Citrus Sinensis ID: 004345
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 760 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SXB8 | 842 | G-type lectin S-receptor- | yes | no | 0.957 | 0.864 | 0.465 | 0.0 | |
| Q9SXB4 | 820 | G-type lectin S-receptor- | no | no | 0.968 | 0.897 | 0.434 | 0.0 | |
| Q9LPZ9 | 830 | G-type lectin S-receptor- | no | no | 0.957 | 0.877 | 0.432 | 1e-175 | |
| O81906 | 849 | G-type lectin S-receptor- | no | no | 0.964 | 0.863 | 0.408 | 1e-168 | |
| Q9SY89 | 842 | Putative G-type lectin S- | no | no | 0.964 | 0.870 | 0.400 | 1e-162 | |
| Q9SXB5 | 820 | G-type lectin S-receptor- | no | no | 0.977 | 0.906 | 0.392 | 1e-158 | |
| Q9SYA0 | 804 | G-type lectin S-receptor- | no | no | 0.964 | 0.911 | 0.387 | 1e-154 | |
| O64784 | 821 | G-type lectin S-receptor- | no | no | 0.948 | 0.878 | 0.391 | 1e-153 | |
| O64778 | 807 | G-type lectin S-receptor- | no | no | 0.918 | 0.864 | 0.394 | 1e-152 | |
| O64770 | 804 | G-type lectin S-receptor- | no | no | 0.931 | 0.880 | 0.390 | 1e-150 |
| >sp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/820 (46%), Positives = 506/820 (61%), Gaps = 92/820 (11%)
Query: 25 DTITSSQFIRDPES--IISSGSKFKLGFFSPDGNFTN-RYIGIWYNKGGSANKTVVWVAN 81
D IT S I+D ES ++ F+ GFF+P + T RY+GIWY K +TVVWVAN
Sbjct: 31 DRITFSSPIKDSESETLLCKSGIFRFGFFTPVNSTTRLRYVGIWYEK--IPIQTVVWVAN 88
Query: 82 RNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNI 141
++ P+ D+SG+ +I +DGNL V +G+ ++ WS+NVS + T QL+DSGNL+L DN
Sbjct: 89 KDSPINDTSGVISIYQDGNLAVTDGRNRLVWSTNVSVPVAPNATWVQLMDSGNLMLQDNR 148
Query: 142 SQVSI-WDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPE 200
+ I W+SF+ P D+F M + TD RTG ++LTSW S +PS G+++AG+ FT PE
Sbjct: 149 NNGEILWESFKHPYDSFMPRMTLGTDGRTGGNLKLTSWTSHDDPSTGNYTAGIAPFTFPE 208
Query: 201 VFIWINGTRPYWRSGPWNGRYFIGIPDMNSV-YLDGFNLGEDHQKGTRYLTFAFADNDVF 259
+ IW N P WRSGPWNG+ FIG+P+M+S+ +LDGFNL D+Q GT +++A ND F
Sbjct: 209 LLIWKNNV-PTWRSGPWNGQVFIGLPNMDSLLFLDGFNLNSDNQ-GTISMSYA---NDSF 263
Query: 260 ---FALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFGSCNSQKIPICSCLLG 316
F L P+G + ++ W +I +P DCD YG+CG FGSC++ + P C C+ G
Sbjct: 264 MYHFNLDPEGIIYQKDWSTSMRTWRIGVKFPYTDCDAYGRCGRFGSCHAGENPPCKCVKG 323
Query: 317 FEPKNAEDWNRGNWSGGEVEG------------------KQDGFFKLETMKVPYFAERSS 358
F PKN +WN GNWS G + K DGF KL+ MKVP AERS
Sbjct: 324 FVPKNNTEWNGGNWSNGCMRKAPLQCERQRNVSNGGGGGKADGFLKLQKMKVPISAERSE 383
Query: 359 ANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNLYIRVAHEELDRKD 418
A+E C C +NCSC AYAY+ G+GCM+W+ +L+D++ G +L+IRVAH EL
Sbjct: 384 ASEQVCPKVCLDNCSCTAYAYDRGIGCMLWSGDLVDMQSFLGSGIDLFIRVAHSELKTHS 443
Query: 419 MKLVIILSVIVGIIAIA-ICTFFAWRWFAKRKA-MKENSKVQRLDLGEAYANFSTEKVNP 476
V+I + ++G++ IA +C A R + KR A K+ S EA + + N
Sbjct: 444 NLAVMIAAPVIGVMLIAAVCVLLACRKYKKRPAPAKDRSAELMFKRMEALTSDNESASNQ 503
Query: 477 ARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQE 536
+L++L +F F+ LA +T++F L NKLGQGGFGPVYKGKL +GQEIAVKRLS+ SGQG E
Sbjct: 504 IKLKELPLFEFQVLATSTDSFSLRNKLGQGGFGPVYKGKLPEGQEIAVKRLSRKSGQGLE 563
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVEREENML-------------IYEYMPNKSLD---- 579
E MNEV+VIS LQHRNLV+LLGCC+E EE ML +++ M K LD
Sbjct: 564 ELMNEVVVISKLQHRNLVKLLGCCIEGEERMLVYEYMPKKSLDAYLFDPMKQKILDWKTR 623
Query: 580 ---------SFLF------------------------------DFGLARIFGGNQDQAAT 600
L+ DFGLARIF N+D+A T
Sbjct: 624 FNIMEGICRGLLYLHRDSRLKIIHRDLKASNILLDENLNPKISDFGLARIFRANEDEANT 683
Query: 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWK 660
+R+VGTYGYMSPEYAMEG FSEKSDVFS GV+ LEI+SGR+N+S + EE L LL YAWK
Sbjct: 684 RRVVGTYGYMSPEYAMEGFFSEKSDVFSLGVIFLEIISGRRNSSSHKEENNLNLLAYAWK 743
Query: 661 LWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720
LWND L DP + + F+ EI +CV++GLLCVQE DRPN+ V+ ML +E L
Sbjct: 744 LWNDGEAASLADPAVFDKCFEKEIEKCVHIGLLCVQEVANDRPNVSNVIWMLTTENMSLA 803
Query: 721 AAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
KQPAF VRRGA + A SS+Q+ Q SINDV++T + GR
Sbjct: 804 DPKQPAFIVRRGASE-AESSDQSSQKVSINDVSLTAVTGR 842
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9SXB4|Y1130_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana GN=At1g11300 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/829 (43%), Positives = 508/829 (61%), Gaps = 93/829 (11%)
Query: 6 IVVLLSSCFYSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIW 65
+ +L+ SCF+ + A + S + D E+I+SS F+ GFFSP N T+RY GIW
Sbjct: 11 VCILVLSCFF--LSVSLAQERAFFSGKLNDSETIVSSFRTFRFGFFSPV-NSTSRYAGIW 67
Query: 66 YNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNT 125
YN + +TV+WVAN++KP+ DSSG+ ++S+DGNLVV +G+++V WS+NVS+ A+ ++T
Sbjct: 68 YNS--VSVQTVIWVANKDKPINDSSGVISVSQDGNLVVTDGQRRVLWSTNVSTQASANST 125
Query: 126 RAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGK-KVQLTSWRSLSNP 184
A+LLDSGNLVL + S +W+SF+ PTD++ M V T+ R G V +TSW+S S+P
Sbjct: 126 VAELLDSGNLVLKEASSDAYLWESFKYPTDSWLPNMLVGTNARIGGGNVTITSWKSPSDP 185
Query: 185 SIGSFSAGLDSFTIPEVFIWINGTR--PYWRSGPWNGRYFIGIPDMNS-VYLDGFNLGED 241
S GS++A L PE+FI N WRSGPWNG+ F G+PD+ + V+L F + +D
Sbjct: 186 SPGSYTAALVLAAYPELFIMNNNNNNSTVWRSGPWNGQMFNGLPDVYAGVFLYRFIVNDD 245
Query: 242 HQKGTRYLTFAFADNDVFFALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFG 301
G+ +++A +F + +G++ R W + + + + P +CD Y +CG F
Sbjct: 246 -TNGSVTMSYANDSTLRYFYMDYRGSVIRRDWSETRRNWTVGLQVPATECDNYRRCGEFA 304
Query: 302 SCNSQKIPICSCLLGFEPKNAEDWNRGNWSGGEVE------------GKQDGFFKLETMK 349
+CN +K P+CSC+ GF P+N +WN GNWSGG G DGF +L MK
Sbjct: 305 TCNPRKNPLCSCIRGFRPRNLIEWNNGNWSGGCTRRVPLQCERQNNNGSADGFLRLRRMK 364
Query: 350 VPYFAERSSANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNLYIRV 409
+P FA RS A+E +C C CSC A A+ +G GCMIW +L+D ++L + G +LYIR+
Sbjct: 365 LPDFARRSEASEPECLRTCLQTCSCIAAAHGLGYGCMIWNGSLVDSQELSASGLDLYIRL 424
Query: 410 AHEELDRKDMKLVIILSVIVG-IIAIAICTFFAWRWFAKRKAMKENSKVQRL-DLGEAYA 467
AH E+ KD + ++I +++ G I +A C A R K++A K+ +++ + EA A
Sbjct: 425 AHSEIKTKDKRPILIGTILAGGIFVVAACVLLARRIVMKKRAKKKGRDAEQIFERVEALA 484
Query: 468 NFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRL 527
N +L++L +F F+ LA ATNNF L NKLGQGGFGPVYKGKLQ+GQEIAVKRL
Sbjct: 485 GG-----NKGKLKELPLFEFQVLAAATNNFSLRNKLGQGGFGPVYKGKLQEGQEIAVKRL 539
Query: 528 SKASGQGQEEFMNEVMVISNLQHRNLV-----------RLL------------------- 557
S+ASGQG EE +NEV+VIS LQHRNLV R+L
Sbjct: 540 SRASGQGLEELVNEVVVISKLQHRNLVKLLGCCIAGEERMLVYEFMPKKSLDYYLFDSRR 599
Query: 558 --------------GCC-----VEREENMLIYE-------YMPNKSLDSFLFDFGLARIF 591
G C + R+ + I + +++L + DFGLARIF
Sbjct: 600 AKLLDWKTRFNIINGICRGLLYLHRDSRLRIIHRDLKASNILLDENLIPKISDFGLARIF 659
Query: 592 GGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFE 651
GN+D+A T+R+VGTYGYM+PEYAM G FSEKSDVFS GV+LLEI+SGR+N++
Sbjct: 660 PGNEDEANTRRVVGTYGYMAPEYAMGGLFSEKSDVFSLGVILLEIISGRRNSNS------ 713
Query: 652 LTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711
TLL Y W +WN+ + LVDP I + F+ EI +C+++GLLCVQE DRP++ TV SM
Sbjct: 714 -TLLAYVWSIWNEGEINSLVDPEIFDLLFEKEIHKCIHIGLLCVQEAANDRPSVSTVCSM 772
Query: 712 LNSEIKDLPAAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
L+SEI D+P KQPAF R ++ SS N + + SIN+VT+T + GR
Sbjct: 773 LSSEIADIPEPKQPAFISRNNVPEAESSENSDLKD-SINNVTITDVTGR 820
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LPZ9|SD113_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana GN=SD113 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 615 bits (1585), Expect = e-175, Method: Compositional matrix adjust.
Identities = 355/820 (43%), Positives = 488/820 (59%), Gaps = 92/820 (11%)
Query: 23 ATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANR 82
ATD IT S RD E+++S+ S F+ GFFSP N T RY GIW+N +TVVWVAN
Sbjct: 21 ATDVITFSSEFRDSETVVSNHSTFRFGFFSPV-NSTGRYAGIWFNN--IPVQTVVWVANS 77
Query: 83 NKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVL--HDN 140
N P+ DSSG+ +IS++GNLVV++G+ QVHWS+NV + A+LL++GNLVL N
Sbjct: 78 NSPINDSSGMVSISKEGNLVVMDGRGQVHWSTNVLVPVAANTFYARLLNTGNLVLLGTTN 137
Query: 141 ISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPE 200
+W+SF+ P + + M ++TD +TG+ ++L SW+S +PS G +SAGL PE
Sbjct: 138 TGDEILWESFEHPQNIYLPTMSLATDTKTGRSLKLRSWKSPFDPSPGRYSAGLIPLPFPE 197
Query: 201 VFIWINGTRPYWRSGPWNGRYFIGIPDMN-SVYLDGFNLGEDHQKGTRYLTFAFADNDVF 259
+ +W + WRSGPWNG+YFIG+P+M+ + L L D+ +G+ +++A
Sbjct: 198 LVVWKDDLL-MWRSGPWNGQYFIGLPNMDYRINLFELTLSSDN-RGSVSMSYAGNTLLYH 255
Query: 260 FALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFGSC--NSQKIPICSCLLGF 317
F L +G++ +R W K + P+ CD Y CG F SC N P C C+ GF
Sbjct: 256 FLLDSEGSVFQRDWNVAIQEWKTWLKVPSTKCDTYATCGQFASCRFNPGSTPPCMCIRGF 315
Query: 318 EPKNAEDWNRGNWSGGEVEG---------------KQDGFFKLETMKVPYFAERSSANED 362
+P++ +WN GNW+ G V K DGF +++ MKVP+ +RS ANE
Sbjct: 316 KPQSYAEWNNGNWTQGCVRKAPLQCESRDNNDGSRKSDGFVRVQKMKVPHNPQRSGANEQ 375
Query: 363 KCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNLYIRVAHEELD-RKDMKL 421
C + C NCSC AY+++ G+GC++W+ NL+D+++ G YIR+A E R + +
Sbjct: 376 DCPESCLKNCSCTAYSFDRGIGCLLWSGNLMDMQEFSGTGVVFYIRLADSEFKKRTNRSI 435
Query: 422 VIILSVIVGIIAIAICTFFAWRWFAKRKAMKENSKVQRLDLGEAYANFSTEKV-----NP 476
VI ++++VG A A AK + N+++ L E S+ V N
Sbjct: 436 VITVTLLVGAFLFAGTVVLALWKIAKHREKNRNTRL----LNERMEALSSNDVGAILVNQ 491
Query: 477 ARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQE 536
+L++L +F F+ LA ATNNF + NKLGQGGFG VYKG+LQ+G +IAVKRLS+ SGQG E
Sbjct: 492 YKLKELPLFEFQVLAVATNNFSITNKLGQGGFGAVYKGRLQEGLDIAVKRLSRTSGQGVE 551
Query: 537 EFMNEVMVISNLQHRNLVRLLGCCVERE----------ENML-IYEYMP----------- 574
EF+NEV+VIS LQHRNLVRLLG C+E E EN L Y + P
Sbjct: 552 EFVNEVVVISKLQHRNLVRLLGFCIEGEERMLVYEFMPENCLDAYLFDPVKQRLLDWKTR 611
Query: 575 ----------------------------------NKSLDSFLFDFGLARIFGGNQDQAAT 600
+++L+ + DFGLARIF GN+D+ +T
Sbjct: 612 FNIIDGICRGLMYLHRDSRLKIIHRDLKASNILLDENLNPKISDFGLARIFQGNEDEVST 671
Query: 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWK 660
R+VGTYGYM+PEYAM G FSEKSDVFS GV+LLEIVSGR+N+SFY++ L YAWK
Sbjct: 672 VRVVGTYGYMAPEYAMGGLFSEKSDVFSLGVILLEIVSGRRNSSFYNDGQNPNLSAYAWK 731
Query: 661 LWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720
LWN I LVDP+I E F+ EI RCV+VGLLCVQ+ DRP++ TV+ ML+SE +LP
Sbjct: 732 LWNTGEDIALVDPVIFEECFENEIRRCVHVGLLCVQDHANDRPSVATVIWMLSSENSNLP 791
Query: 721 AAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
KQPAF RRG + SS Q+ SIN+V++T + GR
Sbjct: 792 EPKQPAFIPRRGTSE-VESSGQSDPRASINNVSLTKITGR 830
|
Receptor-like serine/threonine-protein kinase that represses the disease resistance signaling pathway triggered in response to bacterial pathogen such as Pseudomonas syringae pv. tomato. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 591 bits (1524), Expect = e-168, Method: Compositional matrix adjust.
Identities = 343/840 (40%), Positives = 482/840 (57%), Gaps = 107/840 (12%)
Query: 18 FGTATATDTITSSQFIRD---PESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANK 74
+ ++ A +TI + +RD + ++S F+LGFFSP G+ T+R++GIWY G +K
Sbjct: 20 YESSMAANTIRRGESLRDGINHKPLVSPQKTFELGFFSP-GSSTHRFLGIWY--GNIEDK 76
Query: 75 TVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNV-SSLANNSNTRAQLLDSG 133
VVWVANR P+ D SG+ IS DGNLV+L+GK WSSN+ SS NN+N + D+G
Sbjct: 77 AVVWVANRATPISDQSGVLMISNDGNLVLLDGKNITVWSSNIESSTTNNNNRVVSIHDTG 136
Query: 134 NLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPSIGSFSAGL 193
N VL + + IW+SF PTDTF +M+V + +TG SWRS ++PS G++S G+
Sbjct: 137 NFVLSETDTDRPIWESFNHPTDTFLPQMRVRVNPQTGDNHAFVSWRSETDPSPGNYSLGV 196
Query: 194 DSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSV--YLDGFNLGED-HQKGTRYLT 250
D PE+ +W WRSG WN F GIP+M+ + YL GF L + G+ Y T
Sbjct: 197 DPSGAPEIVLWEGNKTRKWRSGQWNSAIFTGIPNMSLLTNYLYGFKLSSPPDETGSVYFT 256
Query: 251 FAFADNDVF--FALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFGSCNSQ-K 307
+ +D V F + G EE W + + P ++CD Y +CG FG C+ +
Sbjct: 257 YVPSDPSVLLRFKVLYNGTEEELRWNETLKKWTKFQSEPDSECDQYNRCGKFGICDMKGS 316
Query: 308 IPICSCLLGFEPKNAEDWNRG-----------NWSGGEVEGKQDGFFKLETMKVPYF--A 354
ICSC+ G+E + +W+RG N S GE D F L+++K+P F
Sbjct: 317 NGICSCIHGYEQVSVGNWSRGCRRRTPLKCERNISVGE-----DEFLTLKSVKLPDFEIP 371
Query: 355 ERSSANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNLYIRVAHEEL 414
E + + + C+++C NCSC AY+ G+GCMIW +L+D+++ +GG++L+IR+A E+
Sbjct: 372 EHNLVDPEDCRERCLRNCSCNAYSLVGGIGCMIWNQDLVDLQQFEAGGSSLHIRLADSEV 431
Query: 415 -DRKDMKLVIILSVIVGIIAIAICTFFAWRWFAKRKAMKENSKVQRLDLGEAYANFSTEK 473
+ + K+ +I++V+VG+I I I WR F ++K + + D A+ + K
Sbjct: 432 GENRKTKIAVIVAVLVGVILIGIFALLLWR-FKRKKDVSGAYCGKNTDTSVVVADLTKSK 490
Query: 474 VNPARLQ---------------DLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQD 518
+ +L VF+ +A ATN+F N+LG+GGFGPVYKG L+D
Sbjct: 491 ETTSAFSGSVDIMIEGKAVNTSELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLED 550
Query: 519 GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL 578
G+EIAVKRLS SGQG +EF NE+++I+ LQHRNLVRLLGCC E EE ML+YEYMPNKSL
Sbjct: 551 GREIAVKRLSGKSGQGVDEFKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKSL 610
Query: 579 DSFLFD----------------FGLAR--------------------------------- 589
D FLFD G+AR
Sbjct: 611 DFFLFDETKQALIDWKLRFSIIEGIARGLLYLHRDSRLRIIHRDLKVSNVLLDAEMNPKI 670
Query: 590 -------IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKN 642
IFGGNQ++A T R+VGTYGYMSPEYAMEG FS KSDV+SFGVLLLEIVSG++N
Sbjct: 671 SDFGMARIFGGNQNEANTVRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGKRN 730
Query: 643 TSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDR 702
TS E +L+GYAW L+ +LVDP I + K E +RC++V +LCVQ+ +R
Sbjct: 731 TSLRSSEHG-SLIGYAWYLYTHGRSEELVDPKIRVTCSKREALRCIHVAMLCVQDSAAER 789
Query: 703 PNMPTVVSMLNSEIKDLPAAKQPAFT-VRRGAYDSASSSNQNQQ-ICSINDVTVTLMEGR 760
PNM +V+ ML S+ L A +QP FT RR + D + + +QQ I S N++T T++ GR
Sbjct: 790 PNMASVLLMLESDTATLAAPRQPTFTSTRRNSIDVNFALDSSQQYIVSSNEITSTVVLGR 849
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SY89|Y1661_ARATH Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana GN=At1g61610 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 573 bits (1477), Expect = e-162, Method: Compositional matrix adjust.
Identities = 331/826 (40%), Positives = 468/826 (56%), Gaps = 93/826 (11%)
Query: 20 TATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWV 79
+ + +++ T + IR+ +S+IS F+LGFF+P N T RY+GIWY +TVVWV
Sbjct: 25 SCSTSNSFTRNHTIREGDSLISEDESFELGFFTPK-NSTLRYVGIWYKN--IEPQTVVWV 81
Query: 80 ANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVL-H 138
ANR KPL+D G I++DGNLV++NG+ + WS+NV +NN T A L +G+LVL
Sbjct: 82 ANREKPLLDHKGALKIADDGNLVIVNGQNETIWSTNVEPESNN--TVAVLFKTGDLVLCS 139
Query: 139 DNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSFTI 198
D+ + W+SF PTDTF M+V + G+ W+S S+PS G +S G+D
Sbjct: 140 DSDRRKWYWESFNNPTDTFLPGMRVRVNPSLGENRAFIPWKSESDPSPGKYSMGIDPVGA 199
Query: 199 PEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSV--YLDGFNLGEDHQK-GTRYLTFAFAD 255
E+ IW G + WRSGPWN F GIPDM Y+ GF L + G+ Y T+ +D
Sbjct: 200 LEIVIW-EGEKRKWRSGPWNSAIFTGIPDMLRFTNYIYGFKLSSPPDRDGSVYFTYVASD 258
Query: 256 NDVF--FALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFGSCNSQK---IPI 310
+ F F + P G E+ W + + + P+ +C+ Y +CG + C+ K
Sbjct: 259 SSDFLRFWIRPDGVEEQFRWNKDIRNWNLLQWKPSTECEKYNRCGNYSVCDDSKEFDSGK 318
Query: 311 CSCLLGFEPKNAEDWNRGNWSGG------------EVEGKQDGFFKLETMKVPYFAERS- 357
CSC+ GFEP + + WN ++SGG V G++DGF L+ +KVP F
Sbjct: 319 CSCIDGFEPVHQDQWNNRDFSGGCQRRVPLNCNQSLVAGQEDGFTVLKGIKVPDFGSVVL 378
Query: 358 SANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNLYIRVAHEELD-- 415
N + CKD C+ +CSCKAYA +G+GCMIWT +LID+ GG ++ IR+A +L
Sbjct: 379 HNNSETCKDVCARDCSCKAYALVVGIGCMIWTRDLIDMEHFERGGNSINIRLAGSKLGGG 438
Query: 416 RKDMKLVIILSVIVGIIAIAICTFFAWRWFAKRKAM---KENSKVQRLDLGEAYANFSTE 472
+++ L II+ ++G + +C + W++ KA K++ V + Y++ +
Sbjct: 439 KENSTLWIIVFSVIGAFLLGLCIWILWKFKKSLKAFLWKKKDITVSDIIENRDYSSSPIK 498
Query: 473 KV--NPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKA 530
+ + DL +F+F+ +A+AT +F NKLGQGGFG VYKG +G+EIAVKRLS
Sbjct: 499 VLVGDQVDTPDLPIFSFDSVASATGDFAEENKLGQGGFGTVYKGNFSEGREIAVKRLSGK 558
Query: 531 SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD------ 584
S QG EEF NE+++I+ LQHRNLVRLLGCC+E E ML+YEYMPNKSLD FLFD
Sbjct: 559 SKQGLEEFKNEILLIAKLQHRNLVRLLGCCIEDNEKMLLYEYMPNKSLDRFLFDESKQGS 618
Query: 585 ----------FGLAR----------------------------------------IFGGN 594
G+AR IF
Sbjct: 619 LDWRKRWEVIGGIARGLLYLHRDSRLKIIHRDLKASNILLDTEMNPKISDFGMARIFNYR 678
Query: 595 QDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTL 654
QD A T R+VGTYGYM+PEYAMEG FSEKSDV+SFGVL+LEIVSGRKN SF + +L
Sbjct: 679 QDHANTIRVVGTYGYMAPEYAMEGIFSEKSDVYSFGVLILEIVSGRKNVSFRGTDHG-SL 737
Query: 655 LGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714
+GYAW LW+ +++DP++ ++ E +RC++VG+LC Q+ V RPNM +V+ ML S
Sbjct: 738 IGYAWHLWSQGKTKEMIDPIVKDTRDVTEAMRCIHVGMLCTQDSVIHRPNMGSVLLMLES 797
Query: 715 EIKDLPAAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
+ LP +QP F + D + + + S+NDVT T + GR
Sbjct: 798 QTSQLPPPRQPTFHSFLNSGDIELNFD-GHDVASVNDVTFTTIVGR 842
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SXB5|Y1135_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11305 OS=Arabidopsis thaliana GN=At1g11305 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 560 bits (1444), Expect = e-158, Method: Compositional matrix adjust.
Identities = 326/830 (39%), Positives = 475/830 (57%), Gaps = 87/830 (10%)
Query: 2 ISVAIVVLLSSCFYSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRY 61
+S + VL SCF+ + A + S + D E+I+SS F+ GFFSP N TNRY
Sbjct: 7 LSPIVHVLSLSCFF--LSVSLAHERALFSGTLNDSETIVSSFRTFRFGFFSPV-NSTNRY 63
Query: 62 IGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLAN 121
GIWYN +TV+WVAN++ P+ DSSG+ +ISEDGNLVV +G+++V WS+NVS+ A+
Sbjct: 64 AGIWYNS--IPVQTVIWVANKDTPINDSSGVISISEDGNLVVTDGQRRVLWSTNVSTRAS 121
Query: 122 NSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGK-KVQLTSWRS 180
++T A+LL+SGNLVL D + +W+SF+ PTD++ M V T+ RTG + +TSW +
Sbjct: 122 ANSTVAELLESGNLVLKDANTDAYLWESFKYPTDSWLPNMLVGTNARTGGGNITITSWTN 181
Query: 181 LSNPSIGSFSAGLDSFTIPEVFIWING--TRPYWRSGPWNGRYFIGIPDM-NSVYLDGFN 237
S+PS GS++A L PE+FI+ N WRSGPWNG F G+PD+ ++L F
Sbjct: 182 PSDPSPGSYTAALVLAPYPELFIFNNNDNNATVWRSGPWNGLMFNGLPDVYPGLFLYRFK 241
Query: 238 LGEDHQKGTRYLTFAFADNDVFFALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKC 297
+ +D G+ +++A L +G R W + + + + P +CD+Y +C
Sbjct: 242 VNDD-TNGSATMSYANDSTLRHLYLDYRGFAIRRDWSEARRNWTLGSQVPATECDIYSRC 300
Query: 298 GAFGSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGGEV------------EGKQDGFFKL 345
G + +CN +K P CSC+ GF P+N +WN GNWSGG + +G D F KL
Sbjct: 301 GQYTTCNPRKNPHCSCIKGFRPRNLIEWNNGNWSGGCIRKLPLQCERQNNKGSADRFLKL 360
Query: 346 ETMKVPYFAERSSANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNL 405
+ MK+P FA RS A+E +C C +CSC A+A+ +G GCMIW +L+D + L + G +L
Sbjct: 361 QRMKMPDFARRSEASEPECFMTCLQSCSCIAFAHGLGYGCMIWNRSLVDSQVLSASGMDL 420
Query: 406 YIRVAHEELDRKDMKLVII-LSVIVGIIAIAICTFFAWRWFAKRKAMKENSKVQRL-DLG 463
IR+AH E +D + ++I S+ GI +A C A R K++A K+ + +++
Sbjct: 421 SIRLAHSEFKTQDRRPILIGTSLAGGIFVVATCVLLARRIVMKKRAKKKGTDAEQIFKRV 480
Query: 464 EAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIA 523
EA A S EK L++L +F F+ LA AT+NF L+NKLGQGGFGPVYKG L +GQEIA
Sbjct: 481 EALAGGSREK-----LKELPLFEFQVLATATDNFSLSNKLGQGGFGPVYKGMLLEGQEIA 535
Query: 524 VKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLF 583
VKRLS+ASGQG EE + EV+VIS LQHRNLV+L GCC+ EE ML+YE+MP KSLD ++F
Sbjct: 536 VKRLSQASGQGLEELVTEVVVISKLQHRNLVKLFGCCIAGEERMLVYEFMPKKSLDFYIF 595
Query: 584 DFGLARIFGGN--------------------------QDQAATKRL--------VGTYGY 609
D A++ N +D A+ L + +G
Sbjct: 596 DPREAKLLDWNTRFEIINGICRGLLYLHRDSRLRIIHRDLKASNILLDENLIPKISDFGL 655
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLG------------- 656
E + + V ++G + E G + E+ ++ LG
Sbjct: 656 ARIFPGNEDEANTRRVVGTYGYMAPEYAMG----GLFSEKSDVFSLGVILLEIISGRRNS 711
Query: 657 ------YAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710
+ W +WN+ + +VDP I + F+ EI +CV++ LLCVQ+ DRP++ TV
Sbjct: 712 HSTLLAHVWSIWNEGEINGMVDPEIFDQLFEKEIRKCVHIALLCVQDAANDRPSVSTVCM 771
Query: 711 MLNSEIKDLPAAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
ML+SE+ D+P KQPAF R ++ S + + SIN+VT+T + GR
Sbjct: 772 MLSSEVADIPEPKQPAFMPRNVGLEAEFSESIALK-ASINNVTITDVSGR 820
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SYA0|Y1150_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61500 OS=Arabidopsis thaliana GN=At1g61500 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 544 bits (1402), Expect = e-154, Method: Compositional matrix adjust.
Identities = 322/831 (38%), Positives = 468/831 (56%), Gaps = 98/831 (11%)
Query: 1 MISVAIVVLLSSCFYSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNR 60
M++ + L + F + +++ IT+ + +++ S+ ++LGFFSP+ N ++
Sbjct: 1 MMTRFACLHLFTMFLFTLLSGSSSAVITTESPLSMGQTLSSANEVYELGFFSPN-NTQDQ 59
Query: 61 YIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLA 120
Y+GIW+ + + VVWVANR KP+ DS+ IS G+L++LNGK WSS V+
Sbjct: 60 YVGIWFKD--TIPRVVVWVANREKPVTDSTAYLAISSSGSLLLLNGKHGTVWSSGVT--F 115
Query: 121 NNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRS 180
++S RA+L DSGNL + DN+S+ ++W SF DT ++ +L T +K LTSW+S
Sbjct: 116 SSSGCRAELSDSGNLKVIDNVSERALWQSFDHLGDTLLHTSSLTYNLATAEKRVLTSWKS 175
Query: 181 LSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGE 240
++PS G F G + +P + G+ PYWRSGPW F GIP M+ Y F L +
Sbjct: 176 YTDPSPGDF-LGQITPQVPSQGFVMRGSTPYWRSGPWAKTRFTGIPFMDESYTGPFTLHQ 234
Query: 241 DHQKGTRYLTFAFADNDVF-FALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGA 299
D G+ YLT+ D + LT +G++ + + D ++Y+ P CD YG CG
Sbjct: 235 D-VNGSGYLTYFQRDYKLSRITLTSEGSI--KMFRDNGMGWELYYEAPKKLCDFYGACGP 291
Query: 300 FGSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGGEVEGKQ------------DGFFKLET 347
FG C P+C C GF PK+ E+W RGNW+GG V + D F ++
Sbjct: 292 FGLCVMSPSPMCKCFRGFVPKSVEEWKRGNWTGGCVRHTELDCLGNSTGEDADDFHQIAN 351
Query: 348 MKVPYFAE-RSSANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNLY 406
+K P F E SS N ++C +C +NCSC A+AY G+GC++W +L+D + + G L
Sbjct: 352 IKPPDFYEFASSVNAEECHQRCVHNCSCLAFAYIKGIGCLVWNQDLMDAVQFSATGELLS 411
Query: 407 IRVAHEELDRKDMKLVIILSVIVGIIAIAICTFFAWR-WFAKRKAMKENSKVQRLDLGEA 465
IR+A ELD K I+ S IV + I F A+ W + + + SK +A
Sbjct: 412 IRLARSELDGNKRKKTIVAS-IVSLTLFMILGFTAFGVWRCRVEHIAHISK-------DA 463
Query: 466 YANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVK 525
+ N + P + L F+ + NATNNF L+NKLGQGGFG VYKGKLQDG+EIAVK
Sbjct: 464 WKN----DLKPQDVPGLDFFDMHTIQNATNNFSLSNKLGQGGFGSVYKGKLQDGKEIAVK 519
Query: 526 RLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDF 585
RLS +SGQG+EEFMNE+++IS LQHRNLVR+LGCC+E EE +LIYE+M NKSLD+FLFD
Sbjct: 520 RLSSSSGQGKEEFMNEIVLISKLQHRNLVRVLGCCIEEEEKLLIYEFMVNKSLDTFLFDS 579
Query: 586 ----------------GLAR---------------------------------------- 589
G+AR
Sbjct: 580 RKRLEIDWPKRFDIIQGIARGLLYLHHDSRLRVIHRDLKVSNILLDEKMNPKISDFGLAR 639
Query: 590 IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEE 649
++ G + Q T+R+VGT GYMSPEYA G FSEKSD++SFGVL+LEI+SG K + F +
Sbjct: 640 MYQGTEYQDNTRRVVGTLGYMSPEYAWTGMFSEKSDIYSFGVLMLEIISGEKISRFSYGV 699
Query: 650 FELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVV 709
TL+ YAW+ W++ IDL+D +++S +E+ RC+ +GLLCVQ DRPN ++
Sbjct: 700 EGKTLIAYAWESWSEYRGIDLLDQDLADSCHPLEVGRCIQIGLLCVQHQPADRPNTLELL 759
Query: 710 SMLNSEIKDLPAAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
+ML + DLP+ KQP F A+ + + + + ++N +T +++ GR
Sbjct: 760 AMLTT-TSDLPSPKQPTF-----AFHTRDDESLSNDLITVNGMTQSVILGR 804
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O64784|Y1136_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61360 OS=Arabidopsis thaliana GN=At1g61360 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 542 bits (1397), Expect = e-153, Method: Compositional matrix adjust.
Identities = 321/820 (39%), Positives = 457/820 (55%), Gaps = 99/820 (12%)
Query: 2 ISVAIVVLLSSCFYSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRY 61
+ + +LL + +S +G A IT+S + ++ S G ++LGFFS + N N+Y
Sbjct: 1 MRIVACLLLITALFSSYGYAA----ITTSSPLSIGVTLSSPGGSYELGFFSSN-NSGNQY 55
Query: 62 IGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLAN 121
+GIW+ K + +VWVANR KP+ + TIS +G+L++L+ KK + WSS +N
Sbjct: 56 VGIWFKK--VTPRVIVWVANREKPVSSTMANLTISSNGSLILLDSKKDLVWSSGGDPTSN 113
Query: 122 NSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSL 181
RA+LLD+GNLV+ DN++ +W SF+ DT + D+ KK LTSW+S
Sbjct: 114 K--CRAELLDTGNLVVVDNVTGNYLWQSFEHLGDTMLPLTSLMYDIPNNKKRVLTSWKSE 171
Query: 182 SNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGED 241
++PS G F A + +P + G+ PYWRSGPW G F GIP+M++ Y++ + +D
Sbjct: 172 TDPSPGEFVAEITP-QVPSQGLIRKGSSPYWRSGPWAGTRFTGIPEMDASYVNPLGMVQD 230
Query: 242 HQKGTRYLTFAFADN--DVFFALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGA 299
GT F N + LTP+G+L R + +F P CD+YG+CG
Sbjct: 231 EVNGTGVFAFCVLRNFNLSYIKLTPEGSL--RITRNNGTDWIKHFEGPLTSCDLYGRCGP 288
Query: 300 FGSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGG---------------EVEGK-QDGFF 343
FG C P+C CL GFEPK+ E+W GNWS G E +GK +D F+
Sbjct: 289 FGLCVRSGTPMCQCLKGFEPKSDEEWRSGNWSRGCVRRTNLSCQGNSSVETQGKDRDVFY 348
Query: 344 KLETMKVPYFAERSS-ANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGG 402
+ +K P E +S +NE++C C NCSC A++Y G+GC++W L+D K GG
Sbjct: 349 HVSNIKPPDSYELASFSNEEQCHQGCLRNCSCTAFSYVSGIGCLVWNQELLDTVKFIGGG 408
Query: 403 TNLYIRVAHEELD-RKDMKLVIILSVIVGIIAIAICTFFA-WRWFAKRKAMKENSKVQRL 460
L +R+AH EL RK +K++ + ++ + + I + WR+ K+ +S V +
Sbjct: 409 ETLSLRLAHSELTGRKRIKIITVATLSLSVCLILVLVACGCWRYRVKQNG---SSLVSKD 465
Query: 461 DLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQ 520
++ A+ + + + L F +L ATNNF + NKLGQGGFG VYKGKLQDG+
Sbjct: 466 NVEGAWKS----DLQSQDVSGLNFFEIHDLQTATNNFSVLNKLGQGGFGTVYKGKLQDGK 521
Query: 521 EIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL-- 578
EIAVKRL+ +S QG EEFMNE+ +IS LQHRNL+RLLGCC++ EE +L+YEYM NKSL
Sbjct: 522 EIAVKRLTSSSVQGTEEFMNEIKLISKLQHRNLLRLLGCCIDGEEKLLVYEYMVNKSLDI 581
Query: 579 --------------------------------DSFL----------------------FD 584
DSFL D
Sbjct: 582 FIFDLKKKLEIDWATRFNIIQGIARGLLYLHRDSFLRVVHRDLKVSNILLDEKMNPKISD 641
Query: 585 FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTS 644
FGLAR+F GNQ Q +T +VGT GYMSPEYA G FSEKSD++SFGVL+LEI++G++ +S
Sbjct: 642 FGLARLFHGNQHQDSTGSVVGTLGYMSPEYAWTGTFSEKSDIYSFGVLMLEIITGKEISS 701
Query: 645 FYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF--KMEIIRCVNVGLLCVQEFVKDR 702
F + + LL YAW W++N ++L+D + +S +E RCV++GLLCVQ DR
Sbjct: 702 FSYGKDNKNLLSYAWDSWSENGGVNLLDQDLDDSDSVNSVEAGRCVHIGLLCVQHQAIDR 761
Query: 703 PNMPTVVSMLNSEIKDLPAAKQPAFTVRRGAYDSASSSNQ 742
PN+ V+SML S DLP QP F + DS+ S +Q
Sbjct: 762 PNIKQVMSMLTS-TTDLPKPTQPMFVLETSDEDSSLSHSQ 800
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O64778|Y1142_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61420 OS=Arabidopsis thaliana GN=At1g61420 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 538 bits (1387), Expect = e-152, Method: Compositional matrix adjust.
Identities = 315/798 (39%), Positives = 450/798 (56%), Gaps = 100/798 (12%)
Query: 37 ESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTIS 96
+++ SS ++LGFF+ + N N+Y+GIW+ G + VVWVANR KP+ DS+ IS
Sbjct: 36 QTLSSSNGFYELGFFNFN-NSQNQYVGIWFK--GIIPRVVVWVANREKPVTDSTANLAIS 92
Query: 97 EDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDT 156
+G+L++ NGK V WSS + ++N S RA+L D+GNL++ DN S ++W SF DT
Sbjct: 93 NNGSLLLFNGKHGVAWSSGEALVSNGS--RAELSDTGNLIVIDNFSGRTLWQSFDHLGDT 150
Query: 157 FYSEMKVSTDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGP 216
+ +L TG+K L+SW+S ++PS+G F + +P + G+ PY+RSGP
Sbjct: 151 MLPSSTLKYNLATGEKQVLSSWKSYTDPSVGDFVLQITP-QVPTQVLVTKGSTPYYRSGP 209
Query: 217 WNGRYFIGIPDMNSVYLDGFNLGEDHQKGTRYLTFAFADNDVFFALTPQGNLEERAWVDG 276
W F GIP M+ + ++ +D G+ LT+ ++ + + +E +W +G
Sbjct: 210 WAKTRFTGIPLMDDTFTGPVSVQQD-TNGSGSLTYLNRNDRLQRTMLTSKGTQELSWHNG 268
Query: 277 KAHLKIYFFYPTNDCDVYGKCGAFGSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGGEV- 335
+ + F P + CD YG CG FG C P C+C GF PK E+W RGNW+GG V
Sbjct: 269 TDWV-LNFVAPEHSCDYYGVCGPFGLCVKSVPPKCTCFKGFVPKLIEEWKRGNWTGGCVR 327
Query: 336 ------EGKQDG-----FFKLETMKVPYFAERSS-ANEDKCKDQCSNNCSCKAYAYEIGV 383
+G G F + +K P F E +S N ++C+ C +NCSC A+AY G+
Sbjct: 328 RTELYCQGNSTGKYANVFHPVARIKPPDFYEFASFVNVEECQKSCLHNCSCLAFAYIDGI 387
Query: 384 GCMIWTHNLIDIRKLPSGGTNLYIRVAHEELDRKDMKLVIILSVIVG--IIAIAICTFFA 441
GC++W +L+D + GG L IR+A EL K I S++ ++ IA F
Sbjct: 388 GCLMWNQDLMDAVQFSEGGELLSIRLARSELGGNKRKKAITASIVSLSLVVIIAFVAFCF 447
Query: 442 WRWFAKRKA--MKENSKVQ-RLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQ 498
WR+ K A + S+V R DL P + L F+ + ATNNF
Sbjct: 448 WRYRVKHNADITTDASQVSWRNDL------------KPQDVPGLDFFDMHTIQTATNNFS 495
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
++NKLGQGGFGPVYKGKLQDG+EIAVKRLS +SGQG+EEFMNE+++IS LQH+NLVR+LG
Sbjct: 496 ISNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILG 555
Query: 559 CCVEREENMLIYEYMPNKSLDSFLFDF----------------GLAR------------- 589
CC+E EE +LIYE+M N SLD+FLFD G+AR
Sbjct: 556 CCIEGEEKLLIYEFMLNNSLDTFLFDSRKRLEIDWPKRLDIIQGIARGIHYLHRDSHLKV 615
Query: 590 ---------------------------IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
++ G + Q T+R+VGT GYM+PEYA G FSE
Sbjct: 616 IHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVGTLGYMAPEYAWTGMFSE 675
Query: 623 KSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682
KSD++SFGVL+LEI+SG K + F + + E TL+ YAW+ W D IDL+D +++S +
Sbjct: 676 KSDIYSFGVLMLEIISGEKISRFSYGKEEKTLIAYAWESWCDTGGIDLLDKDVADSCRPL 735
Query: 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAFTVRRGAYDSASSSNQ 742
E+ RCV +GLLCVQ DRPN ++SML + DLP +QP F V R D SSS
Sbjct: 736 EVERCVQIGLLCVQHQPADRPNTLELLSMLTT-TSDLPPPEQPTFVVHR--RDDKSSS-- 790
Query: 743 NQQICSINDVTVTLMEGR 760
+ + ++N++T +++ GR
Sbjct: 791 -EDLITVNEMTKSVILGR 807
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O64770|Y1649_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61490 OS=Arabidopsis thaliana GN=At1g61490 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 533 bits (1373), Expect = e-150, Method: Compositional matrix adjust.
Identities = 314/805 (39%), Positives = 447/805 (55%), Gaps = 97/805 (12%)
Query: 27 ITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPL 86
IT+ + +++ SS ++LGFFSP+ N N Y+GIW+ G + VVWVANR P
Sbjct: 26 ITTESPLSVEQTLSSSNGIYELGFFSPN-NSQNLYVGIWFK--GIIPRVVVWVANRETPT 82
Query: 87 IDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSI 146
D+S IS +G+L++ NGK V WS + +N S RA+L D+GNLV+ DN S ++
Sbjct: 83 TDTSANLAISSNGSLLLFNGKHGVVWSIGENFASNGS--RAELTDNGNLVVIDNASGRTL 140
Query: 147 WDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWIN 206
W+SF+ DT + +L TG+K LTSW++ ++PS G F G + +P + +
Sbjct: 141 WESFEHFGDTMLPFSSLMYNLATGEKRVLTSWKTDTDPSPGVF-VGQITPQVPSQVLIMR 199
Query: 207 GTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDHQKGTRYLTFAFADNDVFFALTPQG 266
G+ Y+R+GPW F GIP M+ Y F+L +D + F + ++ +G
Sbjct: 200 GSTRYYRTGPWAKTRFTGIPLMDDTYASPFSLQQDANGSGFFTYFDRSFKLSRIIISSEG 259
Query: 267 NLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFGSCNSQKIPICSCLLGFEPKNAEDWN 326
++ + + ++ + P N CD+YG CG FG C C CL GF P + E+W
Sbjct: 260 SM--KRFRHNGTDWELSYMAPANSCDIYGVCGPFGLCIVSVPLKCKCLKGFVPHSTEEWK 317
Query: 327 RGNWSGG-------EVEGKQDG-----FFKLETMKVPYFAE-RSSANEDKCKDQCSNNCS 373
RGNW+GG +G G F + +K+P F E SS + ++C C +NCS
Sbjct: 318 RGNWTGGCARLTELHCQGNSTGKDVNIFHPVTNVKLPDFYEYESSVDAEECHQSCLHNCS 377
Query: 374 CKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNLYIRVAHEELD-RKDMKLVIILSVIVGII 432
C A+AY G+GC+IW NL+D + +GG L IR+AH EL K K+++ +V + +
Sbjct: 378 CLAFAYIHGIGCLIWNQNLMDAVQFSAGGEILSIRLAHSELGGNKRNKIIVASTVSLSLF 437
Query: 433 AIAICTFFA-WRWFAKRKAMKENSKVQRLDLGEAYANFSTEKVNPARLQDLLVFNFEELA 491
I F WR+ K KA L +A+ N K P L F +
Sbjct: 438 VILTSAAFGFWRYRVKHKAYT---------LKDAWRNDLKSKEVPG----LEFFEMNTIQ 484
Query: 492 NATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHR 551
ATNNF L+NKLGQGGFG VYKGKLQDG+EIAVK+LS +SGQG+EEFMNE+++IS LQHR
Sbjct: 485 TATNNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKQLSSSSGQGKEEFMNEIVLISKLQHR 544
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDF----------------GLAR------ 589
NLVR+LGCC+E EE +LIYE+M NKSLD+F+FD G+AR
Sbjct: 545 NLVRVLGCCIEGEEKLLIYEFMLNKSLDTFVFDARKKLEVDWPKRFDIVQGIARGLLYLH 604
Query: 590 ----------------------------------IFGGNQDQAATKRLVGTYGYMSPEYA 615
++ G Q Q T+R+VGT GYMSPEYA
Sbjct: 605 RDSRLKVIHRDLKVSNILLDEKMNPKISDFGLARMYEGTQCQDKTRRVVGTLGYMSPEYA 664
Query: 616 MEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675
G FSEKSD++SFGVLLLEI+ G K + F + E TLL YAW+ W + IDL+D +
Sbjct: 665 WTGVFSEKSDIYSFGVLLLEIIIGEKISRFSYGEEGKTLLAYAWESWGETKGIDLLDQDL 724
Query: 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAFTVRRGAYD 735
++S +E+ RCV +GLLCVQ DRPN +++ML + DLP+ KQP F V +
Sbjct: 725 ADSCRPLEVGRCVQIGLLCVQHQPADRPNTLELLAMLTT-TSDLPSPKQPTFVV----HS 779
Query: 736 SASSSNQNQQICSINDVTVTLMEGR 760
S+ ++ + ++N++T +++ GR
Sbjct: 780 RDDESSLSKDLFTVNEMTQSMILGR 804
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 760 | ||||||
| 147774142 | 823 | hypothetical protein VITISV_024545 [Viti | 0.975 | 0.900 | 0.539 | 0.0 | |
| 224114125 | 832 | predicted protein [Populus trichocarpa] | 0.984 | 0.899 | 0.537 | 0.0 | |
| 359496521 | 844 | PREDICTED: G-type lectin S-receptor-like | 0.978 | 0.881 | 0.508 | 0.0 | |
| 224078778 | 831 | predicted protein [Populus trichocarpa] | 0.984 | 0.900 | 0.510 | 0.0 | |
| 224114137 | 827 | predicted protein [Populus trichocarpa] | 0.972 | 0.893 | 0.516 | 0.0 | |
| 147840284 | 827 | hypothetical protein VITISV_016155 [Viti | 0.944 | 0.868 | 0.508 | 0.0 | |
| 224112032 | 824 | predicted protein [Populus trichocarpa] | 0.976 | 0.900 | 0.499 | 0.0 | |
| 224114141 | 824 | predicted protein [Populus trichocarpa] | 0.976 | 0.900 | 0.498 | 0.0 | |
| 356546688 | 1620 | PREDICTED: uncharacterized protein LOC10 | 0.952 | 0.446 | 0.5 | 0.0 | |
| 224076552 | 829 | predicted protein [Populus trichocarpa] | 0.951 | 0.872 | 0.497 | 0.0 |
| >gi|147774142|emb|CAN63401.1| hypothetical protein VITISV_024545 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/836 (53%), Positives = 584/836 (69%), Gaps = 95/836 (11%)
Query: 3 SVAIVVLLSSCFYSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYI 62
SV V LL +CF+ FG +A DTITS+ FIRDPE+I+SSG FKLGFFS DG+ +NRY+
Sbjct: 5 SVRPVSLLLTCFWFVFG-CSAIDTITSTHFIRDPETIVSSGRVFKLGFFSLDGS-SNRYV 62
Query: 63 GIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANN 122
GIWYN ++ T++WVANR++PL DSSG+ TISEDGN+ VLNG+K++ WSSNVS+ A
Sbjct: 63 GIWYNT--TSLLTIIWVANRDRPLNDSSGVLTISEDGNIQVLNGRKEILWSSNVSNPAG- 119
Query: 123 SNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLS 182
N+ AQL DSGNLVL DN + VS+W+S Q P+ +F +MK+ST+ RTG + LTSW+S S
Sbjct: 120 VNSSAQLQDSGNLVLRDN-NGVSVWESLQNPSHSFVPQMKISTNTRTGVRKVLTSWKSSS 178
Query: 183 NPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDH 242
+PS+GSF+AG++ IP+VFIW NG+RPYWRSGPW+G+ G+ D+ + LDG N+ +D
Sbjct: 179 DPSMGSFTAGVEPLNIPQVFIW-NGSRPYWRSGPWDGQILTGV-DVKWITLDGLNIVDD- 235
Query: 243 QKGTRYLTFAFADNDVFFA--LTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAF 300
++GT Y+TFA+ D+ F+A LTP+G L E + + + N+C++YGKCG F
Sbjct: 236 KEGTVYITFAYPDSGFFYAYVLTPEGILVETSRDKRNEDWERVWKTKENECEIYGKCGPF 295
Query: 301 GSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGGEV---------------EGKQDGFFKL 345
G CNS+ PICSCL G+EPK+ ++WNRGNW+GG V E K DGF KL
Sbjct: 296 GHCNSRDSPICSCLKGYEPKHTQEWNRGNWTGGCVRKTPLQCERTKNGSEEAKVDGFLKL 355
Query: 346 ETMKVPYFAERSSANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNL 405
MKVP AE+S A ED C+ QC NCSC AY+Y G+GCM W+ +LIDI+KL S G +L
Sbjct: 356 TNMKVPDLAEQSYALEDDCRQQCLRNCSCIAYSYHTGIGCMWWSGDLIDIQKLSSTGAHL 415
Query: 406 YIRVAHEEL--DRKD-MKLVIILSVIVGIIAIAICTFFAWRWFAKRKAMKENSKVQRLDL 462
+IRVAH EL DRK ++++I++VI+G IAIA+CT+F RW AK++A K K++ + L
Sbjct: 416 FIRVAHSELKQDRKRGARVIVIVTVIIGTIAIALCTYFIRRWIAKQRAKK--GKIEEI-L 472
Query: 463 GEAYANFST-----EKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYK---- 513
FS + VN +L++LL+ +F +L+ ATNNF ANKLGQGGFGPVY+
Sbjct: 473 SFNRGKFSDPSVPGDGVNQVKLEELLLIDFNKLSTATNNFHEANKLGQGGFGPVYRVMMP 532
Query: 514 -------GKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN 566
GKL +GQ+IAVKRLS+AS QG EEFMNEV+VIS LQHRNLVRL+GCC+E +E
Sbjct: 533 VPLDLCEGKLAEGQDIAVKRLSRASTQGLEEFMNEVVVISKLQHRNLVRLIGCCIEGDEK 592
Query: 567 MLIYEYMPNKSLDSFLF------------------------------------------D 584
MLIYE+MPNKSLD+ LF D
Sbjct: 593 MLIYEFMPNKSLDASLFDPVKRQLLDWRTRFKIIEGIGRGLLYLHRDSRLRIIHRDLKAD 652
Query: 585 FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTS 644
FG+ARIFG +QDQA TKR+VGTYGYMSPEYAM+GRFSEKSDVFSFGVLLLEIVSGRKN+S
Sbjct: 653 FGMARIFGSDQDQANTKRVVGTYGYMSPEYAMQGRFSEKSDVFSFGVLLLEIVSGRKNSS 712
Query: 645 FYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPN 704
FYHEE+ TLLGYAWKLW ++N+ L+D + E+ F+ EI+RC++VGLLCVQE KDRP+
Sbjct: 713 FYHEEY-FTLLGYAWKLWKEDNMKTLIDGSMLEACFQEEILRCIHVGLLCVQELAKDRPS 771
Query: 705 MPTVVSMLNSEIKDLPAAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
+ TVV M+ SEI LP KQPAFT R ++ SS + CS+N V++T++EGR
Sbjct: 772 ISTVVGMICSEIAHLPPPKQPAFTEMRSGINTESSDKK----CSLNKVSITMIEGR 823
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224114125|ref|XP_002316674.1| predicted protein [Populus trichocarpa] gi|222859739|gb|EEE97286.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/835 (53%), Positives = 558/835 (66%), Gaps = 87/835 (10%)
Query: 3 SVAIVVLLSSCFYSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYI 62
S+ + L+ CF +FG + DTI+ SQFIRDPE+I+S+G KF+LGFFSP N TNRY+
Sbjct: 8 SIIALHLILYCFCLEFGASI--DTISLSQFIRDPETIVSAGKKFELGFFSP-VNSTNRYV 64
Query: 63 GIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANN 122
IWY+ + T VWVANRNKPL DSSGI TISEDGNLVVLNG+K+ WSSNVS+ N+
Sbjct: 65 AIWYSN--ISITTPVWVANRNKPLNDSSGIMTISEDGNLVVLNGQKETLWSSNVSTGMND 122
Query: 123 SNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLS 182
S RAQL+D GNLVL + + S+W SFQEP+DT+ +M+++ + RTGKK LTSW+S S
Sbjct: 123 S--RAQLMDDGNLVLGGSENGNSLWQSFQEPSDTYIPKMRLTANPRTGKKTPLTSWKSPS 180
Query: 183 NPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDH 242
+PSIGSFS G+D +IPEV +W N +RP WR+GPWNG+ FIG+P+MNSVYLDGFNL +D
Sbjct: 181 DPSIGSFSLGIDPSSIPEVVLW-NDSRPIWRTGPWNGQVFIGVPEMNSVYLDGFNLADDG 239
Query: 243 QKGTRYLTFAFADNDVF--FALTPQGNLEERAWVDGKAHLKIYFFYPTND-CDVYGKCGA 299
G L+ FAD F L+ +G + W D Y + D CDVYGKCG+
Sbjct: 240 NGGFT-LSVGFADESYITNFVLSSEGKFGQVFWDDMNEGSWRYQWESVQDECDVYGKCGS 298
Query: 300 FGSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGGEVE---------------GKQDGFFK 344
F SC+++ PICSCL GFEPKNA++WN NW+ G V GK+DGF K
Sbjct: 299 FASCDAKNTPICSCLKGFEPKNADEWNSRNWTHGCVRRKAMRCERIQNGGELGKEDGFSK 358
Query: 345 LETMKVPYFAERSSA-NEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGT 403
LE +KVP FAE SS+ E KC+D C NNCSC AYAY G+ CM+W NL DI+K SGG
Sbjct: 359 LERVKVPGFAEWSSSITEQKCRDDCWNNCSCIAYAYYTGIYCMLWKGNLTDIKKFSSGGA 418
Query: 404 NLYIRVAHEELDRK--DMKLVIILSVIVGIIAIAICTFFAWRWFAKRKAMKENSKVQRLD 461
+LYIR+A+ ELD K +MK++I L+V+VG IAIAIC F++WRW +++ K+ +R
Sbjct: 419 DLYIRLAYTELDNKKINMKVIISLTVVVGAIAIAICVFYSWRWIERKRTSKKVLLPKRKH 478
Query: 462 LGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQE 521
N + +N +LQ+L +F+ + L AT+NF ANKLGQGGFGPVYKGK DGQE
Sbjct: 479 PILLDENVIQDNLNHVKLQELPLFSLQMLIVATDNFNTANKLGQGGFGPVYKGKFPDGQE 538
Query: 522 IAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLL------------------------ 557
IA+KRLS+ASGQGQEEFM EV+VIS LQH NLVRLL
Sbjct: 539 IALKRLSRASGQGQEEFMTEVVVISKLQHMNLVRLLGCCVEGEEKMLVYEYMPNRSLDAF 598
Query: 558 --------------------GCC-----VEREENMLIYE-------YMPNKSLDSFLFDF 585
G C + R+ + I + ++ L+ + DF
Sbjct: 599 LFDPSRKQLLDWKKRFNIVEGICRGLLYLHRDSRLRIIHRDLKASNILLDQELNPKISDF 658
Query: 586 GLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSF 645
G+ARIFG N+DQA T R+VGT+GYMSPEYAMEGRFSEKSDVFSFGVLLLEI+SGRKNTSF
Sbjct: 659 GMARIFGRNEDQADTGRVVGTFGYMSPEYAMEGRFSEKSDVFSFGVLLLEIISGRKNTSF 718
Query: 646 YHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNM 705
Y E L+LLGYAWKLWN+ N+ LVDP IS F EI RCV+VGLLCVQEF KDRP +
Sbjct: 719 YGNEEALSLLGYAWKLWNEGNIAALVDPGISYPSFHEEIFRCVHVGLLCVQEFAKDRPAI 778
Query: 706 PTVVSMLNSEIKDLPAAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
TV+SMLNSEI DLP KQPAF+ RR D+A S +Q+ SIN+VTVTL+ GR
Sbjct: 779 FTVISMLNSEIVDLPTPKQPAFSERRSELDTA-SLQHDQRPESINNVTVTLLSGR 832
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359496521|ref|XP_002262970.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/848 (50%), Positives = 579/848 (68%), Gaps = 104/848 (12%)
Query: 4 VAIVVLLSSCFYSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIG 63
+A+++LLS FG TA DT+TS++FI DPE+++S+GS FKLGFFS + TNRY+G
Sbjct: 10 IALLLLLSVIC---FGFCTAIDTMTSTRFIEDPETLVSNGSAFKLGFFSL-ADSTNRYVG 65
Query: 64 IWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNS 123
IWY+ + TV+WVANR+KPL DSSGI TISEDGNL+V+NG+K++ WSSNVS+ + NS
Sbjct: 66 IWYST--PSLSTVIWVANRDKPLNDSSGIVTISEDGNLLVMNGQKEIVWSSNVSNASANS 123
Query: 124 NTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSN 183
+ AQLLDSGNLVL DN ++ W+S Q P+ + MK+STD TG+KV LTSW+S S+
Sbjct: 124 S--AQLLDSGNLVLQDNSGSIT-WESIQHPSHSLLPNMKISTDTNTGEKVVLTSWKSPSD 180
Query: 184 PSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDHQ 243
PSIGSFS G++ IP++FIW NG+ PYWRSGPW+ + FIGIPDM+SVY GF + +D +
Sbjct: 181 PSIGSFSLGMNPLNIPQIFIW-NGSHPYWRSGPWSSQIFIGIPDMDSVYRSGFQVVDD-K 238
Query: 244 KGTRYLTFAFADNDVF--FALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFG 301
+GT Y TF A++ +F + LT QG+L + GK + + ++CDVYG CGAFG
Sbjct: 239 EGTVYATFTEANSSIFLYYVLTSQGSLVQTDREYGKEEWGVTWRSNKSECDVYGTCGAFG 298
Query: 302 SCNSQKIPICSCLLGFEPKNAEDWNRGNWSGGEV---------------EGKQDGFFKLE 346
CNS PICSCL G+EPK E+W+RGNW+ G V +GK DGFF+L
Sbjct: 299 ICNSGTSPICSCLRGYEPKYTEEWSRGNWTSGCVRKTTLQCERTNSSGQQGKIDGFFRLT 358
Query: 347 TMKVPYFAERSSANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNLY 406
T+KVP +A+ S A+ED+C+++C NCSC AY+Y G+GCM+W+ +LID++K G +LY
Sbjct: 359 TVKVPDYADWSLAHEDECREECLKNCSCIAYSYYSGIGCMLWSGSLIDLQKFTKRGADLY 418
Query: 407 IRVAHEEL--DRKDMKLVIILSVIVGIIAIAICTFFAWRWFAKRKAMKENSK-VQRLDLG 463
IR+AH EL +++DMK++I +++++G IAIAICT+F WRW R+A+KE SK + D G
Sbjct: 419 IRLAHSELGKNKRDMKVIISVTIVIGTIAIAICTYFLWRWIG-RQAVKEKSKEILPSDRG 477
Query: 464 EAYANFST----EKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDG 519
AY N+ + VN +L++L + +FE+LA ATNNF ANKLGQGGFGPVY+G L G
Sbjct: 478 HAYQNYDMNMLGDNVNRVKLEELPLLDFEKLAAATNNFHEANKLGQGGFGPVYRGNLPGG 537
Query: 520 QEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLL-----------GCCVEREE--- 565
Q+IAVKRLS+AS QGQEEFMNE++VIS +QHRNLVRLL G C+E +E
Sbjct: 538 QKIAVKRLSRASAQGQEEFMNEMIVISKIQHRNLVRLLGFCIEGDVRLLGFCIEGDEKLL 597
Query: 566 ----------NMLIYEYMPNKSLD------------------------------------ 579
+ +++ + +SLD
Sbjct: 598 IYEYMPNKSLDAFLFDPLKRESLDWRRRFSIIEGIGRGLLYLHRDSRLKIIHRDLKASNI 657
Query: 580 -------SFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVL 632
+ + DFG+ARIFG NQDQA T R+VGTYGYMSPEYAM G+FSEKSDVFSFGVL
Sbjct: 658 LLDEDLNAKISDFGMARIFGSNQDQANTMRVVGTYGYMSPEYAMGGQFSEKSDVFSFGVL 717
Query: 633 LLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGL 692
LLEIVSGR+NTSF +++ ++LLGYAW LW +N+ +L+D I+E+ F+ EI RC++VGL
Sbjct: 718 LLEIVSGRRNTSFQYDDQHMSLLGYAWTLWCQHNIQELIDETIAEACFQEEISRCIHVGL 777
Query: 693 LCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAFTVRRGAYDSASSSNQNQQICSINDV 752
LCVQE KDRP++ TV+SML+SEI LP+ KQP F ++ A D+ SS + + CS N V
Sbjct: 778 LCVQESAKDRPSISTVLSMLSSEIAHLPSPKQPPFLEKQTAIDTESSQPRENK-CSSNQV 836
Query: 753 TVTLMEGR 760
TVT+++GR
Sbjct: 837 TVTIIQGR 844
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224078778|ref|XP_002305625.1| predicted protein [Populus trichocarpa] gi|222848589|gb|EEE86136.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/835 (51%), Positives = 553/835 (66%), Gaps = 87/835 (10%)
Query: 2 ISVAIVVLLSSCFYSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRY 61
ISVA++ LL+S F + TA DTITS+QF++DPE+I+S+G+ + LGFFSP N T+RY
Sbjct: 8 ISVALL-LLTSSFCVEI--ITAIDTITSTQFLKDPEAIVSNGNIYTLGFFSP-VNSTDRY 63
Query: 62 IGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLAN 121
+GIW+N+ T +WVANRN PL DSSGI IS+DG LVVLNG++++ WS+NVS+ +
Sbjct: 64 VGIWFNEVPVV--TAIWVANRNNPLNDSSGILAISKDGALVVLNGQQEILWSTNVSNFVS 121
Query: 122 NSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSL 181
NS+ AQL D+GNLVL DN ++ +W+SFQ P+DTF+S MK+S + RTG K +TSW+S
Sbjct: 122 NSS--AQLSDTGNLVLRDNNNEEIMWESFQYPSDTFFSNMKLSANKRTGGKTLITSWKSA 179
Query: 182 SNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGED 241
++PSIGSFSAGL+ IPE+FIW + PY+RSGPWN FIG+P MNS +DG NL +D
Sbjct: 180 TDPSIGSFSAGLNHLDIPEIFIWKD-NYPYFRSGPWNRLVFIGVPYMNSAAVDGLNLVDD 238
Query: 242 HQKGTRYLTFAFADNDVF--FALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGA 299
+ GT LTF++A+ + F LT QG LE+ W G + + P DC+ YG+CG
Sbjct: 239 GE-GTIDLTFSYANQSIMSSFVLTSQGQLEQTRWEHGMEDRIVLWSVPMFDCEFYGRCGL 297
Query: 300 FGSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGG----------------EVEGKQDGFF 343
FGSCN+Q PICSCL GFEP N E+W GNW+GG E GK D F
Sbjct: 298 FGSCNAQASPICSCLRGFEPNNPEEWYVGNWTGGCIRRKSLQCERVKSESEAAGKNDVFL 357
Query: 344 KLETMKVPYFAERSSANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGT 403
KL MKVP A+ S E +CKD+C NCSC AYAY+ G+GCM W +LID+++ P+GG
Sbjct: 358 KLGNMKVPDLAQWSRLTEIECKDKCLTNCSCIAYAYDSGIGCMSWIGDLIDVQEFPTGGA 417
Query: 404 NLYIRVAHEELD-RKDMKLVIILSVIVGIIAIA-ICTFFAWRWFAKRKAMKENSKVQRLD 461
+LYIR+A+ ELD K+++I+S ++G I A IC WR+ +K + K +S
Sbjct: 418 DLYIRMAYSELDGNHRKKVIVIVSAVIGTITSAMICALLTWRFMSKHRGEKLHSDTNEKH 477
Query: 462 LGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQE 521
+ + + ++ +LQ+L +F+ E L AT+ F L+NKLGQGGFGPVYKGKL DG+E
Sbjct: 478 PSFLDRDMAGDSMDHVKLQELPLFSLESLTAATDGFDLSNKLGQGGFGPVYKGKLSDGKE 537
Query: 522 IAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML------------- 568
IAVKRLS+ASGQG +EFMNEV VIS LQHRNLVRLLGCCVE EE +L
Sbjct: 538 IAVKRLSRASGQGLKEFMNEVEVISKLQHRNLVRLLGCCVEGEEKLLVYEYMPNKSLDAF 597
Query: 569 IYEYMPNKSLD-------------SFLF------------------------------DF 585
+Y+ + + LD L+ DF
Sbjct: 598 LYDPLRKQLLDWKKRFNIIEGICRGLLYLHRDSRLRIIHRDLKASNILLDPELKPKISDF 657
Query: 586 GLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSF 645
G ARIFGG++DQA T R+VGTYGY+SPEYAMEGRFSEKSDV+SFGVLLLEIVSGR+NTSF
Sbjct: 658 GAARIFGGDEDQANTIRVVGTYGYISPEYAMEGRFSEKSDVYSFGVLLLEIVSGRRNTSF 717
Query: 646 YHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNM 705
Y E L+LLG+AWKLWN+ N+ LVDP IS+ ++EI RC++VGLLCVQEF +DRP
Sbjct: 718 YGNEQALSLLGFAWKLWNEGNISALVDPAISDPSSQVEIFRCIHVGLLCVQEFPEDRPTA 777
Query: 706 PTVVSMLNSEIKDLPAAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
TVVSMLNSEI L KQP F R+ ++ +QN++ CSIN VTVT+++ R
Sbjct: 778 STVVSMLNSEISYLATPKQPPFAERKYHFNE-ERPHQNEEKCSINYVTVTVVDAR 831
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224114137|ref|XP_002316677.1| predicted protein [Populus trichocarpa] gi|222859742|gb|EEE97289.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/839 (51%), Positives = 552/839 (65%), Gaps = 100/839 (11%)
Query: 3 SVAIVVLLSSCFYSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYI 62
S +L+ CF +FG + DTITSSQ+I+DPE I+S+G+KFKLGFFSP N TNRY
Sbjct: 8 STIAFLLILYCFCWEFGASV--DTITSSQYIKDPEDIVSAGNKFKLGFFSP-VNSTNRYA 64
Query: 63 GIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANN 122
IWY+ + T VWVANRN PL DSSGI TISEDGNLVVLNG+K++ WSSNVS+ N+
Sbjct: 65 AIWYSN--ISITTPVWVANRNMPLNDSSGIMTISEDGNLVVLNGQKEILWSSNVSTGMND 122
Query: 123 SNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLS 182
S RAQL+D GNLVL + + S+W SFQEP+DT+ +M+++ + RTGKK L SW S+S
Sbjct: 123 S--RAQLMDDGNLVLGGSENGNSLWQSFQEPSDTYMPKMRLTANSRTGKKTLLKSWTSVS 180
Query: 183 NPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDH 242
+PSIGS S G+D IP+ +IW NG+RP WR+GPWNG+ FIGIP+M SVYLDGFN+ D
Sbjct: 181 DPSIGSISGGIDPSRIPQFYIW-NGSRPIWRTGPWNGQVFIGIPEMVSVYLDGFNIA-DE 238
Query: 243 QKGTRYLTFAFADNDVF--FALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAF 300
GT L+ FA+ + + L+ +G + W D + + + +P ++CDVYGKCG+F
Sbjct: 239 GNGTFTLSVGFANESLISNYILSSEGKFGKVLWDDTEGSWRYEWKFPKDECDVYGKCGSF 298
Query: 301 GSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGGEVE---------------GKQDGFFKL 345
GSCN + PICSCL GFEPKNA++WN GNW+ G V GK+DGF KL
Sbjct: 299 GSCNPKDSPICSCLKGFEPKNADEWNNGNWTNGCVRRRELQCERTQNGGQVGKEDGFLKL 358
Query: 346 ETMKVPYFAE-RSSANEDKCKDQCSN-NCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGT 403
E MKVP F+E SS +E CK++C N NCSC AY+Y G GCM+W NL D++K P
Sbjct: 359 ERMKVPDFSEWLSSTSEHTCKNECLNINCSCIAYSYYPGFGCMLWRGNLTDLKKFPIKAA 418
Query: 404 NLYIRVAHEELDRK--DMKLVIILSVIVGIIAIAICTFFAWRWFAKRKAMKE----NSKV 457
+LYIR+A ELD K ++K++I L+V+VG IAIAIC F++WR +++ K+ KV
Sbjct: 419 DLYIRLADSELDNKKINLKVIISLTVVVGAIAIAICVFYSWRRIDRKRKSKKVFLSKRKV 478
Query: 458 QRLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQ 517
L + N + +N +LQ+L +F+ + L AT+NF ANKLGQGGFGPVYKG L
Sbjct: 479 GYPILSDE--NMIQDNLNHVKLQELPLFSLQTLIAATDNFNTANKLGQGGFGPVYKGNLS 536
Query: 518 DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLL-------------------- 557
DGQEIAVKRLS++SGQG EEFMNEV+VIS LQHRNLVR+L
Sbjct: 537 DGQEIAVKRLSRSSGQGLEEFMNEVVVISKLQHRNLVRILGCCVEGEEKMLIYEYMPNKS 596
Query: 558 ------------------------GCC-----VEREENMLIYE-------YMPNKSLDSF 581
G C + R+ + I + ++ L+
Sbjct: 597 LDAFLFDSLRKQLLDWKNRFKIVEGICRGLLYLHRDSRLRIIHRDLKASNILLDQELNPK 656
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK 641
+ DFG+ARIFG ++DQA T+R+VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLE +SGRK
Sbjct: 657 ISDFGMARIFGNHEDQANTRRVVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLETISGRK 716
Query: 642 NTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKD 701
NT+++ L AWKLWN+ N+ LVDP IS F EI RCV+VGLLCVQEF KD
Sbjct: 717 NTTYF-------LTSQAWKLWNEGNIAALVDPGISYPSFHEEIFRCVHVGLLCVQEFAKD 769
Query: 702 RPNMPTVVSMLNSEIKDLPAAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
RP + TV+SMLNSEI DLP KQPAF+ RR D+ S +Q+ SIN+VTVTL+ GR
Sbjct: 770 RPAIFTVISMLNSEIADLPTPKQPAFSERRSELDT-KSLQHDQRPESINNVTVTLLSGR 827
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147840284|emb|CAN63987.1| hypothetical protein VITISV_016155 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/832 (50%), Positives = 551/832 (66%), Gaps = 114/832 (13%)
Query: 18 FGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVV 77
F TATDTITS+QFI+DPE+++S+GS FK+GFFSP GN T RY GIWYN ++ TV+
Sbjct: 21 FQFCTATDTITSTQFIKDPETMVSNGSLFKMGFFSP-GNSTKRYFGIWYNS--TSLFTVI 77
Query: 78 WVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVL 137
W+ANR PL DSSGI +SEDGNL+VLN +K++ WSSNVS+ A NS RAQLLDSGNLVL
Sbjct: 78 WIANRENPLNDSSGIVMVSEDGNLLVLNDQKEIFWSSNVSNAALNS--RAQLLDSGNLVL 135
Query: 138 HDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSFT 197
D S W SFQ P+ F +M++S +++TG+K LTSW+S S+PS+GSFS G+D
Sbjct: 136 QDKNSGRITWQSFQHPSHAFLQKMELSENMKTGEKQGLTSWKSPSDPSVGSFSTGIDPSD 195
Query: 198 IPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDHQKGTRYLTF--AFAD 255
IPE+F+W NG+RP+WRSGPWNG+ IG+PDMN YL+GF++ D ++G +TF A+A
Sbjct: 196 IPEIFVW-NGSRPFWRSGPWNGQTLIGVPDMN--YLNGFHIVND-KEGNVSVTFEHAYAS 251
Query: 256 NDVFFALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFGSCNSQKIPICSCLL 315
++ L+PQG + E DG + +I + +CDVYGKCGAFG CN++ PICSCL
Sbjct: 252 ILWYYVLSPQGTIVEIYSDDGMKNWEITWQSRKTECDVYGKCGAFGICNAKNSPICSCLR 311
Query: 316 GFEPKNAEDWNRGNWSGGEV---------------EGKQDGFFKLETMKVPYFAERSSAN 360
G+EP+N E+W+RGNW+GG V EG+ DGF +L T+KVP FAE S A
Sbjct: 312 GYEPRNIEEWSRGNWTGGCVRKTPFQCEKINGSMEEGEADGFIRLTTVKVPDFAEWSLAL 371
Query: 361 EDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNLYIRVAHEELDRKDMK 420
ED CK+ C NCSC AYAY G+GCM W+ NL D++K S G +LYIRV + EL
Sbjct: 372 EDDCKEFCLKNCSCIAYAYYTGIGCMSWSRNLTDVQKFSSNGADLYIRVPYSEL------ 425
Query: 421 LVIILSVIVGIIAIAICTFFAWRWFAKRKAMKENS-KVQRLDLGEAYANFST-----EKV 474
G I +A+ +F+ RW KR+A + ++ D G+ + N S +++
Sbjct: 426 ---------GTIFVAVFIYFSRRWITKRRAKNKKRKEMLSSDRGDVHLNVSDANILGDRM 476
Query: 475 NPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYK----------GKLQDGQEIAV 524
N +L++L + +F +L ATNNF ANKLGQGGFG VY+ G+L +GQEIAV
Sbjct: 477 NQVKLEELPLVDFGKLVTATNNFDEANKLGQGGFGSVYRVMLAHLELHGGRLPEGQEIAV 536
Query: 525 KRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM-------------LIYE 571
KRLS+AS QG EEFMNEV+VIS LQHRNLVRLLGCC+E +E M L+++
Sbjct: 537 KRLSRASAQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEKMLIYEYMPKKSLDALLFD 596
Query: 572 YMPNKSLD-------------SFLF------------------------------DFGLA 588
+ ++LD L+ DFG+A
Sbjct: 597 PLRQETLDWKKRFSIIEGIGRGLLYLHRDSRLRIIHRDLKASNILLDXNLNPKISDFGMA 656
Query: 589 RIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHE 648
RIFGGNQDQA T R+VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR+N SFYH+
Sbjct: 657 RIFGGNQDQANTIRVVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRRNNSFYHD 716
Query: 649 EFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTV 708
E L+LLGYAWKLWN++N+ L+D ISE+ F EI+RC++VGLLCVQE KDRP++ TV
Sbjct: 717 EQSLSLLGYAWKLWNEHNIETLIDGSISEACFPDEILRCIHVGLLCVQELAKDRPSISTV 776
Query: 709 VSMLNSEIKDLPAAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
VSM+ SEI LP K+PAFT R+ + D+ S Q+Q CS++ ++T+++ R
Sbjct: 777 VSMICSEIAXLPTPKKPAFTERQISKDT-ESXGQSQNNCSVDRASITIIQAR 827
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224112032|ref|XP_002332843.1| predicted protein [Populus trichocarpa] gi|222833304|gb|EEE71781.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/839 (49%), Positives = 540/839 (64%), Gaps = 97/839 (11%)
Query: 4 VAIVVLLSSCFYSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIG 63
+A + LL CF G A DTITSSQ+I+DPE+++S+G+KFKLGFFSP GN TNRY+G
Sbjct: 1 MAALRLLLCCFCWQLGAAV--DTITSSQYIKDPEAVVSAGNKFKLGFFSP-GNSTNRYVG 57
Query: 64 IWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNS 123
IWY+ + T VW+ANRNKPL DSSGI TISEDGN+VVL+G+K++ WSSNVS+ +NS
Sbjct: 58 IWYSN--ISVTTPVWIANRNKPLNDSSGIMTISEDGNIVVLDGRKEILWSSNVSNGVSNS 115
Query: 124 NTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSN 183
+ AQL D GN++L S+W SFQEP+DTF +M+++ + RTGKK Q+TSW+S S+
Sbjct: 116 S--AQLTDDGNVILRGGEIGNSLWQSFQEPSDTFMLKMRLTANRRTGKKTQITSWKSPSD 173
Query: 184 PSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDHQ 243
PS+GSFS+G++ +IPEVF+W N +RP+WRSGPWNG+ FIGIP+MNSVYL+G+NL +D
Sbjct: 174 PSVGSFSSGIEPSSIPEVFVW-NDSRPFWRSGPWNGQAFIGIPEMNSVYLNGYNLVQDGD 232
Query: 244 KGTRYLTFAFADNDVF--FALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFG 301
GT L+ A+ FAL+ +G E W + YP +DCD+YGKCG FG
Sbjct: 233 -GTFSLSVGLANESYITNFALSYEGRFGEMYWDSANERWEHKKQYPGDDCDIYGKCGPFG 291
Query: 302 SCNSQKIPICSCLLGFEPKNAEDWNRGNWSGGEVE---------------GKQDGFFKLE 346
CN+Q IC CL GFEPKN+++WNR NW+ G V K+D F KL+
Sbjct: 292 FCNTQNSLICRCLKGFEPKNSDEWNRRNWTNGCVRRRELKCERTQSDGQVPKEDEFLKLD 351
Query: 347 TMKVPYFAE-RSSANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNL 405
+KVP F+E SSA+E CKD+C NNCSC AY+Y G+GCM+W L DIRK SGG NL
Sbjct: 352 KVKVPDFSEWSSSASEQNCKDECLNNCSCIAYSYHTGIGCMLWRGKLTDIRKFSSGGANL 411
Query: 406 YIRVAHEELDR-KDMKLVIILSVIVGIIAIAICTFFAWRWFAK-RKAMKENSKVQRLDLG 463
Y+R+A E + +DMK VI ++V+ G I +A+ FF WR AK R+ +E+ ++
Sbjct: 412 YVRLADLEFGKNRDMKAVICITVVTGAIIVAVGAFFWWRRMAKYRERKRESERILSSRRK 471
Query: 464 EAY-----ANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQD 518
+ Y N E +N + Q+L +F + L AT+ F ANKLG+GGFGPVY+G L D
Sbjct: 472 KGYPIFFNGNLIQESMNQVKFQELPLFKLQMLIAATDYFDAANKLGEGGFGPVYRGNLPD 531
Query: 519 GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLL--------------------- 557
GQEIAVKRLS+ASGQGQEEFMNEV+VIS LQHRNLVRLL
Sbjct: 532 GQEIAVKRLSRASGQGQEEFMNEVVVISELQHRNLVRLLGCCVEGDEKMLVYEYMPNKSL 591
Query: 558 -----------------------GCC-----VEREENMLIYE-------YMPNKSLDSFL 582
G C + R+ + I + ++ L+ +
Sbjct: 592 DASLFDPVRKEVLDWKKRFNIVDGICRGLLYLHRDSRLRIIHRDLKPSNILLDQELNPKI 651
Query: 583 FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKN 642
DFG+ARIFGGN+D T+R+VGTYGYMSPEYAM GRFSEKSDVFSFGVLLLEIVSGR++
Sbjct: 652 SDFGMARIFGGNEDHVKTRRVVGTYGYMSPEYAMHGRFSEKSDVFSFGVLLLEIVSGRRS 711
Query: 643 TSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF-KMEIIRCVNVGLLCVQEFVKD 701
T E L LL +AWKLWN+ N LVDP ++ + K+EI RC++VGLLCVQEF KD
Sbjct: 712 TKIDGNEQGLNLLEFAWKLWNEGNAPALVDPALTLDQYSKVEIFRCIHVGLLCVQEFAKD 771
Query: 702 RPNMPTVVSMLNSEIKDLPAAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
RP + T++SMLNSEI DLP PA+T R + + SIN V+ TL GR
Sbjct: 772 RPAISTIISMLNSEIVDLPLPNNPAYTERLIGLHTERRGD------SINFVSTTLFTGR 824
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224114141|ref|XP_002316678.1| predicted protein [Populus trichocarpa] gi|222859743|gb|EEE97290.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/839 (49%), Positives = 540/839 (64%), Gaps = 97/839 (11%)
Query: 4 VAIVVLLSSCFYSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIG 63
+A + LL CF G A DTITSSQ+I+DPE+++S+G+KFKLGFFSP GN TNRY+G
Sbjct: 1 MAALRLLLCCFCWQLGAAV--DTITSSQYIKDPEAVVSAGNKFKLGFFSP-GNSTNRYVG 57
Query: 64 IWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNS 123
IWY+ + T VW+ANRNKPL DSSGI TISEDGN+VVL+G+K++ WSSNVS+ +NS
Sbjct: 58 IWYSN--ISVTTPVWIANRNKPLNDSSGIMTISEDGNIVVLDGRKEILWSSNVSNGVSNS 115
Query: 124 NTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSN 183
+ AQL D GN++L S+W SFQEP+DTF +M+++ + RTGKK Q+TSW+S S+
Sbjct: 116 S--AQLTDDGNVILRGGEIGNSLWQSFQEPSDTFMLKMRLTANRRTGKKTQITSWKSPSD 173
Query: 184 PSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDHQ 243
PS+GSFS+G++ +IPEVF+W N +RP+WRSGPWNG+ FIGIP+MNSVYL+G+NL +D
Sbjct: 174 PSVGSFSSGIEPSSIPEVFVW-NDSRPFWRSGPWNGQAFIGIPEMNSVYLNGYNLVQDGD 232
Query: 244 KGTRYLTFAFADNDVF--FALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFG 301
GT L+ A+ FAL+ +G E W + YP +DCD+YGKCG FG
Sbjct: 233 -GTFSLSVGLANESYITNFALSYEGRFGEMYWDSANERWEHKKQYPGDDCDIYGKCGPFG 291
Query: 302 SCNSQKIPICSCLLGFEPKNAEDWNRGNWSGGEVE---------------GKQDGFFKLE 346
CN+Q IC CL GFEPKN+++WNR NW+ G V K+D F KL+
Sbjct: 292 FCNTQNSLICRCLKGFEPKNSDEWNRRNWTNGCVRRRELKCERTQSDGQVPKEDEFLKLD 351
Query: 347 TMKVPYFAE-RSSANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNL 405
+KVP F+E SSA+E CKD+C NNCSC AY+Y G+GCM+W L DIRK SGG NL
Sbjct: 352 KVKVPDFSEWSSSASEQNCKDECLNNCSCIAYSYHTGIGCMLWRGKLTDIRKFSSGGANL 411
Query: 406 YIRVAHEELDR-KDMKLVIILSVIVGIIAIAICTFFAWRWFAK-RKAMKENSKVQRLDLG 463
Y+R+A E + +DMK VI ++V+ G I +A+ FF WR AK R+ +E+ ++
Sbjct: 412 YVRLADLEFGKNRDMKAVICITVVTGAIIVAVGAFFWWRRMAKYRERKRESERILSSRRK 471
Query: 464 EAY-----ANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQD 518
+ Y N E +N + Q+L +F + L AT+ F ANKLG+GGFGPVY+G L D
Sbjct: 472 KGYPIFFNGNLIQESMNQVKFQELPLFKLQMLIAATDYFDAANKLGEGGFGPVYRGNLPD 531
Query: 519 GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLL--------------------- 557
GQEIAVKRLS+ASGQGQEEFMNEV+VIS LQH+NLVRLL
Sbjct: 532 GQEIAVKRLSRASGQGQEEFMNEVVVISELQHKNLVRLLGCCVEGDEKMLVYEYMPNKSL 591
Query: 558 -----------------------GCC-----VEREENMLIYE-------YMPNKSLDSFL 582
G C + R+ + I + ++ L+ +
Sbjct: 592 DASLFDPVRKEVLDWKKRFNIVDGICRGLLYLHRDSRLRIIHRDLKPSNILLDQELNPKI 651
Query: 583 FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKN 642
DFG+ARIFGGN+D T+R+VGTYGYMSPEYAM GRFSEKSDVFSFGVLLLEIVSGR++
Sbjct: 652 SDFGMARIFGGNEDHVKTRRVVGTYGYMSPEYAMHGRFSEKSDVFSFGVLLLEIVSGRRS 711
Query: 643 TSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF-KMEIIRCVNVGLLCVQEFVKD 701
T E L LL +AWKLWN+ N LVDP ++ + K+EI RC++VGLLCVQEF KD
Sbjct: 712 TKIDGNEQGLNLLEFAWKLWNEGNAPALVDPALTLDQYSKVEIFRCIHVGLLCVQEFAKD 771
Query: 702 RPNMPTVVSMLNSEIKDLPAAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
RP + T++SMLNSEI DLP PA+T R + + SIN V+ TL GR
Sbjct: 772 RPAISTIISMLNSEIVDLPLPNNPAYTERLIGLHTERRGD------SINFVSTTLFTGR 824
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356546688|ref|XP_003541755.1| PREDICTED: uncharacterized protein LOC100800829 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/828 (50%), Positives = 537/828 (64%), Gaps = 104/828 (12%)
Query: 18 FGTATATDTITSSQFIRDPESIISSG-SKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTV 76
G +ATDT+TSSQ IRD E++++S S FKLGFFSP N T+RY+GIWY ++ V
Sbjct: 812 LGLTSATDTLTSSQSIRDSETVVTSNDSVFKLGFFSPQ-NSTHRYVGIWY----LSDSNV 866
Query: 77 VWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLV 136
+W+ANRNKPL+DSSG+ IS+DGNLV+++GK V WSSNVS+ A ++T AQL SGNLV
Sbjct: 867 IWIANRNKPLLDSSGVLKISKDGNLVLVDGKNHVIWSSNVSNTATITST-AQLSRSGNLV 925
Query: 137 LHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSF 196
L D+ + ++W+SF+ P D+ M++S + TG+K++ S +S S+PS G FSA L+
Sbjct: 926 LKDDSTGQTLWESFKHPCDSAVPTMRISANRITGEKIRFVSRKSASDPSTGYFSASLERL 985
Query: 197 TIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDHQKGTRYLTFAFADN 256
PEVF+WINGTRPYWR+GPWNGR FIG P M++ YL G+N+G + + T YLT++FAD
Sbjct: 986 DAPEVFLWINGTRPYWRTGPWNGRIFIGTPLMSTGYLYGWNVGYEGNE-TVYLTYSFADP 1044
Query: 257 DVFFALT--PQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFGSCNSQKIPICSCL 314
F LT PQG L+ + + K L + +DCDVYG CGAFGSCN Q PICSCL
Sbjct: 1045 SSFGILTLIPQGKLKLVRYYNRKHTLTLDL--GISDCDVYGTCGAFGSCNGQNSPICSCL 1102
Query: 315 LGFEPKNAEDWNRGNWSGGEV---------------EGKQDGFFKLETMKVPYFAERSSA 359
G+EP+N E+W+R NW+ G V + ++D F KLETMKVP FAER
Sbjct: 1103 SGYEPRNQEEWSRQNWTSGCVRKVPLKCERFKNGSEDEQEDQFLKLETMKVPDFAERLDV 1162
Query: 360 NEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNLYIRVAHEELDRKDM 419
E +C QC NCSC AYAY+ G+GC+ WT +LID++K + G +LYIR+A E +
Sbjct: 1163 EEGQCGTQCLQNCSCLAYAYDAGIGCLYWTRDLIDLQKFQTAGVDLYIRLARSEFQSSNA 1222
Query: 420 ----------KLVIILSV-IVGIIAIAICTFFAWRWFAKRKAMKENSKVQRLDLGEAYAN 468
+L+I ++V G I AIC + A R F K ++S+ Q +
Sbjct: 1223 QEHTNKTRGKRLIIGITVATAGTIIFAICAYLAIRRFNSWKGTAKDSENQ--------SQ 1274
Query: 469 FSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLS 528
TE PA+L +L +F+FE +ANAT+NF LAN LG+GGFGPVYKG L DGQEIAVKRL+
Sbjct: 1275 RVTEVQKPAKLDELPLFDFEVVANATDNFHLANTLGKGGFGPVYKGLLPDGQEIAVKRLA 1334
Query: 529 KASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDF--- 585
KASGQG EEFMNEV VIS LQHRNLV+LLGCCVE +E MLIYE+MPNKSLD+F+FD
Sbjct: 1335 KASGQGLEEFMNEVGVISKLQHRNLVKLLGCCVEGDEKMLIYEFMPNKSLDAFIFDPLRQ 1394
Query: 586 -------------GLAR----------------------------------------IFG 592
G+AR I+
Sbjct: 1395 KLLDWTKRFNIIEGVARGLLYLHRDSRLKIIHRDLKASNILLDAEMNPKISDFGLARIYK 1454
Query: 593 GNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFEL 652
G +D+ TKR+VGTYGYMSPEYAMEG FSEKSD++SFGVLLLEI+SG++NTSF +++ L
Sbjct: 1455 G-EDEVNTKRVVGTYGYMSPEYAMEGLFSEKSDIYSFGVLLLEIISGKRNTSFRNDDQSL 1513
Query: 653 TLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712
+L+GYAW LWN++N+ LVDP IS SG + I RC+++ LCVQE K RP M TV+SML
Sbjct: 1514 SLIGYAWNLWNEDNISFLVDPEISASGSENHIFRCIHIAFLCVQEVAKTRPTMTTVLSML 1573
Query: 713 NSEIKDLPAAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
NSEI LP +Q F V++ + S SS+Q Q S N VT+T M+GR
Sbjct: 1574 NSEISHLPPPRQVGF-VQKQSSSSLESSSQENQFNSNNHVTLTEMQGR 1620
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224076552|ref|XP_002304960.1| predicted protein [Populus trichocarpa] gi|222847924|gb|EEE85471.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/822 (49%), Positives = 535/822 (65%), Gaps = 99/822 (12%)
Query: 21 ATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVA 80
A D ITSSQFI+DPE+I+S+ + FKLGFFSP N TNRY+GIWYN + T VWVA
Sbjct: 25 GVAVDIITSSQFIKDPEAIVSARNIFKLGFFSP-VNSTNRYVGIWYNDMPTV--TTVWVA 81
Query: 81 NRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDN 140
NRN+PL DSSG+ I +DGNLVVLNG++++ WSSNV LA ++RAQL D GNLVL
Sbjct: 82 NRNEPLNDSSGVLKIFQDGNLVVLNGQQEILWSSNV--LAGVKDSRAQLTDEGNLVLLGK 139
Query: 141 ISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPE 200
+ IW+SFQ+P +T M+VS + RTG+ LTSW S S+PS+G FS +D IPE
Sbjct: 140 NNGNVIWESFQQPCNTLLPNMRVSANARTGESTVLTSWISPSDPSVGRFSVSMDPLRIPE 199
Query: 201 VFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDHQKGTRYLTFAFADN-DVF 259
VF+W N P+WRSGPWNG+ FIGIP+MNSVYLDGFNL + G L+F + + +
Sbjct: 200 VFVW-NYKSPFWRSGPWNGQIFIGIPEMNSVYLDGFNLAKTAD-GAVSLSFTYVNQPNSN 257
Query: 260 FALTPQGNLEERAWVDGKAHLKIYF-FYPTNDCDVYGKCGAFGSCNSQKIPICSCLLGFE 318
F L G L ERAW K + +F + +CD+YGKCGAFGSCN+ PICSCL GF
Sbjct: 258 FVLRSDGKLIERAW---KVENQDWFNIWNRAECDIYGKCGAFGSCNAVNSPICSCLRGFV 314
Query: 319 PKNAEDWNRGNWSGGEVE---------------GKQDGFFKLETMKVPYFAERSSA-NED 362
PKN ++WN+GNW+ G + +DGF KLE +KVP F+E SS +E
Sbjct: 315 PKNPDEWNKGNWTSGCIRRTPLECTETQNIREVNPKDGFLKLEMIKVPDFSEWSSLYSEL 374
Query: 363 KCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNLYIRVAHEELD-RKDMKL 421
+C+++C +NCSC AY+Y G+GCM+WT +LIDI+K GG +LY+R+A+ ELD +K +K+
Sbjct: 375 ECRNECLSNCSCIAYSYYKGIGCMLWTRSLIDIQKFSVGGADLYLRLAYSELDTKKSVKI 434
Query: 422 VIILSVIVGIIAIAICTFFAWRWFAKRKAMKENSKVQRLDLGE------AYANFSTEKVN 475
VI ++VI G IA +IC F +WRW K K SK L E +Y N
Sbjct: 435 VISITVIFGTIAFSICAFLSWRWMVKHGERKRKSKEISLSKSEEPCRSSSYGNMIRNSGG 494
Query: 476 PARLQDL-LVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG 534
+LQ+L VF+ +EL NATN+F+++ KLG+GGFGPVY+GKL DGQEIAVKRLS+AS QG
Sbjct: 495 KVKLQELPAVFSLQELENATNSFEISKKLGEGGFGPVYRGKLPDGQEIAVKRLSRASQQG 554
Query: 535 QEEFMNEVMVISNLQHRNLVRLL------------------------------------- 557
EEFMNEV VIS LQHRNLV+LL
Sbjct: 555 LEEFMNEVSVISKLQHRNLVKLLAYCVEGEEKMLVYEYMPNKSLDAFLFDPAKQELLDWK 614
Query: 558 -------GCC-----VEREENMLIYE-------YMPNKSLDSFLFDFGLARIFGGNQDQA 598
G C + R+ + I + ++ L++ + DFG+AR FGG++DQA
Sbjct: 615 KRFNIIEGVCRGLLYLHRDSRLRIIHRDLKASNILLDQELNAKISDFGMARTFGGSEDQA 674
Query: 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA 658
T R+VGTYGYM+PEYAMEGRFSEKSDV+SFGVLLLEI+SGR+N+SFY E +L+ LG+A
Sbjct: 675 DTTRVVGTYGYMAPEYAMEGRFSEKSDVYSFGVLLLEIISGRRNSSFYDNEKDLSFLGFA 734
Query: 659 WKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
WKLW + + L D ++S+ F+ EI R ++VGLLCVQEF +DRP +PT++SML+SEI D
Sbjct: 735 WKLWTEGKLSALADRVLSDPCFQDEIYRSIHVGLLCVQEFARDRPAVPTIISMLHSEIVD 794
Query: 719 LPAAKQPAFTVRRGAYDSASSSNQNQQICSINDVTVTLMEGR 760
LPA K+PA +D S ++Q ICS ND+T+T++ GR
Sbjct: 795 LPAPKKPAL-----GFD-MDSLQRSQTICS-NDITITVIGGR 829
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 760 | ||||||
| TAIR|locus:2200908 | 842 | AT1G61610 [Arabidopsis thalian | 0.327 | 0.295 | 0.455 | 6.3e-148 | |
| TAIR|locus:2197734 | 814 | AT1G61370 [Arabidopsis thalian | 0.676 | 0.631 | 0.397 | 2.1e-143 | |
| TAIR|locus:2200888 | 804 | AT1G61500 [Arabidopsis thalian | 0.669 | 0.633 | 0.419 | 2.6e-143 | |
| TAIR|locus:2197649 | 821 | AT1G61360 [Arabidopsis thalian | 0.734 | 0.679 | 0.393 | 8.9e-143 | |
| TAIR|locus:2197744 | 807 | AT1G61420 [Arabidopsis thalian | 0.673 | 0.634 | 0.405 | 1.5e-140 | |
| TAIR|locus:2131684 | 783 | AT4G27290 [Arabidopsis thalian | 0.532 | 0.517 | 0.341 | 5e-140 | |
| TAIR|locus:2197704 | 831 | AT1G61390 [Arabidopsis thalian | 0.732 | 0.670 | 0.367 | 8.1e-140 | |
| TAIR|locus:2197664 | 804 | AT1G61490 [Arabidopsis thalian | 0.664 | 0.628 | 0.406 | 2.1e-139 | |
| TAIR|locus:2197709 | 809 | AT1G61480 [Arabidopsis thalian | 0.676 | 0.635 | 0.403 | 6.5e-138 | |
| TAIR|locus:2200923 | 802 | AT1G61550 [Arabidopsis thalian | 0.722 | 0.684 | 0.375 | 2.8e-135 |
| TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 555 (200.4 bits), Expect = 6.3e-148, Sum P(3) = 6.3e-148
Identities = 118/259 (45%), Positives = 159/259 (61%)
Query: 335 VEGKQDGFFKLETMKVPYFAERS-SANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLI 393
V G++DGF L+ +KVP F N + CKD C+ +CSCKAYA +G+GCMIWT +LI
Sbjct: 355 VAGQEDGFTVLKGIKVPDFGSVVLHNNSETCKDVCARDCSCKAYALVVGIGCMIWTRDLI 414
Query: 394 DIRKLPSGGTNLYIRVAHEELD--RKDMKXXXXXXXXXXXXXXXXCTFFAWRWFAKRKAM 451
D+ GG ++ IR+A +L +++ C + W++ KA
Sbjct: 415 DMEHFERGGNSINIRLAGSKLGGGKENSTLWIIVFSVIGAFLLGLCIWILWKFKKSLKAF 474
Query: 452 ---KENSKVQRLDLGEAYANFSTEKV---NPARLQDLLVFNFEELANATNNFQLANKLGQ 505
K++ V + Y++ S KV + DL +F+F+ +A+AT +F NKLGQ
Sbjct: 475 LWKKKDITVSDIIENRDYSS-SPIKVLVGDQVDTPDLPIFSFDSVASATGDFAEENKLGQ 533
Query: 506 GGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE 565
GGFG VYKG +G+EIAVKRLS S QG EEF NE+++I+ LQHRNLVRLLGCC+E E
Sbjct: 534 GGFGTVYKGNFSEGREIAVKRLSGKSKQGLEEFKNEILLIAKLQHRNLVRLLGCCIEDNE 593
Query: 566 NMLIYEYMPNKSLDSFLFD 584
ML+YEYMPNKSLD FLFD
Sbjct: 594 KMLLYEYMPNKSLDRFLFD 612
|
|
| TAIR|locus:2197734 AT1G61370 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1015 (362.4 bits), Expect = 2.1e-143, Sum P(2) = 2.1e-143
Identities = 218/549 (39%), Positives = 315/549 (57%)
Query: 56 NFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWXXX 115
N N+Y+GIW+ + VVWVANR+KP+ +++ TI+ +G+L+++ ++ V W
Sbjct: 55 NSRNQYVGIWFKN--ITPRVVVWVANRDKPVTNNAANLTINSNGSLILVEREQNVVWSIG 112
Query: 116 XXXXXXXXXTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQL 175
RA+LL++GNLVL D +S+ ++W+SF+ DT E V D+ KK L
Sbjct: 113 ETFSSNEL--RAELLENGNLVLIDGVSERNLWESFEHLGDTMLLESSVMYDVPNNKKRVL 170
Query: 176 TSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDG 235
+SW++ ++PS G F A L + P+ FI + G+RPYWR GPW F GIP+M+ ++
Sbjct: 171 SSWKNPTDPSPGEFVAELTTQVPPQGFI-MRGSRPYWRGGPWARVRFTGIPEMDGSHVSK 229
Query: 236 FNLGEDHQKGTRYLTFAFA---DNDVFFALTPQGNLEERAWVDGKAHLKIYFFYPTNDCD 292
F++ +D GT LT++ N + LT G+L+ W +G + P + CD
Sbjct: 230 FDISQDVAAGTGSLTYSLERRNSNLSYTTLTSAGSLKI-IWNNGSGWVTD-LEAPVSSCD 287
Query: 293 VYGKCGAFGSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGG---------EVEGKQ---- 339
VY CG FG C P C CL GF PK+ E+WN+ NW+GG +V
Sbjct: 288 VYNTCGPFGLCIRSNPPKCECLKGFVPKSDEEWNKRNWTGGCMRRTNLSCDVNSSATAQA 347
Query: 340 ---DGFFKLETMKVPYFAERSSA-NEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDI 395
D F + +K P F E S NE+ C+ +C NCSC A++Y +GC++W L+D+
Sbjct: 348 NNGDIFDIVANVKPPDFYEYLSLINEEDCQQRCLGNCSCTAFSYIEQIGCLVWNRELVDV 407
Query: 396 RKLPSGGTNLYIRVAHEELDRKDMKXXXXXXXXXXXXXXXXCTFFAWRWFAKRKAMKENS 455
+ +GG L IR+A EL + FA W+ + KA + +S
Sbjct: 408 MQFVAGGETLSIRLASSELAGSNR--VKIIVASIVSISVFMILVFASYWYWRYKAKQNDS 465
Query: 456 KVQRLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGK 515
L+ + + E++ P QD+ F+ + + TNNF + NKLGQGGFGPVYKG
Sbjct: 466 NPIPLETSQ---DAWREQLKP---QDVNFFDMQTILTITNNFSMENKLGQGGFGPVYKGN 519
Query: 516 LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575
LQDG+EIA+KRLS SGQG EEFMNE+++IS LQHRNLVRLLGCC+E EE +LIYE+M N
Sbjct: 520 LQDGKEIAIKRLSSTSGQGLEEFMNEIILISKLQHRNLVRLLGCCIEGEEKLLIYEFMAN 579
Query: 576 KSLDSFLFD 584
KSL++F+FD
Sbjct: 580 KSLNTFIFD 588
|
|
| TAIR|locus:2200888 AT1G61500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1044 (372.6 bits), Expect = 2.6e-143, Sum P(2) = 2.6e-143
Identities = 228/544 (41%), Positives = 313/544 (57%)
Query: 56 NFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWXXX 115
N ++Y+GIW+ + + VVWVANR KP+ DS+ IS G+L++LNGK W
Sbjct: 55 NTQDQYVGIWFKD--TIPRVVVWVANREKPVTDSTAYLAISSSGSLLLLNGKHGTVWSSG 112
Query: 116 XXXXXXXXXTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQL 175
RA+L DSGNL + DN+S+ ++W SF DT ++ +L T +K L
Sbjct: 113 VTFSSSG--CRAELSDSGNLKVIDNVSERALWQSFDHLGDTLLHTSSLTYNLATAEKRVL 170
Query: 176 TSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDG 235
TSW+S ++PS G F G + +P + G+ PYWRSGPW F GIP M+ Y
Sbjct: 171 TSWKSYTDPSPGDF-LGQITPQVPSQGFVMRGSTPYWRSGPWAKTRFTGIPFMDESYTGP 229
Query: 236 FNLGEDHQKGTRYLTFAFADNDVF-FALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVY 294
F L +D G+ YLT+ D + LT +G++ + + D ++Y+ P CD Y
Sbjct: 230 FTLHQD-VNGSGYLTYFQRDYKLSRITLTSEGSI--KMFRDNGMGWELYYEAPKKLCDFY 286
Query: 295 GKCGAFGSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGG-----EVE------GKQ-DGF 342
G CG FG C P+C C GF PK+ E+W RGNW+GG E++ G+ D F
Sbjct: 287 GACGPFGLCVMSPSPMCKCFRGFVPKSVEEWKRGNWTGGCVRHTELDCLGNSTGEDADDF 346
Query: 343 FKLETMKVPYFAE-RSSANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSG 401
++ +K P F E SS N ++C +C +NCSC A+AY G+GC++W +L+D + +
Sbjct: 347 HQIANIKPPDFYEFASSVNAEECHQRCVHNCSCLAFAYIKGIGCLVWNQDLMDAVQFSAT 406
Query: 402 GTNLYIRVAHEELD-RKDMKXXXXXXXXXXXXXXXXCTFFAWRWFAKRKAMKENSKVQRL 460
G L IR+A ELD K K T F W + + + SK
Sbjct: 407 GELLSIRLARSELDGNKRKKTIVASIVSLTLFMILGFTAFGV-WRCRVEHIAHISK---- 461
Query: 461 DLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQ 520
+A+ N + P + L F+ + NATNNF L+NKLGQGGFG VYKGKLQDG+
Sbjct: 462 ---DAWKN----DLKPQDVPGLDFFDMHTIQNATNNFSLSNKLGQGGFGSVYKGKLQDGK 514
Query: 521 EIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDS 580
EIAVKRLS +SGQG+EEFMNE+++IS LQHRNLVR+LGCC+E EE +LIYE+M NKSLD+
Sbjct: 515 EIAVKRLSSSSGQGKEEFMNEIVLISKLQHRNLVRVLGCCIEEEEKLLIYEFMVNKSLDT 574
Query: 581 FLFD 584
FLFD
Sbjct: 575 FLFD 578
|
|
| TAIR|locus:2197649 AT1G61360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1038 (370.5 bits), Expect = 8.9e-143, Sum P(2) = 8.9e-143
Identities = 238/605 (39%), Positives = 332/605 (54%)
Query: 4 VAIVVLLSSCFYSDFGTATATDTITSSQFIRDPESI---IXXXXXXXXXXXXPDGNFTNR 60
VA ++L+++ F S +G A T TSS P SI + N N+
Sbjct: 4 VACLLLITALF-SSYGYAAIT---TSS-----PLSIGVTLSSPGGSYELGFFSSNNSGNQ 54
Query: 61 YIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWXXXXXXXX 120
Y+GIW+ K + +VWVANR KP+ + TIS +G+L++L+ KK + W
Sbjct: 55 YVGIWFKK--VTPRVIVWVANREKPVSSTMANLTISSNGSLILLDSKKDLVWSSGGDPTS 112
Query: 121 XXXXTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRS 180
RA+LLD+GNLV+ DN++ +W SF+ DT + D+ KK LTSW+S
Sbjct: 113 NK--CRAELLDTGNLVVVDNVTGNYLWQSFEHLGDTMLPLTSLMYDIPNNKKRVLTSWKS 170
Query: 181 LSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGE 240
++PS G F A + +P + G+ PYWRSGPW G F GIP+M++ Y++ + +
Sbjct: 171 ETDPSPGEFVAEITP-QVPSQGLIRKGSSPYWRSGPWAGTRFTGIPEMDASYVNPLGMVQ 229
Query: 241 DHQKGTRYLTFAFADND--VFFALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCG 298
D GT F N + LTP+G+L +G +K +F P CD+YG+CG
Sbjct: 230 DEVNGTGVFAFCVLRNFNLSYIKLTPEGSLRITR-NNGTDWIK-HFEGPLTSCDLYGRCG 287
Query: 299 AFGSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGG---------------EVEGK-QDGF 342
FG C P+C CL GFEPK+ E+W GNWS G E +GK +D F
Sbjct: 288 PFGLCVRSGTPMCQCLKGFEPKSDEEWRSGNWSRGCVRRTNLSCQGNSSVETQGKDRDVF 347
Query: 343 FKLETMKVPYFAERSS-ANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSG 401
+ + +K P E +S +NE++C C NCSC A++Y G+GC++W L+D K G
Sbjct: 348 YHVSNIKPPDSYELASFSNEEQCHQGCLRNCSCTAFSYVSGIGCLVWNQELLDTVKFIGG 407
Query: 402 GTNLYIRVAHEELD-RKDMKXXXXXXXXXXXXXXXXCTFFA-WRWFAKRKAMKENSKVQR 459
G L +R+AH EL RK +K WR+ K+ SK
Sbjct: 408 GETLSLRLAHSELTGRKRIKIITVATLSLSVCLILVLVACGCWRYRVKQNGSSLVSK-DN 466
Query: 460 LDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDG 519
++ G ++ ++ V+ L F +L ATNNF + NKLGQGGFG VYKGKLQDG
Sbjct: 467 VE-GAWKSDLQSQDVS-----GLNFFEIHDLQTATNNFSVLNKLGQGGFGTVYKGKLQDG 520
Query: 520 QEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLD 579
+EIAVKRL+ +S QG EEFMNE+ +IS LQHRNL+RLLGCC++ EE +L+YEYM NKSLD
Sbjct: 521 KEIAVKRLTSSSVQGTEEFMNEIKLISKLQHRNLLRLLGCCIDGEEKLLVYEYMVNKSLD 580
Query: 580 SFLFD 584
F+FD
Sbjct: 581 IFIFD 585
|
|
| TAIR|locus:2197744 AT1G61420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1004 (358.5 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
Identities = 221/545 (40%), Positives = 310/545 (56%)
Query: 56 NFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWXXX 115
N N+Y+GIW+ G + VVWVANR KP+ DS+ IS +G+L++ NGK V W
Sbjct: 54 NSQNQYVGIWFK--GIIPRVVVWVANREKPVTDSTANLAISNNGSLLLFNGKHGVAWSSG 111
Query: 116 XXXXXXXXXTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQL 175
+RA+L D+GNL++ DN S ++W SF DT + +L TG+K L
Sbjct: 112 EALVSNG--SRAELSDTGNLIVIDNFSGRTLWQSFDHLGDTMLPSSTLKYNLATGEKQVL 169
Query: 176 TSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDG 235
+SW+S ++PS+G F + +P + G+ PY+RSGPW F GIP M+ +
Sbjct: 170 SSWKSYTDPSVGDFVLQITP-QVPTQVLVTKGSTPYYRSGPWAKTRFTGIPLMDDTFTGP 228
Query: 236 FNLGEDHQKGTRYLTFAFADNDVF--FALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDV 293
++ +D G+ LT+ ND LT +G +E +W +G + + F P + CD
Sbjct: 229 VSVQQD-TNGSGSLTY-LNRNDRLQRTMLTSKGT-QELSWHNGTDWV-LNFVAPEHSCDY 284
Query: 294 YGKCGAFGSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGGEV-------EGKQDG----- 341
YG CG FG C P C+C GF PK E+W RGNW+GG V +G G
Sbjct: 285 YGVCGPFGLCVKSVPPKCTCFKGFVPKLIEEWKRGNWTGGCVRRTELYCQGNSTGKYANV 344
Query: 342 FFKLETMKVPYFAERSS-ANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPS 400
F + +K P F E +S N ++C+ C +NCSC A+AY G+GC++W +L+D +
Sbjct: 345 FHPVARIKPPDFYEFASFVNVEECQKSCLHNCSCLAFAYIDGIGCLMWNQDLMDAVQFSE 404
Query: 401 GGTNLYIRVAHEELD-RKDMKXXXXXXXXXXXXXXXXCTFFAWRWFAKRKAMKENSKVQR 459
GG L IR+A EL K K F + W R +K N+ +
Sbjct: 405 GGELLSIRLARSELGGNKRKKAITASIVSLSLVVIIAFVAFCF-W---RYRVKHNADITT 460
Query: 460 LDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDG 519
D + ++ + + P + L F+ + ATNNF ++NKLGQGGFGPVYKGKLQDG
Sbjct: 461 -DASQV--SWRND-LKPQDVPGLDFFDMHTIQTATNNFSISNKLGQGGFGPVYKGKLQDG 516
Query: 520 QEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLD 579
+EIAVKRLS +SGQG+EEFMNE+++IS LQH+NLVR+LGCC+E EE +LIYE+M N SLD
Sbjct: 517 KEIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEEKLLIYEFMLNNSLD 576
Query: 580 SFLFD 584
+FLFD
Sbjct: 577 TFLFD 581
|
|
| TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 653 (234.9 bits), Expect = 5.0e-140, Sum P(3) = 5.0e-140
Identities = 150/439 (34%), Positives = 226/439 (51%)
Query: 1 MISVAIVVLLSSCFYSDFGTATATDTITSSQFIRDPESIIXXXXXXXXXXXXPDGNFTNR 60
M + ++ LL +S A ATD + ++Q ++D ++I+ P G+ NR
Sbjct: 1 MEATNVLHLLIISLFSTILLAQATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGS-RNR 59
Query: 61 YIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWXXXXXXXX 120
Y+GIWY K + +TVVWVANR+ PL D SG +SE+G+L + N + + W
Sbjct: 60 YLGIWYKK--ISLQTVVWVANRDSPLYDLSGTLKVSENGSLCLFNDRNHIIWSSSSSPSS 117
Query: 121 XXXXTR---AQLLDSGNLVLHDN-ISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLT 176
R Q+LD+GNLV+ ++ Q IW S P D F MK + TG LT
Sbjct: 118 QKASLRNPIVQILDTGNLVVRNSGDDQDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLT 177
Query: 177 SWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDM--NSVYLD 234
SWR++ +PS G+++ +D +P+ F+ N + R+GPWNG F G+P++ N +Y
Sbjct: 178 SWRAIDDPSTGNYTNKMDPNGVPQFFLKKNSVVVF-RTGPWNGLRFTGMPNLKPNPIYRY 236
Query: 235 GFNLGEDHQKGTRYLTFAFADNDVF--FALTPQGNLEERAWVDGKAHLKIYFFYPTNDCD 292
+ E+ Y T+ + V L P G L+ WVD Y + CD
Sbjct: 237 EYVFTEEEV----YYTYKLENPSVLTRMQLNPNGALQRYTWVDNLQSWNFYLSAMMDSCD 292
Query: 293 VYGKCGAFGSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGGEVE------GK-QDGFFKL 345
Y CG++GSCN + P C CL GF K + W G+WS G V GK +DGF K+
Sbjct: 293 QYTLCGSYGSCNINESPACRCLKGFVAKTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKI 352
Query: 346 ETMKVP-----YFAERSSANEDKCKDQCSNNCSCKAYA-YEI---GVGCMIWTHNLIDIR 396
+K+P ++ + NE CK C NC+C AY+ ++I G GC++W +LIDIR
Sbjct: 353 SKLKLPDTRTSWYDKNMDLNE--CKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIR 410
Query: 397 KLPSGGTNLYIRVAHEELD 415
+ G +LY+R+A E++
Sbjct: 411 EYNENGQDLYVRLASSEIE 429
|
|
| TAIR|locus:2197704 AT1G61390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1009 (360.2 bits), Expect = 8.1e-140, Sum P(2) = 8.1e-140
Identities = 220/598 (36%), Positives = 333/598 (55%)
Query: 6 IVVLLSSCFYSDFGTATATDTITSSQFIRDPESIIXXXXXXXXXXXXPDGNFTNRYIGIW 65
++++ + Y+D T++ ++ Q + P+ + P+ N +Y+GIW
Sbjct: 32 LLIIFPTFGYADINTSSP---LSIGQTLSSPDGVYELGFFS------PN-NSRKQYVGIW 81
Query: 66 YNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWXXXXXXXXXXXXT 125
+ A + VVWVANR+KP+ ++ TIS +G+L++L+G + V W
Sbjct: 82 FKN--IAPQVVVWVANRDKPVTKTAANLTISSNGSLILLDGTQDVIWSTGEAFTSNK--C 137
Query: 126 RAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPS 185
A+LLD+GNLV+ D++S ++W SF+ +T + V D+ GK LTSWRS S+PS
Sbjct: 138 HAELLDTGNLVVIDDVSGKTLWKSFENLGNTMLPQSSVMYDIPRGKNRVLTSWRSNSDPS 197
Query: 186 IGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDHQKG 245
G F+ P+ I G+ PYWRSGPW F GIP +++ Y+ F + +D KG
Sbjct: 198 PGEFTLEFTPQVPPQGLIR-RGSSPYWRSGPWAKTRFSGIPGIDASYVSPFTVLQDVAKG 256
Query: 246 TRYLTFAFADNDV--FFALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFGSC 303
T +++ N + LT +G ++ W DGK+ K++F PT+ CD+Y CG FG C
Sbjct: 257 TASFSYSMLRNYKLSYVTLTSEGKMKI-LWNDGKSW-KLHFEAPTSSCDLYRACGPFGLC 314
Query: 304 NSQKIPICSCLLGFEPKNAEDWNRGNWSGG---------------EVEGKQ-DGFFKLET 347
+ P C CL GF PK+ ++W +GNW+ G + +GK+ D F+ +
Sbjct: 315 VRSRNPKCICLKGFVPKSDDEWKKGNWTSGCVRRTQLSCHTNSSTKTQGKETDSFYHMTR 374
Query: 348 MKVPYFAERSS-ANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNLY 406
+K P + + N ++C C NCSC A+AY G+GC++W L+D + S G +L
Sbjct: 375 VKTPDLYQLAGFLNAEQCYQDCLGNCSCTAFAYISGIGCLVWNRELVDTVQFLSDGESLS 434
Query: 407 IRVAHEELDRKDMKXXXXXXXXXXXXXXXXCTFFAWRWFAKRKAMKENSKVQRLDLGEAY 466
+R+A EL + + F A++ + R E + + +A+
Sbjct: 435 LRLASSELAGSN-RTKIILGTTVSLSIFVILVFAAYKSWRYRTKQNEPNPMFIHSSQDAW 493
Query: 467 ANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKR 526
A + + P + + +F+ + ATNNF +NKLGQGGFGPVYKGKL DG+EIAVKR
Sbjct: 494 A----KDMEPQDVSGVNLFDMHTIRTATNNFSSSNKLGQGGFGPVYKGKLVDGKEIAVKR 549
Query: 527 LSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD 584
LS +SGQG +EFMNE+ +IS LQH+NLVRLLGCC++ EE +LIYEY+ NKSLD FLFD
Sbjct: 550 LSSSSGQGTDEFMNEIRLISKLQHKNLVRLLGCCIKGEEKLLIYEYLVNKSLDVFLFD 607
|
|
| TAIR|locus:2197664 AT1G61490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 998 (356.4 bits), Expect = 2.1e-139, Sum P(2) = 2.1e-139
Identities = 223/548 (40%), Positives = 316/548 (57%)
Query: 56 NFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWXXX 115
N N Y+GIW+ G + VVWVANR P D+S IS +G+L++ NGK V W
Sbjct: 54 NSQNLYVGIWFK--GIIPRVVVWVANRETPTTDTSANLAISSNGSLLLFNGKHGVVWSIG 111
Query: 116 XXXXXXXXXTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQL 175
+RA+L D+GNLV+ DN S ++W+SF+ DT + +L TG+K L
Sbjct: 112 ENFASNG--SRAELTDNGNLVVIDNASGRTLWESFEHFGDTMLPFSSLMYNLATGEKRVL 169
Query: 176 TSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDG 235
TSW++ ++PS G F G + +P + + G+ Y+R+GPW F GIP M+ Y
Sbjct: 170 TSWKTDTDPSPGVF-VGQITPQVPSQVLIMRGSTRYYRTGPWAKTRFTGIPLMDDTYASP 228
Query: 236 FNLGEDHQKGTRYLTF---AFADNDVFFALTPQGNLEERAWVDGKAHLKIYFFYPTNDCD 292
F+L +D G+ + T+ +F + + ++ +G+++ R +G ++ + P N CD
Sbjct: 229 FSLQQD-ANGSGFFTYFDRSFKLSRII--ISSEGSMK-RFRHNG-TDWELSYMAPANSCD 283
Query: 293 VYGKCGAFGSCNSQKIPI-CSCLLGFEPKNAEDWNRGNWSGG-----EV--EGKQDG--- 341
+YG CG FG C +P+ C CL GF P + E+W RGNW+GG E+ +G G
Sbjct: 284 IYGVCGPFGLC-IVSVPLKCKCLKGFVPHSTEEWKRGNWTGGCARLTELHCQGNSTGKDV 342
Query: 342 --FFKLETMKVPYFAE-RSSANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKL 398
F + +K+P F E SS + ++C C +NCSC A+AY G+GC+IW NL+D +
Sbjct: 343 NIFHPVTNVKLPDFYEYESSVDAEECHQSCLHNCSCLAFAYIHGIGCLIWNQNLMDAVQF 402
Query: 399 PSGGTNLYIRVAHEEL--DRKDMKXXXXXXXXXXXXXXXXCTFFAWRWFAKRKAMKENSK 456
+GG L IR+AH EL ++++ F WR+ K KA
Sbjct: 403 SAGGEILSIRLAHSELGGNKRNKIIVASTVSLSLFVILTSAAFGFWRYRVKHKAYT---- 458
Query: 457 VQRLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKL 516
L +A+ N K P L F + ATNNF L+NKLGQGGFG VYKGKL
Sbjct: 459 -----LKDAWRNDLKSKEVPG----LEFFEMNTIQTATNNFSLSNKLGQGGFGSVYKGKL 509
Query: 517 QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNK 576
QDG+EIAVK+LS +SGQG+EEFMNE+++IS LQHRNLVR+LGCC+E EE +LIYE+M NK
Sbjct: 510 QDGKEIAVKQLSSSSGQGKEEFMNEIVLISKLQHRNLVRVLGCCIEGEEKLLIYEFMLNK 569
Query: 577 SLDSFLFD 584
SLD+F+FD
Sbjct: 570 SLDTFVFD 577
|
|
| TAIR|locus:2197709 AT1G61480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 999 (356.7 bits), Expect = 6.5e-138, Sum P(2) = 6.5e-138
Identities = 220/545 (40%), Positives = 310/545 (56%)
Query: 56 NFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWXXX 115
N N+Y+GIW+ G + VVWVANR KP+ DS+ TIS +G+L++ N V W
Sbjct: 54 NSQNQYVGIWFK--GIIPRVVVWVANREKPVTDSAANLTISSNGSLLLFNENHSVVWSIG 111
Query: 116 XXXXXXXXXTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQL 175
+RA+L D+GNLV+ DN S ++W+SF+ DT + +L TG+K L
Sbjct: 112 ETFASNG--SRAELTDNGNLVVIDNNSGRTLWESFEHFGDTMLPFSNLMYNLATGEKRVL 169
Query: 176 TSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDG 235
TSW+S ++PS G F+ + +P + G++ YWRSGPW F GIP M+ Y
Sbjct: 170 TSWKSHTDPSPGDFTVQITP-QVPSQACTMRGSKTYWRSGPWAKTRFTGIPVMDDTYTSP 228
Query: 236 FNLGEDHQKGTRYLTFAFADNDV--FFALTPQGNLEERAWVDGKAHLKIYFFYPTNDCDV 293
F+L +D G+ T+ F N + +T +G+L + + ++ F P N CD+
Sbjct: 229 FSLQQD-TNGSGSFTY-FERNFKLSYIMITSEGSL--KIFQHNGMDWELNFEAPENSCDI 284
Query: 294 YGKCGAFGSCNSQKIPICSCLLGFEPKNAEDWNRGNWSGGEVE-----------GKQ-DG 341
YG CG FG C P C C GF PK+ E+W RGNW+ G V GK +G
Sbjct: 285 YGFCGPFGICVMSVPPKCKCFKGFVPKSIEEWKRGNWTDGCVRHTELHCQGNTNGKTVNG 344
Query: 342 FFKLETMKVPYFAERSS-ANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPS 400
F+ + +K P F E +S + + C C +NCSC A+AY G+GC++W +L+D + +
Sbjct: 345 FYHVANIKPPDFYEFASFVDAEGCYQICLHNCSCLAFAYINGIGCLMWNQDLMDAVQFSA 404
Query: 401 GGTNLYIRVAHEELDRKDMKXXXXXXXXXXXXXXXXCTFFAWRWFAKRKAMKE-NSKVQR 459
GG L IR+A EL K FA F + K ++K+ +
Sbjct: 405 GGEILSIRLASSELGGN--KRNKIIVASIVSLSLFVILAFAAFCFLRYKVKHTVSAKISK 462
Query: 460 LDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDG 519
+ EA+ N + P + L F + AT+NF L+NKLGQGGFG VYKGKLQDG
Sbjct: 463 IASKEAWNN----DLEPQDVSGLKFFEMNTIQTATDNFSLSNKLGQGGFGSVYKGKLQDG 518
Query: 520 QEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLD 579
+EIAVKRLS +SGQG+EEFMNE+++IS LQH+NLVR+LGCC+E EE +L+YE++ NKSLD
Sbjct: 519 KEIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEERLLVYEFLLNKSLD 578
Query: 580 SFLFD 584
+FLFD
Sbjct: 579 TFLFD 583
|
|
| TAIR|locus:2200923 AT1G61550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 981 (350.4 bits), Expect = 2.8e-135, Sum P(2) = 2.8e-135
Identities = 224/596 (37%), Positives = 318/596 (53%)
Query: 9 LLSSCFYS-DFGTATATDTITSSQFIRDPESIIXXXXXXXXXXXXPDGNFTNRYIGIWYN 67
L S+ S + T T ++ Q + P I P+ N N Y+GIW+
Sbjct: 8 LFSTLLLSFSYAAITPTSPLSIGQTLSSPNGIFELGFFS------PN-NSRNLYVGIWFK 60
Query: 68 KGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWXXXXXXXXXXXXTRA 127
G +TVVWVANR + D++ IS +G+L++ +GK W A
Sbjct: 61 --GIIPRTVVWVANRENSVTDATADLAISSNGSLLLFDGKHSTVWSTGETFASNGSS--A 116
Query: 128 QLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPSIG 187
+L DSGNL++ D +S +++W SF+ DT + + TG+K L+SW+S ++P G
Sbjct: 117 ELSDSGNLLVIDKVSGITLWQSFEHLGDTMLPYSSLMYNPGTGEKRVLSSWKSYTDPLPG 176
Query: 188 SFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDHQKGTR 247
F + + P+ FI + G++PYWRSGPW F G+P + Y F++ +D G+
Sbjct: 177 EFVGYITTQVPPQGFI-MRGSKPYWRSGPWAKTRFTGVPLTDESYTHPFSVQQD-ANGSV 234
Query: 248 YLTFAFAD-NDVFFALTPQGNLE--ERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFGSCN 304
Y + + LT +G+L+ D ++ + P N CD YG CG FG C
Sbjct: 235 YFSHLQRNFKRSLLVLTSEGSLKVTHHNGTDWVLNIDV----PANTCDFYGVCGPFGLCV 290
Query: 305 SQKIPICSCLLGFEPKNAEDWNRGNWSGGEV-------EGKQDG-----FFKLETMKVPY 352
P C C GF P+ +E+W RGNW+GG V +G G F + +K P
Sbjct: 291 MSIPPKCKCFKGFVPQFSEEWKRGNWTGGCVRRTELLCQGNSTGRHVNVFHPVANIKPPD 350
Query: 353 FAER-SSANEDKCKDQCSNNCSCKAYAYEIGVGCMIWTHNLIDIRKLPSGGTNLYIRVAH 411
F E SS + ++C C +NCSC A+AY G+GC+IW L+D+ + GG L IR+A
Sbjct: 351 FYEFVSSGSAEECYQSCLHNCSCLAFAYINGIGCLIWNQELMDVMQFSVGGELLSIRLAS 410
Query: 412 EELDRKDMKXXXXXXXXXXXX--XXXXCTFFAWRWFAKRKAMKENSKVQRLDLGEAYAN- 468
E+ K F WR+ +K N+ V ++ L A+ N
Sbjct: 411 SEMGGNQRKKTIIASIVSISLFVTLASAAFGFWRY-----RLKHNAIVSKVSLQGAWRND 465
Query: 469 FSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLS 528
+E V+ L F + + ATNNF L NKLGQGGFGPVYKGKLQDG+EIAVKRLS
Sbjct: 466 LKSEDVS-----GLYFFEMKTIEIATNNFSLVNKLGQGGFGPVYKGKLQDGKEIAVKRLS 520
Query: 529 KASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD 584
+SGQG+EEFMNE+++IS LQH NLVR+LGCC+E EE +L+YE+M NKSLD+F+FD
Sbjct: 521 SSSGQGKEEFMNEILLISKLQHINLVRILGCCIEGEERLLVYEFMVNKSLDTFIFD 576
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SXB8 | Y1133_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.4658 | 0.9578 | 0.8646 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.914 |
| 3rd Layer | 2.7.11 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 760 | |||
| pfam01453 | 109 | pfam01453, B_lectin, D-mannose binding lectin | 4e-35 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 3e-31 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 4e-31 | |
| cd00028 | 116 | cd00028, B_lectin, Bulb-type mannose-specific lect | 2e-30 | |
| smart00108 | 114 | smart00108, B_lectin, Bulb-type mannose-specific l | 6e-30 | |
| pfam00954 | 110 | pfam00954, S_locus_glycop, S-locus glycoprotein fa | 2e-29 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 2e-27 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 3e-27 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-26 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 4e-26 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-24 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 9e-24 | |
| cd01098 | 84 | cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain | 5e-22 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 6e-21 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 1e-19 | |
| pfam08276 | 66 | pfam08276, PAN_2, PAN-like domain | 1e-17 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-17 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 1e-16 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-16 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-16 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 2e-16 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 3e-16 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 6e-16 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 1e-15 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-15 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 3e-15 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 4e-15 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 7e-15 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 8e-15 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 5e-14 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 1e-13 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 1e-13 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 2e-13 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 3e-13 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 5e-13 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 1e-12 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 1e-12 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 2e-12 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 3e-12 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 5e-12 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 5e-12 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 5e-12 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 8e-12 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 9e-12 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 1e-11 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 4e-11 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 4e-11 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 5e-11 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 9e-11 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-10 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 1e-10 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 1e-10 | |
| smart00473 | 78 | smart00473, PAN_AP, divergent subfamily of APPLE d | 2e-10 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 2e-10 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 4e-10 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 5e-10 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 7e-10 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 9e-10 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 1e-09 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 1e-09 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-09 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 2e-09 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 2e-09 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-09 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 2e-09 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 2e-09 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 2e-09 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 2e-09 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 3e-09 | |
| pfam11883 | 48 | pfam11883, DUF3403, Domain of unknown function (DU | 4e-09 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 4e-09 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 4e-09 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 4e-09 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 6e-09 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 6e-09 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 6e-09 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 7e-09 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 7e-09 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 9e-09 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 9e-09 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 2e-08 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 2e-08 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 2e-08 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 2e-08 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 2e-08 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 2e-08 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 3e-08 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 4e-08 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 5e-08 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 5e-08 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 6e-08 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 7e-08 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 1e-07 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 1e-07 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 1e-07 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 2e-07 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 2e-07 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 2e-07 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 3e-07 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 3e-07 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 3e-07 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 3e-07 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 3e-07 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 4e-07 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 4e-07 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 4e-07 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 5e-07 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 5e-07 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 5e-07 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 6e-07 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 6e-07 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 7e-07 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 7e-07 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 8e-07 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 8e-07 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 8e-07 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 9e-07 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 1e-06 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 1e-06 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 1e-06 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 1e-06 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 2e-06 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 2e-06 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 2e-06 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 2e-06 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 3e-06 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 3e-06 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 3e-06 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 3e-06 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 3e-06 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 3e-06 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 4e-06 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 4e-06 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 5e-06 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 7e-06 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 7e-06 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 8e-06 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 9e-06 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 1e-05 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 1e-05 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 1e-05 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 2e-05 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 2e-05 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 3e-05 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-05 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 3e-05 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 3e-05 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 3e-05 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 3e-05 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 4e-05 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 5e-05 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 6e-05 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 6e-05 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 6e-05 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 6e-05 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 7e-05 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 8e-05 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 1e-04 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 1e-04 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 1e-04 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 1e-04 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 1e-04 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 1e-04 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 2e-04 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 2e-04 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 2e-04 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 2e-04 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 2e-04 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-04 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 2e-04 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 3e-04 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 3e-04 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 3e-04 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 3e-04 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 3e-04 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 3e-04 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 3e-04 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 4e-04 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 4e-04 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 4e-04 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 4e-04 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 4e-04 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 8e-04 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 8e-04 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 0.001 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 0.001 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 0.001 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 0.001 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 0.002 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 0.002 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 0.002 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 0.002 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 0.002 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 0.002 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 0.002 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 0.003 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 0.003 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 0.003 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 0.003 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 0.003 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 0.004 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 0.004 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 0.004 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 0.004 |
| >gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 4e-35
Identities = 54/113 (47%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 73 NKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDS 132
N+TVVWVANR PL DSS + DGNLV+ +G +V WSSN S S A L D
Sbjct: 1 NQTVVWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSG--KGSGCVAVLQDD 58
Query: 133 GNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPS 185
GNLVL+DN S +W SF PTDT K ++ G +LTSW+S ++PS
Sbjct: 59 GNLVLYDN-SGKVLWQSFDHPTDTLLPGQKD-GNVVIGGSRRLTSWKSNTDPS 109
|
These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 3e-31
Identities = 79/280 (28%), Positives = 113/280 (40%), Gaps = 89/280 (31%)
Query: 498 QLANKLGQGGFGPVYKGKLQD-----GQEIAVKRLSK-ASGQGQEEFMNEVMVISNLQHR 551
L KLG+G FG VYKGKL+ E+AVK L + AS Q EEF+ E ++ L H
Sbjct: 2 TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLD----------------SFLF------------ 583
N+V+LLG C E E ++ EYM L SF
Sbjct: 62 NVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESK 121
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
DFGL+R + D + +M+PE EG+F
Sbjct: 122 NFIHRDLAARNCLVGENLVVKISDFGLSR-DLYDDDYYRKRGGKLPIRWMAPESLKEGKF 180
Query: 621 SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLG---YAWKLWNDNNVIDLVDPLISE 677
+ KSDV+SFGVLL EI + LG Y + V++ + +
Sbjct: 181 TSKSDVWSFGVLLWEIFT----------------LGEQPYPGMSNEE--VLEYL-----K 217
Query: 678 SGFKMEII-RC----VNVGLLCVQEFVKDRPNMPTVVSML 712
+G+++ C ++ L C E +DRP +V +L
Sbjct: 218 NGYRLPQPPNCPPELYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 4e-31
Identities = 80/281 (28%), Positives = 115/281 (40%), Gaps = 92/281 (32%)
Query: 499 LANKLGQGGFGPVYKGKLQDG-----QEIAVKRLSK-ASGQGQEEFMNEVMVISNLQHRN 552
L KLG+G FG VYKG L+ E+AVK L + AS Q EEF+ E ++ L H N
Sbjct: 3 LGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLD-----------------SFLF------------ 583
+V+LLG C E E M++ EYMP L SF
Sbjct: 63 IVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK 122
Query: 584 -----------------------DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGR 619
DFGL+R ++ + + +L +M+PE EG+
Sbjct: 123 NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKL--PIRWMAPESLKEGK 180
Query: 620 FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLG---YAWKLWNDNNVIDLVDPLIS 676
F+ KSDV+SFGVLL EI + LG Y + V++ +
Sbjct: 181 FTSKSDVWSFGVLLWEIFT----------------LGEEPYPGMSNAE--VLEYL----- 217
Query: 677 ESGFKMEII-RC----VNVGLLCVQEFVKDRPNMPTVVSML 712
+ G+++ C + L C E +DRP +V +L
Sbjct: 218 KKGYRLPKPPNCPPELYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 2e-30
Identities = 51/124 (41%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 30 SQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDS 89
S + ++++SSGS F+LGFF Y I Y ++TVVWVANR+ P S
Sbjct: 1 SNPLSSGQTLVSSGSLFELGFFKLIMQS-RDYNLILYKGS---SRTVVWVANRDNPS-GS 55
Query: 90 SGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDS 149
S T+ DGNLV+ +G V WSSN + N N LLD GNLVL+D+ +W S
Sbjct: 56 SCTLTLQSDGNLVIYDGSGTVVWSSNTTR--VNGNYVLVLLDDGNLVLYDSDGNF-LWQS 112
Query: 150 FQEP 153
F P
Sbjct: 113 FDYP 116
|
The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116 |
| >gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 6e-30
Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 30 SQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDS 89
S + ++++S S F+LGFF+ N Y I Y ++TVVWVANR+ P+
Sbjct: 1 SNTLSSGQTLVSGNSLFELGFFTL--IMQNDYNLILYKSS---SRTVVWVANRDNPV-SD 54
Query: 90 SGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDS 149
S T+ DGNLV+ +G +V WSSN + N N LLD GNLV++D+ +W S
Sbjct: 55 SCTLTLQSDGNLVLYDGDGRVVWSSNTTG--ANGNYVLVLLDDGNLVIYDS-DGNFLWQS 111
Query: 150 F 150
F
Sbjct: 112 F 112
|
Length = 114 |
| >gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 2e-29
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 212 WRSGPWNGRYFIGIPDM--NSVYLDGFNLGEDHQKGTRYLTFAFADNDVF--FALTPQGN 267
WRSGPWNG F GIP+M S Y+ F Y T+ +N ++ L+ +G+
Sbjct: 1 WRSGPWNGIRFSGIPEMQKLSYYVYNFTE----NNEEVYYTYRMTNNSIYSRLTLSSEGS 56
Query: 268 LEERAWVDGKAHLKIYFFYPTNDCDVYGKCGAFGSCNSQKIPICSCLLGFEPKN 321
LE W+ +++ P + CDVYG+CG +G C+ P C+C+ GF PKN
Sbjct: 57 LERFTWIPNSQDWNLFWSAPKDQCDVYGRCGPYGYCDVNTSPKCNCIKGFVPKN 110
|
In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 2e-27
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 57/189 (30%)
Query: 503 LGQGGFGPVYKGK-LQDGQEIAVKRLSK-ASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
LG+GGFG VY + + G+++A+K + K S EE + E+ ++ L H N+V+L G
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 561 VEREENMLIYEYMPNKSLDSFLF------------------------------------- 583
+ L+ EY SL L
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKP 120
Query: 584 ---------------DFGLARIFGGNQDQAATKRLVGTYGYMSPE-YAMEGRFSEKSDVF 627
DFGL+++ ++ K +VGT YM+PE +G +SEKSD++
Sbjct: 121 ENILLDSDNGKVKLADFGLSKLLTSDKSL--LKTIVGTPAYMAPEVLLGKGYYSEKSDIW 178
Query: 628 SFGVLLLEI 636
S GV+L E+
Sbjct: 179 SLGVILYEL 187
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 3e-27
Identities = 56/196 (28%), Positives = 83/196 (42%), Gaps = 59/196 (30%)
Query: 502 KLGQGGFGPVYKGKL-----QDGQEIAVKRL-SKASGQGQEEFMNEVMVISNLQHRNLVR 555
KLG+G FG VYKG L ++AVK L AS + +EEF+ E ++ L H N+VR
Sbjct: 6 KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65
Query: 556 LLGCCVEREENMLIYE---------YMPNKS----------------------------- 577
LLG C + E ++ E ++
Sbjct: 66 LLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESKNFVH 125
Query: 578 ---------LDSFLF----DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEK 623
+ L DFGL+R I+ + + + +M+PE +G+F+ K
Sbjct: 126 RDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKL-PIKWMAPESLKDGKFTSK 184
Query: 624 SDVFSFGVLLLEIVSG 639
SDV+SFGVLL EI +
Sbjct: 185 SDVWSFGVLLWEIFTL 200
|
Length = 258 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 2e-26
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 55/200 (27%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQD-GQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHRN 552
+ LG+G FG VY +D G+ +AVK LS S + E E+ ++S+LQH N
Sbjct: 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN 60
Query: 553 LVRLLGCCVEREENML-IY-EYMPNKSLDSF----------------------------- 581
+VR G + E+N L I+ EY+ SL S
Sbjct: 61 IVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN 120
Query: 582 ---------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
L DFG A+ G + T + GT +M+PE +
Sbjct: 121 GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEY 180
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
+D++S G ++E+ +G+
Sbjct: 181 GRAADIWSLGCTVIEMATGK 200
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 4e-26
Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 57/211 (27%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE-FMNEVMVISNLQHRNLV 554
+++ KLG+G FG VY + + G+ +A+K + K + E + E+ ++ L+H N+V
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF--------------------------------- 581
RL + ++ L+ EY L
Sbjct: 61 RLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVH 120
Query: 582 --------LFD---------FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
L D FGLAR + VGT YM+PE + + +
Sbjct: 121 RDLKPENILLDEDGHVKLADFGLARQLDPGE---KLTTFVGTPEYMAPEVLLGKGYGKAV 177
Query: 625 DVFSFGVLLLEIVSGRKNTSFYHEEFELTLL 655
D++S GV+L E+++G+ F ++ L L
Sbjct: 178 DIWSLGVILYELLTGK--PPFPGDDQLLELF 206
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 101 bits (255), Expect = 4e-24
Identities = 54/207 (26%), Positives = 82/207 (39%), Gaps = 58/207 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSK--ASGQGQEEFMNEVMVISNLQHRNL 553
++L KLG G FG VYK K + G+ +AVK L K + + E+ ++ L H N+
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60
Query: 554 VRLLGCCVEREENMLIYEYMPNKSLDSFLF------------------------------ 583
VRL+ +++ L+ EY L +L
Sbjct: 61 VRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGII 120
Query: 584 --------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-FSE 622
DFGLA+ + T VGT YM+PE + G +
Sbjct: 121 HRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTT--FVGTPWYMAPEVLLGGNGYGP 178
Query: 623 KSDVFSFGVLLLEIVSGRKNTSFYHEE 649
K DV+S GV+L E+++G+ F E
Sbjct: 179 KVDVWSLGVILYELLTGK--PPFSGEN 203
|
Length = 260 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 9e-24
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 501 NKLGQGGFGPVYKGKLQDGQ----EIAVKRLSK-ASGQGQEEFMNEVMVISNLQHRNLVR 555
KLG+G FG VYKGKL+ E+AVK L + AS + +++F+ E V+ L H N+VR
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFL 582
LLG C E E L+ EYM L +L
Sbjct: 61 LLGVCTEEEPLYLVLEYMEGGDLLDYL 87
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins | Back alignment and domain information |
|---|
Score = 90.2 bits (224), Expect = 5e-22
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 336 EGKQDGFFKLETMKVPYFAERSSA-NEDKCKDQCSNNCSCKAYAY-EIGVGCMIWTHNLI 393
+G DGF KL +K+P A +A + ++C++ C +NCSC AYAY GC++W L
Sbjct: 8 DGSTDGFLKLPDVKLPDNASAITAISLEECREACLSNCSCTAYAYNNGSGGCLLWNGLLN 67
Query: 394 DIRKLPSGGTNLYIRVA 410
++R L SGG LY+R+A
Sbjct: 68 NLRSLSSGGGTLYLRLA 84
|
PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 92.9 bits (231), Expect = 6e-21
Identities = 61/219 (27%), Positives = 88/219 (40%), Gaps = 63/219 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRL 556
F L KLG G FG V++G ++ +A+K L Q++F EV + L+H++L+ L
Sbjct: 8 FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67
Query: 557 LGCCVEREENMLIYEYMPNKSLDSF-------------LFDFGLARIFGG---------- 593
C E +I E M SL +F L D ++ G
Sbjct: 68 FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMA-CQVAEGMAYLEEQNSI 126
Query: 594 NQDQAATKRLVGT----------------------------YGYMSPEYAMEGRFSEKSD 625
++D AA LVG Y + +PE A G FS KSD
Sbjct: 127 HRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSD 186
Query: 626 VFSFGVLLLEIVS-------GRKNTSFYHEEFELTLLGY 657
V+SFG+LL E+ + G N HE ++ GY
Sbjct: 187 VWSFGILLYEMFTYGQVPYPGMNN----HEVYDQITAGY 221
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 1e-19
Identities = 63/199 (31%), Positives = 85/199 (42%), Gaps = 55/199 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLG G FG V+ G ++AVK L K E F+ E ++ L+H LV
Sbjct: 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLV 64
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------FDFGLARIFGG-------- 593
+L C E E ++ EYM SL FL D A+I G
Sbjct: 65 QLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMA-AQIAEGMAYLESRN 123
Query: 594 --NQDQAATKRLVGT--------YG---------------------YMSPEYAMEGRFSE 622
++D AA LVG +G + +PE A GRF+
Sbjct: 124 YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTI 183
Query: 623 KSDVFSFGVLLLEIVS-GR 640
KSDV+SFG+LL EIV+ GR
Sbjct: 184 KSDVWSFGILLTEIVTYGR 202
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 1e-17
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 337 GKQDGFFKLETMKVPYFAERS---SANEDKCKDQCSNNCSCKAYAY---EIGVGCMIWTH 390
G DGF +L MK+P S +C+ +C +NCSC AYAY G GC+IWT
Sbjct: 2 GGGDGFLRLPNMKLPDTTAAIVDRSIGLKECEQRCLSNCSCTAYAYADIRGGSGCLIWTG 61
Query: 391 NLIDI 395
L+D+
Sbjct: 62 ELVDM 66
|
Length = 66 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 82.8 bits (205), Expect = 2e-17
Identities = 61/194 (31%), Positives = 83/194 (42%), Gaps = 50/194 (25%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +G+G FG V G + GQ++AVK L S Q F+ E V++ L+H NLV
Sbjct: 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQA-FLAEASVMTTLRHPNLV 63
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQ------------------- 595
+LLG ++ ++ EYM SL +L G A I Q
Sbjct: 64 QLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNF 123
Query: 596 ---DQAATKRL--------VGTYG-----------------YMSPEYAMEGRFSEKSDVF 627
D AA L V +G + +PE E +FS KSDV+
Sbjct: 124 VHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVW 183
Query: 628 SFGVLLLEIVS-GR 640
SFG+LL EI S GR
Sbjct: 184 SFGILLWEIYSFGR 197
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 80.7 bits (199), Expect = 1e-16
Identities = 59/206 (28%), Positives = 85/206 (41%), Gaps = 70/206 (33%)
Query: 503 LGQGGFGPVYKGKLQD-------GQEIAVKRLSK-ASGQGQEEFMNEVMVISNLQHRNLV 554
LG G FG VY+G D +AVK L K A+ Q ++EF+ E ++SN H N+V
Sbjct: 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGG--------------------- 593
+LLG C+ E +I E M L S+L D + R
Sbjct: 63 KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL 122
Query: 594 ------NQDQAATKRLVGTYGY-----------------------------------MSP 612
++D AA LV GY M+P
Sbjct: 123 EQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAP 182
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS 638
E ++G+F+ +SDV+SFGVL+ EI++
Sbjct: 183 ESLLDGKFTTQSDVWSFGVLMWEILT 208
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 1e-16
Identities = 56/198 (28%), Positives = 82/198 (41%), Gaps = 53/198 (26%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ QL KLG G FG V++G + +AVK L K ++F+ E ++ L+H L+
Sbjct: 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLI 64
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFLFDFGL------------ARIFGG--------- 593
+L C E ++ E M SL +L A++ G
Sbjct: 65 QLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY 124
Query: 594 -NQDQAATKRLVGTYG-----------------------------YMSPEYAMEGRFSEK 623
++D AA LVG + +PE A+ RFS K
Sbjct: 125 IHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIK 184
Query: 624 SDVFSFGVLLLEIVS-GR 640
SDV+SFG+LL EIV+ GR
Sbjct: 185 SDVWSFGILLTEIVTYGR 202
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 2e-16
Identities = 58/197 (29%), Positives = 80/197 (40%), Gaps = 63/197 (31%)
Query: 501 NKLGQGGFGPVYKGKLQ--DGQEI--AVKRLSK-ASGQGQEEFMNEVMVISNLQHRNLVR 555
+LG G FG V KG G+E+ AVK L + G++EF+ E V++ L H +VR
Sbjct: 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFL-----------------------------F--- 583
L+G C E ML+ E P L +L F
Sbjct: 61 LIGVCKG-EPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHR 119
Query: 584 ------------------DFGLARIFGGNQD--QAAT--KRLVGTYGYMSPEYAMEGRFS 621
DFG++R G D +A T + + Y +PE G+FS
Sbjct: 120 DLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWY---APECINYGKFS 176
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV+S+GV L E S
Sbjct: 177 SKSDVWSYGVTLWEAFS 193
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 2e-16
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 59/197 (29%)
Query: 503 LGQGGFGPVYKGK-LQDGQ----EIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRL 556
LG G FG VYKG + +G+ +A+K L + + + +E ++E V++++ H ++VRL
Sbjct: 15 LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFLFD-------------------------------- 584
LG C+ + LI + MP L ++ +
Sbjct: 75 LGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHR 133
Query: 585 -------------------FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSD 625
FGLA++ ++ + + +M+ E + ++ KSD
Sbjct: 134 DLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSD 193
Query: 626 VFSFGVLLLEIVS-GRK 641
V+S+GV + E+++ G K
Sbjct: 194 VWSYGVTVWELMTFGAK 210
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 79.1 bits (196), Expect = 3e-16
Identities = 45/203 (22%), Positives = 81/203 (39%), Gaps = 59/203 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKR--LSKASGQGQEEFMNEVMVISNLQHRN 552
+++ ++G+G FG VY + DG+ +K LS S + +E+ +NEV ++ L H N
Sbjct: 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDS-------------------------------- 580
+++ E+ + ++ EY L
Sbjct: 61 IIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120
Query: 581 --------------FLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
FL DFG++++ D A T +VGT Y+SPE
Sbjct: 121 SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKT--VVGTPYYLSPELCQNK 178
Query: 619 RFSEKSDVFSFGVLLLEIVSGRK 641
++ KSD++S G +L E+ + +
Sbjct: 179 PYNYKSDIWSLGCVLYELCTLKH 201
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 6e-16
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 51/189 (26%)
Query: 503 LGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE 562
LG G FG V+ GK + ++A+K + + + +++F+ E V+ L H NLV+L G C +
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70
Query: 563 REENMLIYEYMPNKSLDSFLFD----FGLARIFGG-----------------NQDQAATK 601
+ ++ EYM N L ++L + G + ++D AA
Sbjct: 71 QRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARN 130
Query: 602 RLVGTYG-----------------------------YMSPEYAMEGRFSEKSDVFSFGVL 632
LVG + PE RFS KSDV+SFGVL
Sbjct: 131 CLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVL 190
Query: 633 LLEIVSGRK 641
+ E+ S K
Sbjct: 191 MWEVFSEGK 199
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 1e-15
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 496 NFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSK-ASGQGQEEFMNEVMVISNL 548
+ +LG+G FG VYKG+L +A+K L + A + Q+EF E ++S+L
Sbjct: 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL 65
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
QH N+V LLG C + + +++EY+ + L FL
Sbjct: 66 QHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFL 99
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 2e-15
Identities = 52/211 (24%), Positives = 83/211 (39%), Gaps = 63/211 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK---LQDGQ--EIAVKRLSKASG-QGQEEFMNEVMVISNLQ 549
+ + +LG+G FG V + L D ++AVK L+ + Q + +F E+ ++ L
Sbjct: 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD 64
Query: 550 HRNLVRLLGCCVEREEN--MLIYEYMPNKSLDSF--------------LF---------- 583
H N+V+ G C + LI EY+P+ SL + LF
Sbjct: 65 HENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDY 124
Query: 584 ---------------------------DFGLARIFGGNQD--QAATKRLVGTYGYMSPEY 614
DFGLA++ ++D + Y +PE
Sbjct: 125 LGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWY-APEC 183
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVS-GRKNTS 644
+FS SDV+SFGV L E+ + G + S
Sbjct: 184 LRTSKFSSASDVWSFGVTLYELFTYGDPSQS 214
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 3e-15
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 7/91 (7%)
Query: 499 LANKLGQGGFGPVYKGKL------QDGQEIAVKRLSK-ASGQGQEEFMNEVMVISNLQHR 551
L +LG+G FG V+ G+ D + +AVK L + AS +++F E +++N QH
Sbjct: 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
N+V+ G C E + ++++EYM + L+ FL
Sbjct: 69 NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFL 99
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 75.6 bits (186), Expect = 4e-15
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 57/200 (28%)
Query: 496 NFQLANKLGQGGFGPVYKG-KLQDGQEIAVKR--LSKASGQGQEEFMNEVMVISNLQHRN 552
+F++ NK+G+G FG V+K + D + A+K+ LSK + + +EE ++E V++ L
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60
Query: 553 LVRLLGCCVEREENMLIYEYMPN------------------------------------- 575
++R +++ + ++ EY N
Sbjct: 61 IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120
Query: 576 -------KSLDSFL--------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
KSL+ FL D G+A++ N + A T +VGT Y+SPE + +
Sbjct: 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT--IVGTPYYLSPELCEDKPY 178
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
+EKSDV++ GV+L E +G+
Sbjct: 179 NEKSDVWALGVVLYECCTGK 198
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 7e-15
Identities = 50/191 (26%), Positives = 76/191 (39%), Gaps = 54/191 (28%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLLGCC 560
K+G+G FG VYKG L+ E+AVK +F+ E ++ H N+V+L+G C
Sbjct: 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61
Query: 561 VEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQ----------------------DQA 598
V+++ ++ E +P SL +FL R+ D A
Sbjct: 62 VQKQPIYIVMELVPGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLA 120
Query: 599 ATKRLVGTYGY-------MSPE-----YAMEG------------------RFSEKSDVFS 628
A LVG MS E Y + R++ +SDV+S
Sbjct: 121 ARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWS 180
Query: 629 FGVLLLEIVSG 639
+G+LL E S
Sbjct: 181 YGILLWETFSL 191
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 8e-15
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 55/198 (27%)
Query: 496 NFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLS--KASGQGQEEFMNEVMVISNLQHRN 552
N+QL + +G+G FG VYKG L+ G +A+K++S K + + M E+ ++ NL+H N
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60
Query: 553 LVRLLGCCVEREENMLIY-EYMPNKSLDSFLFDFGL------------------------ 587
+V+ +G +E +++ I EY N SL + FG
Sbjct: 61 IVKYIG-SIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG 119
Query: 588 --------ARI------------FG----GNQDQAATKRLVGTYGYMSPE-YAMEGRFSE 622
A I FG N +VGT +M+PE M G S
Sbjct: 120 VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGA-ST 178
Query: 623 KSDVFSFGVLLLEIVSGR 640
SD++S G ++E+++G
Sbjct: 179 ASDIWSLGCTVIELLTGN 196
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 72.3 bits (177), Expect = 5e-14
Identities = 60/203 (29%), Positives = 82/203 (40%), Gaps = 60/203 (29%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN 552
+ QL KLG G FG V+ G ++AVK L K E F+ E ++ L+H
Sbjct: 4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRHDK 62
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFD---------------------------- 584
LV+L V E ++ EYM SL FL D
Sbjct: 63 LVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 121
Query: 585 ------------------------FGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEG 618
FGLAR+ +D T R + + +PE A+ G
Sbjct: 122 NYIHRDLRSANILVGDGLVCKIADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYG 178
Query: 619 RFSEKSDVFSFGVLLLEIVS-GR 640
RF+ KSDV+SFG+LL E+V+ GR
Sbjct: 179 RFTIKSDVWSFGILLTELVTKGR 201
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 71.5 bits (175), Expect = 1e-13
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 59/194 (30%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
L ++G G FG V+ G + +++A+K + + + +E+F+ E V+ L H LV+L G
Sbjct: 8 LVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYG 66
Query: 559 CCVEREENMLIYEYMPNKSLDSF------------------------------------- 581
C ER L++E+M + L +
Sbjct: 67 VCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDL 126
Query: 582 --------------LFDFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRFSEKS 624
+ DFG+ R +Q ++T GT + SPE ++S KS
Sbjct: 127 AARNCLVGENQVVKVSDFGMTRFVLDDQYTSST----GTKFPVKWSSPEVFSFSKYSSKS 182
Query: 625 DVFSFGVLLLEIVS 638
DV+SFGVL+ E+ S
Sbjct: 183 DVWSFGVLMWEVFS 196
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 1e-13
Identities = 55/192 (28%), Positives = 80/192 (41%), Gaps = 53/192 (27%)
Query: 499 LANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLL 557
+ +KLG G +G VY+G + +AVK L K EEF+ E V+ ++H NLV+LL
Sbjct: 10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 68
Query: 558 GCCVEREENMLIYEYMPNKSLDSFLFD-------------------FGLARIFGGN---Q 595
G C +I E+M +L +L + + + N +
Sbjct: 69 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 128
Query: 596 DQAATKRLVG-------------------TY----------GYMSPEYAMEGRFSEKSDV 626
D AA LVG TY + +PE +FS KSDV
Sbjct: 129 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 188
Query: 627 FSFGVLLLEIVS 638
++FGVLL EI +
Sbjct: 189 WAFGVLLWEIAT 200
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 2e-13
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQ----DGQEIAVK---RLSKASGQGQEEFMNEVMVISNL 548
+ L LG G FG VY+G + D E+ V S Q + +F+ E +++S
Sbjct: 7 SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF 66
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H+N+VRL+G ER ++ E M L SFL
Sbjct: 67 NHQNIVRLIGVSFERLPRFILLELMAGGDLKSFL 100
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 3e-13
Identities = 46/220 (20%), Positives = 88/220 (40%), Gaps = 60/220 (27%)
Query: 472 EKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA 530
E+ A L+D++ + ++ K+G+G G VYK G+E+A+K++ +
Sbjct: 1 EEELKAALKDIV-----SEGDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKM-RL 54
Query: 531 SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL------------ 578
Q +E +NE++++ + +H N+V + +E ++ EYM SL
Sbjct: 55 RKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMN 114
Query: 579 ------------------------------DSFLF---------DFGLARIFGGNQDQAA 599
D+ L DFG A + +
Sbjct: 115 EPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRN 174
Query: 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639
+ +VGT +M+PE + K D++S G++ +E+ G
Sbjct: 175 S--VVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEG 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 5e-13
Identities = 53/213 (24%), Positives = 82/213 (38%), Gaps = 58/213 (27%)
Query: 498 QLANKLGQGGFGPVYKG-KLQDGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHRNLV 554
Q NK+G G FG VY L G+ +AVK R+ + +E +E+ V+ L+H NLV
Sbjct: 3 QRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLV 62
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF--------------------------------- 581
+ G V RE+ + EY +L+
Sbjct: 63 KYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVH 122
Query: 582 -----------------LFDFGLARIFGGNQDQAAT--KRLVGTYGYMSPEYAMEGRFSE 622
L DFG A N + L GT YM+PE G+
Sbjct: 123 RDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKG 182
Query: 623 K---SDVFSFGVLLLEIVSGRKNTSFYHEEFEL 652
+D++S G ++LE+ +G++ S EF++
Sbjct: 183 HGRAADIWSLGCVVLEMATGKRPWSELDNEFQI 215
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 1e-12
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 56/192 (29%)
Query: 503 LGQGGFGPVYKGKLQ--DGQEI--AVKRL-SKASGQGQEEFMNEVMVISNLQHRNLVRLL 557
+G G FG V +G+L+ +EI A+K L + +S + + +F+ E ++ H N++RL
Sbjct: 12 IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLE 71
Query: 558 GCCVEREENMLIYEYMPNKSLDSFL------FDFG-LARIFGG--------------NQD 596
G + M+I EYM N SLD FL F G L + G ++D
Sbjct: 72 GVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRD 131
Query: 597 QAATKRLV---------------------GTYGYMS---------PEYAMEGRFSEKSDV 626
AA LV TY PE +F+ SDV
Sbjct: 132 LAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDV 191
Query: 627 FSFGVLLLEIVS 638
+SFG+++ E++S
Sbjct: 192 WSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 1e-12
Identities = 61/196 (31%), Positives = 88/196 (44%), Gaps = 56/196 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +G+G FG V G + G ++AVK + + A+ Q F+ E V++ L+H NLV
Sbjct: 7 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLV 62
Query: 555 RLLGCCVEREENMLIY-EYMPNKSLDSFLFDFGLARIFGGN------------------- 594
+LLG VE + + I EYM SL +L G + + GG+
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEAN 121
Query: 595 ----QDQAATKRLVGT--------YG-----------------YMSPEYAMEGRFSEKSD 625
+D AA LV +G + +PE E +FS KSD
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 626 VFSFGVLLLEIVS-GR 640
V+SFG+LL EI S GR
Sbjct: 182 VWSFGILLWEIYSFGR 197
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.2 bits (165), Expect = 2e-12
Identities = 50/206 (24%), Positives = 78/206 (37%), Gaps = 60/206 (29%)
Query: 503 LGQGGFGPVYK-GKLQDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLG 558
LG+G FG V K G+ A+K L K + E + E ++S + H +V+L
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLH- 59
Query: 559 CCVEREENM-LIYEYMPNKSLDSFL------------F---------------------- 583
+ EE + L+ EY P L S L F
Sbjct: 60 YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDL 119
Query: 584 ----------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVF 627
DFGLA+ + + T GT Y++PE + + + D +
Sbjct: 120 KPENILLDADGHIKLTDFGLAKELS--SEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWW 177
Query: 628 SFGVLLLEIVSGRKNTSFYHEEFELT 653
S GVLL E+++G+ FY E+ +
Sbjct: 178 SLGVLLYEMLTGK--PPFYAEDRKEI 201
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 3e-12
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKASGQGQEEFMNEVMVISNL 548
+N L +LG+G FG V+ + QD +AVK L AS +++F E +++NL
Sbjct: 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 64
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
QH ++V+ G CVE + ++++EYM + L+ FL
Sbjct: 65 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 98
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 5e-12
Identities = 57/198 (28%), Positives = 78/198 (39%), Gaps = 58/198 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLG G FG V+ G + ++AVK L K + F+ E ++ LQH LV
Sbjct: 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 64
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------FDF---------------- 585
RL + E +I EYM SL FL DF
Sbjct: 65 RLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 124
Query: 586 -----------------------GLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRF 620
GLAR+ +D T R + + +PE G F
Sbjct: 125 IHRDLRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSF 181
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFG+LL EIV+
Sbjct: 182 TIKSDVWSFGILLYEIVT 199
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 5e-12
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 51/187 (27%)
Query: 503 LGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLLGCCV 561
LG+G FG V+KG L+D +AVK + Q + +F++E ++ H N+V+L+G C
Sbjct: 3 LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT 62
Query: 562 EREENMLIYEYMPNKSLDSFL--------------FDF----GLARIFGGN---QDQAAT 600
+R+ ++ E +P SFL F G+A + N +D AA
Sbjct: 63 QRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAAR 122
Query: 601 KRLVGT--------YG---------------------YMSPEYAMEGRFSEKSDVFSFGV 631
LVG +G + +PE GR+S +SDV+S+G+
Sbjct: 123 NCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGI 182
Query: 632 LLLEIVS 638
LL E S
Sbjct: 183 LLWETFS 189
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 5e-12
Identities = 27/87 (31%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
F++ K+G+GGFG VYK + + G+E+A+K + S + +E+ +NE+ ++ +H N+V+
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFL 582
G ++++E ++ E+ SL L
Sbjct: 62 YYGSYLKKDELWIVMEFCSGGSLKDLL 88
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.4 bits (163), Expect = 8e-12
Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 61/202 (30%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEF----MNEVMVISNLQHR 551
++ ++G+G +G VYK + + G+ +A+K++ +E F + E+ ++ L+H
Sbjct: 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRME--NEKEGFPITAIREIKLLQKLRHP 58
Query: 552 NLVRLLGCCVEREEN--MLIYEYMPN------------------KSLDSFLF-------- 583
N+VRL + + +++EYM + K L
Sbjct: 59 NIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHS 118
Query: 584 ------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM-EG 618
DFGLAR + T R++ T Y PE +
Sbjct: 119 NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVI-TLWYRPPELLLGAT 177
Query: 619 RFSEKSDVFSFGVLLLEIVSGR 640
R+ + D++S G +L E+ G+
Sbjct: 178 RYGPEVDMWSVGCILAELFLGK 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 9e-12
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Query: 502 KLGQGGFGPVYKGKL------QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+LG+G FG V+ + QD +AVK L +AS +++F E +++ LQH+++VR
Sbjct: 12 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFLFDFGL-ARIFGGNQDQA 598
G C E ++++EYM + L+ FL G A+I G +D A
Sbjct: 72 FYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVA 115
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 65.5 bits (159), Expect = 1e-11
Identities = 58/200 (29%), Positives = 80/200 (40%), Gaps = 60/200 (30%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV+
Sbjct: 7 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQ 65
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF----------------- 585
L V E ++ EYM SL F L D
Sbjct: 66 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 124
Query: 586 ----------------------GLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRFS 621
GLAR+ +D T R + + +PE A+ GRF+
Sbjct: 125 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 181
Query: 622 EKSDVFSFGVLLLEIVS-GR 640
KSDV+SFG+LL E+ + GR
Sbjct: 182 IKSDVWSFGILLTELTTKGR 201
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 4e-11
Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 53/198 (26%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKR--LSKASGQGQEEFMNEVMVISNLQHRN 552
+F++ KLG+G +G VYK K L D Q A+K L S + +E+ +NE+ +++++ H N
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60
Query: 553 LVR-----LLGC--CVERE---------------------ENMLIYEYMPN--------- 575
++ L G C+ E I+
Sbjct: 61 IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120
Query: 576 ---------KSLDSFLFDFGLARIFGGNQDQAATKRL----VGTYGYMSPEYAMEGRFSE 622
KS + L L +I + K + +GT YM+PE +S
Sbjct: 121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSY 180
Query: 623 KSDVFSFGVLLLEIVSGR 640
KSD++S G LL E+ +
Sbjct: 181 KSDIWSLGCLLYEMATFA 198
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 4e-11
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 59/191 (30%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCV 561
+LG G FG V GK + ++A+K + + S ++EF+ E V+ L H LV+L G C
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCT 69
Query: 562 EREENMLIYEYMPN------------------------------KSLDSFLF-------- 583
++ ++ EYM N L+S F
Sbjct: 70 KQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAAR 129
Query: 584 -------------DFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRFSEKSDVF 627
DFGL+R ++ ++ VG+ + PE + +FS KSDV+
Sbjct: 130 NCLVDDQGCVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLLYSKFSSKSDVW 185
Query: 628 SFGVLLLEIVS 638
+FGVL+ E+ S
Sbjct: 186 AFGVLMWEVYS 196
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 5e-11
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGK---LQDGQE---IAVKRLSK-ASGQGQEEFMNEVMVISN 547
NN + +GQG FG V++ + L + +AVK L + AS Q +F E +++
Sbjct: 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 64
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N+V+LLG C + L++EYM L+ FL
Sbjct: 65 FDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 99
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 9e-11
Identities = 60/216 (27%), Positives = 83/216 (38%), Gaps = 79/216 (36%)
Query: 502 KLGQGGFGPVYKGKLQDGQEI-----------------AVKRLSK-ASGQGQEEFMNEVM 543
KLG+G FG V+ + Q+ AVK L AS +E+F+ EV
Sbjct: 12 KLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVK 71
Query: 544 VISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL-----FDFGL----------- 587
++S L N+ RLLG C +I EYM N L+ FL GL
Sbjct: 72 ILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFST 131
Query: 588 -----ARIFGG----------NQDQAATKRLVGT--------YG-----YMSPEYAMEGR 619
+I G ++D A LVG +G Y S Y ++GR
Sbjct: 132 LLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGR 191
Query: 620 -----------------FSEKSDVFSFGVLLLEIVS 638
F+ KSDV++FGV L EI++
Sbjct: 192 APLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILT 227
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 1e-10
Identities = 54/190 (28%), Positives = 81/190 (42%), Gaps = 52/190 (27%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
L +G+G FG V +G+ GQ++AVK + K Q F+ E V++ L H+NLVRLLG
Sbjct: 10 LGEIIGEGEFGAVLQGEYT-GQKVAVKNI-KCDVTAQA-FLEETAVMTKLHHKNLVRLLG 66
Query: 559 CCVEREENMLIYEYMPNKSLDSFLFDFGLARI-----------FGGNQDQAATKRL---- 603
+ ++ E M +L +FL G A + + +K+L
Sbjct: 67 VILHNGLY-IVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRD 125
Query: 604 ---------------VGTYG-----------------YMSPEYAMEGRFSEKSDVFSFGV 631
V +G + +PE +FS KSDV+S+GV
Sbjct: 126 LAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGV 185
Query: 632 LLLEIVS-GR 640
LL E+ S GR
Sbjct: 186 LLWEVFSYGR 195
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 1e-10
Identities = 56/195 (28%), Positives = 84/195 (43%), Gaps = 59/195 (30%)
Query: 503 LGQGGFGPVYKGK---LQD--GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLL 557
LG+G FG V + LQD G+ +AVK+L ++ + +F E+ ++ +LQH N+V+
Sbjct: 12 LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71
Query: 558 GCCVE--REENMLIYEYMPNKSLDSFL------FDFG-----LARIFGG----------N 594
G C R L+ EY+P SL +L D ++I G +
Sbjct: 72 GVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVH 131
Query: 595 QDQAATKRLV--------GTYG-----------YM------SP------EYAMEGRFSEK 623
+D A LV G +G Y SP E E +FS
Sbjct: 132 RDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVA 191
Query: 624 SDVFSFGVLLLEIVS 638
SDV+SFGV+L E+ +
Sbjct: 192 SDVWSFGVVLYELFT 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFGLA+I G + A T VGT YMSPE + EKSD++S G L+ E+ +
Sbjct: 151 LGDFGLAKILGHDSSFAKT--YVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS 207
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains | Back alignment and domain information |
|---|
Score = 57.2 bits (138), Expect = 2e-10
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 339 QDGFFKLETMKVPYFAE--RSSANEDKCKDQCSN-NCSCKAYAY-EIGVGCMIWTHN-LI 393
D F +L K+P F+ S A+ ++C +C N NCSC+++ Y GC++W+ + L
Sbjct: 3 DDCFVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNNGTKGCLLWSESSLG 62
Query: 394 DIRKLPSGGTNLYIRV 409
D R PSGG +LY ++
Sbjct: 63 DARLFPSGGVDLYEKI 78
|
Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. Length = 78 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 61.8 bits (150), Expect = 2e-10
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L KLG G FG V+ G ++A+K L + S E F+ E ++ LQH LV
Sbjct: 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLV 64
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
RL V +E +I EYM N SL FL
Sbjct: 65 RLYA-VVTQEPIYIITEYMENGSLVDFL 91
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 4e-10
Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 56/193 (29%)
Query: 503 LGQGGFGPVYKG-KLQDGQEIAVKRLSKAS--GQGQE---EFMNEVMVISNLQHRNLVRL 556
LG G FG VY+G L DG AVK +S A GQE + E+ ++S LQH N+V+
Sbjct: 8 LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67
Query: 557 LGCCVEREENMLIY-EYMPNKSLDSFLFDFGLAR-------------------------- 589
LG E E+N+ I+ E +P SL L +G
Sbjct: 68 LGTERE-EDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHR 126
Query: 590 -IFGGN--------------------QDQAATKRLVGTYGYMSPEYAM-EGRFSEKSDVF 627
I G N + + K G+ +M+PE +G + +D++
Sbjct: 127 DIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIW 186
Query: 628 SFGVLLLEIVSGR 640
S G +LE+ +G+
Sbjct: 187 SLGCTVLEMATGK 199
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 5e-10
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 497 FQLANKLGQGGFGPVYKGKL--QDG--QEIAVKRLSKASGQGQ---EEFMNEVMVISNLQ 549
+L LG+G FG V +G+L DG ++AVK + K EEF++E + +
Sbjct: 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTM-KLDIHTYSEIEEFLSEAACMKDFD 59
Query: 550 HRNLVRLLGCCVEREEN------MLIYEYMPNKSLDSFLF 583
H N+++L+G C E M+I +M + L SFL
Sbjct: 60 HPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLL 99
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 7e-10
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 57/193 (29%)
Query: 503 LGQGGFGPVYKGKLQ-DGQE---IAVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G G FG V++G L+ G++ +A+K L + Q ++F++E ++ H N++RL
Sbjct: 13 IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72
Query: 558 GCCVEREENMLIYEYMPNKSLDSFLFD-------FGLARIFGG--------------NQD 596
G + + M+I EYM N +LD +L D + L + G ++D
Sbjct: 73 GVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRD 132
Query: 597 QAATKRLV----------------------GTYG---------YMSPEYAMEGRFSEKSD 625
AA LV GTY + +PE +F+ SD
Sbjct: 133 LAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASD 192
Query: 626 VFSFGVLLLEIVS 638
V+SFG+++ E++S
Sbjct: 193 VWSFGIVMWEVMS 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 9e-10
Identities = 47/204 (23%), Positives = 75/204 (36%), Gaps = 65/204 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRL-SKASGQGQEEFMNEVMVISNLQHRN 552
++ + LGQG G VYK + + G+ A+K++ + +++ + E+ + + +
Sbjct: 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPY 60
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG------LARI---------------- 590
+V+ G + E ++ EYM SL L G LA I
Sbjct: 61 VVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH 120
Query: 591 -----------------------FG------GNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
FG DQ T VGT YMSPE R
Sbjct: 121 IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNT--FVGTVTYMSPE-----RIQ 173
Query: 621 ----SEKSDVFSFGVLLLEIVSGR 640
S +D++S G+ LLE G+
Sbjct: 174 GESYSYAADIWSLGLTLLECALGK 197
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 1e-09
Identities = 58/200 (29%), Positives = 80/200 (40%), Gaps = 60/200 (30%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+ +L KLG G FG V+ ++AVK + K E F+ E V+ LQH LV+
Sbjct: 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVK 65
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSF-------------LFDF----------------- 585
L V +E +I E+M SL F L DF
Sbjct: 66 -LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 124
Query: 586 ----------------------GLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRFS 621
GLAR+ +D T R + + +PE G F+
Sbjct: 125 HRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSFT 181
Query: 622 EKSDVFSFGVLLLEIVS-GR 640
KSDV+SFG+LL+EIV+ GR
Sbjct: 182 IKSDVWSFGILLMEIVTYGR 201
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 39/196 (19%), Positives = 77/196 (39%), Gaps = 56/196 (28%)
Query: 497 FQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
F + KLG+G +G VYK + GQ +A+K + + +E + E+ ++ +V+
Sbjct: 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVP--VEEDLQEIIKEISILKQCDSPYIVK 62
Query: 556 LLGCCVEREENMLIYEY-----------MPNKSLD------------------------- 579
G + + ++ EY + NK+L
Sbjct: 63 YYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIH 122
Query: 580 ---------------SFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
+ L DFG++ + T ++GT +M+PE E ++ K+
Sbjct: 123 RDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT--VIGTPFWMAPEVIQEIGYNNKA 180
Query: 625 DVFSFGVLLLEIVSGR 640
D++S G+ +E+ G+
Sbjct: 181 DIWSLGITAIEMAEGK 196
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.3 bits (142), Expect = 2e-09
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRK 641
DFGL+R ++ + + T + +M+PE +G F+ KSDV+SFGVLL EI + G
Sbjct: 148 DFGLSRDVYDDDYYRKKTGGKLPIR-WMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGAT 206
Query: 642 NTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCV-----NVGLLCVQ 696
Y ++ V++ + G+++ + L C Q
Sbjct: 207 P---YPG-------------LSNEEVLEYL-----RKGYRLPKPEYCPDELYELMLSCWQ 245
Query: 697 EFVKDRPNMPTVVSML 712
+DRP +V L
Sbjct: 246 LDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 53/201 (26%), Positives = 80/201 (39%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKR-----LSKASGQGQEEFMNEVMVISNL 548
N++ LGQG FG VY D G+E+AVK+ S + + E+ ++ NL
Sbjct: 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL 61
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG-----LAR-------------- 589
QH +V+ GC + E + EYMP S+ L +G + R
Sbjct: 62 QHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLH 121
Query: 590 --------IFGGN-----------QDQAATKRL-------------VGTYGYMSPEYAME 617
I G N D A+KRL GT +MSPE
Sbjct: 122 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISG 181
Query: 618 GRFSEKSDVFSFGVLLLEIVS 638
+ K+DV+S G ++E+++
Sbjct: 182 EGYGRKADVWSVGCTVVEMLT 202
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 2e-09
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 502 KLGQGGFGPVYKGKL------QDGQEIAVKRLS-KASGQGQEEFMNEVMVISNLQHRNLV 554
+LG+ FG VYKG L + Q +A+K L KA G +EEF +E M+ S LQH N+V
Sbjct: 12 ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIV 71
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
LLG + + +I+ Y + L FL
Sbjct: 72 CLLGVVTKEQPLSMIFSYCSHSDLHEFL 99
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 49/197 (24%), Positives = 71/197 (36%), Gaps = 63/197 (31%)
Query: 502 KLGQGGFGPVYKGK-LQDGQE---IAVKRLSKASGQG-QEEFMNEVMVISNLQHRNLVRL 556
KLG G FG V +G+ G + +AVK L ++F+ E ++ +L H NL+RL
Sbjct: 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61
Query: 557 LGCCVEREENMLIYEYMPNKSL---------DSFLF------------------------ 583
G V M++ E P SL FL
Sbjct: 62 YG-VVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIH 120
Query: 584 -------------------DFGLARIFGGNQD---QAATKRLVGTYGYMSPEYAMEGRFS 621
DFGL R N+D ++ + + +PE FS
Sbjct: 121 RDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKV--PFAWCAPESLRTRTFS 178
Query: 622 EKSDVFSFGVLLLEIVS 638
SDV+ FGV L E+ +
Sbjct: 179 HASDVWMFGVTLWEMFT 195
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 2e-09
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 52/188 (27%)
Query: 502 KLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+GQG G VY + GQE+A+K+++ +E +NE++V+ +H N+V L
Sbjct: 26 KIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSY 85
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ EY+ SL D+
Sbjct: 86 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 145
Query: 581 FLF---------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGV 631
L DFG Q + +T +VGT +M+PE + K D++S G+
Sbjct: 146 ILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 632 LLLEIVSG 639
+ +E+V G
Sbjct: 204 MAIEMVEG 211
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 2e-09
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE---------------IAVKRL-SKASGQGQEEF 538
+L KLG+G FG V+ + + E +AVK L + + + +F
Sbjct: 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDF 64
Query: 539 MNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ E+ ++S L++ N++RLLG CV + +I EYM N L+ FL
Sbjct: 65 LKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFL 108
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 2e-09
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 51/187 (27%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCV 561
+LG G FG V+ GK + ++A+K +++ + +E+F+ E V+ L H LV+L G C
Sbjct: 11 ELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCT 69
Query: 562 EREENMLIYEYMPNKSLDSFLFD----FG-----------------LARIFGGNQDQAAT 600
+++ ++ E+M N L ++L L R ++D AA
Sbjct: 70 QQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAAR 129
Query: 601 KRLVGTYG-----------------YMS------------PEYAMEGRFSEKSDVFSFGV 631
LV + G Y S PE ++S KSDV+SFGV
Sbjct: 130 NCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGV 189
Query: 632 LLLEIVS 638
L+ E+ +
Sbjct: 190 LMWEVFT 196
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 2e-09
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 60/204 (29%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQEIAVKRLS------KASGQGQEEFMNEVMVISNLQH 550
+ LG+G +G VY G GQ IAVK++ A+ + E+ EV ++ +L+H
Sbjct: 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH 61
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG------------------------ 586
N+V+ LG C++ + E++P S+ S L FG
Sbjct: 62 VNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN 121
Query: 587 --LARIFGGNQ------------DQAATKRLV----------------GTYGYMSPEYAM 616
+ R GN D +RL GT +M+PE
Sbjct: 122 CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVIN 181
Query: 617 EGRFSEKSDVFSFGVLLLEIVSGR 640
E + KSD++S G + E+ +G+
Sbjct: 182 ESGYGRKSDIWSIGCTVFEMATGK 205
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 3e-09
Identities = 59/197 (29%), Positives = 84/197 (42%), Gaps = 54/197 (27%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+ +L KLGQG FG V+ G ++A+K L K E F+ E ++ L+H LV
Sbjct: 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTL-KPGTMMPEAFLQEAQIMKKLRHDKLVP 65
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFLFDF-------------------GLARIFGGN-- 594
L V E ++ E+M SL FL + G+A I N
Sbjct: 66 LYA-VVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYI 124
Query: 595 -QDQAATKRLVGT--------YG---------------------YMSPEYAMEGRFSEKS 624
+D A LVG +G + +PE A+ GRF+ KS
Sbjct: 125 HRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 184
Query: 625 DVFSFGVLLLEIVS-GR 640
DV+SFG+LL E+V+ GR
Sbjct: 185 DVWSFGILLTELVTKGR 201
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|221289 pfam11883, DUF3403, Domain of unknown function (DUF3403) | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 4e-09
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 714 SEIKDLPAAKQPAFTVRRGAYDS-ASSSNQNQQICSINDVTVTLMEGR 760
SE ++P KQP F V R Y++ +SSS Q + ++N VTV++++ R
Sbjct: 1 SETTEIPQPKQPGFCVGRSPYETDSSSSTQRDESWTVNQVTVSVIDAR 48
|
This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is about 50 amino acids in length. This domain is found associated with pfam00069, pfam08276, pfam00954, pfam01453. Length = 48 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 4e-09
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 499 LANKLGQGGFGPVYKGK------LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN 552
L +LG+G FG V+ + +D +AVK L + +++F E +++NLQH +
Sbjct: 9 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 68
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+V+ G C + + ++++EYM + L+ FL
Sbjct: 69 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 98
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 4e-09
Identities = 53/194 (27%), Positives = 77/194 (39%), Gaps = 58/194 (29%)
Query: 503 LGQGGFGPV----YKGKLQD-GQEIAVKRLSKASGQGQEE-FMNEVMVISNLQHRNLVRL 556
LG+G FG V Y G+ +AVK L + GQ + E+ ++ L H N+V+
Sbjct: 12 LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKY 71
Query: 557 LGCCVEREEN--MLIYEYMPNKSLDSFL--FDFGLARIFGGNQ----------------- 595
GCC E+ LI EY+P SL +L LA++ Q
Sbjct: 72 KGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHR 131
Query: 596 DQAATKRLV--------GTYG-----------------------YMSPEYAMEGRFSEKS 624
D AA L+ G +G + + E E +FS S
Sbjct: 132 DLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYAS 191
Query: 625 DVFSFGVLLLEIVS 638
DV+SFGV L E+++
Sbjct: 192 DVWSFGVTLYELLT 205
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 58.2 bits (140), Expect = 4e-09
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 58/193 (30%)
Query: 503 LGQGGFGPVYKGK-LQDGQEI----AVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRL 556
LG G FG VYKG + +G+ + A+K L++ +G + EFM+E ++++++ H +LVRL
Sbjct: 15 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFLF--------------------------------- 583
LG C+ L+ + MP+ L ++
Sbjct: 75 LGVCLS-PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 133
Query: 584 ------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSD 625
DFGLAR+ G++ + +M+ E +F+ +SD
Sbjct: 134 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD 193
Query: 626 VFSFGVLLLEIVS 638
V+S+GV + E+++
Sbjct: 194 VWSYGVTIWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 6e-09
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 65/198 (32%)
Query: 503 LGQGGFGPVYKGKL--QDGQEI--AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G+G FG VY G L DGQ+I AVK L++ + + E+F+ E +++ + H N++ LL
Sbjct: 3 IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62
Query: 558 GCCVEREEN-MLIYEYMPN----------------KSLDSF------------------- 581
G C+ E + +++ YM + K L F
Sbjct: 63 GICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHR 122
Query: 582 ----------------LFDFGLAR-IFGGN----QDQAATKRLVGTYGYMSPEYAMEGRF 620
+ DFGLAR I+ + K V +M+ E +F
Sbjct: 123 DLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVK---WMALESLQTQKF 179
Query: 621 SEKSDVFSFGVLLLEIVS 638
+ KSDV+SFGVLL E+++
Sbjct: 180 TTKSDVWSFGVLLWELMT 197
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 6e-09
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 62/215 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLS---KASGQGQEEFMNEVMVISNLQHR 551
NFQ+ K+G+G F VY+ L D + +A+K++ + +++ + E+ ++ L H
Sbjct: 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62
Query: 552 NLVRLLGCCVEREE--------------NMLIY-----EYMPNKSLDSF----------- 581
N+++ L +E E M+ Y +P +++ +
Sbjct: 63 NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM 122
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
L D GL R F + A LVGT YMSPE E
Sbjct: 123 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYYMSPERIHE 180
Query: 618 GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFEL 652
++ KSD++S G LL E+ + + FY ++ L
Sbjct: 181 NGYNFKSDIWSLGCLLYEMAA--LQSPFYGDKMNL 213
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 6e-09
Identities = 54/207 (26%), Positives = 78/207 (37%), Gaps = 66/207 (31%)
Query: 495 NNFQLANKLGQGGFGPVYK------GKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISN 547
NN LG G FG V + K ++AVK L A +E M+E+ ++S+
Sbjct: 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSH 94
Query: 548 L-QHRNLVRLLGCCVEREENMLIYE---------YMPNKSLDSFLF-------------- 583
L H N+V LLG C ++I E ++ K +SFL
Sbjct: 95 LGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKG 153
Query: 584 ------------------------------DFGLAR--IFGGNQDQAATKRLVGTYGYMS 611
DFGLAR + N RL +M+
Sbjct: 154 MAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARL--PVKWMA 211
Query: 612 PEYAMEGRFSEKSDVFSFGVLLLEIVS 638
PE ++ +SDV+S+G+LL EI S
Sbjct: 212 PESIFNCVYTFESDVWSYGILLWEIFS 238
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 7e-09
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 60/197 (30%)
Query: 499 LANKLGQGGFGPVYKG--KLQDGQEI--AVKRLSK-ASGQGQEEFMNEVMVISNLQHRNL 553
L +G+G FG VY+G + ++I AVK S +E+F+ E ++ H ++
Sbjct: 10 LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHI 69
Query: 554 VRLLGCCVE---------------RE-----------ENMLIYEYMPNKSLDSF------ 581
V+L+G E R ++++Y Y + +L
Sbjct: 70 VKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFV 129
Query: 582 ------------------LFDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRFS 621
L DFGL+R +D++ K G +M+PE RF+
Sbjct: 130 HRDIAARNVLVSSPDCVKLGDFGLSRYL---EDESYYKASKGKLPIKWMAPESINFRRFT 186
Query: 622 EKSDVFSFGVLLLEIVS 638
SDV+ FGV + EI+
Sbjct: 187 SASDVWMFGVCMWEILM 203
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 7e-09
Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 55/193 (28%)
Query: 503 LGQGGFGPVYKGKLQDGQ-EIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCV 561
LG+G +G VY + Q IA+K + + + + E+ + S L+HRN+V+ LG
Sbjct: 16 LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75
Query: 562 EREENMLIYEYMPNKSLDSFL-------FDFGLARIFGGNQ------------------- 595
E + E +P SL + L D IF Q
Sbjct: 76 ENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIK 135
Query: 596 ----------------DQAATKRLV----------GTYGYMSPEYAMEGR--FSEKSDVF 627
D +KRL GT YM+PE +G + +D++
Sbjct: 136 GDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIW 195
Query: 628 SFGVLLLEIVSGR 640
S G ++E+ +G+
Sbjct: 196 SLGCTIVEMATGK 208
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 9e-09
Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 51/263 (19%)
Query: 501 NKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGC 559
N + +G G YKGK +++G + VK ++ + E + + LQH N+V+L+G
Sbjct: 696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIAD----MGKLQHPNIVKLIGL 751
Query: 560 CVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTY-------GYMSP 612
C + LI+EY+ K+L L + R A R + G +SP
Sbjct: 752 CRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSP 811
Query: 613 E--------------------------------YAMEGR----FSEKSDVFSFGVLLLEI 636
E A E R +EKSD++ FG++L+E+
Sbjct: 812 EKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIEL 871
Query: 637 VSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE--SGFKMEIIRCVNVGLLC 694
++G K+ + +++ +A ++D ++ +DP I S + EI+ +N+ L C
Sbjct: 872 LTG-KSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHC 930
Query: 695 VQEFVKDRPNMPTVVSMLNSEIK 717
RP V+ L S +
Sbjct: 931 TATDPTARPCANDVLKTLESASR 953
|
Length = 968 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 9e-09
Identities = 61/275 (22%), Positives = 108/275 (39%), Gaps = 75/275 (27%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLS---KASGQGQEEFMNEVMVISNLQHR 551
NF++ K+G+G F VY+ L DG +A+K++ + + + + E+ ++ L H
Sbjct: 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62
Query: 552 NLVRLLGCCVEREENMLIYEY-------------------MPNKSLDSF----------- 581
N+++ +E E ++ E +P K++ +
Sbjct: 63 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM 122
Query: 582 ------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
L D GL R F + A LVGT YMSPE E
Sbjct: 123 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYYMSPERIHE 180
Query: 618 GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD-PLIS 676
++ KSD++S G LL E+ + + FY ++ L L I+ D P +
Sbjct: 181 NGYNFKSDIWSLGCLLYEMAA--LQSPFYGDKMNLYSLC---------KKIEQCDYPPLP 229
Query: 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711
+ E+ + VN +C+ + RP++ V +
Sbjct: 230 SDHYSEELRQLVN---MCINPDPEKRPDITYVYDV 261
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 2e-08
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 503 LGQGGFGPVYKGKLQD----GQ----EIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
LGQG F ++KG ++ G+ E+ +K L K+ E F ++S L H++LV
Sbjct: 3 LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
G CV +E++++ EY+ SLD++L
Sbjct: 63 LNYGVCVCGDESIMVQEYVKFGSLDTYL 90
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 56.0 bits (136), Expect = 2e-08
Identities = 44/220 (20%), Positives = 79/220 (35%), Gaps = 75/220 (34%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNL-Q 549
++F+ +G+G F V K + +E A+K L K + + E V++ L
Sbjct: 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60
Query: 550 HRNLVRLLGCCVEREENM-LIYEYMPN----------KSLD------------------- 579
H +++L + EEN+ + EY PN SLD
Sbjct: 61 HPGIIKLY-YTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLH 119
Query: 580 ------------SFLFD---------FGLARIFGGNQ------------------DQAAT 600
+ L D FG A++ N ++
Sbjct: 120 SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRF 179
Query: 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
VGT Y+SPE E + SD+++ G ++ ++++G+
Sbjct: 180 ASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK 219
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 43/198 (21%), Positives = 75/198 (37%), Gaps = 56/198 (28%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMN--EVMVISNLQHRNL 553
+Q K+G+G +G VYK + G+ +A+K++ E+ ++ L H N+
Sbjct: 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI 60
Query: 554 VRLLGCCVEREENMLIYEYM---------------PNKSLDSFLF--------------- 583
++LL + + L++E+M P + S+L+
Sbjct: 61 IKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL 120
Query: 584 --------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF-SE 622
DFGLAR FG V T Y +PE + + S
Sbjct: 121 HRDLKPENLLINTEGVLKLADFGLARSFGS--PVRPYTHYVVTRWYRAPELLLGDKGYST 178
Query: 623 KSDVFSFGVLLLEIVSGR 640
D++S G + E++S R
Sbjct: 179 PVDIWSVGCIFAELLSRR 196
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 56.7 bits (135), Expect = 2e-08
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQH-R 551
++++ KLG+G FG VY + D + +A+K L+K + E F+ E+ ++++L H
Sbjct: 1 SYRILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
N+V+L + L+ EY+ SL+ L
Sbjct: 59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLL 89
|
Length = 384 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 2e-08
Identities = 49/205 (23%), Positives = 79/205 (38%), Gaps = 57/205 (27%)
Query: 489 ELANATNNFQLANKLGQGGFGPVYKG--KLQDGQE--IAVKRL-SKASGQGQEEFMNEVM 543
EL N + ++ LG G FG + +G KL +E +A+ L + S + + F+ E +
Sbjct: 1 ELDNKS--IKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEAL 58
Query: 544 VISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLF----DFGLARIFGGNQDQAA 599
+ H N+VRL G M++ EYM N +LDSFL ++ G A+
Sbjct: 59 TLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLAS 118
Query: 600 TKRLVGTYGYMS------------------------PEYAME------------------ 617
+ + GY+ E E
Sbjct: 119 GMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPE 178
Query: 618 ----GRFSEKSDVFSFGVLLLEIVS 638
FS SDV+SFG+++ E++S
Sbjct: 179 AIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 18/99 (18%)
Query: 502 KLGQGGFGPVYKGKLQDGQE-----------------IAVKRL-SKASGQGQEEFMNEVM 543
KLG+G FG V+ ++ + Q+ +AVK L A+ + +F+ EV
Sbjct: 12 KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVK 71
Query: 544 VISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++S L+ N++RLLG CV+ + +I EYM N L+ FL
Sbjct: 72 ILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFL 110
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 3e-08
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 53/190 (27%)
Query: 502 KLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGC 559
++G+G FG V+ G+L+ D +AVK + + +F+ E ++ H N+VRL+G
Sbjct: 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 61
Query: 560 CVEREENMLIYEYMPNKSLDSFLFDFG-------LARIFGG--------------NQDQA 598
C +++ ++ E + +FL G L ++ ++D A
Sbjct: 62 CTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLA 121
Query: 599 ATKRLV-------------------GTYG-----------YMSPEYAMEGRFSEKSDVFS 628
A LV G Y + +PE GR+S +SDV+S
Sbjct: 122 ARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWS 181
Query: 629 FGVLLLEIVS 638
FG+LL E S
Sbjct: 182 FGILLWEAFS 191
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 4e-08
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 503 LGQGGFGPVYKGKL-QDGQE---IAVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRLL 557
+G G FG V +G+L G+ +A+K L + Q +F++E ++ H N++ L
Sbjct: 12 IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71
Query: 558 GCCVEREENMLIYEYMPNKSLDSFL 582
G + M+I E+M N +LDSFL
Sbjct: 72 GVVTKSRPVMIITEFMENGALDSFL 96
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 55.1 bits (132), Expect = 5e-08
Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 52/188 (27%)
Query: 502 KLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+GQG G V+ + GQE+A+K+++ +E +NE++V+ L++ N+V L
Sbjct: 26 KIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSF 85
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ EY+ SL D+
Sbjct: 86 LVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDN 145
Query: 581 FLF---------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGV 631
L DFG Q + +T +VGT +M+PE + K D++S G+
Sbjct: 146 VLLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 632 LLLEIVSG 639
+ +E+V G
Sbjct: 204 MAIEMVEG 211
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 5e-08
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQE------IAVKRLSKASGQG-QEEFMNEVMVISNL 548
N Q LG+G FG V+ K + +E + VK L K + Q EF E+ + L
Sbjct: 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H+N+VRLLG C E E + +I EY L FL
Sbjct: 66 SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFL 99
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 6e-08
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 59/195 (30%)
Query: 503 LGQGGFGP--VYKGKLQDGQEIAVKR--LSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
LG+G FG +Y+ + +D + K L++ S + + + +NE++++S LQH N++
Sbjct: 8 LGKGAFGEATLYR-RTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYN 66
Query: 559 CCVEREENMLIYEYMPN------------------------------------------- 575
++ ++ EY
Sbjct: 67 HFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRD 126
Query: 576 -KSLDSFLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDV 626
K+L+ FL DFG+++I G A T +VGT YMSPE +++ KSD+
Sbjct: 127 IKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET--VVGTPYYMSPELCQGVKYNFKSDI 184
Query: 627 FSFGVLLLEIVSGRK 641
++ G +L E+++ ++
Sbjct: 185 WALGCVLYELLTLKR 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 7e-08
Identities = 43/194 (22%), Positives = 70/194 (36%), Gaps = 59/194 (30%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRL-- 556
LG+GGFG V +++ G+ A K+L K +G++ +NE ++ + R +V L
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60
Query: 557 --------------------------LGCCVEREENMLIY--------EYMPNKS----- 577
+G E + Y E++ +
Sbjct: 61 AFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRD 120
Query: 578 -------LDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDV 626
LD + D GLA + K GT GYM+PE + D
Sbjct: 121 LKPENVLLDDHGNVRISDLGLAVEL---KGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDW 177
Query: 627 FSFGVLLLEIVSGR 640
F+ G L E+++GR
Sbjct: 178 FALGCTLYEMIAGR 191
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 1e-07
Identities = 67/276 (24%), Positives = 111/276 (40%), Gaps = 82/276 (29%)
Query: 503 LGQGGFGPVYKG--KLQDGQEI--AVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLL 557
+G G FG V G KL +EI A+K L + Q +F++E ++ H N++ L
Sbjct: 12 IGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71
Query: 558 GCCVEREENMLIYEYMPNKSLDSFLFD----------FGLAR-IFGG----------NQD 596
G + + M++ EYM N SLD+FL G+ R I G ++D
Sbjct: 72 GVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRD 131
Query: 597 QAATKRLVGT--------YG-----------------------YMSPEYAMEGRFSEKSD 625
AA LV + +G + +PE +F+ SD
Sbjct: 132 LAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASD 191
Query: 626 VFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685
V+S+G+++ E++S Y E W++ N +VI + E G+++
Sbjct: 192 VWSYGIVMWEVMS-------YGER-------PYWEMSN-QDVIKAI-----EEGYRLPAP 231
Query: 686 RCVNVGLL-----CVQEFVKDRPNMPTVVSMLNSEI 716
L C Q+ +RP +VS+L+ I
Sbjct: 232 MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKLI 267
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 1e-07
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 18/99 (18%)
Query: 502 KLGQGGFGPVYKGKLQDGQE-----------------IAVKRL-SKASGQGQEEFMNEVM 543
KLG+G FG V+ + + ++ +AVK L A+ + +F+ E+
Sbjct: 12 KLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIK 71
Query: 544 VISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++S L+ N++RLL C+ + +I EYM N L+ FL
Sbjct: 72 IMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFL 110
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 1e-07
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 64/198 (32%)
Query: 502 KLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE-----FMNEVMVISNLQHRNLVR 555
K+G+G +G VYKG+ + GQ +A+K++ S +EE + E+ ++ LQH N+V
Sbjct: 7 KIGEGTYGVVYKGRNKKTGQIVAMKKIRLES---EEEGVPSTAIREISLLKELQHPNIVC 63
Query: 556 LLGCCVEREENMLIYE-----------------YMPNKSLDSFLF--------------- 583
L ++ LI+E YM + + S+L+
Sbjct: 64 LQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVL 123
Query: 584 --------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG-RFSE 622
DFGLAR F G + T +V T Y +PE + R+S
Sbjct: 124 HRDLKPQNLLIDNKGVIKLADFGLARAF-GIPVRVYTHEVV-TLWYRAPEVLLGSPRYST 181
Query: 623 KSDVFSFGVLLLEIVSGR 640
D++S G + E+ + +
Sbjct: 182 PVDIWSIGTIFAEMATKK 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 53.6 bits (128), Expect = 2e-07
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 52/188 (27%)
Query: 502 KLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+GQG G VY + GQE+A+K+++ +E +NE++V+ ++ N+V L
Sbjct: 26 KIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 85
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ EY+ SL D+
Sbjct: 86 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDN 145
Query: 581 FLF---------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGV 631
L DFG Q + +T +VGT +M+PE + K D++S G+
Sbjct: 146 ILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 632 LLLEIVSG 639
+ +E+V G
Sbjct: 204 MAIEMVEG 211
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 43/204 (21%), Positives = 74/204 (36%), Gaps = 57/204 (27%)
Query: 497 FQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHRNLV 554
F L +G+G FG VYK + Q +A+K + + + E + E+ +S + +
Sbjct: 3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT 62
Query: 555 RLLGCCVEREENMLIYEYMPNKSL------------------------------------ 578
+ G ++ + +I EY S
Sbjct: 63 KYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHR 122
Query: 579 -------------DSFLFDFGLARIFGGNQDQAATKR--LVGTYGYMSPEYAMEGRFSEK 623
D L DFG++ G +KR VGT +M+PE + + EK
Sbjct: 123 DIKAANILLSEEGDVKLADFGVS----GQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEK 178
Query: 624 SDVFSFGVLLLEIVSGRKNTSFYH 647
+D++S G+ +E+ G S H
Sbjct: 179 ADIWSLGITAIELAKGEPPLSDLH 202
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 54/189 (28%)
Query: 502 KLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+G+G G V + + G+++AVK + Q +E NEV+++ + QH+N+V +
Sbjct: 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY 87
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ EE ++ E++ +L DS
Sbjct: 88 LVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDS 147
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A+I ++D K LVGT +M+PE + + D++S G
Sbjct: 148 ILLTLDGRVKLSDFGFCAQI---SKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLG 204
Query: 631 VLLLEIVSG 639
++++E+V G
Sbjct: 205 IMVIEMVDG 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 3e-07
Identities = 55/262 (20%), Positives = 92/262 (35%), Gaps = 78/262 (29%)
Query: 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLG 558
+LG G G V K + G+ +AVK + Q++ + E+ ++ +V G
Sbjct: 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYG 66
Query: 559 CCVEREENMLIYEYMPNKSLDSFLF-------DFGLARI--------------------- 590
+ + EYM SLD L + L +I
Sbjct: 67 AFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRD 126
Query: 591 ------------------FG--GNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
FG G + K VGT YM+PE +S KSD++S G
Sbjct: 127 VKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLG 186
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND--NNVIDLVD-------PLISESGFK 681
+ L+E+ +GR + + ND + + +L+ P + F
Sbjct: 187 LSLIELATGR----------------FPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFS 230
Query: 682 MEIIRCVNVGLLCVQEFVKDRP 703
+ VN LC+ + ++RP
Sbjct: 231 PDFQDFVN---LCLIKDPRERP 249
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 3e-07
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 64/202 (31%)
Query: 503 LGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEE---------FMNEVMVISNLQHRN 552
+G G FG VY G G+ +AVK++ S + E+ ++ LQH N
Sbjct: 8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG-----LARIF---------------- 591
+V+ LG ++ + + EY+P S+ + L ++G L R F
Sbjct: 68 IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGI 127
Query: 592 ------GGN-----------QDQAATKR----------------LVGTYGYMSPEYAMEG 618
G N D +K+ L G+ +M+PE +
Sbjct: 128 IHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT 187
Query: 619 RFSEKSDVFSFGVLLLEIVSGR 640
++ K+D++S G L++E+++G+
Sbjct: 188 SYTRKADIWSLGCLVVEMLTGK 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 54/190 (28%)
Query: 501 NKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGC 559
K+G+G G V G+++AVK++ Q +E NEV+++ + QH N+V +
Sbjct: 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSS 84
Query: 560 CVEREENMLIYEYMPNKSL----------------------------------------D 579
+ +E ++ E++ +L D
Sbjct: 85 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSD 144
Query: 580 SFLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSF 629
S L DFG A++ +++ K LVGT +M+PE + + D++S
Sbjct: 145 SILLTSDGRVKLSDFGFCAQV---SKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSL 201
Query: 630 GVLLLEIVSG 639
G++++E+V G
Sbjct: 202 GIMVIEMVDG 211
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 3e-07
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 495 NNFQLANKLGQGGFGPVYK------GKLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISN 547
+N Q LG G FG V + GK + +AVK L + A +E M+E+ ++S+
Sbjct: 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSH 97
Query: 548 L-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
L QH+N+V LLG C ++I EY L +FL
Sbjct: 98 LGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFL 133
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 3e-07
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL-QDG--QEIAVKRLSK-ASGQGQEEFMNEVMVISNL-Q 549
N+ + + +G+G FG V K ++ +DG + A+KR+ + AS +F E+ V+ L
Sbjct: 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 66
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++ LLG C R L EY P+ +L FL
Sbjct: 67 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 99
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 4e-07
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 57/200 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNL 553
NF+ KLG+G + VYKG+ + EI A+K + + +G + E+ ++ L+H N+
Sbjct: 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI 60
Query: 554 VRLLGCCVEREENMLIYEYMPN---KSLD--------------SFLF------------- 583
VRL + ML++EYM K +D SF +
Sbjct: 61 VRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR 120
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-F 620
DFGLAR FG + + + V T Y +P+ + R +
Sbjct: 121 VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNE--VVTLWYRAPDVLLGSRTY 178
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
S D++S G ++ E+++GR
Sbjct: 179 STSIDIWSVGCIMAEMITGR 198
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 4e-07
Identities = 45/208 (21%), Positives = 78/208 (37%), Gaps = 63/208 (30%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
N + +++ +LG G FG VYK + + G A K + S + E+FM E+ ++S +H
Sbjct: 2 NPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKH 61
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSF----------------------------- 581
N+V L + ++ E+ +LDS
Sbjct: 62 PNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHS 121
Query: 582 ----------------------LFDFGLARIFGGNQDQAATKR--LVGTYGYMSPEYAME 617
L DFG++ + Q KR +GT +M+PE
Sbjct: 122 HKVIHRDLKAGNILLTLDGDVKLADFGVSAK-NKSTLQ---KRDTFIGTPYWMAPEVVAC 177
Query: 618 GRFSE-----KSDVFSFGVLLLEIVSGR 640
F + K+D++S G+ L+E+
Sbjct: 178 ETFKDNPYDYKADIWSLGITLIELAQME 205
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 4e-07
Identities = 47/192 (24%), Positives = 73/192 (38%), Gaps = 57/192 (29%)
Query: 503 LGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRL-- 556
LG GGFG V K++ + A+K + K QE +E ++ H +V+L
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60
Query: 557 ---------------LGC---CVEREEN--------------MLIYEYMPNKS------- 577
LG + R+ +L +EY+ N+
Sbjct: 61 TFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120
Query: 578 -----LDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFS 628
LDS L DFG A+ Q T GT Y++PE + + D +S
Sbjct: 121 PENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWS 177
Query: 629 FGVLLLEIVSGR 640
G+LL E+++GR
Sbjct: 178 LGILLYELLTGR 189
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 5e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQGQE-EFMNEVMVISN 547
L +LGQG FG VY+G K + +A+K +++ + + EF+NE V+
Sbjct: 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKE 65
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++VRLLG + +++ E M L S+L
Sbjct: 66 FNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYL 100
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 5e-07
Identities = 44/205 (21%), Positives = 72/205 (35%), Gaps = 60/205 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE-IAVKR--LSKASGQGQEEFMNEVMVISNLQHR 551
++++L +G G VY E +A+KR L K +E EV +S H
Sbjct: 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEK-CQTSVDELRKEVQAMSQCNHP 59
Query: 552 NLVRLLGCCVEREENMLIYEYM-------------PNKSLDSF----------------- 581
N+V+ V +E L+ Y+ P LD
Sbjct: 60 NVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH 119
Query: 582 -----------------------LFDFGL-ARIFGGNQDQA-ATKRLVGTYGYMSPEYAM 616
+ DFG+ A + G K VGT +M+PE
Sbjct: 120 SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVME 179
Query: 617 EGR-FSEKSDVFSFGVLLLEIVSGR 640
+ + K+D++SFG+ +E+ +G
Sbjct: 180 QVHGYDFKADIWSFGITAIELATGA 204
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 5e-07
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 501 NKLGQGGFGPVYKGKLQDGQEIA---VKRL-SKASGQGQEEFMNEVMVISNLQHRNLVRL 556
+++G G FG V G+ G A VK L + A+ Q F+ EV L H N+++
Sbjct: 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQC 60
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFL 582
LG C+E +L+ E+ P L ++L
Sbjct: 61 LGQCIESIPYLLVLEFCPLGDLKNYL 86
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 6e-07
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 496 NFQLANKLGQGGFGPVYKGK------LQDGQEIAVKRLSKASGQGQ-EEFMNEVMVISNL 548
N L LG+G FG V K +AVK L + + + + ++E ++ +
Sbjct: 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV 60
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H ++++L G C + +LI EY SL SFL
Sbjct: 61 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFL 94
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 6e-07
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 55/199 (27%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKR--LSKASGQGQEEFMNEVMVISNLQHRN 552
+++ ++G+G G V+K K + G+ +A+K+ L + G + + E+ + QH
Sbjct: 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY 60
Query: 553 LVRL--------------------LGCCVEREEN------------MLI--YEYM----- 573
+V+L L + EE ML+ YM
Sbjct: 61 VVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI 120
Query: 574 ------PNKSLDSF-----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-FS 621
P L S + DFGLAR+F + + + + V T Y +PE R +
Sbjct: 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQ-VATRWYRAPELLYGARKYD 179
Query: 622 EKSDVFSFGVLLLEIVSGR 640
D+++ G + E+++G
Sbjct: 180 PGVDLWAVGCIFAELLNGS 198
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 7e-07
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFGL+ D A +VGT +M+PE + K+D++S G+ +E+ G+
Sbjct: 139 LIDFGLSAQL---SDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK 194
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 7e-07
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 57/200 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHRN 552
NFQ K+G+G +G VYK + G+ +A+K RL + + E+ ++ L H N
Sbjct: 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60
Query: 553 LVRLLGCCVEREENMLIYEYM----------------PNKSLDSFLF------------- 583
+V+LL + L++E++ P + S+LF
Sbjct: 61 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF- 620
DFGLAR FG + T +V T Y +PE + ++
Sbjct: 121 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLGCKYY 178
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
S D++S G + E+V+ R
Sbjct: 179 STAVDIWSLGCIFAEMVTRR 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 8e-07
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 15/92 (16%)
Query: 503 LGQGGFGPVYKGKLQD---------GQEIAVKRLSKASGQGQ---EEFMNEVMVISNLQH 550
LGQG F +YKG L+ GQE++V K G F ++S L H
Sbjct: 3 LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVL--KVLGSDHRDSLAFFETASLMSQLSH 60
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++LV+L G CV R+EN+++ EY+ LD FL
Sbjct: 61 KHLVKLYGVCV-RDENIMVEEYVKFGPLDVFL 91
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 51.3 bits (122), Expect = 8e-07
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 54/189 (28%)
Query: 502 KLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+GQG G VY + GQE+A+++++ +E +NE++V+ ++ N+V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ EY+ SL D+
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A+I +Q+ +VGT +M+PE + K D++S G
Sbjct: 147 ILLGMDGSVKLTDFGFCAQI---TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203
Query: 631 VLLLEIVSG 639
++ +E++ G
Sbjct: 204 IMAIEMIEG 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 8e-07
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 60/198 (30%)
Query: 502 KLGQGGFGPVYKG--KLQDGQ-EIAVKRLSKASGQG-QEEFMNEVMVISNLQHRNLVRLL 557
+LG G FG V KG K++ Q ++A+K L + + ++E M E ++ L + +VR++
Sbjct: 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMI 61
Query: 558 GCCVEREENMLIYEYMPNKSLDSF------------------------------------ 581
G C E E ML+ E L+ F
Sbjct: 62 GVC-EAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRD 120
Query: 582 ---------------LFDFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRFSEKS 624
+ DFGL++ G + D R G + + +PE +FS +S
Sbjct: 121 LAARNVLLVNQHYAKISDFGLSKALGAD-DSYYKARSAGKWPLKWYAPECINFRKFSSRS 179
Query: 625 DVFSFGVLLLEIVS-GRK 641
DV+S+G+ + E S G+K
Sbjct: 180 DVWSYGITMWEAFSYGQK 197
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 9e-07
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 502 KLGQGGFGPVYKGKL-----QDGQEIAVKRLSK-ASGQGQEEFMNEVMVISNLQHRNLVR 555
+LG+ FG +YKG L Q +A+K L + Q EF E +++ L H N+V
Sbjct: 12 ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFL 582
LLG + + +++EY+ L FL
Sbjct: 72 LLGVVTQEQPVCMLFEYLNQGDLHEFL 98
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 566 NMLIYEYMPNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
N L+ E + K + DFGL+R I+ + + +K L+ +M PE + G+F+ +S
Sbjct: 154 NCLVGEGLTVK-----ISDFGLSRDIYSADYYRVQSKSLLPVR-WMPPEAILYGKFTTES 207
Query: 625 DVFSFGVLLLEIVS 638
D++SFGV+L EI S
Sbjct: 208 DIWSFGVVLWEIFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 1e-06
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+ R I+ + + K L+ +M+PE +G F+ KSDV+SFGV+L E+ +
Sbjct: 162 DFGMTRDIYETDYYRKGGKGLLPVR-WMAPESLKDGVFTTKSDVWSFGVVLWEMAT 216
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 1e-06
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 502 KLGQGGFGPVYKGKLQDG---QEIAVKRL-SKASGQGQEEFMNEVMVISNLQHRNLVRLL 557
++G G FG V G++ G ++ VK L AS Q Q +F+ E +LQH NL++ L
Sbjct: 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCL 61
Query: 558 GCCVEREENMLIYEYMPNKSLDSFL 582
G C E +L+ E+ P L +L
Sbjct: 62 GQCTEVTPYLLVMEFCPLGDLKGYL 86
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 1e-06
Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 62/197 (31%)
Query: 503 LGQGGFGPVYKGKL-----QDGQEIAVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLVRL 556
LG+G FG V + G+++AVK L SG + E+ ++ NL H N+V+
Sbjct: 12 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71
Query: 557 LGCCVEREEN--MLIYEYMPNKSLDSFL----------------------FDFGLARIFG 592
G C E N LI E++P+ SL +L D+ +R +
Sbjct: 72 KGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQY- 130
Query: 593 GNQDQAATKRLV--------GTYG-----------------------YMSPEYAMEGRFS 621
++D AA LV G +G + +PE ++ +F
Sbjct: 131 VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFY 190
Query: 622 EKSDVFSFGVLLLEIVS 638
SDV+SFGV L E+++
Sbjct: 191 IASDVWSFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 2e-06
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 7/91 (7%)
Query: 499 LANKLGQGGFGPVYKGKLQD---GQ---EIAVKRLSK-ASGQGQEEFMNEVMVISNLQHR 551
L +LGQG FG VY+G +D G+ +AVK +++ AS + + EF+NE V+
Sbjct: 10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 69
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++VRLLG + + +++ E M + L S+L
Sbjct: 70 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 100
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 50.1 bits (119), Expect = 2e-06
Identities = 52/204 (25%), Positives = 81/204 (39%), Gaps = 59/204 (28%)
Query: 496 NFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRL-----SKASGQGQEEFMNEVMVISNLQ 549
N++ LGQG FG VY + G+E+A K++ S + + E+ ++ NLQ
Sbjct: 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ 62
Query: 550 HRNLVRLLGCCVEREENML--IYEYMPNKSLDSFLFDFG--------------------- 586
H +V+ GC +R E L EYMP S+ L +G
Sbjct: 63 HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYL 122
Query: 587 --------------LARIFGGN---QDQAATKRL-------------VGTYGYMSPEYAM 616
+ R GN D A+KRL GT +MSPE
Sbjct: 123 HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVIS 182
Query: 617 EGRFSEKSDVFSFGVLLLEIVSGR 640
+ K+DV+S G ++E+++ +
Sbjct: 183 GEGYGRKADVWSLGCTVVEMLTEK 206
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 2e-06
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 493 ATNNFQLANKLGQGGFGPVY----KGKLQDGQE--IAVKRLSK-ASGQGQEEFMNEVMVI 545
A ++ +LGQG FG VY KG ++D E +A+K +++ AS + + EF+NE V+
Sbjct: 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 63
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++VRLLG + + ++I E M L S+L
Sbjct: 64 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 100
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 52/240 (21%), Positives = 91/240 (37%), Gaps = 66/240 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKAS--GQGQEE-FMNEVMVISNLQH 550
++F+ LG G FG V + + + A+K LSKA Q E +NE ++ +++H
Sbjct: 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH 60
Query: 551 RNLVRLLG----------------------------------CCVEREENMLIYEYMPNK 576
LV L G + +L EY+ +
Sbjct: 61 PFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL 120
Query: 577 S------------LDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
LDS + DFG A+ G T L GT Y++PE + +
Sbjct: 121 DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGY 175
Query: 621 SEKSDVFSFGVLLLEIVSGRKNTSFYHEE----FELTLLG-YAWKLWNDNNVIDLVDPLI 675
+ D ++ G+L+ E+++G F+ + +E L G + + + DL+ L+
Sbjct: 176 GKAVDWWALGILIYEMLAGY--PPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLL 233
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 3e-06
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 61/193 (31%)
Query: 503 LGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEE---FMNEVMVISNLQHRNLVRLLGC 559
+G+G FG V+ + + Q++ + + ++E NE V+ L H N++
Sbjct: 8 VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYEN 67
Query: 560 CVEREENMLIYEYMPNKS------------------LDSF-------------------- 581
+E + M++ EY P + L F
Sbjct: 68 FLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDL 127
Query: 582 ---------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-FSEKSD 625
+ DFG+++I ++ +A T +VGT Y+SPE EG+ +++KSD
Sbjct: 128 KTQNILLDKHKMVVKIGDFGISKILS-SKSKAYT--VVGTPCYISPELC-EGKPYNQKSD 183
Query: 626 VFSFGVLLLEIVS 638
+++ G +L E+ S
Sbjct: 184 IWALGCVLYELAS 196
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 3e-06
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 54/189 (28%)
Query: 502 KLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+G+G G V ++ G+ +AVK++ Q +E NEV+++ + QH N+V +
Sbjct: 27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ E++ +L DS
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDS 146
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A++ +++ K LVGT +M+PE + + D++S G
Sbjct: 147 ILLTHDGRVKLSDFGFCAQV---SKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLG 203
Query: 631 VLLLEIVSG 639
++++E+V G
Sbjct: 204 IMVIEMVDG 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 3e-06
Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 60/205 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLS----KASGQGQ--EEFMNEVMVISNL 548
+ +LG G F Y+ + ++ G +AVK+++ +S Q + E E+ +++ L
Sbjct: 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL 60
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDF-----------------GLA--- 588
H +++R+LG E L E+M S+ L + GL+
Sbjct: 61 NHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLH 120
Query: 589 -----------------------RI--FGGNQDQAAT--------KRLVGTYGYMSPEYA 615
RI FG AA +L+GT +M+PE
Sbjct: 121 ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVL 180
Query: 616 MEGRFSEKSDVFSFGVLLLEIVSGR 640
++ DV+S G +++E+ + +
Sbjct: 181 RGEQYGRSCDVWSVGCVIIEMATAK 205
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 3e-06
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Query: 499 LANKLGQGGFGPVYKGKL-QDGQ--EIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNL 553
L LG+G FG V +G+L QD ++AVK + A + E+F++E + + H N+
Sbjct: 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNV 62
Query: 554 VRLLGCCVEREEN------MLIYEYMPNKSLDSFLF 583
+RL+G C++ E+ ++I +M + L SFL
Sbjct: 63 MRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLL 98
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 3e-06
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMN--EVMVISNLQ-HRN 552
+++ +LG G FG VY + + G+ +A+K++ K EE MN EV + L H N
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKM-KKKFYSWEECMNLREVKSLRKLNEHPN 59
Query: 553 LVRLLGCCVEREENMLIYEYM 573
+V+L E +E ++EYM
Sbjct: 60 IVKLKEVFRENDELYFVFEYM 80
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 3e-06
Identities = 42/198 (21%), Positives = 80/198 (40%), Gaps = 57/198 (28%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQ-EEFMNEVMVISNLQH---R 551
+Q +G+G +G VY+GK + G+ +A+K ++ + + EV ++S L+
Sbjct: 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPP 62
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSF------------------------------ 581
N+ + G ++ +I EY S+ +
Sbjct: 63 NITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGV 122
Query: 582 -------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-FS 621
L DFG+A + N + +T VGT +M+PE EG+ +
Sbjct: 123 IHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRST--FVGTPYWMAPEVITEGKYYD 180
Query: 622 EKSDVFSFGVLLLEIVSG 639
K+D++S G+ + E+ +G
Sbjct: 181 TKADIWSLGITIYEMATG 198
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 4e-06
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 32/134 (23%)
Query: 515 KLQDGQEIAVKRLSKASGQGQE-----EFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569
K +G ++ + +L + Q E E N + HR+L R N+L+
Sbjct: 92 KTPEGIKLTINKLIDMAAQIAEGMAFIERKNYI-------HRDL---------RAANILV 135
Query: 570 YEYMPNKSLDSFLFDFGLARIFGGNQ--DQAATKRLVGTYGYMSPEYAMEGRFSEKSDVF 627
E + K + DFGLAR+ N+ + K + + +PE G F+ KSDV+
Sbjct: 136 SETLCCK-----IADFGLARLIEDNEYTAREGAKFPIK---WTAPEAINYGTFTIKSDVW 187
Query: 628 SFGVLLLEIVS-GR 640
SFG+LL EIV+ GR
Sbjct: 188 SFGILLTEIVTYGR 201
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 4e-06
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 59/204 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRL-----SKASGQGQEEFMNEVMVISNLQ 549
N++L LGQG FG VY D G+E+AVK++ S + + E+ ++ NL
Sbjct: 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL 62
Query: 550 HRNLVRLLGCCVEREENML--IYEYMPNKSLDSFLFDFG--------------------- 586
H +V+ GC + E L E+MP S+ L +G
Sbjct: 63 HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYL 122
Query: 587 --------------LARIFGGN---QDQAATKRL-------------VGTYGYMSPEYAM 616
+ R GN D A+KRL GT +MSPE
Sbjct: 123 HSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVIS 182
Query: 617 EGRFSEKSDVFSFGVLLLEIVSGR 640
+ K+D++S G ++E+++ +
Sbjct: 183 GEGYGRKADIWSVGCTVVEMLTEK 206
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.6 bits (117), Expect = 5e-06
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 60/195 (30%)
Query: 502 KLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEF----MNEVMVISNLQHRNLVRL 556
KLG+G +G VYK + + G+ +A+K++ +E + E+ ++ L+H N+V+L
Sbjct: 6 KLGEGTYGVVYKARDKKTGEIVALKKI--RLDNEEEGIPSTALREISLLKELKHPNIVKL 63
Query: 557 LGCCVEREENMLIYEYMPN---KSLD------------SFLF------------------ 583
L + L++EY K LD S ++
Sbjct: 64 LDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRD 123
Query: 584 -----------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS-D 625
DFGLAR F G + T +V T Y +PE + + + D
Sbjct: 124 LKPQNILINRDGVLKLADFGLARAF-GIPLRTYTHEVV-TLWYRAPEILLGSKHYSTAVD 181
Query: 626 VFSFGVLLLEIVSGR 640
++S G + E+++G+
Sbjct: 182 IWSVGCIFAEMITGK 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 7e-06
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQGQEE---FMNEVMVISNLQH 550
+FQ+ ++GQGG+G V+ K +D EI A+KR+ K+ E + E +++ +
Sbjct: 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS 60
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGL 587
LV+LL + E L EY+P + L + G+
Sbjct: 61 EWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGV 97
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 7e-06
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 67/204 (32%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVK--RLSKASGQGQEE-----FMNEVMVISNL 548
+Q K+G+G +G VYK + G+ +A+K RL + ++E + E+ ++ L
Sbjct: 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRL-----ETEDEGVPSTAIREISLLKEL 55
Query: 549 QHRNLVRLLGCCVEREENMLIYEYM-----------PNKSLD-----SFLF--------- 583
H N+VRLL + L++E++ P LD S+L+
Sbjct: 56 NHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYC 115
Query: 584 --------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
DFGLAR FG + T +V T Y +PE +
Sbjct: 116 HSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV-RTYTHEVV-TLWYRAPEILLG 173
Query: 618 GR-FSEKSDVFSFGVLLLEIVSGR 640
R +S D++S G + E+V+ R
Sbjct: 174 SRQYSTPVDIWSIGCIFAEMVNRR 197
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 8e-06
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 65/202 (32%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLS-KASGQGQEEFM-NEVMVISNLQ---H 550
++ ++G+G +G VYK + L G+ +A+K++ S +G E+ ++ L+ H
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEH 60
Query: 551 RNLVRLLGCC----VEREENM-LIYEYM-----------PNKSLDS-------------- 580
N+VRLL C +RE + L++E++ P L
Sbjct: 61 PNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGV 120
Query: 581 -FLF-------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEY 614
FL DFGLARI+ + A +V T Y +PE
Sbjct: 121 DFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS---FEMALTSVVVTLWYRAPEV 177
Query: 615 AMEGRFSEKSDVFSFGVLLLEI 636
++ ++ D++S G + E+
Sbjct: 178 LLQSSYATPVDMWSVGCIFAEL 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 9e-06
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFM--NEVMVISNLQHRNL 553
+++ +G+G FG V K + DG+ + K + + +E+ +EV ++ L+H N+
Sbjct: 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI 61
Query: 554 VRLLGCCVEREENMLIYEYM 573
VR ++R N +Y M
Sbjct: 62 VRYYDRIIDR-SNQTLYIVM 80
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 65/197 (32%)
Query: 502 KLGQGGFGPVYKG--KLQDGQE-IAVKRLSKASGQG--QEEFMNEVMVISNLQHRNLVRL 556
+LG G FG V KG K++ ++ +AVK L + ++E + E V+ L + +VR+
Sbjct: 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRM 61
Query: 557 LGCCVEREENMLIYEYMPNKSLDSFL---------------------------------- 582
+G C E E ML+ E L+ FL
Sbjct: 62 IGIC-EAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRD 120
Query: 583 ----------------FDFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYAMEGRFS 621
DFGL++ G +++ K T+G + +PE +FS
Sbjct: 121 LAARNVLLVTQHYAKISDFGLSKALGADENYYKAK----THGKWPVKWYAPECMNYYKFS 176
Query: 622 EKSDVFSFGVLLLEIVS 638
KSDV+SFGVL+ E S
Sbjct: 177 SKSDVWSFGVLMWEAFS 193
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 1e-05
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK 641
L D GL R F + A LVGT YMSPE E ++ KSD++S G LL E+ + +
Sbjct: 147 LGDLGLGRFF--SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ- 203
Query: 642 NTSFYHEEFEL 652
+ FY ++ L
Sbjct: 204 -SPFYGDKMNL 213
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 47.4 bits (112), Expect = 1e-05
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 51/186 (27%)
Query: 502 KLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEF---MNEVMVISNLQHRNLVRLL 557
++G G FG VY + +++ + +A+K++S + Q E++ + EV + L+H N ++
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 558 GCCVEREENMLIYEYMPNKSLD-------------------------------------- 579
GC + L+ EY + D
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV 141
Query: 580 ----SFLFDFGLARI--FGGNQDQAATKRLVGTYGYMSPEYAM---EGRFSEKSDVFSFG 630
L + GL ++ FG A VGT +M+PE + EG++ K DV+S G
Sbjct: 142 KAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 201
Query: 631 VLLLEI 636
+ +E+
Sbjct: 202 ITCIEL 207
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 2e-05
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEI----AVKRLSKA-SGQGQEEFMNEVMVISNLQH 550
F+ LG G FG VYKG + +G+++ A+K L +A S + +E ++E V++++ +
Sbjct: 9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68
Query: 551 RNLVRLLGCCVEREENMLIYEYMP 574
++ RLLG C+ LI + MP
Sbjct: 69 PHVCRLLGICLTSTVQ-LITQLMP 91
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 72/210 (34%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQE-IAVKRLSKASGQGQEEFM-----NEVMVISNLQ 549
++ ++G+G +G V+K + L++G +A+KR+ Q EE M EV V+ +L+
Sbjct: 3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV---QTGEEGMPLSTIREVAVLRHLE 59
Query: 550 ---HRNLVRLLGCCV----EREENM-LIYEYM----------------PNKSLDSFLF-- 583
H N+VRL C +RE + L++E++ P +++ +F
Sbjct: 60 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 119
Query: 584 ---------------------------------DFGLARIFGGNQDQAATKRLVGTYGYM 610
DFGLARI+ Q A +V T Y
Sbjct: 120 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYR 176
Query: 611 SPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
+PE ++ ++ D++S G + E+ +
Sbjct: 177 APEVLLQSSYATPVDLWSVGCIFAEMFRRK 206
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG+AR I+ + + + ++ +M PE ++G F+ K+DV+SFGVLL EI S
Sbjct: 162 DFGMARDIYRASYYRKGGRAML-PIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 46.7 bits (109), Expect = 3e-05
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 20/102 (19%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQ----DQAATK 601
+ HR++ + EN+L+ L DFGLA++ A
Sbjct: 120 KGIIHRDI---------KPENILLDRDGRVVKLI----DFGLAKLLPDPGSTSSIPALPS 166
Query: 602 RLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGR 640
VGT GYM+PE + S SD++S G+ L E+++G
Sbjct: 167 TSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGL 208
|
Length = 384 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 3e-05
Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 59/197 (29%)
Query: 501 NKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMN-----EVMVISNLQHRNLV 554
KLG+G + VYK + + G+ +A+K++ + ++ +N E+ ++ L+H N++
Sbjct: 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNII 65
Query: 555 RLLGCCVEREENMLIYEYMP--------NKSL---------------------------- 578
LL + L++E+M +KS+
Sbjct: 66 GLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILH 125
Query: 579 ----------DSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-FSEK 623
S L DFGLAR F G+ ++ T ++V T Y +PE R +
Sbjct: 126 RDLKPNNLLIASDGVLKLADFGLARSF-GSPNRKMTHQVV-TRWYRAPELLFGARHYGVG 183
Query: 624 SDVFSFGVLLLEIVSGR 640
D++S G + E++
Sbjct: 184 VDMWSVGCIFAELLLRV 200
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 3e-05
Identities = 56/204 (27%), Positives = 80/204 (39%), Gaps = 68/204 (33%)
Query: 503 LGQGGFGPVYKGKLQ-DGQEI--AVKRLSK-ASGQGQEEFMNEVMVISNL-QHRNLVRLL 557
+G+G FG V + ++ DG ++ A+K L + AS +F E+ V+ L H N++ LL
Sbjct: 10 IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLL 69
Query: 558 GCCVEREENMLIYEYMPNKSLDSFL-------FDFGLARIFGG----------------- 593
G C R + EY P +L FL D A+ G
Sbjct: 70 GACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVA 129
Query: 594 ------------NQDQAATKRLVG----------------------TYG-----YMSPEY 614
++D AA LVG T G +M+ E
Sbjct: 130 TGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIES 189
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVS 638
++ KSDV+SFGVLL EIVS
Sbjct: 190 LNYSVYTTKSDVWSFGVLLWEIVS 213
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G + VGT YMSPE G+++ KSDV+S G+ ++E+ G+
Sbjct: 145 LCDFGVS----GELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGK 199
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRL-----SKASGQGQEEFMNEVMVISNLQ 549
N++L LG+G FG VY D G+E+AVK++ S+ + + E+ ++ NL+
Sbjct: 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR 62
Query: 550 HRNLVRLLGCCVEREENML--IYEYMPNKSLDSFLFDFG 586
H +V+ GC + EE L EYMP S+ L +G
Sbjct: 63 HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYG 101
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 4e-05
Identities = 44/198 (22%), Positives = 76/198 (38%), Gaps = 60/198 (30%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMN--EVMVISNLQ-HRN 552
+++ K+G+G F V K + + G+ A+K + K + E+ N E+ + L H N
Sbjct: 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCM-KKHFKSLEQVNNLREIQALRRLSPHPN 59
Query: 553 LVRLLGCCVEREEN----------MLIYEYMPN------------------KSLDSF--- 581
++RL+ +R+ M +YE + KSLD
Sbjct: 60 ILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN 119
Query: 582 --------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM-EGRF 620
L DFG R G T+ + T Y +PE + +G +
Sbjct: 120 GIFHRDIKPENILIKDDILKLADFGSCR--GIYSKPPYTE-YISTRWYRAPECLLTDGYY 176
Query: 621 SEKSDVFSFGVLLLEIVS 638
K D+++ G + EI+S
Sbjct: 177 GPKMDIWAVGCVFFEILS 194
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 5e-05
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 492 NATNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
N ++++L ++G G +G VYK L G+ AVK + G E+ ++ +H
Sbjct: 6 NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKH 65
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSL 578
N+V G + RE+ + EY SL
Sbjct: 66 CNIVAYFGSYLSREKLWICMEYCGGGSL 93
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 6e-05
Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 51/191 (26%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEF---MNEVMVISNLQHRN 552
F ++G G FG VY + ++ + +A+K++S + Q E++ + EV + L+H N
Sbjct: 17 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPN 76
Query: 553 LVRLLGCCVEREENMLIYEY-----------------------MPNKSLDSFLFDFGLAR 589
+ GC + L+ EY + + +L + R
Sbjct: 77 TIEYKGCYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHER 136
Query: 590 I---------------------FGGNQDQAATKRLVGTYGYMSPE--YAM-EGRFSEKSD 625
I FG + VGT +M+PE AM EG++ K D
Sbjct: 137 IHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVD 196
Query: 626 VFSFGVLLLEI 636
V+S G+ +E+
Sbjct: 197 VWSLGITCIEL 207
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 6e-05
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDG-----QEIAVKRLSKASGQGQ-EEFMNEVMVISNLQH 550
L++ L +G FG ++ G L D +E+ VK + + + Q + E ++ L H
Sbjct: 8 VTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSH 67
Query: 551 RNLVRLLGCCVEREEN-MLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKR 602
+N++ +L C+E E ++Y YM +L FL R+ N QA + +
Sbjct: 68 QNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQ---CRLGEANNPQALSTQ 117
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 6e-05
Identities = 40/189 (21%), Positives = 79/189 (41%), Gaps = 54/189 (28%)
Query: 502 KLGQGGFGPV-YKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
K+G+G G V + G+++AVK++ Q +E NEV+++ + H N+V +
Sbjct: 29 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY 88
Query: 561 VEREENMLIYEYMPNKSL----------------------------------------DS 580
+ +E ++ E++ +L DS
Sbjct: 89 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDS 148
Query: 581 FLF---------DFGL-ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
L DFG A++ +++ K LVGT +M+PE + + D++S G
Sbjct: 149 ILLTSDGRIKLSDFGFCAQV---SKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLG 205
Query: 631 VLLLEIVSG 639
++++E++ G
Sbjct: 206 IMVIEMIDG 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 6e-05
Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 53/192 (27%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
++L ++G G +G VYK + + G+ +A+K + G E E+ ++ +H N+V
Sbjct: 5 YELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVA 64
Query: 556 LLGCCVEREENMLIYEYMPNKSLD--------------------------SFLFDFGLAR 589
G + R++ ++ EY SL ++L + G
Sbjct: 65 YFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIH 124
Query: 590 --IFGGN-------------------QDQAATKR--LVGTYGYMSPEYA---MEGRFSEK 623
I G N KR +GT +M+PE A +G + K
Sbjct: 125 RDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGK 184
Query: 624 SDVFSFGVLLLE 635
D+++ G+ +E
Sbjct: 185 CDIWALGITAIE 196
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 7e-05
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 55/195 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+++ +LG G FG VYK K ++ G A K + S + E++M E+ +++ H +V+
Sbjct: 14 WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVK 73
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFL--FDFGLA---------------------RI-- 590
LLG + ++ E+ P ++D+ + D GL +I
Sbjct: 74 LLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIH 133
Query: 591 --------------------FGGNQDQAAT--KR--LVGTYGYMSPEYAM-----EGRFS 621
FG + T +R +GT +M+PE M + +
Sbjct: 134 RDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYD 193
Query: 622 EKSDVFSFGVLLLEI 636
K+D++S G+ L+E+
Sbjct: 194 YKADIWSLGITLIEM 208
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 8e-05
Identities = 45/201 (22%), Positives = 81/201 (40%), Gaps = 58/201 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEI-AVK--RLSKASGQGQEEFMNEVMVISNLQHRN 552
F+ N++G+G +G VY+ + EI A+K R+ + E+ ++ NL+H N
Sbjct: 8 EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPN 67
Query: 553 LVRLLGCCVEREEN--MLIYEY-----------MPN-------KSL------------DS 580
+V L V + + L+ EY MP K L ++
Sbjct: 68 IVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN 127
Query: 581 FLF--------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
F+ DFGLAR + G + T ++V T Y +PE +
Sbjct: 128 FIIHRDLKVSNLLLTDKGCLKIADFGLARTY-GLPAKPMTPKVV-TLWYRAPELLLGCTT 185
Query: 621 SEKS-DVFSFGVLLLEIVSGR 640
+ D+++ G +L E+++ +
Sbjct: 186 YTTAIDMWAVGCILAELLAHK 206
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 609 YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
+++PE E FS KSDV+SFGVL+ E+ +
Sbjct: 184 WLAPEAVQEDDFSTKSDVWSFGVLMWEVFT 213
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 22/79 (27%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 493 ATNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEF----MNEVMVISN 547
++++ KLG+G FG VYK +++ G+ +A+K++ + ++ F + E+ ++
Sbjct: 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHN--EKDGFPITALREIKILKK 63
Query: 548 LQHRNLVRLLGCCVEREEN 566
L+H N+V L+ VER +
Sbjct: 64 LKHPNVVPLIDMAVERPDK 82
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 1e-04
Identities = 55/204 (26%), Positives = 79/204 (38%), Gaps = 68/204 (33%)
Query: 503 LGQGGFGPVYKGKLQ-DGQEI--AVKRLSK-ASGQGQEEFMNEVMVISNL-QHRNLVRLL 557
+G+G FG V K +++ DG + A+KR+ + AS +F E+ V+ L H N++ LL
Sbjct: 3 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 62
Query: 558 GCCVEREENMLIYEYMPNKSLDSFL-------FDFGLARIFGG----------------- 593
G C R L EY P+ +L FL D A
Sbjct: 63 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 122
Query: 594 ------------NQDQAATKRLVG----------------------TYG-----YMSPEY 614
++D AA LVG T G +M+ E
Sbjct: 123 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES 182
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVS 638
++ SDV+S+GVLL EIVS
Sbjct: 183 LNYSVYTTNSDVWSYGVLLWEIVS 206
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 1e-04
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 560 CVERE---ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQD--QAATKRLVGTYGYMSPEY 614
C+ R+ N+L+ E K + DFGLAR + D + RL +M+PE
Sbjct: 194 CIHRDLAARNILLSENNVVK-----ICDFGLARDIYKDPDYVRKGDARL--PLKWMAPES 246
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVS 638
+ ++ +SDV+SFGVLL EI S
Sbjct: 247 IFDKVYTTQSDVWSFGVLLWEIFS 270
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 58/195 (29%)
Query: 502 KLGQGGFGPVYKGKLQDGQE-IAVK--RLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
K+G+G +G VYK + + E IA+K RL + + E+ ++ +QH N+VRL
Sbjct: 9 KIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68
Query: 559 CCVEREENMLIYEYMP---NKSLDS-------------FLF------------------- 583
+ L++EY+ K +DS +L+
Sbjct: 69 VVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDL 128
Query: 584 -----------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-FSEKSD 625
DFGLAR F G + T +V T Y +PE + R +S D
Sbjct: 129 KPQNLLIDRRTNALKLADFGLARAF-GIPVRTFTHEVV-TLWYRAPEILLGSRHYSTPVD 186
Query: 626 VFSFGVLLLEIVSGR 640
++S G + E+V+ +
Sbjct: 187 IWSVGCIFAEMVNQK 201
|
Length = 294 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 43/187 (22%), Positives = 72/187 (38%), Gaps = 51/187 (27%)
Query: 501 NKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQGQEEF---MNEVMVISNLQHRNLVRL 556
+++G G FG VY E+ AVK++S + Q E++ + EV + L+H N +
Sbjct: 27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEY 86
Query: 557 LGCCVEREENMLIYEYMPNKSLDSF------LFDFGLARI-------------------- 590
GC ++ L+ EY + D L + +A I
Sbjct: 87 KGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRD 146
Query: 591 ------------------FGGNQDQAATKRLVGTYGYMSPEYAM---EGRFSEKSDVFSF 629
FG + VGT +M+PE + EG++ K DV+S
Sbjct: 147 IKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 206
Query: 630 GVLLLEI 636
G+ +E+
Sbjct: 207 GITCIEL 213
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 609 YMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFE 651
+M PE M +F+ +SDV+SFGV+L EI + K + E
Sbjct: 190 WMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE 232
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 52/197 (26%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
N +F+L ++G G +G VYK + + G+ A+K + G+ E++++ + +H
Sbjct: 6 NPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH 65
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDS------------------------------ 580
N+V G + R++ + E+ SL
Sbjct: 66 SNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK 125
Query: 581 ------------FLFDFGLARI--FGGNQDQAAT----KRLVGTYGYMSPEYAM---EGR 619
L D G ++ FG + AT K +GT +M+PE A +G
Sbjct: 126 GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGG 185
Query: 620 FSEKSDVFSFGVLLLEI 636
+++ D+++ G+ +E+
Sbjct: 186 YNQLCDIWAVGITAIEL 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 45/210 (21%), Positives = 86/210 (40%), Gaps = 69/210 (32%)
Query: 497 FQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEF----MNEVMVISNLQHR 551
F + ++G+G +G VYK + +D G+ +A+K++ + +E F + E+ ++ L HR
Sbjct: 9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDN--EKEGFPITAIREIKILRQLNHR 66
Query: 552 NLVRLLGCCVEREENM----------LIYEYMP------------------NKSLDSFLF 583
N+V L ++++ + L++EYM KS L
Sbjct: 67 NIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLL 126
Query: 584 D--------------------------------FGLARIFGGNQDQAATKRLVGTYGYMS 611
+ FGLAR++ + + T +++ T Y
Sbjct: 127 EGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVI-TLWYRP 185
Query: 612 PEYAM-EGRFSEKSDVFSFGVLLLEIVSGR 640
PE + E R+ DV+S G +L E+ + +
Sbjct: 186 PELLLGEERYGPAIDVWSCGCILGELFTKK 215
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 67/204 (32%)
Query: 503 LGQGGFGPVYKG-KLQDGQEIAVKR--LSKASGQGQEEFM--------NEVMVISNLQHR 551
+G+G +G VY + G+ +AVK+ L + +E+ + +L H
Sbjct: 9 IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68
Query: 552 NLVRLLGCCVEREENML-IY-EYMPNKSL------------------------------- 578
N+V+ LG E E L I+ EY+P S+
Sbjct: 69 NIVQYLGF--ETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHS 126
Query: 579 ----------DSFLFDF-GLARI--FGGNQ------DQAATKRLVGTYGYMSPEYAMEGR 619
D+ L D G+ +I FG ++ D + G+ +M+PE
Sbjct: 127 KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYS 186
Query: 620 --FSEKSDVFSFGVLLLEIVSGRK 641
+S K D++S G ++LE+ +GR+
Sbjct: 187 QGYSAKVDIWSLGCVVLEMFAGRR 210
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 43/198 (21%), Positives = 75/198 (37%), Gaps = 62/198 (31%)
Query: 503 LGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQG---QEEFMNEVMVISNLQHRNLVRLLG 558
+ +G +G V+ K G A+K + KA ++ + E ++S Q +V+L
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLY- 59
Query: 559 CCVEREENM-LIYEYMPN-------KSLDSF----------------------------- 581
+ ++N+ L+ EY+P +++ S
Sbjct: 60 YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDL 119
Query: 582 --------------LFDFGLA------RIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
L DFGL+ R N D+ KR+VGT Y++PE + S
Sbjct: 120 KPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHS 179
Query: 622 EKSDVFSFGVLLLEIVSG 639
+ D +S G +L E + G
Sbjct: 180 KTVDWWSLGCILYEFLVG 197
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 47/201 (23%), Positives = 76/201 (37%), Gaps = 59/201 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKA---SGQGQEEFMNEVMVISNLQHR 551
+F+L +G+G FG V + +D +++ A+K ++K +NE ++ L H
Sbjct: 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP 60
Query: 552 NLVRLLGCCVEREENM-----------LIY------------------------EYMPNK 576
LV L + EENM L Y EY+ +K
Sbjct: 61 FLVNLWYS-FQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK 119
Query: 577 SL-------DSFLFD---------FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
+ D+ L D F +A + +T GT GYM+PE +
Sbjct: 120 GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTST---SGTPGYMAPEVLCRQGY 176
Query: 621 SEKSDVFSFGVLLLEIVSGRK 641
S D +S GV E + G++
Sbjct: 177 SVAVDWWSLGVTAYECLRGKR 197
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 497 FQLANKLGQGGFGPVYKGKLQ---DGQEIAVKRLSKASGQGQEEFMN---EVMVISNLQH 550
+++ +G+G +G VYK K + DG+E A+K+ Q + E+ ++ L+H
Sbjct: 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61
Query: 551 RNLVRLLGCCVEREENM--LIYEY 572
N+V L+ +E + L+++Y
Sbjct: 62 ENVVSLVEVFLEHADKSVYLLFDY 85
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLS---KASGQGQEEFMNEVMVISNLQ 549
NF++ K+G+G F VYK L DG+ +A+K++ + +++ + E+ ++ L
Sbjct: 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60
Query: 550 HRNLVRLLGCCVEREENMLI 569
H N+++ L + E N L
Sbjct: 61 HPNVIKYLASFI--ENNELN 78
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 3e-04
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 502 KLGQGGFGPVYKGKLQDGQEI-AVKRLS-KASGQGQEEF-MNEVMVISNLQHRNLVRLLG 558
K+G+G +G V+K K ++ EI A+KR+ +G + E+ ++ L+H+N+VRL
Sbjct: 7 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYD 66
Query: 559 CCVEREENMLIYEY 572
++ L++EY
Sbjct: 67 VLHSDKKLTLVFEY 80
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 3e-04
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEI 636
DFG++R+ G+ D A T GT YMSPE + KSD++S G +L E+
Sbjct: 148 DFGVSRLLMGSCDLATT--FTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEM 198
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 3e-04
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 502 KLGQGGFGPVYKGKLQDGQEIA---VKRL-SKASGQGQEEFMNEVMVISNLQHRNLVRLL 557
++G G FG V ++ +A VK L + AS + Q EF+ + LQH N+++ L
Sbjct: 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCL 61
Query: 558 GCCVEREENMLIYEYMPNKSLDSFL 582
G CVE +L++EY L S+L
Sbjct: 62 GQCVEAIPYLLVFEYCELGDLKSYL 86
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 43.2 bits (101), Expect = 3e-04
Identities = 41/191 (21%), Positives = 74/191 (38%), Gaps = 51/191 (26%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEF---MNEVMVISNLQHRN 552
F ++G G FG VY + ++ + +A+K++S + Q E++ + EV + ++H N
Sbjct: 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSF------LFDFGLARI---------------- 590
+ GC + L+ EY + D L + +A I
Sbjct: 87 SIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM 146
Query: 591 ----------------------FGGNQDQAATKRLVGTYGYMSPEYAM---EGRFSEKSD 625
FG + VGT +M+PE + EG++ K D
Sbjct: 147 IHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKVD 206
Query: 626 VFSFGVLLLEI 636
V+S G+ +E+
Sbjct: 207 VWSLGITCIEL 217
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 3e-04
Identities = 45/202 (22%), Positives = 75/202 (37%), Gaps = 53/202 (26%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLV 554
F ++G+G FG VYKG +E+ A+K + + + E+ E+ V+S +
Sbjct: 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 65
Query: 555 RLLGCCVEREENMLIYEYMPN-------------------------KSLDSF-------- 581
R G ++ + +I EY+ K LD
Sbjct: 66 RYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHR 125
Query: 582 ----------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSD 625
L DFG+A Q + T VGT +M+PE + + K+D
Sbjct: 126 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDFKAD 183
Query: 626 VFSFGVLLLEIVSGRKNTSFYH 647
++S G+ +E+ G S H
Sbjct: 184 IWSLGITAIELAKGEPPNSDLH 205
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 3e-04
Identities = 42/199 (21%), Positives = 76/199 (38%), Gaps = 58/199 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKR--LSKASGQGQEEFMNEVMVISNLQHRN 552
+++ K+G+G FG +Y K + D + +K L+K + +E EV++++ ++H N
Sbjct: 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60
Query: 553 LVRLLGCCVEREENMLIYEYMPN------------------------------------- 575
+V E ++ EY
Sbjct: 61 IVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR 120
Query: 576 -------KSLDSFLFDFGL---------ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR 619
KS + FL G+ AR + + A T VGT Y+SPE
Sbjct: 121 KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYT--CVGTPYYLSPEICQNRP 178
Query: 620 FSEKSDVFSFGVLLLEIVS 638
++ K+D++S G +L E+ +
Sbjct: 179 YNNKTDIWSLGCVLYELCT 197
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 4e-04
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 497 FQLANKLGQGGFGPVYKG--KLQDG--QEIAVKRLSKA---SGQGQEEFMNEVMVISNLQ 549
F L LG+G FG V + K +DG Q++AVK L KA S EEF+ E +
Sbjct: 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKML-KADIFSSSDIEEFLREAACMKEFD 59
Query: 550 HRNLVRLLGCCVEREEN------MLIYEYMPNKSLDSFLF 583
H N+++L+G + M+I +M + L +FL
Sbjct: 60 HPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLL 99
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRL--SKASGQGQEEFMNEVMVISNLQHR 551
++ +G+G +G V K K ++ GQ +A+K+ S+ ++ M E+ ++ L+H
Sbjct: 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHE 60
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLD 579
NLV L+ ++ L++E++ + LD
Sbjct: 61 NLVNLIEVFRRKKRLYLVFEFVDHTVLD 88
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ A T GT YM+PE +S SDV+S G+ LLE+ R
Sbjct: 146 LCDFGVSGELV--NSLAGT--FTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNR 200
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 4e-04
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
D G+AR+ D A+T L+GT YMSPE ++ KSDV++ G + E+ +
Sbjct: 145 DLGIARVLENQCDMAST--LIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMAT 197
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 4e-04
Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRL--SKASGQGQEEFMNEVMVISNLQHR 551
N F++ +G+G +G V K + ++ +EI A+K+ S+ + + +E + E+ ++ L+
Sbjct: 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE 60
Query: 552 NLVRLLGCCVEREENMLIYEY-----------MPN----KSLDSFLF------------- 583
N+V L R + L++EY MPN + + S+++
Sbjct: 61 NIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND 120
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
DFG AR + T+ V T Y SPE + +
Sbjct: 121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE-YVATRWYRSPELLLGAPYG 179
Query: 622 EKSDVFSFGVLLLEIVSGR 640
+ D++S G +L E+ G+
Sbjct: 180 KAVDMWSVGCILGELSDGQ 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 8e-04
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 566 NMLIYEYMPNKSLDSFLFDFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
N+LI E + K + D GL+R I+ + + K L+ +M PE M G+FS S
Sbjct: 154 NILIGEQLHVK-----ISDLGLSREIYSADYYRVQPKSLLPIR-WMPPEAIMYGKFSSDS 207
Query: 625 DVFSFGVLLLEIVS 638
D++SFGV+L EI S
Sbjct: 208 DIWSFGVVLWEIFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 41.6 bits (97), Expect = 8e-04
Identities = 43/202 (21%), Positives = 75/202 (37%), Gaps = 53/202 (26%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLV 554
F ++G+G FG V+KG Q++ A+K + + + E+ E+ V+S +
Sbjct: 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65
Query: 555 RLLGCCVEREENMLIYEYMPNKS---------LDSF------------------------ 581
+ G ++ + +I EY+ S D F
Sbjct: 66 KYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHR 125
Query: 582 ----------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSD 625
L DFG+A Q + T VGT +M+PE + + K+D
Sbjct: 126 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYDSKAD 183
Query: 626 VFSFGVLLLEIVSGRKNTSFYH 647
++S G+ +E+ G S H
Sbjct: 184 IWSLGITAIELAKGEPPNSDMH 205
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 499 LANKLGQGGFGPVYKGKLQD------GQEIAVKRL-SKASGQGQEEFMNEVMVISNL-QH 550
L LG+G FG V K + +AVK L A+ + + ++E+ ++ + +H
Sbjct: 16 LGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 75
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+N++ LLG C + ++ EY + +L FL
Sbjct: 76 KNIINLLGVCTQEGPLYVVVEYAAHGNLRDFL 107
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.001
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G D A VGT YMSPE ++ +SD++S G+ L+E+ GR
Sbjct: 141 LCDFGVS---GQLIDSMANS-FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGR 195
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.001
Identities = 52/201 (25%), Positives = 76/201 (37%), Gaps = 74/201 (36%)
Query: 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLG 558
+G+GGFG VY + D G+ A+K L K QG+ +NE +++S LV
Sbjct: 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS------LVSTGD 55
Query: 559 C----C-------------------------------VEREENMLIY--------EYMPN 575
C C V E M Y E+M N
Sbjct: 56 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHN 115
Query: 576 KS------------LDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG- 618
+ LD + D GLA F + A+ VGT+GYM+PE +G
Sbjct: 116 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGV 171
Query: 619 RFSEKSDVFSFGVLLLEIVSG 639
+ +D FS G +L +++ G
Sbjct: 172 AYDSSADWFSLGCMLFKLLRG 192
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.001
Identities = 27/120 (22%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGKLQDGQEIAV-KRLSKASGQGQEEFMNEVMVISNLQH 550
N +++ +LG G FG VYK + ++ +A K + S + E++M E+ ++++ H
Sbjct: 2 NPEEFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDH 61
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYM 610
N+V+LL ++ E+ ++D+ + + L R Q + K+ + Y+
Sbjct: 62 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYL 119
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.002
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G + VGT YMSPE +S +SD++S G+ L+E+ GR
Sbjct: 145 LCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGR 199
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.002
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK 641
L DFG ++++ + GT Y++PE +S+K+D+FS GVLL E+++ ++
Sbjct: 184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKR 243
|
Length = 496 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 42/205 (20%), Positives = 75/205 (36%), Gaps = 65/205 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN----EVMVISNLQ 549
N +++ +G+G +G V K + + G+ +A+K+ K S + E+ EV V+ L+
Sbjct: 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKF-KES-EDDEDVKKTALREVKVLRQLR 58
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLD---------------SFLF----------- 583
H N+V L + L++EY+ L+ S+++
Sbjct: 59 HENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHS 118
Query: 584 ------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPE----YA 615
DFG AR T V T Y +PE
Sbjct: 119 HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD-YVATRWYRAPELLVGDT 177
Query: 616 MEGRFSEKSDVFSFGVLLLEIVSGR 640
G+ DV++ G ++ E++ G
Sbjct: 178 NYGK---PVDVWAIGCIMAELLDGE 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.002
Identities = 32/96 (33%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRL-SKASGQGQEEFMNEVMVISN 547
N LG G FG V + K +AVK L A +E M+E+ V+S
Sbjct: 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 94
Query: 548 L-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
L H N+V LLG C ++I EY L +FL
Sbjct: 95 LGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFL 130
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.002
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 490 LANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNL- 548
L + T F+L +G+G +G VYK + + ++ ++ +EE E ++
Sbjct: 1 LPDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS 60
Query: 549 QHRNLVRLLGC 559
H N+ G
Sbjct: 61 NHPNIATFYGA 71
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ G + VGT YMSPE +S +SD++S G+ L+E+ GR
Sbjct: 145 LCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGR 199
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 584 DFGLARIFGGNQD--QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D + + RL +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 217 DFGLARDIYKDPDYVRKGSARL--PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFS 271
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.003
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL + G +D A K GT Y++PE + + D + GV++ E++ GR
Sbjct: 139 DFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--L 194
Query: 644 SFYHEE----FELTLL 655
FY+++ FEL L+
Sbjct: 195 PFYNQDHEKLFELILM 210
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 40.1 bits (93), Expect = 0.003
Identities = 45/204 (22%), Positives = 75/204 (36%), Gaps = 57/204 (27%)
Query: 497 FQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLV 554
F K+G+G FG V+KG Q++ A+K + + + E+ E+ V+S +
Sbjct: 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65
Query: 555 RLLGCCVEREENMLIYEYMPN-------------------------KSLDSF-------- 581
+ G ++ + +I EY+ K LD
Sbjct: 66 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 125
Query: 582 ----------------LFDFGLARIFGGNQDQAATKR--LVGTYGYMSPEYAMEGRFSEK 623
L DFG+A G KR VGT +M+PE + + K
Sbjct: 126 DIKAANVLLSEHGEVKLADFGVA----GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 181
Query: 624 SDVFSFGVLLLEIVSGRKNTSFYH 647
+D++S G+ +E+ G S H
Sbjct: 182 ADIWSLGITAIELAKGEPPHSELH 205
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.003
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRL-SKASGQGQEEFMNEVMVISN 547
+N L LG G FG V + Q ++AVK L S A ++ M+E+ ++S+
Sbjct: 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSH 96
Query: 548 L-QHRNLVRLLGCCVEREENMLIYEY 572
L H N+V LLG C + +I EY
Sbjct: 97 LGPHLNIVNLLGACTKGGPIYIITEY 122
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.003
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSG--- 639
D GLA F + A+ VGT+GYM+PE +G + +D FS G +L +++ G
Sbjct: 140 DLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSP 195
Query: 640 --RKNTSFYHEEFELTL 654
+ T HE +TL
Sbjct: 196 FRQHKTKDKHEIDRMTL 212
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFG++ + K VGT YM+PE ++ SDV+S G+ +E+ GR
Sbjct: 136 LCDFGVST----QLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGR 190
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 503 LGQGGFGPVYKGK-LQDGQEI----AVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRL 556
LG G FG V+KG + +G I A+K + SG Q +E + ++ + +L H +VRL
Sbjct: 15 LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74
Query: 557 LGCCVEREENMLIYEYMPNKSL 578
LG C L+ + P SL
Sbjct: 75 LGIC-PGASLQLVTQLSPLGSL 95
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.004
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 582 LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
L DFG+AR+ + A T +GT Y+SPE ++ KSD+++ G +L E+ +
Sbjct: 142 LGDFGIARVLNSTVELART--CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCT 196
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.004
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYA----MEGRFSEKS-DVFSFGVLLLEIVS 638
DFG++RI Q VGT YMSPE G + + D++S GV +LE
Sbjct: 211 DFGVSRIL--AQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYL 268
Query: 639 GR 640
GR
Sbjct: 269 GR 270
|
Length = 353 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 501 NKLGQGGFGPVYKG--KLQDGQEIAVKRLSKASGQGQE-EFMNEVMVISNLQHRNLVRLL 557
+KLG+G + VYKG KL D +A+K + +G + EV ++ +L+H N+V L
Sbjct: 12 DKLGEGTYATVYKGRSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 70
Query: 558 GCCVEREENMLIYEYMPNKSLDSFLFDFG 586
+ L++EY+ +K L +L D G
Sbjct: 71 DIIHTEKSLTLVFEYL-DKDLKQYLDDCG 98
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 760 | |||
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.98 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.97 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.97 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 99.97 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.96 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.96 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 99.96 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.96 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.96 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.96 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.95 | |
| PF01453 | 114 | B_lectin: D-mannose binding lectin; InterPro: IPR0 | 99.95 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.95 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.95 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.95 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.95 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.95 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.95 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.95 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.95 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.94 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.94 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.94 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.94 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.94 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.94 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.94 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.94 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.93 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.93 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.93 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.93 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.93 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.93 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.93 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.93 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.93 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.93 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.93 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.93 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.93 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.93 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.93 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd00028 | 116 | B_lectin Bulb-type mannose-specific lectin. The do | 99.93 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.93 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.93 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.93 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.93 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.93 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.93 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.93 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.93 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.93 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.92 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.92 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.92 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.92 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.92 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.92 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.92 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.92 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.92 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.92 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.92 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.92 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.92 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.92 | |
| PF00954 | 110 | S_locus_glycop: S-locus glycoprotein family; Inter | 99.92 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.92 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.92 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.92 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.92 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.92 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.92 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.92 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.92 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.92 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.92 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.92 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.92 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.92 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.92 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.91 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.91 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.91 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.91 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.91 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.91 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.91 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.91 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.91 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.91 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.91 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.91 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.91 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.91 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.91 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.91 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.91 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.91 | |
| smart00108 | 114 | B_lectin Bulb-type mannose-specific lectin. | 99.91 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.91 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.91 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.91 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.91 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.91 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.91 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.91 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.91 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.91 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.91 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.91 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.91 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.91 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.91 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.91 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.91 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.91 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.91 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.91 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.91 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.91 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.91 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.91 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.91 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.91 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.91 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.91 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.91 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.91 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.9 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.9 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.9 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.9 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.9 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.9 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.9 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.9 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.9 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.9 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.9 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.9 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.9 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.9 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.9 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.9 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.9 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.9 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.9 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.9 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.9 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.9 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.9 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.9 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.9 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.9 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.9 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.9 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.9 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.9 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.9 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.9 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.9 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.9 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.9 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.9 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.9 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.9 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.9 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.9 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.9 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.9 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.9 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.9 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.9 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.9 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.9 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.9 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.9 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.9 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.9 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.9 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.9 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.9 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.9 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.89 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.89 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.89 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.89 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.89 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.89 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.89 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.89 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.89 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.89 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.89 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.89 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.89 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.89 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.89 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.89 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.89 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.89 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.89 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.89 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.89 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.89 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.89 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.89 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.89 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.89 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.89 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.89 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.89 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.89 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.89 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.89 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.89 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.89 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.88 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.88 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.88 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.88 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.88 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.88 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.88 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.88 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.88 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.88 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.88 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.88 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.88 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.88 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.88 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.88 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.88 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.88 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.88 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.88 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.88 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.87 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.87 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.87 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.87 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.87 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.87 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.87 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.87 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.87 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.87 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.87 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.87 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.87 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.87 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.87 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.87 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.87 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.87 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.87 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.87 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.86 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.86 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.86 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.86 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.86 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.86 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.86 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.86 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.86 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.86 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.86 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.86 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.86 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.86 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.86 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.86 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.86 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.86 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.86 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.85 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.85 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.85 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.85 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.85 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.85 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.85 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.85 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.85 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.85 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.85 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.84 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.84 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.84 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.84 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.84 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.84 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.83 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.83 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.83 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.83 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.83 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.82 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.82 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.82 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.81 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.81 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.81 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.8 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.8 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.79 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.79 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.79 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.78 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.78 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.78 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.78 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.76 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.76 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.74 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.73 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.72 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.72 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.71 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.71 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.71 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.7 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.69 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.68 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.66 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.66 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.66 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.64 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.6 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.56 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.56 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.55 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.5 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.48 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.44 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.38 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.32 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.26 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.21 | |
| PF08276 | 66 | PAN_2: PAN-like domain; InterPro: IPR013227 PAN do | 99.2 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.16 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.11 | |
| cd00129 | 80 | PAN_APPLE PAN/APPLE-like domain; present in N-term | 99.08 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.06 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.05 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.01 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 98.95 | |
| cd01098 | 84 | PAN_AP_plant Plant PAN/APPLE-like domain; present | 98.95 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 98.91 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 98.84 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.49 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 98.46 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 98.46 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 98.41 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 98.4 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 98.37 | |
| smart00108 | 114 | B_lectin Bulb-type mannose-specific lectin. | 98.29 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 98.25 | |
| cd00028 | 116 | B_lectin Bulb-type mannose-specific lectin. The do | 98.23 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 98.17 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 98.16 | |
| PF11883 | 48 | DUF3403: Domain of unknown function (DUF3403); Int | 98.14 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 98.11 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 98.07 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 98.04 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 97.99 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 97.94 | |
| smart00473 | 78 | PAN_AP divergent subfamily of APPLE domains. Apple | 97.84 | |
| smart00090 | 237 | RIO RIO-like kinase. | 97.73 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 97.69 | |
| PF01453 | 114 | B_lectin: D-mannose binding lectin; InterPro: IPR0 | 97.66 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 97.59 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 97.54 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 97.2 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 97.1 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 96.86 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 96.75 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 96.52 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 96.51 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 96.32 | |
| cd01100 | 73 | APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d | 96.14 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 95.94 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 95.77 | |
| KOG1093 | 725 | consensus Predicted protein kinase (contains TBC a | 95.35 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 94.73 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 94.12 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 92.99 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 91.32 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 89.52 | |
| PRK10593 | 297 | hypothetical protein; Provisional | 89.15 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 87.86 | |
| PF03109 | 119 | ABC1: ABC1 family; InterPro: IPR004147 This entry | 87.76 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 85.72 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 84.79 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 84.77 | |
| PRK09550 | 401 | mtnK methylthioribose kinase; Reviewed | 83.78 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 83.47 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 82.73 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 82.42 | |
| PF01102 | 122 | Glycophorin_A: Glycophorin A; InterPro: IPR001195 | 82.25 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 82.13 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 81.77 |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=355.07 Aligned_cols=234 Identities=45% Similarity=0.773 Sum_probs=203.6
Q ss_pred cccccCHHHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEE
Q 004345 481 DLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560 (760)
Q Consensus 481 ~~~~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~ 560 (760)
....|+++|+..||++|+..+.||+|+||.||+|.+++++.||||++.....+..++|.+|+.++.+++|||||+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999999999999998765433155699999999999999999999999
Q ss_pred EeCC-eeEEEEeccCCCChhhhh-------------------------------------------------------cc
Q 004345 561 VERE-ENMLIYEYMPNKSLDSFL-------------------------------------------------------FD 584 (760)
Q Consensus 561 ~~~~-~~~lV~Ey~~~gsL~~~L-------------------------------------------------------~D 584 (760)
.+.+ +++||||||++|+|+++| +|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9999 599999999999997763 39
Q ss_pred ccceeEecCCCccccccee-eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc
Q 004345 585 FGLARIFGGNQDQAATKRL-VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN 663 (760)
Q Consensus 585 FGla~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 663 (760)
||+|+........ .... .||.+|+|||++..+..+.|+|||||||+|+||+||+++.+.........+..|++..+.
T Consensus 221 FGLa~~~~~~~~~--~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 221 FGLAKLGPEGDTS--VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE 298 (361)
T ss_pred ccCcccCCccccc--eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence 9999765421111 1112 799999999999999999999999999999999999999886655556679999999999
Q ss_pred CCCcccccccccc-CCCCH-HHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 664 DNNVIDLVDPLIS-ESGFK-MEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 664 ~~~~~~~~d~~l~-~~~~~-~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
++++.+++|+.+. ..... .++.+++.++++|++.+|++||+|.||+++|+.+.
T Consensus 299 ~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 9999999999987 55554 68999999999999999999999999999996653
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=333.68 Aligned_cols=209 Identities=30% Similarity=0.457 Sum_probs=173.9
Q ss_pred hccccccccccccCCceeEEEEEec------CCcEEEEEEecccCcc-chHhHHHHHHHHhcCCCCccceeeeEEEeCCe
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKASGQ-GQEEFMNEVMVISNLQHRNLVRLLGCCVEREE 565 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~ 565 (760)
.+.+.+..+.||+|+||+||+|+.. +.+.||||.++..... .+++|.+|+++|+.++|||||+|+|+|.+++.
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 4455677799999999999999843 4567999999876544 78899999999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhh---------------------------------------------------------------
Q 004345 566 NMLIYEYMPNKSLDSFL--------------------------------------------------------------- 582 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L--------------------------------------------------------------- 582 (760)
.++|+|||..|+|.+||
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VK 643 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVK 643 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEE
Confidence 99999999999999985
Q ss_pred -ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHH
Q 004345 583 -FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWK 660 (760)
Q Consensus 583 -~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 660 (760)
+||||+|.+...+++.......-+++|||||.|..++||.+||||||||+|||+++ |+.|+.....++ +.+
T Consensus 644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E-------VIe 716 (774)
T KOG1026|consen 644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE-------VIE 716 (774)
T ss_pred ecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH-------HHH
Confidence 29999998877666665545566889999999999999999999999999999998 888986443321 223
Q ss_pred hccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 661 LWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 661 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
..+.+.+ -+.+.....++..||+.||+.+|++||+++||-.+|+....
T Consensus 717 ~i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 717 CIRAGQL---------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred HHHcCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 3334433 23344566788999999999999999999999999988653
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=315.63 Aligned_cols=210 Identities=27% Similarity=0.437 Sum_probs=168.9
Q ss_pred cccccccccccCCceeEEEEEec----CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ----DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
....+.++||.|.||.|++|+++ ....||||.|+... +..+.+|+.|+.||.+++||||++|.|+.......+||
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 44577899999999999999975 34579999998654 45567899999999999999999999999999999999
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc-
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ- 597 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~- 597 (760)
.|||+||+|+.|| +||||+|.+.++.+.
T Consensus 709 TEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ 788 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 788 (996)
T ss_pred hhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCcc
Confidence 9999999999985 399999988655422
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
..+..-.-+++|.|||.|..++++.+||||||||+|||.++ |.+|+-.... +++.+.+....+
T Consensus 789 ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN----------------QdVIkaIe~gyR 852 (996)
T KOG0196|consen 789 YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN----------------QDVIKAIEQGYR 852 (996)
T ss_pred ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch----------------HHHHHHHHhccC
Confidence 12222233679999999999999999999999999999887 9999743221 122222222223
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
-..+..+...+.+||+.|||.|-.+||++.||+.+|++++++..
T Consensus 853 LPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 853 LPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN 896 (996)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence 33445567788999999999999999999999999999876533
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=299.66 Aligned_cols=203 Identities=33% Similarity=0.519 Sum_probs=164.5
Q ss_pred ccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
.+.+.+.||+|.||.||+|.++....||||.++.. ....+.|.+|+++|++|+|+|||+++|+|..++..+||||||++
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence 34567899999999999999988889999999764 34567899999999999999999999999999999999999999
Q ss_pred CChhhhh----------------------------------------------------ccccceeEecCCCccccccee
Q 004345 576 KSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 576 gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
|+|.+|| +||||||.+..+.+. .....
T Consensus 286 GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~-~~~~~ 364 (468)
T KOG0197|consen 286 GSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT-ASEGG 364 (468)
T ss_pred CcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCcee-ecCCC
Confidence 9999985 399999965544433 33334
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 682 (760)
.-+..|.|||.+..++|+.|||||||||+||||+| |+.|++..... ++.+.++..-+-..+..
T Consensus 365 kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~----------------ev~~~le~GyRlp~P~~ 428 (468)
T KOG0197|consen 365 KFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE----------------EVLELLERGYRLPRPEG 428 (468)
T ss_pred CCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH----------------HHHHHHhccCcCCCCCC
Confidence 55789999999999999999999999999999999 88887532221 12222222222233444
Q ss_pred HHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 683 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
+...+.+||..||+.+|++|||+..+...|+...
T Consensus 429 CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 429 CPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred CCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 5677889999999999999999999999887764
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-32 Score=292.82 Aligned_cols=207 Identities=29% Similarity=0.439 Sum_probs=160.7
Q ss_pred ccccccccCCceeEEEEEecCCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeCC-eeEEEEeccC
Q 004345 498 QLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVERE-ENMLIYEYMP 574 (760)
Q Consensus 498 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~-~~~lV~Ey~~ 574 (760)
.+.+.||+|+||+||+|.+.....||||++..... ...++|.+|+.+|.+++|||||+++|+|.+.. ..+||||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 34467999999999999997555599999975432 22669999999999999999999999999988 7999999999
Q ss_pred CCChhhhh------------------------------------------------------ccccceeEecCCCccccc
Q 004345 575 NKSLDSFL------------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 575 ~gsL~~~L------------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+|+|..+| +|||+++...... ...
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~~ 201 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--TSM 201 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc--ccc
Confidence 99998874 3999998764322 223
Q ss_pred ceeeeeccccCccccc--cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 601 KRLVGTYGYMSPEYAM--EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~--~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
....||+.|||||++. ...|+.|+|||||||+||||+||+.||..... ...+......+. ...
T Consensus 202 ~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~------~~~~~~v~~~~~---------Rp~ 266 (362)
T KOG0192|consen 202 TSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP------VQVASAVVVGGL---------RPP 266 (362)
T ss_pred cCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhcCC---------CCC
Confidence 3368999999999999 56999999999999999999999999964332 111111111111 111
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCCC
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPA 721 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~~ 721 (760)
.+......+..++.+||+.||+.||++.+|+.+|+.+......
T Consensus 267 ~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 267 IPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 1222445677888899999999999999999999987654443
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-31 Score=281.52 Aligned_cols=214 Identities=27% Similarity=0.435 Sum_probs=174.2
Q ss_pred hccccccccccccCCceeEEEEEecCCcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
+...+.+.++||+|.||.|.++....+..||||+++.... ..+.+|.+|+++|.+++|||||+|+|+|..++.+++|+|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 4566788899999999999999998889999999987644 445899999999999999999999999999999999999
Q ss_pred ccCCCChhhhh----------------------------------------------------ccccceeEecCCCcccc
Q 004345 572 YMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 572 y~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
||++|+|.+|| +|||++|-+.....+..
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 99999999884 49999998877777777
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS--GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
....+-+++|||||.+..++++.++|||+|||+|||+++ ..+|+....++. .++.+...+..+.....+
T Consensus 696 qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~~~~~~~~~~~~~l------ 766 (807)
T KOG1094|consen 696 QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENAGEFFRDQGRQVVL------ 766 (807)
T ss_pred ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhhhhhcCCCCcceec------
Confidence 777788999999999999999999999999999999875 677876444332 222222333322221111
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
..+......+.+++++||..+.++||+++++...|++.
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11233446678999999999999999999999998764
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=309.20 Aligned_cols=208 Identities=32% Similarity=0.483 Sum_probs=165.4
Q ss_pred ccccccccccccCCceeEEEEEecC--C----cEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQD--G----QEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~----~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 566 (760)
..+.++.+.||+|.||.||+|.+.+ + ..||||.+++. +.+...+|++|..+|++++|||||+++|+|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 3455777899999999999999642 3 34999999865 446677999999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhh---------------------------------------------------------cccccee
Q 004345 567 MLIYEYMPNKSLDSFL---------------------------------------------------------FDFGLAR 589 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L---------------------------------------------------------~DFGla~ 589 (760)
+|++|||++|+|..|| +||||||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr 850 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLAR 850 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhH
Confidence 9999999999999885 3999999
Q ss_pred EecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcc
Q 004345 590 IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVI 668 (760)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (760)
.+...+.+.......-+.+|||||.+..+.|+.|+|||||||+|||++| |..||......+ ... .....+
T Consensus 851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~---v~~---~~~~gg--- 921 (1025)
T KOG1095|consen 851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE---VLL---DVLEGG--- 921 (1025)
T ss_pred hhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH---HHH---HHHhCC---
Confidence 7665555544444455679999999999999999999999999999999 788886433221 111 111222
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 669 DLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 669 ~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
+| +.+..+...+.++|..||+.+|++||++..|++.+..+..
T Consensus 922 -----RL--~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 922 -----RL--DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred -----cc--CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 11 1233455678899999999999999999999998877653
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=265.06 Aligned_cols=150 Identities=30% Similarity=0.608 Sum_probs=133.3
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
..+|.+.+.||+|+|++||+|+++ ++..||||.+.+. ....++.+..|+++|+.++|||||+|++++..++..+|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 356788889999999999999964 6789999999765 4556777899999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------------ccccceeEecCC
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------------FDFGLARIFGGN 594 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------------~DFGla~~~~~~ 594 (760)
|||.+|+|..|| +|||+||.+...
T Consensus 89 EyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~ 168 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG 168 (429)
T ss_pred EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence 999999999984 399999987533
Q ss_pred CcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 004345 595 QDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFY 646 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~ 646 (760)
......+|++-|||||+++..+|+.|+|+||.|++|||+++|+.||+..
T Consensus 169 ---~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 169 ---SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred ---hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 2334589999999999999999999999999999999999999999743
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-30 Score=277.32 Aligned_cols=197 Identities=23% Similarity=0.350 Sum_probs=159.3
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
.+|...+.||+|+|+.+|+++. ..|+.||+|++.+. .....+...+|++|.++|+|||||+++++|++.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688899999999999999996 88999999999764 3455678999999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|+|++++|..++ .|||||..+....+ ..
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E--rk 175 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE--RK 175 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCccc--cc
Confidence 999999998762 49999998864432 34
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...+||+.|+|||++....++..+||||+||+||-|+.|++||+...-.+ ....++.. +. ..+
T Consensus 176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke-------ty~~Ik~~---~Y-------~~P 238 (592)
T KOG0575|consen 176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE-------TYNKIKLN---EY-------SMP 238 (592)
T ss_pred ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH-------HHHHHHhc---Cc-------ccc
Confidence 46899999999999999999999999999999999999999996321111 11111110 10 111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..-.....+|+...|+.||.+|||+++|+.
T Consensus 239 ~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 239 SHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred cccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 122345667788899999999999999987
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-30 Score=275.77 Aligned_cols=211 Identities=28% Similarity=0.421 Sum_probs=168.1
Q ss_pred HHHHHhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCee
Q 004345 488 EELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 488 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 566 (760)
++++....+....++||-|.||.||.|.++ -.-.||||.++.. .-..++|++|+.+|+.++|||+|+|+|+|..+...
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 334444444556689999999999999976 3568999999754 45678999999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhh----------------------------------------------------ccccceeEecCC
Q 004345 567 MLIYEYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGN 594 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~ 594 (760)
|||+|||.+|+|.+|| +||||++++..+
T Consensus 339 YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD 418 (1157)
T ss_pred EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCC
Confidence 9999999999999985 399999998755
Q ss_pred CcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 595 QDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
.+.. .....-++.|.|||.+..+.++.|+|||+|||+||||.| |..|+....- ..++.++..+
T Consensus 419 TYTA-HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl-------SqVY~LLEkg-------- 482 (1157)
T KOG4278|consen 419 TYTA-HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-------SQVYGLLEKG-------- 482 (1157)
T ss_pred ceec-ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-------HHHHHHHhcc--------
Confidence 4433 233455789999999999999999999999999999998 8888763221 2222222222
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.+-+.+..+.+.+.+||+.||+++|.+||++.|+.+.++.++
T Consensus 483 -yRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 483 -YRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred -ccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 222234445678899999999999999999999999988644
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=258.61 Aligned_cols=200 Identities=26% Similarity=0.369 Sum_probs=156.5
Q ss_pred ccccccccCCceeEEEEEec-CCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCC-eeEEEEeccC
Q 004345 498 QLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE-ENMLIYEYMP 574 (760)
Q Consensus 498 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~-~~~lV~Ey~~ 574 (760)
+..+.||+|..|+|||++++ +++.+|+|.+... ....++++.+|++++++.+||+||+++|.|..+. +..|+||||.
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD 161 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD 161 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence 34589999999999999975 6889999999543 3455678999999999999999999999999999 5999999999
Q ss_pred CCChhhh---------------------------------------------------hccccceeEecCCCccccccee
Q 004345 575 NKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 575 ~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~~~~~ 603 (760)
+|||+.+ |+|||.++.+.+. ..+..
T Consensus 162 gGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS----~a~tf 237 (364)
T KOG0581|consen 162 GGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS----IANTF 237 (364)
T ss_pred CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh----hcccc
Confidence 9999886 2599999987433 34567
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
+||..|||||.+.+..|+.++||||||++++|+.+|+.|+....+. .............+ -.|.+... ..
T Consensus 238 vGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~-~~~~~~Ll~~Iv~~------ppP~lP~~---~f 307 (364)
T KOG0581|consen 238 VGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP-YLDIFELLCAIVDE------PPPRLPEG---EF 307 (364)
T ss_pred cccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC-CCCHHHHHHHHhcC------CCCCCCcc---cC
Confidence 9999999999999999999999999999999999999998754111 11111111111110 01222222 23
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..++.+++-.|++.||.+||+++|+++.
T Consensus 308 S~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 308 SPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 4567778889999999999999999873
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-31 Score=257.20 Aligned_cols=204 Identities=27% Similarity=0.436 Sum_probs=159.0
Q ss_pred cccccccccccCCceeEEEEE-ecCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeee-EEEeCCe-eEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLG-CCVEREE-NMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g-~~~~~~~-~~lV 569 (760)
.+|++.++||+|.||.|||+. +.+|..||.|.++-. +.+.++....|+.+|++|+|||||++++ .+.++.+ .+||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 457888999999999999998 678999999998732 4455678999999999999999999999 5666666 7999
Q ss_pred EeccCCCChhhhh----------------------------------------------------------ccccceeEe
Q 004345 570 YEYMPNKSLDSFL----------------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 570 ~Ey~~~gsL~~~L----------------------------------------------------------~DFGla~~~ 591 (760)
||||..|+|...| .||||+|.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 9999999998763 299999988
Q ss_pred cCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccc
Q 004345 592 GGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (760)
.... ......+||+.||+||.+....|+.||||||+||++|||+.-..||... ++.. ..+....++..
T Consensus 179 ~s~~--tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~-L~~KI~qgd~~--- 246 (375)
T KOG0591|consen 179 SSKT--TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLS-LCKKIEQGDYP--- 246 (375)
T ss_pred cchh--HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHH-HHHHHHcCCCC---
Confidence 5443 3345689999999999999999999999999999999999999998632 2221 11222223221
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
.+.+ ......+..|+..|+..||+.||+...+++.+...
T Consensus 247 --~~p~---~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~~ 285 (375)
T KOG0591|consen 247 --PLPD---EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQSE 285 (375)
T ss_pred --CCcH---HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHHH
Confidence 1111 23345667788899999999999976666666553
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-30 Score=262.58 Aligned_cols=201 Identities=22% Similarity=0.333 Sum_probs=154.6
Q ss_pred cccccccccccCCceeEEEEE-ecCCcEEEEEEecccCcc-------chHhHHHHHHHHhcCCCCccceeeeEEEeCCee
Q 004345 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQ-------GQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~-------~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 566 (760)
+.|.+.+.||+|+||.|-+|. .++++.||||++++.... ......+|+++|++|+|||||++++++...+..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 457778999999999999998 458999999999854211 122357999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhh-----------------------------------------------------ccccceeEecC
Q 004345 567 MLIYEYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~ 593 (760)
|+|||||.+|+|.+++ +|||+|+..+.
T Consensus 252 YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~ 331 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGE 331 (475)
T ss_pred EEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcccc
Confidence 9999999999998873 39999998752
Q ss_pred CCcccccceeeeeccccCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAMEGR---FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDL 670 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (760)
.......+||+.|.|||++.... +..|+|+||+||+||-+++|.+||.....+ ..+.+.+ ..++...
T Consensus 332 ---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~--~sl~eQI----~~G~y~f- 401 (475)
T KOG0615|consen 332 ---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD--PSLKEQI----LKGRYAF- 401 (475)
T ss_pred ---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC--ccHHHHH----hcCcccc-
Confidence 23456789999999999998654 334889999999999999999999743221 1122211 1111110
Q ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 671 VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 671 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.......-.++.++++-++|..||++|||++|+++
T Consensus 402 -----~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 402 -----GPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred -----cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 00111223467888999999999999999999986
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-28 Score=297.46 Aligned_cols=225 Identities=24% Similarity=0.431 Sum_probs=168.7
Q ss_pred cCHHHHHHhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeC
Q 004345 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER 563 (760)
Q Consensus 485 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~ 563 (760)
++++++. ..+...+.||+|+||.||+|+. .+++.||||+++.... ...+|++++++++|||||+++|+|.++
T Consensus 683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~ 755 (968)
T PLN00113 683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSE 755 (968)
T ss_pred hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcC
Confidence 4445544 3466778999999999999996 5789999999864332 223568899999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhhccc-------------------------cce-------eEecCCC-----------ccccc
Q 004345 564 EENMLIYEYMPNKSLDSFLFDF-------------------------GLA-------RIFGGNQ-----------DQAAT 600 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L~DF-------------------------Gla-------~~~~~~~-----------~~~~~ 600 (760)
+..++|||||++|+|.++|..+ ++. .++-... .....
T Consensus 756 ~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 835 (968)
T PLN00113 756 KGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTD 835 (968)
T ss_pred CCCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccC
Confidence 9999999999999998875311 110 0000000 00011
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC--
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES-- 678 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-- 678 (760)
....+|+.|||||++....++.|+|||||||++|||+||+.|++.... .......|+............+|+.+...
T Consensus 836 ~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (968)
T PLN00113 836 TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMWIDPSIRGDVS 914 (968)
T ss_pred CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhheeCccccCCCC
Confidence 123467899999999999999999999999999999999999854322 23456667666555555666677766432
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
....+..++.+++.+||+.||++||||.||+++|++..+
T Consensus 915 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 915 VNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 345677889999999999999999999999999988754
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-29 Score=272.36 Aligned_cols=214 Identities=32% Similarity=0.395 Sum_probs=159.1
Q ss_pred HHHhccccccccccccCCceeEEEEEecC--C--cE-EEEEEecc---cCccchHhHHHHHHHHhcCCCCccceeeeEEE
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGKLQD--G--QE-IAVKRLSK---ASGQGQEEFMNEVMVISNLQHRNLVRLLGCCV 561 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~--~--~~-vavK~l~~---~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~ 561 (760)
++...++..+.++||+|+||.||+|++.. + .. ||||..+. .......+|++|+++|.+++|||||+++|++.
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 33344555666999999999999999653 2 23 89999874 23556779999999999999999999999999
Q ss_pred eCCeeEEEEeccCCCChhhhh---------------------------------------------------ccccceeE
Q 004345 562 EREENMLIYEYMPNKSLDSFL---------------------------------------------------FDFGLARI 590 (760)
Q Consensus 562 ~~~~~~lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~ 590 (760)
.+.+.+||||+|+||+|.++| +||||++.
T Consensus 232 ~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 232 LEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred CCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence 999999999999999999985 49999875
Q ss_pred ecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccc
Q 004345 591 FGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVID 669 (760)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (760)
-. ..........-+.+|+|||.+....|+.|+|||||||++||+++ |..|+...... ....++ ...+.
T Consensus 312 ~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~---~v~~kI---~~~~~--- 380 (474)
T KOG0194|consen 312 GS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY---EVKAKI---VKNGY--- 380 (474)
T ss_pred Cc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH---HHHHHH---HhcCc---
Confidence 32 11111111235689999999999999999999999999999999 78887633221 111111 01111
Q ss_pred cccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 670 LVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 670 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
.-..+......+..++..||+.+|++||+|.+|.+.|+.+.....
T Consensus 381 ------r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 381 ------RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ------cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 111112233455667779999999999999999999988765433
|
|
| >PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-29 Score=225.89 Aligned_cols=111 Identities=47% Similarity=0.694 Sum_probs=80.8
Q ss_pred CCcEEEEccCCCCCCCC--CcEEEEecCccEEEEcCCCCEEEec-CCCCCcCCCCceEEEecCCCEEEEeCCCCceeeee
Q 004345 73 NKTVVWVANRNKPLIDS--SGIFTISEDGNLVVLNGKKQVHWSS-NVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDS 149 (760)
Q Consensus 73 ~~tvVW~ANr~~pv~~~--~~~l~l~~~G~L~l~d~~~~~vWst-~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQS 149 (760)
++||||+|||+.|+..+ .++|.|+.||+|+|.|++++++|++ ++.+.. ..+..|.|+|+|||||+|. ++.+||||
T Consensus 1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~-~~~~~~~L~~~GNlvl~d~-~~~~lW~S 78 (114)
T PF01453_consen 1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRG-NSGCYLVLQDDGNLVLYDS-SGNVLWQS 78 (114)
T ss_dssp ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS--SSEEEEEETTSEEEEEET-TSEEEEES
T ss_pred CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCcc-ccCeEEEEeCCCCEEEEee-cceEEEee
Confidence 36999999999999643 4889999999999999999999999 544322 1468999999999999997 67899999
Q ss_pred cCCCcccccCCCcccccccCCccEEEEeecCCCCCC
Q 004345 150 FQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPS 185 (760)
Q Consensus 150 Fd~PTDTlLpg~~l~~~~~~g~~~~L~S~~s~~dps 185 (760)
|||||||+||+|+|+.+..+|.+..++||++.+|||
T Consensus 79 f~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps 114 (114)
T PF01453_consen 79 FDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS 114 (114)
T ss_dssp TTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred cCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence 999999999999999987777667799999999997
|
Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B .... |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-29 Score=263.97 Aligned_cols=200 Identities=23% Similarity=0.398 Sum_probs=156.4
Q ss_pred cccCHHHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEe
Q 004345 483 LVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE 562 (760)
Q Consensus 483 ~~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~ 562 (760)
..+.|++|. .++-||.|+.|.||+|+++ ++.||||+++... ..+|+-|++|+||||+.+.|+|..
T Consensus 119 WeiPFe~Is-------ELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtq 183 (904)
T KOG4721|consen 119 WEIPFEEIS-------ELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQ 183 (904)
T ss_pred ccCCHHHhh-------hhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecC
Confidence 345566553 3578999999999999996 5899999885332 257888999999999999999999
Q ss_pred CCeeEEEEeccCCCChhhhh--------------------------------------------------ccccceeEec
Q 004345 563 REENMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFG 592 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~ 592 (760)
...+|||||||+.|-|...| +|||.++...
T Consensus 184 sPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~ 263 (904)
T KOG4721|consen 184 SPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELS 263 (904)
T ss_pred CceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhh
Confidence 99999999999999998763 4999998764
Q ss_pred CCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
.. ......+||..|||||+|++.+.++|+|||||||+||||+||..|+...... -+ .|.-+ .
T Consensus 264 ~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss----AI-----IwGVG------s 325 (904)
T KOG4721|consen 264 DK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS----AI-----IWGVG------S 325 (904)
T ss_pred hh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh----ee-----EEecc------C
Confidence 33 2334579999999999999999999999999999999999999998532211 00 11100 1
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
..|.-..+....+-+.-|+..||+..|..||++.+|+..|+=.
T Consensus 326 NsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 326 NSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred CcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 1223333444556677788899999999999999999999543
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=261.65 Aligned_cols=205 Identities=28% Similarity=0.424 Sum_probs=162.8
Q ss_pred ccccccccccccCCceeEEEEEecC---C--cEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQD---G--QEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~--~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
.+...+.+.||.|.||.||+|.+.+ | -.||||..+.. .....+.|+.|+.+|++++|||||+|+|+|.+ ...+
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~W 466 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMW 466 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-ccee
Confidence 3445566889999999999999543 2 35999999863 55668899999999999999999999999976 5789
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCc
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~ 596 (760)
||||.++-|.|.+|| +||||+|.+.....
T Consensus 467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~y 546 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAY 546 (974)
T ss_pred EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccch
Confidence 999999999998884 39999998876555
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
+... ...-++.|||||.+..++++.+||||.|||.+||++. |.+||..... .++.-.+...-
T Consensus 547 YkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN----------------sDVI~~iEnGe 609 (974)
T KOG4257|consen 547 YKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN----------------SDVIGHIENGE 609 (974)
T ss_pred hhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc----------------cceEEEecCCC
Confidence 4443 4455789999999999999999999999999999987 9999864322 12222222222
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
+...++.+...+..++.+||+.+|.+||.+.++...|..+.
T Consensus 610 RlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 610 RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred CCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 23345556678889999999999999999999998887643
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=254.26 Aligned_cols=198 Identities=23% Similarity=0.342 Sum_probs=158.7
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
..|...+.||+|.||.||||.. ..++.||+|++.-. .....++..+|+.++.+++|+||.+++|.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 3466678999999999999995 57889999999754 345567899999999999999999999999999999999999
Q ss_pred cCCCChhhhh--------------------------------------------------ccccceeEecCCCcccccce
Q 004345 573 MPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 573 ~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
|.+|++.+.| +|||.+..+.... .....
T Consensus 93 ~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~--~rr~t 170 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV--KRRKT 170 (467)
T ss_pred hcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechh--hcccc
Confidence 9999987763 4999998775433 33367
Q ss_pred eeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHH
Q 004345 603 LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 682 (760)
.+||+.|||||++....|+.|+||||+|++.+||.+|.+|+...++..-..++ .+-..|.+.+.
T Consensus 171 fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI------------pk~~PP~L~~~---- 234 (467)
T KOG0201|consen 171 FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI------------PKSAPPRLDGD---- 234 (467)
T ss_pred ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec------------cCCCCCccccc----
Confidence 89999999999999889999999999999999999999998755442111111 01112333332
Q ss_pred HHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 683 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+.+++..|++.||+.||++.++++
T Consensus 235 ~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 235 FSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred cCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 2244667888999999999999999987
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-28 Score=259.64 Aligned_cols=219 Identities=25% Similarity=0.383 Sum_probs=166.5
Q ss_pred CHHHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeC
Q 004345 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER 563 (760)
Q Consensus 486 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~ 563 (760)
+.+++.+..+.+.+.+.||+|+||+||+|++. ..||||+++.. ..+..+.|++|+.++++-+|.||+-+.|+|...
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 34666777777788899999999999999985 57999999754 345677899999999999999999999999987
Q ss_pred CeeEEEEeccCCCChhhhh---------------------------------------------------ccccceeEec
Q 004345 564 EENMLIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFG 592 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~ 592 (760)
.. .||+.+|++.+|+.+| .||||+..-.
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred ce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence 77 9999999999999885 2999987543
Q ss_pred CCCcccccceeeeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccc
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVID 669 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (760)
.-..........|...|||||+++ ..+|++.+||||||+++|||+||..|+.....+.. .|.-++-.-
T Consensus 540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI---------ifmVGrG~l 610 (678)
T KOG0193|consen 540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI---------IFMVGRGYL 610 (678)
T ss_pred eeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe---------EEEeccccc
Confidence 221112223346788999999997 35699999999999999999999999973322211 111122212
Q ss_pred cccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCC
Q 004345 670 LVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDL 719 (760)
Q Consensus 670 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~ 719 (760)
+.|.... .....+.+.+|+..||..++++||.+.+|+.+|++++..+
T Consensus 611 ~pd~s~~---~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 611 MPDLSKI---RSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL 657 (678)
T ss_pred Cccchhh---hccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence 2222211 1223456777888999999999999999999998876543
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-28 Score=261.56 Aligned_cols=210 Identities=27% Similarity=0.427 Sum_probs=155.5
Q ss_pred hccccccccccccCCceeEEEEEe------cCCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCC
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVERE 564 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~ 564 (760)
+.++|++.++||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++.++ +||||++++++|...+
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 456799999999999999999974 235679999997543 23356799999999999 8999999999987654
Q ss_pred -eeEEEEeccCCCChhhh--------------------------------------------------------------
Q 004345 565 -ENMLIYEYMPNKSLDSF-------------------------------------------------------------- 581 (760)
Q Consensus 565 -~~~lV~Ey~~~gsL~~~-------------------------------------------------------------- 581 (760)
..++||||+++|+|.++
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 57899999999998421
Q ss_pred --------------------------------------------------hccccceeEecCCCcccccceeeeeccccC
Q 004345 582 --------------------------------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMS 611 (760)
Q Consensus 582 --------------------------------------------------L~DFGla~~~~~~~~~~~~~~~~gt~~y~a 611 (760)
|+|||+++.+.............+++.|||
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 244 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA 244 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence 249999886543322222233456788999
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHH
Q 004345 612 PEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNV 690 (760)
Q Consensus 612 PE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l 690 (760)
||++....++.++|||||||+||||++ |..||....... . .......+... .. +......+.++
T Consensus 245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~----~~~~~~~~~~~-----~~----~~~~~~~l~~l 309 (338)
T cd05102 245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--E----FCQRLKDGTRM-----RA----PENATPEIYRI 309 (338)
T ss_pred cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--H----HHHHHhcCCCC-----CC----CCCCCHHHHHH
Confidence 999999999999999999999999997 999986432211 0 11111111111 00 11123457789
Q ss_pred HHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 691 GLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 691 ~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
+.+||+.||++|||+.||+++|++++.
T Consensus 310 i~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 310 MLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=246.36 Aligned_cols=214 Identities=26% Similarity=0.358 Sum_probs=157.7
Q ss_pred cccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHh--cCCCCccceeeeEEEeCC----eeEEEE
Q 004345 497 FQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVIS--NLQHRNLVRLLGCCVERE----ENMLIY 570 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~--~l~H~nIv~l~g~~~~~~----~~~lV~ 570 (760)
.++.++||+|+||.||||++. ++.||||++. .+..+.|.+|-.|.+ .++|+||++++++-.... +++||+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt 287 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT 287 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence 455689999999999999986 4999999995 345678888888876 468999999999977665 889999
Q ss_pred eccCCCChhhhh----------------------------------------------------------ccccceeEec
Q 004345 571 EYMPNKSLDSFL----------------------------------------------------------FDFGLARIFG 592 (760)
Q Consensus 571 Ey~~~gsL~~~L----------------------------------------------------------~DFGla~~~~ 592 (760)
||.++|+|.+|| +|||||..+.
T Consensus 288 ~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~ 367 (534)
T KOG3653|consen 288 EFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLE 367 (534)
T ss_pred eeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEec
Confidence 999999999985 3999999998
Q ss_pred CCCcccccceeeeeccccCccccccCC-CC-----ccchhHHHHHHHHHHHhCCCCCC-CCcccccccHH---------H
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAMEGR-FS-----EKSDVFSFGVLLLEIVSGRKNTS-FYHEEFELTLL---------G 656 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-----~ksDVwSfGv~l~ElltG~~p~~-~~~~~~~~~~~---------~ 656 (760)
...........+||.+|||||++.+.. +. .+.||||+|.+||||+++....+ ...++.+..+- +
T Consensus 368 p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e 447 (534)
T KOG3653|consen 368 PGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLE 447 (534)
T ss_pred CCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHH
Confidence 776666666789999999999987543 22 36899999999999999876543 11222222111 1
Q ss_pred HHHHhccCCCccccccccccCC-CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 657 YAWKLWNDNNVIDLVDPLISES-GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 657 ~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
.++..... +...|.+... .....+..+.+.+..||+.||+.|.|+.-|-+++.++...
T Consensus 448 ~mq~~VV~----kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 448 EMQELVVR----KKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred HHHHHHHh----hccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 11111111 1111222111 0113456677889999999999999999999999887543
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=266.06 Aligned_cols=203 Identities=27% Similarity=0.405 Sum_probs=162.1
Q ss_pred cccccccCCceeEEEEEe-cCC----cEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 499 LANKLGQGGFGPVYKGKL-QDG----QEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 499 ~~~~lG~G~~g~Vy~~~~-~~~----~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
..++||+|+||+||||.+ +.+ -+||+|++... ..+...+|+.|+-+|++|+||||+||+|+|.... ..||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 358999999999999984 443 46999998754 3455679999999999999999999999998766 8899999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
||.|.|.+|+ .|||+|+.+..........
T Consensus 779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~ 858 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAP 858 (1177)
T ss_pred cccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccccccc
Confidence 9999999883 3999999987766655555
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...-.+.|||-|.++...|+.++|||||||++||++| |.+|++....++..+ .++.++ +-..+
T Consensus 859 ~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~d-------lle~ge---------RLsqP 922 (1177)
T KOG1025|consen 859 GGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPD-------LLEKGE---------RLSQP 922 (1177)
T ss_pred ccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhH-------HHhccc---------cCCCC
Confidence 5556789999999999999999999999999999998 888986433322211 111111 11233
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
+.....+..++++||..|+..||+++++...+.+..++
T Consensus 923 piCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 923 PICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred CCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 44567788899999999999999999999988876554
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.7e-28 Score=257.23 Aligned_cols=201 Identities=24% Similarity=0.403 Sum_probs=159.9
Q ss_pred ccccccccccccCCceeEEEEE-ecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
...|...++||+|+-|.||.+. ..+++.||||++........+-.++|+.+|+..+|+|||++++.+...+++|+||||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 3457777999999999999998 567889999999876656667789999999999999999999999999999999999
Q ss_pred cCCCChhhhh-------------------------------------------------ccccceeEecCCCccccccee
Q 004345 573 MPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 573 ~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
|++|+|-+.+ .|||++..+...+. .....
T Consensus 352 m~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~--KR~Tm 429 (550)
T KOG0578|consen 352 MEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS--KRSTM 429 (550)
T ss_pred cCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC--ccccc
Confidence 9999997752 39999988754443 45568
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
+||+.|||||++....|.+|.||||||++++||+-|.+||-...+-... +.....+ . +.+ .....-
T Consensus 430 VGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl------yLIa~ng-~-----P~l--k~~~kl 495 (550)
T KOG0578|consen 430 VGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATNG-T-----PKL--KNPEKL 495 (550)
T ss_pred cCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH------HHHhhcC-C-----CCc--CCcccc
Confidence 9999999999999999999999999999999999999998642221111 1111111 1 111 112222
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.++..+||+.|+++||++.|+++
T Consensus 496 S~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 496 SPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred CHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 345667778999999999999999987
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=249.72 Aligned_cols=208 Identities=18% Similarity=0.281 Sum_probs=153.9
Q ss_pred ccccCHHHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccc---hHhHHHHHHHHhcCCCCccceeee
Q 004345 482 LLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG---QEEFMNEVMVISNLQHRNLVRLLG 558 (760)
Q Consensus 482 ~~~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~---~~~f~~E~~~l~~l~H~nIv~l~g 558 (760)
+..++.+++.. .....||+|+++.||+|.. +++.||||+++...... .+.|.+|+.+|.+++|||||+++|
T Consensus 12 ~~~i~~~~i~~-----~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 12 IKCIESDDIDK-----YTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred ceecCHHHcCC-----CCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 34456666622 2236799999999999998 58899999997653322 467889999999999999999999
Q ss_pred EEEe----CCeeEEEEeccCCCChhhhh---------------------------------------------------c
Q 004345 559 CCVE----REENMLIYEYMPNKSLDSFL---------------------------------------------------F 583 (760)
Q Consensus 559 ~~~~----~~~~~lV~Ey~~~gsL~~~L---------------------------------------------------~ 583 (760)
++.+ ....++||||+++|+|.++| +
T Consensus 86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~ 165 (283)
T PHA02988 86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKII 165 (283)
T ss_pred eEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEc
Confidence 9977 34678999999999998764 2
Q ss_pred cccceeEecCCCcccccceeeeeccccCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHh
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME--GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL 661 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~ 661 (760)
|||+++.+... .....|+..|+|||++.. ..++.++|||||||++|||++|+.||...... .+....
T Consensus 166 dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~---~~~~~i--- 234 (283)
T PHA02988 166 CHGLEKILSSP-----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK---EIYDLI--- 234 (283)
T ss_pred ccchHhhhccc-----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH---HHHHHH---
Confidence 78877654321 113467899999999976 67999999999999999999999998643211 111111
Q ss_pred ccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 662 WNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 662 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
...+.. +.+ +......+.+++.+||+.||++|||+.||++.|+..
T Consensus 235 ~~~~~~-----~~~----~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 235 INKNNS-----LKL----PLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred HhcCCC-----CCC----CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 111100 011 111234577889999999999999999999999765
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-27 Score=245.17 Aligned_cols=192 Identities=22% Similarity=0.325 Sum_probs=150.2
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.++||+|+||+||.++. ++++.+|+|++++. .....+..++|..||.+++||.||+++-.|.+.+.+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 46789999999999999999985 56889999999865 234567789999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
+||+.||.|..+| +||||++..... ...
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~--~~~ 181 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD--GDA 181 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccC--CCc
Confidence 9999999998763 499999964322 234
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
+...+||+.|||||++....|+..+|.||+||++|||++|.+||...+.. .+.... ..+++ ....
T Consensus 182 t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~------~~~~~I-~~~k~------~~~p-- 246 (357)
T KOG0598|consen 182 TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK------KMYDKI-LKGKL------PLPP-- 246 (357)
T ss_pred cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH------HHHHHH-hcCcC------CCCC--
Confidence 55689999999999999999999999999999999999999999643221 111111 11110 0001
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCC
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRP 703 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RP 703 (760)
..-..+..+++...++.||++|.
T Consensus 247 -~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 247 -GYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -ccCCHHHHHHHHHHhccCHHHhc
Confidence 11123455667788889999996
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9e-28 Score=237.99 Aligned_cols=214 Identities=21% Similarity=0.353 Sum_probs=158.6
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
+.|+.+.++|+|+||.|||++.+ +|+.||||++..... .-.+-.++|+++|++++|+|+|.|+.+|......+||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 45777899999999999999965 699999999975432 234568999999999999999999999999999999999
Q ss_pred ccCCCChhhh--------------------------------------------------hccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
||..--|+++ |+|||+|+.+... ....+
T Consensus 82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p--gd~YT 159 (396)
T KOG0593|consen 82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP--GDNYT 159 (396)
T ss_pred ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC--cchhh
Confidence 9987655543 3699999988632 22334
Q ss_pred eeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH--------HHhccCCCccccc-
Q 004345 602 RLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA--------WKLWNDNNVIDLV- 671 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~- 671 (760)
..+.|..|.|||.+.+ .+|...+||||.||++.||++|.+-|+...+-++...+... .+.+.......-+
T Consensus 160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~ 239 (396)
T KOG0593|consen 160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR 239 (396)
T ss_pred hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence 5678999999999987 78999999999999999999999988755544433332211 1222222221111
Q ss_pred ccccc-----CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 672 DPLIS-----ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 672 d~~l~-----~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
-|... +...+.....+++++..|++.||.+|++.+|++.
T Consensus 240 lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 240 LPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 01110 1111122346789999999999999999999875
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-27 Score=260.12 Aligned_cols=210 Identities=26% Similarity=0.415 Sum_probs=155.0
Q ss_pred HHhccccccccccccCCceeEEEEEe------cCCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEe
Q 004345 491 ANATNNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562 (760)
Q Consensus 491 ~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~ 562 (760)
....++|++.++||+|+||.||+|+. .++..||||+++... ....+.+.+|+.++..+ +||||++++++|..
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 33456788999999999999999973 245689999997432 33456789999999999 89999999999999
Q ss_pred CCeeEEEEeccCCCChhhh-------------------------------------------------------------
Q 004345 563 REENMLIYEYMPNKSLDSF------------------------------------------------------------- 581 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~------------------------------------------------------------- 581 (760)
++..++||||+++|+|.++
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 9999999999999987432
Q ss_pred ----------------------------------------------------------------hccccceeEecCCCcc
Q 004345 582 ----------------------------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 582 ----------------------------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
|+|||+++........
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 1389988865433222
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......++..|+|||.+....++.++|||||||++|||++ |..|+....... .. .+....+.... .+
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~----~~~~~~~~~~~--~~--- 339 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KF----YKMIKEGYRML--SP--- 339 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HH----HHHHHhCccCC--CC---
Confidence 22222345678999999999999999999999999999998 788875332211 11 11111111000 00
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
.....++.+++.+||+.||++||+|.||+++|++.
T Consensus 340 ----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 ----ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ----CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 11124577899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=246.09 Aligned_cols=212 Identities=27% Similarity=0.424 Sum_probs=153.3
Q ss_pred ccccccccccccCCceeEEEEEecC-----------------CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccce
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQD-----------------GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVR 555 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~ 555 (760)
.++|++.++||+|+||.||++..++ +..||+|.+.... .....+|.+|++++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578888999999999999997532 3469999987542 334567999999999999999999
Q ss_pred eeeEEEeCCeeEEEEeccCCCChhhh------------------------------------------------------
Q 004345 556 LLGCCVEREENMLIYEYMPNKSLDSF------------------------------------------------------ 581 (760)
Q Consensus 556 l~g~~~~~~~~~lV~Ey~~~gsL~~~------------------------------------------------------ 581 (760)
+++++.+.+..++||||+++|+|.++
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~d 163 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRD 163 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 99999999999999999999988542
Q ss_pred ---------------hccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhC--CCCCC
Q 004345 582 ---------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG--RKNTS 644 (760)
Q Consensus 582 ---------------L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG--~~p~~ 644 (760)
|+|||+++.+.............++..|||||++..+.++.++||||||+++|||+++ ..|+.
T Consensus 164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 243 (304)
T cd05096 164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG 243 (304)
T ss_pred cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence 1399998865433222222334557899999999988999999999999999999975 44554
Q ss_pred CCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 645 FYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
..... .....+............. ..+......+.+++.+||+.||++||||.+|++.|++
T Consensus 244 ~~~~~---~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 244 ELTDE---QVIENAGEFFRDQGRQVYL------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred cCCHH---HHHHHHHHHhhhccccccc------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 32211 1222221111111100000 0011123567889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-27 Score=253.60 Aligned_cols=213 Identities=25% Similarity=0.365 Sum_probs=163.1
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|.+.+.||+|.||.||||+- .+.+.||+|.+.+.. .++.+.+.+|++|+++++|||||.+++.|+...+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 5788899999999999999984 468899999997643 3455679999999999999999999999999999999999
Q ss_pred ccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
|+.+ +|..+| +|||+||....+ .....
T Consensus 82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~--t~vlt 158 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN--TSVLT 158 (808)
T ss_pred hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC--ceeee
Confidence 9987 887763 499999987543 23445
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
.+.||+.|||||...+.+|+..+|.||+||+|||+.+|++||... .+...+..... |+.. .+.
T Consensus 159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~------si~~Lv~~I~~--------d~v~---~p~ 221 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR------SITQLVKSILK--------DPVK---PPS 221 (808)
T ss_pred eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH------HHHHHHHHHhc--------CCCC---Ccc
Confidence 688999999999999999999999999999999999999998521 11111111111 1111 112
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHH--HHhccccCCCCCCCCce
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVS--MLNSEIKDLPAAKQPAF 727 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~--~L~~~~~~~~~p~~p~~ 727 (760)
.....+..+..-.++.||..|.|-.+++. ..++.+.....|..|++
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~~~~~~~~~a~ 269 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKINIAELPAQVAF 269 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhhhhcccccccc
Confidence 33456677777889999999999999876 23443333444555544
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=239.53 Aligned_cols=211 Identities=21% Similarity=0.314 Sum_probs=157.6
Q ss_pred hccccccccccccCCceeEEEEE-ecCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
..+.|++.++||.|.-+.||+|+ .+.++.||||+++-.. ....+.+.+|+..|+.++||||++++-.|..++.+|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 34678999999999999999999 5678999999997543 233688999999999999999999999999999999999
Q ss_pred eccCCCChhhhh----------------------------------------------------ccccceeEecCCC-cc
Q 004345 571 EYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQ-DQ 597 (760)
Q Consensus 571 Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~-~~ 597 (760)
.||.+||+.+.| +|||.+..+.... ..
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~ 183 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQ 183 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCcee
Confidence 999999998763 3999876553322 22
Q ss_pred ccc-ceeeeeccccCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 598 AAT-KRLVGTYGYMSPEYAMEG--RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 598 ~~~-~~~~gt~~y~aPE~~~~~--~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
... +..+||+.|||||+++.. .|+.|+|||||||+..||.+|..||....+-.- ....+. +......-..
T Consensus 184 ~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv------Ll~tLq-n~pp~~~t~~ 256 (516)
T KOG0582|consen 184 VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV------LLLTLQ-NDPPTLLTSG 256 (516)
T ss_pred eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH------HHHHhc-CCCCCccccc
Confidence 222 567899999999996543 499999999999999999999999975443210 111111 1111000111
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+..+....--..+.+++..|++.||.+|||++++++
T Consensus 257 ~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 257 LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 111111222346778888999999999999999986
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=246.24 Aligned_cols=198 Identities=32% Similarity=0.568 Sum_probs=143.9
Q ss_pred cccccccCCceeEEEEEec-----CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 499 LANKLGQGGFGPVYKGKLQ-----DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 499 ~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+.+.||.|.||.||+|.+. .+..|+||.++... ....+.|.+|++.+++++||||++++|+|...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4589999999999999976 35689999996533 23468899999999999999999999999988889999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+++|+|.++| +|||+++...........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~ 162 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKND 162 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEES
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999998764 388888776322222222
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
........|+|||.+....++.++||||||+++|||++ |+.|+...... .+.... .++.....
T Consensus 163 ~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~---~~~~~~----~~~~~~~~--------- 226 (259)
T PF07714_consen 163 SSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE---EIIEKL----KQGQRLPI--------- 226 (259)
T ss_dssp TTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH---HHHHHH----HTTEETTS---------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc---cccccc----ccccccee---------
Confidence 33456789999999999999999999999999999999 67787533211 111111 11111111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 712 (760)
+......+.+++..||+.+|++||||.+|++.|
T Consensus 227 ~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 227 PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp BTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 111234577899999999999999999999976
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.3e-27 Score=256.70 Aligned_cols=210 Identities=26% Similarity=0.441 Sum_probs=155.2
Q ss_pred HhccccccccccccCCceeEEEEEe------cCCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEeC
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVER 563 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~ 563 (760)
...++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+.+++.+ +|+|||+++++|...
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 3445788999999999999999873 234579999997542 33456789999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChhhh--------------------------------------------------------------
Q 004345 564 EENMLIYEYMPNKSLDSF-------------------------------------------------------------- 581 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~-------------------------------------------------------------- 581 (760)
+..++||||+++|+|.++
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 999999999999987542
Q ss_pred ----------------------------------------------------------hccccceeEecCCCccccccee
Q 004345 582 ----------------------------------------------------------LFDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 582 ----------------------------------------------------------L~DFGla~~~~~~~~~~~~~~~ 603 (760)
|+|||+++.+............
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 1389998765433222122223
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 682 (760)
.++..|||||++....++.++|||||||++|||++ |+.||....... .. ......+. .. .... .
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--~~----~~~~~~~~--~~---~~~~----~ 339 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--KF----YKMVKRGY--QM---SRPD----F 339 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--HH----HHHHHccc--Cc---cCCC----C
Confidence 45678999999998999999999999999999997 999986432211 11 11111110 00 0000 1
Q ss_pred HHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 683 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
....+.+++.+||+.||++|||+.+|+++|++++
T Consensus 340 ~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 340 APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 1246778889999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=255.20 Aligned_cols=212 Identities=24% Similarity=0.378 Sum_probs=157.7
Q ss_pred HHHhccccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcCC-CCccceeeeEEE
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQ-HRNLVRLLGCCV 561 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~ 561 (760)
+....++|++.+.||+|+||.||+|+.. ....||||++.... ....+.|++|++++++++ |||||+++++|.
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~ 111 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT 111 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence 3344678999999999999999999852 23469999997543 233567999999999996 999999999999
Q ss_pred eCCeeEEEEeccCCCChhhh------------------------------------------------------------
Q 004345 562 EREENMLIYEYMPNKSLDSF------------------------------------------------------------ 581 (760)
Q Consensus 562 ~~~~~~lV~Ey~~~gsL~~~------------------------------------------------------------ 581 (760)
+.+..+|||||+++|+|.++
T Consensus 112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (400)
T cd05105 112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM 191 (400)
T ss_pred cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence 99999999999999988532
Q ss_pred --------------------------------------------------------------------------------
Q 004345 582 -------------------------------------------------------------------------------- 581 (760)
Q Consensus 582 -------------------------------------------------------------------------------- 581 (760)
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~ 271 (400)
T cd05105 192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe
Confidence
Q ss_pred ------hccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccH
Q 004345 582 ------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTL 654 (760)
Q Consensus 582 ------L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~ 654 (760)
|+|||+++.+.............++..|||||.+....++.++|||||||++|||++ |..|+.....+. .
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~--~- 348 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS--T- 348 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH--H-
Confidence 138888876543322222233456788999999999999999999999999999997 888876322111 0
Q ss_pred HHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 655 LGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 655 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.......+... ..+......+.+++.+||+.+|++||++.+|+++|++++
T Consensus 349 ---~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 349 ---FYNKIKSGYRM---------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred ---HHHHHhcCCCC---------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 11111111100 011122356788999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=242.38 Aligned_cols=204 Identities=29% Similarity=0.531 Sum_probs=155.0
Q ss_pred cccccccccccCCceeEEEEEecC------CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQD------GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
++|++.+.||+|+||.||+|.... .+.||+|.+.... .....+|.+|+.++.+++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467888999999999999998542 2579999987443 234567999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhh-----------------------------------------------------------------
Q 004345 568 LIYEYMPNKSLDSFL----------------------------------------------------------------- 582 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L----------------------------------------------------------------- 582 (760)
++|||+++++|.++|
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~ 164 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVK 164 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEE
Confidence 999999999986432
Q ss_pred -ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHH
Q 004345 583 -FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWK 660 (760)
Q Consensus 583 -~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 660 (760)
+|||+++...............+++.|+|||.+....++.++|||||||++|||++ |..||...... .+. .
T Consensus 165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~---~~~----~ 237 (283)
T cd05048 165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ---EVI----E 237 (283)
T ss_pred ECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHH----H
Confidence 38999886543322222333456789999999998999999999999999999998 99998633221 111 1
Q ss_pred hccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 661 LWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 661 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
.+..+... ..+......+.+++.+||+.||.+||++.||+++|++
T Consensus 238 ~i~~~~~~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 238 MIRSRQLL---------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHcCCcC---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11111111 1112233668889999999999999999999999965
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-26 Score=240.92 Aligned_cols=203 Identities=27% Similarity=0.482 Sum_probs=154.3
Q ss_pred cccccccccccCCceeEEEEEec------CCcEEEEEEecccCcc-chHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKASGQ-GQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
++|.+.+.||+|+||.||+|... +++.||||.++..... ..+.|.+|++++++++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 45788899999999999999863 3478999999765433 4578999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhh----------------------------------------------------------------c
Q 004345 568 LIYEYMPNKSLDSFL----------------------------------------------------------------F 583 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L----------------------------------------------------------------~ 583 (760)
+||||+++++|.++| +
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~ 164 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIG 164 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEEC
Confidence 999999999886542 3
Q ss_pred cccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhc
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLW 662 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 662 (760)
|||+++...............+++.|+|||.+....++.++|||||||++|||++ |+.|+...... ......
T Consensus 165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~---~~~~~~---- 237 (280)
T cd05049 165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE---EVIECI---- 237 (280)
T ss_pred CcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHH----
Confidence 8888876533222222223445788999999999999999999999999999999 99997533221 111111
Q ss_pred cCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 663 NDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 663 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
..+.... .+......+.+++.+||+.||++||++.||+++|+
T Consensus 238 ~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 238 TQGRLLQ---------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1111111 01112346778999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-26 Score=241.21 Aligned_cols=204 Identities=25% Similarity=0.394 Sum_probs=152.0
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCC--eeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE--ENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~--~~~lV~E 571 (760)
.++...+.||+|+||.||++... +|...|||.+........+.+.+|+.+|.+++|||||+.+|...... .++|.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 34666799999999999999965 48999999987553333677899999999999999999999855444 6899999
Q ss_pred ccCCCChhhhh----------------------------------------------------ccccceeEecCC-Cccc
Q 004345 572 YMPNKSLDSFL----------------------------------------------------FDFGLARIFGGN-QDQA 598 (760)
Q Consensus 572 y~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~-~~~~ 598 (760)
|+++|+|.+++ +|||+++..... ....
T Consensus 97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~ 176 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSD 176 (313)
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccccc
Confidence 99999998763 499999876531 1112
Q ss_pred ccceeeeeccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......||+.|||||++..+. ...++||||+||++.||+||++||... .....+........... .
T Consensus 177 ~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~~~~P-----~--- 243 (313)
T KOG0198|consen 177 SELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGREDSLP-----E--- 243 (313)
T ss_pred ccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhccCCCC-----C---
Confidence 334578999999999999643 335999999999999999999998643 11112222222222111 1
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 712 (760)
.+..-.....+++.+|++.||++||||.++++..
T Consensus 244 -ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 244 -IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred -CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 1112234566788899999999999999999864
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.4e-27 Score=252.44 Aligned_cols=197 Identities=27% Similarity=0.410 Sum_probs=157.3
Q ss_pred cccccccccCCceeEEEEEec--CC--cEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ--DG--QEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
..+.++||+|.||.|++|.+. .| ..||||.++.... .....|++|+.+|.+|+|+|+|+|||+..+ ....+|+|
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 345689999999999999975 34 3699999986543 367899999999999999999999999887 77889999
Q ss_pred ccCCCChhhhh----------------------------------------------------ccccceeEecCCCcccc
Q 004345 572 YMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 572 y~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
.++.|||.+.| +||||.|.++.+++...
T Consensus 191 LaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv 270 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV 270 (1039)
T ss_pred hcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceE
Confidence 99999997753 49999999987665432
Q ss_pred c-ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 600 T-KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 600 ~-~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
. ....-.+.|-|||.+....|+.++|||+|||+||||+| |..||...... .+.+.+|..-.-
T Consensus 271 m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~----------------qIL~~iD~~erL 334 (1039)
T KOG0199|consen 271 MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI----------------QILKNIDAGERL 334 (1039)
T ss_pred ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH----------------HHHHhccccccC
Confidence 2 22334678999999999999999999999999999999 67787533221 223334433223
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..+..+.+++.+++..||..+|.+|||+..|.+
T Consensus 335 pRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 335 PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred CCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 345567789999999999999999999999974
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-26 Score=239.87 Aligned_cols=214 Identities=22% Similarity=0.372 Sum_probs=154.4
Q ss_pred ccccccccccccCCceeEEEEE-ecCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeC--CeeEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EENML 568 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~l 568 (760)
.+.|+.+++||+|.||.||||+ ..+|+.||+|++.... .....-..+||.||++|+||||++|.+...+. ...||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3557778999999999999999 5689999999997543 34455678999999999999999999999887 67899
Q ss_pred EEeccCCCChhhh---------------------------------------------------hccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
|+|||++. |.-+ |+|||||+.+......
T Consensus 196 VFeYMdhD-L~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~ 274 (560)
T KOG0600|consen 196 VFEYMDHD-LSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA 274 (560)
T ss_pred EEecccch-hhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCc
Confidence 99999852 2221 3599999987655443
Q ss_pred cccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHH-----HhccCCCcc--c
Q 004345 598 AATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAW-----KLWNDNNVI--D 669 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~ 669 (760)
. .+..+-|+.|.|||.+.+. .|+.++|+||.||||.||++|++.+....+-++...+-... ..|...++. .
T Consensus 275 ~-~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~ 353 (560)
T KOG0600|consen 275 P-YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHAT 353 (560)
T ss_pred c-cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCccc
Confidence 3 3445679999999999865 59999999999999999999999987655444433322211 112211111 1
Q ss_pred ccccc------ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 670 LVDPL------ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 670 ~~d~~------l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+.+. +.+. ...-....++|+...|..||.+|.|+.++++
T Consensus 354 ~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 354 IFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 11111 1111 0111244567777788899999999999876
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-26 Score=239.29 Aligned_cols=204 Identities=25% Similarity=0.360 Sum_probs=151.3
Q ss_pred cccccccccccCCceeEEEEEec----CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ----DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
++|++.+.||+|+||.||+|.+. .+..||+|.++... ....+.|.+|+.++.+++||||++++|++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 56888999999999999999853 35689999987543 23346799999999999999999999999999999999
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
|||+++|+|.++| +|||.+....... ..
T Consensus 85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~-~~ 163 (266)
T cd05064 85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA-IY 163 (266)
T ss_pred EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc-hh
Confidence 9999999998764 2666654321111 11
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......++..|+|||.+....++.++|||||||++||+++ |+.||...... .... ...++...
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~---~~~~----~~~~~~~~--------- 227 (266)
T cd05064 164 TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ---DVIK----AVEDGFRL--------- 227 (266)
T ss_pred cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHHH----HHHCCCCC---------
Confidence 1112334678999999999999999999999999999875 99998533221 1111 11111100
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
..+......+.+++..||+.+|++||++.+|++.|++.
T Consensus 228 ~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 01112234577889999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-26 Score=236.66 Aligned_cols=201 Identities=25% Similarity=0.441 Sum_probs=152.3
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
++|++.+.||+|+||.||++...++..+|+|.+... ....+.|.+|+.++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 457888999999999999999888889999988643 3345689999999999999999999999999999999999999
Q ss_pred CCChhhhh---------------------------------------------------ccccceeEecCCCccccccee
Q 004345 575 NKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 575 ~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
+|+|.+++ +|||+++....... ......
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-~~~~~~ 161 (256)
T cd05114 83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-TSSSGA 161 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce-eccCCC
Confidence 99988653 38887765432221 111223
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 682 (760)
.++..|+|||.+....++.++||||||+++|||++ |+.|+...... ....... ++.. ...+. .
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~---~~~~~i~----~~~~--~~~~~-------~ 225 (256)
T cd05114 162 KFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY---EVVEMIS----RGFR--LYRPK-------L 225 (256)
T ss_pred CCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHH----CCCC--CCCCC-------C
Confidence 45678999999998889999999999999999999 88887532211 1111111 1110 00111 1
Q ss_pred HHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 683 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
....+.+++.+||+.+|++||++.+++++|.
T Consensus 226 ~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 226 ASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1246788999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-26 Score=237.31 Aligned_cols=203 Identities=32% Similarity=0.471 Sum_probs=156.4
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.++|++.++||+|+||.||+|...+++.||+|.+... ....+.+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 3578899999999999999999888889999998653 234678999999999999999999999999999999999999
Q ss_pred CCCChhhhh----------------------------------------------------ccccceeEecCCCcccccc
Q 004345 574 PNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 574 ~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++++|.++| .|||+++........ ...
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~ 162 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT-ARE 162 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCcee-ccC
Confidence 999987653 389998876432211 112
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...++..|+|||.+....++.++|||||||++|||++ |+.|+...... ...... ...... +. ..
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~----~~~~~~----~~-~~--- 227 (261)
T cd05072 163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS---DVMSAL----QRGYRM----PR-ME--- 227 (261)
T ss_pred CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH---HHHHHH----HcCCCC----CC-CC---
Confidence 2345678999999998889999999999999999998 88888532211 111111 111000 00 01
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
.....+.+++.+|++.+|++||+++++.++|++
T Consensus 228 -~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 228 -NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred -CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 122457789999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.8e-27 Score=245.38 Aligned_cols=213 Identities=22% Similarity=0.322 Sum_probs=156.0
Q ss_pred ccccccccccccCCceeEEEEE-ecCCcEEEEEEecccCccch-HhHHHHHHHHhcCC-CCccceeeeEEEeCC-eeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQ-EEFMNEVMVISNLQ-HRNLVRLLGCCVERE-ENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~-~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~-~~~lV 569 (760)
.++|..+++||.|.||.||+|+ ..++..||||++++...... -.=+||++.|++|+ |||||+|.+++.+.+ .+++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 4678999999999999999999 56789999999986533222 23468999999998 999999999999988 89999
Q ss_pred EeccCCCChhhh---------------------------------------------------hccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~ 598 (760)
||||+ .+|+++ |+||||||.+.....
T Consensus 89 fE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP-- 165 (538)
T KOG0661|consen 89 FEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP-- 165 (538)
T ss_pred HHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCC--
Confidence 99995 455554 359999998754433
Q ss_pred ccceeeeeccccCccccc-cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHH-----HhccCC-Cccccc
Q 004345 599 ATKRLVGTYGYMSPEYAM-EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAW-----KLWNDN-NVIDLV 671 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~ 671 (760)
.+..+.|..|+|||++. .+.|+.+.||||+||+++|+.+-++-|+...+-++...+-.+. ..|.++ .+...+
T Consensus 166 -YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~m 244 (538)
T KOG0661|consen 166 -YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAM 244 (538)
T ss_pred -cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHh
Confidence 34568899999999976 5679999999999999999999998887554433322111110 011110 000011
Q ss_pred c---cc-----ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 672 D---PL-----ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 672 d---~~-----l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
. |. +..-. +....++++++.+|+++||.+|||+.|.+++
T Consensus 245 nf~~P~~~~~~l~~L~-p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 245 NFRFPQVKPSPLKDLL-PNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred ccCCCcCCCCChHHhC-cccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 0 11 11111 1245778899999999999999999999884
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-26 Score=237.69 Aligned_cols=206 Identities=28% Similarity=0.451 Sum_probs=155.4
Q ss_pred ccccccccccccCCceeEEEEEecC----CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQD----GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
.++|++.+.||+|+||.||+|.+.. ...||||.++... .....+|.+|+.++++++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 3568889999999999999998642 4579999987543 3345679999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||||+++++|.+++ +|||+++.+......
T Consensus 83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd05033 83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT 162 (266)
T ss_pred EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccc
Confidence 99999999998763 388888876422222
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......++..|+|||.+....++.++||||||+++|||++ |..|+...... ...... ..+... +
T Consensus 163 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~----~~~~~~----~--- 228 (266)
T cd05033 163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ---DVIKAV----EDGYRL----P--- 228 (266)
T ss_pred eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH---HHHHHH----HcCCCC----C---
Confidence 22222345678999999998999999999999999999998 98887532211 111111 111000 0
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
.+......+.+++.+||+.+|++||++.+|+++|+++
T Consensus 229 --~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 229 --PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0111234678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-26 Score=238.75 Aligned_cols=204 Identities=29% Similarity=0.435 Sum_probs=158.1
Q ss_pred hccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+..+|++.++||+|+||.||+|...+++.+|+|.+..........+.+|+.++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 45678889999999999999999888999999999866555677899999999999999999999999999999999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+++++|.+++ +|||++........ ..
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~--~~ 161 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY--LS 161 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc--cc
Confidence 9999998763 27777765432211 11
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
....++..|+|||.+....++.++||||||++++||++ |+.|+...... ....... .+. ....
T Consensus 162 ~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~---~~~~~~~----~~~---------~~~~ 225 (261)
T cd05148 162 SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH---EVYDQIT----AGY---------RMPC 225 (261)
T ss_pred cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH---HHHHHHH----hCC---------cCCC
Confidence 12345678999999998899999999999999999998 88888543211 1111111 100 0011
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
+......+.+++.+||+.||++|||++++++.|++
T Consensus 226 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 226 PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 11223567789999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.9e-26 Score=244.22 Aligned_cols=148 Identities=28% Similarity=0.393 Sum_probs=126.2
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.++|++.+.||+|+||.||+++.. ++..+|+|.+.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367899999999999999999965 67889999987542 2345679999999999999999999999999999999999
Q ss_pred ccCCCChhhhh---------------------------------------------------ccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|+++++|.+++ +|||+++.+... ..
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 159 (331)
T cd06649 84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MA 159 (331)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc----cc
Confidence 99999998763 388888755321 12
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 160 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 235689999999999998999999999999999999999999864
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-26 Score=220.41 Aligned_cols=230 Identities=21% Similarity=0.337 Sum_probs=163.4
Q ss_pred cccccccccccCCceeEEEEE-ecCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.+|...++||+|.||.||+|+ .++++.||||+++... ..-....++|++.|+.++|+||+.|+++|-..+..-||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 467778999999999999999 5689999999997542 2224568999999999999999999999999999999999
Q ss_pred ccCCCChhhh---------------------------------------------------hccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~~ 600 (760)
||+. +|+.. |+|||+|+.+.......
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~-- 158 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ-- 158 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccc--
Confidence 9973 44332 25999999986543322
Q ss_pred ceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCC---cccccc----
Q 004345 601 KRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN---VIDLVD---- 672 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d---- 672 (760)
...+-|..|.|||.+.+. .|+...||||.||++.||+-|.+-+....+-++...+-.+.-...+.. +.++.|
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~ 238 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKI 238 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence 223779999999998754 599999999999999999998876654333333222211111111111 111111
Q ss_pred ----ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCCCCCCCceee
Q 004345 673 ----PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAFTV 729 (760)
Q Consensus 673 ----~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~~p~~p~~~~ 729 (760)
...............++++..++..||.+|+|++|.+++ .-.+..|.|..|....
T Consensus 239 ~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~--~yf~~~P~pt~~~~lp 297 (318)
T KOG0659|consen 239 QQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH--PYFKSLPLPTPPSKLP 297 (318)
T ss_pred hcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc--hhhhcCCCCCChhhCc
Confidence 111111233344566899999999999999999999885 2334567776665543
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-26 Score=240.54 Aligned_cols=207 Identities=27% Similarity=0.447 Sum_probs=157.5
Q ss_pred cccccccccccCCceeEEEEEec------CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
.+|.+.+.||+|+||.||+|+.. ++..+++|.+........+.+.+|+.++++++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45778899999999999999742 356799999876555556789999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh------------------------------------------------------------------
Q 004345 569 IYEYMPNKSLDSFL------------------------------------------------------------------ 582 (760)
Q Consensus 569 V~Ey~~~gsL~~~L------------------------------------------------------------------ 582 (760)
||||+++++|.++|
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l 164 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKI 164 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEE
Confidence 99999999886642
Q ss_pred ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHh
Q 004345 583 FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKL 661 (760)
Q Consensus 583 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 661 (760)
+|||+++...............++..|+|||.+....++.++||||||+++|||++ |+.|+....... .. ..
T Consensus 165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~----~~ 237 (291)
T cd05094 165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---VI----EC 237 (291)
T ss_pred CCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HH
Confidence 38888775433222222223456788999999999999999999999999999999 999875432211 11 11
Q ss_pred ccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 662 WNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 662 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
...+...+. .......+.+++.+||+.+|++||++.+|+++|+++.+
T Consensus 238 ~~~~~~~~~---------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 238 ITQGRVLER---------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HhCCCCCCC---------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 112211111 11123467889999999999999999999999998854
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=234.70 Aligned_cols=203 Identities=31% Similarity=0.433 Sum_probs=155.4
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.++|++.+.||+|++|.||+|...+++.||+|.++... ...++|.+|+.++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 45688899999999999999998778899999986543 34677999999999999999999999999999999999999
Q ss_pred CCCChhhhh----------------------------------------------------ccccceeEecCCCcccccc
Q 004345 574 PNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 574 ~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++++|.+++ +|||+++....... ....
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~ 162 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY-EARE 162 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-cccC
Confidence 999997663 38998887642211 1111
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....+..|+|||.+....++.++||||||+++|||++ |+.|+...... .... ....... ....
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~----~~~~~~~---------~~~~ 226 (261)
T cd05068 163 GAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA---EVLQ----QVDQGYR---------MPCP 226 (261)
T ss_pred CCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHHH----HHHcCCC---------CCCC
Confidence 1223468999999999999999999999999999999 88887532211 1111 1111100 0011
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
......+.+++.+|++.+|++||++.++++.|++
T Consensus 227 ~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 227 PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 1223567889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-26 Score=240.11 Aligned_cols=215 Identities=22% Similarity=0.321 Sum_probs=153.3
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|++.+.||+|+||.||+++.. +++.||||+++... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47899999999999999999975 67889999987532 3345678899999999999999999999999999999999
Q ss_pred ccCCCChhhh--------------------------------------------------hccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
|++++.+..+ |+|||+++.+..... ....
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~ 159 (287)
T cd07848 81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-ANYT 159 (287)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc-cccc
Confidence 9998866543 249999887643221 1222
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHH--------Hhc-cCCCcccccc
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAW--------KLW-NDNNVIDLVD 672 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~d 672 (760)
...|++.|+|||++.+..++.++|||||||++|||++|+.||...........+.... ..+ ..........
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (287)
T cd07848 160 EYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRF 239 (287)
T ss_pred ccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccccc
Confidence 3578999999999998889999999999999999999999986433221111110000 000 0000000000
Q ss_pred ccccCC------CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 PLISES------GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ~~l~~~------~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+..... ........+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 240 PAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred CcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000 00011245789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.6e-26 Score=238.53 Aligned_cols=206 Identities=28% Similarity=0.422 Sum_probs=153.1
Q ss_pred hccccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE 565 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~ 565 (760)
..++|++.+.||+|+||.||+|... .+..||||++.... .....+|.+|+.++++++||||+++++++.++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999753 34679999986432 2345579999999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhh------------------------------------------------------------ccc
Q 004345 566 NMLIYEYMPNKSLDSFL------------------------------------------------------------FDF 585 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L------------------------------------------------------------~DF 585 (760)
.++||||+++++|.+++ +||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~df 163 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF 163 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCC
Confidence 99999999999886542 388
Q ss_pred cceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccC
Q 004345 586 GLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWND 664 (760)
Q Consensus 586 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 664 (760)
|+++.+.............+++.|||||.+....++.++|||||||++|||++ |..|+...... .... ....
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~---~~~~----~~~~ 236 (277)
T cd05062 164 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE---QVLR----FVME 236 (277)
T ss_pred CCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHH----HHHc
Confidence 88775533222221222345778999999998899999999999999999999 67787532221 1111 1111
Q ss_pred CCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 665 NNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 665 ~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
...... +......+.+++.+|++.+|++|||+.|++++|++
T Consensus 237 ~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 237 GGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred CCcCCC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 111110 11122457889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=237.13 Aligned_cols=204 Identities=28% Similarity=0.455 Sum_probs=152.2
Q ss_pred cccccccccccCCceeEEEEEe-----cCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-----QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++|++.+.||+|+||.||+|.. ..++.||+|.+.... .+....|.+|+.++++++||||+++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577889999999999999984 246789999997533 2344679999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh------------------------------------------------------------------
Q 004345 569 IYEYMPNKSLDSFL------------------------------------------------------------------ 582 (760)
Q Consensus 569 V~Ey~~~gsL~~~L------------------------------------------------------------------ 582 (760)
||||+++++|.++|
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~k 164 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVK 164 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEE
Confidence 99999999886542
Q ss_pred -ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHH
Q 004345 583 -FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWK 660 (760)
Q Consensus 583 -~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 660 (760)
.|||+++...............++..|+|||++....++.++||||||+++|||++ |..|+...... ....
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~---~~~~---- 237 (283)
T cd05090 165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ---EVIE---- 237 (283)
T ss_pred eccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHH----
Confidence 38998876543322222223445678999999988889999999999999999998 88887532211 1111
Q ss_pred hccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 661 LWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 661 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
......... .+......+.+++.+||+.||++||++.+|.++|..
T Consensus 238 ~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MVRKRQLLP---------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHcCCcCC---------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111111110 011122457788899999999999999999998853
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.6e-26 Score=239.27 Aligned_cols=207 Identities=29% Similarity=0.475 Sum_probs=156.2
Q ss_pred cccccccccccCCceeEEEEEe------cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++|.+.+.||+|+||.||++.. .++..+|+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 5688889999999999999984 2345699999876655556789999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh---------------------------------------------------------------ccc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------------------FDF 585 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------------------~DF 585 (760)
||||+++++|.++| +||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~df 164 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF 164 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccC
Confidence 99999999986442 388
Q ss_pred cceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccC
Q 004345 586 GLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWND 664 (760)
Q Consensus 586 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 664 (760)
|+++...............++..|+|||.+....++.++|||||||+++||++ |..|+...... .... ....
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~---~~~~----~i~~ 237 (288)
T cd05093 165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN---EVIE----CITQ 237 (288)
T ss_pred CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHc
Confidence 88875532222122223345778999999998899999999999999999999 88887533221 1111 1111
Q ss_pred CCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 665 NNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 665 ~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
+.... .... ....+.+++.+||+.||.+|||+.+|++.|+++.+
T Consensus 238 ~~~~~-----~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 238 GRVLQ-----RPRT----CPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred CCcCC-----CCCC----CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 11111 1111 12457889999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd00028 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=200.63 Aligned_cols=115 Identities=43% Similarity=0.700 Sum_probs=100.3
Q ss_pred CcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEEEcCCCCE
Q 004345 31 QFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQV 110 (760)
Q Consensus 31 ~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l~d~~~~~ 110 (760)
+.|.++++|+|+++.|++|||.+. .....+++|||.+. + +++||.|||+.| ....+.|.|+.||+|+|.|.+|.+
T Consensus 2 ~~l~~~~~l~s~~~~f~~G~~~~~-~q~~dgnlv~~~~~--~-~~~vW~snt~~~-~~~~~~l~l~~dGnLvl~~~~g~~ 76 (116)
T cd00028 2 NPLSSGQTLVSSGSLFELGFFKLI-MQSRDYNLILYKGS--S-RTVVWVANRDNP-SGSSCTLTLQSDGNLVIYDGSGTV 76 (116)
T ss_pred cCcCCCCEEEeCCCcEEEecccCC-CCCCeEEEEEEeCC--C-CeEEEECCCCCC-CCCCEEEEEecCCCeEEEcCCCcE
Confidence 568899999999999999999987 32238999999885 4 789999999998 456789999999999999999999
Q ss_pred EEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCC
Q 004345 111 HWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEP 153 (760)
Q Consensus 111 vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~P 153 (760)
+|+|++... ....+|.|+|+|||||++. .+.+||||||||
T Consensus 77 vW~S~~~~~--~~~~~~~L~ddGnlvl~~~-~~~~~W~Sf~~P 116 (116)
T cd00028 77 VWSSNTTRV--NGNYVLVLLDDGNLVLYDS-DGNFLWQSFDYP 116 (116)
T ss_pred EEEecccCC--CCceEEEEeCCCCEEEECC-CCCEEEcCCCCC
Confidence 999998652 2567899999999999998 477899999999
|
The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.9e-26 Score=242.56 Aligned_cols=206 Identities=24% Similarity=0.440 Sum_probs=152.8
Q ss_pred cccccccccccCCceeEEEEEec-CCc----EEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQ----EIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
.+|++.+.||+|+||.||+|++. +++ .||+|.++... ....++|.+|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46888999999999999999853 333 48999987543 34456899999999999999999999999764 5789
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
|+||+++|+|.+++ +|||+++.+......
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 165 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE 165 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcc
Confidence 99999999987652 399999876533322
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......++..|||||.+....++.++|||||||++|||++ |+.|+...... .+ ......+...
T Consensus 166 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~---~~----~~~~~~~~~~-------- 230 (316)
T cd05108 166 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---EI----SSILEKGERL-------- 230 (316)
T ss_pred eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HH----HHHHhCCCCC--------
Confidence 22222334678999999999999999999999999999998 99988532211 11 1111111100
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
..+......+.+++.+||+.+|++||++.+++..|....+
T Consensus 231 -~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 231 -PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 0011122457789999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.8e-26 Score=247.12 Aligned_cols=193 Identities=24% Similarity=0.385 Sum_probs=156.5
Q ss_pred HhccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCee
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~ 566 (760)
...++|.++++||+|.||+|+++.++ +++.+|||.+++. ..+..+..+.|.+|+... +||.|++|+.++...++.
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 34568999999999999999999965 6789999999875 355677889999988777 599999999999999999
Q ss_pred EEEEeccCCCChhhh-------------------------------------------------hccccceeEecCCCcc
Q 004345 567 MLIYEYMPNKSLDSF-------------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~-------------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
+.||||+.||++..+ |+||||+|..... .
T Consensus 445 ~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~--g 522 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ--G 522 (694)
T ss_pred EEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCC--C
Confidence 999999999997543 3599999964322 2
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
..+.+.+||+.|||||++.+..|+..+|.|||||+||||+.|..||....++ ++.|..+.+
T Consensus 523 ~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-------------------e~FdsI~~d 583 (694)
T KOG0694|consen 523 DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-------------------EVFDSIVND 583 (694)
T ss_pred CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-------------------HHHHHHhcC
Confidence 3566799999999999999999999999999999999999999999754433 222222222
Q ss_pred C--CCHHHHHHHHHHHHhcccCCcCCCCCH
Q 004345 678 S--GFKMEIIRCVNVGLLCVQEFVKDRPNM 705 (760)
Q Consensus 678 ~--~~~~~~~~~~~l~~~Cl~~~P~~RPt~ 705 (760)
+ ++.....+.+.|+.+.+..||++|.-+
T Consensus 584 ~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 584 EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 1 233344677888889999999999876
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-25 Score=234.81 Aligned_cols=198 Identities=22% Similarity=0.317 Sum_probs=149.3
Q ss_pred cccccccccCCceeEEEEEe-cCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 497 FQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
|+..+.||+|+||.||++.. .+++.||||.+.... ......+.+|+.++.+++|+||+++++++.+++..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67789999999999999985 578999999986432 23345688999999999999999999999999999999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+++|+|..++ +|||+++....... .
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~---~ 158 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET---V 158 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe---e
Confidence 9999996542 39999987532221 2
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....||..|||||++....++.++|||||||++|||++|+.||......... ........... ....
T Consensus 159 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~----------~~~~ 225 (285)
T cd05631 159 RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR---EEVDRRVKEDQ----------EEYS 225 (285)
T ss_pred cCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH---HHHHHHhhccc----------ccCC
Confidence 2356899999999999999999999999999999999999998643321111 10111110000 0011
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCC-----HHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPN-----MPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 710 (760)
..-...+.+++.+||+.||++||+ ++++++
T Consensus 226 ~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 226 EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 112245678889999999999997 777776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=249.20 Aligned_cols=212 Identities=25% Similarity=0.376 Sum_probs=155.9
Q ss_pred HHHhccccccccccccCCceeEEEEEec------CCcEEEEEEecccCc-cchHhHHHHHHHHhcCC-CCccceeeeEEE
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQ-HRNLVRLLGCCV 561 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~ 561 (760)
+..+.++|.+.++||+|+||.||+|++. .++.||||+++.... ...+.+++|+++|.++. |||||+++++|.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 3444567888899999999999999853 346899999975432 23457999999999997 999999999999
Q ss_pred eCCeeEEEEeccCCCChhhhh-----------------------------------------------------------
Q 004345 562 EREENMLIYEYMPNKSLDSFL----------------------------------------------------------- 582 (760)
Q Consensus 562 ~~~~~~lV~Ey~~~gsL~~~L----------------------------------------------------------- 582 (760)
..+..++||||+++|+|.++|
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 999999999999999885322
Q ss_pred --------------------------------------------------------------------------------
Q 004345 583 -------------------------------------------------------------------------------- 582 (760)
Q Consensus 583 -------------------------------------------------------------------------------- 582 (760)
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiL 271 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVL 271 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEE
Confidence
Q ss_pred ---------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccc
Q 004345 583 ---------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFEL 652 (760)
Q Consensus 583 ---------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~ 652 (760)
+|||+++.+.............++..|||||.+....++.++|||||||++|||++ |..|+......+
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~-- 349 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE-- 349 (401)
T ss_pred EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH--
Confidence 38888876532222112223456788999999998889999999999999999998 888875332111
Q ss_pred cHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 653 TLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
........+.. + ..+......+.+++.+||+.+|++||++++|++.|++++
T Consensus 350 ----~~~~~~~~~~~-----~----~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 350 ----QFYNAIKRGYR-----M----AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ----HHHHHHHcCCC-----C----CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 01111111100 0 011112346778888999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-25 Score=242.32 Aligned_cols=202 Identities=22% Similarity=0.295 Sum_probs=148.7
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|+..++||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 34566789999999999999964 68999999986442 23356799999999999999999999999999999999999
Q ss_pred cCCCChhhh----------------------------------------------hccccceeEecCCCcccccceeeee
Q 004345 573 MPNKSLDSF----------------------------------------------LFDFGLARIFGGNQDQAATKRLVGT 606 (760)
Q Consensus 573 ~~~gsL~~~----------------------------------------------L~DFGla~~~~~~~~~~~~~~~~gt 606 (760)
+++|+|... |+|||+++.+..... ......||
T Consensus 154 ~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt 231 (353)
T PLN00034 154 MDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD--PCNSSVGT 231 (353)
T ss_pred CCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc--cccccccC
Confidence 999998643 249999987643221 12335789
Q ss_pred ccccCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 607 YGYMSPEYAME-----GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 607 ~~y~aPE~~~~-----~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
..|+|||.+.. ...+.++|||||||++|||++|+.||...... ............ . ......
T Consensus 232 ~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~---~~~~~~~~~~~~-~---------~~~~~~ 298 (353)
T PLN00034 232 IAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG---DWASLMCAICMS-Q---------PPEAPA 298 (353)
T ss_pred ccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc---cHHHHHHHHhcc-C---------CCCCCC
Confidence 99999998743 23456899999999999999999998632211 111111100000 0 000111
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.....+.+++.+||+.||++|||+.||++.
T Consensus 299 ~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 299 TASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 123457788999999999999999999874
|
|
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=236.35 Aligned_cols=204 Identities=31% Similarity=0.491 Sum_probs=151.1
Q ss_pred ccccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 566 (760)
.++|++.+.||+|++|.||+|... .+..||+|.+.... ......|.+|+.++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 467899999999999999999865 35679999886443 33345799999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhh------------------------------------------------------------cccc
Q 004345 567 MLIYEYMPNKSLDSFL------------------------------------------------------------FDFG 586 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L------------------------------------------------------------~DFG 586 (760)
++||||+++++|.++| +|||
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg 164 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFG 164 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCc
Confidence 9999999999988652 2777
Q ss_pred ceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCC
Q 004345 587 LARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDN 665 (760)
Q Consensus 587 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (760)
+++.+..............+..|+|||++....++.++|||||||++|||++ |+.||...... .+.... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~---~~~~~~----~~~ 237 (277)
T cd05036 165 MARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ---EVMEFV----TGG 237 (277)
T ss_pred cccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHH----HcC
Confidence 7765422211111112233568999999999999999999999999999997 88888633221 111111 111
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 666 NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 666 ~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
... ..+......+.+++.+|++.+|++||++.+|++.|+
T Consensus 238 ~~~---------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 238 GRL---------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CcC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 000 011112346778999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-26 Score=246.56 Aligned_cols=194 Identities=26% Similarity=0.421 Sum_probs=156.8
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCChh
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLD 579 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~ 579 (760)
-+||+|.||+||-|+.. +...+|||.+.....+..+-+..|+.+.++|+|.|||+++|.|.+++..-|.||.+|||||.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 47999999999999954 55679999998777777788999999999999999999999999999999999999999998
Q ss_pred hhh------------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 580 SFL------------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 580 ~~L------------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
.+| +|||.+|.+.+-. ..+....|
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin--P~TETFTG 738 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN--PCTETFTG 738 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCC--cccccccc
Confidence 874 3999998774332 23445789
Q ss_pred eccccCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 606 TYGYMSPEYAMEGR--FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 606 t~~y~aPE~~~~~~--~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
|..|||||++..++ |..++|||||||++.||.||++||-...+... .. ++- .+. ..+.+.+.+-
T Consensus 739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA----AM----FkV-Gmy-----KvHP~iPeel 804 (1226)
T KOG4279|consen 739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA----AM----FKV-GMY-----KVHPPIPEEL 804 (1226)
T ss_pred chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH----hh----hhh-cce-----ecCCCCcHHH
Confidence 99999999998765 88999999999999999999999853322210 00 000 000 1133445566
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..++..++++|..++|.+||++.++++
T Consensus 805 saeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 805 SAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 678889999999999999999999987
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-25 Score=232.65 Aligned_cols=205 Identities=23% Similarity=0.342 Sum_probs=152.9
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.++||+|+||.||+|.. .+++.||+|.+... .....++|.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3577889999999999999985 57889999998654 233456799999999999999999999999999999999999
Q ss_pred cCCCChhhh----------------------------------------------hccccceeEecCCCcccccceeeee
Q 004345 573 MPNKSLDSF----------------------------------------------LFDFGLARIFGGNQDQAATKRLVGT 606 (760)
Q Consensus 573 ~~~gsL~~~----------------------------------------------L~DFGla~~~~~~~~~~~~~~~~gt 606 (760)
+++++|..+ |+|||++..+... ......++
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~----~~~~~~~~ 156 (279)
T cd06619 81 MDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS----IAKTYVGT 156 (279)
T ss_pred CCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----cccCCCCC
Confidence 999988643 2499998765322 12235789
Q ss_pred ccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHH
Q 004345 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIR 686 (760)
Q Consensus 607 ~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 686 (760)
..|+|||.+....++.++||||||+++|||++|+.||....................... .+.+.. ......
T Consensus 157 ~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~ 228 (279)
T cd06619 157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVLPV---GQFSEK 228 (279)
T ss_pred hhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCCCC---CcCCHH
Confidence 999999999998999999999999999999999999864322211110000011111100 111111 112245
Q ss_pred HHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 687 CVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 687 ~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
+.+++.+|++.+|++||++.|+++.
T Consensus 229 ~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 229 FVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHHHHhhCChhhCCCHHHHhcC
Confidence 7788999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=237.24 Aligned_cols=205 Identities=26% Similarity=0.387 Sum_probs=153.6
Q ss_pred ccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
+|++.+.||+|+||.||+|... ....+|+|.+.... ....+++.+|+.++++++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999853 23578999886543 2335679999999999999999999999999999999
Q ss_pred EEeccCCCChhhh-------------------------------------------------------------------
Q 004345 569 IYEYMPNKSLDSF------------------------------------------------------------------- 581 (760)
Q Consensus 569 V~Ey~~~gsL~~~------------------------------------------------------------------- 581 (760)
|+||+++++|.++
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill 160 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV 160 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence 9999999998753
Q ss_pred -------hccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCccccccc
Q 004345 582 -------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELT 653 (760)
Q Consensus 582 -------L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~ 653 (760)
|+|||+++...............++..|+|||.+....++.++||||||++++||++ |+.|+...... .
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~ 237 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE---R 237 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH---H
Confidence 138998876533322222223345678999999988889999999999999999999 98888532211 1
Q ss_pred HHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 654 LLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.+....... ....+......+.+++.+|++.+|++||++.+++++|++++
T Consensus 238 ----~~~~~~~~~---------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 238 ----LFNLLKTGY---------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred ----HHHHHhCCC---------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 111111110 00111112346778999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.9e-26 Score=243.16 Aligned_cols=199 Identities=22% Similarity=0.323 Sum_probs=158.9
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecc--cCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe-eEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSK--ASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE-NMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~--~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~-~~lV~ 570 (760)
++|..++++|+|+||.++..+.+ +++.+++|.+.- .....++...+|+.++++++|||||.+.+.+++++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56888899999999999998854 567899998863 344556678999999999999999999999999998 89999
Q ss_pred eccCCCChhhhh----------------------------------------------------ccccceeEecCCCccc
Q 004345 571 EYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 571 Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
+|++||+|.+.| .|||+||.+.... .
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~--~ 161 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED--S 161 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch--h
Confidence 999999998763 2999999986443 2
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
.....+||+.||.||.+.+.+|..|+||||+||++|||++-+++|...+. ...+.+..+. .+ ..
T Consensus 162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m------~~Li~ki~~~-----~~-----~P 225 (426)
T KOG0589|consen 162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM------SELILKINRG-----LY-----SP 225 (426)
T ss_pred hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch------HHHHHHHhhc-----cC-----CC
Confidence 34468999999999999999999999999999999999999999863221 1111111111 11 12
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.+......+..++..|++.+|+.||++.+++.+
T Consensus 226 lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 226 LPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 233344566677889999999999999999875
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=235.21 Aligned_cols=211 Identities=27% Similarity=0.449 Sum_probs=151.0
Q ss_pred ccccccccccccCCceeEEEEEecC---------------CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQD---------------GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLL 557 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~---------------~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~ 557 (760)
.++|++.++||+|+||.||++.... ...||+|.++... ....+.|.+|++++++++|+||++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3578999999999999999987532 2358999987542 33456799999999999999999999
Q ss_pred eEEEeCCeeEEEEeccCCCChhhhh-------------------------------------------------------
Q 004345 558 GCCVEREENMLIYEYMPNKSLDSFL------------------------------------------------------- 582 (760)
Q Consensus 558 g~~~~~~~~~lV~Ey~~~gsL~~~L------------------------------------------------------- 582 (760)
+++...+..++||||+++++|.++|
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~ 163 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVG 163 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEc
Confidence 9999999999999999999885532
Q ss_pred -------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhC--CCCCCCCccccccc
Q 004345 583 -------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG--RKNTSFYHEEFELT 653 (760)
Q Consensus 583 -------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG--~~p~~~~~~~~~~~ 653 (760)
+|||+++.+.............++..|+|||.+....++.++|||||||+++||+++ ..|+.....+ .
T Consensus 164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~---~ 240 (295)
T cd05097 164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE---Q 240 (295)
T ss_pred CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH---H
Confidence 388888755322222222233456789999999988999999999999999999984 4555432211 1
Q ss_pred HHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 654 LLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
.+....+.+......... ..+......+.+++.+||+.+|++||+|++|+++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 VIENTGEFFRNQGRQIYL------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHhhhhccccccC------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 111111111111000000 001112357889999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=233.05 Aligned_cols=203 Identities=29% Similarity=0.439 Sum_probs=153.5
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.+|++.++||+|+||.||+|... .++.||+|.+... ....+++.+|++++.+++|+||+++++++..+...++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 45778899999999999999964 5789999998643 344678999999999999999999999999999999999999
Q ss_pred CCCChhhhh----------------------------------------------------ccccceeEecCCCcccccc
Q 004345 574 PNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 574 ~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++++|.+++ .|||+++....... ....
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-~~~~ 163 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-TAHA 163 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccccee-eccC
Confidence 999998763 38888876532211 1111
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...++..|+|||.+....++.++|||||||++|||++ |..|+.....+ . .......+. ....+
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~------~-~~~~~~~~~---------~~~~~ 227 (263)
T cd05052 164 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------Q-VYELLEKGY---------RMERP 227 (263)
T ss_pred CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH------H-HHHHHHCCC---------CCCCC
Confidence 2234568999999999999999999999999999998 88887532211 1 111111110 00111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
......+.+++.+||+.+|++||++.+++++|+++
T Consensus 228 ~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 228 EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11234677889999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=242.77 Aligned_cols=203 Identities=22% Similarity=0.332 Sum_probs=153.9
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++.+++||||+++++++...+..+|||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46889999999999999999965 58899999997542 234567899999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++|+|.++| +|||+++.... ..
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-----~~ 155 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-----YA 155 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----cc
Confidence 999999998763 39999876532 22
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....||+.|+|||.+....++.++|||||||++|||++|+.||......+.. .... .+. .... .+.... ..
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~---~~i~-~~~--~~~~--~~~~~~-~~ 226 (333)
T cd05600 156 NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW---ENLK-YWK--ETLQ--RPVYDD-PR 226 (333)
T ss_pred CCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHH---HHHH-hcc--cccc--CCCCCc-cc
Confidence 3457899999999999999999999999999999999999998643222111 0000 000 0000 000000 00
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
......+.+++.+|++.+|++||++.++++.
T Consensus 227 ~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 227 FNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 1123456778889999999999999999975
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=235.43 Aligned_cols=220 Identities=26% Similarity=0.375 Sum_probs=154.4
Q ss_pred ccc-ccccccccCCceeEEEEEe-----cCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeC--Ce
Q 004345 495 NNF-QLANKLGQGGFGPVYKGKL-----QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EE 565 (760)
Q Consensus 495 ~~~-~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~ 565 (760)
++| ++.+.||+|+||.||++.. .+++.||+|.+.... ....+.|.+|++++++++||||+++++++... ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence 344 7889999999999988653 357789999987543 23456789999999999999999999998764 35
Q ss_pred eEEEEeccCCCChhhhh-------------------------------------------------ccccceeEecCCCc
Q 004345 566 NMLIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~ 596 (760)
.++||||+++++|.+++ +|||+++.......
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred EEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 78999999999998762 38999886543222
Q ss_pred cc-ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 QA-ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 ~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
.. ......++..|+|||.+....++.++||||||++++||++|+.|+........ ................+.++...
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 241 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQGQMTVVRLIELLERGM 241 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhcccccccchhhhhhhhhcCC
Confidence 11 11123456679999999988999999999999999999999999753221100 00000000000111111222111
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
....+......+.+++..||+.+|++|||+++|+++|+++
T Consensus 242 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 242 RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 1111222345788899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-25 Score=232.48 Aligned_cols=213 Identities=22% Similarity=0.334 Sum_probs=155.1
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhc--CCCCccceeeeEEEeCC----eeE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISN--LQHRNLVRLLGCCVERE----ENM 567 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~--l~H~nIv~l~g~~~~~~----~~~ 567 (760)
..+..+.+.||+|.||.||+|.++ |+.||||++. ..+++.+.+|.+|.+. |+|+||+.+++.-..++ +++
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~---srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFS---SRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEec---ccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 356788899999999999999996 8999999995 4456788899998875 59999999999865543 579
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------------ccccceeE
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------------FDFGLARI 590 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------------~DFGla~~ 590 (760)
||++|-++|||++|| +|+|||-.
T Consensus 286 LvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred EeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 999999999999995 39999987
Q ss_pred ecCCCcc--cccceeeeeccccCccccccCC----CC--ccchhHHHHHHHHHHHhCC----------CCCCCCcccccc
Q 004345 591 FGGNQDQ--AATKRLVGTYGYMSPEYAMEGR----FS--EKSDVFSFGVLLLEIVSGR----------KNTSFYHEEFEL 652 (760)
Q Consensus 591 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~----~s--~ksDVwSfGv~l~ElltG~----------~p~~~~~~~~~~ 652 (760)
.....+. ...+..+||-+|||||++.... |. ..+||||||.++||+.... .||....+.+.
T Consensus 366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP- 444 (513)
T KOG2052|consen 366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP- 444 (513)
T ss_pred ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC-
Confidence 6544322 3455679999999999986432 22 3689999999999998542 23322211110
Q ss_pred cHHHHHHHhccCCCccccccccccCC-CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 653 TLLGYAWKLWNDNNVIDLVDPLISES-GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
+. + .+++--..+-+.|.+... ...+.+..+.++|..||..||..|-|+--|-+.|.++.
T Consensus 445 s~-e----eMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 445 SF-E----EMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred CH-H----HHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 00 0 001101111122332222 24567788999999999999999999999999998875
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-25 Score=252.38 Aligned_cols=199 Identities=17% Similarity=0.213 Sum_probs=152.1
Q ss_pred ccccccccccCCceeEEEEEec-C-CcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-D-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~-~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+.+|+.++++++|||||++++++..++..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888999999999999999853 3 5778888775544444567889999999999999999999999999999999999
Q ss_pred CCCChhhhh------------------------------------------------------ccccceeEecCCCcccc
Q 004345 574 PNKSLDSFL------------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 574 ~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
++|+|.++| +|||+++.+........
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~ 227 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDV 227 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccccc
Confidence 999996532 39999987654332223
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
....+||+.|||||++....++.++|||||||++|||++|+.||...... ........ +.. ++ .
T Consensus 228 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~------~~~~~~~~-~~~----~~-----~ 291 (478)
T PTZ00267 228 ASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR------EIMQQVLY-GKY----DP-----F 291 (478)
T ss_pred ccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHh-CCC----CC-----C
Confidence 34467999999999999999999999999999999999999998532211 11111111 111 00 0
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+......+.+++.+||+.||++||++.+++.
T Consensus 292 ~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 292 PCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 1112245778889999999999999999864
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-25 Score=231.13 Aligned_cols=201 Identities=26% Similarity=0.464 Sum_probs=152.6
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
++|.+.+.||+|+||.||+|...++..+|||.+... ....++|.+|+.++.+++||||+++++++.+....++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 457888999999999999999877778999998743 2345679999999999999999999999999999999999999
Q ss_pred CCChhhhh---------------------------------------------------ccccceeEecCCCccccccee
Q 004345 575 NKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 575 ~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
+|+|.++| +|||+++........ .....
T Consensus 83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~-~~~~~ 161 (256)
T cd05113 83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT-SSVGS 161 (256)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee-ecCCC
Confidence 99887763 388887765332211 11123
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 682 (760)
.++..|+|||.+....++.++|||||||++|||++ |+.|+...... ...... ..+.... ....
T Consensus 162 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~----~~~~~~~---------~~~~ 225 (256)
T cd05113 162 KFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS---ETVEKV----SQGLRLY---------RPHL 225 (256)
T ss_pred ccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHH----hcCCCCC---------CCCC
Confidence 45678999999988889999999999999999999 98888533221 111111 1111000 0011
Q ss_pred HHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 683 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
....+.+++.+||+.+|++||++.+|++.|+
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 226 ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 2356788999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-25 Score=237.26 Aligned_cols=207 Identities=27% Similarity=0.413 Sum_probs=154.7
Q ss_pred ccccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREE 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~ 565 (760)
.++|++.+.||+|+||.||++... .+..||||+++... ....+.+.+|+.+++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 457899999999999999999741 34579999987543 23346799999999999 79999999999999999
Q ss_pred eEEEEeccCCCChhhhh----------------------------------------------------ccccceeEecC
Q 004345 566 NMLIYEYMPNKSLDSFL----------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~ 593 (760)
.++||||+++|+|.+++ +|||+++.+..
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 193 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMN 193 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccC
Confidence 99999999999987653 38998876543
Q ss_pred CCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
...........++..|+|||.+....++.++|||||||++|||++ |..|+....... .. ......+..
T Consensus 194 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~--~~----~~~~~~~~~----- 262 (302)
T cd05055 194 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS--KF----YKLIKEGYR----- 262 (302)
T ss_pred CCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH--HH----HHHHHcCCc-----
Confidence 322111222345778999999999999999999999999999998 888875332211 01 111111100
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
..........+.+++.+|++.+|++|||+.||++.|++.
T Consensus 263 ----~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 263 ----MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 000111224678899999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-25 Score=233.11 Aligned_cols=206 Identities=25% Similarity=0.390 Sum_probs=151.2
Q ss_pred cccccccccccCCceeEEEEEec-CCc----EEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQ----EIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++|++.+.||+|+||.||+|... +++ .+++|.+..... ....++..|+.++++++||||+++++++. ....++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 45777899999999999999853 344 478888754322 23457888999999999999999999875 456789
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
++||+++|+|.+++ +|||+++.+......
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKK 165 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcc
Confidence 99999999998763 399999876433322
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......++..|+|||.+....++.++|||||||++|||++ |+.|+...... .... ....+.... .+.
T Consensus 166 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~---~~~~----~~~~~~~~~--~~~-- 234 (279)
T cd05111 166 YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH---EVPD----LLEKGERLA--QPQ-- 234 (279)
T ss_pred cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHHH----HHHCCCcCC--CCC--
Confidence 22233457789999999999999999999999999999998 99888533221 1111 111111110 111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
.....+.+++.+||+.||++|||+.|+++.|....+
T Consensus 235 -----~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 235 -----ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred -----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 112346778889999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.8e-25 Score=231.45 Aligned_cols=203 Identities=26% Similarity=0.433 Sum_probs=150.5
Q ss_pred cccccccccCCceeEEEEEecC----CcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe-----
Q 004345 497 FQLANKLGQGGFGPVYKGKLQD----GQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE----- 565 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~----- 565 (760)
|++.+.||+|+||.||+|.... +..||+|+++... ....+.+.+|++++++++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5677999999999999998642 3679999987532 2334679999999999999999999999876554
Q ss_pred -eEEEEeccCCCChhhhh--------------------------------------------------------ccccce
Q 004345 566 -NMLIYEYMPNKSLDSFL--------------------------------------------------------FDFGLA 588 (760)
Q Consensus 566 -~~lV~Ey~~~gsL~~~L--------------------------------------------------------~DFGla 588 (760)
.++|+||+++|+|..++ +|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 79999999999986542 399998
Q ss_pred eEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCc
Q 004345 589 RIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (760)
+................+..|+|||.+....++.++||||||+++|||++ |..|+...... ...... ..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~---~~~~~~----~~~~~ 233 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH---EIYDYL----RHGNR 233 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HcCCC
Confidence 87643322222222335678999999988889999999999999999999 88887532211 111111 11111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
.. .+......+.+++.+||+.||++|||+.||++.|+++
T Consensus 234 ~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 234 LK---------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC---------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 1112235678899999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-25 Score=229.73 Aligned_cols=197 Identities=25% Similarity=0.394 Sum_probs=145.6
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
+.||+|+||.||+|+.. +++.+|+|.+.... ......|.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 47999999999999964 78899999886432 33456799999999999999999999999999999999999999999
Q ss_pred hhhh---------------------------------------------------ccccceeEecCCCcccccceeeeec
Q 004345 579 DSFL---------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTY 607 (760)
Q Consensus 579 ~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~ 607 (760)
.+++ +|||+++................+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 160 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPV 160 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCce
Confidence 8763 3788876543211111111112345
Q ss_pred cccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHH
Q 004345 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIR 686 (760)
Q Consensus 608 ~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 686 (760)
.|+|||.+..+.++.++||||||+++|||++ |..|+....... . ....... .....+......
T Consensus 161 ~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~---~----~~~~~~~---------~~~~~~~~~~~~ 224 (252)
T cd05084 161 KWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ---T----REAIEQG---------VRLPCPELCPDA 224 (252)
T ss_pred eecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH---H----HHHHHcC---------CCCCCcccCCHH
Confidence 7999999999999999999999999999998 888875322211 0 0111010 000111122346
Q ss_pred HHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 687 CVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 687 ~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
+.+++.+|++.+|++|||+.+|.++|+
T Consensus 225 ~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 778999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-25 Score=237.23 Aligned_cols=210 Identities=26% Similarity=0.404 Sum_probs=156.1
Q ss_pred HHhccccccccccccCCceeEEEEEec------CCcEEEEEEeccc-CccchHhHHHHHHHHhcC-CCCccceeeeEEEe
Q 004345 491 ANATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKA-SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562 (760)
Q Consensus 491 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~ 562 (760)
....++|++.+.||+|+||.||++... ....+|+|.+... ..+...++.+|+.++.++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 344567888999999999999999853 2367999998753 223445789999999999 79999999999999
Q ss_pred CCeeEEEEeccCCCChhhhh------------------------------------------------------------
Q 004345 563 REENMLIYEYMPNKSLDSFL------------------------------------------------------------ 582 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~L------------------------------------------------------------ 582 (760)
++..++||||+++|+|..+|
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTE 167 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcC
Confidence 99999999999999886543
Q ss_pred ------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHH
Q 004345 583 ------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLL 655 (760)
Q Consensus 583 ------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~ 655 (760)
+|||+++.+.............++..|+|||.+....++.++|||||||++|||++ |..|+.......
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----- 242 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE----- 242 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH-----
Confidence 38888876543222222222335678999999988899999999999999999998 888875322111
Q ss_pred HHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 656 GYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 656 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.......+... ..+......+.+++.+|++.||++||||.++++.|++++
T Consensus 243 --~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 --LFKLLKEGYRM---------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred --HHHHHHcCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11111111110 111122356788999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-25 Score=242.83 Aligned_cols=210 Identities=26% Similarity=0.433 Sum_probs=154.2
Q ss_pred hccccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEeC-
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVER- 563 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~- 563 (760)
+.++|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|+.++.++ +|+||++++++|...
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 4467999999999999999999632 34789999987432 23345788999999999 899999999988654
Q ss_pred CeeEEEEeccCCCChhhh--------------------------------------------------------------
Q 004345 564 EENMLIYEYMPNKSLDSF-------------------------------------------------------------- 581 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~-------------------------------------------------------------- 581 (760)
...++++||+++++|.++
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 567899999999888532
Q ss_pred -------------------------------------------------hccccceeEecCCCcccccceeeeeccccCc
Q 004345 582 -------------------------------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSP 612 (760)
Q Consensus 582 -------------------------------------------------L~DFGla~~~~~~~~~~~~~~~~gt~~y~aP 612 (760)
|+|||+++.+.............++..||||
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 244 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 244 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence 1389988865433222223334567789999
Q ss_pred cccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHH
Q 004345 613 EYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVG 691 (760)
Q Consensus 613 E~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~ 691 (760)
|++....++.++|||||||++|||++ |..||......+ .+. .....+... ..+......+.+++
T Consensus 245 E~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~--~~~----~~~~~~~~~---------~~~~~~~~~~~~l~ 309 (337)
T cd05054 245 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE--EFC----RRLKEGTRM---------RAPEYATPEIYSIM 309 (337)
T ss_pred HHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH--HHH----HHHhccCCC---------CCCccCCHHHHHHH
Confidence 99999999999999999999999998 998885322111 111 111111110 00112235678899
Q ss_pred HhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 692 LLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 692 ~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
++||+.+|++||++.||+++|++++.
T Consensus 310 ~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 310 LDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.8e-25 Score=239.02 Aligned_cols=148 Identities=28% Similarity=0.405 Sum_probs=125.2
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.++|++.++||+|+||.||++... +++.+|+|.+.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367999999999999999999965 67889999886542 2334679999999999999999999999999999999999
Q ss_pred ccCCCChhhhh---------------------------------------------------ccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|+++|+|.++| +|||+++.+... ..
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~----~~ 159 (333)
T cd06650 84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MA 159 (333)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh----cc
Confidence 99999998763 388887654221 12
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 234688999999999988899999999999999999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-25 Score=234.72 Aligned_cols=213 Identities=24% Similarity=0.418 Sum_probs=151.9
Q ss_pred cccccccccccCCceeEEEEEe-----cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeC--CeeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-----QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~ 567 (760)
++|++.+.||+|+||.||++.. .+++.||+|++........+.|.+|++++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4688889999999999999974 25788999998766555567899999999999999999999987543 4678
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCc
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+|+||+++++|.+++ .|||+++.+.....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 163 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKE 163 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCc
Confidence 999999999998763 38998886643222
Q ss_pred cc-ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCC--------c
Q 004345 597 QA-ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN--------V 667 (760)
Q Consensus 597 ~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--------~ 667 (760)
.. ......++..|+|||.+.+..++.++|||||||+++||++|..++...... +. ....... +
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 164 YYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-------FM-RMMGNDKQGQMIVYHL 235 (284)
T ss_pred ceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-------hh-hhcccccccccchHHH
Confidence 11 111122345699999999889999999999999999999987765321110 00 0000000 0
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
.+.+...............+.+++.+||+.+|++||||.+|+++|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 011110000011111235678899999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-25 Score=239.45 Aligned_cols=200 Identities=22% Similarity=0.347 Sum_probs=155.1
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc----Cc-cchHhHHHHHHHHhcCC-CCccceeeeEEEeCCe
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA----SG-QGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREE 565 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~----~~-~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~ 565 (760)
..++|.+.+.||+|+||+|++|.. .++..||||.+++. .. ...+.+.+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 456899999999999999999984 46799999987653 12 23456778999999999 9999999999999999
Q ss_pred eEEEEeccCCCChhhhh---------------------------------------------------ccccceeEecCC
Q 004345 566 NMLIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGN 594 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~ 594 (760)
.++||||+.+|+|.++| +|||++....
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~-- 172 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP-- 172 (370)
T ss_pred EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC--
Confidence 99999999999998874 4999999763
Q ss_pred CcccccceeeeeccccCccccccCC-CC-ccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 595 QDQAATKRLVGTYGYMSPEYAMEGR-FS-EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
.........+||+.|+|||++.... |+ .++||||+||+||.|++|+.||+... ....... ...+..
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~------~~~l~~k-i~~~~~----- 240 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN------VPNLYRK-IRKGEF----- 240 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc------HHHHHHH-HhcCCc-----
Confidence 1223345679999999999999877 76 78999999999999999999997421 1111111 111110
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+..... ...+..++.+|++.||.+|+|+.+|++
T Consensus 241 -~~p~~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 241 -KIPSYLL---SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred -cCCCCcC---CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 0001010 356778889999999999999999993
|
|
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-25 Score=234.23 Aligned_cols=203 Identities=31% Similarity=0.472 Sum_probs=151.1
Q ss_pred ccccccccccCCceeEEEEEec------CCcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
+|++.++||+|+||.||+|... .++.||+|+++.... ...+.|.+|+.++.+++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4677899999999999999853 357899999975432 234678999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh------------------------------------------------------------------
Q 004345 569 IYEYMPNKSLDSFL------------------------------------------------------------------ 582 (760)
Q Consensus 569 V~Ey~~~gsL~~~L------------------------------------------------------------------ 582 (760)
++||+++++|..+|
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl 165 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKI 165 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEe
Confidence 99999988876542
Q ss_pred ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHh
Q 004345 583 FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKL 661 (760)
Q Consensus 583 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 661 (760)
+|||+++...............+++.|+|||.+....++.++||||||+++|||++ |..|+...... ... ..
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~----~~ 238 (283)
T cd05091 166 SDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---DVI----EM 238 (283)
T ss_pred cccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH---HHH----HH
Confidence 38998876543322222233456789999999998899999999999999999998 77777532211 111 11
Q ss_pred ccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 662 WNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 662 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
...+.... ........+.+++..||+.+|++||++.+|++.|+.
T Consensus 239 i~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 239 IRNRQVLP---------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHcCCcCC---------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11111111 111123457789999999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.1e-25 Score=228.76 Aligned_cols=206 Identities=25% Similarity=0.411 Sum_probs=156.0
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.++||+|+||.||+|+.. +++.||||.+... .......|.+|++++++++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57889999999999999999954 7899999987642 2233457899999999999999999999999999999999
Q ss_pred eccCCCChhhhh------------------------------------------------------ccccceeEecCCCc
Q 004345 571 EYMPNKSLDSFL------------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 571 Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~~ 596 (760)
||+++++|..++ +|||+++.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 999999986542 38888876543221
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
......++..|+|||.+....++.++||||||+++|||++|+.|+..... ........ ..... .+.+
T Consensus 162 --~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~~~~~~-~~~~~-----~~~~- 228 (267)
T cd08228 162 --AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLFSLCQK-IEQCD-----YPPL- 228 (267)
T ss_pred --HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc----cHHHHHHH-HhcCC-----CCCC-
Confidence 12234678899999999888899999999999999999999999853211 11111111 11111 0100
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
........+.+++.+||+.+|++||++.+|++.|+++
T Consensus 229 --~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 229 --PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred --ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1112235678889999999999999999999999765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-25 Score=230.41 Aligned_cols=206 Identities=27% Similarity=0.460 Sum_probs=153.1
Q ss_pred ccccccccccccCCceeEEEEEec-CC---cEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DG---QEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
.++|+..+.||+|+||.||+|+.. ++ ..+|+|.++... ....+++.+|++++++++||||+++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 346778899999999999999964 23 379999987542 3345679999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||||+++++|..++ +|||+++........
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 163 (268)
T cd05063 84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG 163 (268)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccccc
Confidence 99999999997663 389888765432211
Q ss_pred c-ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 598 A-ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 598 ~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
. .......+..|+|||.+....++.++|||||||++|||++ |+.|+...... ... .......
T Consensus 164 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~---~~~----~~i~~~~--------- 227 (268)
T cd05063 164 TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH---EVM----KAINDGF--------- 227 (268)
T ss_pred ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH---HHH----HHHhcCC---------
Confidence 1 1111223457999999998889999999999999999998 99998532221 111 1111110
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
...........+.+++.+||+.+|++||++.+|++.|+++
T Consensus 228 ~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0000111234678999999999999999999999999775
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.4e-25 Score=232.53 Aligned_cols=204 Identities=26% Similarity=0.432 Sum_probs=152.4
Q ss_pred cccccccccccCCceeEEEEEec------CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
.+|+..++||+|+||.||++... ++..+|+|.+........+.|.+|++++++++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45677899999999999999742 356899999876665666789999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh-----------------------------------------------------------------c
Q 004345 569 IYEYMPNKSLDSFL-----------------------------------------------------------------F 583 (760)
Q Consensus 569 V~Ey~~~gsL~~~L-----------------------------------------------------------------~ 583 (760)
|+||+++++|.++| .
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~ 164 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIG 164 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEEC
Confidence 99999999886432 3
Q ss_pred cccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhc
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLW 662 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 662 (760)
|||+++...............+++.|+|||.+....++.++|||||||++|||++ |+.|+....... ... ..
T Consensus 165 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~---~~- 237 (280)
T cd05092 165 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE---AIE---CI- 237 (280)
T ss_pred CCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH---HHH---HH-
Confidence 8888876533222122222345678999999999999999999999999999998 888875322211 111 11
Q ss_pred cCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 663 NDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 663 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
..+.... .+......+.+++.+||+.||++||++.+|++.|++
T Consensus 238 ~~~~~~~---------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 238 TQGRELE---------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HcCccCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1111000 011122456789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-25 Score=241.55 Aligned_cols=197 Identities=22% Similarity=0.312 Sum_probs=156.7
Q ss_pred cccccccccccCCceeEEEEE-ecCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
+-|++.+.||.|+-|.|-+|+ ..+|+.+|||++.+.. ......+.+|+.+|+-|.|||+++|+++++++.++|||.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 447788999999999999999 4689999999997652 223456789999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++|.|+++| +|||+|.+-.+ ....
T Consensus 92 Eyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~---gklL 168 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP---GKLL 168 (786)
T ss_pred EecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC---Cccc
Confidence 999999999884 49999987432 2334
Q ss_pred ceeeeeccccCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFS-EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s-~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
...||++.|.|||++.+.+|. .++||||.||+||.|+||+.||+.. .-..+...+ ..| ..++-
T Consensus 169 eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd---Nir~LLlKV----~~G-~f~MP-------- 232 (786)
T KOG0588|consen 169 ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD---NIRVLLLKV----QRG-VFEMP-------- 232 (786)
T ss_pred cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc---cHHHHHHHH----HcC-cccCC--------
Confidence 567999999999999999975 7999999999999999999999722 111222211 122 12221
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..-..++.+|+.+++..||+.|.|+.||++.
T Consensus 233 -s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 233 -SNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred -CcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 1223456778889999999999999999984
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-25 Score=233.42 Aligned_cols=208 Identities=25% Similarity=0.335 Sum_probs=155.7
Q ss_pred ccccccccccccCCceeEEEEEecC-----CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEe-CCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQD-----GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVE-REEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~-~~~~ 566 (760)
.++|++.+.||+|+||.||+|.... ++.|++|++.... ....+.+.+|+.++++++|+||+++++++.. +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678899999999999999999765 6889999987442 3345678999999999999999999999876 4678
Q ss_pred EEEEeccCCCChhhhh----------------------------------------------------------ccccce
Q 004345 567 MLIYEYMPNKSLDSFL----------------------------------------------------------FDFGLA 588 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L----------------------------------------------------------~DFGla 588 (760)
++++||+++++|..+| +|||++
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~ 164 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALS 164 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCc
Confidence 9999999999987653 288888
Q ss_pred eEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCc
Q 004345 589 RIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (760)
+.+.............++..|+|||.+....++.++||||||+++||+++ |+.|+..... ..+..+.. .+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~----~~~~ 237 (280)
T cd05043 165 RDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP---FEMAAYLK----DGYR 237 (280)
T ss_pred ccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH---HHHHHHHH----cCCC
Confidence 76533322222222345778999999998889999999999999999999 9999863321 11111111 1100
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
. .. .......+.+++.+||+.+|++|||+.+|+++|+.+.+
T Consensus 238 --~---~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 238 --L---AQ----PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred --C---CC----CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0 00 01112457789999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-25 Score=197.63 Aligned_cols=108 Identities=42% Similarity=0.940 Sum_probs=100.6
Q ss_pred eecCCCCCceeeecccccccccceeeeeeeCcCCeEEEEEEEeCCceE--EEEccCCcEEEEEecCCCCcEEEEEEecCC
Q 004345 212 WRSGPWNGRYFIGIPDMNSVYLDGFNLGEDHQKGTRYLTFAFADNDVF--FALTPQGNLEERAWVDGKAHLKIYFFYPTN 289 (760)
Q Consensus 212 w~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~G~l~~~~~~~~~~~w~~~~~~~~~ 289 (760)
||+|+|||..|+++|+|.....+.+.|+. ++.+.+++|...+.+++ ++||.+|+++++.|.+..+.|...|++|.+
T Consensus 1 wrsG~WnG~~f~g~p~~~~~~~~~~~fv~--~~~e~~~t~~~~~~s~~~r~~ld~~G~l~~~~w~~~~~~W~~~~~~p~d 78 (110)
T PF00954_consen 1 WRSGPWNGQRFSGIPEMSSNSLYNYSFVS--NNEEVYYTYSLSNSSVLSRLVLDSDGQLQRYIWNESTQSWSVFWSAPKD 78 (110)
T ss_pred CCccccCCeEECCcccccccceeEEEEEE--CCCeEEEEEecCCCceEEEEEEeeeeEEEEEEEecCCCcEEEEEEeccc
Confidence 89999999999999999977788888887 88999999998777655 999999999999999999999999999999
Q ss_pred CCcCCCccCCCccccCCCCCcccccCCCccCC
Q 004345 290 DCDVYGKCGAFGSCNSQKIPICSCLLGFEPKN 321 (760)
Q Consensus 290 ~C~~~~~CG~~g~C~~~~~~~C~C~~gf~~~~ 321 (760)
+||+|+.||+||+|+.+..+.|.|++||+|++
T Consensus 79 ~Cd~y~~CG~~g~C~~~~~~~C~Cl~GF~P~n 110 (110)
T PF00954_consen 79 QCDVYGFCGPNGICNSNNSPKCSCLPGFEPKN 110 (110)
T ss_pred CCCCccccCCccEeCCCCCCceECCCCcCCCc
Confidence 99999999999999888788999999999984
|
This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.3e-25 Score=234.26 Aligned_cols=209 Identities=28% Similarity=0.444 Sum_probs=154.6
Q ss_pred HhccccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE 564 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~ 564 (760)
...++|++.+.||+|+||.||+|... .+..||+|.++... ......+.+|+.++++++||||+++++++.+..
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 34678999999999999999999743 24579999886443 223456889999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhh------------------------------------------------------------cc
Q 004345 565 ENMLIYEYMPNKSLDSFL------------------------------------------------------------FD 584 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L------------------------------------------------------------~D 584 (760)
..++||||+++|+|.++| +|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~D 162 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD 162 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECc
Confidence 999999999999987653 38
Q ss_pred ccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhcc
Q 004345 585 FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWN 663 (760)
Q Consensus 585 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 663 (760)
||+++...............++..|+|||.+....++.++|||||||++|||++ |..|+.....+ ..... ..
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~---~~~~~----~~ 235 (288)
T cd05061 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---QVLKF----VM 235 (288)
T ss_pred CCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HH
Confidence 888775432222111222345678999999998899999999999999999999 67777532211 11111 11
Q ss_pred CCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 664 DNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 664 ~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.+.... .+......+.+++.+|++.+|++|||+.++++.|++.+
T Consensus 236 ~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 236 DGGYLD---------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred cCCCCC---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 111100 01112356888999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.3e-25 Score=228.24 Aligned_cols=199 Identities=30% Similarity=0.479 Sum_probs=150.6
Q ss_pred ccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
+|++.+.||+|+||.||++..+.+..+|+|.+.+. ....+.|.+|+.++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 47788999999999999999877788999998643 23456799999999999999999999999999999999999999
Q ss_pred CChhhhh---------------------------------------------------ccccceeEecCCCcccccceee
Q 004345 576 KSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKRLV 604 (760)
Q Consensus 576 gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 604 (760)
++|.+++ +|||+++........ ......
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~ 162 (256)
T cd05059 84 GCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-SSQGTK 162 (256)
T ss_pred CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccccc-ccCCCC
Confidence 9987753 388888765322111 111122
Q ss_pred eeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 605 gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
++..|+|||.+....++.++||||||+++|||++ |+.|+...... ...... ..+. .. ..+...
T Consensus 163 ~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~----~~~~-----~~----~~~~~~ 226 (256)
T cd05059 163 FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS---EVVESV----SAGY-----RL----YRPKLA 226 (256)
T ss_pred CCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH---HHHHHH----HcCC-----cC----CCCCCC
Confidence 3467999999999999999999999999999999 78887533221 111111 1110 00 011112
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVSML 712 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 712 (760)
...+.+++.+||+.+|++||||.+++++|
T Consensus 227 ~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 227 PTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 35688899999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=227.61 Aligned_cols=203 Identities=30% Similarity=0.452 Sum_probs=152.9
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.++|++.++||+|+||.||+|+..+...||+|+++... ...++|.+|+.++++++||||+++++++. ....++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence 45789999999999999999998777789999987532 34567999999999999999999999874 45679999999
Q ss_pred CCCChhhhh----------------------------------------------------ccccceeEecCCCcccccc
Q 004345 574 PNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 574 ~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++|+|.+++ +|||+++.+...... ...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~-~~~ 161 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQ 161 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccc-ccc
Confidence 999987653 388888765432211 112
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...++..|+|||......++.++||||||+++|||++ |+.|+...... .... .. ..+. .....
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~---~~~~---~~-~~~~---------~~~~~ 225 (262)
T cd05071 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLD---QV-ERGY---------RMPCP 225 (262)
T ss_pred CCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH---HHHH---HH-hcCC---------CCCCc
Confidence 2346678999999988899999999999999999999 77777532211 1111 11 0000 00111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
......+.+++.+|++.+|++||++.+++++|++.
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 226 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred cccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 22335678999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-24 Score=226.14 Aligned_cols=206 Identities=25% Similarity=0.408 Sum_probs=156.7
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+|... +++.||+|.++.. .....+.+.+|++++++++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999976 7899999988632 2233568999999999999999999999999999999999
Q ss_pred eccCCCChhhhh------------------------------------------------------ccccceeEecCCCc
Q 004345 571 EYMPNKSLDSFL------------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 571 Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~~ 596 (760)
||+++++|..++ +|||+++.+.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 999999997543 38888776532221
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
......++..|+|||.+....++.++|||||||++|||++|+.|+..... ....... ....+... + +
T Consensus 162 --~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~-~~~~~~~~----~-~- 228 (267)
T cd08224 162 --AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCK-KIEKCDYP----P-L- 228 (267)
T ss_pred --ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc----cHHHHHh-hhhcCCCC----C-C-
Confidence 12234678899999999988899999999999999999999999853221 1111111 11111110 0 0
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
........+.+++.+||+.+|++|||+.+|+++|+++
T Consensus 229 --~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 229 --PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred --ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 0112234677889999999999999999999999765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=227.04 Aligned_cols=202 Identities=32% Similarity=0.487 Sum_probs=152.0
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.++|++.++||+|+||.||+|..+++..+|+|.++... ...+.|.+|+.++++++|+||+++++++. ....+++|||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 35688889999999999999998888899999987543 24567999999999999999999999875 45689999999
Q ss_pred CCCChhhhh----------------------------------------------------ccccceeEecCCCcccccc
Q 004345 574 PNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 574 ~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++++|.+++ .|||+++.+...... ...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~ 161 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT-ARQ 161 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc-ccc
Confidence 999987652 388888765432211 111
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...++..|+|||.+....++.++||||||+++|||++ |+.|+...... ...... ..+. ....+
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~----~~~~---------~~~~~ 225 (260)
T cd05070 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR---EVLEQV----ERGY---------RMPCP 225 (260)
T ss_pred CCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHH----HcCC---------CCCCC
Confidence 2335678999999988889999999999999999999 88887532211 111111 1110 00111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
......+.+++.+|++.+|++|||+.++.+.|++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 226 QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1223467889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.2e-25 Score=232.03 Aligned_cols=205 Identities=29% Similarity=0.476 Sum_probs=152.7
Q ss_pred ccccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 566 (760)
.++|++.+.||+|+||.||++... ++..||+|.+.... ....++|.+|+.++++++||||+++++++..+...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467889999999999999999853 46789999987543 23456799999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhh----------------------------------------------------------------
Q 004345 567 MLIYEYMPNKSLDSFL---------------------------------------------------------------- 582 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L---------------------------------------------------------------- 582 (760)
++|+||+++|+|.++|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~ 163 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLV 163 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEe
Confidence 9999999999875442
Q ss_pred --------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCccccccc
Q 004345 583 --------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELT 653 (760)
Q Consensus 583 --------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~ 653 (760)
+|||+++.+..............+..|+|||.+....++.++|||||||++|||++ |..|+.....+
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~---- 239 (288)
T cd05050 164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE---- 239 (288)
T ss_pred cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----
Confidence 28888775432221111222334678999999998899999999999999999998 77777422211
Q ss_pred HHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 654 LLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
... .....+.... .+......+.+++.+|++.+|++|||+.|+++.|++
T Consensus 240 --~~~-~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 --EVI-YYVRDGNVLS---------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --HHH-HHHhcCCCCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111 1111221111 011123567889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-24 Score=224.88 Aligned_cols=196 Identities=27% Similarity=0.397 Sum_probs=147.8
Q ss_pred cccccCCceeEEEEEecCCcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCChh
Q 004345 501 NKLGQGGFGPVYKGKLQDGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLD 579 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~ 579 (760)
++||+|+||.||+|...+++.+|+|.++.... .....|.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 46899999999999988889999999875432 33457899999999999999999999999999999999999999987
Q ss_pred hhh---------------------------------------------------ccccceeEecCCCcccccceeeeecc
Q 004345 580 SFL---------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTYG 608 (760)
Q Consensus 580 ~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (760)
+++ .|||++......... ......++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~ 159 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-SSGLKQIPIK 159 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccc-cCCCCCCccc
Confidence 653 388887654322111 1111234568
Q ss_pred ccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHH
Q 004345 609 YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRC 687 (760)
Q Consensus 609 y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 687 (760)
|+|||++....++.++||||||+++||+++ |..||....... .......+... ..+......+
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-------~~~~~~~~~~~---------~~~~~~~~~~ 223 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-------AREQVEKGYRM---------SCPQKCPDDV 223 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-------HHHHHHcCCCC---------CCCCCCCHHH
Confidence 999999998899999999999999999998 888885332111 11111111100 0111123567
Q ss_pred HHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 688 VNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 688 ~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
.+++.+|++.+|++||++.+++++|.
T Consensus 224 ~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 224 YKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHcccCcccCCCHHHHHHHhc
Confidence 88999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=226.82 Aligned_cols=196 Identities=29% Similarity=0.426 Sum_probs=145.5
Q ss_pred ccccCCceeEEEEEe---cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCC
Q 004345 502 KLGQGGFGPVYKGKL---QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 502 ~lG~G~~g~Vy~~~~---~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
+||+|+||.||+|.+ .+++.+|+|+++... ....++|.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 689999999999974 357889999986443 234568999999999999999999999885 45678999999999
Q ss_pred Chhhhh--------------------------------------------------ccccceeEecCCCccc-ccceeee
Q 004345 577 SLDSFL--------------------------------------------------FDFGLARIFGGNQDQA-ATKRLVG 605 (760)
Q Consensus 577 sL~~~L--------------------------------------------------~DFGla~~~~~~~~~~-~~~~~~g 605 (760)
+|.+++ +|||+++......... ......+
T Consensus 81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 160 (257)
T cd05116 81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKW 160 (257)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCC
Confidence 997763 3899887654332211 1112234
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 684 (760)
++.|+|||.+....++.++|||||||++|||++ |+.||...... .... ....+.... .+....
T Consensus 161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~----~i~~~~~~~---------~~~~~~ 224 (257)
T cd05116 161 PVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN---EVTQ----MIESGERME---------CPQRCP 224 (257)
T ss_pred CccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHCCCCCC---------CCCCCC
Confidence 578999999988889999999999999999998 99998643221 1111 111111111 111123
Q ss_pred HHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 685 IRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 685 ~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
..+.+++.+||+.||++||++.+|+++|++
T Consensus 225 ~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 225 PEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 457789999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.5e-25 Score=229.82 Aligned_cols=205 Identities=25% Similarity=0.426 Sum_probs=151.0
Q ss_pred cccccccccccCCceeEEEEEecC-C---cEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQD-G---QEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
+.|++.+.||+|+||.||+|.... + ..||||.++.. .....++|.+|+.++++++||||+++++++..+...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 357788999999999999999642 2 36999998754 233456899999999999999999999999999999999
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
|||+++++|.+++ +|||+++.........
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 163 (269)
T cd05065 84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 163 (269)
T ss_pred EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcccc
Confidence 9999999997653 3888877553322111
Q ss_pred cccee---eeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 599 ATKRL---VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 599 ~~~~~---~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
..... ..+..|+|||.+....++.++|||||||++||+++ |..|+...... .......... ..
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~~~~---~~------- 230 (269)
T cd05065 164 TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIEQDY---RL------- 230 (269)
T ss_pred ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHHcCC---cC-------
Confidence 11111 12457999999999999999999999999999887 99888532211 1111111000 00
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
.........+.+++..||+.+|.+||++.+|+++|++.
T Consensus 231 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 231 ---PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00111224567899999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=227.09 Aligned_cols=202 Identities=33% Similarity=0.463 Sum_probs=153.2
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.++|++.++||+|+||.||+|..++++.||+|.+.... ...+.|.+|+.++++++|+||+++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 46788899999999999999998889999999987543 34568999999999999999999999864 56789999999
Q ss_pred CCCChhhhh----------------------------------------------------ccccceeEecCCCcccccc
Q 004345 574 PNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 574 ~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++++|.+++ .|||+++........ ...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-~~~ 161 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT-ARE 161 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc-ccc
Confidence 999997652 388888765422211 112
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...++..|+|||.+....++.++||||||++++||++ |+.||...... .... ....+... ...
T Consensus 162 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~----~~~~~~~~---------~~~ 225 (260)
T cd05067 162 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP---EVIQ----NLERGYRM---------PRP 225 (260)
T ss_pred CCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH---HHHH----HHHcCCCC---------CCC
Confidence 2345678999999988889999999999999999999 99998532211 1111 11111000 011
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
......+.+++.+|++.+|++||++++++..|+.
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 226 DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1122468889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.4e-25 Score=246.55 Aligned_cols=205 Identities=23% Similarity=0.277 Sum_probs=160.3
Q ss_pred hccccccccccccCCceeEEEEEecCC-cEEEEEEecccCccchHhHHHHHHHHhcCC-CCccceeeeE-EEe------C
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQDG-QEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLGC-CVE------R 563 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~-~~~------~ 563 (760)
...++++.+.|.+|||+.||++....+ ..+|+|++-..+....+...+|+++|++|+ |+|||.+++. ... .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 346778899999999999999997665 999999997667778889999999999997 9999999993 222 1
Q ss_pred CeeEEEEeccCCCChhhh------------------------------------------------------hcccccee
Q 004345 564 EENMLIYEYMPNKSLDSF------------------------------------------------------LFDFGLAR 589 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~------------------------------------------------------L~DFGla~ 589 (760)
-+.+|.||||++|+|-++ |||||-|.
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 367899999999999877 36999987
Q ss_pred EecCCCccc-------ccceeeeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHH
Q 004345 590 IFGGNQDQA-------ATKRLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAW 659 (760)
Q Consensus 590 ~~~~~~~~~-------~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~ 659 (760)
......... .......|+.|+|||.+. +..+++|+|||++||+||.|+....||+..
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s------------- 261 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES------------- 261 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC-------------
Confidence 432222110 011234689999999874 667999999999999999999999999621
Q ss_pred HhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 660 KLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 660 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
....+++....-...+....++.+|+..||++||++||++-||+..+.++.
T Consensus 262 ------g~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 262 ------GKLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA 312 (738)
T ss_pred ------cceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence 123344433333334567788999999999999999999999999887653
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-25 Score=234.52 Aligned_cols=195 Identities=19% Similarity=0.234 Sum_probs=150.2
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999965 68899999986432 234557889999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++|+|.+++ +|||+++..... .
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-----~ 155 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-----T 155 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-----c
Confidence 999999997763 399998765321 2
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....|++.|+|||++....++.++|||||||++|||++|+.||...... ... .....+.. .+ +
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~------~~~-~~i~~~~~------~~----~ 218 (291)
T cd05612 156 WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF------GIY-EKILAGKL------EF----P 218 (291)
T ss_pred ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHH-HHHHhCCc------CC----C
Confidence 2356899999999999888999999999999999999999998633211 111 11111110 01 1
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCC-----HHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPN-----MPTVVSM 711 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~~ 711 (760)
......+.+++.+||+.||.+||+ +.++++.
T Consensus 219 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 219 RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 111245678889999999999995 7777754
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-24 Score=228.68 Aligned_cols=211 Identities=27% Similarity=0.409 Sum_probs=154.3
Q ss_pred ccccccccccccCCceeEEEEEecC-----------------CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccce
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQD-----------------GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVR 555 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~ 555 (760)
.++|++.++||+|+||.||++.... +..||+|.+.... ....+.|.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578899999999999999998542 2468999987543 334668999999999999999999
Q ss_pred eeeEEEeCCeeEEEEeccCCCChhhhh-----------------------------------------------------
Q 004345 556 LLGCCVEREENMLIYEYMPNKSLDSFL----------------------------------------------------- 582 (760)
Q Consensus 556 l~g~~~~~~~~~lV~Ey~~~gsL~~~L----------------------------------------------------- 582 (760)
+++++..++..++|+||+++++|..+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili 163 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV 163 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee
Confidence 999999999999999999999886542
Q ss_pred --------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCCCcccccc
Q 004345 583 --------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS--GRKNTSFYHEEFEL 652 (760)
Q Consensus 583 --------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt--G~~p~~~~~~~~~~ 652 (760)
+|||+++.+.............+++.|||||.+....++.++|||||||++|||++ |..|+..... .
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~---~ 240 (296)
T cd05051 164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD---Q 240 (296)
T ss_pred cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh---H
Confidence 38888876543322222333456788999999998899999999999999999998 5566542221 1
Q ss_pred cHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 653 TLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
.........+.......... .+......+.+++.+|++.||++|||+.||++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 QVIENAGHFFRDDGRQIYLP------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHhccccccccccCC------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 12222222211111111110 11112356889999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.5e-25 Score=249.63 Aligned_cols=207 Identities=21% Similarity=0.301 Sum_probs=155.3
Q ss_pred HHHHhccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCC-
Q 004345 489 ELANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE- 564 (760)
Q Consensus 489 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~- 564 (760)
+.....++|++.+.||+|+||.||+++. .+++.||||++... .......+.+|+.++..++|+||+++++.+....
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 3344567999999999999999999984 57899999998643 2334567889999999999999999988775433
Q ss_pred -------eeEEEEeccCCCChhhhh------------------------------------------------------c
Q 004345 565 -------ENMLIYEYMPNKSLDSFL------------------------------------------------------F 583 (760)
Q Consensus 565 -------~~~lV~Ey~~~gsL~~~L------------------------------------------------------~ 583 (760)
..++||||+++|+|.++| +
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEE
Confidence 367999999999997542 3
Q ss_pred cccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN 663 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 663 (760)
|||+++.+.............||+.|||||++....++.++|||||||++|||++|+.||..... ........
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~------~~~~~~~~- 258 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM------EEVMHKTL- 258 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHh-
Confidence 99999876543322233456799999999999999999999999999999999999999863221 11111111
Q ss_pred CCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 664 DNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 664 ~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.+.. ++ + +......+.+++.+||+.||.+||++.++++.
T Consensus 259 ~~~~----~~-~----~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 259 AGRY----DP-L----PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred cCCC----CC-C----CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111 01 1 11123457788999999999999999999863
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-24 Score=226.46 Aligned_cols=204 Identities=24% Similarity=0.397 Sum_probs=151.5
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
++|++.+.||+|+||.||+|+. .+++.||+|++........+.+.+|+.++++++||||+++++++..++..++|+||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 4688899999999999999995 568899999987554455567889999999999999999999999999999999999
Q ss_pred CCCChhhhh--------------------------------------------------ccccceeEecCCCccccccee
Q 004345 574 PNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 574 ~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
++++|.+++ +|||+++.+.... ......
T Consensus 89 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~--~~~~~~ 166 (267)
T cd06646 89 GGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI--AKRKSF 166 (267)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc--cccCcc
Confidence 999997652 3899887653221 112235
Q ss_pred eeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 604 VGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 604 ~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
.++..|+|||.+. ...++.++|||||||++|||++|+.|+.......... ...... ...+.... .
T Consensus 167 ~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~-------~~~~~~---~~~~~~~~--~ 234 (267)
T cd06646 167 IGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-------LMSKSN---FQPPKLKD--K 234 (267)
T ss_pred ccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe-------eeecCC---CCCCCCcc--c
Confidence 6888999999884 4457889999999999999999999975322111000 000000 00111111 0
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 712 (760)
......+.+++.+||+.+|++|||+++|++.|
T Consensus 235 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 235 TKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred cccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 11224677889999999999999999998753
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=227.50 Aligned_cols=206 Identities=24% Similarity=0.385 Sum_probs=155.2
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||++.. .+++.+|||.+.... ....++|.+|+.++++++||||+++++++.+++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4678889999999999999995 578999999886432 233467999999999999999999999999999999999
Q ss_pred eccCCCChhhhh------------------------------------------------------ccccceeEecCCCc
Q 004345 571 EYMPNKSLDSFL------------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 571 Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~~ 596 (760)
||+++++|.+++ .|||++..+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence 999999987642 38888776532221
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
......++..|+|||.+....++.++||||||+++|||++|..|+.....+ ...... .. .....+.+.
T Consensus 162 --~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~-~~-----~~~~~~~~~ 229 (267)
T cd08229 162 --AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCK-KI-----EQCDYPPLP 229 (267)
T ss_pred --ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch----HHHHhh-hh-----hcCCCCCCC
Confidence 122346888999999999889999999999999999999999998532211 001100 00 011111111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
.......+.+++.+||+.+|++||||.+|++++.+.
T Consensus 230 ---~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 230 ---SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred ---cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 112234677888999999999999999999999765
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-25 Score=230.28 Aligned_cols=205 Identities=29% Similarity=0.446 Sum_probs=154.2
Q ss_pred ccccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 566 (760)
.++|++.+.||+|+||.||+|... .+..||+|.+.... ......+.+|+.+++.++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 457888999999999999999864 24689999986443 23345789999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhh------------------------------------------------------------cccc
Q 004345 567 MLIYEYMPNKSLDSFL------------------------------------------------------------FDFG 586 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L------------------------------------------------------------~DFG 586 (760)
++||||+++|+|.++| +|||
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg 164 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFG 164 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcc
Confidence 9999999999987542 3888
Q ss_pred ceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCC
Q 004345 587 LARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDN 665 (760)
Q Consensus 587 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (760)
+++.+.............++..|+|||.+....++.++|||||||++||+++ |..|+...... .... ....+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~~~~----~~~~~ 237 (277)
T cd05032 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE---EVLK----FVIDG 237 (277)
T ss_pred cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH---HHHH----HHhcC
Confidence 8875543322222233456789999999998889999999999999999998 88887532221 1111 11111
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 666 NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 666 ~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
..... .. .....+.+++.+||+.+|++|||+.++++.|++
T Consensus 238 ~~~~~-----~~----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 238 GHLDL-----PE----NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CCCCC-----CC----CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 11111 11 113567889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=229.17 Aligned_cols=212 Identities=27% Similarity=0.437 Sum_probs=151.5
Q ss_pred ccccccccccccCCceeEEEEEec-----------------CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccce
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-----------------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVR 555 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~ 555 (760)
.++|++.++||+|+||.||++... +...||+|++.... ....+.|.+|+.++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 357899999999999999998532 23469999987542 334568999999999999999999
Q ss_pred eeeEEEeCCeeEEEEeccCCCChhhhh-----------------------------------------------------
Q 004345 556 LLGCCVEREENMLIYEYMPNKSLDSFL----------------------------------------------------- 582 (760)
Q Consensus 556 l~g~~~~~~~~~lV~Ey~~~gsL~~~L----------------------------------------------------- 582 (760)
+++++...+..++||||+++++|..++
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili 163 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV 163 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE
Confidence 999999999999999999999886542
Q ss_pred --------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCCCcccccc
Q 004345 583 --------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS--GRKNTSFYHEEFEL 652 (760)
Q Consensus 583 --------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt--G~~p~~~~~~~~~~ 652 (760)
.|||+++.+.............++..|+|||....+.++.++|||||||++|||++ |..|+.......
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~-- 241 (296)
T cd05095 164 GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ-- 241 (296)
T ss_pred cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH--
Confidence 38888875532221111222344678999999888899999999999999999998 556664322211
Q ss_pred cHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 653 TLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
.................. + .+......+.+++.+||+.||++||+|.+|++.|++
T Consensus 242 -~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 -VIENTGEFFRDQGRQVYL-P-----KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -HHHHHHHHHhhccccccC-C-----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111111111111000000 0 011123567889999999999999999999998853
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=228.89 Aligned_cols=213 Identities=22% Similarity=0.296 Sum_probs=149.5
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.++||+|+||.||+|... +++.||+|+++... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56888999999999999999864 68899999987443 23345788999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+++ +|.+++ +|||+++....... ...
T Consensus 85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~--~~~ 161 (288)
T cd07871 85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK--TYS 161 (288)
T ss_pred CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc--ccc
Confidence 975 665542 49999986532221 122
Q ss_pred eeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHH-----HhccC----CCccccc
Q 004345 602 RLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAW-----KLWND----NNVIDLV 671 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~-----~~~~~----~~~~~~~ 671 (760)
...+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+......... ..+.. .......
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (288)
T cd07871 162 NEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYL 241 (288)
T ss_pred CceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccc
Confidence 3568999999999875 568999999999999999999999986433222111110000 00000 0000111
Q ss_pred cccccCCC----CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 672 DPLISESG----FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 672 d~~l~~~~----~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+...... .......+.+++.+|++.||.+|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 242 FPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11100000 0011245678899999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.3e-25 Score=237.71 Aligned_cols=194 Identities=22% Similarity=0.282 Sum_probs=150.3
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999965 68899999987532 234567899999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++|+|.++| +|||+++..... .
T Consensus 98 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-----~ 172 (329)
T PTZ00263 98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-----T 172 (329)
T ss_pred cCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC-----c
Confidence 999999997653 399999876322 1
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....||+.|+|||.+....++.++|||||||++|||++|+.||...... . .......+.. . +..
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~------~-~~~~i~~~~~-~-----~p~--- 236 (329)
T PTZ00263 173 FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF------R-IYEKILAGRL-K-----FPN--- 236 (329)
T ss_pred ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH------H-HHHHHhcCCc-C-----CCC---
Confidence 2357899999999999999999999999999999999999998532211 0 1111111111 0 011
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCC-----HHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPN-----MPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 710 (760)
....++.+++.+||+.||.+||+ +.++++
T Consensus 237 -~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 237 -WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred -CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 11235678889999999999997 577764
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.2e-25 Score=238.11 Aligned_cols=195 Identities=20% Similarity=0.326 Sum_probs=150.2
Q ss_pred cccccccccccCCceeEEEEEecC--CcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQD--GQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
++|++.+.||+|+||.||+|.... +..||+|++... .....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468889999999999999998543 368999998643 223456788999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||+++|+|.++| +|||+++.+...
T Consensus 110 ~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~----- 184 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR----- 184 (340)
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC-----
Confidence 9999999998763 399999875321
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....||+.|||||++.+..++.++|||||||++|||++|+.||...... . .......+.. .+...
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~----~~~~i~~~~~------~~p~~- 250 (340)
T PTZ00426 185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL---L----IYQKILEGII------YFPKF- 250 (340)
T ss_pred cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH---H----HHHHHhcCCC------CCCCC-
Confidence 22457899999999999888999999999999999999999998632211 0 1111111110 00111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCC-----CHHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRP-----NMPTVVSM 711 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~~ 711 (760)
....+.+++.+|++.||++|+ +++++++.
T Consensus 251 ---~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 251 ---LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ---CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 123466788899999999995 88888764
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-24 Score=224.68 Aligned_cols=198 Identities=25% Similarity=0.442 Sum_probs=152.8
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|++.+.||+|++|.||++... +++.|++|.+... .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777899999999999999964 6889999998643 334567899999999999999999999999999999999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+++++|.++| +|||+++.+..... ..
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~--~~ 158 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN--FA 158 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc--hh
Confidence 9999997763 38888876643221 12
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....|++.|+|||++....++.++||||||++++||++|+.|+...... ... ... ..+... ...
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~---~~~-~~~~~~---------~~~ 222 (256)
T cd08529 159 NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG---ALI---LKI-IRGVFP---------PVS 222 (256)
T ss_pred hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---HHH---HHH-HcCCCC---------CCc
Confidence 2346788999999999999999999999999999999999998643211 111 111 111110 011
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
......+.+++.+||+.+|++||+|.++++.
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 223 QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1223567889999999999999999999863
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-24 Score=229.33 Aligned_cols=209 Identities=22% Similarity=0.343 Sum_probs=143.6
Q ss_pred cccccccccccCCceeEEEEEec--CCcEEEEEEecccC--ccchHhHHHHHHHHhcC---CCCccceeeeEEEe-----
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ--DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNL---QHRNLVRLLGCCVE----- 562 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l---~H~nIv~l~g~~~~----- 562 (760)
++|++.+.||+|+||.||+|+.. .++.||||+++... ......+.+|+.+++++ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888999999999999999853 46789999986432 22334677888877665 69999999999863
Q ss_pred CCeeEEEEeccCCCChhhh----------------------------------------------------hccccceeE
Q 004345 563 REENMLIYEYMPNKSLDSF----------------------------------------------------LFDFGLARI 590 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~----------------------------------------------------L~DFGla~~ 590 (760)
....++||||++ ++|.++ |+|||+++.
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 346899999997 466443 249999987
Q ss_pred ecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc---CCCc
Q 004345 591 FGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN---DNNV 667 (760)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~---~~~~ 667 (760)
.... .......||+.|+|||.+....++.++|||||||++|||++|+.||......+. ......... ....
T Consensus 160 ~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~---~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 160 YSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ---LGKILDVIGLPGEEDW 233 (290)
T ss_pred ccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHH---HHHHHHHhCCCChhhc
Confidence 6432 223345789999999999988999999999999999999999999864332211 111111000 0000
Q ss_pred c---cccccccc--CCCC-----HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 668 I---DLVDPLIS--ESGF-----KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 668 ~---~~~d~~l~--~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. ......+. .... ......+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0 00000000 0000 011245668999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-24 Score=227.77 Aligned_cols=205 Identities=22% Similarity=0.355 Sum_probs=153.1
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.+.||+|+||.||++... +++.||+|++.... ....+.+.+|++++..++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46788899999999999999954 68899999886442 33457899999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+++++|..++ .|||++...... ...
T Consensus 85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~----~~~ 160 (284)
T cd06620 85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS----IAD 160 (284)
T ss_pred CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh----ccC
Confidence 9999997642 377776543211 112
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCccccc-----ccHHHHHHHhccCCCcccccccccc
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFE-----LTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
...|+..|+|||.+....++.++|||||||++|||++|+.||........ ............+. .+.+.
T Consensus 161 ~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 234 (284)
T cd06620 161 TFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------PPRLP 234 (284)
T ss_pred ccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc------CCCCC
Confidence 35689999999999888999999999999999999999999874332211 11111111111110 01111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHH
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 712 (760)
. ......+.+++.+|++.||++|||+.||+++.
T Consensus 235 ~---~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 235 S---SDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred c---hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0 11234577888999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-24 Score=228.39 Aligned_cols=212 Identities=22% Similarity=0.322 Sum_probs=147.8
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.++++++||||+++++++..+...++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999965 688999999875432 334567899999999999999999999999999999999
Q ss_pred ccCCCChhhh---------------------------------------------------hccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~~ 600 (760)
|++ ++|.++ |+|||+++...... ...
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~ 160 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS--HTY 160 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC--ccC
Confidence 996 455433 24999987643221 112
Q ss_pred ceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCC---cc-----ccc
Q 004345 601 KRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN---VI-----DLV 671 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~ 671 (760)
....+++.|+|||.+.+ ..++.++||||+||++|||++|+.||....+.. .............. .. ...
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (303)
T cd07869 161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ--DQLERIFLVLGTPNEDTWPGVHSLPHF 238 (303)
T ss_pred CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhCCCChhhccchhhcccc
Confidence 23567899999999865 458899999999999999999999996432211 11111111100000 00 000
Q ss_pred cc-ccc--CCCCH-------HHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 672 DP-LIS--ESGFK-------MEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 672 d~-~l~--~~~~~-------~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
++ ... ..... .....+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 239 KPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00 000 00000 01135678889999999999999999986
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-24 Score=224.89 Aligned_cols=201 Identities=26% Similarity=0.401 Sum_probs=142.9
Q ss_pred cccccCCceeEEEEEecC---CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCC
Q 004345 501 NKLGQGGFGPVYKGKLQD---GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~---~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
+.||+|+||.||+|...+ +..+|+|.++... ......|.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998643 4579999887543 234457999999999999999999999999999999999999999
Q ss_pred Chhhhh-------------------------------------------------------ccccceeEecCCCcccccc
Q 004345 577 SLDSFL-------------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 577 sL~~~L-------------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+|.++| +|||+++............
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD 160 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence 997652 3888886543222212222
Q ss_pred eeeeeccccCccccccC-------CCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 602 RLVGTYGYMSPEYAMEG-------RFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-------~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
...++..|+|||++... .++.++||||||+++|||++ |+.||......+. .... . .+......++
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~---~~~~---~-~~~~~~~~~~ 233 (269)
T cd05087 161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV---LTYT---V-REQQLKLPKP 233 (269)
T ss_pred CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH---HHHH---h-hcccCCCCCC
Confidence 34567889999998642 35789999999999999996 9999864332211 1111 0 1111112222
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
.+... ....+.+++..|+ .+|++|||+++|++.|+
T Consensus 234 ~~~~~----~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 234 RLKLP----LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ccCCC----CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 22111 1234667888898 58999999999999885
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-24 Score=225.15 Aligned_cols=198 Identities=31% Similarity=0.437 Sum_probs=152.5
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.++|++.+.||+|+||.||+|... ++.||+|.+..... ..+++.+|+.++++++|+||+++++++......++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 356788899999999999999875 78999999976543 5678999999999999999999999999999999999999
Q ss_pred CCCChhhhh----------------------------------------------------ccccceeEecCCCcccccc
Q 004345 574 PNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 574 ~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++++|.+++ .|||+++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~----- 157 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD----- 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccc-----
Confidence 999988753 27887775522111
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....+..|+|||.+....++.++||||||++++|+++ |+.|+...... .+.... ..+...+ .+
T Consensus 158 ~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~----~~~~~~~---------~~ 221 (256)
T cd05039 158 SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPHV----EKGYRME---------AP 221 (256)
T ss_pred cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHH----hcCCCCC---------Cc
Confidence 2234568999999998899999999999999999997 88887533211 111111 1110000 01
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
......+.+++.+|++.+|++|||+.+++++|++
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 222 EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 1123567789999999999999999999999965
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-24 Score=225.51 Aligned_cols=204 Identities=32% Similarity=0.470 Sum_probs=155.0
Q ss_pred hccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
..++|++.++||+|+||.||+|..++++.||||.+... ....+++.+|+.++++++|+||+++++++......++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 34678999999999999999999888889999998753 23457899999999999999999999999998999999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+++++|.+++ .|||+++.+..... ...
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~ 161 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY-TAR 161 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhh-hhh
Confidence 9999987653 38888876543211 111
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....+..|+|||.+.+..++.++||||||++++|+++ |+.|+...... ....... .+. . ...
T Consensus 162 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~~~~~----~~~-----~----~~~ 225 (261)
T cd05034 162 EGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR---EVLEQVE----RGY-----R----MPR 225 (261)
T ss_pred hccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHH----cCC-----C----CCC
Confidence 12234568999999998889999999999999999999 89887532211 1111111 000 0 000
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
+......+.+++.+|++.+|++||+++++++.|+.
T Consensus 226 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 226 PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 11113467889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-24 Score=228.49 Aligned_cols=201 Identities=21% Similarity=0.357 Sum_probs=154.0
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
..+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.++++++|+||+++++.+..+...++||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 35788899999999999999985 46889999999765555567899999999999999999999999999999999999
Q ss_pred cCCCChhhhh-------------------------------------------------ccccceeEecCCCccccccee
Q 004345 573 MPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 573 ~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
+++++|.+++ +|||+++....... .....
T Consensus 99 ~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~ 176 (296)
T cd06654 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTM 176 (296)
T ss_pred cCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc--ccCcc
Confidence 9999998763 38888775432221 11234
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
.+++.|+|||.+....++.++|||||||++|||++|+.||....... ......... . +.+ ..+...
T Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~------~~~~~~~~~-~-----~~~--~~~~~~ 242 (296)
T cd06654 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR------ALYLIATNG-T-----PEL--QNPEKL 242 (296)
T ss_pred cCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH------hHHHHhcCC-C-----CCC--CCcccc
Confidence 68889999999998889999999999999999999999986332211 000111110 0 000 011112
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.+++.+||+.+|++||++.+|++
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 243 SAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 245678889999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.8e-25 Score=237.64 Aligned_cols=209 Identities=26% Similarity=0.416 Sum_probs=151.4
Q ss_pred ccccccccccccCCceeEEEEEe------cCCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEeC-C
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVER-E 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~-~ 564 (760)
.++|++.+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|+.++.++ +||||++++++|... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 46789999999999999999973 356789999997533 23346788999999999 689999999988654 4
Q ss_pred eeEEEEeccCCCChhhhh--------------------------------------------------------------
Q 004345 565 ENMLIYEYMPNKSLDSFL-------------------------------------------------------------- 582 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L-------------------------------------------------------------- 582 (760)
..++||||+++|+|.++|
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 578999999999885321
Q ss_pred -------------------------------------------------------ccccceeEecCCCcccccceeeeec
Q 004345 583 -------------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTY 607 (760)
Q Consensus 583 -------------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~ 607 (760)
+|||+++...............++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 245 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCc
Confidence 3788877543222222222234567
Q ss_pred cccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHH
Q 004345 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIR 686 (760)
Q Consensus 608 ~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 686 (760)
.|+|||.+....++.++||||||+++|||++ |..|+....... .. ......+..... .. .....
T Consensus 246 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~----~~~~~~~~~~~~-----~~----~~~~~ 310 (343)
T cd05103 246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EF----CRRLKEGTRMRA-----PD----YTTPE 310 (343)
T ss_pred ceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH--HH----HHHHhccCCCCC-----CC----CCCHH
Confidence 8999999998899999999999999999997 888875322111 01 111111111100 00 11235
Q ss_pred HHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 687 CVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 687 ~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
+.+++..||+.+|++|||+.+|++.|+.+.+
T Consensus 311 ~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 311 MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 7889999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-24 Score=226.57 Aligned_cols=202 Identities=26% Similarity=0.421 Sum_probs=147.6
Q ss_pred ccccccccCCceeEEEEEecCC-c--EEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeC------Cee
Q 004345 498 QLANKLGQGGFGPVYKGKLQDG-Q--EIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER------EEN 566 (760)
Q Consensus 498 ~~~~~lG~G~~g~Vy~~~~~~~-~--~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~------~~~ 566 (760)
.+.++||+|+||.||+|+.... . .+|+|.++.. .....+.|.+|++++++++|+||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 4568999999999999996543 2 5899988653 234456799999999999999999999988542 246
Q ss_pred EEEEeccCCCChhhhh--------------------------------------------------------ccccceeE
Q 004345 567 MLIYEYMPNKSLDSFL--------------------------------------------------------FDFGLARI 590 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L--------------------------------------------------------~DFGla~~ 590 (760)
++|+||+++|+|..++ +|||+++.
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccc
Confidence 8999999999986542 39999887
Q ss_pred ecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccc
Q 004345 591 FGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVID 669 (760)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (760)
+.............+++.|+|||......++.++||||||+++|||++ |+.|+..... ..+. .....+....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~----~~~~~~~~~~ 234 (272)
T cd05075 162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN---SEIY----DYLRQGNRLK 234 (272)
T ss_pred cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHH----HHHHcCCCCC
Confidence 643222111222345678999999999999999999999999999999 7888753221 1111 1111211111
Q ss_pred cccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 670 LVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 670 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
. .......+.+++.+||+.||++|||+.+|++.|+++
T Consensus 235 ~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 235 Q---------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred C---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 111224577899999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-24 Score=223.71 Aligned_cols=201 Identities=28% Similarity=0.503 Sum_probs=152.2
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
.+|++.+.||+|+||.||++...++..+|+|.+... ......|.+|++++++++||||+++++++......++|+||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 467788999999999999999877889999988643 2345679999999999999999999999999999999999999
Q ss_pred CCChhhhh---------------------------------------------------ccccceeEecCCCccccccee
Q 004345 575 NKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 575 ~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
+++|.+++ +|||+++....... ......
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~~~~~ 161 (256)
T cd05112 83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-TSSTGT 161 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcc-cccCCC
Confidence 99987653 38888775532211 111123
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 682 (760)
.++.+|+|||.+....++.++||||||+++|||++ |+.|+...... .+.. ....+ .....+.+
T Consensus 162 ~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~~----~~~~~--~~~~~~~~------- 225 (256)
T cd05112 162 KFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS---EVVE----TINAG--FRLYKPRL------- 225 (256)
T ss_pred ccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH---HHHH----HHhCC--CCCCCCCC-------
Confidence 35678999999998899999999999999999998 88887532211 1111 11111 01111111
Q ss_pred HHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 683 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
....+.+++.+||+.+|++|||+.+|+++|.
T Consensus 226 ~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 226 ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1256888999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-24 Score=226.54 Aligned_cols=205 Identities=26% Similarity=0.470 Sum_probs=152.5
Q ss_pred cccccccccccCCceeEEEEEec----CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ----DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
++|++.+.||+|+||.||+|... ....+|+|.++... ....+.|.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 56888899999999999999853 23479999987532 23456899999999999999999999999999999999
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
|||+++++|.+++ +|||+++.+.......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 163 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccccee
Confidence 9999999987763 3888887654322111
Q ss_pred -ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 599 -ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 599 -~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
......++..|+|||.+....++.++||||||+++||+++ |..|+...... ...... .++. .. +
T Consensus 164 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~---~~~~~~----~~~~--~~--~--- 229 (267)
T cd05066 164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ---DVIKAI----EEGY--RL--P--- 229 (267)
T ss_pred eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH---HHHHHH----hCCC--cC--C---
Confidence 1111223568999999998899999999999999999887 99998533221 111111 1110 00 0
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
........+.+++.+|++.+|++||+|.++++.|++.
T Consensus 230 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 230 --APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0111234567899999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-24 Score=223.09 Aligned_cols=197 Identities=27% Similarity=0.428 Sum_probs=147.8
Q ss_pred cccccCCceeEEEEEecCCcEEEEEEecccCcc-chHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCChh
Q 004345 501 NKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQ-GQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLD 579 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~ 579 (760)
++||+|+||.||++...+++.||+|++...... ..+.|.+|++++++++|+||+++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 479999999999999877999999998754333 5568999999999999999999999999999999999999999987
Q ss_pred hhh---------------------------------------------------ccccceeEecCCCcccccceeeeecc
Q 004345 580 SFL---------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTYG 608 (760)
Q Consensus 580 ~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (760)
++| +|||+++................+..
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~ 160 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIK 160 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceec
Confidence 653 37888775432211111112234567
Q ss_pred ccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHH
Q 004345 609 YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRC 687 (760)
Q Consensus 609 y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 687 (760)
|+|||.+....++.++|||||||+++||++ |..|+....... ... ...... ....+......+
T Consensus 161 y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~---~~~----~~~~~~---------~~~~~~~~~~~~ 224 (251)
T cd05041 161 WTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ---TRE----RIESGY---------RMPAPQLCPEEI 224 (251)
T ss_pred cCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH---HHH----HHhcCC---------CCCCCccCCHHH
Confidence 999999988899999999999999999999 777775332211 111 010100 000111123467
Q ss_pred HHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 688 VNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 688 ~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
.+++.+|++.+|++|||+.||++.|+
T Consensus 225 ~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 225 YRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHhccChhhCcCHHHHHHHhh
Confidence 88999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-24 Score=232.31 Aligned_cols=207 Identities=26% Similarity=0.390 Sum_probs=151.5
Q ss_pred ccccccccccccCCceeEEEEEec--------CCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEeC
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ--------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVER 563 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~ 563 (760)
.++|.+.+.||+|+||.||++... +...+|+|.++... .....++.+|+.++.++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 467999999999999999999742 23569999987542 33456788999999999 799999999999999
Q ss_pred CeeEEEEeccCCCChhhhh-------------------------------------------------------------
Q 004345 564 EENMLIYEYMPNKSLDSFL------------------------------------------------------------- 582 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L------------------------------------------------------------- 582 (760)
+..++||||+++|+|.++|
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~ 176 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 176 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC
Confidence 9999999999998875432
Q ss_pred -----ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHH
Q 004345 583 -----FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLG 656 (760)
Q Consensus 583 -----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~ 656 (760)
+|||+++...............+++.|||||.+.+..++.++|||||||++|||++ |..|+.....+ .
T Consensus 177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~------~ 250 (307)
T cd05098 177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE------E 250 (307)
T ss_pred CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH------H
Confidence 37777765432211111112234568999999998889999999999999999998 77887532211 1
Q ss_pred HHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 657 YAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 657 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.......+...+ .+......+.+++.+|++.+|++||||.+|++.|++++
T Consensus 251 -~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 251 -LFKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred -HHHHHHcCCCCC---------CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 111111111101 11112346778899999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=230.88 Aligned_cols=203 Identities=20% Similarity=0.278 Sum_probs=152.0
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
..++|+++++||+|+||.||+++. .+|..+|+|++++.. ....+..+.|-.+|...++|.||+|+-.|.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 457899999999999999999995 478999999998753 3455678899999999999999999999999999999
Q ss_pred EEeccCCCChhhhh--------------------------------------------------ccccceeEecCCC---
Q 004345 569 IYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQ--- 595 (760)
Q Consensus 569 V~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~--- 595 (760)
||||+|||++..+| +||||++-+....
T Consensus 219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~ 298 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE 298 (550)
T ss_pred EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhh
Confidence 99999999987764 4999986432100
Q ss_pred ------------------ccc------------------------ccceeeeeccccCccccccCCCCccchhHHHHHHH
Q 004345 596 ------------------DQA------------------------ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLL 633 (760)
Q Consensus 596 ------------------~~~------------------------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l 633 (760)
+.. .....+|||-|||||++.+..|+..+|.||+|||+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Im 378 (550)
T KOG0605|consen 299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIM 378 (550)
T ss_pred hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHH
Confidence 000 00125799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCcccccc-cHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCC---HHHHH
Q 004345 634 LEIVSGRKNTSFYHEEFEL-TLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPN---MPTVV 709 (760)
Q Consensus 634 ~ElltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt---~~ev~ 709 (760)
||||.|.+||......... .+..|-.... .........+..+++.+|+- ||++|.- +.||-
T Consensus 379 yEmLvGyPPF~s~tp~~T~rkI~nwr~~l~--------------fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK 443 (550)
T KOG0605|consen 379 YEMLVGYPPFCSETPQETYRKIVNWRETLK--------------FPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIK 443 (550)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhhhcc--------------CCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence 9999999999754433211 1222211110 00011112556677778887 9999965 55554
Q ss_pred H
Q 004345 710 S 710 (760)
Q Consensus 710 ~ 710 (760)
+
T Consensus 444 ~ 444 (550)
T KOG0605|consen 444 K 444 (550)
T ss_pred c
Confidence 4
|
|
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-24 Score=229.00 Aligned_cols=210 Identities=22% Similarity=0.294 Sum_probs=149.8
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.++||+|+||.||++... ++..+|+|.+.... ....+++.+|++++.+++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46888999999999999999854 67889999886432 23345789999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+++++|.+++ +|||+++..... ...
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----~~~ 156 (308)
T cd06615 81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 156 (308)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc----ccc
Confidence 9999997763 267766543211 122
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCC---------------
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN--------------- 666 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------- 666 (760)
...++..|+|||.+.+..++.++||||||+++|||++|+.|+....... .............
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (308)
T cd06615 157 SFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE---LEAMFGRPVSEGEAKESHRPVSGHPPDS 233 (308)
T ss_pred cCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh---HHHhhcCccccccccCCcccccCCCCCc
Confidence 3467899999999988889999999999999999999999985322111 1110000000000
Q ss_pred -----ccccccccccC---CCC-HHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 667 -----VIDLVDPLISE---SGF-KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 667 -----~~~~~d~~l~~---~~~-~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+..+..... ..+ ......+.+++.+||+.+|++|||+.+|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 234 PRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred cchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000 000 0112357789999999999999999999875
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-24 Score=229.55 Aligned_cols=219 Identities=26% Similarity=0.423 Sum_probs=154.0
Q ss_pred ccccccccccCCceeEEEEEec-----CCcEEEEEEecccCcc-chHhHHHHHHHHhcCCCCccceeeeEEEe--CCeeE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-----DGQEIAVKRLSKASGQ-GQEEFMNEVMVISNLQHRNLVRLLGCCVE--REENM 567 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~nIv~l~g~~~~--~~~~~ 567 (760)
.|++.+.||+|+||.||+++.. .++.+|||.+...... ..+.|.+|++++++++|+||+++++++.. +...+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4677799999999999999853 3678999999755432 46789999999999999999999999987 55789
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCc
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+||||+++++|.+++ +|||++........
T Consensus 85 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 164 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKD 164 (284)
T ss_pred EEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCc
Confidence 999999999998763 38888876642222
Q ss_pred c-cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 Q-AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 ~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
. .......++..|+|||.+....++.++||||||++++||++|+.|+........ ................+.+....
T Consensus 165 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
T cd05038 165 YYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFL-RMIGIAQGQMIVTRLLELLKEGE 243 (284)
T ss_pred ceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhc-cccccccccccHHHHHHHHHcCC
Confidence 1 111122345679999999988999999999999999999999988753221110 00000000000000001111111
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
....+......+.+++.+||+.+|++||||.||+++|+++
T Consensus 244 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 244 RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1111112235688899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=234.09 Aligned_cols=189 Identities=20% Similarity=0.245 Sum_probs=142.3
Q ss_pred cccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 503 LGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 503 lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
||+|+||.||+++.. +++.||+|++++. .......+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999964 5789999998743 234456788999999999999999999999999999999999999999
Q ss_pred hhhh--------------------------------------------------ccccceeEecCCCcccccceeeeecc
Q 004345 579 DSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTYG 608 (760)
Q Consensus 579 ~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (760)
.++| +|||+++...... .......||+.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~ 158 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNTFCGTPE 158 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--CccccccCCcc
Confidence 7653 3999987543222 12234679999
Q ss_pred ccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHH
Q 004345 609 YMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCV 688 (760)
Q Consensus 609 y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 688 (760)
|+|||.+.+..++.++|||||||++|||++|+.||..... .......... .. .+.. .....+.
T Consensus 159 y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~------~~~~~~~~~~-~~------~~~~----~~~~~~~ 221 (312)
T cd05585 159 YLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV------NEMYRKILQE-PL------RFPD----GFDRDAK 221 (312)
T ss_pred cCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH------HHHHHHHHcC-CC------CCCC----cCCHHHH
Confidence 9999999999999999999999999999999999863221 1111111111 00 0111 1124567
Q ss_pred HHHHhcccCCcCCCCCHHHHHH
Q 004345 689 NVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 689 ~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+++.+||+.||++||++.++.+
T Consensus 222 ~li~~~L~~dp~~R~~~~~~~e 243 (312)
T cd05585 222 DLLIGLLSRDPTRRLGYNGAQE 243 (312)
T ss_pred HHHHHHcCCCHHHcCCCCCHHH
Confidence 7888999999999986443333
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-24 Score=235.64 Aligned_cols=215 Identities=17% Similarity=0.280 Sum_probs=146.4
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCC-----eeE
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE-----ENM 567 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~-----~~~ 567 (760)
+|++.++||+|+||.||+|+. .+++.||||++... .......+.+|+.++++++||||+++++++.... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 578889999999999999995 46899999998743 2233457899999999999999999999986543 479
Q ss_pred EEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcc
Q 004345 568 LIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
+||||++ ++|.+++ +|||+++........
T Consensus 81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 159 (338)
T cd07859 81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 159 (338)
T ss_pred EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence 9999996 5676542 499999864322111
Q ss_pred -cccceeeeeccccCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH--------HHhccCCC
Q 004345 598 -AATKRLVGTYGYMSPEYAME--GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA--------WKLWNDNN 666 (760)
Q Consensus 598 -~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~--------~~~~~~~~ 666 (760)
.......||..|+|||++.. ..++.++|||||||++|||++|+.||............... ...+....
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 239 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK 239 (338)
T ss_pred cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence 11234578999999999875 67899999999999999999999998643221111000000 00000000
Q ss_pred ccccccc---cccCCC---CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 667 VIDLVDP---LISESG---FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 667 ~~~~~d~---~l~~~~---~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+.++. ...... .......+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000000 000000 00112456789999999999999999999873
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.7e-24 Score=226.80 Aligned_cols=200 Identities=23% Similarity=0.363 Sum_probs=154.1
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
++|++.+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 6788999999999999999995 578999999997655555677899999999999999999999999999999999999
Q ss_pred CCCChhhhh-------------------------------------------------ccccceeEecCCCcccccceee
Q 004345 574 PNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRLV 604 (760)
Q Consensus 574 ~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 604 (760)
++++|.+++ +|||++......... .....
T Consensus 99 ~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~--~~~~~ 176 (297)
T cd06656 99 AGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMV 176 (297)
T ss_pred CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC--cCccc
Confidence 999997652 399988765433211 22346
Q ss_pred eeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHH
Q 004345 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684 (760)
Q Consensus 605 gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 684 (760)
+++.|+|||.+....++.++|||||||++|||++|+.||.......... .....+ .+.+ ..+....
T Consensus 177 ~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------~~~~~~------~~~~--~~~~~~~ 242 (297)
T cd06656 177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNG------TPEL--QNPERLS 242 (297)
T ss_pred CCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee------eeccCC------CCCC--CCccccC
Confidence 7889999999998889999999999999999999999985332211100 000000 0000 0111122
Q ss_pred HHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 685 IRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 685 ~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..+.+++.+||+.+|++||++.+|++
T Consensus 243 ~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 243 AVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 44667889999999999999999988
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-24 Score=231.12 Aligned_cols=207 Identities=25% Similarity=0.384 Sum_probs=153.7
Q ss_pred ccccccccccccCCceeEEEEEec--------CCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEeC
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ--------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVER 563 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~ 563 (760)
.++|++.+.||+|+||.||+++.. ++..||+|.+.... ....+++.+|+.++..+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456888899999999999999731 24579999987432 34456799999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChhhhh-------------------------------------------------------------
Q 004345 564 EENMLIYEYMPNKSLDSFL------------------------------------------------------------- 582 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L------------------------------------------------------------- 582 (760)
...++||||+++|+|.++|
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~ 173 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN 173 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC
Confidence 9999999999999886542
Q ss_pred -----ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHH
Q 004345 583 -----FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLG 656 (760)
Q Consensus 583 -----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~ 656 (760)
+|||+++.+.............+++.|+|||.+....++.++||||||+++|||++ |..|+...... .
T Consensus 174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~ 247 (304)
T cd05101 174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE------E 247 (304)
T ss_pred CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH------H
Confidence 38888876643322222223345678999999998889999999999999999998 77776432111 1
Q ss_pred HHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 657 YAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 657 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
... ....+.... .+......+.+++.+||+.+|++||||.||++.|++++
T Consensus 248 ~~~-~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 248 LFK-LLKEGHRMD---------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred HHH-HHHcCCcCC---------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 111 111111100 01112345778899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-24 Score=227.81 Aligned_cols=198 Identities=24% Similarity=0.383 Sum_probs=150.4
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++..+...++|+||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4667789999999999999864 57889999987442 334567999999999999999999999999999999999999
Q ss_pred CCCChhhhh-------------------------------------------------ccccceeEecCCCcccccceee
Q 004345 574 PNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRLV 604 (760)
Q Consensus 574 ~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 604 (760)
++++|.+++ .|||+++.+.... .......
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--~~~~~~~ 162 (277)
T cd06642 85 GGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNTFV 162 (277)
T ss_pred CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc--hhhhccc
Confidence 999987653 3888887653221 1122345
Q ss_pred eeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHH
Q 004345 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684 (760)
Q Consensus 605 gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 684 (760)
++..|+|||.+....++.++|||||||++|||++|+.|+....... .. . ...... .+.+. ....
T Consensus 163 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~---~-~~~~~~-----~~~~~----~~~~ 226 (277)
T cd06642 163 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR---VL---F-LIPKNS-----PPTLE----GQYS 226 (277)
T ss_pred CcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh---HH---h-hhhcCC-----CCCCC----cccC
Confidence 7889999999998899999999999999999999999975322111 00 0 000110 11111 1223
Q ss_pred HHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 685 IRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 685 ~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+.+++.+||+.+|++||+|.+|++.
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 227 KPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 457788999999999999999999984
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >smart00108 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.4e-24 Score=191.81 Aligned_cols=113 Identities=42% Similarity=0.707 Sum_probs=98.6
Q ss_pred CcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEEEcCCCCE
Q 004345 31 QFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQV 110 (760)
Q Consensus 31 ~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l~d~~~~~ 110 (760)
+.|..++.|+|+++.|++|||.+. .+..+++|||+.. + +++||+|||+.|+.. ++.|.|+.||+|+|.|.+|.+
T Consensus 2 ~~l~~~~~l~s~~~~f~~G~~~~~--~q~dgnlV~~~~~--~-~~~vW~snt~~~~~~-~~~l~l~~dGnLvl~~~~g~~ 75 (114)
T smart00108 2 NTLSSGQTLVSGNSLFELGFFTLI--MQNDYNLILYKSS--S-RTVVWVANRDNPVSD-SCTLTLQSDGNLVLYDGDGRV 75 (114)
T ss_pred cccCCCCEEecCCCcEeeeccccC--CCCCEEEEEEECC--C-CcEEEECCCCCCCCC-CEEEEEeCCCCEEEEeCCCCE
Confidence 467889999999999999999986 3568999999985 4 789999999999764 488999999999999999999
Q ss_pred EEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCC
Q 004345 111 HWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQE 152 (760)
Q Consensus 111 vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~ 152 (760)
+|+|++... .+..+|+|+|+|||||++. .+.+|||||||
T Consensus 76 vW~S~t~~~--~~~~~~~L~ddGnlvl~~~-~~~~~W~Sf~~ 114 (114)
T smart00108 76 VWSSNTTGA--NGNYVLVLLDDGNLVIYDS-DGNFLWQSFDY 114 (114)
T ss_pred EEEecccCC--CCceEEEEeCCCCEEEECC-CCCEEeCCCCC
Confidence 999998622 2467899999999999998 46789999997
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.7e-24 Score=223.75 Aligned_cols=198 Identities=23% Similarity=0.313 Sum_probs=152.9
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4677789999999999999964 57899999987442 344567999999999999999999999999999999999999
Q ss_pred CCCChhhhh-------------------------------------------------ccccceeEecCCCcccccceee
Q 004345 574 PNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRLV 604 (760)
Q Consensus 574 ~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 604 (760)
++++|.+++ +|||++..+..... ......
T Consensus 85 ~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~ 162 (277)
T cd06640 85 GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KRNTFV 162 (277)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc--cccccc
Confidence 999988763 38998876643221 122346
Q ss_pred eeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHH
Q 004345 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684 (760)
Q Consensus 605 gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 684 (760)
++..|+|||.+....++.++|||||||++|||++|..|+........ . .. +.............
T Consensus 163 ~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~---~----~~---------~~~~~~~~~~~~~~ 226 (277)
T cd06640 163 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV---L----FL---------IPKNNPPTLTGEFS 226 (277)
T ss_pred CcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH---h----hh---------hhcCCCCCCchhhh
Confidence 78899999999988899999999999999999999999853221110 0 00 00000111222344
Q ss_pred HHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 685 IRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 685 ~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+.+++.+||+.+|++||++.++++.
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 227 KPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 567889999999999999999999774
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-24 Score=226.56 Aligned_cols=205 Identities=24% Similarity=0.400 Sum_probs=151.6
Q ss_pred cccccccccccCCceeEEEEEe-cCCc----EEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQ----EIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++|++.++||+|+||.||+|+. .+++ .||+|.++... ....+++.+|+.+++.++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 5678889999999999999984 3444 48999987542 3345678999999999999999999999975 45789
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
++||+++|+|.+++ +|||+++........
T Consensus 86 ~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~ 165 (279)
T cd05109 86 VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 165 (279)
T ss_pred EEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccce
Confidence 99999999987763 399999876433222
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......++..|+|||.+....++.++|||||||++|||++ |..|+...... .+..... .+....
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~~----~~~~~~------- 231 (279)
T cd05109 166 YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---EIPDLLE----KGERLP------- 231 (279)
T ss_pred eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHH----CCCcCC-------
Confidence 11222334678999999998899999999999999999998 88887532211 1111111 111000
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.+......+.+++.+||+.||++||++.++++.|+.+.
T Consensus 232 --~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05109 232 --QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMA 269 (279)
T ss_pred --CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 01112345678899999999999999999999997764
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-24 Score=234.16 Aligned_cols=191 Identities=22% Similarity=0.272 Sum_probs=145.6
Q ss_pred cccccCCceeEEEEEe-cCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCC
Q 004345 501 NKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
+.||+|+||.||+++. .+++.||||++++.. ......+.+|+.++++++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 468899999997532 233457889999999999999999999999999999999999999
Q ss_pred Chhhhh--------------------------------------------------ccccceeEecCCCcccccceeeee
Q 004345 577 SLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVGT 606 (760)
Q Consensus 577 sL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt 606 (760)
+|..++ +|||+++...... .......||
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt 158 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGT 158 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--CcccceecC
Confidence 997652 3999987532111 122346799
Q ss_pred ccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHH
Q 004345 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIR 686 (760)
Q Consensus 607 ~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 686 (760)
+.|||||++....++.++|||||||++|||++|+.||.....+ .+... . ..+.. .+. ......
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~---~~~~~---~-~~~~~------~~p----~~~~~~ 221 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFEL---I-LMEEI------RFP----RTLSPE 221 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH---HHHHH---H-HcCCC------CCC----CCCCHH
Confidence 9999999999999999999999999999999999998532211 11111 1 01110 111 112245
Q ss_pred HHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 687 CVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 687 ~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
+.+++.+||+.||++|| ++.++++
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 222 AKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 67788899999999999 7888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.9e-24 Score=224.25 Aligned_cols=199 Identities=25% Similarity=0.391 Sum_probs=152.6
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.+.||.|++|.||+|+.. +++.||+|.+.... ......+.+|+.++++++|+||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 46888899999999999999964 68899999987543 34456789999999999999999999999999999999999
Q ss_pred cCCCChhhhh-------------------------------------------------ccccceeEecCCCccccccee
Q 004345 573 MPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 573 ~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
+++++|.+++ +|||+++.+.... ......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~~~~~~ 158 (274)
T cd06609 81 CGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--SKRNTF 158 (274)
T ss_pred eCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc--cccccc
Confidence 9999988763 3899888764332 122235
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
.++..|+|||.+....++.++||||||+++|||++|+.|+...... ... ........ +.+.... .
T Consensus 159 ~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~---~~~----~~~~~~~~-----~~~~~~~---~ 223 (274)
T cd06609 159 VGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM---RVL----FLIPKNNP-----PSLEGNK---F 223 (274)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH---HHH----HHhhhcCC-----CCCcccc---c
Confidence 6788999999999888999999999999999999999998533211 110 01111111 1111110 2
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.+++.+||+.+|++|||++++++
T Consensus 224 ~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 224 SKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 245678889999999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.8e-24 Score=224.37 Aligned_cols=205 Identities=23% Similarity=0.350 Sum_probs=151.1
Q ss_pred HHHhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++.+++.+.....||+|+||.||+|+.. ++..||+|.+........+.+.+|+.++++++|+||+++++++..++..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 3445666666689999999999999954 577899999876655566789999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh------------------------------------------------------ccccceeEecCC
Q 004345 569 IYEYMPNKSLDSFL------------------------------------------------------FDFGLARIFGGN 594 (760)
Q Consensus 569 V~Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~ 594 (760)
|+||+++++|..+| +|||++......
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 162 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI 162 (268)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence 99999999997653 267766654321
Q ss_pred CcccccceeeeeccccCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 595 QDQAATKRLVGTYGYMSPEYAMEGR--FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
.. ......++..|+|||++.... ++.++||||||+++|||++|+.|+....... ...+...... ..
T Consensus 163 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~---~~~~~~~~~~-------~~ 230 (268)
T cd06624 163 NP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ---AAMFKVGMFK-------IH 230 (268)
T ss_pred CC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh---hhHhhhhhhc-------cC
Confidence 11 112235788999999987644 7899999999999999999999985322110 0000000000 00
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+. .+......+.+++.+||+.+|++|||+.|+++
T Consensus 231 ~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 231 PE----IPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CC----CCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 11 11122345778889999999999999999976
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-24 Score=222.94 Aligned_cols=202 Identities=25% Similarity=0.355 Sum_probs=150.8
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccC-----ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS-----GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++|++.+.||+|++|.||++.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5688899999999999999985 468899999886432 1234578899999999999999999999999999999
Q ss_pred EEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCccc
Q 004345 569 IYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 569 V~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
|+||+++++|.+++ +|||+++.........
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~ 161 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG 161 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence 99999999987652 3888887653221111
Q ss_pred -ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 599 -ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 599 -~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......++..|+|||.+.+..++.++||||||+++|||++|+.|+...... ............ .
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~---------~ 226 (263)
T cd06625 162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM------AAIFKIATQPTN---------P 226 (263)
T ss_pred ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH------HHHHHHhccCCC---------C
Confidence 112345788999999999988999999999999999999999998532111 001111111000 0
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+......+.+++.+||+.+|++|||+.++++.
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 227 QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1111223456788899999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-24 Score=225.66 Aligned_cols=201 Identities=23% Similarity=0.413 Sum_probs=149.0
Q ss_pred HhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEeC------
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVER------ 563 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~------ 563 (760)
.+++.|++.+.||+|+||.||+|... +++.||+|++... .....++.+|+.++.++ +|+||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 46678899999999999999999864 5788999998654 34456789999999998 799999999998763
Q ss_pred CeeEEEEeccCCCChhhhh----------------------------------------------------ccccceeEe
Q 004345 564 EENMLIYEYMPNKSLDSFL----------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~ 591 (760)
...++||||+++++|.+++ +|||+++..
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 4579999999999987752 399998865
Q ss_pred cCCCcccccceeeeeccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCC
Q 004345 592 GGNQDQAATKRLVGTYGYMSPEYAM-----EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666 (760)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 666 (760)
.... .......|+..|+|||++. ...++.++|||||||++|||++|+.|+........ . ..... ..
T Consensus 162 ~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~-----~-~~~~~-~~ 232 (272)
T cd06637 162 DRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-----L-FLIPR-NP 232 (272)
T ss_pred cccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH-----H-HHHhc-CC
Confidence 3221 1223457889999999986 34588899999999999999999999853221110 0 00110 00
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 667 VIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 667 ~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..... . ......+.+++.+||+.+|.+|||+.+|++
T Consensus 233 ~~~~~-----~---~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 233 APRLK-----S---KKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCCC-----C---CCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00111 1 111245778899999999999999999975
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-24 Score=223.55 Aligned_cols=202 Identities=30% Similarity=0.449 Sum_probs=153.4
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.++|++.++||+|+||.||++....+..+|+|.+... ....+.|.+|+.++++++|+||+++++++.+ ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 4678899999999999999999877888999988643 2345679999999999999999999999887 7789999999
Q ss_pred CCCChhhhh----------------------------------------------------ccccceeEecCCCcccccc
Q 004345 574 PNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 574 ~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++++|.+++ .|||+++.+...... ...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~~ 161 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-ARE 161 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc-ccc
Confidence 999997763 388888765432211 122
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...++..|+|||.+....++.++|||||||+++|+++ |+.|+...... .+.. ....+.... ..
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~----~~~~~~~~~---------~~ 225 (260)
T cd05073 162 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIR----ALERGYRMP---------RP 225 (260)
T ss_pred CCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH---HHHH----HHhCCCCCC---------Cc
Confidence 2345678999999998889999999999999999999 88887532211 1111 111111111 11
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
......+.+++.+|++.+|++||++.++.++|+.
T Consensus 226 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 226 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1223457788999999999999999999999964
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.7e-24 Score=222.03 Aligned_cols=201 Identities=31% Similarity=0.443 Sum_probs=151.2
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
++|++.+.||+|++|.||++..+.+..+|+|.+.... ...+.|.+|+.++++++|+||+++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 5688889999999999999998777789999886432 34567999999999999999999999875 456899999999
Q ss_pred CCChhhhh----------------------------------------------------ccccceeEecCCCcccccce
Q 004345 575 NKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 575 ~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
+++|.+++ .|||+++........ ....
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-~~~~ 162 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT-ARQG 162 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc-ccCC
Confidence 99987653 389988765432211 1122
Q ss_pred eeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 603 LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
..++..|+|||......++.++||||||+++|||++ |+.|+...... ...... ..+.. . ..+.
T Consensus 163 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~----~~~~~-----~----~~~~ 226 (260)
T cd05069 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR---EVLEQV----ERGYR-----M----PCPQ 226 (260)
T ss_pred CccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HcCCC-----C----CCCc
Confidence 345678999999998899999999999999999999 88887532211 111111 11100 0 0111
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
.....+.+++.+||+.||++||++.+|++.|++
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 227 GCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 223567788899999999999999999999964
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-24 Score=209.32 Aligned_cols=195 Identities=26% Similarity=0.355 Sum_probs=155.6
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|-||.||.|+.+ ++-.||+|++.+.. .+-..++.+|++|-+.|+||||+++++++.+....||++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 46788899999999999999954 67789999997542 344568999999999999999999999999999999999
Q ss_pred eccCCCChhhhh----------------------------------------------------ccccceeEecCCCccc
Q 004345 571 EYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 571 Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||.++|+|...| +|||.+-.-. ..
T Consensus 102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p----~~ 177 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SN 177 (281)
T ss_pred EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC----CC
Confidence 999999987763 4999986532 33
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
.....+||.-|++||...+..++.++|+|++||+.||++.|.+||...... ..++.... .++.+|
T Consensus 178 kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~-------etYkrI~k---~~~~~p----- 242 (281)
T KOG0580|consen 178 KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS-------ETYKRIRK---VDLKFP----- 242 (281)
T ss_pred CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH-------HHHHHHHH---ccccCC-----
Confidence 445689999999999999999999999999999999999999999643211 11111111 111111
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..-...+.+++..|+..+|.+|.+..||+.
T Consensus 243 --~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 243 --STISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred --cccChhHHHHHHHHhccCccccccHHHHhh
Confidence 122345778899999999999999999976
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.9e-24 Score=224.28 Aligned_cols=199 Identities=22% Similarity=0.304 Sum_probs=149.4
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
+|++.++||+|+||.||++... +++.||||++.... ......+.+|+.++++++||||+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999954 68899999986432 2234567899999999999999999999999999999999
Q ss_pred ccCCCChhhhh----------------------------------------------------ccccceeEecCCCcccc
Q 004345 572 YMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 572 y~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|+++|+|..++ +|||+++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--- 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET--- 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc---
Confidence 99999997552 38998876532221
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....|+..|+|||++....++.++|||||||++|||++|+.||........ ............ ...
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~----------~~~ 224 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK---REEVERRVKEDQ----------EEY 224 (285)
T ss_pred cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH---HHHHHHHhhhcc----------ccc
Confidence 1234689999999999988999999999999999999999999864322111 011111110000 011
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
+......+.+++.+||+.||++|| ++.++++
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 225 SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 112234567889999999999999 7778855
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-24 Score=215.47 Aligned_cols=148 Identities=30% Similarity=0.464 Sum_probs=130.5
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|+..+.||.|+||.|.+.+.+ ++..+|+|++++.. -...+...+|..+|+.+.||++++|++.+.+....+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 45778899999999999999964 67889999998653 234556889999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++|.|..+| .|||+|+.... .+
T Consensus 124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~-----rT 198 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG-----RT 198 (355)
T ss_pred eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC-----cE
Confidence 999999998874 39999998742 25
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCc
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYH 647 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~ 647 (760)
-..+||+.|+|||.++...|+.++|.|||||++|||+.|.+||....
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~ 245 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN 245 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC
Confidence 56899999999999999999999999999999999999999997443
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-25 Score=216.60 Aligned_cols=201 Identities=23% Similarity=0.302 Sum_probs=154.7
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++.|++.++||+|.|+.||++.. ++|+.+|+|+++.. +..+.+++.+|+.|.+.|+|||||+|.+...+....+||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 35678889999999999999974 57899999988632 4456788999999999999999999999999999999999
Q ss_pred eccCCCChhhh-----------------------------------------------------hccccceeEecCCCcc
Q 004345 571 EYMPNKSLDSF-----------------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 571 Ey~~~gsL~~~-----------------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
|+|.|++|..- |+|||+|..+.. .
T Consensus 90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~---g 166 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND---G 166 (355)
T ss_pred ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC---c
Confidence 99999998542 259999998862 2
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
..-...+||++|||||++...+|+..+|||+.||+||-|+.|..||..... ..+.. ....+.. ++-.+..
T Consensus 167 ~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~---~rlye----~I~~g~y-d~~~~~w-- 236 (355)
T KOG0033|consen 167 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---HRLYE----QIKAGAY-DYPSPEW-- 236 (355)
T ss_pred cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH---HHHHH----HHhcccc-CCCCccc--
Confidence 333457899999999999999999999999999999999999999963221 11111 1111111 1111111
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..-.+...+++.+++..||.+|.|+.|.++
T Consensus 237 ---~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 237 ---DTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred ---CcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 111244567788899999999999988765
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-24 Score=231.84 Aligned_cols=191 Identities=23% Similarity=0.307 Sum_probs=144.9
Q ss_pred cccccCCceeEEEEEe----cCCcEEEEEEeccc----CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 501 NKLGQGGFGPVYKGKL----QDGQEIAVKRLSKA----SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~----~~~~~vavK~l~~~----~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+.||+|+||.||+++. ..++.||||+++.. .......+.+|+.++++++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6899999999999985 35789999998753 123345678999999999999999999999999999999999
Q ss_pred cCCCChhhhh--------------------------------------------------ccccceeEecCCCcccccce
Q 004345 573 MPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 573 ~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
+++++|.+++ +|||+++...... .....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~ 159 (323)
T cd05584 82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG--TVTHT 159 (323)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--Ccccc
Confidence 9999997652 4999987543222 12234
Q ss_pred eeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHH
Q 004345 603 LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 682 (760)
..||+.|+|||++....++.++|||||||++|||++|+.||...... ....... .+.. .+ +..
T Consensus 160 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~------~~~~~~~-~~~~------~~----~~~ 222 (323)
T cd05584 160 FCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK------KTIDKIL-KGKL------NL----PPY 222 (323)
T ss_pred cCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH------HHHHHHH-cCCC------CC----CCC
Confidence 57899999999999888999999999999999999999998643221 1111111 1110 01 111
Q ss_pred HHHHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 683 EIIRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 683 ~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
....+.+++.+||+.+|++|| ++.++++
T Consensus 223 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 223 LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 124567888999999999999 7888766
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-24 Score=221.68 Aligned_cols=199 Identities=21% Similarity=0.399 Sum_probs=151.5
Q ss_pred ccccccccccccCCceeEEEEEecC-CcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.++|++.++||+|+||.||+|.... ++.+++|.+..... .+++.+|++++++++|+||+++++++..+...++++||
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 3678889999999999999999764 78999999865432 67899999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+++++|.++| .|||++........ ...
T Consensus 80 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~ 157 (256)
T cd06612 80 CGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--KRN 157 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--ccc
Confidence 9999987763 37888776532221 122
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
...++..|+|||.+.+..++.++||||||+++|||++|+.|+......... . ..... ..+.+. .+.
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~------~-~~~~~-----~~~~~~--~~~ 223 (256)
T cd06612 158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI------F-MIPNK-----PPPTLS--DPE 223 (256)
T ss_pred cccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh------h-hhccC-----CCCCCC--chh
Confidence 345788999999999889999999999999999999999998643221100 0 00000 000000 111
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.....+.+++.+||+.||++|||+.||++
T Consensus 224 ~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 12245778889999999999999999986
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-25 Score=214.43 Aligned_cols=211 Identities=22% Similarity=0.262 Sum_probs=161.3
Q ss_pred HhccccccccccccCCceeEEEEE-ecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCC-----e
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE-----E 565 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~-----~ 565 (760)
...++|++.+.||+|||+.||+++ +.+++.+|+|++.-...++.+..++|++..++++|||++++++++..+. +
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 345789999999999999999999 6788999999998777788899999999999999999999999886544 4
Q ss_pred eEEEEeccCCCChhhhh--------------------------------------------------------cccccee
Q 004345 566 NMLIYEYMPNKSLDSFL--------------------------------------------------------FDFGLAR 589 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L--------------------------------------------------------~DFGla~ 589 (760)
.||++.|...|+|.+.| .|||.+.
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 89999999999998763 2788765
Q ss_pred EecC---CCcc----cccceeeeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHH
Q 004345 590 IFGG---NQDQ----AATKRLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAW 659 (760)
Q Consensus 590 ~~~~---~~~~----~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~ 659 (760)
...- +... ..-.....|..|.|||.+. ...+++++|||||||+||+|+.|..||+.....
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~---------- 247 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ---------- 247 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc----------
Confidence 4311 1000 0111234688999999986 345889999999999999999999999743221
Q ss_pred HhccCCC-ccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 660 KLWNDNN-VIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 660 ~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.+. ...+..+.+.-.......+.+.+++.+|++.||.+||++.+++..++.++
T Consensus 248 ----GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 248 ----GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ----CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 111 12223333322222335567888999999999999999999999987653
|
|
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-24 Score=229.99 Aligned_cols=204 Identities=26% Similarity=0.357 Sum_probs=149.1
Q ss_pred cccccccccccCCceeEEEEEecC-C--cEEEEEEeccc-CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQD-G--QEIAVKRLSKA-SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~-~--~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV 569 (760)
++|++.+.||+|+||.||+|...+ + ..+++|.++.. .....+.|.+|+.++.++ +||||+++++++......++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468888999999999999998653 3 34788888743 233456799999999999 799999999999999999999
Q ss_pred EeccCCCChhhhh------------------------------------------------------------------c
Q 004345 570 YEYMPNKSLDSFL------------------------------------------------------------------F 583 (760)
Q Consensus 570 ~Ey~~~gsL~~~L------------------------------------------------------------------~ 583 (760)
+||+++++|.++| .
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~ 161 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIA 161 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEEC
Confidence 9999999986432 3
Q ss_pred cccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhc
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLW 662 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 662 (760)
|||++..... .........+..|+|||.+....++.++|||||||++|||++ |..||...... ..... .
T Consensus 162 dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~------~~~~~-~ 231 (297)
T cd05089 162 DFGLSRGEEV---YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA------ELYEK-L 231 (297)
T ss_pred CcCCCccccc---eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHH-H
Confidence 7887653211 001111223557999999998889999999999999999998 99998532211 11111 1
Q ss_pred cCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 663 NDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 663 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
..+. ....+......+.+++.+||+.+|.+||++.+|+++|++...
T Consensus 232 ~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 232 PQGY---------RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred hcCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1110 000111122457789999999999999999999999987753
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-24 Score=231.39 Aligned_cols=209 Identities=26% Similarity=0.409 Sum_probs=152.8
Q ss_pred hccccccccccccCCceeEEEEEec--------CCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEe
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ--------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~ 562 (760)
..++|.+.++||+|+||.||+++.. ....+|+|.++... .....++.+|+.+++++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3457888999999999999999742 24579999987532 33456789999999999 69999999999999
Q ss_pred CCeeEEEEeccCCCChhhhh------------------------------------------------------------
Q 004345 563 REENMLIYEYMPNKSLDSFL------------------------------------------------------------ 582 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~L------------------------------------------------------------ 582 (760)
.+..++||||+++|+|.++|
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE 169 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence 99999999999999886542
Q ss_pred ------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHH
Q 004345 583 ------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLL 655 (760)
Q Consensus 583 ------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~ 655 (760)
+|||+++...............++..|||||.+....++.++|||||||++|||++ |..|+...... ...
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~---~~~ 246 (314)
T cd05099 170 DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE---ELF 246 (314)
T ss_pred CCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH---HHH
Confidence 38888876532221111112234567999999998899999999999999999999 88887532211 111
Q ss_pred HHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 656 GYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 656 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
.....+...+. .......+.+++.+||+.+|++|||+.++++.|++...
T Consensus 247 ----~~~~~~~~~~~---------~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 247 ----KLLREGHRMDK---------PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred ----HHHHcCCCCCC---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 11111111111 11122456688999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-24 Score=224.92 Aligned_cols=198 Identities=31% Similarity=0.500 Sum_probs=144.7
Q ss_pred cccccCCceeEEEEEecC-------CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 501 NKLGQGGFGPVYKGKLQD-------GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+.||+|+||.||+|+..+ ++.+|||.+.... ......|.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999886543 24466899999999999999999999999999999999999
Q ss_pred cCCCChhhhh--------------------------------------------------------------ccccceeE
Q 004345 573 MPNKSLDSFL--------------------------------------------------------------FDFGLARI 590 (760)
Q Consensus 573 ~~~gsL~~~L--------------------------------------------------------------~DFGla~~ 590 (760)
+++++|.++| +|||+++.
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 9999987653 25665554
Q ss_pred ecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccc
Q 004345 591 FGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVID 669 (760)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (760)
..............++..|+|||.+....++.++|||||||++|||++ |+.|+...... ...... ..+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~---~~~~~~----~~~~~~- 232 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ---EVLQHV----TAGGRL- 232 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH---HHHHHH----hcCCcc-
Confidence 322211111122345678999999999999999999999999999998 99888532211 111111 111100
Q ss_pred cccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 670 LVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 670 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
.........+.+++.+||+.+|.+||++++|+++|++
T Consensus 233 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 233 --------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred --------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0111123567789999999999999999999999863
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-25 Score=234.73 Aligned_cols=202 Identities=25% Similarity=0.381 Sum_probs=155.6
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecc--cCccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSK--ASGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~--~~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~E 571 (760)
..|+++++||+||.+.||++...+.+.+|+|++.. .+.+....|.+|+.+|.+|+ |.+||+|++|-..++.+|+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 45889999999999999999988888899998753 35566788999999999995 9999999999999999999999
Q ss_pred ccCCCChhhh--------------------------------------------------hccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
|-+ -+|..+ |+|||+|+.+..+.......
T Consensus 441 ~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kd 519 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKD 519 (677)
T ss_pred ccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCccccceeec
Confidence 853 344333 25999999887666555566
Q ss_pred eeeeeccccCccccccC-----------CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccc
Q 004345 602 RLVGTYGYMSPEYAMEG-----------RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDL 670 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-----------~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (760)
..+||+.||+||.+... +.+.++||||+||+||+|+-|+.||.... +.. .++..+
T Consensus 520 sQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-----n~~---------aKl~aI 585 (677)
T KOG0596|consen 520 SQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-----NQI---------AKLHAI 585 (677)
T ss_pred cccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-----HHH---------HHHHhh
Confidence 78999999999998532 26789999999999999999999985221 111 123334
Q ss_pred ccccccCCCCHH-HHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 671 VDPLISESGFKM-EIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 671 ~d~~l~~~~~~~-~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.||.-.-+++.. +-..++++|..||+.||++||++.++++.
T Consensus 586 ~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 586 TDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred cCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 444221111110 11238899999999999999999999873
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.6e-24 Score=222.56 Aligned_cols=200 Identities=25% Similarity=0.412 Sum_probs=148.9
Q ss_pred ccccccccccCCceeEEEEEecC--CcEEEEEEecccC----------ccchHhHHHHHHHHhc-CCCCccceeeeEEEe
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQD--GQEIAVKRLSKAS----------GQGQEEFMNEVMVISN-LQHRNLVRLLGCCVE 562 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~l~~~~----------~~~~~~f~~E~~~l~~-l~H~nIv~l~g~~~~ 562 (760)
+|++.+.||+|+||.||+|.... ++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999999754 6889999885321 1233467889998865 799999999999999
Q ss_pred CCeeEEEEeccCCCChhhhh-------------------------------------------------------ccccc
Q 004345 563 REENMLIYEYMPNKSLDSFL-------------------------------------------------------FDFGL 587 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~L-------------------------------------------------------~DFGl 587 (760)
++..++||||+++++|.+++ .|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 99999999999999886542 38888
Q ss_pred eeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCc
Q 004345 588 ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 588 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (760)
+....... ......++..|+|||.+....++.++||||||+++|||++|+.|+...... ...... .+...
T Consensus 161 ~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~------~~~~~~-~~~~~ 230 (269)
T cd08528 161 AKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML------SLATKI-VEAVY 230 (269)
T ss_pred eeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH------HHHHHH-hhccC
Confidence 87654322 223356888999999999888999999999999999999999997532111 111111 11111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
. +. .. ......+.+++.+||+.||++||++.||..+|+
T Consensus 231 ~----~~-~~---~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 231 E----PL-PE---GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred C----cC-Cc---ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 0 10 00 011245778888999999999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.2e-24 Score=248.04 Aligned_cols=209 Identities=18% Similarity=0.338 Sum_probs=154.5
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.++||+|+||.||+|... +++.||||++.... ....++|.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999964 58899999997532 223467999999999999999999999999999999999
Q ss_pred eccCCCChhhhh-------------------------------------------------------------cccccee
Q 004345 571 EYMPNKSLDSFL-------------------------------------------------------------FDFGLAR 589 (760)
Q Consensus 571 Ey~~~gsL~~~L-------------------------------------------------------------~DFGla~ 589 (760)
||+++|+|.++| +|||+++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 999999986531 3999998
Q ss_pred EecCCCc----------------ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCccccccc
Q 004345 590 IFGGNQD----------------QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELT 653 (760)
Q Consensus 590 ~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~ 653 (760)
....... .......+||+.|||||.+.+..++.++|||||||++|||+||+.||.......
T Consensus 162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k--- 238 (932)
T PRK13184 162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK--- 238 (932)
T ss_pred ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh---
Confidence 7621110 011123569999999999999999999999999999999999999986321110
Q ss_pred HHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCC-CHHHHHHHHhcccc
Q 004345 654 LLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRP-NMPTVVSMLNSEIK 717 (760)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-t~~ev~~~L~~~~~ 717 (760)
.. .. .. +.++.-. .........+.+++.+|++.||++|| +++++.+.|+..+.
T Consensus 239 i~---~~----~~---i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 IS---YR----DV---ILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hh---hh----hh---ccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 00 00 00 0000000 00011124567888999999999995 67778888876543
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-24 Score=235.98 Aligned_cols=203 Identities=22% Similarity=0.313 Sum_probs=145.9
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.|++++.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++.+++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578889999999999999985 467899999997532 2345678999999999999999999999999999999999
Q ss_pred ccCCCChhhhh--------------------------------------------------ccccceeEecCCCc-----
Q 004345 572 YMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD----- 596 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~----- 596 (760)
|+++|+|.++| +|||+++.+.....
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~ 161 (381)
T cd05626 82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ 161 (381)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence 99999997653 39999764311000
Q ss_pred ----------------------------------------ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHH
Q 004345 597 ----------------------------------------QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEI 636 (760)
Q Consensus 597 ----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~El 636 (760)
.......+||+.|||||.+....++.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el 241 (381)
T cd05626 162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM 241 (381)
T ss_pred ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence 0001235799999999999988999999999999999999
Q ss_pred HhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHh--cccCCcCCCCCHHHHHHH
Q 004345 637 VSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLL--CVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 637 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~--Cl~~~P~~RPt~~ev~~~ 711 (760)
++|+.||......... ............ .+. ... . ..+.+++.+ |+..+|..||++.++++.
T Consensus 242 ltG~~Pf~~~~~~~~~------~~i~~~~~~~~~-~~~--~~~-s---~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 242 LVGQPPFLAPTPTETQ------LKVINWENTLHI-PPQ--VKL-S---PEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HhCCCCCcCCCHHHHH------HHHHccccccCC-CCC--CCC-C---HHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 9999998643221110 001000000000 000 011 1 233344433 777788889999999874
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.7e-24 Score=221.82 Aligned_cols=202 Identities=21% Similarity=0.395 Sum_probs=150.2
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
++|++.++||+|+||.||+|+. .+++.||+|.++.........+.+|+.+++.++||||+++++.+...+..++|+||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 5688889999999999999985 468899999987654455567889999999999999999999999999999999999
Q ss_pred CCCChhhhh--------------------------------------------------ccccceeEecCCCccccccee
Q 004345 574 PNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 574 ~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
++++|.+++ +|||++..+.... ......
T Consensus 89 ~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~ 166 (267)
T cd06645 89 GGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI--AKRKSF 166 (267)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc--cccccc
Confidence 999998652 3899887653221 122345
Q ss_pred eeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 604 VGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 604 ~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
.|+..|+|||.+. ...++.++|||||||++|||++|+.|+........ . ... ..... ..+......
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~--~----~~~-~~~~~---~~~~~~~~~- 235 (267)
T cd06645 167 IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--L----FLM-TKSNF---QPPKLKDKM- 235 (267)
T ss_pred cCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh--H----Hhh-hccCC---CCCcccccC-
Confidence 7899999999974 45688999999999999999999999753221110 0 000 00000 001111000
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.....+.+++.+|++.+|++||++++|++
T Consensus 236 -~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 236 -KWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred -CCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 01234678899999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-24 Score=230.84 Aligned_cols=195 Identities=23% Similarity=0.340 Sum_probs=143.7
Q ss_pred cccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHH---hcCCCCccceeeeEEEeCCeeEEE
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVI---SNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l---~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
|++.+.||+|+||.||+|... +++.||||++++.. ....+.+.+|++++ ++++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567899999999999999854 68899999997532 23345677776655 567899999999999999999999
Q ss_pred EeccCCCChhhhh-------------------------------------------------ccccceeEecCCCccccc
Q 004345 570 YEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 570 ~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|||+++++|..++ +|||+++...... ...
T Consensus 81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~ 158 (324)
T cd05589 81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG--DRT 158 (324)
T ss_pred EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC--Ccc
Confidence 9999999986542 4999887532211 122
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....|++.|||||.+.+..++.++|||||||++|||++|+.||....... .. .... .+.. ....
T Consensus 159 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~---~~---~~i~-~~~~------~~p~--- 222 (324)
T cd05589 159 STFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE---VF---DSIV-NDEV------RYPR--- 222 (324)
T ss_pred cccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH---HH---HHHH-hCCC------CCCC---
Confidence 34678999999999999999999999999999999999999986332211 11 1110 1100 0111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
.....+.+++.+||+.||.+|| ++.++++
T Consensus 223 -~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 223 -FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 1124567888999999999999 4666655
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-24 Score=221.77 Aligned_cols=197 Identities=26% Similarity=0.389 Sum_probs=144.6
Q ss_pred ccccCCceeEEEEEec---CCcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCC
Q 004345 502 KLGQGGFGPVYKGKLQ---DGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKS 577 (760)
Q Consensus 502 ~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 577 (760)
.||+|+||.||+|.+. .+..||+|++..... ...++|.+|+.++++++||||+++++++. .+..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999854 355799999875432 33467999999999999999999999885 457899999999999
Q ss_pred hhhhh---------------------------------------------------ccccceeEecCCCccc-ccceeee
Q 004345 578 LDSFL---------------------------------------------------FDFGLARIFGGNQDQA-ATKRLVG 605 (760)
Q Consensus 578 L~~~L---------------------------------------------------~DFGla~~~~~~~~~~-~~~~~~g 605 (760)
|.+++ +|||+++.+....... ......+
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 160 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKW 160 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCC
Confidence 98763 3899887553322111 1111233
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 684 (760)
+..|+|||.+....++.++|||||||++||+++ |..|+...... ... .....+.. ...+....
T Consensus 161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~----~~~~~~~~---------~~~~~~~~ 224 (257)
T cd05115 161 PLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP---EVM----SFIEQGKR---------LDCPAECP 224 (257)
T ss_pred CcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH---HHH----HHHHCCCC---------CCCCCCCC
Confidence 578999999988889999999999999999996 99998533221 111 11111111 01111223
Q ss_pred HHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 685 IRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 685 ~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
..+.+++.+||+.+|++||++.+|.+.|+..
T Consensus 225 ~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 225 PEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 5677889999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-24 Score=237.31 Aligned_cols=203 Identities=23% Similarity=0.294 Sum_probs=152.7
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+|+.. +++.||||+++... ......+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46889999999999999999965 68999999997532 244567899999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCC-----
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQ----- 595 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~----- 595 (760)
||+++++|.++| +|||+++.+....
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY 160 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence 999999997763 3999988654322
Q ss_pred ----------------------cccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCccccccc
Q 004345 596 ----------------------DQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELT 653 (760)
Q Consensus 596 ----------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~ 653 (760)
.........||+.|+|||.+....++.++|||||||++|||++|+.||......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~---- 236 (350)
T cd05573 161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ---- 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH----
Confidence 001223457899999999999999999999999999999999999998643211
Q ss_pred HHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCC-HHHHHHH
Q 004345 654 LLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPN-MPTVVSM 711 (760)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt-~~ev~~~ 711 (760)
.............. -+. .......+.+++.+|++ ||.+||+ +.++++.
T Consensus 237 --~~~~~i~~~~~~~~--~p~-----~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 237 --ETYNKIINWKESLR--FPP-----DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred --HHHHHHhccCCccc--CCC-----CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 11111111000000 000 00012456677888997 9999999 9999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-24 Score=224.74 Aligned_cols=206 Identities=25% Similarity=0.430 Sum_probs=153.3
Q ss_pred cccccccccccCCceeEEEEEec-CC----cEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DG----QEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~----~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
.+|++.+.||+|+||.||+|... ++ ..+|+|.+..... ....++.+|+.++++++||||++++++|.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 46788899999999999999864 23 3689998875533 345679999999999999999999999987 78899
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
|+||+++|+|.++| +|||+++.+......
T Consensus 86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~ 165 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKE 165 (279)
T ss_pred EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccc
Confidence 99999999988763 389988876433222
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......++..|+|||.+....++.++||||||+++||+++ |+.|+.....+ .+.. ....+...
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~----~~~~~~~~-------- 230 (279)
T cd05057 166 YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV---EIPD----LLEKGERL-------- 230 (279)
T ss_pred eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH---HHHH----HHhCCCCC--------
Confidence 21112234568999999988899999999999999999999 99998643221 1111 11111100
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
..+......+.+++.+||..+|.+||++.++++.|++..+
T Consensus 231 -~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 231 -PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0011122456788899999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-24 Score=230.16 Aligned_cols=198 Identities=19% Similarity=0.272 Sum_probs=145.7
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
++||+|+||.||+++.. +++.||||++++.. ....+.+.+|..++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999964 68899999997532 23345688999999988 799999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..++ +|||+++...... .......|
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~g 158 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--DTTSTFCG 158 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCC--CccccccC
Confidence 9997652 4999987432111 12234578
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccc--cccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEF--ELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
|+.|+|||++....++.++|||||||++|||++|+.||+...... ......+..+....... .+.. ..
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~~p~----~~ 228 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI------RIPR----SL 228 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC------CCCC----CC
Confidence 999999999999999999999999999999999999996432211 11111222222111111 1111 11
Q ss_pred HHHHHHHHHhcccCCcCCCCC------HHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPN------MPTVVS 710 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt------~~ev~~ 710 (760)
...+.+++.+|++.||.+||+ +.++++
T Consensus 229 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 229 SVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 245678889999999999998 567654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-24 Score=230.69 Aligned_cols=191 Identities=23% Similarity=0.268 Sum_probs=144.4
Q ss_pred cccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCC
Q 004345 501 NKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
+.||+|+||.||+++. .+++.||+|+++.. .......+.+|++++++++||||+++++++...+..+|||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999995 46899999999753 2234457889999999999999999999999999999999999999
Q ss_pred Chhhhh--------------------------------------------------ccccceeEecCCCcccccceeeee
Q 004345 577 SLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVGT 606 (760)
Q Consensus 577 sL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt 606 (760)
+|..++ +|||+++...... .......||
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~gt 158 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGT 158 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--CccccccCC
Confidence 997652 4999987532211 112235789
Q ss_pred ccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHH
Q 004345 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIR 686 (760)
Q Consensus 607 ~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 686 (760)
+.|||||++....++.++|||||||++|||++|+.||...... ... .... .... .+... ....
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~---~~~---~~~~-~~~~------~~p~~----~~~~ 221 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLF---ELIL-MEEI------RFPRT----LSPE 221 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH---HHH---HHHh-cCCC------CCCCC----CCHH
Confidence 9999999999999999999999999999999999998532211 111 1110 0000 01111 1245
Q ss_pred HHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 687 CVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 687 ~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
+.+++.+||+.||++|| ++.++++
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 222 AKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 66788899999999998 7888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.5e-24 Score=220.24 Aligned_cols=198 Identities=32% Similarity=0.460 Sum_probs=146.6
Q ss_pred cccccCCceeEEEEEecC----CcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQD----GQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
++||+|+||.||+|+... +..+|+|.+..... ...+++.+|+.++++++|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 479999999999998532 26899999875533 34567999999999999999999999876 4568999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCccc-ccceee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQA-ATKRLV 604 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~-~~~~~~ 604 (760)
++|.++| +|||+++.+....... ......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~ 159 (257)
T cd05060 80 GPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGR 159 (257)
T ss_pred CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCcc
Confidence 9998763 3899888664332211 111122
Q ss_pred eeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 605 gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
++..|+|||.+....++.++||||||+++|||++ |..||..... ..+..... ...... .+...
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---~~~~~~~~----~~~~~~---------~~~~~ 223 (257)
T cd05060 160 WPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---AEVIAMLE----SGERLP---------RPEEC 223 (257)
T ss_pred ccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHH----cCCcCC---------CCCCC
Confidence 4568999999998899999999999999999998 8999864322 11222111 111000 01112
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
...+.+++.+|++.+|++||++.+|++.|++.
T Consensus 224 ~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 224 PQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 24677899999999999999999999999775
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=228.16 Aligned_cols=203 Identities=22% Similarity=0.296 Sum_probs=161.6
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEecccCcc---chHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQ---GQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENM 567 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~ 567 (760)
....|++.+.||+|.||.||+++.+ +|+.+|+|.+.+.... ..+.+.+|+.+|+++. |||||.+.+.++.....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3457888899999999999999966 4999999999765432 3468999999999998 999999999999999999
Q ss_pred EEEeccCCCChhhhh-----------------------------------------------------ccccceeEecCC
Q 004345 568 LIYEYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGN 594 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~ 594 (760)
+|||++.+|.|.+.| +|||+++....
T Consensus 113 lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~- 191 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP- 191 (382)
T ss_pred EEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC-
Confidence 999999999998753 39999998754
Q ss_pred CcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 595 QDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
.......+||+.|+|||++....|+.++||||.||++|.|++|..||....+..... ....++. .
T Consensus 192 --~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------~i~~~~~------~ 256 (382)
T KOG0032|consen 192 --GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------AILRGDF------D 256 (382)
T ss_pred --CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------HHHcCCC------C
Confidence 334556899999999999999999999999999999999999999997543321111 1111111 1
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
............+.+++..++..||.+|+|+.++++.
T Consensus 257 f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 257 FTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 1111222234556678889999999999999999983
|
|
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.4e-24 Score=225.81 Aligned_cols=201 Identities=22% Similarity=0.375 Sum_probs=153.7
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
..+|++.+.||.|++|.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 35689999999999999999985 57899999999765555567899999999999999999999999999999999999
Q ss_pred cCCCChhhhh-------------------------------------------------ccccceeEecCCCccccccee
Q 004345 573 MPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 573 ~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
+++++|..++ +|||+++.+..... .....
T Consensus 98 ~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~ 175 (296)
T cd06655 98 LAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS--KRSTM 175 (296)
T ss_pred cCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc--cCCCc
Confidence 9999997652 38888776533221 12234
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
.++..|+|||.+....++.++|||||||++|||++|+.||......... ...... .... +. .+...
T Consensus 176 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~------~~~~~~-~~~~-----~~--~~~~~ 241 (296)
T cd06655 176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATN-GTPE-----LQ--NPEKL 241 (296)
T ss_pred CCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHhc-CCcc-----cC--CcccC
Confidence 6788999999999888999999999999999999999998643221110 000000 0000 00 01111
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.+++.+||+.||++||++.+|++
T Consensus 242 ~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 242 SPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred CHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 235667889999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-24 Score=231.93 Aligned_cols=201 Identities=22% Similarity=0.268 Sum_probs=149.6
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||++... +++.||+|+++... ....+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46889999999999999999854 68899999997542 234557889999999999999999999999999999999
Q ss_pred eccCCCChhhhh---------------------------------------------------ccccceeEecCCCcccc
Q 004345 571 EYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 571 Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
||+++|+|.++| +|||+++.+...... .
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~-~ 159 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV-N 159 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce-e
Confidence 999999998763 399999876433221 2
Q ss_pred cceeeeeccccCccccc------cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 600 TKRLVGTYGYMSPEYAM------EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~------~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||...... ................
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~------~~~~~i~~~~~~~~~~-- 231 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA------KTYNNIMNFQRFLKFP-- 231 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH------HHHHHHHcCCCccCCC--
Confidence 22346899999999986 456789999999999999999999998633221 1111111111111110
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. .......+.+++..|++ +|.+||++.++++
T Consensus 232 ---~--~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 232 ---E--DPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred ---C--CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0 00112446677778897 9999999999986
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.91 E-value=8e-24 Score=229.60 Aligned_cols=207 Identities=25% Similarity=0.369 Sum_probs=152.7
Q ss_pred cccccccccccCCceeEEEEEec--------CCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCC
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ--------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVERE 564 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~ 564 (760)
.+|.+.+.||+|+||.||++... ....||+|.++... ....+++.+|+.++.++ +||||++++++|..++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46888999999999999999742 12368999887432 33456899999999999 7999999999999999
Q ss_pred eeEEEEeccCCCChhhhh--------------------------------------------------------------
Q 004345 565 ENMLIYEYMPNKSLDSFL-------------------------------------------------------------- 582 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L-------------------------------------------------------------- 582 (760)
..++++||+++|+|.++|
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~ 171 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDN 171 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC
Confidence 999999999999886542
Q ss_pred ----ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHH
Q 004345 583 ----FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGY 657 (760)
Q Consensus 583 ----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~ 657 (760)
+|||+++...............++..|||||.+....++.++||||||+++|||++ |..|+.....+ ..
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~ 245 (334)
T cd05100 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE------EL 245 (334)
T ss_pred cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH------HH
Confidence 38888876543222111222334567999999999999999999999999999998 78887532211 11
Q ss_pred HHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 658 AWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 658 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
... ...+...+ .+......+.+++.+||+.+|++||+|.|+++.|+++..
T Consensus 246 ~~~-~~~~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 246 FKL-LKEGHRMD---------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHH-HHcCCCCC---------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 111 11111111 111123467789999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-23 Score=222.32 Aligned_cols=201 Identities=22% Similarity=0.375 Sum_probs=150.7
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.+.|++.++||+|+||.||+|+.. +++.+++|.+........+.+.+|+.++++++||||+++++++..+...++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 356888999999999999999965 5889999999766656677899999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+++++|..++ +|||++....... ....
T Consensus 91 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--~~~~ 168 (292)
T cd06644 91 CPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL--QRRD 168 (292)
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccc--cccc
Confidence 9999986542 3888876542221 1122
Q ss_pred eeeeeccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 602 RLVGTYGYMSPEYAM-----EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
...++..|+|||.+. ...++.++|||||||++|||++|+.|+...... ....... .... +.+.
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------~~~~~~~-~~~~-----~~~~ 236 (292)
T cd06644 169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKIA-KSEP-----PTLS 236 (292)
T ss_pred eecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH------HHHHHHh-cCCC-----ccCC
Confidence 356788999999985 345788999999999999999999998533211 1111111 1100 0000
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+......+.+++.+||+.+|++||++.+|++
T Consensus 237 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 237 --QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred --CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 01112245778899999999999999999976
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.7e-24 Score=220.44 Aligned_cols=203 Identities=22% Similarity=0.393 Sum_probs=153.9
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.++|++.+.||+|+||.||++... +++.+++|.+........+.+.+|+.++++++||||+++++++..++..+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 467899999999999999999964 5788999999766555678899999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+++++|.+++ +|||++..+.... ....
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~~~~ 159 (262)
T cd06613 82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--AKRK 159 (262)
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhh--hccc
Confidence 9999987652 3788776543211 1122
Q ss_pred eeeeeccccCccccccC---CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 602 RLVGTYGYMSPEYAMEG---RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~---~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
...++..|+|||.+... .++.++||||||+++|||++|+.|+........ .. .. .... ...+.+.
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~--~~----~~-~~~~---~~~~~~~-- 227 (262)
T cd06613 160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA--LF----LI-SKSN---FPPPKLK-- 227 (262)
T ss_pred cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HH----HH-Hhcc---CCCcccc--
Confidence 34678899999999776 889999999999999999999999864322111 00 00 0000 0001111
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
........+.+++.+||+.+|.+|||+.+|+.
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11223456789999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-24 Score=225.94 Aligned_cols=214 Identities=22% Similarity=0.370 Sum_probs=149.7
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|++.++||+|+||.||+|..+ +++.||+|++..... ...+.+.+|++++++++||||+++++++..++..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999975 588999999865322 235678899999999999999999999999999999999
Q ss_pred ccCCCChhhh--------------------------------------------------hccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
|+++++|..+ |+|||+++.+..... ...
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~ 158 (286)
T cd07846 81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYT 158 (286)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc--ccC
Confidence 9999887654 138998876543221 122
Q ss_pred eeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhc--------cCCCcc-ccc
Q 004345 602 RLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLW--------NDNNVI-DLV 671 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~ 671 (760)
...++..|+|||.+.. ..++.++||||||+++|||++|+.|+..........-.......+ ...... .+.
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 3467889999999875 457889999999999999999998885332111000000000000 000000 000
Q ss_pred cccccCCC-----CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 672 DPLISESG-----FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 672 d~~l~~~~-----~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+...... .......+.+++.+||+.+|++||++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000 0112356888999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-24 Score=227.92 Aligned_cols=205 Identities=26% Similarity=0.473 Sum_probs=150.3
Q ss_pred cccccccccccCCceeEEEEEec-CCc----EEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQ----EIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++|+..+.||+|+||.||+|... ++. .||+|.+..... ....++.+|+.++++++||||++++|+|... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 45677899999999999999853 343 578998865432 2344789999999999999999999998754 5679
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
++||+++|+|.+++ +|||+++.+......
T Consensus 86 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 165 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 165 (303)
T ss_pred eehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcccc
Confidence 99999999887652 399999876433322
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......++..|+|||.+....++.++|||||||++|||++ |+.|+...... ...... ..+....
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~---~~~~~~----~~~~~~~------- 231 (303)
T cd05110 166 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---EIPDLL----EKGERLP------- 231 (303)
T ss_pred cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HCCCCCC-------
Confidence 22223345778999999998999999999999999999998 88887532211 111111 1111000
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
........+.+++..||..+|++||++.+++++|+++.
T Consensus 232 --~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 232 --QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred --CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00112245778899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=232.04 Aligned_cols=209 Identities=14% Similarity=0.139 Sum_probs=146.3
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.++|++.++||+|+||.||++.. .+++.||+|... ...+.+|++++++++|||||++++++..+...++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 36799999999999999999995 468899999753 24578999999999999999999999999999999999
Q ss_pred cCCCChhhh--------------------------------------------------hccccceeEecCCCcccccce
Q 004345 573 MPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 573 ~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~~~ 602 (760)
+. ++|..+ |+|||+|+...... ......
T Consensus 165 ~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-~~~~~~ 242 (391)
T PHA03212 165 YK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-ANKYYG 242 (391)
T ss_pred CC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc-cccccc
Confidence 96 566543 24999987532211 112234
Q ss_pred eeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccc----cccHHHHHHHhccC----------CCcc
Q 004345 603 LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEF----ELTLLGYAWKLWND----------NNVI 668 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~----~~~~~~~~~~~~~~----------~~~~ 668 (760)
..||+.|+|||++....++.++|||||||++|||++|+.|+....... .............. ....
T Consensus 243 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~ 322 (391)
T PHA03212 243 WAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLD 322 (391)
T ss_pred ccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHH
Confidence 579999999999999999999999999999999999998864321110 00011111100000 0000
Q ss_pred ccc---------cccccCC--CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 669 DLV---------DPLISES--GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 669 ~~~---------d~~l~~~--~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+.. .+..... ........+.+++.+||+.||++|||+.|+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 323 EIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000 0000000 00012346778999999999999999999986
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.5e-24 Score=232.15 Aligned_cols=206 Identities=21% Similarity=0.268 Sum_probs=152.2
Q ss_pred HhccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
...++|++.+.||+|+||.||+++.. +++.||+|++.+. .....+.+.+|+.+++.++||||+++++++.++...+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34568999999999999999999964 6889999999643 2233456789999999999999999999999999999
Q ss_pred EEEeccCCCChhhhh-------------------------------------------------ccccceeEecCCCccc
Q 004345 568 LIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
+||||+++|+|..++ +|||+++....... .
T Consensus 120 lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~-~ 198 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM-V 198 (370)
T ss_pred EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc-c
Confidence 999999999998763 39999987643221 1
Q ss_pred ccceeeeeccccCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 599 ATKRLVGTYGYMSPEYAMEG----RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~----~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
......||+.|||||.+... .++.++|||||||++|||++|+.||...... ...............
T Consensus 199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~~~~~~~---- 268 (370)
T cd05596 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMDHKNSLTF---- 268 (370)
T ss_pred cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH------HHHHHHHcCCCcCCC----
Confidence 22345799999999998653 4789999999999999999999998643211 111111111100000
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCC--CCCHHHHHHH
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKD--RPNMPTVVSM 711 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPt~~ev~~~ 711 (760)
.. .......+.+++..|++.+|++ ||++.++++.
T Consensus 269 -~~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 269 -PD--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred -CC--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 00 0011245667888999999988 9999999763
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.1e-24 Score=220.48 Aligned_cols=198 Identities=20% Similarity=0.267 Sum_probs=150.8
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
+|++.++||+|+||.||++... +++.+|+|.++.. .....+.+.+|+.++++++|+||+++++.+..++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999854 6889999998643 2344567889999999999999999999999999999999999
Q ss_pred CCCChhhhh----------------------------------------------------ccccceeEecCCCcccccc
Q 004345 574 PNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 574 ~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++++|.+++ +|||+++....... ...
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--~~~ 158 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA--YAC 158 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc--ccc
Confidence 999886642 38888876543221 122
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
...++..|+|||++....++.++||||||+++|||++|+.||...... ...... ..+.... + +.
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~------~~~~~~-~~~~~~~-~--------~~ 222 (255)
T cd08219 159 TYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK------NLILKV-CQGSYKP-L--------PS 222 (255)
T ss_pred cccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH------HHHHHH-hcCCCCC-C--------Cc
Confidence 356888999999998888999999999999999999999998632211 111111 1111110 0 11
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.....+.+++.+||+.||++||++.+|+..
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 112356788899999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.1e-24 Score=232.00 Aligned_cols=202 Identities=20% Similarity=0.280 Sum_probs=147.5
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+++.. +++.||||++.... ......+.+|+.++..++||||+++++++.+++..+|||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46889999999999999999964 68899999997532 233456889999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccc--
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQA-- 598 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~-- 598 (760)
||+++|+|.++| +|||+++.+.......
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 160 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY 160 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence 999999998763 3999987653211000
Q ss_pred ----------------------------------ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 004345 599 ----------------------------------ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTS 644 (760)
Q Consensus 599 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~ 644 (760)
.....+||+.|||||++....++.++|||||||++|||++|..||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~ 240 (364)
T cd05599 161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC 240 (364)
T ss_pred ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence 0112469999999999999999999999999999999999999986
Q ss_pred CCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCC---HHHHHH
Q 004345 645 FYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPN---MPTVVS 710 (760)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt---~~ev~~ 710 (760)
...... . ............. .... .....+.+++.+|+. +|.+|++ +.|+++
T Consensus 241 ~~~~~~---~---~~~i~~~~~~~~~-----~~~~--~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 241 SDNPQE---T---YRKIINWKETLQF-----PDEV--PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCHHH---H---HHHHHcCCCccCC-----CCCC--CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 432211 1 1111100000000 0000 011345566667776 8999998 888876
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.8e-24 Score=230.72 Aligned_cols=192 Identities=21% Similarity=0.236 Sum_probs=145.7
Q ss_pred cccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCC
Q 004345 501 NKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
+.||+|+||.||++.. .+++.||||++.+. .......+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4689999999999985 46899999999753 2334567889999999999999999999999999999999999999
Q ss_pred Chhhhh--------------------------------------------------ccccceeEecCCCcccccceeeee
Q 004345 577 SLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVGT 606 (760)
Q Consensus 577 sL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt 606 (760)
+|..++ +|||+++...... .......||
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt 158 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATMKTFCGT 158 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--cccccccCC
Confidence 997652 3999987532211 122345799
Q ss_pred ccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHH
Q 004345 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIR 686 (760)
Q Consensus 607 ~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 686 (760)
+.|+|||.+....++.++|||||||++|||++|+.||...... ....... ... ..+.. .....
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~------~~~~~~~-~~~------~~~p~----~~~~~ 221 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLFELIL-MED------IKFPR----TLSAD 221 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH------HHHHHhc-cCC------ccCCC----CCCHH
Confidence 9999999999999999999999999999999999998532211 1111111 000 01111 11245
Q ss_pred HHHHHHhcccCCcCCCC-----CHHHHHHH
Q 004345 687 CVNVGLLCVQEFVKDRP-----NMPTVVSM 711 (760)
Q Consensus 687 ~~~l~~~Cl~~~P~~RP-----t~~ev~~~ 711 (760)
+.+++.+||+.||++|| ++.|+++.
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 222 AKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 67788899999999997 88888763
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=221.56 Aligned_cols=203 Identities=22% Similarity=0.353 Sum_probs=151.5
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
+.++|++.+.||+|+||.||++... +++.+|+|.+........+.|.+|++++++++||||+++++.+..+...++|||
T Consensus 3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 3567899999999999999999964 688999999876555566789999999999999999999999999999999999
Q ss_pred ccCCCChhhhh---------------------------------------------------ccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|+++++|..++ +|||++....... ...
T Consensus 83 ~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--~~~ 160 (280)
T cd06611 83 FCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL--QKR 160 (280)
T ss_pred ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccc--ccc
Confidence 99999997663 3788766542211 122
Q ss_pred ceeeeeccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 601 KRLVGTYGYMSPEYAM-----EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
....++..|+|||.+. ...++.++||||||+++|||++|+.|+...... ..... ...... +.+
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~------~~~~~-~~~~~~-----~~~ 228 (280)
T cd06611 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM------RVLLK-ILKSEP-----PTL 228 (280)
T ss_pred ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH------HHHHH-HhcCCC-----CCc
Confidence 3356889999999975 345788999999999999999999998533211 00111 111110 011
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.. +......+.+++..||+.+|.+||++.+|++.
T Consensus 229 ~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 229 DQ--PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CC--cccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 00 11112356788889999999999999999763
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.8e-24 Score=228.04 Aligned_cols=203 Identities=29% Similarity=0.409 Sum_probs=147.9
Q ss_pred cccccccccccCCceeEEEEEec-CCc--EEEEEEeccc-CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQ--EIAVKRLSKA-SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV 569 (760)
++|++.+.||+|+||.||+|... ++. .+|+|.++.. .....+.|.+|++++.++ +||||+++++++..++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 56788899999999999999864 343 4688877643 233456789999999999 899999999999999999999
Q ss_pred EeccCCCChhhhh------------------------------------------------------------------c
Q 004345 570 YEYMPNKSLDSFL------------------------------------------------------------------F 583 (760)
Q Consensus 570 ~Ey~~~gsL~~~L------------------------------------------------------------------~ 583 (760)
|||+++++|.++| +
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~ 166 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 166 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeC
Confidence 9999999876532 3
Q ss_pred cccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhc
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLW 662 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 662 (760)
|||+++.... ........++..|+|||.+....++.++|||||||++|||+| |..||...... ..... .
T Consensus 167 dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~----~ 236 (303)
T cd05088 167 DFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYEK----L 236 (303)
T ss_pred ccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH---HHHHH----H
Confidence 7887753211 011111234568999999988889999999999999999998 99888532211 11111 1
Q ss_pred cCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 663 NDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 663 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
..+... .........+.+++.+||+.+|++||++.+++++|++++
T Consensus 237 ~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 237 PQGYRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred hcCCcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111000 001111245678999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.8e-24 Score=225.72 Aligned_cols=211 Identities=24% Similarity=0.358 Sum_probs=151.9
Q ss_pred ccccccccccCCceeEEEEEe-----cCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeC--CeeE
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-----QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EENM 567 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~ 567 (760)
.|++.+.||+|+||.||+++. .+++.||+|.++... ....+.+.+|+.++++++||||+++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467889999999999999984 357889999987543 33456799999999999999999999999875 5679
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCc
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+||||+++++|.+++ .|||+++.+.....
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~ 164 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 164 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCcc
Confidence 999999999998763 38998876543222
Q ss_pred c-cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccc--------cccHHHHHHHhccCCCc
Q 004345 597 Q-AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEF--------ELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 597 ~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~ 667 (760)
. .......++..|+|||.+.+..++.++||||||+++|||++++.|........ ..............+..
T Consensus 165 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd05079 165 YYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKR 244 (284)
T ss_pred ceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCcc
Confidence 1 11223456778999999988889999999999999999999876642111000 00000000011111100
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
..........+.+++.+|++.+|++|||+.++++.|+++
T Consensus 245 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 245 ---------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ---------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 001111235788899999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.3e-24 Score=222.02 Aligned_cols=204 Identities=24% Similarity=0.383 Sum_probs=151.1
Q ss_pred cccccccccccCCceeEEEEEecC----CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQD----GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
++|.+.++||+|+||.||+|...+ ...||||...... ....+.|.+|+.++++++||||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457788999999999999998643 3469999887544 3455689999999999999999999999875 567899
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
|||+++|+|.++| .|||+++.........
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 164 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK 164 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccccccee
Confidence 9999999998763 3888887654332111
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
.....++..|+|||.+....++.++||||||++++|+++ |..||...... ...... ..+... ....
T Consensus 165 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~~~~----~~~~~~-----~~~~ 231 (270)
T cd05056 165 -ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN---DVIGRI----ENGERL-----PMPP 231 (270)
T ss_pred -cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHH----HcCCcC-----CCCC
Confidence 112234568999999988889999999999999999996 99998533221 111111 111100 0111
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.....+.+++.+|+..+|++|||+.++++.|++..
T Consensus 232 ----~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 232 ----NCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred ----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 12246778889999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=227.52 Aligned_cols=201 Identities=24% Similarity=0.340 Sum_probs=148.0
Q ss_pred ccccccccccCCceeEEEEEe----cCCcEEEEEEecccC----ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCee
Q 004345 496 NFQLANKLGQGGFGPVYKGKL----QDGQEIAVKRLSKAS----GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~ 566 (760)
+|++.+.||+|+||.||+++. .+++.||+|++.+.. ....+.+.+|+.++.++ +|+||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999874 357899999986431 23345688999999999 599999999999999999
Q ss_pred EEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCc
Q 004345 567 MLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~ 596 (760)
++||||+++|+|.+++ +|||+++.+.....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~ 160 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK 160 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence 9999999999997653 39999886533222
Q ss_pred ccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
. ......||+.|||||.+.+. .++.++|||||||++|||++|+.||.......... ........ .++.+
T Consensus 161 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~--~~~~~~~~-------~~~~~ 230 (332)
T cd05614 161 E-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQS--EVSRRILK-------CDPPF 230 (332)
T ss_pred C-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHH--HHHHHHhc-------CCCCC
Confidence 1 22345799999999999865 47899999999999999999999986432221111 11111110 01111
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
.. .....+.+++.+||+.||++|| ++.++++
T Consensus 231 ~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 231 PS----FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CC----CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 11 1124567788899999999999 6667765
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-25 Score=218.03 Aligned_cols=195 Identities=21% Similarity=0.359 Sum_probs=157.0
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
-|.+.++||+|+||.|||+.++ .|+.+|||.+.- ....+++.+|+.+|++.+.|++|++||.+.....++||||||.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 4778899999999999999864 689999998753 3467899999999999999999999999999999999999999
Q ss_pred CCChhhhh---------------------------------------------------ccccceeEecCCCccccccee
Q 004345 575 NKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 575 ~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
.|++.+.+ +|||.|..+.. .-...+.+
T Consensus 112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD--TMAKRNTV 189 (502)
T KOG0574|consen 112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD--TMAKRNTV 189 (502)
T ss_pred CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhh--hHHhhCcc
Confidence 99987752 49999976642 22345668
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc--ccccCCCCH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD--PLISESGFK 681 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~l~~~~~~ 681 (760)
.||+.|||||++..-.|+.++||||+|++..||..|++|+...++-... -++. |.-.-..+.
T Consensus 190 IGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI----------------FMIPT~PPPTF~KPE 253 (502)
T KOG0574|consen 190 IGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI----------------FMIPTKPPPTFKKPE 253 (502)
T ss_pred ccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee----------------EeccCCCCCCCCChH
Confidence 9999999999999999999999999999999999999998754432111 1111 110011123
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.-...+-+++..|+-.+|++|-|+.++++
T Consensus 254 ~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 254 EWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred hhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 33467888999999999999999988876
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.5e-24 Score=228.46 Aligned_cols=193 Identities=19% Similarity=0.271 Sum_probs=141.8
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
+.||+|+||.||+++.. +++.||+|++++. .....+.+.+|+.++.++ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999964 6789999999754 223445678899988776 799999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..++ +|||+++...... .......|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~~~~~~~g 158 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCG 158 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--CccccccC
Confidence 9997652 4999987532211 12234578
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccc--cccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEF--ELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
|+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+.......... . .+...
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~----~p~~~ 228 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------R----IPRSL 228 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC------C----CCCCC
Confidence 999999999999999999999999999999999999986322111 11111222221111111 0 11112
Q ss_pred HHHHHHHHHhcccCCcCCCCCH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNM 705 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~ 705 (760)
...+.+++.+||+.||++||++
T Consensus 229 ~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 229 SVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CHHHHHHHHHHhcCCHHHcCCC
Confidence 3456788899999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=225.54 Aligned_cols=213 Identities=23% Similarity=0.315 Sum_probs=148.0
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|.+.++||+|+||.||+|+.. +++.||+|.++... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56888999999999999999865 67889999987543 23345688999999999999999999999999999999999
Q ss_pred cCCCChhhh---------------------------------------------------hccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
+++ +|.++ |+|||+++....... ...
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~ 162 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK--TYS 162 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc--ccc
Confidence 975 55443 249999876432221 122
Q ss_pred eeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH--------HHhccCCCcccccc
Q 004345 602 RLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA--------WKLWNDNNVIDLVD 672 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~d 672 (760)
...+++.|+|||.+.+ ..++.++|||||||++|||++|+.||......+........ +..+.........+
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07872 163 NEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYN 242 (309)
T ss_pred cccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhh
Confidence 3467899999999865 46899999999999999999999998644322211111100 00000000000000
Q ss_pred -ccccCC----CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 -PLISES----GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 -~~l~~~----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+..... ........+.+++.+|++.||.+|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 243 FPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred cCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000000 00011235678999999999999999999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=217.88 Aligned_cols=199 Identities=22% Similarity=0.350 Sum_probs=152.7
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|+..+.||+|+||.||.++. .+++.+++|.+... .....+++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 578889999999999999984 46889999988643 234456799999999999999999999999999999999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+++++|.+++ +|||+++....... ..
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~--~~ 158 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS--MA 158 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc--cc
Confidence 9999988753 38888876543321 22
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....+++.|+|||.+.+..++.++||||||+++|||++|+.|+...... ....... .+..... .
T Consensus 159 ~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~-~~~~~~~---------~ 222 (256)
T cd08221 159 ETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL------NLVVKIV-QGNYTPV---------V 222 (256)
T ss_pred cccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHH-cCCCCCC---------c
Confidence 3356889999999998888999999999999999999999998532211 1111111 1111110 1
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 712 (760)
......+.+++.+||+.+|++||++.++++.+
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 223 SVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred cccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 11234577888999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=220.04 Aligned_cols=200 Identities=27% Similarity=0.399 Sum_probs=143.8
Q ss_pred cccccCCceeEEEEEec----CCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEe-CCeeEEEEeccC
Q 004345 501 NKLGQGGFGPVYKGKLQ----DGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE-REENMLIYEYMP 574 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~-~~~~~lV~Ey~~ 574 (760)
+.||+|+||.||+|... ....||+|++... .....+.+.+|+.+++.++||||+++++++.. ++..++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 2457999998643 23345689999999999999999999998764 556799999999
Q ss_pred CCChhhhh---------------------------------------------------ccccceeEecCCCcc--cccc
Q 004345 575 NKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ--AATK 601 (760)
Q Consensus 575 ~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~--~~~~ 601 (760)
+|+|.+++ +|||+++.+...... ....
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 160 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHT 160 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccc
Confidence 99997763 389988755322111 1112
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCC-CCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK-NTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...++..|+|||.+....++.++|||||||++|||++|.. |+.... ...+.... . .+.. +.. +
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~~~~---~-~~~~-----~~~----~ 224 (262)
T cd05058 161 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD---SFDITVYL---L-QGRR-----LLQ----P 224 (262)
T ss_pred cCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHH---h-cCCC-----CCC----C
Confidence 3345778999999988899999999999999999999654 443211 11111111 1 1100 000 0
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
......+.+++..||+.+|++||++.+|+++|++..
T Consensus 225 ~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 225 EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 111245778999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-23 Score=224.03 Aligned_cols=190 Identities=24% Similarity=0.321 Sum_probs=140.6
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhc-CCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISN-LQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~-l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
++||+|+||.||+|+.. +++.||||+++.. .....+.+..|..++.. .+||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999964 5788999999753 22344556777777765 4899999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..++ +|||+++...... .......|
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~g 158 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKASTFCG 158 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--CccccccC
Confidence 9997652 4999998643222 22334679
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
|+.|+|||.+.+..++.++|||||||++|||++|+.||....... + ....... .+.+.. ....
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~---~---~~~i~~~-------~~~~~~----~~~~ 221 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE---L---FDSILND-------RPHFPR----WISK 221 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH---H---HHHHHcC-------CCCCCC----CCCH
Confidence 999999999999899999999999999999999999986432211 1 1111100 011111 1123
Q ss_pred HHHHHHHhcccCCcCCCCCHH-HHH
Q 004345 686 RCVNVGLLCVQEFVKDRPNMP-TVV 709 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~~-ev~ 709 (760)
.+.+++.+||+.||++||++. +++
T Consensus 222 ~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 222 EAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHH
Confidence 466788899999999999876 443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.6e-24 Score=223.80 Aligned_cols=210 Identities=21% Similarity=0.371 Sum_probs=153.0
Q ss_pred cCHHHHHHhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEE-
Q 004345 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCV- 561 (760)
Q Consensus 485 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~- 561 (760)
+.++.+..+.++|++.+.||+|+||.||++... +++.+|+|.++.. .....++.+|+.++.++ +||||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 345667778899999999999999999999864 5789999988643 22346788999999999 6999999999985
Q ss_pred ----eCCeeEEEEeccCCCChhhhh------------------------------------------------------c
Q 004345 562 ----EREENMLIYEYMPNKSLDSFL------------------------------------------------------F 583 (760)
Q Consensus 562 ----~~~~~~lV~Ey~~~gsL~~~L------------------------------------------------------~ 583 (760)
.++..++||||+++++|.+++ .
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEc
Confidence 345689999999999986542 3
Q ss_pred cccceeEecCCCcccccceeeeeccccCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME-----GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA 658 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~ 658 (760)
|||+++.+..... ......|++.|+|||.+.. ..++.++|||||||++|||++|+.|+........ .
T Consensus 167 dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~------~ 238 (286)
T cd06638 167 DFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA------L 238 (286)
T ss_pred cCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH------H
Confidence 8998876532221 1223468999999999853 4478999999999999999999999864322110 0
Q ss_pred HHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 659 WKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 659 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
... .........++ ......+.+++.+||+.||++|||+.||++.
T Consensus 239 ~~~-~~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 239 FKI-PRNPPPTLHQP-------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred hhc-cccCCCcccCC-------CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 000 00000011111 0112357789999999999999999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-24 Score=219.71 Aligned_cols=197 Identities=19% Similarity=0.351 Sum_probs=157.3
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
..+|++.+.||+|.||.|-++.. ..|+.||||.+++. +.+..-.+.+|++||+.|+||||+.++.+|+..+...||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 35788899999999999999985 67999999999865 334455788999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||..+|.|++|| +||||+..+... ..
T Consensus 132 MEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~---kf 208 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK---KF 208 (668)
T ss_pred EEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc---cH
Confidence 9999999999985 399999876432 23
Q ss_pred cceeeeeccccCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFS-EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s-~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
....+|++-|.+||++.+.+|. +.+|-||+||+||.|+.|..||+..... .++ +....+...+--
T Consensus 209 LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk---~lv----rQIs~GaYrEP~------- 274 (668)
T KOG0611|consen 209 LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK---RLV----RQISRGAYREPE------- 274 (668)
T ss_pred HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH---HHH----HHhhcccccCCC-------
Confidence 4468999999999999998875 8899999999999999999999743221 111 122223222211
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.......++.|+|..||++|-|+.+|...
T Consensus 275 ----~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 275 ----TPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred ----CCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 12234457788999999999999999874
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.5e-24 Score=225.43 Aligned_cols=203 Identities=23% Similarity=0.343 Sum_probs=156.7
Q ss_pred HhccccccccccccCCceeEEEEE-ecCCcEEEEEEecccC---ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCee
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~ 566 (760)
+..++|.+.+.||+|+|++|++|+ ...++.+|||++.+.. ....+-..+|-.+|.+| .||.|++|+--|.++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 345678889999999999999999 4578999999997642 23344567899999999 899999999999999999
Q ss_pred EEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCc
Q 004345 567 MLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~ 596 (760)
|+|+||++||+|.++| +|||-|+.+...+.
T Consensus 150 YFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~ 229 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQK 229 (604)
T ss_pred EEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhc
Confidence 9999999999998874 39999998864322
Q ss_pred c---------ccc--ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC
Q 004345 597 Q---------AAT--KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN 665 (760)
Q Consensus 597 ~---------~~~--~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (760)
. ... ...+||..|.+||++.....++.+|+|+|||+||.|+.|.+||...++.. ....+
T Consensus 230 ~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl---iFqkI------- 299 (604)
T KOG0592|consen 230 SQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL---IFQKI------- 299 (604)
T ss_pred cccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH---HHHHH-------
Confidence 1 112 45899999999999999999999999999999999999999996433211 00000
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 666 NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 666 ~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.+ ++-.+...+ .+.+.+|+.+.|..||.+|+|..||-+.
T Consensus 300 --~~-l~y~fp~~f----p~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 300 --QA-LDYEFPEGF----PEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred --HH-hcccCCCCC----CHHHHHHHHHHHccCccccccHHHHhhC
Confidence 00 011111112 2455667778888999999999998773
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=226.03 Aligned_cols=191 Identities=25% Similarity=0.333 Sum_probs=142.2
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhc-CCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISN-LQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~-l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
+.||+|+||.||+|... +++.||||+++... ....+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 57899999997542 2344567788888876 4899999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..+| +|||+++...... .......|
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g 158 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--AKTCTFCG 158 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--CceeeecC
Confidence 9997653 3999987532211 12234578
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
|+.|||||++.+..++.++|||||||++|||++|+.||...... .+.... ... .+.... ....
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---~~~~~i----~~~------~~~~~~----~~~~ 221 (316)
T cd05619 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE---ELFQSI----RMD------NPCYPR----WLTR 221 (316)
T ss_pred CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH---HHHHHH----HhC------CCCCCc----cCCH
Confidence 99999999999989999999999999999999999998643211 111111 100 011111 1123
Q ss_pred HHHHHHHhcccCCcCCCCCHH-HHHH
Q 004345 686 RCVNVGLLCVQEFVKDRPNMP-TVVS 710 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~~-ev~~ 710 (760)
.+.+++.+||+.||++||++. ++.+
T Consensus 222 ~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 222 EAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred HHHHHHHHHhccCHhhcCCChHHHHc
Confidence 567888999999999999997 5543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=219.91 Aligned_cols=201 Identities=25% Similarity=0.448 Sum_probs=149.1
Q ss_pred ccccccccccCCceeEEEEEecCCcEEEEEEecccCc------cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASG------QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~------~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
+|+..+.||+|+||.||+|...+++.+|||.+..... ...+.+.+|++++++++|+||+++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4677899999999999999988899999998864321 1235688999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCC----
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQ---- 595 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~---- 595 (760)
+||+++++|.++| .|||+++......
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (265)
T cd06631 81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT 160 (265)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccc
Confidence 9999999998763 3788776542111
Q ss_pred cccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 596 DQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
.........++..|+|||.+....++.++|||||||+++||++|+.||........ . ......... .+.+
T Consensus 161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-----~-~~~~~~~~~----~~~~ 230 (265)
T cd06631 161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-----M-FYIGAHRGL----MPRL 230 (265)
T ss_pred ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-----H-HHhhhccCC----CCCC
Confidence 01112234688899999999988899999999999999999999999863221100 0 000000000 0111
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. ......+.+++.+||+.+|++||++.++++
T Consensus 231 ~----~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 231 P----DSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred C----CCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1 112345678889999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=218.38 Aligned_cols=196 Identities=31% Similarity=0.424 Sum_probs=147.6
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEE-eCCeeEEEEecc
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCV-EREENMLIYEYM 573 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~-~~~~~~lV~Ey~ 573 (760)
++|++.+.||+|+||.||++... +..||+|.++.. ...+.|.+|+.++++++|+|++++++++. .++..++|+||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46788899999999999999865 788999998643 33567999999999999999999999865 445789999999
Q ss_pred CCCChhhhh----------------------------------------------------ccccceeEecCCCcccccc
Q 004345 574 PNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 574 ~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++++|.+++ +|||+++...... .
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-----~ 157 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----D 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC-----C
Confidence 999987653 3888887543221 1
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...++..|+|||.+....++.++||||||+++|||++ |+.|+..... ...... ...+.... ..
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~------~~~~~~-~~~~~~~~---------~~ 221 (256)
T cd05082 158 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL------KDVVPR-VEKGYKMD---------AP 221 (256)
T ss_pred CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH------HHHHHH-HhcCCCCC---------CC
Confidence 2234568999999998889999999999999999998 8888753211 111111 11111000 11
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
......+.+++.+|++.+|++|||+.+++++|++
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 222 DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 1123467788999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=221.73 Aligned_cols=188 Identities=23% Similarity=0.327 Sum_probs=136.5
Q ss_pred ccccCCceeEEEEEecC-------------------------CcEEEEEEecccCccchHhHHHHHHHHhcCCCCcccee
Q 004345 502 KLGQGGFGPVYKGKLQD-------------------------GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRL 556 (760)
Q Consensus 502 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l 556 (760)
.||+|+||.||+|.+.. ...||+|.+.........+|.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 23589999876544455689999999999999999999
Q ss_pred eeEEEeCCeeEEEEeccCCCChhhhhc-----------------------------------------------------
Q 004345 557 LGCCVEREENMLIYEYMPNKSLDSFLF----------------------------------------------------- 583 (760)
Q Consensus 557 ~g~~~~~~~~~lV~Ey~~~gsL~~~L~----------------------------------------------------- 583 (760)
+++|.+....++||||+++|+|..++.
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~ 161 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSP 161 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccc
Confidence 999999999999999999999977641
Q ss_pred -----cccceeEecCCCcccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHH-hCCCCCCCCcccccccHHH
Q 004345 584 -----DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIV-SGRKNTSFYHEEFELTLLG 656 (760)
Q Consensus 584 -----DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~Ell-tG~~p~~~~~~~~~~~~~~ 656 (760)
|||++.... ......++..|+|||.+.. ..++.++|||||||++|||+ +|+.|+....... ...
T Consensus 162 ~~kl~d~g~~~~~~------~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~ 232 (274)
T cd05076 162 FIKLSDPGVSFTAL------SREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE---KER 232 (274)
T ss_pred eeeecCCccccccc------cccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH---HHH
Confidence 233322110 1112346788999999875 56899999999999999995 6888875332211 011
Q ss_pred HHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 657 YAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 657 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
.. ... ..+.. .....+.+++.+||+.+|++|||+.+|++.|.
T Consensus 233 ~~----~~~-------~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 233 FY----EKK-------HRLPE----PSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HH----Hhc-------cCCCC----CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 00 000 00011 11235778999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=218.58 Aligned_cols=197 Identities=23% Similarity=0.363 Sum_probs=150.1
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|++.+.||+|+||.||++.. .+++.||+|++... .....+++.+|+.++++++||||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 478889999999999999985 46889999998643 233456899999999999999999999999999999999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+++++|.+++ .|||++........ ..
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~--~~ 158 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE--LA 158 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh--hh
Confidence 9999886642 38888776533221 11
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....|++.|+|||......++.++|||||||+++||++|+.|+...... ....... .+... . .+
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~-~~~~~-----~----~~ 222 (256)
T cd08218 159 RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK------NLVLKII-RGSYP-----P----VS 222 (256)
T ss_pred hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH------HHHHHHh-cCCCC-----C----Cc
Confidence 2345788999999999889999999999999999999999998532211 1111111 11110 0 11
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......+.+++.+||+.+|.+||+|.+|++
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 223 SHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 112345778889999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=221.87 Aligned_cols=193 Identities=24% Similarity=0.300 Sum_probs=143.6
Q ss_pred cccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 503 LGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 503 lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
||+|+||+||++... +++.+|+|++.... ....+.+..|++++++++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999854 68899999986432 22345678999999999999999999999999999999999999998
Q ss_pred hhhh------------------------------------------------------ccccceeEecCCCcccccceee
Q 004345 579 DSFL------------------------------------------------------FDFGLARIFGGNQDQAATKRLV 604 (760)
Q Consensus 579 ~~~L------------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 604 (760)
..++ +|||+++.+..... ......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~ 158 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTKGYA 158 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--cccccC
Confidence 6432 39999886643322 223357
Q ss_pred eeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHH
Q 004345 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684 (760)
Q Consensus 605 gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 684 (760)
||+.|+|||.+.+..++.++|||||||++|||++|+.||......... ........ .... ..+....
T Consensus 159 g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~---------~~~~--~~~~~~~ 225 (280)
T cd05608 159 GTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--KELKQRIL---------NDSV--TYPDKFS 225 (280)
T ss_pred CCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH--HHHHHhhc---------ccCC--CCcccCC
Confidence 899999999999999999999999999999999999998643221110 00000000 0000 0111223
Q ss_pred HHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 685 IRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 685 ~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
..+.+++.+||+.||++|| +++++++
T Consensus 226 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 226 PASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 4577888999999999999 6677775
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-23 Score=219.88 Aligned_cols=195 Identities=23% Similarity=0.296 Sum_probs=143.4
Q ss_pred cccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 503 LGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 503 lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
||+|+||.||+++.. +++.+|+|++.... ....+.+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999854 68999999986432 12334567799999999999999999999999999999999999999
Q ss_pred hhhh----------------------------------------------------ccccceeEecCCCcccccceeeee
Q 004345 579 DSFL----------------------------------------------------FDFGLARIFGGNQDQAATKRLVGT 606 (760)
Q Consensus 579 ~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt 606 (760)
..++ +|||++....... ......|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~ 157 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQRAGT 157 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeeccCCC
Confidence 6542 3999987654322 11234688
Q ss_pred ccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHH
Q 004345 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIR 686 (760)
Q Consensus 607 ~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 686 (760)
..|+|||++....++.++|||||||++|||++|+.|+........ ......... ... +.. .. ......
T Consensus 158 ~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~~-~~~----~~~--~~---~~~~~~ 225 (277)
T cd05607 158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA--KEELKRRTL-EDE----VKF--EH---QNFTEE 225 (277)
T ss_pred CCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh--HHHHHHHhh-ccc----ccc--cc---ccCCHH
Confidence 999999999988899999999999999999999999864322111 111111111 000 000 00 011235
Q ss_pred HHHHHHhcccCCcCCCCCHHHHHHHH
Q 004345 687 CVNVGLLCVQEFVKDRPNMPTVVSML 712 (760)
Q Consensus 687 ~~~l~~~Cl~~~P~~RPt~~ev~~~L 712 (760)
+.+++.+||+.||++||++.|+++.+
T Consensus 226 ~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 226 SKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHHHHHHhccCHhhCCCCccchhhh
Confidence 67888999999999999998776543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=218.67 Aligned_cols=197 Identities=29% Similarity=0.427 Sum_probs=147.6
Q ss_pred cccccCCceeEEEEEecC--C--cEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQD--G--QEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~--~--~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
++||+|++|.||+|.+.. + ..||||.+..... ...+.|.+|+.++++++||||+++++.+.. ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998643 2 3699999986654 556789999999999999999999999988 889999999999
Q ss_pred CChhhhh----------------------------------------------------ccccceeEecCCCcc-cccce
Q 004345 576 KSLDSFL----------------------------------------------------FDFGLARIFGGNQDQ-AATKR 602 (760)
Q Consensus 576 gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~-~~~~~ 602 (760)
++|.++| .|||+++.+...... .....
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH 159 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence 9987653 389988876432211 11122
Q ss_pred eeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 603 LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
..++..|+|||.+....++.++||||||+++|||++ |+.|+......+ ...... ....... .+.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~---~~~~~~~---------~~~ 224 (257)
T cd05040 160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ---ILKKID---KEGERLE---------RPE 224 (257)
T ss_pred CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH---hcCCcCC---------CCc
Confidence 456789999999998899999999999999999999 999985332211 111111 0110000 011
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
.....+.+++.+|++.+|++||++.+|++.|.
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 225 ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 12346778999999999999999999999884
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.4e-24 Score=212.26 Aligned_cols=229 Identities=19% Similarity=0.249 Sum_probs=157.9
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeC--CeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~lV 569 (760)
+.|+.++.|++|.||.||+|+. ++++.||+|+++.... ..--.-++|+.+|.+++|||||.+..+.... +..|||
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 5678889999999999999995 4688999999974321 1122468999999999999999999987643 468999
Q ss_pred EeccCCCChhhh---------------------------------------------------hccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~ 598 (760)
||||++ +|..+ |+||||||.++.. ..
T Consensus 156 Me~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp--~k 232 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP--LK 232 (419)
T ss_pred HHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC--cc
Confidence 999975 33322 2599999988643 23
Q ss_pred ccceeeeeccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCc-----ccccc
Q 004345 599 ATKRLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNV-----IDLVD 672 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~d 672 (760)
..+..+-|..|.|||.+.+.+ |+...|+||+||++.||+++++-|....+-++.+.+-.......+... ...+.
T Consensus 233 ~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k 312 (419)
T KOG0663|consen 233 PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVK 312 (419)
T ss_pred cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhh
Confidence 345578899999999998764 999999999999999999999888654443333222111100011100 00000
Q ss_pred ---------ccccCCCCHH-HHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCCCCCCCcee
Q 004345 673 ---------PLISESGFKM-EIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAFT 728 (760)
Q Consensus 673 ---------~~l~~~~~~~-~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~~p~~p~~~ 728 (760)
..++..+... -.+.-.+++...+..||.+|.|+.|.++. +-..+.|.|..|.++
T Consensus 313 ~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h--~~F~e~P~p~~P~~~ 376 (419)
T KOG0663|consen 313 KMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH--EYFRETPLPIDPSMF 376 (419)
T ss_pred ccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc--cccccCCCCCChhhc
Confidence 0111111111 11445667777888999999999998873 444677777777654
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.9e-24 Score=228.22 Aligned_cols=186 Identities=25% Similarity=0.322 Sum_probs=140.8
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
+.||+|+||.||+|+.. +++.||||++.+. .....+.+.+|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 5789999998753 233456788899998876 699999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..++ +|||+++...... .......|
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~~~~~~~g 158 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--KTTSTFCG 158 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--Cccccccc
Confidence 9997652 3999987542211 12234578
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
|+.|||||++....++.++|||||||++|||++|+.||...... .+. .....+.. .+ +.....
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~---~~~----~~i~~~~~------~~----~~~~~~ 221 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED---DLF----EAILNDEV------VY----PTWLSQ 221 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---HHH----HHHhcCCC------CC----CCCCCH
Confidence 99999999999999999999999999999999999998643221 111 11111110 00 011124
Q ss_pred HHHHHHHhcccCCcCCCCCH
Q 004345 686 RCVNVGLLCVQEFVKDRPNM 705 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~ 705 (760)
.+.+++.+|++.||++||++
T Consensus 222 ~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHHcccCHHHCCCC
Confidence 56788899999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=220.81 Aligned_cols=197 Identities=28% Similarity=0.392 Sum_probs=143.1
Q ss_pred cccccCCceeEEEEEecC-Cc--EEEEEEeccc-CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQD-GQ--EIAVKRLSKA-SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~-~~--~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
+.||+|+||.||+|+..+ +. .+|+|.++.. .....+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999999753 33 5788988743 234456899999999999 799999999999999999999999999
Q ss_pred CChhhhh------------------------------------------------------------------cccccee
Q 004345 576 KSLDSFL------------------------------------------------------------------FDFGLAR 589 (760)
Q Consensus 576 gsL~~~L------------------------------------------------------------------~DFGla~ 589 (760)
|+|.++| +|||+++
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence 9886442 3777765
Q ss_pred EecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcc
Q 004345 590 IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVI 668 (760)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (760)
.... .........+..|+|||++....++.++|||||||++|||++ |..||...... ... .....+...
T Consensus 161 ~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~------~~~-~~~~~~~~~ 230 (270)
T cd05047 161 GQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------ELY-EKLPQGYRL 230 (270)
T ss_pred ccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH------HHH-HHHhCCCCC
Confidence 3211 111111223567999999988889999999999999999997 99988532111 111 111111100
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 669 DLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 669 ~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
+ ........+.+++.+||+.+|.+|||+.+++++|++++
T Consensus 231 ~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 231 E---------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred C---------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 0 01112245778999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=226.29 Aligned_cols=191 Identities=23% Similarity=0.306 Sum_probs=144.1
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
+.||+|+||.||++... +++.||||++++. .....+.+.+|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 5789999999753 233456778899999888 799999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..++ +|||+++...... .......|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g 158 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--VTTSTFCG 158 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC--Ccccceec
Confidence 9997542 4999887532111 12234578
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
++.|+|||++.+..++.++|||||||++|||++|+.||...... ... ........ ... .....
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~---~~~----~~i~~~~~------~~~----~~~~~ 221 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED---ELF----QSILEDEV------RYP----RWLSK 221 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH---HHH----HHHHcCCC------CCC----CcCCH
Confidence 99999999999999999999999999999999999998633211 111 11111110 011 11124
Q ss_pred HHHHHHHhcccCCcCCCCCH-----HHHHH
Q 004345 686 RCVNVGLLCVQEFVKDRPNM-----PTVVS 710 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~-----~ev~~ 710 (760)
.+.+++.+||+.||++||++ .++++
T Consensus 222 ~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 222 EAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 56788899999999999999 77765
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-23 Score=217.76 Aligned_cols=199 Identities=24% Similarity=0.417 Sum_probs=148.7
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccCcc---------chHhHHHHHHHHhcCCCCccceeeeEEEeCCe
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQ---------GQEEFMNEVMVISNLQHRNLVRLLGCCVEREE 565 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---------~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~ 565 (760)
+|.+.+.||+|++|.||+|... +++.+|+|.+...... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3667789999999999999864 5789999988643221 12568899999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCC
Q 004345 566 NMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~ 595 (760)
.++|+||+++++|..++ +|||+++.+....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS 160 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence 99999999999987653 3888887664221
Q ss_pred ccc----ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccc
Q 004345 596 DQA----ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 596 ~~~----~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (760)
... ......|+..|+|||.+....++.++||||||+++|||++|+.||...... ....... . ..
T Consensus 161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~-~-----~~ 228 (267)
T cd06628 161 LSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL------QAIFKIG-E-----NA 228 (267)
T ss_pred ccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH------HHHHHHh-c-----cC
Confidence 111 111245788999999999889999999999999999999999998632211 0011100 0 11
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+.+. ......+.+++.+||+.||.+||++.+|++
T Consensus 229 ~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 229 SPEIP----SNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CCcCC----cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11111 112345678888999999999999999976
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=236.28 Aligned_cols=207 Identities=19% Similarity=0.279 Sum_probs=142.7
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeC--------
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER-------- 563 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~-------- 563 (760)
..++|++.+.||+|+||.||+|.. .+++.||||++... .....+|+.+|++++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 456799999999999999999996 46889999988542 22345799999999999999999987432
Q ss_pred CeeEEEEeccCCCChhhh-------------------------------------------------------hccccce
Q 004345 564 EENMLIYEYMPNKSLDSF-------------------------------------------------------LFDFGLA 588 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~-------------------------------------------------------L~DFGla 588 (760)
...++||||+++ +|..+ |+|||+|
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla 218 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSA 218 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccc
Confidence 235799999985 33221 2499999
Q ss_pred eEecCCCcccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCC-
Q 004345 589 RIFGGNQDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN- 666 (760)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~- 666 (760)
+.+..... .....||+.|||||++.+. .++.++|||||||++|||++|..||......+. +. ...+......
T Consensus 219 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~--~~-~i~~~~~~p~~ 292 (440)
T PTZ00036 219 KNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ--LV-RIIQVLGTPTE 292 (440)
T ss_pred hhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HH-HHHHHhCCCCH
Confidence 86643221 2235689999999998754 689999999999999999999999864322211 11 1111110000
Q ss_pred ---------cccc-----ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 667 ---------VIDL-----VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 667 ---------~~~~-----~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..++ ....+....+......+++++.+||+.||.+|||+.|+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 0000 0000000011112346788999999999999999999985
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=222.61 Aligned_cols=215 Identities=20% Similarity=0.359 Sum_probs=152.7
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|++.+.||+|+||.||+|..+ +++.||||+++.. .....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 46889999999999999999965 5789999998753 23345789999999999999999999999999999999999
Q ss_pred ccCCCChhhh--------------------------------------------------hccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
|++++.+..+ |+|||++........ ....
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-~~~~ 159 (288)
T cd07833 81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-SPLT 159 (288)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-cccc
Confidence 9998776543 248888876543322 1222
Q ss_pred eeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHH--------Hhcc-CCC-----
Q 004345 602 RLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAW--------KLWN-DNN----- 666 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~--------~~~~-~~~----- 666 (760)
...++..|+|||++... .++.++||||||+++|||++|+.|+................ ..+. ...
T Consensus 160 ~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07833 160 DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVA 239 (288)
T ss_pred CcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccc
Confidence 35678899999999888 78999999999999999999999886432211100000000 0000 000
Q ss_pred cccccccc-ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 667 VIDLVDPL-ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 667 ~~~~~d~~-l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..+..++. +....+......+.+++.+||+.+|++||++++|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 240 FPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000000 000111112466889999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=231.20 Aligned_cols=203 Identities=21% Similarity=0.285 Sum_probs=145.7
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.++||+|+||.||++.. .+++.||||++.+. .....+.+.+|++++++++||||+++++++.+....+|||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4688899999999999999985 47889999998643 2234567889999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCcc---
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQ--- 597 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~--- 597 (760)
||+++|+|.++| +|||+++.+......
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 160 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY 160 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 999999997653 399998643211000
Q ss_pred ---------c---------------------------------ccceeeeeccccCccccccCCCCccchhHHHHHHHHH
Q 004345 598 ---------A---------------------------------ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLE 635 (760)
Q Consensus 598 ---------~---------------------------------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~E 635 (760)
. .....+||+.|+|||++....++.++|||||||++||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 240 (377)
T cd05629 161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE 240 (377)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence 0 0012469999999999999899999999999999999
Q ss_pred HHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCC---CCHHHHHHH
Q 004345 636 IVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDR---PNMPTVVSM 711 (760)
Q Consensus 636 lltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~R---Pt~~ev~~~ 711 (760)
|++|+.||....... .. ............ ... ......+.+++.+|++ +|.+| |++.|+++.
T Consensus 241 lltG~~Pf~~~~~~~---~~---~~i~~~~~~~~~-----p~~--~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 241 CLIGWPPFCSENSHE---TY---RKIINWRETLYF-----PDD--IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhcCCCCCCCCCHHH---HH---HHHHccCCccCC-----CCC--CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 999999986432211 11 111110000000 000 0012345567777887 66665 699998874
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-23 Score=229.33 Aligned_cols=209 Identities=21% Similarity=0.268 Sum_probs=150.5
Q ss_pred HHHHhccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCC
Q 004345 489 ELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE 564 (760)
Q Consensus 489 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~ 564 (760)
++....++|++.+.||+|+||.||+++.. +++.+|+|.+.+. .....+.+.+|+.+++.++||||+++++++..+.
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 34445678999999999999999999965 5789999998642 2233456889999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhh-------------------------------------------------ccccceeEecCCC
Q 004345 565 ENMLIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~ 595 (760)
..++||||+++|+|.+++ +|||+++.+....
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 999999999999998763 4999998764222
Q ss_pred cccccceeeeeccccCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccc
Q 004345 596 DQAATKRLVGTYGYMSPEYAMEG----RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (760)
. .......||+.|||||++... .++.++||||+||++|||++|+.||...... ...............
T Consensus 197 ~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~~~- 268 (370)
T cd05621 197 M-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV------GTYSKIMDHKNSLNF- 268 (370)
T ss_pred c-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCcccCC-
Confidence 1 122345799999999998754 3789999999999999999999998633211 111111111110110
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCC--CCCHHHHHHH
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKD--RPNMPTVVSM 711 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPt~~ev~~~ 711 (760)
.. .......+.+++..|++.++.+ ||++.|+++.
T Consensus 269 ----p~--~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 269 ----PE--DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ----CC--cccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 00 0011234556667777755543 8899999885
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=231.26 Aligned_cols=211 Identities=18% Similarity=0.247 Sum_probs=147.5
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC-----eeE
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE-----ENM 567 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~-----~~~ 567 (760)
+|++.++||+|+||.||++.. .+++.||||++.... ....+++.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999995 478999999986532 234567899999999999999999999998776 789
Q ss_pred EEEeccCCCChhhh--------------------------------------------------hccccceeEecCCCcc
Q 004345 568 LIYEYMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 568 lV~Ey~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
+|+||+.+ +|..+ |+|||+++.......
T Consensus 81 lv~e~~~~-~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~- 158 (372)
T cd07853 81 VVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES- 158 (372)
T ss_pred EEeecccc-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCcc-
Confidence 99999974 45432 249999987543221
Q ss_pred cccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccc-------
Q 004345 598 AATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVID------- 669 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 669 (760)
.......+++.|+|||.+.+. .++.++|||||||++|||++|+.||......... .............+
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~i~~~~g~~~~~~~~~~~~~ 235 (372)
T cd07853 159 KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQL---DLITDLLGTPSLEAMRSACEG 235 (372)
T ss_pred ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHH---HHHHHHcCCCCHHHHHHhhHH
Confidence 122234678999999998764 4799999999999999999999998643322111 11111100000000
Q ss_pred ---ccc------ccccC--CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 670 ---LVD------PLISE--SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 670 ---~~d------~~l~~--~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.+. +.... .........+.+++.+|++.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 236 ARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000 00000 0011113567789999999999999999999873
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-23 Score=221.34 Aligned_cols=201 Identities=23% Similarity=0.367 Sum_probs=153.5
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
++|++.+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.++++++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 6788899999999999999985 467899999987555555678999999999999999999999999999999999999
Q ss_pred CCCChhhhh-------------------------------------------------ccccceeEecCCCcccccceee
Q 004345 574 PNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRLV 604 (760)
Q Consensus 574 ~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 604 (760)
++++|.+++ +|||++........ ......
T Consensus 99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~--~~~~~~ 176 (293)
T cd06647 99 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMV 176 (293)
T ss_pred CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc--cccccc
Confidence 999998652 38887765533221 122346
Q ss_pred eeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHH
Q 004345 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684 (760)
Q Consensus 605 gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 684 (760)
+++.|+|||.+....++.++||||||+++||+++|+.||.......... .....+. +.. .......
T Consensus 177 ~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~------~~~~~~~------~~~--~~~~~~~ 242 (293)
T cd06647 177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNGT------PEL--QNPEKLS 242 (293)
T ss_pred CChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee------ehhcCCC------CCC--CCccccC
Confidence 8889999999988889999999999999999999999986432211100 0000000 000 0111122
Q ss_pred HHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 685 IRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 685 ~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+.+++.+||+.+|++||++.+++.+
T Consensus 243 ~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 243 AIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 456788899999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.5e-24 Score=227.70 Aligned_cols=192 Identities=22% Similarity=0.315 Sum_probs=144.0
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
++||+|+||.||+|+.. +++.||||++++. .....+.+..|.+++..+ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999965 5789999998753 233455688899998866 799999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..+| +|||+++...... .......|
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~g 158 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VTTTTFCG 158 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCC--cccccccc
Confidence 9997542 4999987542221 12234578
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
|+.|+|||++....++.++|||||||++|||++|+.||...... .... ... .+.. . . +.....
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~---~~~~---~i~-~~~~---~---~----p~~~~~ 221 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED---DLFE---SIL-HDDV---L---Y----PVWLSK 221 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH---HHHH---HHH-cCCC---C---C----CCCCCH
Confidence 99999999999999999999999999999999999998643321 1111 111 1110 0 0 001124
Q ss_pred HHHHHHHhcccCCcCCCC-------CHHHHHHH
Q 004345 686 RCVNVGLLCVQEFVKDRP-------NMPTVVSM 711 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RP-------t~~ev~~~ 711 (760)
.+.+++..|++.||++|| ++.++++.
T Consensus 222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 567888899999999999 77777653
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-23 Score=228.88 Aligned_cols=211 Identities=21% Similarity=0.261 Sum_probs=152.8
Q ss_pred HHHHHHhccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEe
Q 004345 487 FEELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE 562 (760)
Q Consensus 487 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~ 562 (760)
+.++....++|++.+.||+|+||.||+++.. +++.+|+|++.+. .....+.+.+|+.+++.++||||+++++.+.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4455556789999999999999999999965 6789999998642 22334568899999999999999999999999
Q ss_pred CCeeEEEEeccCCCChhhhh-------------------------------------------------ccccceeEecC
Q 004345 563 REENMLIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~ 593 (760)
+...++||||+++|+|..++ +|||+++.+..
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 194 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence 99999999999999998753 49999987643
Q ss_pred CCcccccceeeeeccccCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAMEG----RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVID 669 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (760)
... .......||+.|||||++... .++.++|||||||++|||++|+.||...... ..............
T Consensus 195 ~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~~ 267 (371)
T cd05622 195 EGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMNHKNSLT 267 (371)
T ss_pred CCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCCccc
Confidence 221 122346799999999998754 3789999999999999999999998632211 11111111111111
Q ss_pred cccccccCCCCHHHHHHHHHHHHhcccCCcCC--CCCHHHHHHH
Q 004345 670 LVDPLISESGFKMEIIRCVNVGLLCVQEFVKD--RPNMPTVVSM 711 (760)
Q Consensus 670 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPt~~ev~~~ 711 (760)
..+ .......+.+++..|++.++.+ ||++.++++.
T Consensus 268 ~~~-------~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 268 FPD-------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCC-------cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 111 0112234566777888744433 7899998874
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=226.43 Aligned_cols=191 Identities=23% Similarity=0.306 Sum_probs=143.7
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCC-ccceeeeEEEeCCeeEEEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHR-NLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~-nIv~l~g~~~~~~~~~lV~ 570 (760)
+|++.+.||+|+||.||+|+.. +++.||||++.+. .....+.+..|++++..++|+ +|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999865 5788999999753 234456788999999999764 6888999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++|+|..++ +|||+++...... ...
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~ 158 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG--KTT 158 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC--Cce
Confidence 999999997652 4999987532111 122
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....||+.|+|||++....++.++|||||||++|||++|+.||...... .... ... ... ..+..
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~~---~i~-~~~------~~~~~--- 222 (324)
T cd05587 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED---ELFQ---SIM-EHN------VSYPK--- 222 (324)
T ss_pred eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHHH---HHH-cCC------CCCCC---
Confidence 3457899999999999999999999999999999999999998633221 1111 111 110 00111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNM 705 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~ 705 (760)
.....+.+++.+|++.||.+||+.
T Consensus 223 -~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 223 -SLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred -CCCHHHHHHHHHHhhcCHHHcCCC
Confidence 112456788899999999999986
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=226.70 Aligned_cols=191 Identities=24% Similarity=0.306 Sum_probs=144.0
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
+|++.+.||+|+||.||+|+.. +++.||||.+.+.. ....+.+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999865 57899999987532 23345677888888877 5899999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++|+|..++ +|||+++...... ...
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~--~~~ 158 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG--VTT 158 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC--Ccc
Confidence 999999997652 4999987542211 122
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....||+.|+|||++....++.++|||||||++|||++|+.||...... .+... .. .... . .+
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~---~~~~~---i~-~~~~------~----~p 221 (323)
T cd05616 159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELFQS---IM-EHNV------A----YP 221 (323)
T ss_pred ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH---HHHHH---HH-hCCC------C----CC
Confidence 3457899999999999999999999999999999999999998643221 11111 11 1110 0 01
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNM 705 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~ 705 (760)
......+.+++.+|++.+|++|++.
T Consensus 222 ~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 222 KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1122456788899999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=217.09 Aligned_cols=197 Identities=27% Similarity=0.407 Sum_probs=149.2
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC-----ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-----GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
+|+..+.||+|++|.||+|... +++.|++|.+.... .+..+.+.+|+.++++++|+||+++++++..+...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677799999999999999976 78999999986532 22456799999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
+||+++++|.+++ +|||++....... .
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---~ 157 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---F 157 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc---c
Confidence 9999999987663 3888877653322 1
Q ss_pred cceeeeeccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
.....++..|+|||.+.... ++.++||||||+++|||++|+.|+...... .............. +
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~-----~--- 223 (258)
T cd06632 158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV------AAVFKIGRSKELPP-----I--- 223 (258)
T ss_pred ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH------HHHHHHHhcccCCC-----c---
Confidence 22356788999999987766 899999999999999999999998643211 11111111011100 1
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+......+.+++.+||+.+|++||++.++++
T Consensus 224 -~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 224 -PDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -CCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 1112245677889999999999999999975
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-23 Score=219.21 Aligned_cols=197 Identities=23% Similarity=0.366 Sum_probs=149.5
Q ss_pred cccccccccCCceeEEEEEe-cCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 497 FQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
|++.+.||+|+||.||+|.. .+++.||+|.+.... ....+.|.+|+.++.+++||||+++++++..++..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 66778999999999999985 467899999886432 2345678999999999999999999999999999999999999
Q ss_pred CCChhhhh-------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 575 NKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 575 ~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
+++|..++ .|||+++.+.... .......+
T Consensus 86 ~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~ 163 (277)
T cd06641 86 GGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVG 163 (277)
T ss_pred CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch--hhhccccC
Confidence 99988763 3888877653221 11223467
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
+..|+|||.+....++.++|||||||++|||++|..|+...... ..... ...... +.+. .....
T Consensus 164 ~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~-~~~~~~-----~~~~----~~~~~ 227 (277)
T cd06641 164 TPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM------KVLFL-IPKNNP-----PTLE----GNYSK 227 (277)
T ss_pred CccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH------HHHHH-HhcCCC-----CCCC----cccCH
Confidence 88999999998888999999999999999999999998532211 00100 111110 1111 11234
Q ss_pred HHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 686 RCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.+.+++.+||+.+|++||++.++++.
T Consensus 228 ~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 228 PLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHhC
Confidence 56788899999999999999999984
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-23 Score=218.94 Aligned_cols=198 Identities=25% Similarity=0.341 Sum_probs=147.6
Q ss_pred cccccccccCCceeEEEEEec-CCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
|+..+.||+|+||.||++... +++.+|||.+..... ...+.+.+|+.++++++|+||+++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999864 688999999865321 2235678999999999999999999999999999999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+++++|..++ +|||++........ .
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~---~ 158 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---I 158 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc---c
Confidence 9999997653 38998876532221 1
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....|+..|+|||.+....++.++||||||+++|||++|+.||........... ....... . ......
T Consensus 159 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~---~~~~~~~--~----~~~~~~--- 226 (285)
T cd05630 159 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE---VERLVKE--V----QEEYSE--- 226 (285)
T ss_pred cCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHH---HHhhhhh--h----hhhcCc---
Confidence 234689999999999999999999999999999999999999864322111000 0000000 0 000111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCC-----HHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPN-----MPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 710 (760)
.....+.+++..||+.||++||| +.|+++
T Consensus 227 -~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 227 -KFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred -cCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 11234678888999999999999 778776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.9e-23 Score=229.18 Aligned_cols=212 Identities=16% Similarity=0.170 Sum_probs=149.0
Q ss_pred ccccccccccccCCceeEEEEEec---CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ---DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
..+|++.+.||+|+||.||++... .++.||||.+... +.+.+|++++++++|||||++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999753 3578999987542 34568999999999999999999999999999999
Q ss_pred eccCCCChhhh--------------------------------------------------hccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~ 600 (760)
|++. ++|.++ |+|||+++.+.........
T Consensus 166 e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~ 244 (392)
T PHA03207 166 PKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQC 244 (392)
T ss_pred hhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccc
Confidence 9986 455543 2499999866443333333
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcc-------cc---
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVI-------DL--- 670 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--- 670 (760)
....||+.|+|||++....++.++|||||||++|||++|+.||..............+.+........ .+
T Consensus 245 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 324 (392)
T PHA03207 245 YGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKH 324 (392)
T ss_pred cccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHH
Confidence 34679999999999999999999999999999999999999986433221111111111111100000 00
Q ss_pred ---ccccccCCCC-------HHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 671 ---VDPLISESGF-------KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 671 ---~d~~l~~~~~-------~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.......... ......+.+++.+|++.||++|||+.|++..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 325 FKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000 0012346678889999999999999999885
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-23 Score=225.58 Aligned_cols=193 Identities=20% Similarity=0.313 Sum_probs=143.5
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
+.||+|+||.||++... +++.||+|++++.. ....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999964 67899999997542 23455688999999888 699999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..++ +|||+++...... .......|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g 158 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--DTTSTFCG 158 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--CceecccC
Confidence 9997542 4999987532211 12234678
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
|+.|+|||++.+..++.++|||||||++|||++|+.||................+....... .+.. ....
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------~~p~----~~~~ 228 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI------RIPR----FLSV 228 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC------CCCC----CCCH
Confidence 99999999999999999999999999999999999999643332222222222222211110 0111 1124
Q ss_pred HHHHHHHhcccCCcCCCCCH
Q 004345 686 RCVNVGLLCVQEFVKDRPNM 705 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~ 705 (760)
.+.+++.+||+.||++||++
T Consensus 229 ~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 229 KASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred HHHHHHHHHhccCHHHcCCC
Confidence 56788889999999999985
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-23 Score=216.49 Aligned_cols=197 Identities=36% Similarity=0.526 Sum_probs=149.5
Q ss_pred cccccCCceeEEEEEecC----CcEEEEEEecccCcc-chHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQD----GQEIAVKRLSKASGQ-GQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
+.||+|+||.||+|.... +..|++|.+...... ..+.+.+|++++.+++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 479999999999999653 788999999765433 367899999999999999999999999999999999999999
Q ss_pred CChhhhh-----------------------------------------------------------ccccceeEecCCCc
Q 004345 576 KSLDSFL-----------------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 576 gsL~~~L-----------------------------------------------------------~DFGla~~~~~~~~ 596 (760)
++|.+++ +|||.++.......
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence 8886542 37888876643322
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
........++..|+|||.+....++.++||||+|++++||++ |..|+...... .+. .....+...
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~----~~~~~~~~~------- 226 (262)
T cd00192 161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE---EVL----EYLRKGYRL------- 226 (262)
T ss_pred cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH---HHH----HHHHcCCCC-------
Confidence 222334567889999999998899999999999999999999 58888643211 111 111111110
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
..+......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 227 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 --PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 011111356778999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-24 Score=230.57 Aligned_cols=188 Identities=22% Similarity=0.284 Sum_probs=142.1
Q ss_pred cccccCCceeEEEEEe----cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 501 NKLGQGGFGPVYKGKL----QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~----~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
+.||+|+||.||+++. .+++.+|+|++.... ......+.+|++++++++||||+++++++..++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 6799999999999874 367899999997542 2334567889999999999999999999999999999999999
Q ss_pred CCChhhhh--------------------------------------------------ccccceeEecCCCcccccceee
Q 004345 575 NKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLV 604 (760)
Q Consensus 575 ~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 604 (760)
+|+|.+++ +|||+++...... .......
T Consensus 82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~ 159 (318)
T cd05582 82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFC 159 (318)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--Cceeccc
Confidence 99997652 3999987653221 1223457
Q ss_pred eeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHH
Q 004345 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684 (760)
Q Consensus 605 gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 684 (760)
|++.|+|||.+....++.++|||||||++|||++|+.||...... ... .... .... .+.. ...
T Consensus 160 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~---~~~---~~i~-~~~~------~~p~----~~~ 222 (318)
T cd05582 160 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK---ETM---TMIL-KAKL------GMPQ----FLS 222 (318)
T ss_pred CChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH---HHH---HHHH-cCCC------CCCC----CCC
Confidence 899999999999888999999999999999999999998633211 111 1111 1100 0111 112
Q ss_pred HHHHHHHHhcccCCcCCCCCHHH
Q 004345 685 IRCVNVGLLCVQEFVKDRPNMPT 707 (760)
Q Consensus 685 ~~~~~l~~~Cl~~~P~~RPt~~e 707 (760)
..+.+++.+||+.||++||++.+
T Consensus 223 ~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 223 PEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHHHHHhhcCHhHcCCCCC
Confidence 45667888999999999999655
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-23 Score=217.76 Aligned_cols=189 Identities=22% Similarity=0.341 Sum_probs=137.4
Q ss_pred cccccCCceeEEEEEecC-------------CcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 501 NKLGQGGFGPVYKGKLQD-------------GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~-------------~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
+.||+|+||.||+|+... ...|++|.+..........|.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999998532 2358999887655555668899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhh----------------------------------------------------------cccccee
Q 004345 568 LIYEYMPNKSLDSFL----------------------------------------------------------FDFGLAR 589 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L----------------------------------------------------------~DFGla~ 589 (760)
+||||+++|+|..++ .|||++.
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~ 160 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI 160 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence 999999999987653 1444433
Q ss_pred EecCCCcccccceeeeeccccCccccc-cCCCCccchhHHHHHHHHHHH-hCCCCCCCCcccccccHHHHHHHhccCCCc
Q 004345 590 IFGGNQDQAATKRLVGTYGYMSPEYAM-EGRFSEKSDVFSFGVLLLEIV-SGRKNTSFYHEEFELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSfGv~l~Ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (760)
... ......++..|||||.+. ...++.++|||||||++|||+ +|+.|+......+. .... .+..
T Consensus 161 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-------~~~~-~~~~ 226 (262)
T cd05077 161 TVL------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-------ERFY-EGQC 226 (262)
T ss_pred ccc------CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-------HHHH-hcCc
Confidence 221 111235778899999987 466899999999999999998 57777643211100 0000 0000
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
... ......+.+++.+||+.||++||++.+|++.|+
T Consensus 227 -~~~---------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 227 -MLV---------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred -cCC---------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 000 011245678999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-23 Score=219.33 Aligned_cols=214 Identities=22% Similarity=0.353 Sum_probs=150.6
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++|+||+++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888999999999999999975 58899999986432 2334578899999999999999999999999999999999
Q ss_pred ccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
|++++.|..++ +|||++..+..... ...
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~ 158 (286)
T cd07847 81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD--DYT 158 (286)
T ss_pred ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc--ccc
Confidence 99998776541 38998887643321 122
Q ss_pred eeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH-H-------HhccCCCcc-ccc
Q 004345 602 RLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA-W-------KLWNDNNVI-DLV 671 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~-~-------~~~~~~~~~-~~~ 671 (760)
...++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+........ . ..+...... ...
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 3457789999999875 55889999999999999999999998643322111100000 0 000000000 000
Q ss_pred cccccCCCCH-----HHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 672 DPLISESGFK-----MEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 672 d~~l~~~~~~-----~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+......+. .....+.+++.+||+.+|++||++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000000000 11256778999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.8e-24 Score=221.54 Aligned_cols=196 Identities=23% Similarity=0.355 Sum_probs=161.3
Q ss_pred cccccccccccCCceeEEEEE-ecCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
+-|.+.+.||+|.|..|-+++ .-+|..||||++.+.. ......+.+|++.|+-++|||||+||.+...+..+|||+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 346677999999999999998 3479999999998653 3345678999999999999999999999999999999999
Q ss_pred ccCCCChhhhh----------------------------------------------------ccccceeEecCCCcccc
Q 004345 572 YMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 572 y~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
.-.+|+|++|| .|||++..+.+.+ .
T Consensus 98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~---k 174 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK---K 174 (864)
T ss_pred ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc---h
Confidence 99999999985 3999987765433 3
Q ss_pred cceeeeeccccCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFS-EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s-~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
....+|++.|-|||++.+..|+ +++||||+||+||-|++|+.||...++.+.... ++|-. ..
T Consensus 175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTm---------------ImDCK--Yt 237 (864)
T KOG4717|consen 175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTM---------------IMDCK--YT 237 (864)
T ss_pred hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhh---------------hhccc--cc
Confidence 4467999999999999999887 678999999999999999999976554433222 22221 23
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+..-..+|.+++..+|+.||.+|.+..+|+.
T Consensus 238 vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 238 VPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred CchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 34556678999999999999999999999986
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-23 Score=226.53 Aligned_cols=151 Identities=24% Similarity=0.375 Sum_probs=125.7
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||++... +++.||||++++.. ......+.+|+.++.+++|+||+++++.+.+....+|||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999854 68899999997532 233457889999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCcc---
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQ--- 597 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~--- 597 (760)
||+++|+|.++| +|||+++.+......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~ 160 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY 160 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence 999999998763 399998754321100
Q ss_pred ------------------------------cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 598 ------------------------------AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 598 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 001235799999999999999999999999999999999999999863
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-23 Score=218.13 Aligned_cols=199 Identities=22% Similarity=0.345 Sum_probs=147.7
Q ss_pred cccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
|++.+.||+|+||.||+|... ++..+++|.+........+.+.+|+++++.++||||+++++++..++..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 667799999999999999965 5778899998765555667899999999999999999999999999999999999999
Q ss_pred CChhhhh---------------------------------------------------ccccceeEecCCCcccccceee
Q 004345 576 KSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKRLV 604 (760)
Q Consensus 576 gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 604 (760)
++|..++ +|||+++...... .......
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~ 164 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QRRDSFI 164 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc--ccccccc
Confidence 9987642 3888876543221 1122356
Q ss_pred eeccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 605 GTYGYMSPEYAM-----EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 605 gt~~y~aPE~~~-----~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
++..|+|||.+. ...++.++|||||||++|||++|+.|+...... ......... .......
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~------~~~~~~~~~-~~~~~~~------- 230 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM------RVLLKIAKS-EPPTLAQ------- 230 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH------HHHHHHhhc-CCCCCCC-------
Confidence 889999999984 345788999999999999999999998533211 001111000 0000000
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
+......+.+++.+||+.||++||++.++++.
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 231 PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01112456788899999999999999998763
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=221.12 Aligned_cols=208 Identities=22% Similarity=0.400 Sum_probs=152.1
Q ss_pred cCHHHHHHhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEe
Q 004345 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562 (760)
Q Consensus 485 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~ 562 (760)
.++.++..+.+.|++.+.||+|+||.||+|.. .+++.+|+|.+.... ....++..|+.++.++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 35566667788999999999999999999996 467899999886432 3446788999999998 69999999999863
Q ss_pred ------CCeeEEEEeccCCCChhhhh----------------------------------------------------cc
Q 004345 563 ------REENMLIYEYMPNKSLDSFL----------------------------------------------------FD 584 (760)
Q Consensus 563 ------~~~~~lV~Ey~~~gsL~~~L----------------------------------------------------~D 584 (760)
....+++|||+++|+|.+++ .|
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~d 164 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVD 164 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEee
Confidence 45789999999999987653 38
Q ss_pred ccceeEecCCCcccccceeeeeccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHH
Q 004345 585 FGLARIFGGNQDQAATKRLVGTYGYMSPEYAM-----EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAW 659 (760)
Q Consensus 585 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~ 659 (760)
||+++...... .......|+..|+|||.+. ...++.++|||||||++|||++|+.|+..........
T Consensus 165 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~------ 236 (282)
T cd06636 165 FGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF------ 236 (282)
T ss_pred Ccchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh------
Confidence 88876542211 1122356889999999986 3458889999999999999999999985322111100
Q ss_pred HhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 660 KLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 660 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
... . ...+.+.. ......+.+++.+||+.||.+|||+.|+++
T Consensus 237 ~~~-~-----~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 237 LIP-R-----NPPPKLKS---KKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hHh-h-----CCCCCCcc---cccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 000 0 00011111 112246788899999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-23 Score=215.11 Aligned_cols=196 Identities=21% Similarity=0.369 Sum_probs=149.5
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|++.+.||+|+||.||++.. .+++.+|||.+... .....+.+.+|+.++++++||||+++++.+..++..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 478889999999999999985 46789999998653 234456899999999999999999999999999999999999
Q ss_pred cCCCChhhhh-----------------------------------------------------ccccceeEecCCCcccc
Q 004345 573 MPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 573 ~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
+++++|.+++ .|||+++...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~---~ 157 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS---K 157 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc---c
Confidence 9999987653 2777776553222 1
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....++..|+|||.+....++.++||||||+++|||++|+.|+...... ..+..... +..... .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~------~~~~~~~~-~~~~~~-----~--- 222 (256)
T cd08220 158 AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP------ALVLKIMS-GTFAPI-----S--- 222 (256)
T ss_pred ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH------HHHHHHHh-cCCCCC-----C---
Confidence 12346788999999999888999999999999999999999998532211 11111111 111011 1
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......+.+++.+||+.+|++|||+.|+++
T Consensus 223 -~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 223 -DRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -CCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 112345778889999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=232.73 Aligned_cols=150 Identities=26% Similarity=0.420 Sum_probs=123.9
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
+|++.++||+|+||.||+|+. .+++.||+|++.+.. ....+.+.+|+.++++++|||||++++.+.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588899999999999999995 467899999987532 2334578899999999999999999999999999999999
Q ss_pred ccCCCChhhhh--------------------------------------------------ccccceeEecCCCc-----
Q 004345 572 YMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD----- 596 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~----- 596 (760)
|+++|+|.++| +|||+++.+.....
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~ 161 (382)
T cd05625 82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (382)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence 99999997653 39999754311000
Q ss_pred ----------------------------------------ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHH
Q 004345 597 ----------------------------------------QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEI 636 (760)
Q Consensus 597 ----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~El 636 (760)
.......+||+.|||||++....++.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el 241 (382)
T cd05625 162 SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 241 (382)
T ss_pred cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence 0011234789999999999999999999999999999999
Q ss_pred HhCCCCCCC
Q 004345 637 VSGRKNTSF 645 (760)
Q Consensus 637 ltG~~p~~~ 645 (760)
++|+.||..
T Consensus 242 ltG~~Pf~~ 250 (382)
T cd05625 242 LVGQPPFLA 250 (382)
T ss_pred HhCCCCCCC
Confidence 999999964
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-23 Score=221.36 Aligned_cols=210 Identities=21% Similarity=0.311 Sum_probs=146.9
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.++||+|+||.||+|+.. +++.||+|.+.... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56888999999999999999865 67899999986442 33345688999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++ ++|..++ +|||+++....... ...
T Consensus 86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~ 162 (301)
T cd07873 86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK--TYS 162 (301)
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC--ccc
Confidence 97 4665432 38998875432211 112
Q ss_pred eeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc---CCCcccccc-----
Q 004345 602 RLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN---DNNVIDLVD----- 672 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d----- 672 (760)
...+++.|+|||.+... .++.++|||||||++|||++|+.||......+. ......... ......+++
T Consensus 163 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
T cd07873 163 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ---LHFIFRILGTPTEETWPGILSNEEFK 239 (301)
T ss_pred ccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCChhhchhhhcccccc
Confidence 34578899999998654 588999999999999999999999864332211 111111100 000000000
Q ss_pred ----ccccCCC----CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 ----PLISESG----FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ----~~l~~~~----~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+...... .......+.+++.+|++.||.+|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000 0011235678899999999999999999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.5e-24 Score=232.91 Aligned_cols=152 Identities=25% Similarity=0.402 Sum_probs=124.9
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+++.. +++.||||++.+.. ....+.+.+|++++.+++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999954 68899999986432 233567889999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCc----
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD---- 596 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~---- 596 (760)
||+++|+|.++| +|||+|..+.....
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~ 160 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence 999999998763 39999753310000
Q ss_pred -------------------------------------ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhC
Q 004345 597 -------------------------------------QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG 639 (760)
Q Consensus 597 -------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG 639 (760)
.......+||+.|||||++....++.++|||||||++|||++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G 240 (376)
T cd05598 161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 240 (376)
T ss_pred ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC
Confidence 0001134799999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 004345 640 RKNTSFY 646 (760)
Q Consensus 640 ~~p~~~~ 646 (760)
+.||...
T Consensus 241 ~~Pf~~~ 247 (376)
T cd05598 241 QPPFLAD 247 (376)
T ss_pred CCCCCCC
Confidence 9999643
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.4e-24 Score=245.09 Aligned_cols=212 Identities=28% Similarity=0.405 Sum_probs=161.4
Q ss_pred HHHHhccccccccccccCCceeEEEEEec--------CCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeee
Q 004345 489 ELANATNNFQLANKLGQGGFGPVYKGKLQ--------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLG 558 (760)
Q Consensus 489 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g 558 (760)
.++...+++.+.+.||+|.||.|++|... ....||||.++... ....+.+..|+++|+.+ +|+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 45555666677789999999999999843 14579999998543 34567899999999999 6999999999
Q ss_pred EEEeCCeeEEEEeccCCCChhhhh--------------------------------------------------------
Q 004345 559 CCVEREENMLIYEYMPNKSLDSFL-------------------------------------------------------- 582 (760)
Q Consensus 559 ~~~~~~~~~lV~Ey~~~gsL~~~L-------------------------------------------------------- 582 (760)
+|...+..++|+||++.|+|..+|
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNV 449 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNV 449 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhE
Confidence 999999999999999999886542
Q ss_pred ----------ccccceeEecCCCcccccceee--eeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCccc
Q 004345 583 ----------FDFGLARIFGGNQDQAATKRLV--GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEE 649 (760)
Q Consensus 583 ----------~DFGla~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~ 649 (760)
+|||+||............ .. -+..|||||.+....|+.|+|||||||+||||+| |..|+......
T Consensus 450 Li~~~~~~kIaDFGlar~~~~~~~y~~~~-~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 450 LITKNKVIKIADFGLARDHYNKDYYRTKS-SAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred EecCCCEEEEccccceeccCCCCceEecC-CCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 3999999765544433221 12 3567999999999999999999999999999999 77787531111
Q ss_pred ccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 650 FELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.+ +.+..++|...+ .+.....++.++|..||+.+|++||++.++++.++..+
T Consensus 529 -----~~-l~~~l~~G~r~~---------~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 529 -----EE-LLEFLKEGNRME---------QPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred -----HH-HHHHHhcCCCCC---------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 11 122333333221 22233567789999999999999999999999998854
|
|
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-23 Score=218.71 Aligned_cols=204 Identities=24% Similarity=0.343 Sum_probs=147.2
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc---c-------chHhHHHHHHHHhcCCCCccceeeeEEEeCC
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG---Q-------GQEEFMNEVMVISNLQHRNLVRLLGCCVERE 564 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~-------~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~ 564 (760)
+|.+.+.||+|+||.||+|.. .+++.||+|.++.... . ..+.+.+|+.++++++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 466779999999999999985 4688999998853211 1 1246888999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCC
Q 004345 565 ENMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGN 594 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~ 594 (760)
..++||||+++++|.+++ +|||+++.....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 161 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI 161 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence 999999999999987653 388887654322
Q ss_pred CcccccceeeeeccccCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 595 QDQAATKRLVGTYGYMSPEYAMEGR--FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
..........++..|+|||.+.... ++.++||||||+++||+++|..|+...... ......... .....++
T Consensus 162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~-~~~~~~~ 234 (272)
T cd06629 162 YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI------AAMFKLGNK-RSAPPIP 234 (272)
T ss_pred ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH------HHHHHhhcc-ccCCcCC
Confidence 2122223356788999999987654 889999999999999999999998522111 111111111 1111111
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.. ........+.+++.+||+.+|++||++.+|++
T Consensus 235 ~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 235 PD----VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cc----ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 11 11112356778889999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-23 Score=215.15 Aligned_cols=199 Identities=35% Similarity=0.550 Sum_probs=149.3
Q ss_pred cccccccccCCceeEEEEEecC-----CcEEEEEEecccCcc-chHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 497 FQLANKLGQGGFGPVYKGKLQD-----GQEIAVKRLSKASGQ-GQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
+++.+.||+|+||.||+++... +..||+|.+...... ..+.+.+|+.++.+++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999999653 378999999755433 5678999999999999999999999999999999999
Q ss_pred eccCCCChhhhh----------------------------------------------------ccccceeEecCCCccc
Q 004345 571 EYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 571 Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||+++++|.+++ +|||+++.........
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK 160 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence 999999987652 3888887664332221
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
.. ...+++.|+|||.+....++.++||||+|++++||++ |+.|+..... ....... ..+....
T Consensus 161 ~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~----~~~~~~~-------- 224 (258)
T smart00219 161 KK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN---EEVLEYL----KKGYRLP-------- 224 (258)
T ss_pred cc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHH----hcCCCCC--------
Confidence 11 2336789999999988889999999999999999998 7777653211 1111111 1111110
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 712 (760)
........+.+++.+|+..+|++|||+.|++++|
T Consensus 225 -~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 225 -KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0111234677899999999999999999999865
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.3e-23 Score=215.87 Aligned_cols=201 Identities=23% Similarity=0.365 Sum_probs=139.8
Q ss_pred cccccCCceeEEEEEecCC---cEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCC
Q 004345 501 NKLGQGGFGPVYKGKLQDG---QEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~---~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
+.||+|+||.||+|...++ ..+++|.+.... ....+.|.+|+.+++.++||||+++++.|......++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999985433 346677765432 344678999999999999999999999999999999999999999
Q ss_pred Chhhhh------------------------------------------------------ccccceeEecCCCcccccce
Q 004345 577 SLDSFL------------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 577 sL~~~L------------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
+|.++| +|||++..............
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 997653 38888754321111112223
Q ss_pred eeeeccccCcccccc-------CCCCccchhHHHHHHHHHHHhC-CCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 603 LVGTYGYMSPEYAME-------GRFSEKSDVFSFGVLLLEIVSG-RKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~-------~~~s~ksDVwSfGv~l~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
..++..|+|||++.. ..++.++|||||||++|||+++ ..|+...... .... ... .+......++.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~---~~~~---~~~-~~~~~~~~~~~ 233 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR---EVLN---HVI-KDQQVKLFKPQ 233 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH---HHHH---HHH-hhcccccCCCc
Confidence 567889999998753 2457899999999999999975 5566432211 1111 111 11222333333
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
+.... ..++.+++..|| .+|++||++++|+++|.
T Consensus 234 ~~~~~----~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 234 LELPY----SERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cCCCC----cHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 33222 235566778899 57999999999999884
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=215.99 Aligned_cols=205 Identities=23% Similarity=0.291 Sum_probs=149.8
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeC--CeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~lV~ 570 (760)
++|+..+.||.|++|.||++... +++.+|+|.+..... ....++.+|++++++++||||+++++++... ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46888899999999999999974 678999999875432 3456799999999999999999999998654 3689999
Q ss_pred eccCCCChhhhh------------------------------------------------------ccccceeEecCCCc
Q 004345 571 EYMPNKSLDSFL------------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 571 Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~~ 596 (760)
||+++++|.+++ +|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~- 159 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL- 159 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc-
Confidence 999999986542 3888876543211
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCccc--ccccHHHHHHHhccCCCcccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEE--FELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
.....++..|+|||.+....++.++||||||+++|||++|+.|+...... ....+..+.. ......+.+..
T Consensus 160 ---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 232 (287)
T cd06621 160 ---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV----NMPNPELKDEP 232 (287)
T ss_pred ---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh----cCCchhhccCC
Confidence 11345788999999999899999999999999999999999998644221 1111111111 11111111000
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.. .......+.+++.+||+.+|++|||+.||++
T Consensus 233 -~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 233 -GN--GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred -CC--CCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 00 0112356788999999999999999999988
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=228.85 Aligned_cols=216 Identities=19% Similarity=0.242 Sum_probs=149.2
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCC-----
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE----- 564 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~----- 564 (760)
..++|++.+.||+|+||.||++.. .+++.||||++... .......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 347899999999999999999986 46889999999643 2334567889999999999999999999986543
Q ss_pred -eeEEEEeccCCCChhhh-----------------------------------------------hccccceeEecCCCc
Q 004345 565 -ENMLIYEYMPNKSLDSF-----------------------------------------------LFDFGLARIFGGNQD 596 (760)
Q Consensus 565 -~~~lV~Ey~~~gsL~~~-----------------------------------------------L~DFGla~~~~~~~~ 596 (760)
..++||||++++.+... |+|||+++......
T Consensus 99 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 177 (359)
T cd07876 99 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF- 177 (359)
T ss_pred ceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCc-
Confidence 46999999986532211 24999987643221
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCccccccc------------HH----HHHHH
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELT------------LL----GYAWK 660 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~------------~~----~~~~~ 660 (760)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......... .. .....
T Consensus 178 --~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (359)
T cd07876 178 --MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRN 255 (359)
T ss_pred --cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 2233578999999999999999999999999999999999999986432211000 00 00000
Q ss_pred hccCC------Ccccccccccc---CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 661 LWNDN------NVIDLVDPLIS---ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 661 ~~~~~------~~~~~~d~~l~---~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..... ...+.....+. ..........+.+++.+||+.||++|||+.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 256 YVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000 00000000000 00011122457789999999999999999999884
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.6e-24 Score=221.33 Aligned_cols=189 Identities=28% Similarity=0.419 Sum_probs=137.6
Q ss_pred cccccCCceeEEEEEecC--------CcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 501 NKLGQGGFGPVYKGKLQD--------GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+.||+|+||.||+|.... ...||+|.+........++|.+|+.+++.++||||+++++++..+...++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 479999999999998532 335888888655445567899999999999999999999999999999999999
Q ss_pred cCCCChhhhhc-----------------------------------------------------------cccceeEecC
Q 004345 573 MPNKSLDSFLF-----------------------------------------------------------DFGLARIFGG 593 (760)
Q Consensus 573 ~~~gsL~~~L~-----------------------------------------------------------DFGla~~~~~ 593 (760)
+++|+|..+|. |||++....
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~- 159 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL- 159 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccC-
Confidence 99999987641 333332211
Q ss_pred CCcccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCC-CCCCCCcccccccHHHHHHHhccCCCccccc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGR-KNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (760)
......+++.|+|||++... .++.++|||||||++|||++|. .|+....... ... .... .
T Consensus 160 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~---~~~----~~~~-~----- 221 (258)
T cd05078 160 -----PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK---KLQ----FYED-R----- 221 (258)
T ss_pred -----CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH---HHH----HHHc-c-----
Confidence 11224578899999999864 5899999999999999999995 4443211110 000 0000 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
..+ +......+.+++.+||+.||++|||++++++.|+
T Consensus 222 -~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 -HQL----PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -ccC----CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 001 1112245778999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.6e-23 Score=214.60 Aligned_cols=201 Identities=24% Similarity=0.362 Sum_probs=139.8
Q ss_pred cccccCCceeEEEEEecC---CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCC
Q 004345 501 NKLGQGGFGPVYKGKLQD---GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~---~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
++||+|+||.||+|.... ...+|+|.+.... ......|.+|+.+++.++|+||+++++.+......++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 369999999999997543 3568888876432 233467899999999999999999999999999999999999999
Q ss_pred Chhhhh-------------------------------------------------------ccccceeEecCCCcccccc
Q 004345 577 SLDSFL-------------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 577 sL~~~L-------------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+|.++| +|||+++............
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD 160 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence 997653 3888876533222111122
Q ss_pred eeeeeccccCcccccc-------CCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 602 RLVGTYGYMSPEYAME-------GRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~-------~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
...+++.|+|||++.. ..++.++|||||||++|||++ |..|+...... ... ...... ......++
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~---~~~---~~~~~~-~~~~~~~~ 233 (269)
T cd05042 161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE---QVL---KQVVRE-QDIKLPKP 233 (269)
T ss_pred CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH---HHH---HHHhhc-cCccCCCC
Confidence 3345678999998753 357889999999999999999 77777533211 111 111111 11122222
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
.+.. .....+.+++..||. ||++|||+++|+++|.
T Consensus 234 ~~~~----~~~~~~~~~~~~~~~-dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 234 QLDL----KYSDRWYEVMQFCWL-DPETRPTAEEVHELLT 268 (269)
T ss_pred cccc----cCCHHHHHHHHHHhc-CcccccCHHHHHHHhc
Confidence 2221 122445567778884 9999999999999873
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-23 Score=221.08 Aligned_cols=209 Identities=24% Similarity=0.371 Sum_probs=153.3
Q ss_pred cCHHHHHHhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEe
Q 004345 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562 (760)
Q Consensus 485 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~ 562 (760)
+.++++..++++|++.+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++.++ +||||+++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 55567777899999999999999999999996 468899999986432 2346788999999999 89999999999875
Q ss_pred C-----CeeEEEEeccCCCChhhhh------------------------------------------------------c
Q 004345 563 R-----EENMLIYEYMPNKSLDSFL------------------------------------------------------F 583 (760)
Q Consensus 563 ~-----~~~~lV~Ey~~~gsL~~~L------------------------------------------------------~ 583 (760)
. ...++|+||+++++|.+++ .
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~ 170 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLV 170 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEe
Confidence 4 3579999999999987542 3
Q ss_pred cccceeEecCCCcccccceeeeeccccCccccccC-----CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG-----RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA 658 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~ 658 (760)
|||+++.+..... ......|+..|+|||.+... .++.++|||||||++|||++|+.|+....... .+
T Consensus 171 dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~--~~---- 242 (291)
T cd06639 171 DFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK--TL---- 242 (291)
T ss_pred ecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH--HH----
Confidence 8888775432211 11234678899999998643 36899999999999999999999986332111 11
Q ss_pred HHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 659 WKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 659 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
... .......+.+ .......+.+++.+||+.+|++||++.++++
T Consensus 243 ~~~-~~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 243 FKI-PRNPPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHH-hcCCCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111 1111111111 1112245788999999999999999999976
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.7e-23 Score=217.19 Aligned_cols=198 Identities=23% Similarity=0.321 Sum_probs=146.3
Q ss_pred cccccccccCCceeEEEEEe-cCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 497 FQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
|+..+.||+|+||+||++.. .+++.+|+|.+.... ......+.+|++++.+++|+||+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 66678999999999999986 468899999986432 22345678999999999999999999999999999999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+++++|..++ +|||++....... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~---~~ 158 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE---SI 158 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC---cc
Confidence 9999986542 3899887653221 11
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....|+..|+|||.+....++.++|||||||++|||++|+.||......... ........... . ...
T Consensus 159 ~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~---~~~~~~~~~~~--~----~~~---- 225 (285)
T cd05632 159 RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR---EEVDRRVLETE--E----VYS---- 225 (285)
T ss_pred cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHhhhccc--c----ccC----
Confidence 2346899999999999889999999999999999999999998643221110 11111111110 0 001
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCC-----HHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPN-----MPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 710 (760)
......+.+++..|++.||++||+ +.++++
T Consensus 226 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 226 AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 111234677888999999999999 555555
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.1e-23 Score=216.22 Aligned_cols=198 Identities=24% Similarity=0.405 Sum_probs=149.7
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEeccc-CccchHhHHHHHHHHhcCC---CCccceeeeEEEeCCeeEEEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQ---HRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~---H~nIv~l~g~~~~~~~~~lV~ 570 (760)
.|++.+.||+|+||.||+|.. .+++.+|+|.++.. .....+++.+|+.++++++ |||++++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477789999999999999995 57889999998754 3344567899999999986 999999999999999999999
Q ss_pred eccCCCChhhhh-------------------------------------------------ccccceeEecCCCcccccc
Q 004345 571 EYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 571 Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
||+++++|.+++ +|||++..+..... ...
T Consensus 82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~ 159 (277)
T cd06917 82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS--KRS 159 (277)
T ss_pred ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc--ccc
Confidence 999999987653 38998887643321 122
Q ss_pred eeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...|+..|+|||.+..+ .++.++|||||||++|||++|+.|+....... ... ..... ..+.+...
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~------~~~-~~~~~-----~~~~~~~~-- 225 (277)
T cd06917 160 TFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR------AMM-LIPKS-----KPPRLEDN-- 225 (277)
T ss_pred cccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh------hhh-ccccC-----CCCCCCcc--
Confidence 34688899999998754 47899999999999999999999986322110 000 00000 01111111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.....+.+++.+||+.||++||++.++++
T Consensus 226 -~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 226 -GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred -cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 12345778889999999999999999987
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-23 Score=217.82 Aligned_cols=203 Identities=30% Similarity=0.391 Sum_probs=148.7
Q ss_pred cccccccccccCCceeEEEEEec------CCcEEEEEEecccCcc-chHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKASGQ-GQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
++|++.+.||+|+||.||+|+.+ +.+.|++|.+...... ..++|.+|++++++++|+||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888899999999999999853 3467999988754433 4578999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhh-----------------------------------------------------------ccccce
Q 004345 568 LIYEYMPNKSLDSFL-----------------------------------------------------------FDFGLA 588 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L-----------------------------------------------------------~DFGla 588 (760)
+||||+++|+|.++| .|||++
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~ 164 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLS 164 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccc
Confidence 999999999998653 155555
Q ss_pred eEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCc
Q 004345 589 RIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (760)
+...... ........++..|+|||.+....++.++||||||++++||++ |..|+...... .. .. ....+..
T Consensus 165 ~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~---~~---~~-~~~~~~~ 236 (275)
T cd05046 165 KDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE---EV---LN-RLQAGKL 236 (275)
T ss_pred cccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH---HH---HH-HHHcCCc
Confidence 4321111 111223356778999999988889999999999999999999 77777432211 11 11 1111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
... ........+.+++.+||+.+|++||++.+++++|.
T Consensus 237 ~~~--------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 237 ELP--------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCC--------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 100 01112246778999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-23 Score=227.35 Aligned_cols=191 Identities=21% Similarity=0.257 Sum_probs=140.4
Q ss_pred cccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHH-HHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVM-VISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~-~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
+.||+|+||.||+++. .+++.+|+|++.+. ......++.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999985 46899999998653 2233455666665 46789999999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..++ +|||+++...... .......|
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~g 158 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS--DTTTTFCG 158 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC--CCcccccC
Confidence 9987652 4999987532211 12234578
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
|+.|||||.+....++.++|||||||++|||++|+.||...... ....... .... .+.. ....
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~------~~~~~~~-~~~~------~~~~----~~~~ 221 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA------EMYDNIL-HKPL------VLRP----GASL 221 (325)
T ss_pred ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH------HHHHHHH-cCCc------cCCC----CCCH
Confidence 99999999999999999999999999999999999998632211 1111111 1110 0111 1224
Q ss_pred HHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 686 RCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+.+++.+|++.+|.+||++.+.++
T Consensus 222 ~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 222 TAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred HHHHHHHHHhccCHHhcCCCCCCHH
Confidence 5667888999999999999864443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-23 Score=217.84 Aligned_cols=203 Identities=25% Similarity=0.377 Sum_probs=148.2
Q ss_pred cccccccccCCceeEEEEEec----CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCC------
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ----DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE------ 564 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~------ 564 (760)
|++.++||+|+||.||+|... +++.||||++... .....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566789999999999999853 4688999998653 2334567999999999999999999999986543
Q ss_pred eeEEEEeccCCCChhhhh--------------------------------------------------------ccccce
Q 004345 565 ENMLIYEYMPNKSLDSFL--------------------------------------------------------FDFGLA 588 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L--------------------------------------------------------~DFGla 588 (760)
..++++||+++|+|..++ .|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 247899999999986432 388888
Q ss_pred eEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCc
Q 004345 589 RIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (760)
+...............++..|++||.+....++.++||||||+++|||++ |+.|+..... ..+..+.. ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---~~~~~~~~----~~~~ 233 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---SEIYNYLI----KGNR 233 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---HHHHHHHH----cCCc
Confidence 76543222212222345678999999998899999999999999999999 7888753221 11111111 1110
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
.. ........+.+++.+|++.+|++||++.++++.|+++
T Consensus 234 ~~---------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 LK---------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0111235788899999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-23 Score=214.89 Aligned_cols=204 Identities=24% Similarity=0.407 Sum_probs=151.7
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.+.||.|+||.||+|.. .++..+|+|++.... ....+.+.+|+++++.++|+||+++++.+..++..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 4688899999999999999995 467899999986432 23567899999999999999999999999999999999999
Q ss_pred cCCCChhhhh-----------------------------------------------------ccccceeEecCCCccc-
Q 004345 573 MPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQA- 598 (760)
Q Consensus 573 ~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~- 598 (760)
+++++|.+++ .|||++..+.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 9999876653 2788776554322221
Q ss_pred -ccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 599 -ATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 599 -~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
......|+..|+|||.+... .++.++|||||||++|||++|+.|+....... .. ....... .+.+.
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~----~~~~~~~------~~~~~ 228 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK--VL----MLTLQND------PPSLE 228 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--hH----HHHhcCC------CCCcC
Confidence 22334688999999998877 78999999999999999999999986332211 11 1111110 01111
Q ss_pred CCC-CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 677 ESG-FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 677 ~~~-~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
... .......+.+++.+||+.||++||++.+|++
T Consensus 229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 229 TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 111 0122356778999999999999999999976
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.6e-23 Score=215.28 Aligned_cols=200 Identities=25% Similarity=0.408 Sum_probs=142.8
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccC-----ccchHhHHHHHHHHhcCCCCccceeeeEEEeC--Cee
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS-----GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EEN 566 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~ 566 (760)
.+|+..+.||+|+||.||++.. .+++.||+|++.... .+..+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4688889999999999999986 468899999886432 12345688999999999999999999998753 567
Q ss_pred EEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCc
Q 004345 567 MLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~ 596 (760)
++++||+++++|.++| .|||+++.+.....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 8999999999987653 38888875532111
Q ss_pred -ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 -QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 -~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
........++..|+|||.+....++.++|||||||++|||++|+.||...... .......... ..+.+
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~------~~~~~~~~~~-----~~~~~ 230 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM------AAIFKIATQP-----TNPQL 230 (266)
T ss_pred cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH------HHHHHHhcCC-----CCCCC
Confidence 11112345788999999999888999999999999999999999998532111 1111110000 01111
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+......+..+ +.||..+|++||+|+||++
T Consensus 231 ----~~~~~~~~~~l-i~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 231 ----PSHISEHARDF-LGCIFVEARHRPSAEELLR 260 (266)
T ss_pred ----chhcCHHHHHH-HHHhcCChhhCcCHHHHhc
Confidence 11111223333 4788899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.7e-23 Score=220.56 Aligned_cols=190 Identities=23% Similarity=0.283 Sum_probs=141.4
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
++||+|+||.||+|+.. +++.||+|.++... ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999965 67899999997532 23455677888888754 899999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..++ +|||+++...... .......|
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g 158 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--NRASTFCG 158 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC--CceeccCC
Confidence 9997552 4999987532111 12234678
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
|+.|+|||++....++.++|||||||++|||++|+.||...... .+.. ..... .+.+.. ....
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~---~~~~----~~~~~------~~~~~~----~~~~ 221 (316)
T cd05620 159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED---ELFE----SIRVD------TPHYPR----WITK 221 (316)
T ss_pred CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHHH----HHHhC------CCCCCC----CCCH
Confidence 99999999999999999999999999999999999998633221 1111 11110 011111 1123
Q ss_pred HHHHHHHhcccCCcCCCCCHH-HHH
Q 004345 686 RCVNVGLLCVQEFVKDRPNMP-TVV 709 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~~-ev~ 709 (760)
.+.+++.+|++.||++||++. ++.
T Consensus 222 ~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 222 ESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHH
Confidence 566788899999999999985 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-23 Score=216.47 Aligned_cols=202 Identities=27% Similarity=0.490 Sum_probs=149.4
Q ss_pred cccccccccCCceeEEEEEec-CCcEEEEEEecccCccch--HhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQ--EEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~--~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
|++.+.||+|+||+||+++.. +++.+|+|++........ ....+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 677899999999999999965 566899999976543222 23466999999999999999999999999999999999
Q ss_pred CCCChhhhh--------------------------------------------------ccccceeEecCCCccccccee
Q 004345 574 PNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 574 ~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
++++|.++| +|||.+.... .........
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~~~~~~~~ 158 (260)
T PF00069_consen 81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS--ENNENFNPF 158 (260)
T ss_dssp TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST--STTSEBSSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccc
Confidence 999998763 3999987641 112233346
Q ss_pred eeeccccCccccc-cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHH
Q 004345 604 VGTYGYMSPEYAM-EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682 (760)
Q Consensus 604 ~gt~~y~aPE~~~-~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 682 (760)
.++..|+|||++. ...++.++||||+|++++||++|+.|+............. +.... .. .... .....
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~---~~~~~-~~---~~~~---~~~~~ 228 (260)
T PF00069_consen 159 VGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIE---KILKR-PL---PSSS---QQSRE 228 (260)
T ss_dssp SSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHH---HHHHT-HH---HHHT---TSHTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccchhhhhhhh---hcccc-cc---cccc---cccch
Confidence 7889999999998 7889999999999999999999999987441111111110 00000 00 0000 00000
Q ss_pred HHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 683 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+.+++..||+.||++||++.++++
T Consensus 229 ~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 229 KSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp SHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1267888999999999999999999976
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-23 Score=216.38 Aligned_cols=202 Identities=22% Similarity=0.407 Sum_probs=148.4
Q ss_pred HhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEeCC-----
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVERE----- 564 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~----- 564 (760)
.++++|++.+.||+|++|.||+|... +++.+++|++.... ...+.|.+|+.+++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 45789999999999999999999974 57889999986543 3456799999999999 7999999999997654
Q ss_pred -eeEEEEeccCCCChhhhh------------------------------------------------------cccccee
Q 004345 565 -ENMLIYEYMPNKSLDSFL------------------------------------------------------FDFGLAR 589 (760)
Q Consensus 565 -~~~lV~Ey~~~gsL~~~L------------------------------------------------------~DFGla~ 589 (760)
..++||||+++++|.+++ +|||++.
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~ 161 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSA 161 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccce
Confidence 489999999998876542 3888877
Q ss_pred EecCCCcccccceeeeeccccCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC
Q 004345 590 IFGGNQDQAATKRLVGTYGYMSPEYAME-----GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND 664 (760)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 664 (760)
...... .......++..|+|||.+.. ..++.++|||||||+++||++|+.|+....... . .... ..
T Consensus 162 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~---~~~~-~~ 232 (275)
T cd06608 162 QLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR---A---LFKI-PR 232 (275)
T ss_pred ecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH---H---HHHh-hc
Confidence 543222 11223568889999998753 347889999999999999999999985322110 0 0011 01
Q ss_pred CCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 665 NNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 665 ~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
... +.+. ........+.+++.+||+.||++|||+.+|++
T Consensus 233 ~~~-----~~~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 233 NPP-----PTLK--SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred cCC-----CCCC--chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 110 1111 11112356778999999999999999999986
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.8e-23 Score=213.69 Aligned_cols=197 Identities=19% Similarity=0.289 Sum_probs=148.7
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEe-CCeeEEEEe
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVE-REENMLIYE 571 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~-~~~~~lV~E 571 (760)
+|++.+.||+|++|.||++... +++.||+|++.... ....+.+.+|++++++++|+|++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788999999999999999964 57889999986432 2345678999999999999999999998764 446789999
Q ss_pred ccCCCChhhhh----------------------------------------------------ccccceeEecCCCcccc
Q 004345 572 YMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 572 y~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|+++++|.+++ +|||+++....... .
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--~ 158 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD--M 158 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCC--c
Confidence 99999987652 38898886643221 2
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....+++.|+|||.+....++.++||||||++++||++|+.|+..... ........ .+.... .
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~------~~~~~~~~-~~~~~~---------~ 222 (257)
T cd08223 159 ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM------NSLVYRII-EGKLPP---------M 222 (257)
T ss_pred cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHH-hcCCCC---------C
Confidence 2235688999999999999999999999999999999999999863221 11111111 111100 1
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.......+.+++.+|++.+|++||++.++++
T Consensus 223 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 223 PKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1122356778999999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-23 Score=227.44 Aligned_cols=215 Identities=19% Similarity=0.242 Sum_probs=149.0
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC-----
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE----- 564 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~----- 564 (760)
..++|++.+.||+|+||.||++... .++.||||++.... ....+.+.+|+.+++.++||||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999854 67899999997542 233467889999999999999999999986543
Q ss_pred -eeEEEEeccCCCChhhh------------------------------------------------hccccceeEecCCC
Q 004345 565 -ENMLIYEYMPNKSLDSF------------------------------------------------LFDFGLARIFGGNQ 595 (760)
Q Consensus 565 -~~~lV~Ey~~~gsL~~~------------------------------------------------L~DFGla~~~~~~~ 595 (760)
..++||||++++ |... |+|||+++......
T Consensus 95 ~~~~lv~e~~~~~-l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 173 (355)
T cd07874 95 QDVYLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 173 (355)
T ss_pred ceeEEEhhhhccc-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCcc
Confidence 469999999764 4322 24999998653221
Q ss_pred cccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccH-HH---------------HHH
Q 004345 596 DQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTL-LG---------------YAW 659 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~-~~---------------~~~ 659 (760)
......||..|+|||++.+..++.++|||||||++|||++|+.||........... .. ...
T Consensus 174 ---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (355)
T cd07874 174 ---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_pred ---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHH
Confidence 22335789999999999998999999999999999999999999864321110000 00 000
Q ss_pred HhccC-CCccccc------cccc--cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 660 KLWND-NNVIDLV------DPLI--SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 660 ~~~~~-~~~~~~~------d~~l--~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..... ....... +... ...........+.+++.+|++.||++|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000 0000000 0000 000111123467789999999999999999999984
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.7e-23 Score=218.10 Aligned_cols=197 Identities=21% Similarity=0.313 Sum_probs=148.7
Q ss_pred cccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCC
Q 004345 499 LANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKS 577 (760)
Q Consensus 499 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 577 (760)
....||+|+||.||++... +++.||+|.+........+.+.+|+.++.+++||||+++++++..++..++|+||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 3468999999999999864 688999999976555556789999999999999999999999999999999999999999
Q ss_pred hhhhh-------------------------------------------------ccccceeEecCCCcccccceeeeecc
Q 004345 578 LDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTYG 608 (760)
Q Consensus 578 L~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (760)
|..++ +|||+++.+.... .......++..
T Consensus 105 L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~ 182 (297)
T cd06659 105 LTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRKSLVGTPY 182 (297)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc--ccccceecCcc
Confidence 87652 3888876543222 11223568899
Q ss_pred ccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHH
Q 004345 609 YMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCV 688 (760)
Q Consensus 609 y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 688 (760)
|+|||.+....++.++|||||||+++||++|+.|+...... .... ......... ... .......+.
T Consensus 183 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---~~~~----~~~~~~~~~-----~~~--~~~~~~~l~ 248 (297)
T cd06659 183 WMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV---QAMK----RLRDSPPPK-----LKN--AHKISPVLR 248 (297)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HHhccCCCC-----ccc--cCCCCHHHH
Confidence 99999999888999999999999999999999998632211 1111 111110000 000 001123467
Q ss_pred HHHHhcccCCcCCCCCHHHHHHH
Q 004345 689 NVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 689 ~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
+++.+|++.+|++||++.++++.
T Consensus 249 ~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 249 DFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHhcCCcccCcCHHHHhhC
Confidence 78889999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-23 Score=227.45 Aligned_cols=192 Identities=22% Similarity=0.246 Sum_probs=144.9
Q ss_pred cccccCCceeEEEEEe-cCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCC
Q 004345 501 NKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
+.||+|+||.||++.. .+++.||+|.+.+.. ......+.+|++++.+++||||+++++++...+..+|||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4689999999999985 478899999997532 234457889999999999999999999999999999999999999
Q ss_pred Chhhhh---------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 577 SLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 577 sL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
+|..++ +|||+++...... .......|
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~g 158 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--ATMKTFCG 158 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--cccccccC
Confidence 987652 3999987542221 11223569
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
|+.|||||++....++.++|||||||++|||++|+.||.....+. ... ... ... ..+... ...
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~---~~~---~i~-~~~------~~~p~~----~~~ 221 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFE---LIL-MEE------IRFPRT----LSP 221 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHH---HHH---HHh-cCC------CCCCCC----CCH
Confidence 999999999999999999999999999999999999985332211 110 000 000 001111 123
Q ss_pred HHHHHHHhcccCCcCCCC-----CHHHHHHH
Q 004345 686 RCVNVGLLCVQEFVKDRP-----NMPTVVSM 711 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RP-----t~~ev~~~ 711 (760)
.+.+++.+|++.||++|+ ++.++++.
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 222 EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 567788899999999996 89998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-23 Score=212.62 Aligned_cols=217 Identities=19% Similarity=0.311 Sum_probs=154.0
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEe-----CCe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE-----REE 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~-----~~~ 565 (760)
...|...+.||+|+||.|..+.. .+++.||||++.+. .....++-.+|+++|+.++|+||+.+++++.. -+.
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 34566679999999999999995 47899999999743 34456788999999999999999999999876 346
Q ss_pred eEEEEeccCCCChhhh--------------------------------------------------hccccceeEecCCC
Q 004345 566 NMLIYEYMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQ 595 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~ 595 (760)
.|+|+|+|+ -+|... |+|||||+......
T Consensus 101 vYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~ 179 (359)
T KOG0660|consen 101 VYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF 179 (359)
T ss_pred eEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccC
Confidence 799999993 344332 25999999875442
Q ss_pred cccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHh--------ccCCC
Q 004345 596 DQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL--------WNDNN 666 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~--------~~~~~ 666 (760)
.....+..+-|..|.|||.+.. ..|+.+.||||.||++.||++|++-|...+.-++..++...... .....
T Consensus 180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ 259 (359)
T KOG0660|consen 180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEK 259 (359)
T ss_pred cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHH
Confidence 2233356788999999999864 56999999999999999999999988755444333333221111 11111
Q ss_pred ccccccc--cccCCC----CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 667 VIDLVDP--LISESG----FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 667 ~~~~~d~--~l~~~~----~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
....+.. ...... .+..-...+++..++|..||.+|+|++|.++.
T Consensus 260 ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 260 ARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1111111 000000 01122567888889999999999999999873
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.4e-23 Score=226.58 Aligned_cols=215 Identities=18% Similarity=0.250 Sum_probs=148.8
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeC------
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER------ 563 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~------ 563 (760)
..++|++.+.||+|+||.||++... .++.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578999999999999999999854 6789999999753 233456788999999999999999999987643
Q ss_pred CeeEEEEeccCCCChhhh------------------------------------------------hccccceeEecCCC
Q 004345 564 EENMLIYEYMPNKSLDSF------------------------------------------------LFDFGLARIFGGNQ 595 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~------------------------------------------------L~DFGla~~~~~~~ 595 (760)
...++||||++++ |..+ |+|||+++......
T Consensus 102 ~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 180 (364)
T cd07875 102 QDVYIVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 180 (364)
T ss_pred CeEEEEEeCCCCC-HHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC
Confidence 3579999999764 4332 24999998653221
Q ss_pred cccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHH---------H-------HH
Q 004345 596 DQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLG---------Y-------AW 659 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~---------~-------~~ 659 (760)
......+|..|+|||++.+..++.++|||||||++|||++|+.||...........+. . ..
T Consensus 181 ---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (364)
T cd07875 181 ---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 257 (364)
T ss_pred ---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHH
Confidence 1223568999999999999999999999999999999999999986432211100000 0 00
Q ss_pred HhccCCC------ccccccccc---cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 660 KLWNDNN------VIDLVDPLI---SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 660 ~~~~~~~------~~~~~d~~l---~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
....... ..+.....+ ...........+.+++.+|++.||++|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 000000000 000011122467789999999999999999999884
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=9e-23 Score=213.64 Aligned_cols=203 Identities=23% Similarity=0.387 Sum_probs=150.4
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc------cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG------QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~------~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
+|+..+.||+|++|.||++.. .+++.||+|.+..... ...+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477789999999999999985 5788999999864321 134678999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
|+||+++++|.++| +|||++..+......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 160 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG 160 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence 99999999997763 377777655322111
Q ss_pred --cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 598 --AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 598 --~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
.......++..|+|||.+....++.++||||+|++++||++|+.|+...... ............ ..
T Consensus 161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~---------~~ 228 (268)
T cd06630 161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS---NHLALIFKIASA---------TT 228 (268)
T ss_pred CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc---chHHHHHHHhcc---------CC
Confidence 1112346788999999998888999999999999999999999998532211 111111111000 00
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+......+.+++.+|++.+|.+||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 229 APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 11122223356778999999999999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=227.83 Aligned_cols=144 Identities=21% Similarity=0.257 Sum_probs=118.9
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
..+|.+.+.||+|+||.||++... .++.||||... ...+.+|+++|++|+|+|||++++++..++..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457999999999999999999965 57889999632 23467899999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+. ++|..+| +|||+++.+..........
T Consensus 242 ~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 242 YR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred cC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 95 5665542 4999998764332222223
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTS 644 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~ 644 (760)
...||+.|||||++.+..++.++|||||||+||||++|..++.
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 4579999999999999999999999999999999999887653
|
|
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.89 E-value=7e-23 Score=216.59 Aligned_cols=210 Identities=24% Similarity=0.333 Sum_probs=144.6
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|++.+.||+|++|.||+|+.. +++.||||+++... ....+.+.+|+.++.+++||||+++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999964 68899999986432 22346788999999999999999999999999999999999
Q ss_pred cCCCChhhh-----------------------------------------------------hccccceeEecCCCcccc
Q 004345 573 MPNKSLDSF-----------------------------------------------------LFDFGLARIFGGNQDQAA 599 (760)
Q Consensus 573 ~~~gsL~~~-----------------------------------------------------L~DFGla~~~~~~~~~~~ 599 (760)
++ ++|.++ |+|||+++...... ..
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--~~ 157 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV--RV 157 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc--cc
Confidence 97 455443 23899887653221 11
Q ss_pred cceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHH-------hccCC----Cc
Q 004345 600 TKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWK-------LWNDN----NV 667 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~-------~~~~~----~~ 667 (760)
.....+++.|+|||.+.+. .++.++|||||||+++||+||+.|+........ ....... .+... ..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ--LFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCChhhhhcchhhHHH
Confidence 2234568899999988654 578999999999999999999998863322110 0000000 00000 00
Q ss_pred cccccccccC---CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 668 IDLVDPLISE---SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 668 ~~~~d~~l~~---~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+..... ........++.+++.+||+.||++|||+.+|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000 000001245678999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-23 Score=217.25 Aligned_cols=199 Identities=22% Similarity=0.363 Sum_probs=147.4
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.+.||+|+||.||++... +++.||+|.+... .....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 35788899999999999999965 7899999988643 223356799999999999999999999999999999999999
Q ss_pred cCCCChhhhh------------------------------------------------------ccccceeEecCCCccc
Q 004345 573 MPNKSLDSFL------------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 573 ~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
+++++|..++ +|||++..+...
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS---- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC----
Confidence 9999887542 377777654221
Q ss_pred ccceeeeeccccCccccccC------CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 599 ATKRLVGTYGYMSPEYAMEG------RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~------~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
......++..|+|||.+... .++.++|||||||++|||++|+.||...... ......... ..+..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~~~~~-~~~~~----- 227 (286)
T cd06622 157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA---NIFAQLSAI-VDGDP----- 227 (286)
T ss_pred ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh---hHHHHHHHH-hhcCC-----
Confidence 12234578899999998544 3588999999999999999999998532211 111111100 01110
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+ ..+......+.+++.+||+.+|++||++.+++.
T Consensus 228 ~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 228 P----TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred C----CCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 1 111223355678889999999999999999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.4e-23 Score=214.47 Aligned_cols=195 Identities=29% Similarity=0.435 Sum_probs=146.7
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
++|++.+.||+|+||.||++.. +++.||+|.++.. ...+.+.+|+.++++++||||+++++++..+ ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4688889999999999999975 5788999998643 2346799999999999999999999998764 5799999999
Q ss_pred CCChhhhh----------------------------------------------------ccccceeEecCCCcccccce
Q 004345 575 NKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 575 ~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
+++|.+++ +|||+++...... ..
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~-----~~ 156 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV-----DN 156 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccC-----CC
Confidence 99997653 3888877542211 11
Q ss_pred eeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 603 LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
...+..|+|||.+....++.++||||||+++|||++ |+.|+...... ... .....+...+ ...
T Consensus 157 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~----~~~~~~~~~~---------~~~ 220 (254)
T cd05083 157 SKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK---EVK----ECVEKGYRME---------PPE 220 (254)
T ss_pred CCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH---HHH----HHHhCCCCCC---------CCC
Confidence 234568999999998899999999999999999998 88887533221 111 1111111100 011
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
.....+.+++.+||+.+|++||++++|++.|++
T Consensus 221 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 221 GCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 123456789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-24 Score=228.86 Aligned_cols=200 Identities=20% Similarity=0.371 Sum_probs=152.6
Q ss_pred cccccccccccCCceeEEEEEecC-CcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
+.|.++..||.|+||.|||+..++ +...|.|++...+....+.|+-|++||+..+||+||+|++.|..++.++|+.|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 446778899999999999999653 4556788888778888899999999999999999999999999999999999999
Q ss_pred CCCChhhh---------------------------------------------------hccccceeEecCCCcccccce
Q 004345 574 PNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 574 ~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~~~~ 602 (760)
+||-++.. |+|||.+.... ........
T Consensus 112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~qkRDs 189 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK--STRQKRDS 189 (1187)
T ss_pred CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccch--hHHhhhcc
Confidence 99988765 24999876432 22234456
Q ss_pred eeeeccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 603 LVGTYGYMSPEYAM-----EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 603 ~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
..||++|||||+.. ..+|+.++||||||++|.||..+.+|...... .....+. .... .|.+..
T Consensus 190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp------MRVllKi-aKSe-----PPTLlq 257 (1187)
T KOG0579|consen 190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKI-AKSE-----PPTLLQ 257 (1187)
T ss_pred ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch------HHHHHHH-hhcC-----CCcccC
Confidence 89999999999874 56899999999999999999999998642211 1111111 0111 112211
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+..-...+-++.-+||..||..||++.++++
T Consensus 258 --PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 258 --PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred --cchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 1223345677888999999999999999886
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-23 Score=213.38 Aligned_cols=212 Identities=25% Similarity=0.306 Sum_probs=159.2
Q ss_pred HHHHHhccccccccccccCCceeEEEEEec------CCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEE
Q 004345 488 EELANATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560 (760)
Q Consensus 488 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~ 560 (760)
.++.....+++....+-+|.||.||.|.+. +.+.|-||.++.. +.-....|+.|...+..+.|||+..+.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 455566778899999999999999999654 3456788888644 334456799999999999999999999999
Q ss_pred EeC-CeeEEEEeccCCCChhhhh---------------------------------------------------------
Q 004345 561 VER-EENMLIYEYMPNKSLDSFL--------------------------------------------------------- 582 (760)
Q Consensus 561 ~~~-~~~~lV~Ey~~~gsL~~~L--------------------------------------------------------- 582 (760)
.+. ..++++|.++.-|+|..||
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVk 436 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVK 436 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEE
Confidence 865 4678999999999999885
Q ss_pred -ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHH
Q 004345 583 -FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWK 660 (760)
Q Consensus 583 -~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 660 (760)
+|=.|+|.+.+............+..||+||.+.+..|+.++|||||||+||||+| |+.|+-..++.+. ..
T Consensus 437 ltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm-------~~ 509 (563)
T KOG1024|consen 437 LTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM-------EH 509 (563)
T ss_pred eccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH-------HH
Confidence 25555655544433333333345779999999999999999999999999999998 8888753333211 11
Q ss_pred hccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 661 LWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 661 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
++.+|. ++. .+..+..++..+|..||...|++||+++|++.-|.+.
T Consensus 510 ylkdGy-------Rla--QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 510 YLKDGY-------RLA--QPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred HHhccc-------eec--CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 222221 111 1223456788999999999999999999999998764
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-22 Score=218.91 Aligned_cols=150 Identities=27% Similarity=0.394 Sum_probs=124.0
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+++.. +++.||+|++.+. .....+.|.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46889999999999999999954 6889999999742 2234456889999999999999999999999999999999
Q ss_pred eccCCCChhhhh---------------------------------------------------ccccceeEecCCCcccc
Q 004345 571 EYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 571 Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
||+++|+|.++| +|||+++.+...... .
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~ 159 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV-Q 159 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc-c
Confidence 999999997763 399998765432221 1
Q ss_pred cceeeeeccccCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 600 TKRLVGTYGYMSPEYAME-----GRFSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
.....||+.|||||++.. ..++.++|||||||++|||++|+.||..
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 223468999999999863 4578899999999999999999999853
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-23 Score=225.02 Aligned_cols=187 Identities=22% Similarity=0.272 Sum_probs=138.6
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHH-HHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVM-VISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~-~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
+.||+|+||.||+|+.. +++.||||++.+.. ....+++.+|.. +++.++||||+++++.+...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999964 68999999997532 223345666655 56789999999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..++ +|||+++...... .......|
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g 158 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--KTTSTFCG 158 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--CccccccC
Confidence 9997652 4999987532211 12234578
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
|+.|||||++.+..++.++|||||||++|||++|+.||...... ....... .+.. .+... ...
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~------~~~~~i~-~~~~------~~~~~----~~~ 221 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA------EMYDNIL-NKPL------RLKPN----ISV 221 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH------HHHHHHH-cCCC------CCCCC----CCH
Confidence 99999999999999999999999999999999999998632211 1111111 1100 01111 134
Q ss_pred HHHHHHHhcccCCcCCCCCHH
Q 004345 686 RCVNVGLLCVQEFVKDRPNMP 706 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~~ 706 (760)
.+.+++.+|++.||.+||++.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 222 SARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHHhhcCHHhCCCCC
Confidence 577888899999999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-24 Score=227.29 Aligned_cols=194 Identities=26% Similarity=0.446 Sum_probs=145.8
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCcc---chHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQ---GQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
..|+.++.||.|+||.||-++. .+.+.||||+++-...+ ...++++|+..|.+++|||+|.+.||+..+...||||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence 3466678999999999999994 57889999999854333 3457899999999999999999999999999999999
Q ss_pred eccCCCChhhh---------------------------------------------------hccccceeEecCCCcccc
Q 004345 571 EYMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAA 599 (760)
Q Consensus 571 Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~ 599 (760)
|||-| |-.++ |+|||.|.+.. .
T Consensus 106 EYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~------P 178 (948)
T KOG0577|consen 106 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA------P 178 (948)
T ss_pred HHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC------c
Confidence 99954 33332 24888877653 2
Q ss_pred cceeeeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 600 TKRLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.+..+||+.|||||+|. .+.|+-|+||||+||+..||.-.++|....+. ++-+-++. .++ .|.+.
T Consensus 179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA---MSALYHIA----QNe-----sPtLq 246 (948)
T KOG0577|consen 179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYHIA----QNE-----SPTLQ 246 (948)
T ss_pred hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH---HHHHHHHH----hcC-----CCCCC
Confidence 34579999999999986 67899999999999999999999998752211 11111111 110 12222
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. .+-...+.+++-.|++.-|.+|||..++++
T Consensus 247 s---~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 247 S---NEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred C---chhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 2 223455667777999999999999987765
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-22 Score=208.94 Aligned_cols=203 Identities=25% Similarity=0.374 Sum_probs=154.4
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.+.||+|++|.||+++.. +++.|+||++..... ...+.+.+|+..+.+++|+||+++++++...+..++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 46888899999999999999976 589999999876543 4567899999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+++++|.+++ +|||+++........ ..
T Consensus 81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~--~~ 158 (264)
T cd06623 81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ--CN 158 (264)
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc--cc
Confidence 9999998763 277777655322211 12
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
...++..|+|||.+....++.++||||||+++|||++|+.|+............... . .... +.+...
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~---~-~~~~-----~~~~~~--- 226 (264)
T cd06623 159 TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI---C-DGPP-----PSLPAE--- 226 (264)
T ss_pred ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHH---h-cCCC-----CCCCcc---
Confidence 356788999999999889999999999999999999999998644321111111111 1 1110 111111
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.....+.+++.+|++.+|++||++.++++.
T Consensus 227 ~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 227 EFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 023567788899999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.8e-23 Score=219.13 Aligned_cols=197 Identities=21% Similarity=0.320 Sum_probs=148.5
Q ss_pred cccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCC
Q 004345 499 LANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKS 577 (760)
Q Consensus 499 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 577 (760)
....||+|+||.||++... +++.||||.+........+.+.+|+.++++++|+||+++++.+..++..++||||+++++
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 3477999999999999864 688999999876555556779999999999999999999999999999999999999999
Q ss_pred hhhhh-------------------------------------------------ccccceeEecCCCcccccceeeeecc
Q 004345 578 LDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTYG 608 (760)
Q Consensus 578 L~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (760)
|..++ .|||++....... .......|+..
T Consensus 106 L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~ 183 (292)
T cd06658 106 LTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--PKRKSLVGTPY 183 (292)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc--ccCceeecCcc
Confidence 87653 3888876543222 12233568899
Q ss_pred ccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHH
Q 004345 609 YMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCV 688 (760)
Q Consensus 609 y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 688 (760)
|+|||.+....++.++||||||+++|||++|+.|+...... ....... ..+.+.+... ......+.
T Consensus 184 y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~---~~~~~~~---------~~~~~~~~~~--~~~~~~~~ 249 (292)
T cd06658 184 WMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL---QAMRRIR---------DNLPPRVKDS--HKVSSVLR 249 (292)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHH---------hcCCCccccc--cccCHHHH
Confidence 99999998888999999999999999999999998532211 1110000 0111111110 01123466
Q ss_pred HHHHhcccCCcCCCCCHHHHHHH
Q 004345 689 NVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 689 ~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
+++.+|++.||.+|||+.++++.
T Consensus 250 ~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 250 GFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHccCChhHCcCHHHHhhC
Confidence 78889999999999999999974
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-23 Score=242.60 Aligned_cols=200 Identities=21% Similarity=0.319 Sum_probs=144.9
Q ss_pred HhccccccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeC--Cee
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EEN 566 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~ 566 (760)
...++|++.++||+|+||.||+++.. .++.||+|.+... .......|..|+.++++|+|||||++++++... ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34578999999999999999999964 5678999988643 233456799999999999999999999988653 568
Q ss_pred EEEEeccCCCChhhhh----------------------------------------------------------------
Q 004345 567 MLIYEYMPNKSLDSFL---------------------------------------------------------------- 582 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L---------------------------------------------------------------- 582 (760)
+|||||+++|+|..+|
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 9999999999986543
Q ss_pred --------------ccccceeEecCCCcccccceeeeeccccCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 004345 583 --------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME--GRFSEKSDVFSFGVLLLEIVSGRKNTSFY 646 (760)
Q Consensus 583 --------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSfGv~l~ElltG~~p~~~~ 646 (760)
+|||+++.+.... ......||+.|+|||++.. ..++.++|||||||+||||++|+.||...
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 1445444332111 1123468999999999864 45899999999999999999999998632
Q ss_pred cccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 647 HEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
... .. ....+.... .+... .....+.+|+..||+.+|.+||++.|+++
T Consensus 247 ~~~-----~q-li~~lk~~p-------~lpi~---~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 247 NNF-----SQ-LISELKRGP-------DLPIK---GKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CcH-----HH-HHHHHhcCC-------CCCcC---CCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 211 11 111111110 01000 11245778889999999999999999984
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=211.82 Aligned_cols=187 Identities=28% Similarity=0.443 Sum_probs=136.7
Q ss_pred cccccCCceeEEEEEecCCc-----------EEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 501 NKLGQGGFGPVYKGKLQDGQ-----------EIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~~-----------~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
+.||+|+||.||+|...+.. .|++|.+...... ...|.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46999999999999975432 5788877644333 6789999999999999999999999988 778999
Q ss_pred EeccCCCChhhhh----------------------------------------------------------ccccceeEe
Q 004345 570 YEYMPNKSLDSFL----------------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 570 ~Ey~~~gsL~~~L----------------------------------------------------------~DFGla~~~ 591 (760)
|||+++|+|.+++ +|||+++..
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~ 158 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV 158 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence 9999999998764 144544432
Q ss_pred cCCCcccccceeeeeccccCccccccC--CCCccchhHHHHHHHHHHHhC-CCCCCCCcccccccHHHHHHHhccCCCcc
Q 004345 592 GGNQDQAATKRLVGTYGYMSPEYAMEG--RFSEKSDVFSFGVLLLEIVSG-RKNTSFYHEEFELTLLGYAWKLWNDNNVI 668 (760)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDVwSfGv~l~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (760)
.. .....++..|+|||++... .++.++||||||+++|||++| ..|+....... ... .+.....
T Consensus 159 ~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~---~~~----~~~~~~~- 224 (259)
T cd05037 159 LS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE---KER----FYQDQHR- 224 (259)
T ss_pred cc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh---HHH----HHhcCCC-
Confidence 21 1123467789999999876 789999999999999999995 66654322110 000 0000000
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 669 DLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 669 ~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
+. ......+.+++.+||+.+|.+|||+.+|++.|+
T Consensus 225 ------~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 225 ------LP----MPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred ------CC----CCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 001156788999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=212.57 Aligned_cols=200 Identities=24% Similarity=0.340 Sum_probs=145.6
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-----ccchHhHHHHHHHHhcCCCCccceeeeEEEeC--Cee
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-----GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EEN 566 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~ 566 (760)
++|++.+.||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999864 58899999885321 12245788999999999999999999998764 457
Q ss_pred EEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCc
Q 004345 567 MLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~ 596 (760)
++||||+++++|.+++ +|||+++.+.....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 8999999999998763 38998875532111
Q ss_pred c-cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 Q-AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 ~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
. .......++..|+|||.+.+..++.++|||||||++|||++|+.|+...... .. ........ ..
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-----~~-~~~~~~~~-----~~--- 227 (265)
T cd06652 162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-----AA-IFKIATQP-----TN--- 227 (265)
T ss_pred cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-----HH-HHHHhcCC-----CC---
Confidence 1 1122346888999999998888999999999999999999999998532111 00 11111000 00
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+......+.+++.+|+. +|++||+++||++
T Consensus 228 -~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 228 -PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred -CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 11122233456677778885 8999999999976
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.4e-23 Score=218.82 Aligned_cols=196 Identities=25% Similarity=0.422 Sum_probs=144.5
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.+.|++.+.||+|+||.||+|... +++.||+|.+..... ...+++.+|++++++++||||++++++|...+..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 356888899999999999999864 688999999864322 2345789999999999999999999999999999999
Q ss_pred EeccCCCChhhh---------------------------------------------------hccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~ 598 (760)
+||+++ +|.++ |+|||+++.....
T Consensus 94 ~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~---- 168 (307)
T cd06607 94 MEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA---- 168 (307)
T ss_pred HHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC----
Confidence 999974 44332 1388877654321
Q ss_pred ccceeeeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 599 ATKRLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
....++..|+|||.+. ...++.++||||||+++|||++|+.|+...... ....... .... +.+
T Consensus 169 --~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~------~~~~~~~-~~~~-----~~~ 234 (307)
T cd06607 169 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIA-QNDS-----PTL 234 (307)
T ss_pred --CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH------HHHHHHh-cCCC-----CCC
Confidence 1245788999999874 456889999999999999999999997532211 1011100 0000 011
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
. .......+.+++.+||+.+|++||++.+|+..
T Consensus 235 ~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 235 S---SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred C---chhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 11123467888999999999999999999874
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-23 Score=221.05 Aligned_cols=191 Identities=23% Similarity=0.315 Sum_probs=142.9
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEEEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~ 570 (760)
+|+..+.||+|+||.||++... +++.||+|++.+. .....+.+..|..++..+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677899999999999999854 6889999999753 2234467888999998885 578889999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++|+|..++ +|||+++...... ...
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~--~~~ 158 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG--VTT 158 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC--ccc
Confidence 999999997652 4999987542221 122
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....||+.|+|||++....++.++|||||||++|||++|+.||...... ..... .. .... . .+
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~~~---i~-~~~~------~----~p 221 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED---ELFQS---IM-EHNV------S----YP 221 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHH---HH-hCCC------C----CC
Confidence 3456899999999999989999999999999999999999998643221 11111 11 1110 0 01
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNM 705 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~ 705 (760)
......+.+++.+|++.+|.+|++.
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 222 KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1112456788899999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-22 Score=206.78 Aligned_cols=201 Identities=24% Similarity=0.380 Sum_probs=153.7
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeC--CeeEEEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EENMLIY 570 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~lV~ 570 (760)
+|+..+.||+|++|.||+|... +++.|++|++..... ...+.+.+|+.++++++||||+++++.+... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677899999999999999976 688999999875432 4567899999999999999999999999988 8899999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++++|.+++ +|||.+............
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT 160 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence 999999998763 388888766443321112
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....++..|+|||.+.....+.++||||||++++||++|+.|+..... ................ .+
T Consensus 161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~---------~~ 226 (260)
T cd06606 161 GSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-----PMAALYKIGSSGEPPE---------IP 226 (260)
T ss_pred cCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-----hHHHHHhccccCCCcC---------CC
Confidence 335678899999999888899999999999999999999999864331 1111111111111111 11
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......+.+++.+|++.+|++||++.++++
T Consensus 227 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 227 EHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred cccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 112356778889999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-23 Score=224.17 Aligned_cols=193 Identities=19% Similarity=0.257 Sum_probs=140.6
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHH-HHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVM-VISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~-~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
+.||+|+||.||+++.. +++.||+|++.+.. .....++.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999965 57889999987432 223345555554 56789999999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..++ +|||+++...... .......|
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--~~~~~~~g 158 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--GTTSTFCG 158 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC--CCcccccC
Confidence 9997652 3999987542211 12234579
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
|+.|||||++....++.++|||||||++|||++|+.||...... .... ... .... .+.. ....
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~---~i~-~~~~------~~~~----~~~~ 221 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA---EMYD---NIL-NKPL------QLKP----NITN 221 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH---HHHH---HHH-hCCc------CCCC----CCCH
Confidence 99999999999999999999999999999999999998632211 1111 111 1000 0011 1123
Q ss_pred HHHHHHHhcccCCcCCCCCHHHHHHHH
Q 004345 686 RCVNVGLLCVQEFVKDRPNMPTVVSML 712 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~~ev~~~L 712 (760)
.+.+++.+|++.||.+||++.+.+..+
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~~~~~~i 248 (325)
T cd05602 222 SARHLLEGLLQKDRTKRLGAKDDFMEI 248 (325)
T ss_pred HHHHHHHHHcccCHHHCCCCCCCHHHH
Confidence 567788899999999999987554443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.9e-23 Score=213.01 Aligned_cols=197 Identities=21% Similarity=0.364 Sum_probs=148.2
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|++.+.||+|+||.||++... +++.+|+|.+... .....+.+.+|+.++++++|+||+++++.+......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4788899999999999999965 5789999998643 223456788999999999999999999999999999999999
Q ss_pred cCCCChhhhh-----------------------------------------------------ccccceeEecCCCcccc
Q 004345 573 MPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 573 ~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
+++++|.+++ +|||.+........ .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~--~ 158 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME--L 158 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc--c
Confidence 9999987653 26666655432211 1
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....|++.|+|||+.....++.++||||||++++||++|..|+..... ........ .+.....
T Consensus 159 ~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~-~~~~~~~--------- 222 (257)
T cd08225 159 AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL------HQLVLKIC-QGYFAPI--------- 222 (257)
T ss_pred ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHh-cccCCCC---------
Confidence 1224578899999999888899999999999999999999999853221 11111111 1111110
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.......+.+++.+|++.+|++|||+.+|++
T Consensus 223 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 223 SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1111245778889999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.1e-23 Score=215.12 Aligned_cols=202 Identities=24% Similarity=0.359 Sum_probs=149.1
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|+..+.||+|++|.||++... +++.+|+|++.... ....+++.+|++++++++||||+++++.+......++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35778899999999999999975 68899999987653 34556799999999999999999999999999999999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+++++|.+++ .|||++..+... ..
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~----~~ 156 (265)
T cd06605 81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS----LA 156 (265)
T ss_pred cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH----Hh
Confidence 9999988763 255554433111 01
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....++..|+|||.+....++.++||||||++++||++|+.|+....... ............. . .+.+...
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~-~-----~~~~~~~-- 227 (265)
T cd06605 157 KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYIVNE-P-----PPRLPSG-- 227 (265)
T ss_pred hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHHhcC-C-----CCCCChh--
Confidence 12567889999999998899999999999999999999999986432111 1111111111111 0 0011110
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.....+.+++.+||+.||++|||+.+++.
T Consensus 228 -~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 228 -KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred -hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 02345778889999999999999999976
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=211.37 Aligned_cols=202 Identities=29% Similarity=0.463 Sum_probs=150.6
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|++.+.||+|+||.||+|... +++.|++|.++.... ...+.+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5788899999999999999854 688999999875543 2567899999999999999999999999999999999999
Q ss_pred cCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc--c
Q 004345 573 MPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA--T 600 (760)
Q Consensus 573 ~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~--~ 600 (760)
+++++|.+++ +|||++........... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 160 (264)
T cd06626 81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEV 160 (264)
T ss_pred CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccc
Confidence 9999998763 38888876543222111 1
Q ss_pred ceeeeeccccCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 601 KRLVGTYGYMSPEYAMEGR---FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~---~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
....++..|+|||.+.... ++.++||||||++++|+++|+.||....... ....... .+. .+.+..
T Consensus 161 ~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-----~~~~~~~-~~~-----~~~~~~ 229 (264)
T cd06626 161 QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-----QIMFHVG-AGH-----KPPIPD 229 (264)
T ss_pred cCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-----HHHHHHh-cCC-----CCCCCc
Confidence 2346788999999998766 8899999999999999999999986332111 0011000 000 111111
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. ......+.+++.+||+.+|++||++.+++.
T Consensus 230 ~--~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 230 S--LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred c--cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 011345567888999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=216.12 Aligned_cols=207 Identities=16% Similarity=0.239 Sum_probs=151.7
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||++... .++.||+|.+.... ....+.+.+|+.+++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 46888999999999999999964 57899999987543 233457889999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCc----
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD---- 596 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~---- 596 (760)
||+++++|.++| .|||+++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY 160 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence 999999998763 38888764211000
Q ss_pred ---------ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCc
Q 004345 597 ---------QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 597 ---------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (760)
........++..|+|||.+....++.++||||||+++|||++|+.||...... ....... .+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~------~~~~~~~-~~~- 232 (305)
T cd05609 161 EGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE------ELFGQVI-SDD- 232 (305)
T ss_pred ccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHH-hcc-
Confidence 00111245788999999998888999999999999999999999998532111 1111110 110
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
...+.... .....+.+++.+||+.+|++||++.++.++|+..
T Consensus 233 --~~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~ 274 (305)
T cd05609 233 --IEWPEGDE----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR 274 (305)
T ss_pred --cCCCCccc----cCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence 00111111 1224567899999999999999988888877653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-23 Score=213.48 Aligned_cols=208 Identities=22% Similarity=0.312 Sum_probs=146.8
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe-----eEEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE-----NMLI 569 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~-----~~lV 569 (760)
.|...+++|.|+||.||+|++. +++.||||+.-.... ---+|+++|++++|||||+|+-++....+ ..||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 3555699999999999999964 578999998753321 22379999999999999999998865432 3599
Q ss_pred EeccCCCChhhh-------------------------------------------------------hccccceeEecCC
Q 004345 570 YEYMPNKSLDSF-------------------------------------------------------LFDFGLARIFGGN 594 (760)
Q Consensus 570 ~Ey~~~gsL~~~-------------------------------------------------------L~DFGla~~~~~~ 594 (760)
|||||. +|..+ |+|||.|+.+..+
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG 179 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence 999984 33332 3699999998655
Q ss_pred CcccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCc------
Q 004345 595 QDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNV------ 667 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~------ 667 (760)
+.. .....|..|+|||.+.+. .|+.+.||||.||++.||+-|++-|......++...+..+.....+.++
T Consensus 180 epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~ 256 (364)
T KOG0658|consen 180 EPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPN 256 (364)
T ss_pred CCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcc
Confidence 433 346779999999999865 5999999999999999999999988754443333322222111111111
Q ss_pred -cccccccccCC-----CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 668 -IDLVDPLISES-----GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 668 -~~~~d~~l~~~-----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.+.-.+.+... .......+.++++.++++.+|.+|.++.|++..
T Consensus 257 y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 257 YTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred cccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11111222211 122334677889999999999999999998863
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-23 Score=223.26 Aligned_cols=187 Identities=22% Similarity=0.269 Sum_probs=138.2
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHH-HHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVM-VISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~-~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
++||+|+||.||+|+.. +++.||+|++.+.. .....++.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999964 67899999986432 223445666655 67889999999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..++ +|||+++...... .......|
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g 158 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--ETTSTFCG 158 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--CccccccC
Confidence 9986542 4999987532211 12234578
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
|+.|+|||.+....++.++|||||||++|||++|+.||...... ....... .... ..+.....
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~-~~~~----------~~~~~~~~ 221 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS------QMYDNIL-HKPL----------QLPGGKTV 221 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH------HHHHHHh-cCCC----------CCCCCCCH
Confidence 99999999999989999999999999999999999998632211 1111111 1100 01111234
Q ss_pred HHHHHHHhcccCCcCCCCCHH
Q 004345 686 RCVNVGLLCVQEFVKDRPNMP 706 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~~ 706 (760)
.+.+++.+|++.||.+||++.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 222 AACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHHccCCHhhcCCCC
Confidence 577889999999999999864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-22 Score=214.76 Aligned_cols=211 Identities=21% Similarity=0.315 Sum_probs=146.0
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.+.||+|++|.||+|..+ +++.||||.+.... ......+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999965 67899999987542 22335678999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+++ +|..++ +|||+++....... ...
T Consensus 85 ~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~ 161 (291)
T cd07844 85 LDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK--TYS 161 (291)
T ss_pred CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc--ccc
Confidence 985 776542 38888765422111 111
Q ss_pred eeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC---Cccc------c-
Q 004345 602 RLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN---NVID------L- 670 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~------~- 670 (760)
...++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... .............. .... .
T Consensus 162 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07844 162 NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV--EDQLHKIFRVLGTPTEETWPGVSSNPEFK 239 (291)
T ss_pred ccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH--HHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence 2346789999999875 45889999999999999999999998543211 11111111111100 0000 0
Q ss_pred ------c-cccccCCC-CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 671 ------V-DPLISESG-FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 671 ------~-d~~l~~~~-~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. ...+.... .......+.+++.+|++.+|++|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0 00000000 0011256678999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-22 Score=211.41 Aligned_cols=198 Identities=24% Similarity=0.374 Sum_probs=147.4
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEe--CCeeEEEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE--REENMLIY 570 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~--~~~~~lV~ 570 (760)
+|++.+.||.|+||.||++.. .+++.+|+|.+... .....+.+.+|++++++++||||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477889999999999999985 46789999998643 23345678899999999999999999998864 34579999
Q ss_pred eccCCCChhhhh-----------------------------------------------------------ccccceeEe
Q 004345 571 EYMPNKSLDSFL-----------------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 571 Ey~~~gsL~~~L-----------------------------------------------------------~DFGla~~~ 591 (760)
||+++++|..++ .|||+++..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999886542 266666654
Q ss_pred cCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccc
Q 004345 592 GGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (760)
...... .....++..|+|||.+....++.++||||||++++||++|+.|+...... .+. +....+...
T Consensus 161 ~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~----~~~~~~~~~--- 228 (265)
T cd08217 161 GHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QLA----SKIKEGKFR--- 228 (265)
T ss_pred cCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HHH----HHHhcCCCC---
Confidence 322211 12346889999999999888999999999999999999999998643211 111 111111110
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+......+.+++.+|++.+|++||++.+|+++
T Consensus 229 ------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 ------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ------CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1112233567889999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-22 Score=215.74 Aligned_cols=208 Identities=23% Similarity=0.343 Sum_probs=142.0
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcC---CCCccceeeeEEEeC-----C
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNL---QHRNLVRLLGCCVER-----E 564 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l---~H~nIv~l~g~~~~~-----~ 564 (760)
+|++.+.||+|+||.||+|... +++.||+|.++... ......+.+|+.+++++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999864 68899999987532 22234567788877765 699999999998652 4
Q ss_pred eeEEEEeccCCCChhhh----------------------------------------------------hccccceeEec
Q 004345 565 ENMLIYEYMPNKSLDSF----------------------------------------------------LFDFGLARIFG 592 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~----------------------------------------------------L~DFGla~~~~ 592 (760)
..++||||+++ +|..+ |+|||+++...
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 57999999985 55443 24999988654
Q ss_pred CCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc---CCCcc-
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN---DNNVI- 668 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~- 668 (760)
... ......++..|+|||++.+..++.++|||||||++|||++|+.||........ ......... .....
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07863 160 CQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ---LGKIFDLIGLPPEDDWPR 233 (288)
T ss_pred Ccc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH---HHHHHHHhCCCChhhCcc
Confidence 221 12235678999999999988999999999999999999999998854322111 111111000 00000
Q ss_pred ------cccccccc---CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 669 ------DLVDPLIS---ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 669 ------~~~d~~l~---~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+... ..........+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000 0000112245678999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4e-22 Score=210.86 Aligned_cols=211 Identities=20% Similarity=0.322 Sum_probs=149.4
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999964 68899999987543 33456899999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+ +++|.+++ +|||+++....... ....
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~ 158 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-RLYS 158 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-Cccc
Confidence 9 99987652 38888876543221 1122
Q ss_pred eeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC------------Ccc
Q 004345 602 RLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN------------NVI 668 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 668 (760)
...++..|+|||.+... .++.++||||+|++++||++|.+++...... ............. ...
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI---EQLAIVFRTLGTPNEETWPGLTSLPDYN 235 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH---HHHHHHHHHcCCCChHHHhhccCcchhh
Confidence 35688999999998654 4689999999999999999997776432211 1111111111000 000
Q ss_pred cccccccc----CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 669 DLVDPLIS----ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 669 ~~~d~~l~----~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.+..+... ..........+.+++.+|++.+|++|||++++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 236 KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000000 00001123677889999999999999999999863
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-22 Score=217.42 Aligned_cols=147 Identities=18% Similarity=0.268 Sum_probs=111.9
Q ss_pred cccccccC--CceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 499 LANKLGQG--GFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 499 ~~~~lG~G--~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
+.++||+| +|++||++.. ++++.||+|+++... ....+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45889999 6899999985 578999999997542 233456778999999999999999999999999999999999
Q ss_pred CCCChhhhhc----------------------------------------------------cccceeEecCCCc-c---
Q 004345 574 PNKSLDSFLF----------------------------------------------------DFGLARIFGGNQD-Q--- 597 (760)
Q Consensus 574 ~~gsL~~~L~----------------------------------------------------DFGla~~~~~~~~-~--- 597 (760)
++|+|.+++. ||+.+........ .
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 161 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVV 161 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccccc
Confidence 9999987641 2322111100000 0
Q ss_pred -cccceeeeeccccCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 598 -AATKRLVGTYGYMSPEYAME--GRFSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 598 -~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
.......++..|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 162 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred ccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 00112345678999999976 4589999999999999999999999864
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-22 Score=221.15 Aligned_cols=141 Identities=21% Similarity=0.328 Sum_probs=115.2
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
...+|++.+.||+|+||.||+|+.. +++.||+|..... ....|+.++++++||||+++++++......++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3467999999999999999999965 5678999975322 34579999999999999999999999999999999
Q ss_pred ccCCCChhhhh---------------------------------------------------ccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|+. ++|..++ +|||+++..... ...
T Consensus 138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~ 213 (357)
T PHA03209 138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA---PAF 213 (357)
T ss_pred ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC---ccc
Confidence 995 4665542 499998753211 112
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~ 643 (760)
....||+.|+|||++....++.++|||||||++|||+++..++
T Consensus 214 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 2356899999999999999999999999999999999976654
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-22 Score=216.19 Aligned_cols=142 Identities=24% Similarity=0.465 Sum_probs=111.4
Q ss_pred cccccCCceeEEEEEec---CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEe--CCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ---DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE--REENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~--~~~~~lV~Ey~~~ 575 (760)
.+||+|+||.||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++.. +...++|+||+++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 68999999999999964 45789999986432 33568899999999999999999999854 4567999999875
Q ss_pred CChhhh---------------------------------------------------------------hccccceeEec
Q 004345 576 KSLDSF---------------------------------------------------------------LFDFGLARIFG 592 (760)
Q Consensus 576 gsL~~~---------------------------------------------------------------L~DFGla~~~~ 592 (760)
. |.++ |+|||+++.+.
T Consensus 85 ~-l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07867 85 D-LWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred c-HHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence 3 2111 24999998764
Q ss_pred CCCcc-cccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 593 GNQDQ-AATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 593 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
..... .......+|+.|+|||.+.. ..++.++|||||||++|||+||+.||..
T Consensus 164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred CCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 33221 12234578999999999876 4589999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=222.91 Aligned_cols=151 Identities=24% Similarity=0.387 Sum_probs=125.3
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+++.. +++.||+|+++.. .......+.+|+.++.+++||||+++++.+.+++..+|||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999864 6889999999743 2334567889999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCcc---
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQ--- 597 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~--- 597 (760)
||+++|+|.++| +|||+++.+......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~ 160 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY 160 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence 999999998763 399998754221100
Q ss_pred ------------------------------cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 598 ------------------------------AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 598 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
......+||+.|||||++.+..++.++|||||||++|||++|+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 001134799999999999999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-22 Score=213.58 Aligned_cols=213 Identities=23% Similarity=0.338 Sum_probs=146.9
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++++|.+.+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+.++++++|+||+++++++..++..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 457899999999999999999985 4688999999875432 33346789999999999999999999999999999999
Q ss_pred eccCCCChhhh---------------------------------------------------hccccceeEecCCCcccc
Q 004345 571 EYMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAA 599 (760)
Q Consensus 571 Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~ 599 (760)
||++ ++|..+ |+|||+++....... .
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--~ 159 (291)
T cd07870 83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ--T 159 (291)
T ss_pred eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC--C
Confidence 9996 555332 248998875432211 1
Q ss_pred cceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC-------------C
Q 004345 600 TKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND-------------N 665 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~-------------~ 665 (760)
.....++..|+|||.+.+. .++.++|||||||++|||++|+.||....... ......+..... .
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07870 160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF--EQLEKIWTVLGVPTEDTWPGVSKLPN 237 (291)
T ss_pred CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH--HHHHHHHHHcCCCChhhhhhhhhccc
Confidence 1234578899999998754 57899999999999999999999986433211 111111111000 0
Q ss_pred Ccccccc---c-cccCC-CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 666 NVIDLVD---P-LISES-GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 666 ~~~~~~d---~-~l~~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+... + .+... ........+.+++.+|++.||.+|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 238 YKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000000 0 00000 00001245668889999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.4e-23 Score=214.34 Aligned_cols=207 Identities=22% Similarity=0.301 Sum_probs=153.4
Q ss_pred HHhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc--------------cchHhHHHHHHHHhcCCCCccce
Q 004345 491 ANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG--------------QGQEEFMNEVMVISNLQHRNLVR 555 (760)
Q Consensus 491 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--------------~~~~~f~~E~~~l~~l~H~nIv~ 555 (760)
....|+|++.+.||+|.||.|-+|.. .+++.||||++.+... ...+...+|+.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 34568899999999999999999995 4789999999975311 11357889999999999999999
Q ss_pred eeeEEEeC--CeeEEEEeccCCCChhhh--------------------------------------------------hc
Q 004345 556 LLGCCVER--EENMLIYEYMPNKSLDSF--------------------------------------------------LF 583 (760)
Q Consensus 556 l~g~~~~~--~~~~lV~Ey~~~gsL~~~--------------------------------------------------L~ 583 (760)
|+.+-.+. +..|||+|||..|.+... |+
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIs 252 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKIS 252 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEee
Confidence 99998654 468999999998876431 35
Q ss_pred cccceeEecCCCc---ccccceeeeeccccCccccccCC----CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHH
Q 004345 584 DFGLARIFGGNQD---QAATKRLVGTYGYMSPEYAMEGR----FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLG 656 (760)
Q Consensus 584 DFGla~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~ 656 (760)
|||.+..+..... .......+||+.|||||.+..+. .+.+.||||+||+||-|+.|+.||.... ...+.
T Consensus 253 DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~---~~~l~- 328 (576)
T KOG0585|consen 253 DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF---ELELF- 328 (576)
T ss_pred ccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch---HHHHH-
Confidence 9999987632211 12233478999999999998733 3568899999999999999999985221 11111
Q ss_pred HHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHH
Q 004345 657 YAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712 (760)
Q Consensus 657 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 712 (760)
.+++...+.-...++.-+++.+|+.++|+.||+.|.+..+|....
T Consensus 329 -----------~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 329 -----------DKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred -----------HHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 112222222222234456778899999999999999999998765
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=220.99 Aligned_cols=219 Identities=18% Similarity=0.251 Sum_probs=150.3
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC-----ee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE-----EN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~-----~~ 566 (760)
.++|++.++||+|+||.||+|+. .+++.||||+++... ......+.+|+.++++++|+||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999999985 468999999986432 234567889999999999999999999876543 57
Q ss_pred EEEEeccCCCChhhh-------------------------------------------------hccccceeEecCCCcc
Q 004345 567 MLIYEYMPNKSLDSF-------------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~-------------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
++|+||+++ +|..+ |+|||+++........
T Consensus 84 ~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 162 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH 162 (336)
T ss_pred EEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccc
Confidence 999999975 54432 2499998875432211
Q ss_pred c-ccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC---Ccccccc
Q 004345 598 A-ATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN---NVIDLVD 672 (760)
Q Consensus 598 ~-~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d 672 (760)
. ......|+..|+|||.+.. ..++.++|||||||++|||++|+.||....... ............ ....+.+
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
T cd07849 163 TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH---QLNLILGVLGTPSQEDLNCIIS 239 (336)
T ss_pred cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCCHHHHHHhhc
Confidence 1 1123568899999998765 468999999999999999999999985322111 111111111110 0000000
Q ss_pred cc-------c--cCCCC-----HHHHHHHHHHHHhcccCCcCCCCCHHHHHHH--Hhccc
Q 004345 673 PL-------I--SESGF-----KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM--LNSEI 716 (760)
Q Consensus 673 ~~-------l--~~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~--L~~~~ 716 (760)
.. + ..... +.....+.+++.+||+.+|++|||+.|+++. ++...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 00 0 00000 0113457899999999999999999999986 55443
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-22 Score=215.93 Aligned_cols=144 Identities=23% Similarity=0.457 Sum_probs=112.3
Q ss_pred ccccccCCceeEEEEEec---CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEe--CCeeEEEEeccC
Q 004345 500 ANKLGQGGFGPVYKGKLQ---DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE--REENMLIYEYMP 574 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~--~~~~~lV~Ey~~ 574 (760)
.++||+|+||.||+|+.. +++.+|+|.+... .....+.+|+.++++++||||+++++++.. +...++|+||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 368999999999999854 4678999998643 234567899999999999999999999864 456789999986
Q ss_pred CCChhhh---------------------------------------------------------------hccccceeEe
Q 004345 575 NKSLDSF---------------------------------------------------------------LFDFGLARIF 591 (760)
Q Consensus 575 ~gsL~~~---------------------------------------------------------------L~DFGla~~~ 591 (760)
+ +|..+ |+|||+++.+
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07868 84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence 4 33221 2499999876
Q ss_pred cCCCcc-cccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCC
Q 004345 592 GGNQDQ-AATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFY 646 (760)
Q Consensus 592 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~ 646 (760)
...... .......||+.|||||++.+. .++.++||||+||++|||++|+.||...
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 432211 222346789999999998764 5899999999999999999999998643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=214.99 Aligned_cols=210 Identities=21% Similarity=0.297 Sum_probs=144.9
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|++.+.||+|+||.||+|+.. +++.+|+|++.... ......+.+|+.++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778899999999999999964 68899999986432 22345688999999999999999999999999999999999
Q ss_pred cCCCChhhh---------------------------------------------------hccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
+++ +|..+ |+|||+++.+..... ...
T Consensus 81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~ 157 (284)
T cd07839 81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR--CYS 157 (284)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC--CcC
Confidence 974 55443 238998876532221 112
Q ss_pred eeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCC------ccccccc-
Q 004345 602 RLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN------VIDLVDP- 673 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~d~- 673 (760)
...++..|+|||.+.+. .++.++|||||||++|||++|+.|+....... .............. ..+..+.
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD--DQLKRIFRLLGTPTEESWPGVSKLPDYK 235 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH--HHHHHHHHHhCCCChHHhHHhhhccccc
Confidence 34578899999998764 47899999999999999999999864322111 01111111000000 0000000
Q ss_pred ---cccCC-----CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 674 ---LISES-----GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 674 ---~l~~~-----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..... ........+.+++.+||+.||.+|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 236 PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000 00112356678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-22 Score=215.33 Aligned_cols=214 Identities=19% Similarity=0.311 Sum_probs=146.2
Q ss_pred ccccccccccCCceeEEEEEec---CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeC--CeeE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ---DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EENM 567 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~ 567 (760)
+|++.++||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999964 47899999997632 34456788999999999999999999999988 7899
Q ss_pred EEEeccCCCChhhh-----------------------------------------------------------hccccce
Q 004345 568 LIYEYMPNKSLDSF-----------------------------------------------------------LFDFGLA 588 (760)
Q Consensus 568 lV~Ey~~~gsL~~~-----------------------------------------------------------L~DFGla 588 (760)
+||||+++. |..+ |+|||++
T Consensus 81 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAEHD-LWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCCcC-HHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 999999753 3221 1378887
Q ss_pred eEecCCCc-ccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCccccccc------HHHHHHH
Q 004345 589 RIFGGNQD-QAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELT------LLGYAWK 660 (760)
Q Consensus 589 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~------~~~~~~~ 660 (760)
+.+..... ........++..|+|||.+.+. .++.++|||||||+++||++|+.|+.....+.... .......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 76533221 1122345678899999988764 58899999999999999999999986443322000 0000000
Q ss_pred hccC------------CCccccccccccCCCC----H-------HHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 661 LWND------------NNVIDLVDPLISESGF----K-------MEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 661 ~~~~------------~~~~~~~d~~l~~~~~----~-------~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+.. .......+........ . .....+.+++.+|++.||++|||+.|+++
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000 0000000000000000 0 12246788999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-22 Score=213.01 Aligned_cols=210 Identities=20% Similarity=0.311 Sum_probs=147.4
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccCcc-----chHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQ-----GQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-----~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
+|++.+.||+|+||.||+|... +++.||||++...... ....+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778899999999999999964 6889999999754322 234678899999999999999999999999999999
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
|||+ +++|.++| .|||+++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-- 157 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR-- 157 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCc--
Confidence 9999 88887653 38888876543221
Q ss_pred ccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC---------CCcc
Q 004345 599 ATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND---------NNVI 668 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 668 (760)
......+++.|+|||.+.. ..++.++|||||||+++||++|..++....+. ............ ....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI---DQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH---HHHHHHHHHcCCCchhhhhhccccc
Confidence 1122346788999998864 45789999999999999999997776532221 111111110000 0000
Q ss_pred ccccccccCC-----CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 669 DLVDPLISES-----GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 669 ~~~d~~l~~~-----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.......... ........+.+++.+||+.+|++|||+.||++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000 011223567899999999999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-22 Score=206.27 Aligned_cols=198 Identities=27% Similarity=0.483 Sum_probs=151.6
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
.|+..+.||+|++|.||++... +++.+++|++........+.+.+|+.++++++|+||+++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3677899999999999999975 688999999976655567789999999999999999999999999999999999999
Q ss_pred CCChhhhh---------------------------------------------------ccccceeEecCCCccccccee
Q 004345 575 NKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 575 ~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
+++|.+++ .|||.+........ ....
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~ 157 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---RNTM 157 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---ccce
Confidence 99987653 37777766543221 2345
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
.++..|+|||.+....++.++||||||++++||++|+.|+........ .. .. ..........+ ...
T Consensus 158 ~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~---~~-~~~~~~~~~~~-------~~~ 223 (253)
T cd05122 158 VGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA---LF---KI-ATNGPPGLRNP-------EKW 223 (253)
T ss_pred ecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH---HH---HH-HhcCCCCcCcc-------ccc
Confidence 688899999999888899999999999999999999999864321110 00 00 00111111100 001
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.+++.+||+.||++|||+.++++
T Consensus 224 ~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 224 SDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 245778889999999999999999975
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-22 Score=216.37 Aligned_cols=201 Identities=20% Similarity=0.262 Sum_probs=149.1
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|++|.||++... +++.+|+|.+..... ...+.+.+|++++++++|+||+++++.+......++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999965 589999999975432 24567899999999999999999999999999999999
Q ss_pred eccCCCChhhhh----------------------------------------------------ccccceeEecCCCcc-
Q 004345 571 EYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQ- 597 (760)
Q Consensus 571 Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~- 597 (760)
||+++++|.+++ .|||++.........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 999999997753 278877643211100
Q ss_pred --------------------------cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCccccc
Q 004345 598 --------------------------AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFE 651 (760)
Q Consensus 598 --------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~ 651 (760)
.......|+..|+|||.+.+..++.++||||||+++|||++|+.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~- 239 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE- 239 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH-
Confidence 01123467889999999998889999999999999999999999986332211
Q ss_pred ccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCC----HHHHHH
Q 004345 652 LTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPN----MPTVVS 710 (760)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt----~~ev~~ 710 (760)
.+ .... +..............+.+++.+||+.+|++||| +.++++
T Consensus 240 -~~----~~~~---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 240 -TF----SNIL---------KKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred -HH----HHHh---------cCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 01 1111 100000011113356788899999999999999 666655
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.5e-23 Score=222.41 Aligned_cols=208 Identities=18% Similarity=0.251 Sum_probs=145.8
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeC------
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER------ 563 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~------ 563 (760)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 457899999999999999999985 467899999987532 23345688999999999999999999988643
Q ss_pred CeeEEEEeccCCCChhhh-------------------------------------------------hccccceeEecCC
Q 004345 564 EENMLIYEYMPNKSLDSF-------------------------------------------------LFDFGLARIFGGN 594 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~-------------------------------------------------L~DFGla~~~~~~ 594 (760)
...++++|++ +++|..+ |+|||+++.....
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 171 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE 171 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC
Confidence 3568999988 6677554 2499999865321
Q ss_pred CcccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC---------
Q 004345 595 QDQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND--------- 664 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~--------- 664 (760)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ...........
T Consensus 172 -----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd07878 172 -----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID---QLKRIMEVVGTPSPEVLKKI 243 (343)
T ss_pred -----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH---HHHHHHHHhCCCCHHHHHhc
Confidence 223568999999999876 568999999999999999999999986422111 01100000000
Q ss_pred --CCccccccccccCCCCH--------HHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 665 --NNVIDLVDPLISESGFK--------MEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 665 --~~~~~~~d~~l~~~~~~--------~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
......+. .+.. .+. .....+.+++.+|++.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 244 SSEHARKYIQ-SLPH-MPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred chhhHHHHhh-cccc-ccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 0000 000 011346789999999999999999999863
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-22 Score=211.78 Aligned_cols=209 Identities=22% Similarity=0.315 Sum_probs=147.1
Q ss_pred cccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeC--CeeEEEEe
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EENMLIYE 571 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~lV~E 571 (760)
|++.+.||+|++|.||+|+.. +++.+|+|++.... ....+.+.+|++++++++|+||+++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567799999999999999965 57899999997653 33456788999999999999999999999988 88999999
Q ss_pred ccCCCChhhhh---------------------------------------------------ccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|+++ +|..++ +|||++........ ...
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-~~~ 158 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-ADY 158 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc-ccc
Confidence 9975 655432 48998886643321 112
Q ss_pred ceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC---CCcc---c----
Q 004345 601 KRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND---NNVI---D---- 669 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~---~---- 669 (760)
....++..|+|||.+.+ ..++.++||||||+++|||++|+.|+........ .......... .... +
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07840 159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ---LEKIFELCGSPTDENWPGVSKLPWF 235 (287)
T ss_pred cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCchhhccccccchhh
Confidence 23456788999998764 4589999999999999999999999864332211 1111111100 0000 0
Q ss_pred -------cccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 670 -------LVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 670 -------~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.....+...........+++++.+||+.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 236 ENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000000011112456789999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-22 Score=212.54 Aligned_cols=203 Identities=21% Similarity=0.367 Sum_probs=151.5
Q ss_pred HhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
..++.|+..+.||+|++|.||+|..+ +++.+++|++..... ..+.+.+|++++++++|+||+++++++......++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 35667888899999999999999976 688999999975433 5678999999999999999999999999999999999
Q ss_pred eccCCCChhhhh---------------------------------------------------ccccceeEecCCCcccc
Q 004345 571 EYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 571 Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
||+++++|.+++ +|||++....... ..
T Consensus 95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~--~~ 172 (286)
T cd06614 95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK--SK 172 (286)
T ss_pred eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch--hh
Confidence 999999998763 2566554332111 11
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....++..|+|||.+....++.++|||||||++|||++|+.|+........ .... ......... .
T Consensus 173 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~------~~~~-~~~~~~~~~-----~-- 238 (286)
T cd06614 173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA------LFLI-TTKGIPPLK-----N-- 238 (286)
T ss_pred hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH------HHHH-HhcCCCCCc-----c--
Confidence 1234567899999999888899999999999999999999999853222110 0000 011110100 0
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.......+.+++.+|++.+|.+||++.+|++.
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 239 PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred hhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 01112457788999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.4e-23 Score=225.54 Aligned_cols=149 Identities=32% Similarity=0.560 Sum_probs=127.9
Q ss_pred cccccccccCCceeEEEEE-ecCCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCC------eeEE
Q 004345 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE------ENML 568 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~------~~~l 568 (760)
+...+.||+|+||.||+|+ -..|+.||||.+++. .....+...+|+++|++++|+|||+++++-.+.. ...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 3445889999999999999 558999999999864 3456788999999999999999999999866543 5689
Q ss_pred EEeccCCCChhhhh---------------------------------------------------------ccccceeEe
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------------~DFGla~~~ 591 (760)
|||||++|||...| +|||.||.+
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel 174 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL 174 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence 99999999998873 499999988
Q ss_pred cCCCcccccceeeeeccccCccccc-cCCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Q 004345 592 GGNQDQAATKRLVGTYGYMSPEYAM-EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHE 648 (760)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~ 648 (760)
..+. .....+||..|+|||... ++.|+..+|.|||||++||.+||..||.....
T Consensus 175 ~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~ 229 (732)
T KOG4250|consen 175 DDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG 229 (732)
T ss_pred CCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence 6544 455689999999999998 58899999999999999999999999975443
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-22 Score=219.52 Aligned_cols=214 Identities=17% Similarity=0.276 Sum_probs=147.2
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCC-----e
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE-----E 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~-----~ 565 (760)
.++|++.+.||+|+||.||+++. .+++.||||.+... .......+.+|+.++++++|+||+++++++.... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45789999999999999999985 46899999998753 2334557889999999999999999999886543 4
Q ss_pred eEEEEeccCCCChhhh--------------------------------------------------hccccceeEecCCC
Q 004345 566 NMLIYEYMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQ 595 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~ 595 (760)
.++|+||+. ++|.++ |+|||+++......
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 162 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG 162 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc
Confidence 799999996 556543 24899988653321
Q ss_pred cccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHH--------hccCCC
Q 004345 596 DQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWK--------LWNDNN 666 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~--------~~~~~~ 666 (760)
.......++..|+|||.+.. ..++.++|||||||++|||++|+.||................. ......
T Consensus 163 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd07858 163 --DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEK 240 (337)
T ss_pred --ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchh
Confidence 11223467889999998865 4689999999999999999999999864321111111100000 000000
Q ss_pred cccccc-------ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 667 VIDLVD-------PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 667 ~~~~~d-------~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+.+. +.... ........+.+++.+||+.+|++|||+.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 241 ARRYIRSLPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hhHHHHhcCcccccCHHH-HcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 000000 00000 001123567899999999999999999999885
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=213.08 Aligned_cols=209 Identities=23% Similarity=0.327 Sum_probs=143.5
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|++.+.||+|++|.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999864 68899999986432 22345789999999999999999999999999999999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
++ ++|..++ +|||+++.+..... ..
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~--~~ 157 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TY 157 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc--cc
Confidence 96 4554431 38888765432211 11
Q ss_pred ceeeeeccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC-C-------------
Q 004345 601 KRLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND-N------------- 665 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~-~------------- 665 (760)
....++..|+|||.+.+.. ++.++||||||+++|||+||+.||....+.. .+.......-.. .
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07860 158 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIFRTLGTPDEVVWPGVTSLPDYK 235 (284)
T ss_pred ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhhhhHHHHHH
Confidence 2235678999999887644 6889999999999999999999986432211 111110000000 0
Q ss_pred -CccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 666 -NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 666 -~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.........+.. ........+.+++.+|++.||.+|||+.++++
T Consensus 236 ~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 236 PSFPKWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hhcccccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000000000 00011234668899999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-22 Score=216.06 Aligned_cols=150 Identities=25% Similarity=0.357 Sum_probs=124.5
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+++.. +++.||+|.+.+. .....+.+.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47889999999999999999964 6788999998642 2233456889999999999999999999999999999999
Q ss_pred eccCCCChhhhh---------------------------------------------------ccccceeEecCCCcccc
Q 004345 571 EYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 571 Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
||+++|+|..+| +|||+++.+...... .
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-~ 159 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV-Q 159 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce-e
Confidence 999999998763 399999876433221 1
Q ss_pred cceeeeeccccCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 600 TKRLVGTYGYMSPEYAME-----GRFSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
.....||+.|||||++.. ..++.++|||||||+||||++|+.||..
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 223569999999999875 5688999999999999999999999863
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-22 Score=211.90 Aligned_cols=198 Identities=22% Similarity=0.328 Sum_probs=148.5
Q ss_pred cccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 497 FQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
|...+.||+|++|.||++.. .+++.+++|++........+.+.+|+.++++++||||+++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 34457999999999999985 46889999998755445566789999999999999999999999999999999999999
Q ss_pred CChhhhh-------------------------------------------------ccccceeEecCCCcccccceeeee
Q 004345 576 KSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRLVGT 606 (760)
Q Consensus 576 gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt 606 (760)
++|.+++ +|||++....... .......|+
T Consensus 101 ~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~ 178 (285)
T cd06648 101 GALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV--PRRKSLVGT 178 (285)
T ss_pred CCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC--cccccccCC
Confidence 9998753 3777766443221 112234688
Q ss_pred ccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHH
Q 004345 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIR 686 (760)
Q Consensus 607 ~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 686 (760)
..|+|||.+....++.++|||||||++|||++|+.|+...... ...... .... .+.+.. .......
T Consensus 179 ~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~------~~~~~~-~~~~-----~~~~~~--~~~~~~~ 244 (285)
T cd06648 179 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL------QAMKRI-RDNL-----PPKLKN--LHKVSPR 244 (285)
T ss_pred ccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH------HHHHHH-HhcC-----CCCCcc--cccCCHH
Confidence 9999999998888999999999999999999999998532211 111111 1111 011111 0112246
Q ss_pred HHHHHHhcccCCcCCCCCHHHHHH
Q 004345 687 CVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 687 ~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+.+++.+||+.+|++||++.++++
T Consensus 245 l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 245 LRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHHHcccChhhCcCHHHHcc
Confidence 788999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-22 Score=207.88 Aligned_cols=201 Identities=22% Similarity=0.262 Sum_probs=152.0
Q ss_pred cccccccccccCCceeEEEEEecC-CcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++++.||.|.-|+||++.+.. +..+|+|++.+.. .+...+...|-+||+.++||.|+.||+.++.++..+|||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 356778999999999999999764 5899999998653 334456778999999999999999999999999999999
Q ss_pred eccCCCChhhhh----------------------------------------------------ccccceeEecC-----
Q 004345 571 EYMPNKSLDSFL----------------------------------------------------FDFGLARIFGG----- 593 (760)
Q Consensus 571 Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~----- 593 (760)
|||+||+|..++ +||-|+.....
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~ 236 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV 236 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee
Confidence 999999998752 37766532110
Q ss_pred ------------------------------C-------------------CcccccceeeeeccccCccccccCCCCccc
Q 004345 594 ------------------------------N-------------------QDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624 (760)
Q Consensus 594 ------------------------------~-------------------~~~~~~~~~~gt~~y~aPE~~~~~~~s~ks 624 (760)
. ......+..+||-.|+|||++.+..++.++
T Consensus 237 ~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAV 316 (459)
T KOG0610|consen 237 KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAV 316 (459)
T ss_pred ccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchh
Confidence 0 001223456899999999999999999999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCC
Q 004345 625 DVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPN 704 (760)
Q Consensus 625 DVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt 704 (760)
|.|+|||+||||+.|+.||.....++ ++ ..++-..+.-...+.....+.+|+.+.|..||.+|.-
T Consensus 317 DWWtfGIflYEmLyG~TPFKG~~~~~--Tl-------------~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg 381 (459)
T KOG0610|consen 317 DWWTFGIFLYEMLYGTTPFKGSNNKE--TL-------------RNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLG 381 (459)
T ss_pred hHHHHHHHHHHHHhCCCCcCCCCchh--hH-------------HHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhc
Confidence 99999999999999999997544332 11 1222221111112233456778888999999999998
Q ss_pred ----HHHHHH
Q 004345 705 ----MPTVVS 710 (760)
Q Consensus 705 ----~~ev~~ 710 (760)
+.||-+
T Consensus 382 ~~rGA~eIK~ 391 (459)
T KOG0610|consen 382 SKRGAAEIKR 391 (459)
T ss_pred cccchHHhhc
Confidence 777765
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-22 Score=221.80 Aligned_cols=148 Identities=23% Similarity=0.353 Sum_probs=123.4
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCC-C-----CccceeeeEEEeCCeeEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-H-----RNLVRLLGCCVEREENML 568 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H-----~nIv~l~g~~~~~~~~~l 568 (760)
+|++.+.||+|.||.|.||.. ++++.||||++++. .....+-..|+.+|..|+ | -|+|++++++...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 899999999999999999995 57999999999764 344566778999999997 4 389999999999999999
Q ss_pred EEeccCCCChhhhh------------------------------------------------------ccccceeEecCC
Q 004345 569 IYEYMPNKSLDSFL------------------------------------------------------FDFGLARIFGGN 594 (760)
Q Consensus 569 V~Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~ 594 (760)
|+|.+. -+|.++| +|||.|......
T Consensus 266 VfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~ 344 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR 344 (586)
T ss_pred eehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc
Confidence 999884 4666653 399999865322
Q ss_pred CcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccc
Q 004345 595 QDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEF 650 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~ 650 (760)
.. ..+-++.|+|||++.+.+|+.+.||||||||+.||++|.+-|....+.+
T Consensus 345 vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~D 395 (586)
T KOG0667|consen 345 VY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYD 395 (586)
T ss_pred ce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHH
Confidence 21 4677889999999999999999999999999999999987776544433
|
|
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-22 Score=212.71 Aligned_cols=201 Identities=24% Similarity=0.386 Sum_probs=144.1
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|+..++||+|+||.||++... +++.+|+|.+.... ......+.+|+.++.++. |+||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4555689999999999999954 68899999987543 234567899999999996 99999999999999999999999
Q ss_pred cCCCChhhh--------------------------------------------------------hccccceeEecCCCc
Q 004345 573 MPNKSLDSF--------------------------------------------------------LFDFGLARIFGGNQD 596 (760)
Q Consensus 573 ~~~gsL~~~--------------------------------------------------------L~DFGla~~~~~~~~ 596 (760)
+.. +|..+ |+|||+++.+....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 162 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI- 162 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC-
Confidence 864 22111 24888876543221
Q ss_pred ccccceeeeeccccCccccccC---CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEG---RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~---~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
......|+..|+|||.+... .++.++|||||||++|||++|+.||.... .......+... +. .+
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~-~~-----~~ 229 (288)
T cd06616 163 --AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVK-GD-----PP 229 (288)
T ss_pred --ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcC-CC-----CC
Confidence 11234578899999999766 68999999999999999999999986332 11111111111 11 11
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.+...........+.+++.+||+.+|++|||+.+|++.
T Consensus 230 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 230 ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111111233567889999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.4e-22 Score=211.43 Aligned_cols=194 Identities=25% Similarity=0.372 Sum_probs=148.6
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999964 68899999986432 234567899999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++++|.+++ .|||+++..... .
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-----~ 155 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-----T 155 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-----C
Confidence 999999997763 388888765332 2
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....+++.|+|||.+.....+.++||||||+++|||++|+.|+...... ...+....+.. .+..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~------~~~~--- 219 (290)
T cd05580 156 YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI-------QIYEKILEGKV------RFPS--- 219 (290)
T ss_pred CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHhcCCc------cCCc---
Confidence 2346889999999998888999999999999999999999998633211 01111111110 1111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
.....+.+++.+||+.||.+|| ++.|+++
T Consensus 220 -~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 220 -FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred -cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 1124667888999999999999 6666653
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-22 Score=208.43 Aligned_cols=197 Identities=20% Similarity=0.221 Sum_probs=149.8
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
+|++.+.||.|+||.||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999965 58899999997532 2346789999999999999999999999999999999999
Q ss_pred ccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
|+++++|..+| +|||++....... ...
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---~~~ 157 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---LTT 157 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc---ccc
Confidence 99999987653 3888777653321 122
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
...|+..|+|||.+....++.++||||||+++|||++|+.|+...... ........... .. ...+.
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~--~~--------~~~~~ 223 (258)
T cd05578 158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT----IRDQIRAKQET--AD--------VLYPA 223 (258)
T ss_pred ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc----HHHHHHHHhcc--cc--------ccCcc
Confidence 356788999999999888999999999999999999999998644322 11111111110 00 01111
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCH--HHHH
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNM--PTVV 709 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~--~ev~ 709 (760)
.....+.+++.+||+.||.+||++ +|++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 224 TWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred cCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 122567788999999999999999 5543
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.8e-22 Score=208.15 Aligned_cols=195 Identities=26% Similarity=0.350 Sum_probs=149.8
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|++.++||+|+||.||+++. .+++.+|+|.+.... .....++.+|++++++++|+||+++++++.+....++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 478889999999999999985 467899999987532 33456788999999999999999999999999999999999
Q ss_pred cCCCChhhhh------------------------------------------------------ccccceeEecCCCccc
Q 004345 573 MPNKSLDSFL------------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 573 ~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
+++++|..++ .|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~---- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN---- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC----
Confidence 9999987652 277777655332
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
......++..|+|||.+....++.++|+||||++++||++|+.|+...... .+.. ....+... .
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~~~----~~~~~~~~---------~ 220 (256)
T cd08530 157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ---DLRY----KVQRGKYP---------P 220 (256)
T ss_pred CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HHhcCCCC---------C
Confidence 122245788999999999989999999999999999999999998643211 1111 11111111 1
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
........+.+++.+|++.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 221 IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11223456888999999999999999999976
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.8e-22 Score=212.20 Aligned_cols=216 Identities=20% Similarity=0.317 Sum_probs=144.6
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe-----
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE----- 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~----- 565 (760)
.++|++.++||+|+||.||+|... +++.||||.+.... ......+.+|+.++++++||||++++++|...+.
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357899999999999999999964 68899999886432 2223456789999999999999999999876543
Q ss_pred ---eEEEEeccCCCChhhh---------------------------------------------------hccccceeEe
Q 004345 566 ---NMLIYEYMPNKSLDSF---------------------------------------------------LFDFGLARIF 591 (760)
Q Consensus 566 ---~~lV~Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~ 591 (760)
.++||||+++ +|..+ |+|||++..+
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 169 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAF 169 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence 4999999975 44432 2489988765
Q ss_pred cCCCcc--cccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC---
Q 004345 592 GGNQDQ--AATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN--- 665 (760)
Q Consensus 592 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--- 665 (760)
...... .......++..|+|||.+... .++.++||||||+++|||++|+.|+...........+..........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (310)
T cd07865 170 SLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWP 249 (310)
T ss_pred cCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence 332211 111234578899999988654 47899999999999999999999886433322222111111100000
Q ss_pred --Ccccccccc-ccCCC---------CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 666 --NVIDLVDPL-ISESG---------FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 666 --~~~~~~d~~-l~~~~---------~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+..+.. +.... .......+.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 250 GVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred cccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 000000000 00000 0001245678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.8e-22 Score=211.48 Aligned_cols=210 Identities=23% Similarity=0.319 Sum_probs=145.6
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|++.+.||+|++|.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++......++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57889999999999999999965 688999999865422 334678899999999999999999999999999999999
Q ss_pred ccCCCChhhh-----------------------------------------------------hccccceeEecCCCccc
Q 004345 572 YMPNKSLDSF-----------------------------------------------------LFDFGLARIFGGNQDQA 598 (760)
Q Consensus 572 y~~~gsL~~~-----------------------------------------------------L~DFGla~~~~~~~~~~ 598 (760)
|+++ +|..+ |+|||+++...... .
T Consensus 82 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~--~ 158 (294)
T PLN00009 82 YLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV--R 158 (294)
T ss_pred cccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc--c
Confidence 9964 55332 13778776543221 1
Q ss_pred ccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC--C-------cc
Q 004345 599 ATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN--N-------VI 668 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~-------~~ 668 (760)
......+++.|+|||.+.+. .++.++|||||||++|||+||+.|+........ ........... . +.
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 235 (294)
T PLN00009 159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE---LFKIFRILGTPNEETWPGVTSLP 235 (294)
T ss_pred ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChhhccccccch
Confidence 11234578899999998664 578999999999999999999999864322111 11010100000 0 00
Q ss_pred cccc--ccccCC----CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 669 DLVD--PLISES----GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 669 ~~~d--~~l~~~----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+... +..... ........+.+++.+|++.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 000000 00111245778999999999999999999987
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.4e-22 Score=213.63 Aligned_cols=196 Identities=24% Similarity=0.432 Sum_probs=143.5
Q ss_pred cccccccccCCceeEEEEEe-cCCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 497 FQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
|+..+.||+|+||.||+++. .+++.||+|++..... ...+.+.+|++++++++|||++++++++.++...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 66778999999999999995 4688999999864322 2345788999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+++ +|.+++ +|||++..... ..
T Consensus 107 ~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~------~~ 179 (317)
T cd06635 107 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP------AN 179 (317)
T ss_pred CCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC------cc
Confidence 975 554331 37887764321 12
Q ss_pred eeeeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 602 RLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
...+++.|+|||++. .+.++.++|||||||++|||++|+.|+...... ... ........ +..
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~---~~~---~~~~~~~~------~~~--- 244 (317)
T cd06635 180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SAL---YHIAQNES------PTL--- 244 (317)
T ss_pred cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH---HHH---HHHHhccC------CCC---
Confidence 346788999999974 456899999999999999999999997532111 000 00000000 000
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
........+.+++.+||+.+|.+||++.+|++.+--
T Consensus 245 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 245 QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 011122457788899999999999999999986543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=210.49 Aligned_cols=212 Identities=21% Similarity=0.325 Sum_probs=144.8
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeC--CeeEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EENML 568 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~l 568 (760)
.++|++.+.||+|+||.||+|... +++.||+|+++.... .....+.+|+.++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467899999999999999999964 689999999864322 2234567899999999999999999998765 46899
Q ss_pred EEeccCCCChhhh---------------------------------------------------hccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
||||+.+ +|.++ |+|||+++.......
T Consensus 86 v~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~- 163 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK- 163 (309)
T ss_pred EEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccC-
Confidence 9999975 55433 249999887643221
Q ss_pred cccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC--CCccccc---
Q 004345 598 AATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND--NNVIDLV--- 671 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--- 671 (760)
......++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ .......... ......+
T Consensus 164 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07845 164 -PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQ---LDLIIQLLGTPNESIWPGFSDL 239 (309)
T ss_pred -CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCCCChhhchhhhcc
Confidence 1122345788999999865 4588999999999999999999999864322111 1111111100 0000000
Q ss_pred ---cc-cccCC---C----CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 672 ---DP-LISES---G----FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 672 ---d~-~l~~~---~----~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.. .+... . .......+.+++.+|++.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 00000 0 00113456789999999999999999999873
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.6e-22 Score=211.03 Aligned_cols=208 Identities=23% Similarity=0.322 Sum_probs=144.0
Q ss_pred cccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
|++.+.||+|++|.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567799999999999999864 78999999987442 223457889999999999999999999999999999999999
Q ss_pred CCCChhhhh----------------------------------------------------ccccceeEecCCCcccccc
Q 004345 574 PNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 574 ~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+ ++|..++ .|||+++....... ...
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~ 157 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR--TYT 157 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc--ccC
Confidence 5 5666542 38888765432211 112
Q ss_pred eeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC--------Cccccc-
Q 004345 602 RLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN--------NVIDLV- 671 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~- 671 (760)
...++..|+|||.+... .++.++||||||+++|||++|+.||....... .+........... ...+..
T Consensus 158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07835 158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID--QLFRIFRTLGTPDEDVWPGVTSLPDYKP 235 (283)
T ss_pred ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHHhhhhhhchhhhh
Confidence 23568899999988654 57899999999999999999999986432211 1111110000000 000000
Q ss_pred ------cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 672 ------DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 672 ------d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..... .........+.+++.+|++.+|++|||+.|+++
T Consensus 236 ~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 236 TFPKWARQDLS-KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hcccccccchh-hhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00000 001111256778999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.7e-22 Score=210.83 Aligned_cols=198 Identities=24% Similarity=0.411 Sum_probs=141.4
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHH-HhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMV-ISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~-l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|++.+.||+|+||.||+++.. +++.||+|+++... .....++..|+.+ ++.++||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888999999999999999965 68999999987542 2334566777775 566789999999999999999999999
Q ss_pred ccCCCChhhh-------------------------------------------------------hccccceeEecCCCc
Q 004345 572 YMPNKSLDSF-------------------------------------------------------LFDFGLARIFGGNQD 596 (760)
Q Consensus 572 y~~~gsL~~~-------------------------------------------------------L~DFGla~~~~~~~~ 596 (760)
|++ |+|..+ |+|||+++.+....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 158 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV- 158 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc-
Confidence 997 455433 13888877543211
Q ss_pred ccccceeeeeccccCcccccc----CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAME----GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~----~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
......++..|+|||.+.. ..++.++||||||+++|||++|+.|+....... ....... .+ ..
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~-~~-----~~ 225 (283)
T cd06617 159 --AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF-----QQLKQVV-EE-----PS 225 (283)
T ss_pred --ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH-----HHHHHHH-hc-----CC
Confidence 1122457889999998864 457899999999999999999999985322110 0011111 00 01
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+.+... .....+.+++.+||+.+|++||++.+|++
T Consensus 226 ~~~~~~---~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 226 PQLPAE---KFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCCCcc---ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111110 11245778899999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.5e-22 Score=213.53 Aligned_cols=150 Identities=25% Similarity=0.373 Sum_probs=123.5
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.++||+|+||.||+++.+ +++.+|+|++.+. .......|.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999965 5778999998642 2233445889999999999999999999999999999999
Q ss_pred eccCCCChhhhh---------------------------------------------------ccccceeEecCCCcccc
Q 004345 571 EYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 571 Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
||+++|+|.++| +|||+++.+..... ..
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~-~~ 159 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQ 159 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCc-ce
Confidence 999999998763 39999876532221 12
Q ss_pred cceeeeeccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 600 TKRLVGTYGYMSPEYAM-----EGRFSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
.....||+.|||||++. ...++.++|||||||++|||++|+.||..
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 22357999999999986 34688999999999999999999999863
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.1e-22 Score=217.42 Aligned_cols=217 Identities=21% Similarity=0.322 Sum_probs=147.6
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcC-CCCccceeeeEEEeC--CeeE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVER--EENM 567 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~--~~~~ 567 (760)
.++|++.+.||+|+||.||+|... +++.+|||++... .......+.+|+.+++++ +||||+++++++... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 467888999999999999999965 5789999988542 233445688999999999 999999999998654 3679
Q ss_pred EEEeccCCCChhhhh-------------------------------------------------ccccceeEecCCCcc-
Q 004345 568 LIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQ- 597 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~- 597 (760)
+||||++ ++|..++ +|||+++.+......
T Consensus 86 lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~ 164 (337)
T cd07852 86 LVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENP 164 (337)
T ss_pred EEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccc
Confidence 9999997 4665531 389988765432211
Q ss_pred --cccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHH--------HhccCCC
Q 004345 598 --AATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAW--------KLWNDNN 666 (760)
Q Consensus 598 --~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~--------~~~~~~~ 666 (760)
.......|+..|+|||.+.. ..++.++||||||+++|||++|+.||................ ..+....
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (337)
T cd07852 165 ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPF 244 (337)
T ss_pred cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhh
Confidence 12233568899999998764 458899999999999999999999986432221110000000 0000000
Q ss_pred cccccccccc------CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 667 VIDLVDPLIS------ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 667 ~~~~~d~~l~------~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..++++.... ..........+.+++.+||+.+|++|||+.++++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 245 AATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0001110000 00000123567889999999999999999999974
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.2e-22 Score=209.56 Aligned_cols=213 Identities=20% Similarity=0.301 Sum_probs=146.8
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeC--CeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~lV 569 (760)
++|++.+.||+|+||.||+|..+ +++.+|+|.++.... .....+.+|+.++.+++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999975 578999999974422 2234678999999999999999999999887 889999
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
|||+++ +|..++ +|||+++.+.... .
T Consensus 85 ~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--~ 161 (293)
T cd07843 85 MEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL--K 161 (293)
T ss_pred ehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc--c
Confidence 999974 665432 3899888664322 1
Q ss_pred ccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHH-H-------HHHhccC-----
Q 004345 599 ATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLG-Y-------AWKLWND----- 664 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~-~-------~~~~~~~----- 664 (760)
......+++.|+|||.+.+. .++.++||||||+++|||++|+.|+...........+. . .+..+..
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (293)
T cd07843 162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAK 241 (293)
T ss_pred ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhc
Confidence 12234578899999998754 46899999999999999999999986433211110000 0 0000000
Q ss_pred -CCccccccccccCCCCHH-HHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 665 -NNVIDLVDPLISESGFKM-EIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 665 -~~~~~~~d~~l~~~~~~~-~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..........+....... ....+.+++.+||+.+|++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 242 KKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000011111111111 2345678899999999999999999975
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-22 Score=227.85 Aligned_cols=216 Identities=17% Similarity=0.210 Sum_probs=141.6
Q ss_pred HHHHHhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCC------CccceeeeEE
Q 004345 488 EELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH------RNLVRLLGCC 560 (760)
Q Consensus 488 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H------~nIv~l~g~~ 560 (760)
+++...+++|++.++||+|+||.||+|... .++.||||+++... ...+++..|+.++.+++| .+|+++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344456789999999999999999999864 57889999996432 233456667777766654 5689999988
Q ss_pred EeC-CeeEEEEeccCCCChhhhh---------------------------------------------------------
Q 004345 561 VER-EENMLIYEYMPNKSLDSFL--------------------------------------------------------- 582 (760)
Q Consensus 561 ~~~-~~~~lV~Ey~~~gsL~~~L--------------------------------------------------------- 582 (760)
..+ .+.++|||++ +++|.++|
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 764 4788999988 45554432
Q ss_pred ----------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccc
Q 004345 583 ----------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFEL 652 (760)
Q Consensus 583 ----------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~ 652 (760)
+|||++... .......+||+.|||||++.+..++.++|||||||++|||++|+.||......+..
T Consensus 280 ~~~~~~~vkl~DfG~~~~~-----~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~ 354 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDE-----RHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHL 354 (467)
T ss_pred cCCCCceEEECCCCccccC-----ccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 134433211 11122457899999999999999999999999999999999999999654322211
Q ss_pred cHHHHHHH----hcc----CCCccccc----------ccc----ccCCC---CHHHHHHHHHHHHhcccCCcCCCCCHHH
Q 004345 653 TLLGYAWK----LWN----DNNVIDLV----------DPL----ISESG---FKMEIIRCVNVGLLCVQEFVKDRPNMPT 707 (760)
Q Consensus 653 ~~~~~~~~----~~~----~~~~~~~~----------d~~----l~~~~---~~~~~~~~~~l~~~Cl~~~P~~RPt~~e 707 (760)
..+..... .+. .....++. ++. +.... .......+.+++.+||+.||++|||+.|
T Consensus 355 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e 434 (467)
T PTZ00284 355 HLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQ 434 (467)
T ss_pred HHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHH
Confidence 11111000 000 00000000 000 00000 0011245679999999999999999999
Q ss_pred HHH
Q 004345 708 VVS 710 (760)
Q Consensus 708 v~~ 710 (760)
+++
T Consensus 435 ~L~ 437 (467)
T PTZ00284 435 MTT 437 (467)
T ss_pred Hhc
Confidence 987
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.5e-22 Score=207.13 Aligned_cols=186 Identities=23% Similarity=0.313 Sum_probs=140.7
Q ss_pred cccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 503 LGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 503 lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
||.|++|.||+++.. +++.+|+|++.+.. ....+.+.+|+.++++++||||+++++.+.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999965 48899999987532 23456799999999999999999999999999999999999999999
Q ss_pred hhhh--------------------------------------------------ccccceeEecCCCcccccceeeeecc
Q 004345 579 DSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTYG 608 (760)
Q Consensus 579 ~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (760)
.++| +|||+++...... ......++..
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~ 157 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPE 157 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccccCCcC
Confidence 8763 3888887654322 1223467889
Q ss_pred ccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHH
Q 004345 609 YMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCV 688 (760)
Q Consensus 609 y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 688 (760)
|+|||.+....++.++||||||+++|||++|..|+.....+. ............ ....+......+.
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~---------~~~~~~~~~~~~~ 224 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYNDILKGNG---------KLEFPNYIDKAAK 224 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHHHhccCC---------CCCCCcccCHHHH
Confidence 999999988889999999999999999999999986433211 111111110000 0111111235678
Q ss_pred HHHHhcccCCcCCCCC
Q 004345 689 NVGLLCVQEFVKDRPN 704 (760)
Q Consensus 689 ~l~~~Cl~~~P~~RPt 704 (760)
+++.+||+.+|++||+
T Consensus 225 ~~i~~~l~~~p~~R~~ 240 (262)
T cd05572 225 DLIKQLLRRNPEERLG 240 (262)
T ss_pred HHHHHHccCChhhCcC
Confidence 8999999999999999
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.8e-22 Score=209.84 Aligned_cols=195 Identities=21% Similarity=0.307 Sum_probs=147.0
Q ss_pred ccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 500 ANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
..+||+|+||.||++.. .+++.||||++........+.+.+|+.++++++|+||+++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 36899999999999986 47889999998655445567799999999999999999999999999999999999999998
Q ss_pred hhhh-------------------------------------------------ccccceeEecCCCcccccceeeeeccc
Q 004345 579 DSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTYGY 609 (760)
Q Consensus 579 ~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~~y 609 (760)
.+++ .|||++........ ......++..|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y 182 (292)
T cd06657 105 TDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYW 182 (292)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc--cccccccCccc
Confidence 7652 38888765532211 12235688999
Q ss_pred cCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHH
Q 004345 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVN 689 (760)
Q Consensus 610 ~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 689 (760)
+|||.+....++.++||||||+++|||++|..|+....... ........ ..+.+.. .......+.+
T Consensus 183 ~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~---~~~~~~~~---------~~~~~~~--~~~~~~~l~~ 248 (292)
T cd06657 183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK---AMKMIRDN---------LPPKLKN--LHKVSPSLKG 248 (292)
T ss_pred cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhh---------CCcccCC--cccCCHHHHH
Confidence 99999988889999999999999999999999985322111 11111100 0011100 0011234667
Q ss_pred HHHhcccCCcCCCCCHHHHHH
Q 004345 690 VGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 690 l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
++.+||+.+|.+||++.++++
T Consensus 249 li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 249 FLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHhCCcccCcCHHHHhc
Confidence 888999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.87 E-value=9e-22 Score=210.07 Aligned_cols=213 Identities=23% Similarity=0.351 Sum_probs=145.8
Q ss_pred HhccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC----
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE---- 564 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~---- 564 (760)
...++|++.+.||+|+||.||+|..+ +++.||+|+++... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34578999999999999999999975 57899999987542 233456789999999999999999999987655
Q ss_pred ------eeEEEEeccCCCChhhh---------------------------------------------------hccccc
Q 004345 565 ------ENMLIYEYMPNKSLDSF---------------------------------------------------LFDFGL 587 (760)
Q Consensus 565 ------~~~lV~Ey~~~gsL~~~---------------------------------------------------L~DFGl 587 (760)
..++|+||+++ +|..+ |+|||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccc
Confidence 78999999986 33221 248888
Q ss_pred eeEecCCCcccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC-
Q 004345 588 ARIFGGNQDQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN- 665 (760)
Q Consensus 588 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~- 665 (760)
++.+..... .......++..|+|||.+.. ..++.++|||||||+++||++|+.|+....... ......+.....
T Consensus 163 ~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~ 238 (302)
T cd07864 163 ARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA---QLELISRLCGSPC 238 (302)
T ss_pred cccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCC
Confidence 876543221 11122356788999998864 457899999999999999999999986432211 111111111000
Q ss_pred --Ccccc--------ccc------cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 666 --NVIDL--------VDP------LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 666 --~~~~~--------~d~------~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...++ .++ .+.... ......+.+++..||+.+|.+||++.+|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 239 PAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hhhcccccccccccccccccccccchhhhc-CCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000 000 000000 011346788999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=214.86 Aligned_cols=215 Identities=20% Similarity=0.289 Sum_probs=149.3
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeC------
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER------ 563 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~------ 563 (760)
..++|+..+.||+|+||.||++.. .+++.||||++... .....+++.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 347899999999999999999995 47889999998643 223445788999999999999999999998644
Q ss_pred CeeEEEEeccCCCChhhh------------------------------------------------hccccceeEecCCC
Q 004345 564 EENMLIYEYMPNKSLDSF------------------------------------------------LFDFGLARIFGGNQ 595 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~------------------------------------------------L~DFGla~~~~~~~ 595 (760)
...++||||+.+ +|... |+|||+++......
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 172 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 172 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC
Confidence 346999999965 54432 24999998654321
Q ss_pred cccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHH---------HH-------HH
Q 004345 596 DQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL---------GY-------AW 659 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~---------~~-------~~ 659 (760)
......++..|+|||.+....++.++|||||||++|||++|+.||...........+ .+ ..
T Consensus 173 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
T cd07850 173 ---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR 249 (353)
T ss_pred ---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence 122346788999999999999999999999999999999999998643211100000 00 00
Q ss_pred HhccCC------Cccccccccc----cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 660 KLWNDN------NVIDLVDPLI----SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 660 ~~~~~~------~~~~~~d~~l----~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
...... ...+.....+ ...........+.+++.+|++.||++|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000 0001111100 000011234567889999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.5e-22 Score=207.84 Aligned_cols=212 Identities=24% Similarity=0.351 Sum_probs=145.0
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
+|++.++||+|++|.||+|+.. +++.||||+++.... ...+.+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999975 688999999875432 33567889999999999999999999999999999999999
Q ss_pred CCCChhhhh-----------------------------------------------------ccccceeEecCCCccccc
Q 004345 574 PNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 574 ~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
++ +|.+++ +|||+++.+.... ...
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--~~~ 157 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV--NTF 157 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--ccc
Confidence 85 555432 3777765442211 111
Q ss_pred ceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH--------HHhccC-CCcccc
Q 004345 601 KRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA--------WKLWND-NNVIDL 670 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~ 670 (760)
....++..|++||.+... .++.++|||||||++|||++|+.|+......+........ ++.+.. ......
T Consensus 158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07836 158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPT 237 (284)
T ss_pred ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccc
Confidence 234568899999988654 5789999999999999999999998643322111100000 000000 000000
Q ss_pred ccccc---cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 671 VDPLI---SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 671 ~d~~l---~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..... .....+.....+.+++.+|++.||.+||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 238 FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 00001112345678999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.9e-22 Score=216.35 Aligned_cols=213 Identities=21% Similarity=0.316 Sum_probs=146.0
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC------
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE------ 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~------ 564 (760)
.++|.+.+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 37899999999999999999995 468999999987532 233456889999999999999999999987543
Q ss_pred eeEEEEeccCCCChhhh------------------------------------------------hccccceeEecCCCc
Q 004345 565 ENMLIYEYMPNKSLDSF------------------------------------------------LFDFGLARIFGGNQD 596 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~------------------------------------------------L~DFGla~~~~~~~~ 596 (760)
..++|+||+.. +|..+ |+|||+++....
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~--- 169 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA--- 169 (342)
T ss_pred eEEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC---
Confidence 46899999864 45432 248888775421
Q ss_pred ccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHh-----------ccC
Q 004345 597 QAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL-----------WND 664 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~-----------~~~ 664 (760)
......++..|+|||.+.. ..++.++|||||||++|||++|+.||....... ........ ...
T Consensus 170 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T cd07879 170 --EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD---QLTQILKVTGVPGPEFVQKLED 244 (342)
T ss_pred --CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCHHHHHHhcc
Confidence 1123467889999999876 468899999999999999999999986432111 11111100 000
Q ss_pred CCcccccc--cc-ccCCC---CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH--Hhcc
Q 004345 665 NNVIDLVD--PL-ISESG---FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM--LNSE 715 (760)
Q Consensus 665 ~~~~~~~d--~~-l~~~~---~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~--L~~~ 715 (760)
......++ +. ..... .+.....+.+++.+||+.||++||++.+++.. ++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 245 KAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred cchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 00000000 00 00000 00112457789999999999999999999853 5544
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=207.99 Aligned_cols=210 Identities=22% Similarity=0.301 Sum_probs=142.4
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCe-----
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREE----- 565 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~----- 565 (760)
++|++.+.||+|+||.||+|... +++.||||.++... ......+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999964 68899999886442 223467889999999995 6999999999987665
Q ss_pred eEEEEeccCCCChhhhh--------------------------------------------------------cccccee
Q 004345 566 NMLIYEYMPNKSLDSFL--------------------------------------------------------FDFGLAR 589 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L--------------------------------------------------------~DFGla~ 589 (760)
.++||||+++ +|..++ +|||+++
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence 7999999985 554331 3788776
Q ss_pred EecCCCcccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCC--
Q 004345 590 IFGGNQDQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN-- 666 (760)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 666 (760)
.+.... .......+++.|+|||++.+ ..++.++||||||+++|||++|..||....... .+.. .........
T Consensus 160 ~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~--~~~~-~~~~~~~~~~~ 234 (295)
T cd07837 160 AFSIPV--KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ--QLLH-IFKLLGTPTEQ 234 (295)
T ss_pred ecCCCc--cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHH-HHHHhCCCChh
Confidence 543211 11122356788999998865 457999999999999999999999886422111 0111 001100000
Q ss_pred ----cccccc----ccccC----CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 667 ----VIDLVD----PLISE----SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 667 ----~~~~~d----~~l~~----~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..+..+ +.... ...+.....+.+++.+||+.||.+||++.|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000 00000 000112355778999999999999999999875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=202.51 Aligned_cols=197 Identities=23% Similarity=0.410 Sum_probs=151.0
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|++.+.||+|+||.||++... +++.+|+|++..... ...+.+.+|++++++++|+|++++++.+..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4788899999999999999965 688999999875432 4566799999999999999999999999999999999999
Q ss_pred cCCCChhhhh------------------------------------------------------ccccceeEecCCCccc
Q 004345 573 MPNKSLDSFL------------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 573 ~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
+++++|.+++ +|||++....... .
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~ 158 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV--D 158 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc--c
Confidence 9999886542 3888877654332 1
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
......|++.|+|||......++.++||||+|++++||++|+.|+..... ........ ...... +.
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~-~~~~~~-----~~-- 224 (258)
T cd08215 159 LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL------LELALKIL-KGQYPP-----IP-- 224 (258)
T ss_pred eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH------HHHHHHHh-cCCCCC-----CC--
Confidence 22235688899999999888899999999999999999999999853321 11111111 111111 11
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......+.+++.+||+.+|++|||+.++++
T Consensus 225 --~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 225 --SQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 112245778899999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-21 Score=205.94 Aligned_cols=207 Identities=19% Similarity=0.271 Sum_probs=142.4
Q ss_pred cccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCC-CCccceeeeEEEeC--CeeEEEEe
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVER--EENMLIYE 571 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~--~~~~lV~E 571 (760)
|++.++||+|+||.||+|... +++.||+|+++... ........+|+.++.++. |+||+++++++.++ +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567789999999999999954 68899999987542 223345568999999985 99999999999987 88999999
Q ss_pred ccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
|+++ +|.+++ +|||+++.+..... ..
T Consensus 81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~---~~ 156 (282)
T cd07831 81 LMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPP---YT 156 (282)
T ss_pred cCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCC---cC
Confidence 9974 554431 37887776532221 12
Q ss_pred eeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhc-----------cCCCccc
Q 004345 602 RLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLW-----------NDNNVID 669 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 669 (760)
...++..|+|||.+.. ..++.++|||||||++|||++|..||...... .......... .......
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL---DQIAKIHDVLGTPDAEVLKKFRKSRHMN 233 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH---HHHHHHHHHcCCCCHHHHHhhccccccc
Confidence 2457889999998754 55789999999999999999999998643221 1111111111 0001011
Q ss_pred cccccccCC----CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 670 LVDPLISES----GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 670 ~~d~~l~~~----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+..... ........+.+++.+||+.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000000 01122467889999999999999999999976
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.9e-22 Score=215.71 Aligned_cols=215 Identities=19% Similarity=0.238 Sum_probs=145.6
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeC----------
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER---------- 563 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~---------- 563 (760)
.+|++.+.||+|+||.||+|.. .+++.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 6799999999999999999986 46889999998766556667899999999999999999999876543
Q ss_pred ----CeeEEEEeccCCCChhhhh--------------------------------------------------cccccee
Q 004345 564 ----EENMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLAR 589 (760)
Q Consensus 564 ----~~~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~ 589 (760)
...++|+||++ ++|..++ .|||+++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~ 163 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLAR 163 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccce
Confidence 35789999997 4665431 3888887
Q ss_pred EecCCCccc-ccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC---
Q 004345 590 IFGGNQDQA-ATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND--- 664 (760)
Q Consensus 590 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~--- 664 (760)
.+....... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||.....................
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T cd07854 164 IVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDR 243 (342)
T ss_pred ecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence 653221111 1122357889999998754 56889999999999999999999998643321111000000000000
Q ss_pred CCccccccc-----cccCCCC-----HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 665 NNVIDLVDP-----LISESGF-----KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 665 ~~~~~~~d~-----~l~~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......... ......+ ......+.+++.+|++.||++|||+.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 244 NELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred hhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000000000 0000000 011245778999999999999999999986
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-21 Score=206.51 Aligned_cols=208 Identities=22% Similarity=0.335 Sum_probs=147.6
Q ss_pred cccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
|++.+.||+|++|.||++... +++.+++|++..... .....+.+|+.++++++|+||+++++++..+...++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 556789999999999999964 688999999875432 24567889999999999999999999999999999999999
Q ss_pred CCCChhhhh---------------------------------------------------ccccceeEecCCCcccccce
Q 004345 574 PNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 574 ~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
++ +|.+++ +|||.+....... .....
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~~~~~ 157 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RPYTH 157 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--ccccC
Confidence 75 655432 3888887664332 11122
Q ss_pred eeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC---Ccccccc------
Q 004345 603 LVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN---NVIDLVD------ 672 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d------ 672 (760)
..++..|+|||.+... .++.++||||||+++|||++|+.||......+. ........... ......+
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ---LFKIFRTLGTPDPEVWPKFTSLARNYK 234 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCchHhcccchhhhhhhh
Confidence 4577889999998876 789999999999999999999998854332111 11111110000 0000000
Q ss_pred ---c----cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 ---P----LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ---~----~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+ .............+.+++..||+.||.+||++.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0 0000011122457889999999999999999999986
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-21 Score=210.32 Aligned_cols=217 Identities=20% Similarity=0.284 Sum_probs=148.7
Q ss_pred HHHHhccccccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEe-CC
Q 004345 489 ELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE-RE 564 (760)
Q Consensus 489 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~-~~ 564 (760)
++...+++|++.+.||+|+||.||++... +++.||||++.+. .....+.+.+|++++.+++||||+++++++.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34456789999999999999999999854 7899999988643 22345678899999999999999999999876 55
Q ss_pred eeEEEEeccCCCChhhhh-------------------------------------------------ccccceeEecCCC
Q 004345 565 ENMLIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~ 595 (760)
..++|+||+. ++|..++ +|||+++....
T Consensus 84 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~-- 160 (328)
T cd07856 84 DIYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP-- 160 (328)
T ss_pred cEEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC--
Confidence 7899999984 5665442 38887764321
Q ss_pred cccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccH-HHH-------HHHhccCCC
Q 004345 596 DQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTL-LGY-------AWKLWNDNN 666 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~-~~~-------~~~~~~~~~ 666 (760)
......++..|+|||.+.. ..++.++||||||+++|||++|+.||........... ... .........
T Consensus 161 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (328)
T cd07856 161 ---QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSEN 237 (328)
T ss_pred ---CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchh
Confidence 1122456889999999866 5689999999999999999999999864322110000 000 000000011
Q ss_pred cccccccc-ccCCCCHH-----HHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 667 VIDLVDPL-ISESGFKM-----EIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 667 ~~~~~d~~-l~~~~~~~-----~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+.+... .....+.. ....+.+++.+|++.+|++|||+.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 238 TLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11111000 00011111 12567889999999999999999999774
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.8e-22 Score=204.99 Aligned_cols=197 Identities=25% Similarity=0.354 Sum_probs=144.3
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEeccc-----CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA-----SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
+|.+.++||+|+||.||++... .+..+++|.++.. ......++.+|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 5788899999999999999854 3445666655432 122344677899999999999999999999999999999
Q ss_pred EeccCCCChhhhh-----------------------------------------------------ccccceeEecCCCc
Q 004345 570 YEYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 570 ~Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+||+++++|..++ +|||+++.......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~ 160 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCD 160 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCcc
Confidence 9999999987542 38888776543222
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
......++..|+|||......++.++||||||+++|||++|..|+.... ......... .+. .+.
T Consensus 161 --~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~~~~~~~~~-~~~-----~~~-- 224 (260)
T cd08222 161 --LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN------FLSVVLRIV-EGP-----TPS-- 224 (260)
T ss_pred --cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHH-cCC-----CCC--
Confidence 1223457889999999988889999999999999999999999985221 111111111 111 111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+......+.+++.+||+.+|++||++.++++
T Consensus 225 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 225 --LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred --CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 11223356778899999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-21 Score=201.18 Aligned_cols=197 Identities=26% Similarity=0.416 Sum_probs=150.4
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|++.+.||+|++|.||+++.. +++.+++|.+..... ...+.+.+|++++.+++|+|++++++++..++..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999865 678999999976543 4556899999999999999999999999999999999999
Q ss_pred cCCCChhhhh--------------------------------------------------ccccceeEecCCCcccccce
Q 004345 573 MPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 573 ~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
+++++|.+++ .|||++......... ...
T Consensus 81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--~~~ 158 (254)
T cd06627 81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD--DAS 158 (254)
T ss_pred CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc--ccc
Confidence 9999997753 388888766432221 223
Q ss_pred eeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHH
Q 004345 603 LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 682 (760)
..++..|+|||......++.++||||+|++++||++|+.|+...... . ..+... .... +.+ +..
T Consensus 159 ~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~-----~-~~~~~~-~~~~-----~~~----~~~ 222 (254)
T cd06627 159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM-----A-ALFRIV-QDDH-----PPL----PEG 222 (254)
T ss_pred cccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH-----H-HHHHHh-ccCC-----CCC----CCC
Confidence 46788999999998888899999999999999999999998532211 0 011110 0100 011 111
Q ss_pred HHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 683 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+.+++.+|++.+|++|||+.+++.
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 223 ISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1346678889999999999999999875
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-22 Score=217.41 Aligned_cols=190 Identities=20% Similarity=0.254 Sum_probs=135.7
Q ss_pred cccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcC---CCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 503 LGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNL---QHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 503 lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l---~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
||+|+||.||+|+.. +++.||||++.+.. ......+..|..++.++ +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999964 68899999986432 22334566777777665 699999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
|+|..+| +|||+++...... .......|
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~g 158 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KTTNTFCG 158 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--CCccCccC
Confidence 9986542 4999987542221 12234579
Q ss_pred eccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHH
Q 004345 606 TYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684 (760)
Q Consensus 606 t~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 684 (760)
|+.|||||++... .++.++|||||||++|||++|+.||...... . .......+.. .+.... ..
T Consensus 159 t~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~------~-~~~~i~~~~~------~~~~~~---~~ 222 (330)
T cd05586 159 TTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ------Q-MYRNIAFGKV------RFPKNV---LS 222 (330)
T ss_pred CccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH------H-HHHHHHcCCC------CCCCcc---CC
Confidence 9999999998755 4899999999999999999999998532211 1 1111111110 011111 12
Q ss_pred HHHHHHHHhcccCCcCCCCC----HHHHHH
Q 004345 685 IRCVNVGLLCVQEFVKDRPN----MPTVVS 710 (760)
Q Consensus 685 ~~~~~l~~~Cl~~~P~~RPt----~~ev~~ 710 (760)
..+.+++.+||+.||.+||+ +.++++
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 34567888999999999985 555544
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-22 Score=218.28 Aligned_cols=193 Identities=23% Similarity=0.364 Sum_probs=147.5
Q ss_pred ccccccccCCceeEEEEEec-CCcEEEEEEec--c--cCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe--eEEEE
Q 004345 498 QLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLS--K--ASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE--NMLIY 570 (760)
Q Consensus 498 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~--~--~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~--~~lV~ 570 (760)
+..++||+|+|-+||||.+. +|..||--.++ + ......++|..|+.+|+.|+|||||+++.++.+... .-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 34478999999999999964 56677643332 1 234456899999999999999999999999987665 67999
Q ss_pred eccCCCChhhhh-----------------------------------------------------ccccceeEecCCCcc
Q 004345 571 EYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 571 Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
|.|..|+|..|+ .|+|||.+....
T Consensus 123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s--- 199 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS--- 199 (632)
T ss_pred ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc---
Confidence 999999999883 299999876422
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
....++|||.|||||... ..|++.+||||||+.++||+|+..|+..+.. ...+++.+..|...+.+...
T Consensus 200 -~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n------~AQIYKKV~SGiKP~sl~kV--- 268 (632)
T KOG0584|consen 200 -HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN------PAQIYKKVTSGIKPAALSKV--- 268 (632)
T ss_pred -ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC------HHHHHHHHHcCCCHHHhhcc---
Confidence 233479999999999986 7899999999999999999999999975433 23344444444332222211
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. -..+.+++.+|+.. .++|||+.|+++
T Consensus 269 --~---dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 269 --K---DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred --C---CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 1 13456678899998 899999999987
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.4e-22 Score=214.21 Aligned_cols=216 Identities=16% Similarity=0.253 Sum_probs=148.0
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEe----CCeeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVE----REENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~----~~~~~ 567 (760)
.+|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 6788999999999999999995 468999999987542 2345678899999999999999999998763 34679
Q ss_pred EEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcc
Q 004345 568 LIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
+|+||+. ++|..++ +|||+++........
T Consensus 85 lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 163 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE 163 (334)
T ss_pred EEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence 9999996 4665542 499998765432211
Q ss_pred --cccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH--------HHhccCCC
Q 004345 598 --AATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA--------WKLWNDNN 666 (760)
Q Consensus 598 --~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~--------~~~~~~~~ 666 (760)
.......++..|+|||.+.. ..++.++|||||||++|||++|+.||............... ........
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 243 (334)
T cd07855 164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDR 243 (334)
T ss_pred CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhh
Confidence 11123468899999999865 45899999999999999999999998543221111000000 00000000
Q ss_pred ccccccccc-cCCCC-----HHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 667 VIDLVDPLI-SESGF-----KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 667 ~~~~~d~~l-~~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+..+..- ..... ......+.+++.+|++.+|++||++.+++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 244 VRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 111110000 00000 1124568889999999999999999998874
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-21 Score=209.71 Aligned_cols=213 Identities=21% Similarity=0.290 Sum_probs=145.3
Q ss_pred ccccc-ccccccCCceeEEEEEec-CCcEEEEEEecccCccc--------------hHhHHHHHHHHhcCCCCccceeee
Q 004345 495 NNFQL-ANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQG--------------QEEFMNEVMVISNLQHRNLVRLLG 558 (760)
Q Consensus 495 ~~~~~-~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~--------------~~~f~~E~~~l~~l~H~nIv~l~g 558 (760)
++|.. .+.||+|+||.||+|... +++.||||+++...... ...+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45653 467999999999999954 68899999986432211 125789999999999999999999
Q ss_pred EEEeCCeeEEEEeccCCCChhhhh--------------------------------------------------ccccce
Q 004345 559 CCVEREENMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLA 588 (760)
Q Consensus 559 ~~~~~~~~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla 588 (760)
++..++..++||||++ |+|.+++ .|||++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~ 166 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLA 166 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccce
Confidence 9999999999999997 5666542 389988
Q ss_pred eEecCCC------------cccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHH
Q 004345 589 RIFGGNQ------------DQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL 655 (760)
Q Consensus 589 ~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~ 655 (760)
+...... .........++..|+|||.+.+. .++.++||||||+++|||++|+.|+......+ ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~---~~ 243 (335)
T PTZ00024 167 RRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID---QL 243 (335)
T ss_pred eecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HH
Confidence 7654111 01111123467889999998754 47899999999999999999999986433221 11
Q ss_pred HHHHHhccCCC---ccc--------cccccccC---CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 656 GYAWKLWNDNN---VID--------LVDPLISE---SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 656 ~~~~~~~~~~~---~~~--------~~d~~l~~---~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
........... ..+ ........ .........+.+++.+|++.+|++||++.|++..
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 244 GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 11111111000 000 00000000 0001123567789999999999999999999873
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-21 Score=201.70 Aligned_cols=194 Identities=19% Similarity=0.211 Sum_probs=139.1
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEecccCc---cchHhHHHHHHHH-hcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG---QGQEEFMNEVMVI-SNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~f~~E~~~l-~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
+.||+|+||.||+|... +++.||||.+.+... .....+..|..++ ...+|+||+++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57999999999999864 688999999865321 2223455565544 455899999999999999999999999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
++|..++ +|||+++.... .....+
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~~~~~~ 155 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------NKKFVG 155 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc------cccCCC
Confidence 9998763 37887765422 123457
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
+..|+|||.+.+..++.++||||||+++|||++|..|+...... .. ......+... .... .......
T Consensus 156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~----~~~~~~~~~~--~~~~----~~~~~~~ 222 (260)
T cd05611 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD---AV----FDNILSRRIN--WPEE----VKEFCSP 222 (260)
T ss_pred CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH---HH----HHHHHhcccC--CCCc----ccccCCH
Confidence 88999999998888999999999999999999999998532211 11 1111111000 0000 0111235
Q ss_pred HHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 686 RCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
.+.+++.+||+.+|++||++.++.+.|.
T Consensus 223 ~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 223 EAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred HHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 6778999999999999999887766653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-21 Score=202.20 Aligned_cols=200 Identities=24% Similarity=0.343 Sum_probs=145.6
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEeccc-----CccchHhHHHHHHHHhcCCCCccceeeeEEEeC--Cee
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA-----SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EEN 566 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~ 566 (760)
.+|++.+.||+|+||.||+|.. .+++.||+|.+... ..+....+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999985 46889999987532 123345789999999999999999999998764 457
Q ss_pred EEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCc
Q 004345 567 MLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~ 596 (760)
++|+||+++++|.+++ .|||+++.......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence 8999999999987652 38998876532111
Q ss_pred -ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 -QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 -~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
........++..|+|||.+....++.++|||||||+++||++|+.||...... ....+..... .
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~---------~ 226 (264)
T cd06653 162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM------AAIFKIATQP---------T 226 (264)
T ss_pred cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH------HHHHHHHcCC---------C
Confidence 11112346889999999999888999999999999999999999998532111 1111111010 0
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+......+.+++.+|++ +|..||++.+++.
T Consensus 227 ~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 227 KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 011122223557788889999 5799999998765
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-21 Score=208.47 Aligned_cols=196 Identities=26% Similarity=0.424 Sum_probs=143.4
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
+.|+..+.||+|+||.||+|+.. +++.+|+|.+... .....+++.+|++++++++|+|++++++++......++|+
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34667789999999999999964 6788999988642 2233457889999999999999999999999999999999
Q ss_pred eccCCCChhhhh---------------------------------------------------ccccceeEecCCCcccc
Q 004345 571 EYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 571 Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
||+. |+|..++ +|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----- 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----- 168 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc-----
Confidence 9997 4554431 388887765321
Q ss_pred cceeeeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 600 TKRLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
....++..|+|||.+. ...++.++|||||||++|||++|+.|+....... ..... ..+.. +...
T Consensus 169 -~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~-~~~~~-----~~~~ 235 (308)
T cd06634 169 -NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHI-AQNES-----PALQ 235 (308)
T ss_pred -ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH------HHHHH-hhcCC-----CCcC
Confidence 2345788999999975 3568899999999999999999999975322110 00000 01110 0100
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHH
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 712 (760)
.......+.+++.+||+.+|++||++.+|++..
T Consensus 236 ---~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 236 ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred ---cccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 111234567888999999999999999998753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-21 Score=212.91 Aligned_cols=197 Identities=20% Similarity=0.330 Sum_probs=157.1
Q ss_pred HhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
.....|.+.++||+|.|+.|.+++. .++..||||.+++.. ....+.+.+|+++|+.|+|||||+++.+.+....+|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 3456789999999999999999995 468999999998653 2334568999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCccc
Q 004345 569 IYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 569 V~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||||+.+|.+++|| +|||++..+... .
T Consensus 133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~---~ 209 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG---L 209 (596)
T ss_pred EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc---c
Confidence 99999999999884 499999887532 2
Q ss_pred ccceeeeeccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRF-SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
.....+|++.|.|||+..+..| .+++|+||+|++||-|+.|..||+... +.++-++.+.+
T Consensus 210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~-------------------lk~Lr~rvl~g 270 (596)
T KOG0586|consen 210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN-------------------LKELRPRVLRG 270 (596)
T ss_pred cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc-------------------cccccchheee
Confidence 3445799999999999998876 489999999999999999999996311 11111111111
Q ss_pred C--CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 S--GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~--~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. .+......|-+++.+.+-.+|.+|+++++|.+
T Consensus 271 k~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 271 KYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred eecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 1 11222345777888888999999999999977
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-21 Score=205.40 Aligned_cols=205 Identities=24% Similarity=0.326 Sum_probs=149.6
Q ss_pred ccccccccccCCceeEEEEEe----cCCcEEEEEEecccC----ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCee
Q 004345 496 NFQLANKLGQGGFGPVYKGKL----QDGQEIAVKRLSKAS----GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~ 566 (760)
+|++.+.||+|++|.||+++. .+++.||||.+++.. ....+.+.+|+.++.++ +||||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 377889999999999999984 356889999986432 23345788999999999 599999999999999999
Q ss_pred EEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCc
Q 004345 567 MLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~ 596 (760)
++||||+++++|..++ +|||+++.+.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE 160 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence 9999999999987652 38888876543321
Q ss_pred ccccceeeeeccccCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGR--FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
. ......|+..|+|||.+.... .+.++||||||++++||++|..|+...... ............. .+.
T Consensus 161 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~-------~~~ 230 (288)
T cd05583 161 E-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ--NSQSEISRRILKS-------KPP 230 (288)
T ss_pred c-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc--chHHHHHHHHHcc-------CCC
Confidence 1 122346789999999987665 788999999999999999999998532211 1111111111110 011
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
... .....+.+++.+||+.+|++|||+.++.+.|+-
T Consensus 231 ~~~----~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 231 FPK----TMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred CCc----ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 111 112356778889999999999999999887754
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=204.57 Aligned_cols=197 Identities=22% Similarity=0.308 Sum_probs=146.4
Q ss_pred cccCCceeEEEEEec-CCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 503 LGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 503 lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
||+|+||.||+++.. +++.+++|.+..... ...+.+.+|++++++++||||+++++.+..+...++|+||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 489999999865432 3456789999999999999999999999999999999999999998
Q ss_pred hhhh--------------------------------------------------ccccceeEecCCCc------ccccce
Q 004345 579 DSFL--------------------------------------------------FDFGLARIFGGNQD------QAATKR 602 (760)
Q Consensus 579 ~~~L--------------------------------------------------~DFGla~~~~~~~~------~~~~~~ 602 (760)
.+++ +|||++........ ......
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 160 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR 160 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccC
Confidence 7653 38888775432211 112233
Q ss_pred eeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHH
Q 004345 603 LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 682 (760)
..++..|+|||.......+.++||||||++++||++|+.|+.....+ ...... ..+.. .. .. ...
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~-~~~~~----~~--~~--~~~ 225 (265)
T cd05579 161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE------EIFQNI-LNGKI----EW--PE--DVE 225 (265)
T ss_pred cccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH------HHHHHH-hcCCc----CC--Cc--ccc
Confidence 56788999999998888999999999999999999999998643221 111111 11110 00 00 000
Q ss_pred HHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 683 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
....+.+++.+|++.+|.+|||+.+|.+.|+.
T Consensus 226 ~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 226 VSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred CCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 13567788999999999999999777776643
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-21 Score=208.02 Aligned_cols=200 Identities=21% Similarity=0.382 Sum_probs=142.6
Q ss_pred cccccccccccCCceeEEEEEecC-CcEEEEEEecccC-ccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|++.+.||+|+||.||+|..+. ++.||||.++... .....++.+|+.++.++. ||||+++++++.+....++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 567888999999999999999764 8899999997543 234456778888777775 9999999999999999999999
Q ss_pred ccCCCChhhh----------------------------------------------------hccccceeEecCCCcccc
Q 004345 572 YMPNKSLDSF----------------------------------------------------LFDFGLARIFGGNQDQAA 599 (760)
Q Consensus 572 y~~~gsL~~~----------------------------------------------------L~DFGla~~~~~~~~~~~ 599 (760)
|+++ +|..+ |.|||++..+......
T Consensus 95 ~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~-- 171 (296)
T cd06618 95 LMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK-- 171 (296)
T ss_pred ccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcc--
Confidence 9864 33221 2388887655322211
Q ss_pred cceeeeeccccCccccccCC----CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 600 TKRLVGTYGYMSPEYAMEGR----FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~----~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
....++..|+|||.+.... ++.++||||||+++|||++|+.|+.....+. .......... .. .+
T Consensus 172 -~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~~~-~~-----~~ 239 (296)
T cd06618 172 -TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-----EVLTKILQEE-PP-----SL 239 (296)
T ss_pred -cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-----HHHHHHhcCC-CC-----CC
Confidence 2235778999999987553 8899999999999999999999985322110 1111111111 00 00
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
... ......+.+++.+||+.||++||++.++++.
T Consensus 240 ~~~--~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 240 PPN--EGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCC--CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 0123457888899999999999999999874
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-21 Score=209.23 Aligned_cols=215 Identities=22% Similarity=0.317 Sum_probs=143.5
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeCC------
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVERE------ 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~------ 564 (760)
.++|++.++||+|+||.||+|+.. +++.+|||++..... .....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999964 688999999864322 22346789999999999999999999876543
Q ss_pred --eeEEEEeccCCCChhhh---------------------------------------------------hccccceeEe
Q 004345 565 --ENMLIYEYMPNKSLDSF---------------------------------------------------LFDFGLARIF 591 (760)
Q Consensus 565 --~~~lV~Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~ 591 (760)
..++|+||+.. +|... |+|||+++..
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 165 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY 165 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence 46999999875 33221 2489988765
Q ss_pred cCCCcc---------cccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHh
Q 004345 592 GGNQDQ---------AATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL 661 (760)
Q Consensus 592 ~~~~~~---------~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~ 661 (760)
...... .......+++.|+|||.+.+. .++.++|||||||++|||++|+.|+..................
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~ 245 (311)
T cd07866 166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGT 245 (311)
T ss_pred cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 332211 111234678889999988654 5889999999999999999999998643222111110000000
Q ss_pred ccCC------Ccccc--------ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 662 WNDN------NVIDL--------VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 662 ~~~~------~~~~~--------~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..+. .+... ..+.+... .......+.+++.+|++.||++|||+.|++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 246 PTEETWPGWRSLPGCEGVHSFTNYPRTLEER-FGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CChhhchhhhhcccccccccCCCCCccHHHH-cccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000 00000 00011000 0111256788999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-21 Score=205.79 Aligned_cols=199 Identities=23% Similarity=0.313 Sum_probs=150.6
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV 569 (760)
++|++.+.||+|+||.||+++.. +++.||+|++.+. .....+.+.+|+.++.+++ ||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999965 7899999998753 2233467889999999998 99999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcc--
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQ-- 597 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~-- 597 (760)
|||+++++|.+++ +|||++.........
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~ 160 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES 160 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence 9999999997663 388988765432210
Q ss_pred ----------------cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHh
Q 004345 598 ----------------AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL 661 (760)
Q Consensus 598 ----------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~ 661 (760)
.......++..|+|||......++.++||||||++++|+++|+.|+...... . . ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~-~---~~~~ 234 (280)
T cd05581 161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY--L-T---FQKI 234 (280)
T ss_pred CCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH--H-H---HHHH
Confidence 1222345788999999998888999999999999999999999998633211 0 0 0111
Q ss_pred ccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCH----HHHHH
Q 004345 662 WNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNM----PTVVS 710 (760)
Q Consensus 662 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~----~ev~~ 710 (760)
. . .....+....+.+.+++.+||+.+|++||++ .++++
T Consensus 235 ~-~----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 235 L-K----------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred H-h----------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 0 0 0001111123567889999999999999999 66654
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-21 Score=204.78 Aligned_cols=210 Identities=21% Similarity=0.286 Sum_probs=144.4
Q ss_pred cccccccccCCceeEEEEEec-CCcEEEEEEecccCc-cchHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEEEEecc
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
|++.+.||+|++|.||+|+.. +++.|+||++..... .......+|+..+.+++ |+||+++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567799999999999999975 578899999875432 23335567999999999 999999999999999999999999
Q ss_pred CCCChhhhh----------------------------------------------------ccccceeEecCCCcccccc
Q 004345 574 PNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 574 ~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+|+|.+++ +|||+++....... ..
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~ 156 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP---YT 156 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC---cC
Confidence 77776542 38888876532221 12
Q ss_pred eeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccH-HH---------HHHHhccCCCcccc
Q 004345 602 RLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTL-LG---------YAWKLWNDNNVIDL 670 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~ 670 (760)
...++..|+|||.+.. ..++.++||||||++++||++|+.|+........... .. |.............
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd07830 157 DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR 236 (283)
T ss_pred CCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccc
Confidence 3457889999998854 4588999999999999999999988854322111000 00 00000000000000
Q ss_pred cccccc---CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 671 VDPLIS---ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 671 ~d~~l~---~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+..... ..........+.+++.+||+.+|++|||+.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000 0000111356889999999999999999999976
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-21 Score=207.18 Aligned_cols=193 Identities=23% Similarity=0.415 Sum_probs=139.8
Q ss_pred cccccccccCCceeEEEEEe-cCCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 497 FQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
|...++||+|+||.||+|+. .+++.|++|++..... ...+.+.+|++++++++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 55568899999999999986 4688999999864322 2335688999999999999999999999999999999999
Q ss_pred cCCCChhhh---------------------------------------------------hccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
+.+ +|.++ |+|||++.... ...
T Consensus 103 ~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~------~~~ 175 (313)
T cd06633 103 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS------PAN 175 (313)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC------CCC
Confidence 964 44332 13777765321 112
Q ss_pred eeeeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 602 RLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
...|+..|+|||++. ...++.++|||||||++|||++|..|+...... .. ....... .... ...
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~---~~---~~~~~~~-~~~~-----~~~- 242 (313)
T cd06633 176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SA---LYHIAQN-DSPT-----LQS- 242 (313)
T ss_pred CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---HH---HHHHHhc-CCCC-----CCc-
Confidence 356888999999984 456889999999999999999999997532211 11 1111100 0000 000
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
......+.+++.+||+.+|.+||++.+++..
T Consensus 243 --~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 243 --NEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0112346778889999999999999999863
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.4e-23 Score=237.29 Aligned_cols=203 Identities=28% Similarity=0.375 Sum_probs=154.6
Q ss_pred HhccccccccccccCCceeEEEEE-ecCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
..+-+++-...||.|.||.||-|. .++|...|+|-++.. .....+...+|..++..|+|||||+++|+-.+.+..+|
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 345567788999999999999998 567899999988643 23445678899999999999999999999999999999
Q ss_pred EEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcc-
Q 004345 569 IYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQ- 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~- 597 (760)
.||||++|+|.+.+ .|||.|..+..+...
T Consensus 1312 FMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred HHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcC
Confidence 99999999998863 299999987654311
Q ss_pred -cccceeeeeccccCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHH-hccCCCcccccc
Q 004345 598 -AATKRLVGTYGYMSPEYAMEGR---FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWK-LWNDNNVIDLVD 672 (760)
Q Consensus 598 -~~~~~~~gt~~y~aPE~~~~~~---~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d 672 (760)
.......||+.|||||++.+.. ..-+.||||+||+++||+||++||...+.+ |+.. .+..+..
T Consensus 1392 ~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~aIMy~V~~gh~----- 1459 (1509)
T KOG4645|consen 1392 PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WAIMYHVAAGHK----- 1459 (1509)
T ss_pred CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hHHHhHHhccCC-----
Confidence 2334678999999999997543 667899999999999999999999644332 1111 1111111
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
|. .+..-...-.+++..|++.||++|-++.|+++
T Consensus 1460 Pq----~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1460 PQ----IPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred CC----CchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 11 12222334456778999999999988887765
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.4e-21 Score=203.14 Aligned_cols=192 Identities=24% Similarity=0.291 Sum_probs=139.5
Q ss_pred cccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 503 LGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 503 lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
||+|+||+||++... +++.+|+|.+.... ....+.+.+|++++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999854 68899999986432 23345678999999999999999999999999999999999999999
Q ss_pred hhhh----------------------------------------------------ccccceeEecCCCcccccceeeee
Q 004345 579 DSFL----------------------------------------------------FDFGLARIFGGNQDQAATKRLVGT 606 (760)
Q Consensus 579 ~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt 606 (760)
.++| .|||+++..... .......++
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~ 157 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---KKIKGRAGT 157 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC---CccccccCC
Confidence 7653 378877654321 112234577
Q ss_pred ccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHH
Q 004345 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIR 686 (760)
Q Consensus 607 ~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 686 (760)
..|+|||.+.+..++.++|||||||+++||++|+.||.......... ........ . ... .+......
T Consensus 158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~----~--~~~----~~~~~~~~ 224 (277)
T cd05577 158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKE---ELKRRTLE----M--AVE----YPDKFSPE 224 (277)
T ss_pred CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHH---HHHhcccc----c--ccc----CCccCCHH
Confidence 89999999988889999999999999999999999986432211100 00000000 0 000 11112345
Q ss_pred HHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 687 CVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 687 ~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
+.+++.+||+.||++|| ++.++++
T Consensus 225 ~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 225 AKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 67888999999999999 5555654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-21 Score=207.32 Aligned_cols=208 Identities=19% Similarity=0.221 Sum_probs=138.0
Q ss_pred cccccC--CceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQG--GFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G--~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
+.||+| +||+||+++. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++|+||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 567776 8999999996 478999999986432 23346789999999999999999999999999999999999999
Q ss_pred CChhhhhc----------------------------------------------------cccceeEecCCCccc-----
Q 004345 576 KSLDSFLF----------------------------------------------------DFGLARIFGGNQDQA----- 598 (760)
Q Consensus 576 gsL~~~L~----------------------------------------------------DFGla~~~~~~~~~~----- 598 (760)
++|.+++. ||+.+..........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD 163 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence 99887641 222111000000000
Q ss_pred ccceeeeeccccCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHH----------------
Q 004345 599 ATKRLVGTYGYMSPEYAMEG--RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWK---------------- 660 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~--~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~---------------- 660 (760)
......++..|||||++... .++.++|||||||++|||++|+.||....... ........
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd08226 164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFPCEES 241 (328)
T ss_pred ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH--HHHHHhcCCCCCCccccccchhhh
Confidence 00011245679999999764 47899999999999999999999986432111 00000000
Q ss_pred hc----------------cCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 661 LW----------------NDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 661 ~~----------------~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+ .......+.+..+...........+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00 000000111111112222334567889999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-20 Score=197.75 Aligned_cols=199 Identities=22% Similarity=0.279 Sum_probs=140.0
Q ss_pred HHHHHhcccccccccc--ccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEeC
Q 004345 488 EELANATNNFQLANKL--GQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVER 563 (760)
Q Consensus 488 ~~l~~~~~~~~~~~~l--G~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~ 563 (760)
.++....++|++.+.+ |+|+||.||++.. .+++.+|+|.+........ |+.....+ +||||+++++.+..+
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecC
Confidence 4444455677777776 9999999999985 4678899999865322111 22222222 799999999999999
Q ss_pred CeeEEEEeccCCCChhhhh---------------------------------------------------ccccceeEec
Q 004345 564 EENMLIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFG 592 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~ 592 (760)
+..++||||+++++|.+++ .|||+++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 161 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG 161 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence 9999999999999998763 2777766543
Q ss_pred CCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
.. ....++..|+|||++....++.++||||||++++||++|+.|+.....+ ......+.... . ....
T Consensus 162 ~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~-~~~~--- 228 (267)
T PHA03390 162 TP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-ELDLESLLKRQ--Q-KKLP--- 228 (267)
T ss_pred CC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHhh--c-ccCC---
Confidence 21 1235788999999999889999999999999999999999998633221 11111111111 0 0000
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCC-HHHHHH
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPN-MPTVVS 710 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt-~~ev~~ 710 (760)
........+.+++.+||+.+|.+||+ ++++++
T Consensus 229 ------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 229 ------FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ------cccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 01122345778888999999999996 588874
|
|
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.1e-21 Score=201.29 Aligned_cols=207 Identities=20% Similarity=0.292 Sum_probs=142.7
Q ss_pred cccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcC---CCCccceeeeEEEeCCe-----
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNL---QHRNLVRLLGCCVEREE----- 565 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l---~H~nIv~l~g~~~~~~~----- 565 (760)
|++.+.||+|+||.||+|+.+ +++.+|+|+++.... .....+.+|+.++.++ +|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567799999999999999976 489999999974322 2234577888877665 69999999999998776
Q ss_pred eEEEEeccCCCChhhh----------------------------------------------------hccccceeEecC
Q 004345 566 NMLIYEYMPNKSLDSF----------------------------------------------------LFDFGLARIFGG 593 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~----------------------------------------------------L~DFGla~~~~~ 593 (760)
.+++|||+++ +|.++ |+|||++..+..
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF 159 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence 8999999974 56443 238888877643
Q ss_pred CCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC-CCc-----
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND-NNV----- 667 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~-~~~----- 667 (760)
... .....++..|+|||.+....++.++|||||||++|||++|+.|+......+ ........... ...
T Consensus 160 ~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 160 EMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD---QLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred Ccc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH---HHHHHHHHcCCCChHhcCCC
Confidence 221 123357889999999999999999999999999999999988876432211 11111110000 000
Q ss_pred ----ccccccccc---CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 668 ----IDLVDPLIS---ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 668 ----~~~~d~~l~---~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......... ..........+.+++.+||+.||.+||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000000000 0001122356678999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.2e-21 Score=203.57 Aligned_cols=210 Identities=17% Similarity=0.189 Sum_probs=141.0
Q ss_pred cccccccCCceeEEEEEecCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCC
Q 004345 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 499 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
+.+.+|.|+++.||++.. +++.||||+++.. .....+.+.+|++++++++|+||+++++++.+.+..+++|||+++|
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 345556666666666655 6899999998754 3345578999999999999999999999999999999999999999
Q ss_pred Chhhhh----------------------------------------------------ccccceeEecCCCc-----ccc
Q 004345 577 SLDSFL----------------------------------------------------FDFGLARIFGGNQD-----QAA 599 (760)
Q Consensus 577 sL~~~L----------------------------------------------------~DFGla~~~~~~~~-----~~~ 599 (760)
+|.++| +|||.+..+..... ...
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~ 164 (314)
T cd08216 85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDF 164 (314)
T ss_pred CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccc
Confidence 997763 26776654422111 011
Q ss_pred cceeeeeccccCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHh----ccC-------CC
Q 004345 600 TKRLVGTYGYMSPEYAMEG--RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL----WND-------NN 666 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~--~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~----~~~-------~~ 666 (760)
.....++..|+|||.+... .++.++|||||||++|||++|+.||....... .+....... +.. ..
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 165 PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred cccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCchhhhcCC
Confidence 1234567789999998763 58899999999999999999999986432211 111110000 000 00
Q ss_pred ccc----cccccc----cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 667 VID----LVDPLI----SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 667 ~~~----~~d~~l----~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+ ..++.. ...........+.+++.+||+.||++|||+.++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000 000000 001111223567889999999999999999999873
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.6e-21 Score=196.80 Aligned_cols=211 Identities=22% Similarity=0.309 Sum_probs=148.5
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc-c-chHhHHHHHHHHhcCCCCc-cceeeeEEEeCC------
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG-Q-GQEEFMNEVMVISNLQHRN-LVRLLGCCVERE------ 564 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~-~~~~f~~E~~~l~~l~H~n-Iv~l~g~~~~~~------ 564 (760)
..|...++||+|+||+||+|+. .+|+.||+|++.-... + --....+|+.++++|+|+| ||+|++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 3466678899999999999994 5789999999975433 2 2345789999999999999 999999999877
Q ss_pred eeEEEEeccCCCChhhh------------------------------------------------------hccccceeE
Q 004345 565 ENMLIYEYMPNKSLDSF------------------------------------------------------LFDFGLARI 590 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~------------------------------------------------------L~DFGla~~ 590 (760)
..++|+||+.. +|..+ |+|||+|+.
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence 78899999742 22111 359999997
Q ss_pred ecCCCcccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC---CC
Q 004345 591 FGGNQDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND---NN 666 (760)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~ 666 (760)
+.-... .....++|..|.|||++.+. .|+...||||+||++.||++++.-|+...+.+ ....+.+.... ..
T Consensus 170 ~~ip~~--~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~---ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 170 FSIPMR--TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID---QLFRIFRLLGTPNEKD 244 (323)
T ss_pred hcCCcc--cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH---HHHHHHHHcCCCCccC
Confidence 642221 23456889999999999876 69999999999999999999888776544422 22222222211 11
Q ss_pred ccc---ccc--ccccC----CCCHHH----HHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 667 VID---LVD--PLISE----SGFKME----IIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 667 ~~~---~~d--~~l~~----~~~~~~----~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
... +.+ ..... .....+ .....+++.+|++.+|.+|.|++..+.+
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 100 001 00000 000000 1367889999999999999999999885
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-21 Score=209.39 Aligned_cols=219 Identities=19% Similarity=0.287 Sum_probs=152.3
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC-----eeE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE-----ENM 567 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~-----~~~ 567 (760)
+|++.+.||+|++|.||+|+.. +++.||||++.... ....+.+.+|+.++++++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788899999999999999965 58899999987643 345568999999999999999999999998775 789
Q ss_pred EEEeccCCCChhhh--------------------------------------------------hccccceeEecCCCcc
Q 004345 568 LIYEYMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 568 lV~Ey~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
+||||+++ +|..+ |+|||++.........
T Consensus 81 lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~ 159 (330)
T cd07834 81 IVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE 159 (330)
T ss_pred EEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence 99999984 56543 1389998876433210
Q ss_pred -cccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHh--------ccCCCc
Q 004345 598 -AATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL--------WNDNNV 667 (760)
Q Consensus 598 -~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~ 667 (760)
.......++..|+|||.+... .++.++||||||++++||++|+.||...........+...... ......
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (330)
T cd07834 160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA 239 (330)
T ss_pred cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence 112234678899999999887 7999999999999999999999998644322111100000000 000011
Q ss_pred cccccccccC-C-----CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH--Hhcc
Q 004345 668 IDLVDPLISE-S-----GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM--LNSE 715 (760)
Q Consensus 668 ~~~~d~~l~~-~-----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~--L~~~ 715 (760)
.+.+...... . ........+.+++.+||+.+|++||++.++++. +++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 295 (330)
T cd07834 240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL 295 (330)
T ss_pred hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence 1111100000 0 001123457789999999999999999999984 5443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-21 Score=220.16 Aligned_cols=217 Identities=22% Similarity=0.270 Sum_probs=139.1
Q ss_pred hccccccccccccCCceeEEEEEecC--CcEEEEEE--------------ecc---cCccchHhHHHHHHHHhcCCCCcc
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQD--GQEIAVKR--------------LSK---ASGQGQEEFMNEVMVISNLQHRNL 553 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~--------------l~~---~~~~~~~~f~~E~~~l~~l~H~nI 553 (760)
..++|++.++||+|+||.||++..+. +...++|. +.+ ........+.+|+.+|++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 35789999999999999999987532 22222221 110 112234568899999999999999
Q ss_pred ceeeeEEEeCCeeEEEEeccCCCChhhh----------------------------------------------------
Q 004345 554 VRLLGCCVEREENMLIYEYMPNKSLDSF---------------------------------------------------- 581 (760)
Q Consensus 554 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~---------------------------------------------------- 581 (760)
|++++++...+..++|+|++.. +|..+
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG 304 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 9999999999999999998753 22221
Q ss_pred ---hccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCC-CCCcccccccHHHH
Q 004345 582 ---LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT-SFYHEEFELTLLGY 657 (760)
Q Consensus 582 ---L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~-~~~~~~~~~~~~~~ 657 (760)
|+|||+++.+..... .......||..|+|||++....++.++|||||||++|||++|..++ ..........+...
T Consensus 305 ~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~ 383 (501)
T PHA03210 305 KIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI 383 (501)
T ss_pred CEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence 249999987643322 1222357999999999999999999999999999999999987543 22211111111111
Q ss_pred HHHhc-cCC-------Ccccccccc-ccC--CCCHH------HHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 658 AWKLW-NDN-------NVIDLVDPL-ISE--SGFKM------EIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 658 ~~~~~-~~~-------~~~~~~d~~-l~~--~~~~~------~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..... ... ++.+.++.. +.. ..... ....+.+++.+|++.||++|||+.|+++.
T Consensus 384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 10000 000 000111000 000 00000 01245667889999999999999999873
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-20 Score=200.28 Aligned_cols=201 Identities=24% Similarity=0.326 Sum_probs=145.9
Q ss_pred ccccccccccCCceeEEEEEe----cCCcEEEEEEecccC----ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCee
Q 004345 496 NFQLANKLGQGGFGPVYKGKL----QDGQEIAVKRLSKAS----GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~ 566 (760)
+|++.+.||+|+||.||++.. .+++.||+|++.... ....+++.+|+.++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999985 368899999987532 23346788999999999 599999999999999999
Q ss_pred EEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCc
Q 004345 567 MLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~ 596 (760)
++|+||+++++|.++| +|||+++.......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV 160 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence 9999999999998763 38998876533221
Q ss_pred ccccceeeeeccccCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEG--RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
.......|+..|+|||.+... .++.++||||||+++|||++|+.|+...... .............. +.
T Consensus 161 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~~~~~~~~~~~-------~~ 230 (290)
T cd05613 161 -ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK--NSQAEISRRILKSE-------PP 230 (290)
T ss_pred -cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc--ccHHHHHHHhhccC-------CC
Confidence 112235688999999998753 4788999999999999999999998632211 11111111111110 00
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
.+......+.+++.+||+.+|++|| ++.+++.
T Consensus 231 ----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 231 ----YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ----CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 1111224567888999999999997 5565544
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-20 Score=199.79 Aligned_cols=192 Identities=24% Similarity=0.268 Sum_probs=136.2
Q ss_pred ccccCCceeEEEEEec-CCcEEEEEEecccCc---cchHhHHHHHHHH---hcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 502 KLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG---QGQEEFMNEVMVI---SNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 502 ~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~f~~E~~~l---~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
.||+|+||.||++... +++.+|+|.+.+... .....+.+|..++ ...+||||+++++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999964 688999998865321 2223445555443 34479999999999999999999999999
Q ss_pred CCChhhhh--------------------------------------------------ccccceeEecCCCcccccceee
Q 004345 575 NKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLV 604 (760)
Q Consensus 575 ~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 604 (760)
+++|..+| +|||++....... .....
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~ 156 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASV 156 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----ccCcC
Confidence 99997653 3899887553221 12346
Q ss_pred eeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 605 GTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 605 gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
|+..|+|||.+.. ..++.++|||||||+++||++|+.||......... ....... ..+..+ +...
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~----~~~~~~~------~~~~~~----~~~~ 222 (279)
T cd05633 157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH----EIDRMTL------TVNVEL----PDSF 222 (279)
T ss_pred CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH----HHHHHhh------cCCcCC----cccc
Confidence 8999999999864 55899999999999999999999998643221111 0110000 001111 1112
Q ss_pred HHHHHHHHHhcccCCcCCCC-----CHHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRP-----NMPTVVSM 711 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~~ 711 (760)
...+.+++.+|++.||.+|| +++++++.
T Consensus 223 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 34567788899999999999 59888774
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.7e-21 Score=208.85 Aligned_cols=219 Identities=19% Similarity=0.268 Sum_probs=149.0
Q ss_pred HHHHHHhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeC
Q 004345 487 FEELANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER 563 (760)
Q Consensus 487 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~ 563 (760)
..++...+++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++.+++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 456677889999999999999999999985 578899999987532 23356788999999999999999999988643
Q ss_pred ------CeeEEEEeccCCCChhhh-------------------------------------------------hccccce
Q 004345 564 ------EENMLIYEYMPNKSLDSF-------------------------------------------------LFDFGLA 588 (760)
Q Consensus 564 ------~~~~lV~Ey~~~gsL~~~-------------------------------------------------L~DFGla 588 (760)
...++++|++ +++|..+ |+|||++
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~ 167 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 167 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccc
Confidence 3467888876 6677543 1388887
Q ss_pred eEecCCCcccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHH-H-------HHH
Q 004345 589 RIFGGNQDQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL-G-------YAW 659 (760)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~-~-------~~~ 659 (760)
+.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.|+............ . ...
T Consensus 168 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (345)
T cd07877 168 RHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 242 (345)
T ss_pred ccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 75421 1223467889999999866 56889999999999999999999998543221110000 0 000
Q ss_pred HhccCCCcccc---ccccccCCC---CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 660 KLWNDNNVIDL---VDPLISESG---FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 660 ~~~~~~~~~~~---~d~~l~~~~---~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+........ ++....... .......+.+++.+|++.||.+||++.+++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 243 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred hhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 00000000000 000000000 00112457789999999999999999999874
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.5e-21 Score=200.12 Aligned_cols=208 Identities=23% Similarity=0.328 Sum_probs=145.6
Q ss_pred cccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
|+..+.||+|++|.||+|+.. +++.+|+|.+.... ....+.+.+|+.++++++|+||+++++++.+.+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456789999999999999965 58999999997653 334567889999999999999999999999999999999999
Q ss_pred CCCChhhhh---------------------------------------------------ccccceeEecCCCcccccce
Q 004345 574 PNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 574 ~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
+ ++|.++| +|||+++....... ....
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~ 157 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR--TYTH 157 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--ccCc
Confidence 8 4776542 37887775532211 1122
Q ss_pred eeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC---------Cc--ccc
Q 004345 603 LVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN---------NV--IDL 670 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~--~~~ 670 (760)
..++..|+|||.+... .++.++|||||||+++||++|+.|+....... ............ .. .+.
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID---QLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 3457789999998776 78999999999999999999998885432111 111111100000 00 000
Q ss_pred ccccccC----CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 671 VDPLISE----SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 671 ~d~~l~~----~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.-+.... ...+.....+.+++..||+.+|++||++.+|+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000000 000011356889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=202.96 Aligned_cols=211 Identities=18% Similarity=0.294 Sum_probs=145.1
Q ss_pred HhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC----
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE---- 564 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~---- 564 (760)
...++|++.+.||+|+||.||++.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 3467899999999999999999984 478899999986432 223457889999999999999999999987654
Q ss_pred --eeEEEEeccCCCChhhhh-------------------------------------------------ccccceeEecC
Q 004345 565 --ENMLIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 565 --~~~lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~ 593 (760)
..++||||+ +++|..++ +|||+++....
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 170 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS 170 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence 358999999 66775542 38888875432
Q ss_pred CCcccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH----------HHhc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA----------WKLW 662 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~----------~~~~ 662 (760)
. .....+++.|+|||.+.. ..++.++||||||++++||++|+.||........ +.... ...+
T Consensus 171 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd07880 171 E-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ--LMEIMKVTGTPSKEFVQKL 243 (343)
T ss_pred C-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCHHHHHhh
Confidence 1 123457889999999876 4588999999999999999999999864321100 00000 0000
Q ss_pred cCCCcccccc--ccccCC----CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 663 NDNNVIDLVD--PLISES----GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 663 ~~~~~~~~~d--~~l~~~----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.......... +..... ........+.+++.+|++.||++|||+.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 244 QSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred cchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 000000 00111235778999999999999999999985
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.4e-21 Score=212.58 Aligned_cols=208 Identities=21% Similarity=0.382 Sum_probs=161.1
Q ss_pred cCHHHHHHhccccccccccccCCceeEEEEE-ecCCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEe
Q 004345 485 FNFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562 (760)
Q Consensus 485 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~ 562 (760)
..++.+...++.|++.++||.|.+|.||+++ .++++.+|||++... ....++...|..+++.. +|||++.++|++..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 4556667788889999999999999999999 567889999988654 34556677888888877 69999999999875
Q ss_pred -----CCeeEEEEeccCCCChhhh----------------------------------------------------hccc
Q 004345 563 -----REENMLIYEYMPNKSLDSF----------------------------------------------------LFDF 585 (760)
Q Consensus 563 -----~~~~~lV~Ey~~~gsL~~~----------------------------------------------------L~DF 585 (760)
++++|||||||.+||.-++ |+||
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDF 167 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDF 167 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeee
Confidence 4689999999999998765 2499
Q ss_pred cceeEecCCCcccccceeeeeccccCccccccC-----CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHH
Q 004345 586 GLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG-----RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWK 660 (760)
Q Consensus 586 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~ 660 (760)
|++..+.. .....+..+||+.|||||++.-. .|+..+|+||+|++..||.-|.+|+...++...
T Consensus 168 GvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra--------- 236 (953)
T KOG0587|consen 168 GVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA--------- 236 (953)
T ss_pred eeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh---------
Confidence 99987743 23445567899999999999633 478899999999999999999999864443211
Q ss_pred hccCCCccccc-cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 661 LWNDNNVIDLV-DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 661 ~~~~~~~~~~~-d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+..+. .|...-..+..-.+++.+++..|+..|-++||++.++++
T Consensus 237 ------LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 237 ------LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ------hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 11111 111122223445678899999999999999999998876
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-21 Score=210.69 Aligned_cols=209 Identities=19% Similarity=0.306 Sum_probs=145.8
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe----
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE---- 565 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~---- 565 (760)
..++|++.+.||+|++|.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3578999999999999999999965 5789999998643 22334668899999999999999999998876655
Q ss_pred --eEEEEeccCCCChhhhh-------------------------------------------------ccccceeEecCC
Q 004345 566 --NMLIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGN 594 (760)
Q Consensus 566 --~~lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~ 594 (760)
.++|+||+ +++|.+++ +|||++......
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~ 171 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE 171 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc
Confidence 89999998 55776542 388887754321
Q ss_pred CcccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhc-----------
Q 004345 595 QDQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLW----------- 662 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~----------- 662 (760)
.....++..|+|||.+.. ..++.++|||||||++|||++|+.||........ ........
T Consensus 172 -----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~ 243 (343)
T cd07851 172 -----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQ---LKRIMNLVGTPDEELLQKI 243 (343)
T ss_pred -----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHhcCCCCHHHHhhc
Confidence 223467889999999865 3678999999999999999999999863322111 00000000
Q ss_pred cCCCccccccccc-cCCC-----CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 663 NDNNVIDLVDPLI-SESG-----FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 663 ~~~~~~~~~d~~l-~~~~-----~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
........+.... .... .......+.+++.+|++.+|++|||+.+|++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 244 SSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred cchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000000000000 0000 0011356889999999999999999999976
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-21 Score=190.31 Aligned_cols=201 Identities=19% Similarity=0.312 Sum_probs=150.6
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC----ccc----hHhHHHHHHHHhcC-CCCccceeeeEEEeC
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS----GQG----QEEFMNEVMVISNL-QHRNLVRLLGCCVER 563 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~----~~~----~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~ 563 (760)
-+.|...+.||+|..+.|-++.. +++++.|+|++.... .+. .+.-.+|+.||+++ .||+|+++.++++.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 35677789999999999999885 478899999986321 112 23456799999998 599999999999999
Q ss_pred CeeEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecC
Q 004345 564 EENMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~ 593 (760)
...++|+|.|+.|.|.++| +|||+|..+..
T Consensus 96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~ 175 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEP 175 (411)
T ss_pred chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCC
Confidence 9999999999999999985 39999998765
Q ss_pred CCcccccceeeeeccccCcccccc------CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAME------GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (760)
.+ .....+||++|+|||.+.- ..|+...|+|+.||++|.|+.|.+||- +.. +.- +.+...+|+.
T Consensus 176 Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw--HRk-Qml----MLR~ImeGky 245 (411)
T KOG0599|consen 176 GE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW--HRK-QML----MLRMIMEGKY 245 (411)
T ss_pred ch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh--HHH-HHH----HHHHHHhccc
Confidence 44 3446899999999999852 248889999999999999999999984 211 111 1111222221
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+.-.|. -........+++.+|++.||.+|.|++|+++
T Consensus 246 -qF~spe-----Wadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 246 -QFRSPE-----WADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred -ccCCcc-----hhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 111111 1112345668889999999999999999886
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-20 Score=197.12 Aligned_cols=210 Identities=15% Similarity=0.187 Sum_probs=135.8
Q ss_pred ccccccccccccCCceeEEEEEecC----CcEEEEEEecccCccch-----------HhHHHHHHHHhcCCCCccceeee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQD----GQEIAVKRLSKASGQGQ-----------EEFMNEVMVISNLQHRNLVRLLG 558 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~~~~~-----------~~f~~E~~~l~~l~H~nIv~l~g 558 (760)
.++|++.++||+|+||.||+|...+ +..+|+|.......... .....+...+..++|+||+++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3679999999999999999999654 34566665432211110 11233444566789999999999
Q ss_pred EEEeCC----eeEEEEeccCCCChhhh--------------------------------------------------hcc
Q 004345 559 CCVERE----ENMLIYEYMPNKSLDSF--------------------------------------------------LFD 584 (760)
Q Consensus 559 ~~~~~~----~~~lV~Ey~~~gsL~~~--------------------------------------------------L~D 584 (760)
++.... ..++++|++.. ++.+. |+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~D 169 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIID 169 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEE
Confidence 876544 34677777532 22111 359
Q ss_pred ccceeEecCCCcc-----cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHH
Q 004345 585 FGLARIFGGNQDQ-----AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAW 659 (760)
Q Consensus 585 FGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~ 659 (760)
||+|+.+...... .......||+.|+|||...+..++.++|||||||+++||++|+.||........ +.....
T Consensus 170 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~--~~~~~~ 247 (294)
T PHA02882 170 YGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN--LIHAAK 247 (294)
T ss_pred cCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH--HHHHhH
Confidence 9999876432211 112234699999999999999999999999999999999999999975422211 111000
Q ss_pred HhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 660 KLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 660 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
..+ ...+....+.. ......+.+++..|++.+|++||++.++++.|+
T Consensus 248 ~~~----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 248 CDF----IKRLHEGKIKI---KNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHH----HHHhhhhhhcc---CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 000 00000000000 011255778888999999999999999998773
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.4e-20 Score=195.73 Aligned_cols=191 Identities=24% Similarity=0.293 Sum_probs=136.5
Q ss_pred ccccCCceeEEEEEe-cCCcEEEEEEecccCc---cchHhHHHHHH---HHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 502 KLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG---QGQEEFMNEVM---VISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 502 ~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~f~~E~~---~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
.||+|+||.||++.. .+++.||+|.+.+... .....+..|.. +++..+||||+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999985 4688999999865321 22223445544 3445689999999999999999999999999
Q ss_pred CCChhhhh--------------------------------------------------ccccceeEecCCCcccccceee
Q 004345 575 NKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLV 604 (760)
Q Consensus 575 ~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 604 (760)
+++|..++ +|||+++.+.... .....
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~----~~~~~ 156 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASV 156 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----CcCcC
Confidence 99997653 3899887553221 22346
Q ss_pred eeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 605 GTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 605 gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
|+..|+|||.+..+ .++.++|||||||++|||++|+.||.......... ...... ..+..+.. ..
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~------~~~~~~~~----~~ 222 (278)
T cd05606 157 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----IDRMTL------TMAVELPD----SF 222 (278)
T ss_pred CCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH----HHHHhh------ccCCCCCC----cC
Confidence 89999999999754 58999999999999999999999986432211110 000000 00111111 11
Q ss_pred HHHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
...+.+++.+|++.+|.+|| ++.++++
T Consensus 223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 35677888899999999999 8999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.5e-22 Score=194.27 Aligned_cols=199 Identities=24% Similarity=0.339 Sum_probs=145.1
Q ss_pred ccccccccCCceeEEEEEe-cCCcEEEEEEecccC-ccchHhHHHHHHHHh-cCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 498 QLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS-GQGQEEFMNEVMVIS-NLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 498 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~-~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
+.+..||.|+||+|+|-.. +.|+.+|||+++... ..++++++.|.+... .-+.||||+++|.+..++..|+.||.|.
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 3457899999999999985 478999999998543 466778999998654 4579999999999999999999999994
Q ss_pred CCChhhh--------------------------------------------------------hccccceeEecCCCccc
Q 004345 575 NKSLDSF--------------------------------------------------------LFDFGLARIFGGNQDQA 598 (760)
Q Consensus 575 ~gsL~~~--------------------------------------------------------L~DFGla~~~~~~~~~~ 598 (760)
-||+.+ |+|||++-.+- +..
T Consensus 147 -~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv---~Si 222 (361)
T KOG1006|consen 147 -ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV---DSI 222 (361)
T ss_pred -hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH---HHH
Confidence 455443 36999986542 223
Q ss_pred ccceeeeeccccCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 599 ATKRLVGTYGYMSPEYAMEG--RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~--~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
......|-..|||||-+... .|+.+|||||+|++|+|+.||+.|+....+ ..+...+... ++. |.+.
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfeql~~Vv~-gdp-----p~l~ 291 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFEQLCQVVI-GDP-----PILL 291 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHHHHHHHHc-CCC-----Ceec
Confidence 33456788999999999743 489999999999999999999999864432 2222222221 111 1111
Q ss_pred CC-CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 677 ES-GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 677 ~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.. ...+-...+.+++-.|+-.|-.+||..+++.++
T Consensus 292 ~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 292 FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 11 111223456667778999999999999998764
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-20 Score=201.54 Aligned_cols=210 Identities=19% Similarity=0.259 Sum_probs=141.8
Q ss_pred ccccccccccCCceeEEEEEec-C--CcEEEEEEecccC--ccchHhHHHHHHHHhcC-CCCccceeeeEEEeC----Ce
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-D--GQEIAVKRLSKAS--GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVER----EE 565 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~--~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~----~~ 565 (760)
+|++.+.||+|+||.||++... . ++.||+|++.... ....+.+.+|+.++.++ +||||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778899999999999999964 3 6789999987432 22356788999999999 599999999976543 35
Q ss_pred eEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCC
Q 004345 566 NMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~ 595 (760)
.++++||+. ++|..++ +|||+++.+....
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 688899886 4665442 4999998664322
Q ss_pred cc--cccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc---------
Q 004345 596 DQ--AATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN--------- 663 (760)
Q Consensus 596 ~~--~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~--------- 663 (760)
.. .......|+..|+|||.+.. ..++.++|||||||++|||++|+.|+....... ..........
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD---QLNQILQVLGTPDEETLSR 236 (332)
T ss_pred ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH---HHHHHHHHhCCCCHHHHHh
Confidence 11 11233578999999998765 468999999999999999999999986432211 1111000000
Q ss_pred --CCCcccccc-------ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 664 --DNNVIDLVD-------PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 664 --~~~~~~~~d-------~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......... ..+.. ........+.+++.+|++.||++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 237 IGSPKAQNYIRSLPNIPKKPFES-IFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhhhhHHHHHHhccccCCcchHh-hCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 00000 00011246778999999999999999999875
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-21 Score=192.09 Aligned_cols=150 Identities=26% Similarity=0.362 Sum_probs=129.3
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|..+++||+|.||+|.+++- ..++.+|+|++++.- ......-+.|-++|+..+||.+..|.-.+...+++|.|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 36788899999999999999985 478999999998653 33344567899999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||..||.|.-+| +||||++.- -.+...
T Consensus 247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~--I~~g~t 324 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE--IKYGDT 324 (516)
T ss_pred EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc--ccccce
Confidence 9999999997664 399999852 123345
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
+...+||+.|+|||++....|..++|.|.+||++|||++|+.||..
T Consensus 325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn 370 (516)
T KOG0690|consen 325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN 370 (516)
T ss_pred eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc
Confidence 6678999999999999999999999999999999999999999864
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.3e-20 Score=191.13 Aligned_cols=186 Identities=25% Similarity=0.328 Sum_probs=140.6
Q ss_pred cccCCceeEEEEEec-CCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 503 LGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 503 lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
||+|+||.||++... +++.+|+|.+..... ...+.+.+|+.++++++|+||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999965 588999999875432 2456789999999999999999999999999999999999999999
Q ss_pred hhhh--------------------------------------------------ccccceeEecCCCcccccceeeeecc
Q 004345 579 DSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTYG 608 (760)
Q Consensus 579 ~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (760)
.+++ .|||++........ ......++..
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~ 158 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--RTNTFCGTPE 158 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC--cccCCcCCcc
Confidence 8763 37887776533211 1223567889
Q ss_pred ccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHH
Q 004345 609 YMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCV 688 (760)
Q Consensus 609 y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 688 (760)
|+|||.......+.++|+||||+++||+++|+.|+..... ..... ... ... ..+ +......+.
T Consensus 159 ~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~---~~~-~~~------~~~----~~~~~~~l~ 221 (250)
T cd05123 159 YLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYE---KIL-KDP------LRF----PEFLSPEAR 221 (250)
T ss_pred ccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHH---HHh-cCC------CCC----CCCCCHHHH
Confidence 9999999888899999999999999999999999853221 11111 111 100 001 111134567
Q ss_pred HHHHhcccCCcCCCCCHHH
Q 004345 689 NVGLLCVQEFVKDRPNMPT 707 (760)
Q Consensus 689 ~l~~~Cl~~~P~~RPt~~e 707 (760)
+++.+||..||++||++.+
T Consensus 222 ~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 222 DLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHhcCCHhhCCCccc
Confidence 8899999999999999955
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-20 Score=185.95 Aligned_cols=211 Identities=23% Similarity=0.312 Sum_probs=153.3
Q ss_pred CHHHHHHhccccccccccccCCceeEEEEE-ecCCcEEEEEEecccCccchHhHHHHHHHHhcCC-CCccceeeeEEEeC
Q 004345 486 NFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVER 563 (760)
Q Consensus 486 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~ 563 (760)
.++|+.+-|+ +.||+|+|+.|--++ +.+++++|||++.+.....+.+..+|++++.+.+ |+||++|+++|+++
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 4677776664 789999999999988 7889999999999887788899999999999885 99999999999999
Q ss_pred CeeEEEEeccCCCChhhhh-----------------------------------------------------ccccceeE
Q 004345 564 EENMLIYEYMPNKSLDSFL-----------------------------------------------------FDFGLARI 590 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~ 590 (760)
...|||||-|.||+|..+| +||.|..-
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG 228 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence 9999999999999997763 36666543
Q ss_pred ecCCCc-----ccccceeeeeccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHH
Q 004345 591 FGGNQD-----QAATKRLVGTYGYMSPEYAM-----EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWK 660 (760)
Q Consensus 591 ~~~~~~-----~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~ 660 (760)
+..+.+ .......+|+..|||||+.. ...|+.+.|.||+||+||-|++|..||......+-
T Consensus 229 ~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC--------- 299 (463)
T KOG0607|consen 229 IKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC--------- 299 (463)
T ss_pred cccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC---------
Confidence 322211 11223467889999999874 33588999999999999999999999965333211
Q ss_pred hccCCCccccccc----cc---cCCCCHHH----HHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 661 LWNDNNVIDLVDP----LI---SESGFKME----IIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 661 ~~~~~~~~~~~d~----~l---~~~~~~~~----~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
-|.+++.-..... .+ ..+++..+ ..+..+++...+-.++.+|.++.+|++
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 1222221111100 00 11122211 233445556666789999999999987
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.2e-21 Score=197.90 Aligned_cols=206 Identities=25% Similarity=0.408 Sum_probs=147.8
Q ss_pred ccccccccccccCCceeEEEEE-ecCCcEEEEEEeccc-C------ccchHhHHHHHHHHhcCCCCccceeeeEEE-eCC
Q 004345 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA-S------GQGQEEFMNEVMVISNLQHRNLVRLLGCCV-ERE 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~-~------~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~-~~~ 564 (760)
.++|-+++.||+|+|+.|||+. +...+.||||+-.-. + ....+...+|.+|.+.|+||.||++++++. +.+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 3568889999999999999998 456778999975421 1 122346789999999999999999999985 556
Q ss_pred eeEEEEeccCCCChhhhh-------------------------------------------------------cccccee
Q 004345 565 ENMLIYEYMPNKSLDSFL-------------------------------------------------------FDFGLAR 589 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L-------------------------------------------------------~DFGla~ 589 (760)
..|-|+|||+|.+|+-|| .||||++
T Consensus 542 sFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK 621 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK 621 (775)
T ss_pred cceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence 789999999999999874 3999999
Q ss_pred EecCCCccc-----ccceeeeeccccCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHH
Q 004345 590 IFGGNQDQA-----ATKRLVGTYGYMSPEYAMEG----RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWK 660 (760)
Q Consensus 590 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~----~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~ 660 (760)
++....+.. .+....||+.|++||.+.-+ +++.|+||||.||++|..+.|++||...... .+++
T Consensus 622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ--QdIL----- 694 (775)
T KOG1151|consen 622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ--QDIL----- 694 (775)
T ss_pred hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH--HHHH-----
Confidence 987654432 33446799999999998644 4889999999999999999999999633221 1111
Q ss_pred hccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 661 LWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 661 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+..+.....-... ..+....+...++.+||++.-++|....++..
T Consensus 695 --qeNTIlkAtEVqFP--~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 695 --QENTILKATEVQFP--PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred --hhhchhcceeccCC--CCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 11111111100000 00111234556778999999999987666543
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-19 Score=185.79 Aligned_cols=188 Identities=24% Similarity=0.331 Sum_probs=141.8
Q ss_pred CceeEEEEEec-CCcEEEEEEecccCccc-hHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCChhhhh--
Q 004345 507 GFGPVYKGKLQ-DGQEIAVKRLSKASGQG-QEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL-- 582 (760)
Q Consensus 507 ~~g~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L-- 582 (760)
+||.||+|+.. +++.+|+|++....... .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 48999999997654444 688999999999999999999999999999999999999999988763
Q ss_pred ------------------------------------------------ccccceeEecCCCcccccceeeeeccccCccc
Q 004345 583 ------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEY 614 (760)
Q Consensus 583 ------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~ 614 (760)
.|||.+....... ......++..|++||.
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEV 157 (244)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCCCHHH
Confidence 3777777654321 2233567889999999
Q ss_pred cccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhc
Q 004345 615 AMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLC 694 (760)
Q Consensus 615 ~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C 694 (760)
.....++.++||||||++++||++|..|+...... ..... .......... .........+.+++.+|
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~--~~~~~----~~~~~~~~~~-------~~~~~~~~~~~~~i~~~ 224 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL--LELFK----KIGKPKPPFP-------PPEWKISPEAKDLIRKL 224 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHH----HHhccCCCCc-------cccccCCHHHHHHHHHH
Confidence 99888999999999999999999999998542111 11111 1111110000 00000225678899999
Q ss_pred ccCCcCCCCCHHHHHH
Q 004345 695 VQEFVKDRPNMPTVVS 710 (760)
Q Consensus 695 l~~~P~~RPt~~ev~~ 710 (760)
+..+|++||++.++++
T Consensus 225 l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 225 LVKDPEKRLTAEEALQ 240 (244)
T ss_pred ccCCchhccCHHHHhh
Confidence 9999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-20 Score=195.80 Aligned_cols=148 Identities=28% Similarity=0.451 Sum_probs=127.6
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
+.|+.-++||+|+||.||-++.. +|+.+|.|++.+. ..++....++|-.+|.+++.+.||.|--.++..+.++||+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 45777899999999999999854 6899999998754 2345567889999999999999999999999999999999
Q ss_pred eccCCCChhhhh----------------------------------------------------ccccceeEecCCCccc
Q 004345 571 EYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 571 Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
..|.||+|.-+| +|.|||..+...+..
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~- 343 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPI- 343 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCcc-
Confidence 999999997664 388888877554432
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
...+||.+|||||++.+..|+...|.||+||+||||+.|+.||..
T Consensus 344 --~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 344 --RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred --ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 234899999999999999999999999999999999999999864
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.6e-20 Score=212.43 Aligned_cols=71 Identities=34% Similarity=0.562 Sum_probs=59.7
Q ss_pred HHhccccccccccccCCceeEEEEEec-CCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEE
Q 004345 491 ANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCV 561 (760)
Q Consensus 491 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~ 561 (760)
.+..++|+.++.||+||||.|||++.+ ||+.+|||++... +........+|++++++|+|||||+++..+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWV 547 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWV 547 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhh
Confidence 456678888999999999999999965 8999999999743 3344567889999999999999999977654
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=6e-19 Score=207.68 Aligned_cols=87 Identities=22% Similarity=0.333 Sum_probs=76.4
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.++||+|+||.||+|... +++.||||+++... ......+.+|+.+++.++||||+++++++......+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 67899999999999999999965 68899999987532 223467889999999999999999999999999999999
Q ss_pred eccCCCChhhh
Q 004345 571 EYMPNKSLDSF 581 (760)
Q Consensus 571 Ey~~~gsL~~~ 581 (760)
||+++++|..+
T Consensus 84 Ey~~g~~L~~l 94 (669)
T cd05610 84 EYLIGGDVKSL 94 (669)
T ss_pred eCCCCCCHHHH
Confidence 99999999765
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.2e-20 Score=189.21 Aligned_cols=153 Identities=27% Similarity=0.398 Sum_probs=126.7
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~l 568 (760)
..+|.++.+||+|+||.|.+|.-+ +.+.+|||++++. .....+--+.|-++|+-. +-|.+++|..++..-+.+|.
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 346888999999999999999854 5678999999864 233444556788888766 57899999999999999999
Q ss_pred EEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCccc
Q 004345 569 IYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 569 V~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||||+.+|+|--+| +|||+++.- -....
T Consensus 428 VMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn--i~~~~ 505 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN--IFDGV 505 (683)
T ss_pred EEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccc--ccCCc
Confidence 99999999985542 499999852 12234
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHE 648 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~ 648 (760)
.+...+||+.|+|||++...+|+..+|.|||||+||||+.|..||+...+
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE 555 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE 555 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 56678999999999999999999999999999999999999999975443
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=3e-20 Score=190.65 Aligned_cols=217 Identities=20% Similarity=0.282 Sum_probs=155.7
Q ss_pred cCHHHHHHhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCC--C----ccceee
Q 004345 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH--R----NLVRLL 557 (760)
Q Consensus 485 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H--~----nIv~l~ 557 (760)
|...|.. +++|.+...+|+|.||.|-++... .+..||||+++.. ...++..+-|++++.+|.+ | -+|.+.
T Consensus 81 ~~~gD~l--~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~ 157 (415)
T KOG0671|consen 81 YQVGDIL--TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMR 157 (415)
T ss_pred EEecccc--ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence 4444443 788999999999999999999854 4688999999754 3456677889999999942 2 378899
Q ss_pred eEEEeCCeeEEEEeccCCCChhhhh-------------------------------------------------------
Q 004345 558 GCCVEREENMLIYEYMPNKSLDSFL------------------------------------------------------- 582 (760)
Q Consensus 558 g~~~~~~~~~lV~Ey~~~gsL~~~L------------------------------------------------------- 582 (760)
+++.-.++.+||+|.| |-|+.++|
T Consensus 158 ~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~ 236 (415)
T KOG0671|consen 158 DWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNP 236 (415)
T ss_pred hhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEecc
Confidence 9999999999999988 33555542
Q ss_pred -----------------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 583 -----------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 583 -----------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
.|||.|...... ...++.|..|.|||++.+-.++.++||||+||+|.|+.||..-|.-
T Consensus 237 k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 237 KKKVCFIRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred CCccceeccCCCcceEEEecCCcceeccC-----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc
Confidence 289988764221 2457889999999999999999999999999999999999988764
Q ss_pred CcccccccHHHH--------------HHHhccCCCc-----------ccc---cccc-ccCCCCHHHHHHHHHHHHhccc
Q 004345 646 YHEEFELTLLGY--------------AWKLWNDNNV-----------IDL---VDPL-ISESGFKMEIIRCVNVGLLCVQ 696 (760)
Q Consensus 646 ~~~~~~~~~~~~--------------~~~~~~~~~~-----------~~~---~d~~-l~~~~~~~~~~~~~~l~~~Cl~ 696 (760)
..+.+.+.+... ..+.+..+.+ ... ..|. .--.....+..++++|+..++.
T Consensus 312 Hen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~ 391 (415)
T KOG0671|consen 312 HENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLE 391 (415)
T ss_pred CCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHc
Confidence 433222111111 1111111111 000 1110 0011234566789999999999
Q ss_pred CCcCCCCCHHHHHH
Q 004345 697 EFVKDRPNMPTVVS 710 (760)
Q Consensus 697 ~~P~~RPt~~ev~~ 710 (760)
.||.+|+|+.|+++
T Consensus 392 fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 392 FDPARRITLREALS 405 (415)
T ss_pred cCccccccHHHHhc
Confidence 99999999999876
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.9e-20 Score=180.63 Aligned_cols=198 Identities=22% Similarity=0.371 Sum_probs=144.3
Q ss_pred cccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEEEEecc
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.+.+..||.|..|.|++++.. .+..+|||.+.+.. .++.++++..+.++.+-+ .|.||+.+|+|..+...++.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 345678999999999999965 58899999997653 455678888998877664 899999999999998888888887
Q ss_pred CC----------CChhhh-----------------------------------------hccccceeEecCCCcccccce
Q 004345 574 PN----------KSLDSF-----------------------------------------LFDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 574 ~~----------gsL~~~-----------------------------------------L~DFGla~~~~~~~~~~~~~~ 602 (760)
.. +.+-+. |+|||++-.+-.. .....
T Consensus 174 s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS---kAhtr 250 (391)
T KOG0983|consen 174 STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS---KAHTR 250 (391)
T ss_pred HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc---ccccc
Confidence 41 111111 3699999876432 23344
Q ss_pred eeeeccccCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 603 LVGTYGYMSPEYAME---GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~---~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
..|-+.|||||-+.- ..|+.++|||||||+|+||.||..||.....+.+. ......+ ..|.+.+..
T Consensus 251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~-----ltkvln~------ePP~L~~~~ 319 (391)
T KOG0983|consen 251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEV-----LTKVLNE------EPPLLPGHM 319 (391)
T ss_pred ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHH-----HHHHHhc------CCCCCCccc
Confidence 678999999999863 46899999999999999999999999765443221 1111111 113332221
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
- -...+.++...||+.|+.+||...++++
T Consensus 320 g--FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 320 G--FSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred C--cCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 0 2345677788999999999999998876
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.7e-20 Score=193.92 Aligned_cols=142 Identities=32% Similarity=0.546 Sum_probs=123.5
Q ss_pred ccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCC
Q 004345 500 ANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
.++||+|.||+||-|+. ++|+.||||++.+. .......+.+|+.||.+++||.||.|--.|+..+..++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 37999999999999995 57999999999864 3455678999999999999999999999999999999999999765
Q ss_pred Chhhh------------------------------------------------------hccccceeEecCCCcccccce
Q 004345 577 SLDSF------------------------------------------------------LFDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 577 sL~~~------------------------------------------------------L~DFGla~~~~~~~~~~~~~~ 602 (760)
-|+-. |+|||.||+++... ....
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks---FRrs 725 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS---FRRS 725 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh---hhhh
Confidence 44432 25999999987543 2345
Q ss_pred eeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 004345 603 LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTS 644 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~ 644 (760)
++||+.|+|||++++..|+..-|+||.||++|--++|..||.
T Consensus 726 VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFN 767 (888)
T KOG4236|consen 726 VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFN 767 (888)
T ss_pred hcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCC
Confidence 899999999999999999999999999999999999999986
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-19 Score=179.48 Aligned_cols=150 Identities=24% Similarity=0.434 Sum_probs=119.1
Q ss_pred cccccccccccCCceeEEEEEec---C--CcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEe-CCee
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ---D--GQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVE-REEN 566 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~---~--~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~-~~~~ 566 (760)
..|+....||+|.||.||||.-. + .+.+|+|+++.... .-.....+|+.+++.|+||||+.|..++.. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 45788899999999999999632 2 34799999975422 234568899999999999999999999988 7788
Q ss_pred EEEEeccCCCChhhh-----------------------------------------------------------hccccc
Q 004345 567 MLIYEYMPNKSLDSF-----------------------------------------------------------LFDFGL 587 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~-----------------------------------------------------------L~DFGl 587 (760)
+|++||.+.. |.+. |+|||+
T Consensus 104 ~l~fdYAEhD-L~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGl 182 (438)
T KOG0666|consen 104 WLLFDYAEHD-LWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGL 182 (438)
T ss_pred EEEehhhhhh-HHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccH
Confidence 9999999763 3322 249999
Q ss_pred eeEecCCCcc-cccceeeeeccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 588 ARIFGGNQDQ-AATKRLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 588 a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
+|++...-.. .....++-|+.|.|||.+.+.+ ||.+.||||.||+..||+|-++.|..
T Consensus 183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 9987543322 2445678899999999998765 89999999999999999998877643
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=6e-19 Score=162.77 Aligned_cols=146 Identities=27% Similarity=0.471 Sum_probs=115.2
Q ss_pred ccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+|...++||+|.||+||||+. ++++.||+|+++-.. +.--...++|+.+++.++|.|||+++++...+...-||+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 355568999999999999995 467899999887432 23345789999999999999999999999999999999999
Q ss_pred cC----------CCChhhh----------------------------------------hccccceeEecCCCcccccce
Q 004345 573 MP----------NKSLDSF----------------------------------------LFDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 573 ~~----------~gsL~~~----------------------------------------L~DFGla~~~~~~~~~~~~~~ 602 (760)
|. ||.++.- |+|||+++.++-... ....
T Consensus 83 cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvr--cysa 160 (292)
T KOG0662|consen 83 CDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR--CYSA 160 (292)
T ss_pred hhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE--eeec
Confidence 85 3433321 259999998753321 2233
Q ss_pred eeeeccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCC
Q 004345 603 LVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGRKNT 643 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~-~s~ksDVwSfGv~l~ElltG~~p~ 643 (760)
.+-|..|.+|.++-+.+ |+...|+||-||++.|+....+|.
T Consensus 161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrpl 202 (292)
T KOG0662|consen 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202 (292)
T ss_pred eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCC
Confidence 46789999999987665 889999999999999999744443
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.6e-19 Score=180.45 Aligned_cols=172 Identities=19% Similarity=0.110 Sum_probs=124.7
Q ss_pred CCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCChhhhh--
Q 004345 506 GGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL-- 582 (760)
Q Consensus 506 G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L-- 582 (760)
|.+|.||+++. .+++.+|+|++.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 88999999996 468899999986542 3345566666677999999999999999999999999999997753
Q ss_pred ------------------------------------------------ccccceeEecCCCcccccceeeeeccccCccc
Q 004345 583 ------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEY 614 (760)
Q Consensus 583 ------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~ 614 (760)
.|||++..+... .....++..|+|||.
T Consensus 79 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~aPE~ 153 (237)
T cd05576 79 FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYCAPEV 153 (237)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCccccCCcc
Confidence 266665543221 112345677999999
Q ss_pred cccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhc
Q 004345 615 AMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLC 694 (760)
Q Consensus 615 ~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C 694 (760)
+....++.++||||+|+++|||++|+.|+...... ... .....+ +......+.+++.+|
T Consensus 154 ~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------------~~~-----~~~~~~----~~~~~~~~~~li~~~ 212 (237)
T cd05576 154 GGISEETEACDWWSLGAILFELLTGKTLVECHPSG------------INT-----HTTLNI----PEWVSEEARSLLQQL 212 (237)
T ss_pred cCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------------ccc-----ccccCC----cccCCHHHHHHHHHH
Confidence 98888999999999999999999999876421110 000 000001 111224567888999
Q ss_pred ccCCcCCCCCHHHH
Q 004345 695 VQEFVKDRPNMPTV 708 (760)
Q Consensus 695 l~~~P~~RPt~~ev 708 (760)
++.||++||++.+.
T Consensus 213 l~~dp~~R~~~~~~ 226 (237)
T cd05576 213 LQFNPTERLGAGVA 226 (237)
T ss_pred ccCCHHHhcCCCcc
Confidence 99999999997433
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-19 Score=179.20 Aligned_cols=202 Identities=18% Similarity=0.206 Sum_probs=146.0
Q ss_pred hccccccc-cccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEe----CCe
Q 004345 493 ATNNFQLA-NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE----REE 565 (760)
Q Consensus 493 ~~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~----~~~ 565 (760)
.+++|++. ++||-|-.|.|-.+..+ +++.+|+|++.. .....+|+++.-+. .|||||.+++++.. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45667654 57999999999999854 688899998853 34567899887665 59999999999864 346
Q ss_pred eEEEEeccCCCChhhhh-------------------------------------------------------ccccceeE
Q 004345 566 NMLIYEYMPNKSLDSFL-------------------------------------------------------FDFGLARI 590 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L-------------------------------------------------------~DFGla~~ 590 (760)
+++|||.|+||.|...| +|||+|+.
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~ 213 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKE 213 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccc
Confidence 78999999999997653 49999997
Q ss_pred ecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccc
Q 004345 591 FGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDL 670 (760)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (760)
-.. .......+-|+.|.|||++...+|+...|+||+||++|-|++|.+||...+. ..+..-.....+.+. .+.
T Consensus 214 t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg---~aispgMk~rI~~gq-y~F 286 (400)
T KOG0604|consen 214 TQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---LAISPGMKRRIRTGQ-YEF 286 (400)
T ss_pred cCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC---ccCChhHHhHhhccC-ccC
Confidence 432 2334457889999999999999999999999999999999999999964332 111111111111111 011
Q ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 671 VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 671 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+.-..-.+...+++...|..+|.+|.|+.+++..
T Consensus 287 -----P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 287 -----PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred -----CChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 111111223555677888889999999999999763
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=5e-19 Score=193.17 Aligned_cols=190 Identities=21% Similarity=0.208 Sum_probs=143.0
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++.|.+...+|.|+|+.|-.+.. .+++..+||++.+.. .+-.+|+.++... +||||+++.+.+.++.+.++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 56788889999999999999984 568899999997652 2233567665555 79999999999999999999999
Q ss_pred ccCCCChhhh--------------------------------------------------hccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
++.++-|.+. |+|||.++..... ..
T Consensus 397 ~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-----~~ 471 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-----CD 471 (612)
T ss_pred hccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-----hc
Confidence 9998876543 2377777765322 22
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
..+-|..|.|||++....|++++|+||||++||||++|+.|+...... ..+......+.. ..
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------~ei~~~i~~~~~------------s~ 533 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------IEIHTRIQMPKF------------SE 533 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------HHHHHhhcCCcc------------cc
Confidence 345688999999999999999999999999999999999998643322 111111111111 12
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.-.....+|+.+||+.||.+||+|+++..
T Consensus 534 ~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 534 CVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 22345667888999999999999999976
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.6e-18 Score=190.78 Aligned_cols=209 Identities=18% Similarity=0.273 Sum_probs=128.7
Q ss_pred hccccccccccccCCceeEEEEEe-----------------cCCcEEEEEEecccCccchHh--------------HHHH
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-----------------QDGQEIAVKRLSKASGQGQEE--------------FMNE 541 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~l~~~~~~~~~~--------------f~~E 541 (760)
..++|++.++||+|+||.||+|.. ..++.||||++........++ +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999963 235679999987543322333 3457
Q ss_pred HHHHhcCCCCcc-----ceeeeEEEe--------CCeeEEEEeccCCCChhhhh--------------------------
Q 004345 542 VMVISNLQHRNL-----VRLLGCCVE--------REENMLIYEYMPNKSLDSFL-------------------------- 582 (760)
Q Consensus 542 ~~~l~~l~H~nI-----v~l~g~~~~--------~~~~~lV~Ey~~~gsL~~~L-------------------------- 582 (760)
+.++.+++|.++ ++++++|.. .+..+|||||+++++|.++|
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777776654 778888754 35689999999998885432
Q ss_pred ------------------------------------------------ccccceeEecCCCcccccceeeeeccccCccc
Q 004345 583 ------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEY 614 (760)
Q Consensus 583 ------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~ 614 (760)
+|||+++........ ......+++.|+|||.
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aPE~ 381 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPPEE 381 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeChhh
Confidence 288888654322111 1112234789999998
Q ss_pred cccCCC----------------------CccchhHHHHHHHHHHHhCCC-CCCCCcc---c-ccccHHHHHHHhccCCCc
Q 004345 615 AMEGRF----------------------SEKSDVFSFGVLLLEIVSGRK-NTSFYHE---E-FELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 615 ~~~~~~----------------------s~ksDVwSfGv~l~ElltG~~-p~~~~~~---~-~~~~~~~~~~~~~~~~~~ 667 (760)
+..... ..+.||||+||+++||++|.. |+..... + .........|+.......
T Consensus 382 l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~ 461 (507)
T PLN03224 382 LVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKY 461 (507)
T ss_pred hcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCC
Confidence 754321 235799999999999999875 5432110 0 000000001111111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCc---CCCCCHHHHHH
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFV---KDRPNMPTVVS 710 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P---~~RPt~~ev~~ 710 (760)
+-.. .........+++.+++..+| .+|+|++|+++
T Consensus 462 ----~~~~----~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 462 ----DFSL----LDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred ----Cccc----ccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0000 01112445666777777655 78999999976
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.4e-19 Score=201.04 Aligned_cols=157 Identities=25% Similarity=0.372 Sum_probs=132.2
Q ss_pred HHHHHHhccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEe
Q 004345 487 FEELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE 562 (760)
Q Consensus 487 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~ 562 (760)
..++....++|+++++||+|+||.|...+.+ +++.+|.|++++- ......-|..|-.+|..-+.+=||.|+-.|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 4566777889999999999999999999964 6788999999863 23445678999999998889999999999999
Q ss_pred CCeeEEEEeccCCCChhhhh--------------------------------------------------ccccceeEec
Q 004345 563 REENMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFG 592 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~ 592 (760)
+.++|+|||||+||+|-.+| +|||.+-.+.
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcC
Confidence 99999999999999997653 4888876654
Q ss_pred CCCcccccceeeeeccccCccccc----c-CCCCccchhHHHHHHHHHHHhCCCCCC
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAM----E-GRFSEKSDVFSFGVLLLEIVSGRKNTS 644 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~s~ksDVwSfGv~l~ElltG~~p~~ 644 (760)
.+. .......+|||-|++||++. + +.|+..+|.||+||++|||+.|..||.
T Consensus 227 ~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 227 ADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred CCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 222 23344578999999999986 2 579999999999999999999999996
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.4e-18 Score=170.15 Aligned_cols=151 Identities=24% Similarity=0.386 Sum_probs=126.4
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~l 568 (760)
.++|.++.+||+|+|.+|.++++ ++.+.+|+|++++. ..+..+-...|-.+..+- +||.+|.|..++..+..++.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 46789999999999999999995 46788999999864 334555677788887666 79999999999999999999
Q ss_pred EEeccCCCChhhh--------------------------------------------------hccccceeEecCCCccc
Q 004345 569 IYEYMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQA 598 (760)
Q Consensus 569 V~Ey~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~ 598 (760)
|.||+++|+|--+ |.|+|+++.--. ...
T Consensus 329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~--~gd 406 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG--PGD 406 (593)
T ss_pred EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCC--CCc
Confidence 9999999998433 248888875322 223
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFY 646 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~ 646 (760)
.+...+||+.|+|||.+++..|...+|.|++||+++||+.|+.||+..
T Consensus 407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 455689999999999999999999999999999999999999999754
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.9e-18 Score=192.71 Aligned_cols=193 Identities=23% Similarity=0.333 Sum_probs=142.1
Q ss_pred cccccccccCCcee-EEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEeccC
Q 004345 497 FQLANKLGQGGFGP-VYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 497 ~~~~~~lG~G~~g~-Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
|...+.+|.|+-|+ ||+|..+ ++.||||++-. ....-..+|+..|..- +|||||++++.-.+....||..|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 45557899999875 7999985 78999998843 2344567999999877 59999999999888889999999884
Q ss_pred CCChhhh-----------------------------------------------------------hccccceeEecCCC
Q 004345 575 NKSLDSF-----------------------------------------------------------LFDFGLARIFGGNQ 595 (760)
Q Consensus 575 ~gsL~~~-----------------------------------------------------------L~DFGla~~~~~~~ 595 (760)
-+|+++ |+|||+++.+..+.
T Consensus 587 -~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 587 -CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred -hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 344333 35999999887654
Q ss_pred cc-cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhC-CCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 596 DQ-AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSG-RKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 596 ~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
.. .......||-+|+|||++....-+.++||+|+||++|..++| .+||...-..+. ++ .....-...
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-NI-------l~~~~~L~~--- 734 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-NI-------LTGNYTLVH--- 734 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh-hh-------hcCccceee---
Confidence 43 345667899999999999998888899999999999999996 889863222110 10 001100011
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+... .++ +..+++.+++.++|..||++.+|+.
T Consensus 735 -L~~~--~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 735 -LEPL--PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred -eccC--chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1111 111 6678888999999999999999974
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-17 Score=189.70 Aligned_cols=207 Identities=18% Similarity=0.289 Sum_probs=123.9
Q ss_pred hccccccccccccCCceeEEEEEec-C----CcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeE------EE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-D----GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGC------CV 561 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~----~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~------~~ 561 (760)
..++|++.++||+|+||.||+|++. + +..||||++.... ..+.+.+|. +....|.+++.++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e~--l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNER--VRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHHH--HHhhchhhHHHHHHhhhcccccc
Confidence 4578999999999999999999965 4 6899999886432 122222221 122223333322221 24
Q ss_pred eCCeeEEEEeccCCCChhhh------------------------------------------------------------
Q 004345 562 EREENMLIYEYMPNKSLDSF------------------------------------------------------------ 581 (760)
Q Consensus 562 ~~~~~~lV~Ey~~~gsL~~~------------------------------------------------------------ 581 (760)
.+.+.+||+||+++++|.++
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N 285 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN 285 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence 56678999999999987532
Q ss_pred -----------hccccceeEecCCCcccccceeeeeccccCccccccC----------------------CCCccchhHH
Q 004345 582 -----------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG----------------------RFSEKSDVFS 628 (760)
Q Consensus 582 -----------L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~s~ksDVwS 628 (760)
|+|||+|+.+...... ......+++.|||||.+... .++.++||||
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred EEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 1399999865432222 22346789999999965322 2445679999
Q ss_pred HHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC-C---ccccccccc----cCCC--CHHHHHHHHHHHHhcccCC
Q 004345 629 FGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN-N---VIDLVDPLI----SESG--FKMEIIRCVNVGLLCVQEF 698 (760)
Q Consensus 629 fGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~d~~l----~~~~--~~~~~~~~~~l~~~Cl~~~ 698 (760)
|||+||||+++..+.+.. +..........+ . ....+.+.. .... .........+++.+|++.|
T Consensus 365 lGviL~el~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSN-------LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred HHHHHHHHHhCcCCCchH-------HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 999999999977654311 111000000000 0 000011100 0000 0001123457899999999
Q ss_pred cCCCCCHHHHHHH
Q 004345 699 VKDRPNMPTVVSM 711 (760)
Q Consensus 699 P~~RPt~~ev~~~ 711 (760)
|++|||+.|+++.
T Consensus 438 P~kR~ta~e~L~H 450 (566)
T PLN03225 438 GRQRISAKAALAH 450 (566)
T ss_pred cccCCCHHHHhCC
Confidence 9999999999873
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.3e-19 Score=170.96 Aligned_cols=216 Identities=20% Similarity=0.360 Sum_probs=144.7
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecc--cCccchHhHHHHHHHHhcCCCCccceeeeEEEeC--------
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSK--ASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER-------- 563 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~--~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~-------- 563 (760)
+.|+-..+||+|.||.||+|+.. .++.||+|+.-- .....-...++|+++|..|+|+|++.++..|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34555689999999999999954 577789886532 2223345678999999999999999999998643
Q ss_pred CeeEEEEeccCCCChhhh---------------------------------------------------hccccceeEec
Q 004345 564 EENMLIYEYMPNKSLDSF---------------------------------------------------LFDFGLARIFG 592 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~~ 592 (760)
...+||+.+|+. +|.-+ |+|||+++.+.
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence 247999999975 22221 25999998775
Q ss_pred CCCcc--cccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHh-----ccC
Q 004345 593 GNQDQ--AATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL-----WND 664 (760)
Q Consensus 593 ~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~-----~~~ 664 (760)
..... ......+-|..|++||.+.+. .|+++.|||.-||++.||.||.+.+....+.....++...... |.+
T Consensus 176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~ 255 (376)
T KOG0669|consen 176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPN 255 (376)
T ss_pred cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCC
Confidence 33222 223345669999999999864 5999999999999999999999887654444444444332211 111
Q ss_pred ---CCccccc--cccccCCC--CHHHH------HHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 665 ---NNVIDLV--DPLISESG--FKMEI------IRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 665 ---~~~~~~~--d~~l~~~~--~~~~~------~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
-.+.+.+ .|...+.. -...+ ...++++...+..||.+||++++++..
T Consensus 256 ~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 256 VDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 1111111 11111110 01111 256677778889999999999998763
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.8e-18 Score=188.04 Aligned_cols=205 Identities=23% Similarity=0.362 Sum_probs=152.5
Q ss_pred HhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
.+.++|+++..+|.|.||.|||++. ..++..|||.++-.......-...|+-+++.-+|||||.++|.+......++.|
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 3456788899999999999999995 468899999998666666677788999999999999999999999999999999
Q ss_pred eccCCCChhhh--------------------------------------------------hccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~ 600 (760)
|||.+|+|++. |+|||.+..+. ......
T Consensus 92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqit--ati~Kr 169 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT--ATIAKR 169 (829)
T ss_pred EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhh--hhhhhh
Confidence 99999999874 24888876553 223345
Q ss_pred ceeeeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 601 KRLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
....||+.|||||+.. .+.|..++|||+.|++..|+---..|....+.-. +...+.. .. .-.+.+++
T Consensus 170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr-------~l~LmTk-S~--~qpp~lkD 239 (829)
T KOG0576|consen 170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR-------ALFLMTK-SG--FQPPTLKD 239 (829)
T ss_pred hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH-------HHHHhhc-cC--CCCCcccC
Confidence 5688999999999874 5669999999999999999987666653222211 1011111 00 00122222
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.. .-.+-+-+++..|+-.+|++||++..+++
T Consensus 240 k~--kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 240 KT--KWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred Cc--cchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 21 12244566777889999999999987654
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-18 Score=183.15 Aligned_cols=218 Identities=20% Similarity=0.283 Sum_probs=158.4
Q ss_pred ccccccccccCCceeEEEEEecCCc-EEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQDGQ-EIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~~~~-~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
+++.+..||-|+||.|-+...+... .+|+|++++. ....+++...|-.+|...+.|.||+||--|.+....|++||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 4455678999999999999876443 4899988754 34556788999999999999999999999999999999999
Q ss_pred ccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
-|-||.|...| .|||+|+.+..+. .+.
T Consensus 501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~---KTw 577 (732)
T KOG0614|consen 501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR---KTW 577 (732)
T ss_pred hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCC---cee
Confidence 99999886653 3999999886443 456
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
..+||+.|.|||++.+..++.++|.||+|++++||++|++||...+.-...+++- ..-+..+ .+.
T Consensus 578 TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL------kGid~i~---------~Pr 642 (732)
T KOG0614|consen 578 TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL------KGIDKIE---------FPR 642 (732)
T ss_pred eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH------hhhhhhh---------ccc
Confidence 7899999999999999999999999999999999999999997443321111110 0001111 111
Q ss_pred HHHHHHHHHHHhcccCCcCCCCC-----HHHHHHH--Hhc------cccCCCCCCCCceeecc
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPN-----MPTVVSM--LNS------EIKDLPAAKQPAFTVRR 731 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~~--L~~------~~~~~~~p~~p~~~~~~ 731 (760)
.-.....+++.+....+|.+|.- +.+|-+. +++ ..+.+++|-.|......
T Consensus 643 ~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~pt 705 (732)
T KOG0614|consen 643 RITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPT 705 (732)
T ss_pred ccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcc
Confidence 22234556666666789999975 4555442 222 12356666666654433
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-17 Score=159.66 Aligned_cols=209 Identities=18% Similarity=0.380 Sum_probs=148.4
Q ss_pred ccccccccccccCCceeEEEEE-ecCCcEEEEEEecccCccchHhHHHHHHHHhcCC-CCccceeeeEEEeCC--eeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVERE--ENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~--~~~lV 569 (760)
.++|++.+++|+|-|+.||.|. ..+.+.++||++++. ..+.+.+|++||..|. ||||++|+++..+.. .+.||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 4679999999999999999998 567889999999754 3567889999999997 999999999987754 45799
Q ss_pred EeccCCCChhhh------------------------------------------------hccccceeEecCCCcccccc
Q 004345 570 YEYMPNKSLDSF------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 570 ~Ey~~~gsL~~~------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
+||+.+.+...+ |+|+|||.......+..
T Consensus 114 FE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYn--- 190 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN--- 190 (338)
T ss_pred hhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceee---
Confidence 999999876543 24999998876555432
Q ss_pred eeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC---------------C
Q 004345 602 RLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND---------------N 665 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~---------------~ 665 (760)
-.+.+..|.-||.+..- .|+..-|+|||||+|.+|+..+.||...++..+ .++..+ +.+.. .
T Consensus 191 VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~D-QLVkIa-kVLGt~el~~Yl~KY~i~Ldp 268 (338)
T KOG0668|consen 191 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD-QLVKIA-KVLGTDELYAYLNKYQIDLDP 268 (338)
T ss_pred eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHH-HHHHHH-HHhChHHHHHHHHHHccCCCh
Confidence 23567788999998764 478889999999999999999999864443321 111111 11111 1
Q ss_pred Ccccccccc--------ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 666 NVIDLVDPL--------ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 666 ~~~~~~d~~--------l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+++... +..+.......+.++++-+.+..|-.+|||++|...
T Consensus 269 ~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 269 QFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred hHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 111111110 011100111255667777788899999999998754
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.9e-16 Score=155.64 Aligned_cols=159 Identities=33% Similarity=0.590 Sum_probs=129.7
Q ss_pred cccCCceeEEEEEecC-CcEEEEEEecccCcc-chHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCCChhh
Q 004345 503 LGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQ-GQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDS 580 (760)
Q Consensus 503 lG~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~ 580 (760)
||+|.+|.||++.... ++.+++|++...... ..+.+.+|+..+++++|++|+++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 889999998754332 35789999999999999999999999999999999999999899877
Q ss_pred hh----------------------------------------------------ccccceeEecCCCcccccceeeeecc
Q 004345 581 FL----------------------------------------------------FDFGLARIFGGNQDQAATKRLVGTYG 608 (760)
Q Consensus 581 ~L----------------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~~ 608 (760)
++ .|||.+........ ......+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~ 158 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPA 158 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCC
Confidence 63 14555544322110 1222456788
Q ss_pred ccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHH
Q 004345 609 YMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRC 687 (760)
Q Consensus 609 y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 687 (760)
|++||..... ..+.+.|+|++|++++|| ..+
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------~~~ 190 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------PEL 190 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------HHH
Confidence 9999999877 888999999999999999 456
Q ss_pred HHHHHhcccCCcCCCCCHHHHHHH
Q 004345 688 VNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 688 ~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.+++..|++.+|++||++.++++.
T Consensus 191 ~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 191 KDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHhhCCcccCcCHHHHhhC
Confidence 778889999999999999999864
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-17 Score=162.93 Aligned_cols=202 Identities=22% Similarity=0.308 Sum_probs=141.5
Q ss_pred ccccccccCCceeEEEEEecCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 498 QLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 498 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
.+..+|.+...|..|+|+++ |..+++|+++-. .....++|..|.-.|+-+.||||+.++|.|....++.++..||+.
T Consensus 193 nl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 34567888999999999997 556677877633 334456799999999999999999999999999999999999999
Q ss_pred CChhhhhc-------c------c------cceeE--------------------------ec-CCCcc-cccceeeeecc
Q 004345 576 KSLDSFLF-------D------F------GLARI--------------------------FG-GNQDQ-AATKRLVGTYG 608 (760)
Q Consensus 576 gsL~~~L~-------D------F------Gla~~--------------------------~~-~~~~~-~~~~~~~gt~~ 608 (760)
|+|+..|. | | |++-+ +. .+... .......-.+.
T Consensus 272 gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pa 351 (448)
T KOG0195|consen 272 GSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPA 351 (448)
T ss_pred hHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCcc
Confidence 99998863 1 0 11100 00 00000 00001123578
Q ss_pred ccCccccccCCCC---ccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 609 YMSPEYAMEGRFS---EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 609 y~aPE~~~~~~~s---~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
||+||.++..+-+ .++|+|||.++||||.|...||.....-+ .. .++.-..++...++....
T Consensus 352 wmspealqrkped~n~raadmwsfaillwel~trevpfadlspme------cg---------mkialeglrv~ippgis~ 416 (448)
T KOG0195|consen 352 WMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPME------CG---------MKIALEGLRVHIPPGISR 416 (448)
T ss_pred cCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchh------hh---------hhhhhccccccCCCCccH
Confidence 9999999876533 57899999999999999999986433211 00 111111222233334445
Q ss_pred HHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 686 RCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
.+.+++.-|+.+||.+||.++.|+-.|++.
T Consensus 417 hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 417 HMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred HHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 677788889999999999999999999875
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.2e-17 Score=154.30 Aligned_cols=156 Identities=26% Similarity=0.404 Sum_probs=123.0
Q ss_pred HHHHHhccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc-CccchHhHHHHHHHHhc-CCCCccceeeeEEEeCC
Q 004345 488 EELANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA-SGQGQEEFMNEVMVISN-LQHRNLVRLLGCCVERE 564 (760)
Q Consensus 488 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~-l~H~nIv~l~g~~~~~~ 564 (760)
+.+..+.+.+..+..||+|++|.|-+-++ ++|+..|||++... ..+.+++.++|+.+..+ ...|.+|.++|......
T Consensus 39 ~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 39 RNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG 118 (282)
T ss_pred CccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence 33445556666778999999999998884 68999999999743 45667789999997655 47999999999999999
Q ss_pred eeEEEEeccCCCChhhh-------------------------------------------------------hcccccee
Q 004345 565 ENMLIYEYMPNKSLDSF-------------------------------------------------------LFDFGLAR 589 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~-------------------------------------------------------L~DFGla~ 589 (760)
..++.||.|. -||+.+ ++|||++-
T Consensus 119 dvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 119 DVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred cEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccce
Confidence 9999999984 345443 25999998
Q ss_pred EecCCCcccccceeeeeccccCcccccc----CCCCccchhHHHHHHHHHHHhCCCCCCCCc
Q 004345 590 IFGGNQDQAATKRLVGTYGYMSPEYAME----GRFSEKSDVFSFGVLLLEIVSGRKNTSFYH 647 (760)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~ksDVwSfGv~l~ElltG~~p~~~~~ 647 (760)
.+.+ ........|--.|||||.+.. ..|+.|+||||+|+++.||.+++.|++...
T Consensus 198 ~L~d---SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 198 YLVD---SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred eehh---hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 7632 222223467789999999853 369999999999999999999999987443
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.8e-16 Score=156.49 Aligned_cols=147 Identities=36% Similarity=0.602 Sum_probs=122.5
Q ss_pred cccccccccCCceeEEEEEecC-CcEEEEEEecccCcc-chHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 497 FQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQ-GQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
|++.+.||+|++|.||++.... ++.+|+|.+...... ..+.+.+|++.+.+++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567899999999999999764 889999999765444 57789999999999999999999999999999999999999
Q ss_pred CCChhhhh---------------------------------------------------ccccceeEecCCCccccccee
Q 004345 575 NKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 575 ~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
+++|.+++ +|||++........ ......
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~~~~~~ 159 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-ALLKTV 159 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-ccccce
Confidence 98887652 38888876643320 112335
Q ss_pred eeeccccCcccc-ccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 004345 604 VGTYGYMSPEYA-MEGRFSEKSDVFSFGVLLLEIVSGRKNTS 644 (760)
Q Consensus 604 ~gt~~y~aPE~~-~~~~~s~ksDVwSfGv~l~ElltG~~p~~ 644 (760)
.++..|++||.. ....++.++|||+||++++||++|+.||+
T Consensus 160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 678899999998 66778889999999999999999999985
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.7e-16 Score=164.09 Aligned_cols=86 Identities=20% Similarity=0.362 Sum_probs=68.5
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCC-----C---CccceeeeEEEe--
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-----H---RNLVRLLGCCVE-- 562 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-----H---~nIv~l~g~~~~-- 562 (760)
.++|.+.++||-|.|++||++.. ++.+.||+|+.+.. ....+..+.|+++|++++ | .+||+|++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 36899999999999999999984 56788999998643 345667889999999883 3 379999999975
Q ss_pred --CCeeEEEEeccCCCChhhh
Q 004345 563 --REENMLIYEYMPNKSLDSF 581 (760)
Q Consensus 563 --~~~~~lV~Ey~~~gsL~~~ 581 (760)
+.+.++|+|++ |.+|..+
T Consensus 156 pNG~HVCMVfEvL-GdnLLkl 175 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKL 175 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHH
Confidence 45889999998 4444443
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.64 E-value=4e-16 Score=168.33 Aligned_cols=152 Identities=26% Similarity=0.400 Sum_probs=125.2
Q ss_pred cccccccccccCCceeEEEEE-ecCCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
.-|..++.||-|+||.|.++. .++...+|.|.|++.+. ......+.|-.||+.-+.+=||+|+-.|.+++.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 347888999999999999997 55677899999987643 33456788999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCc----
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD---- 596 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~---- 596 (760)
||++||++-.+| .||||+.-+....+
T Consensus 709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYY 788 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 788 (1034)
T ss_pred eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccc
Confidence 999999987653 39999864421100
Q ss_pred ------------------------------------ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCC
Q 004345 597 ------------------------------------QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640 (760)
Q Consensus 597 ------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~ 640 (760)
.......+||..|+|||++....++.-+|.||.||+||||+.|+
T Consensus 789 q~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~ 868 (1034)
T KOG0608|consen 789 QEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQ 868 (1034)
T ss_pred cCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCC
Confidence 00112357999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 004345 641 KNTSFY 646 (760)
Q Consensus 641 ~p~~~~ 646 (760)
.||-..
T Consensus 869 ~pf~~~ 874 (1034)
T KOG0608|consen 869 PPFLAD 874 (1034)
T ss_pred CCccCC
Confidence 998543
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.3e-16 Score=167.09 Aligned_cols=156 Identities=22% Similarity=0.322 Sum_probs=121.9
Q ss_pred cCHHHHHHhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCC------CCccceee
Q 004345 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ------HRNLVRLL 557 (760)
Q Consensus 485 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~------H~nIv~l~ 557 (760)
+.+.|+. -++|.+....|+|-|++|.+|... .++.||||+|.+.. .-.+.=++|+++|++|+ .-|+++|+
T Consensus 424 v~igE~L--D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~ 500 (752)
T KOG0670|consen 424 VRIGELL--DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLF 500 (752)
T ss_pred Eehhhhh--cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence 3344443 367999999999999999999954 57899999997542 23445678999999995 34899999
Q ss_pred eEEEeCCeeEEEEeccCCCChhhh------------------------------------------------------hc
Q 004345 558 GCCVEREENMLIYEYMPNKSLDSF------------------------------------------------------LF 583 (760)
Q Consensus 558 g~~~~~~~~~lV~Ey~~~gsL~~~------------------------------------------------------L~ 583 (760)
-.|...+++|||+|-+. -+|.+. ||
T Consensus 501 r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLC 579 (752)
T KOG0670|consen 501 RHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLC 579 (752)
T ss_pred HHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeec
Confidence 99999999999999763 233332 36
Q ss_pred cccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHE 648 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~ 648 (760)
|||.|.....++- +...-+..|.|||++.+.+|+...|+||.||+||||.||+.-|+....
T Consensus 580 DfGSA~~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN 640 (752)
T KOG0670|consen 580 DFGSASFASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN 640 (752)
T ss_pred cCccccccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence 9999987654332 123346689999999999999999999999999999999998875443
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.6e-16 Score=154.28 Aligned_cols=211 Identities=18% Similarity=0.250 Sum_probs=138.9
Q ss_pred ccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCC-----eeEEEEe
Q 004345 500 ANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE-----ENMLIYE 571 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~-----~~~lV~E 571 (760)
.+.||-|+||.||..+.+ +|+.||.|++.+. +-...+.+.+|+++|.-++|.|++..++.-.... +.|+|+|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 478999999999999864 7899999998643 2234568999999999999999999988765433 3456666
Q ss_pred ccCCCChhhh--------------------------------------------------hccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
.|. .+|... |+|||+|+.....+.. ...
T Consensus 138 LmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~-hMT 215 (449)
T KOG0664|consen 138 LMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL-NMT 215 (449)
T ss_pred HHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhh-hhH
Confidence 663 233322 3699999976443332 333
Q ss_pred eeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH--------HHhccCCCcccccc
Q 004345 602 RLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA--------WKLWNDNNVIDLVD 672 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~d 672 (760)
..+-|..|.|||.+.+. .|+.+.||||.||++.||+..+.-|....+-++..++... .+.--++....++.
T Consensus 216 qEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR 295 (449)
T KOG0664|consen 216 HEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLR 295 (449)
T ss_pred HHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhc
Confidence 45668899999999875 5899999999999999999888777654444333333211 11111121112221
Q ss_pred ccccCC---------CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHH
Q 004345 673 PLISES---------GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712 (760)
Q Consensus 673 ~~l~~~---------~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L 712 (760)
...+.. .....-.+.+.+.++.+..||++|.+..+.+..+
T Consensus 296 ~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 296 AGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred cCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 111100 0001112334555667889999999988887755
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.5e-15 Score=155.74 Aligned_cols=157 Identities=27% Similarity=0.504 Sum_probs=122.7
Q ss_pred HHHhccccccccccccCCceeEEEEEec----CCcEEEEEEecccCccchHhHHHHHHHHhcCC-CCccceeeeEEEeCC
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGKLQ----DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVERE 564 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~ 564 (760)
+....+.|...++||+|.|++||++++. ..+.||+|.+...+ .-....+|+++|..+. |.||+++.+++..++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 4445677899999999999999999854 36789999987543 3456889999999995 999999999999999
Q ss_pred eeEEEEeccCCCChhhh------------------------------------------------hccccceeEecCCC-
Q 004345 565 ENMLIYEYMPNKSLDSF------------------------------------------------LFDFGLARIFGGNQ- 595 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~------------------------------------------------L~DFGla~~~~~~~- 595 (760)
...+|+||+++-...++ |.|||||......+
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~ 188 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ 188 (418)
T ss_pred eeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence 99999999998776554 24999987211000
Q ss_pred ------------c-----------------------------ccccceeeeeccccCccccccC-CCCccchhHHHHHHH
Q 004345 596 ------------D-----------------------------QAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLL 633 (760)
Q Consensus 596 ------------~-----------------------------~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l 633 (760)
. ........||++|.|||++... .-++++||||-||++
T Consensus 189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~ 268 (418)
T KOG1167|consen 189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVIL 268 (418)
T ss_pred hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecccee
Confidence 0 0001124699999999998754 468899999999999
Q ss_pred HHHHhCCCCCCCCcc
Q 004345 634 LEIVSGRKNTSFYHE 648 (760)
Q Consensus 634 ~ElltG~~p~~~~~~ 648 (760)
+-+++++.||....+
T Consensus 269 Lslls~~~PFf~a~d 283 (418)
T KOG1167|consen 269 LSLLSRRYPFFKAKD 283 (418)
T ss_pred ehhhccccccccCcc
Confidence 999999999865433
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.9e-15 Score=160.82 Aligned_cols=146 Identities=23% Similarity=0.394 Sum_probs=114.2
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC--------ccchHhHHHHHHHHhcCC---CCccceeeeEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--------GQGQEEFMNEVMVISNLQ---HRNLVRLLGCCVE 562 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--------~~~~~~f~~E~~~l~~l~---H~nIv~l~g~~~~ 562 (760)
.+|..++.+|+|+||.|++|.++ +...|+||.+.+.. ....-..-.|+.||+.|+ |+||+|++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 34888999999999999999975 46789999987542 112224567999999997 9999999999999
Q ss_pred CCeeEEEEeccC-CCChhhhh--------------------------------------------------ccccceeEe
Q 004345 563 REENMLIYEYMP-NKSLDSFL--------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 563 ~~~~~lV~Ey~~-~gsL~~~L--------------------------------------------------~DFGla~~~ 591 (760)
++.+||+||--. +-+|.++| +|||.|...
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ 720 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYT 720 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhh
Confidence 999999999654 44666653 256655443
Q ss_pred cCCCcccccceeeeeccccCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCC
Q 004345 592 GGNQDQAATKRLVGTYGYMSPEYAMEGRFS-EKSDVFSFGVLLLEIVSGRKNTS 644 (760)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDVwSfGv~l~ElltG~~p~~ 644 (760)
... .....+||..|.|||++.+.+|- ..-|||++|++||.++....|+.
T Consensus 721 ksg----pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 721 KSG----PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cCC----CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 221 23357899999999999988875 56799999999999998888864
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-14 Score=146.76 Aligned_cols=212 Identities=20% Similarity=0.251 Sum_probs=142.2
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCC------e
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE------E 565 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~------~ 565 (760)
.+|.-+..+|.|.- .|-.+... .+++||+|++... .....++..+|..++..++|+||++++.++.... +
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46666788888887 55555532 5789999988643 3345677889999999999999999999997654 5
Q ss_pred eEEEEeccCCCChhhh------------------------------------------------hccccceeEecCCCcc
Q 004345 566 NMLIYEYMPNKSLDSF------------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~------------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
.|+|||||. .+|.+. +.|||+|+.-...
T Consensus 96 ~y~v~e~m~-~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~--- 171 (369)
T KOG0665|consen 96 VYLVMELMD-ANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD--- 171 (369)
T ss_pred HHHHHHhhh-hHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc---
Confidence 699999995 344433 1399999864221
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCccccc----------------ccHHHHHHHh
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFE----------------LTLLGYAWKL 661 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~----------------~~~~~~~~~~ 661 (760)
-.....+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|.....-++ ..+...++..
T Consensus 172 ~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~y 251 (369)
T KOG0665|consen 172 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNY 251 (369)
T ss_pred cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHH
Confidence 234457889999999999998899999999999999999999987652111000 0011111111
Q ss_pred ccCCC------ccccc-ccccc--CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 662 WNDNN------VIDLV-DPLIS--ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 662 ~~~~~------~~~~~-d~~l~--~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.+... ..+.+ |.... -+.+......+.+++.++|-.||++|.+++++++.
T Consensus 252 v~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 252 VENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 11000 00111 11000 01112233455678889999999999999999884
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.6e-14 Score=136.89 Aligned_cols=114 Identities=15% Similarity=0.148 Sum_probs=77.4
Q ss_pred ccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC
Q 004345 585 FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND 664 (760)
Q Consensus 585 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 664 (760)
||+++...... ..||+.|||||++.+..++.|+|||||||++|||++|+.|+...... .............
T Consensus 53 fG~~~~~~~~~-------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~--~~~~~~~~~~~~~ 123 (176)
T smart00750 53 DGSVAFKTPEQ-------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL--SAILEILLNGMPA 123 (176)
T ss_pred ccceEeecccc-------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh--cHHHHHHHHHhcc
Confidence 89888754321 25789999999999999999999999999999999999998532211 1111111111100
Q ss_pred CCccccccccccCCCCHHHH---HHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 665 NNVIDLVDPLISESGFKMEI---IRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 665 ~~~~~~~d~~l~~~~~~~~~---~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
.. +. ........ ..+.+++.+||+.+|++||++.|+++.+...
T Consensus 124 ~~------~~--~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 124 DD------PR--DRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred CC------cc--ccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 00 00 00011111 2588999999999999999999999988654
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.4e-13 Score=135.48 Aligned_cols=205 Identities=20% Similarity=0.313 Sum_probs=141.1
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeE-EEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGC-CVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~-~~~~~~~~lV~E 571 (760)
+.|.+.+.||+|.||.+-++.++ ..+.+++|.+.+. ....++|.+|..---.| .|.||+.-+++ |...+.+..++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 45788899999999999999975 4667899987644 34577899998765555 59999998875 556677889999
Q ss_pred ccCCCChhhh---------------------------------------------------hccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~~ 600 (760)
|+|.|+|..- |+|||+.+..+...
T Consensus 103 ~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV----- 177 (378)
T KOG1345|consen 103 FAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV----- 177 (378)
T ss_pred cCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCcee-----
Confidence 9999999753 25888887543221
Q ss_pred ceeeeeccccCccccccC-----CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 601 KRLVGTYGYMSPEYAMEG-----RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~-----~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
.....+..|.+||..... ...+.+|||.||++++.++||+.|+...... +..-|-+..|..+.....-+..
T Consensus 178 ~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~---d~~Y~~~~~w~~rk~~~~P~~F- 253 (378)
T KOG1345|consen 178 KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM---DKPYWEWEQWLKRKNPALPKKF- 253 (378)
T ss_pred hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc---CchHHHHHHHhcccCccCchhh-
Confidence 122345679999987532 2567899999999999999999999732222 2223334445444433222111
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
... .++++++-.+-+.++|++|-...++.++...
T Consensus 254 -~~f----s~~a~r~Fkk~lt~~~~drcki~~~kk~rk~ 287 (378)
T KOG1345|consen 254 -NPF----SEKALRLFKKSLTPRFKDRCKIWTAKKMRKC 287 (378)
T ss_pred -ccc----CHHHHHHHHHhcCCcccccchhHHHHHHHHH
Confidence 111 1334445556788999999887777776544
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.3e-13 Score=166.47 Aligned_cols=90 Identities=21% Similarity=0.236 Sum_probs=63.2
Q ss_pred eeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHH
Q 004345 603 LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 682 (760)
..||+.|||||++....++.++|||||||+||||++|..|+.... ........ ..+.+.. ..
T Consensus 175 ~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----~~~~~~~~---------~~~~~~~-----~~ 236 (793)
T PLN00181 175 AMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----RTMSSLRH---------RVLPPQI-----LL 236 (793)
T ss_pred cCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----HHHHHHHH---------hhcChhh-----hh
Confidence 357889999999999999999999999999999999887753110 00000000 0111111 11
Q ss_pred HHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 683 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.......++.+||+.+|.+||+|.||++
T Consensus 237 ~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 237 NWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred cCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 2234567788999999999999999986
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.3e-12 Score=141.58 Aligned_cols=165 Identities=22% Similarity=0.318 Sum_probs=115.6
Q ss_pred HhcCCCCccceeeeEEEeCCeeEEEEeccCCCChhhhh------------------------------------------
Q 004345 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL------------------------------------------ 582 (760)
Q Consensus 545 l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L------------------------------------------ 582 (760)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 45789999999999999999999999999999998874
Q ss_pred ----------ccccceeEecCCCcccccceeeeeccccCccccccCC-------CCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 583 ----------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-------FSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 583 ----------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
+|||+.................-..-|.|||.+.... .+.+.||||||++++|+++.+.||+.
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~ 160 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL 160 (484)
T ss_pred eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence 3888877653211111111223446799999997641 46789999999999999999999986
Q ss_pred Ccccccc-cHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 646 YHEEFEL-TLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 646 ~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
....... .++..+.. .....+.|.+.... +....++.++..||..+|++||++++|-..++...
T Consensus 161 ~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 161 RNLVEDPDEIILRVKK-----GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred ccccCChHHHHHHHHh-----cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 4443322 12222111 11122223222111 22236888999999999999999999999887654
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=9.9e-12 Score=134.17 Aligned_cols=133 Identities=18% Similarity=0.223 Sum_probs=96.7
Q ss_pred HHhccccccccccccCCceeEEEEEec--CCcEEEEEEeccc-----CccchHhHHHHHHHHhcCCCCccce-eeeEEEe
Q 004345 491 ANATNNFQLANKLGQGGFGPVYKGKLQ--DGQEIAVKRLSKA-----SGQGQEEFMNEVMVISNLQHRNLVR-LLGCCVE 562 (760)
Q Consensus 491 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~nIv~-l~g~~~~ 562 (760)
....++|++.+.||+|+||+||+|... +++.||||++... .....+.|.+|+++|++++|+|++. +++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---- 89 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---- 89 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----
Confidence 344578999999999999999999864 5677899987532 1123556999999999999999985 443
Q ss_pred CCeeEEEEeccCCCChhhh--------------------------------------------hccccceeEecCCCccc
Q 004345 563 REENMLIYEYMPNKSLDSF--------------------------------------------LFDFGLARIFGGNQDQA 598 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~--------------------------------------------L~DFGla~~~~~~~~~~ 598 (760)
.+..+|||||+++++|... |+|||+|+.+.......
T Consensus 90 ~~~~~LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~ 169 (365)
T PRK09188 90 TGKDGLVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALY 169 (365)
T ss_pred cCCcEEEEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchh
Confidence 2467999999999988532 24999999775432111
Q ss_pred c------cceeeeeccccCccccccCC------CCccchhH
Q 004345 599 A------TKRLVGTYGYMSPEYAMEGR------FSEKSDVF 627 (760)
Q Consensus 599 ~------~~~~~gt~~y~aPE~~~~~~------~s~ksDVw 627 (760)
. .....+++.|+|||.+...+ .+..+|-|
T Consensus 170 ~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 170 RIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred hhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 1 13467888999999986443 23346665
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.6e-10 Score=119.40 Aligned_cols=208 Identities=26% Similarity=0.391 Sum_probs=148.1
Q ss_pred cccccccccCCceeEEEEEecCCcEEEEEEecccCcc---chHhHHHHHHHHhcCCCC-ccceeeeEEEeCCeeEEEEec
Q 004345 497 FQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQ---GQEEFMNEVMVISNLQHR-NLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~---~~~~f~~E~~~l~~l~H~-nIv~l~g~~~~~~~~~lV~Ey 572 (760)
|.+.+.||.|+|+.||++... ..+++|.+...... ....|.+|+.+++.+.|+ +|+++.+.+......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566789999999999999976 88999999765332 367899999999999988 799999999777778999999
Q ss_pred cCCCChhhh------------------------------------------------------hccccceeEecCCCccc
Q 004345 573 MPNKSLDSF------------------------------------------------------LFDFGLARIFGGNQDQA 598 (760)
Q Consensus 573 ~~~gsL~~~------------------------------------------------------L~DFGla~~~~~~~~~~ 598 (760)
+.++++..+ +.|||+++.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 159 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTS 159 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccc
Confidence 999888632 13899988654333221
Q ss_pred ----ccceeeeeccccCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCccc-ccccHHHHHHHhccCCCcccc
Q 004345 599 ----ATKRLVGTYGYMSPEYAME---GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEE-FELTLLGYAWKLWNDNNVIDL 670 (760)
Q Consensus 599 ----~~~~~~gt~~y~aPE~~~~---~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 670 (760)
......|+..|+|||.+.. ...+...|+||+|++++++++|..|+...... ............... .....
T Consensus 160 ~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 238 (384)
T COG0515 160 SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-SLASP 238 (384)
T ss_pred cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-ccccc
Confidence 2356789999999999987 57889999999999999999999996533321 001111111111100 00000
Q ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 671 VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 671 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
. ...........+.+++..|+..+|..|.++.+....
T Consensus 239 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 239 L----SPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred c----CccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0 000001223456778888999999999999887763
|
|
| >PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.7e-11 Score=98.43 Aligned_cols=58 Identities=47% Similarity=1.028 Sum_probs=49.2
Q ss_pred CCCCEEEeeccCCCCcccc---cccchhhhHhhccCCCCeeeeeeec---CceeEEEecccccc
Q 004345 338 KQDGFFKLETMKVPYFAER---SSANEDKCKDQCSNNCSCKAYAYEI---GVGCMIWTHNLIDI 395 (760)
Q Consensus 338 ~~~~f~~~~~~~~p~~~~~---~~~~~~~C~~~Cl~~CsC~a~~y~~---~~gC~~~~~~l~~~ 395 (760)
.+++|++++++++|++... ...++++|++.|++||+|+||+|.+ +.+|++|+++|+|+
T Consensus 3 ~~d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~~~~~C~lW~~~L~d~ 66 (66)
T PF08276_consen 3 SGDGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLSGGGGCLLWYGDLVDL 66 (66)
T ss_pred CCCEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccCCCCEEEEEcCEeecC
Confidence 4689999999999995222 2368999999999999999999984 57799999999874
|
These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.9e-10 Score=121.60 Aligned_cols=209 Identities=22% Similarity=0.270 Sum_probs=142.5
Q ss_pred ccccccccccCCceeEEEEEecCC--cEEEEEEecccCccchHhHHHHHHHHhcCCC----CccceeeeEE-EeCCeeEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQDG--QEIAVKRLSKASGQGQEEFMNEVMVISNLQH----RNLVRLLGCC-VEREENML 568 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~~~--~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H----~nIv~l~g~~-~~~~~~~l 568 (760)
+|.+.++||+|+||.||++..... ..+|+|.-..........+..|..++..+.+ +++.++++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999996543 4788887665433333378899999998873 5899999998 47778899
Q ss_pred EEeccCCCChhhh---------------------------------------------------------hcccccee--
Q 004345 569 IYEYMPNKSLDSF---------------------------------------------------------LFDFGLAR-- 589 (760)
Q Consensus 569 V~Ey~~~gsL~~~---------------------------------------------------------L~DFGla~-- 589 (760)
||+.+ +.+|.++ |.|||+++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~ 177 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF 177 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence 99976 5555543 23999998
Q ss_pred EecCCCc----cc-c-cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc
Q 004345 590 IFGGNQD----QA-A-TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN 663 (760)
Q Consensus 590 ~~~~~~~----~~-~-~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 663 (760)
.+..... .. . .....||.+|.+++.-.+...+.+.|+||++-++.|++.|..|+........... ..+...
T Consensus 178 ~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~---~~~~~~ 254 (322)
T KOG1164|consen 178 KYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSK---FEKDPR 254 (322)
T ss_pred cccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHH---HHHHhh
Confidence 4322111 11 1 2235699999999999999999999999999999999999999854332211110 000000
Q ss_pred CCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 664 DNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 664 ~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
. ....+ .....+.+ +.++...+-..+..++|....+...|+....
T Consensus 255 ~----~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 255 K----LLTDR--FGDLKPEE---FAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred h----hcccc--ccCCChHH---HHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 0 00000 11122233 3344444445788999999999999877653
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.2e-11 Score=142.32 Aligned_cols=204 Identities=20% Similarity=0.250 Sum_probs=135.9
Q ss_pred cccccccCCceeEEEEEec-CCcEEEEEEec----cc-C-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 499 LANKLGQGGFGPVYKGKLQ-DGQEIAVKRLS----KA-S-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 499 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~----~~-~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
..+.+|.|++|.|+..... ..+..+.|... .. . ......+..|+.+-..++|+|++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 3578999999977777632 23333333322 11 1 1111225667778889999999998888877777777799
Q ss_pred ccCCCChhhhh--------------------------------------------------ccccceeEecCCCcc--cc
Q 004345 572 YMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQ--AA 599 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~--~~ 599 (760)
|+++ +|..++ +|||.+..+.-..+. ..
T Consensus 402 ~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~ 480 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHE 480 (601)
T ss_pred cccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhh
Confidence 9999 887652 489988876443333 45
Q ss_pred cceeeeeccccCccccccCCCCc-cchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSE-KSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~-ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
....+|+-.|+|||.+....|.+ ..||||.|+++..|++|+.||.....++... .. .....+.....- ...
T Consensus 481 ~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-~~--~~~~~~~~~~~~-----~~~ 552 (601)
T KOG0590|consen 481 SSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-KT--NNYSDQRNIFEG-----PNR 552 (601)
T ss_pred hcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-hh--hccccccccccC-----hHH
Confidence 56688999999999999999886 4799999999999999999987544332221 00 000000000000 000
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.......+...++.++++.||.+|.||.+|++.
T Consensus 553 ~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 553 LLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred HHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 111223456788899999999999999999873
|
|
| >cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.4e-10 Score=96.22 Aligned_cols=68 Identities=24% Similarity=0.446 Sum_probs=59.2
Q ss_pred CCCCEEEeeccCCCCcccccccchhhhHhhccC---CCCeeeeeeec-CceeEEEeccc-ccccccCCCCcceeEE
Q 004345 338 KQDGFFKLETMKVPYFAERSSANEDKCKDQCSN---NCSCKAYAYEI-GVGCMIWTHNL-IDIRKLPSGGTNLYIR 408 (760)
Q Consensus 338 ~~~~f~~~~~~~~p~~~~~~~~~~~~C~~~Cl~---~CsC~a~~y~~-~~gC~~~~~~l-~~~~~~~~~~~~~yir 408 (760)
.+.+|+++.++++|+. ...+.++|++.|++ ||+|.||+|.+ +.||++|.+++ .+++.....+.++|+|
T Consensus 7 ~~g~fl~~~~~klpd~---~~~s~~eC~~~Cl~~~~nCsC~Aya~~~~~~gC~~W~~~l~~d~~~~~~~g~~Ly~r 79 (80)
T cd00129 7 SAGTTLIKIALKIKTT---KANTADECANRCEKNGLPFSCKAFVFAKARKQCLWFPFNSMSGVRKEFSHGFDLYEN 79 (80)
T ss_pred cCCeEEEeecccCCcc---cccCHHHHHHHHhcCCCCCCceeeeccCCCCCeEEecCcchhhHHhccCCCceeEeE
Confidence 3568999999999983 23689999999999 99999999974 56899999999 9999888888999987
|
Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.2e-10 Score=117.20 Aligned_cols=88 Identities=11% Similarity=0.127 Sum_probs=71.5
Q ss_pred hccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchH---h------HHHHHHHHhcCCCCccceeeeEEEeC
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQE---E------FMNEVMVISNLQHRNLVRLLGCCVER 563 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~---~------f~~E~~~l~~l~H~nIv~l~g~~~~~ 563 (760)
..++|+..+.||.|+||.||+... ++..+|||.+........+ . |.+|+..+.+++|++|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 368899999999999999999665 5778999999754332222 2 67999999999999999999986643
Q ss_pred --------CeeEEEEeccCCCChhhh
Q 004345 564 --------EENMLIYEYMPNKSLDSF 581 (760)
Q Consensus 564 --------~~~~lV~Ey~~~gsL~~~ 581 (760)
...+|||||++|.+|.++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~ 133 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDM 133 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHh
Confidence 357899999999999664
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.6e-10 Score=112.16 Aligned_cols=150 Identities=21% Similarity=0.377 Sum_probs=119.5
Q ss_pred cccccccccccCCceeEEEEE-ecCCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
-+|++.++||+|.||.++.|+ +-++++||||.=.. .....++.-|.+..+.| ..+.|..++-+..++.+-.||+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccc--cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 468999999999999999999 56789999996332 22344667787777777 468999999888888888999998
Q ss_pred cCCCChhhhh--------------------------------------------------------ccccceeEecCCCc
Q 004345 573 MPNKSLDSFL--------------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 573 ~~~gsL~~~L--------------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+ |-||+++. .|||+|+.......
T Consensus 106 L-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred h-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 8 56776651 39999997643322
Q ss_pred -----ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCc
Q 004345 597 -----QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYH 647 (760)
Q Consensus 597 -----~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~ 647 (760)
........||.+||+-..-.+..-+.+-|.=|+|-++...+-|..||....
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 123345789999999888888888999999999999999999999997543
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.9e-10 Score=108.12 Aligned_cols=151 Identities=26% Similarity=0.412 Sum_probs=119.0
Q ss_pred ccccccccccccCCceeEEEEE-ecCCcEEEEEEecccCccchHhHHHHHHHHhcCCC-CccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH-RNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H-~nIv~l~g~~~~~~~~~lV~E 571 (760)
.++|.++++||.|+||.+|.|. ..+|..||||.=+. .....++..|.++...|+| ..|..+.-+..+.+.-.+|||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~--~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS--KAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecc--cCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 4679999999999999999998 67899999997542 2334567889999998875 567777788888888999999
Q ss_pred ccCCCChhhh------------------------------------------------------hccccceeEecCCCcc
Q 004345 572 YMPNKSLDSF------------------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 572 y~~~gsL~~~------------------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
.+ +-||+++ |+|||||+.+......
T Consensus 92 LL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~ 170 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR 170 (341)
T ss_pred cc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccccc
Confidence 88 5677665 2499999977543222
Q ss_pred -----cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCc
Q 004345 598 -----AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYH 647 (760)
Q Consensus 598 -----~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~ 647 (760)
.......||.+|.+--...+..-+.+-|+=|+|-+|....-|..||....
T Consensus 171 ~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 171 QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 23345689999988666555666788999999999999999999997543
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.95 E-value=2e-10 Score=124.07 Aligned_cols=74 Identities=26% Similarity=0.507 Sum_probs=59.1
Q ss_pred HHHhccccccccccccCCceeEEEEEecCC-cEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeC
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGKLQDG-QEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER 563 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~ 563 (760)
+.+-.++|+....+|.|+||+|+.+....+ ...|||+|.-. ......+.++|+..++++.|++|+++...+...
T Consensus 44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~ 119 (516)
T KOG1033|consen 44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYER 119 (516)
T ss_pred hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecC
Confidence 444567889999999999999999986644 48899988643 344556788999999999999999988777543
|
|
| >cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.1e-09 Score=93.15 Aligned_cols=72 Identities=43% Similarity=0.928 Sum_probs=58.7
Q ss_pred CCCEEEeeccCCCCcccc-cccchhhhHhhccCCCCeeeeeeec-CceeEEEecccccccccCCCCcceeEEee
Q 004345 339 QDGFFKLETMKVPYFAER-SSANEDKCKDQCSNNCSCKAYAYEI-GVGCMIWTHNLIDIRKLPSGGTNLYIRVA 410 (760)
Q Consensus 339 ~~~f~~~~~~~~p~~~~~-~~~~~~~C~~~Cl~~CsC~a~~y~~-~~gC~~~~~~l~~~~~~~~~~~~~yirv~ 410 (760)
.++|..+.++++|++... ...++++|++.|++||+|.||+|.+ +.+|.+|..++.+.+.....+..+|||++
T Consensus 11 ~~~f~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~yiKv~ 84 (84)
T cd01098 11 TDGFLKLPDVKLPDNASAITAISLEECREACLSNCSCTAYAYNNGSGGCLLWNGLLNNLRSLSSGGGTLYLRLA 84 (84)
T ss_pred CCEEEEeCCeeCCCchhhhccCCHHHHHHHHhcCCCcceeeecCCCCeEEEEeceecceEeecCCCcEEEEEeC
Confidence 368999999999985322 4568999999999999999999986 45599999999987765545678999974
|
PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.9e-10 Score=126.58 Aligned_cols=136 Identities=29% Similarity=0.394 Sum_probs=108.8
Q ss_pred ccccCCceeEEEEE----ecCCcEEEEEEecccCcc--chHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEEEEeccC
Q 004345 502 KLGQGGFGPVYKGK----LQDGQEIAVKRLSKASGQ--GQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 502 ~lG~G~~g~Vy~~~----~~~~~~vavK~l~~~~~~--~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
++|+|.||.|++.. .+.+...|.|.+++.... .......|..++..++ ||.+|++.-.+..+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 47999999999865 345677888888765321 1225667888899897 9999999999999999999999999
Q ss_pred CCChhhhh--------------------------------------------------ccccceeEecCCCcccccceee
Q 004345 575 NKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKRLV 604 (760)
Q Consensus 575 ~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 604 (760)
+|.|...+ .|||+++..-.. ...+
T Consensus 81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~------~~~c 154 (612)
T KOG0603|consen 81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE------KIAC 154 (612)
T ss_pred cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhh------hhcc
Confidence 99887642 288888764221 1228
Q ss_pred eeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 004345 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSF 645 (760)
Q Consensus 605 gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~ 645 (760)
||..|||||++. .+...+|.||||++++||+||..||..
T Consensus 155 gt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 155 GTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred cchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 999999999997 678899999999999999999999863
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.5e-09 Score=125.42 Aligned_cols=202 Identities=19% Similarity=0.226 Sum_probs=126.6
Q ss_pred ccccccccccCCceeEEEEEecCCcEEEEEEecccC-ccchHhHHHHHHH--HhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS-GQGQEEFMNEVMV--ISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~-~~~~~~f~~E~~~--l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.+...+.||++.|=+|.+|+.+.|. |+||++-+.. .-..+.|.++++- ...++|||.+.+.-.-..+.-.|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 4666799999999999999998877 9999986554 3445555554443 4456899999988776666666777777
Q ss_pred cCCCChhhh--------------------------------------------------hccccceeEecCCCcc-cccc
Q 004345 573 MPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQ-AATK 601 (760)
Q Consensus 573 ~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~-~~~~ 601 (760)
..+ +|++. |+||.--|...-.++. ....
T Consensus 103 vkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~ 181 (1431)
T KOG1240|consen 103 VKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFT 181 (1431)
T ss_pred Hhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccce
Confidence 754 44433 2377655432211111 1111
Q ss_pred eee----eeccccCccccccC----------C-CCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCC
Q 004345 602 RLV----GTYGYMSPEYAMEG----------R-FSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDN 665 (760)
Q Consensus 602 ~~~----gt~~y~aPE~~~~~----------~-~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (760)
..- .-..|+|||-+... . .+++-||||.||++.||++ |+++|... .+..+ +.....
T Consensus 182 fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS------QL~aY--r~~~~~ 253 (1431)
T KOG1240|consen 182 FFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS------QLLAY--RSGNAD 253 (1431)
T ss_pred EEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH------HHHhH--hccCcc
Confidence 111 12379999987541 2 6788999999999999998 67776421 11111 111000
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 666 NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 666 ~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
.. +. .++. .+ -..+.++++.+++.||.+|.++++.++--.+.
T Consensus 254 ~~-e~---~Le~-Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 254 DP-EQ---LLEK-IE---DVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred CH-HH---HHHh-Cc---CccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 00 10 1111 11 12456788899999999999999999875443
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.7e-08 Score=113.35 Aligned_cols=144 Identities=22% Similarity=0.361 Sum_probs=90.5
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeC--------C
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--------E 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--------~ 564 (760)
.++|..++.|..|+||.||..+++ ..+.+|.| +++..- +++- ++.....|.+| |=|... .
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-----ilRn--ilt~a~npfvv---gDc~tllk~~g~lPv 150 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-----ILRN--ILTFAGNPFVV---GDCATLLKNIGPLPV 150 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-----hhhc--cccccCCccee---chhhhhcccCCCCcc
Confidence 467888999999999999999865 46778884 433211 1110 22222344433 222110 0
Q ss_pred eeEEEEeccCCCCh----------------hhhhccccceeEecCCC-------------cccccceeeeeccccCcccc
Q 004345 565 ENMLIYEYMPNKSL----------------DSFLFDFGLARIFGGNQ-------------DQAATKRLVGTYGYMSPEYA 615 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL----------------~~~L~DFGla~~~~~~~-------------~~~~~~~~~gt~~y~aPE~~ 615 (760)
...+-.||..+-.. ...|.|||+.+...... .+...+.++||+.|+|||++
T Consensus 151 dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVi 230 (1205)
T KOG0606|consen 151 DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVI 230 (1205)
T ss_pred hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhh
Confidence 01233344332111 11257999987532110 11123456899999999999
Q ss_pred ccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Q 004345 616 MEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHE 648 (760)
Q Consensus 616 ~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~ 648 (760)
....|...+|.|++|+++||.+-|+.||.....
T Consensus 231 lrqgygkpvdwwamGiIlyeFLVgcvpffGdtp 263 (1205)
T KOG0606|consen 231 LRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP 263 (1205)
T ss_pred hhhccCCCccHHHHHHHHHHHheeeeeccCCCH
Confidence 999999999999999999999999999975433
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.4e-07 Score=111.51 Aligned_cols=147 Identities=20% Similarity=0.298 Sum_probs=112.7
Q ss_pred HhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCC---CCccceeeeEEEeCCeeEE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ---HRNLVRLLGCCVEREENML 568 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~---H~nIv~l~g~~~~~~~~~l 568 (760)
.-...|.+.+.||+|+||.||+|...+++.||+|+=+....- +|.--.+++.+|+ -+-|..+..+..-.+..+|
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 345678999999999999999999888999999986544321 2222333444444 2345555556666788899
Q ss_pred EEeccCCCChhhhh---------------------------------------------------------ccccceeEe
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------------~DFGla~~~ 591 (760)
|+||.+-|+|.+++ +|||-+-.+
T Consensus 772 v~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred eeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 99999999998862 399988765
Q ss_pred cCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCC
Q 004345 592 GGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK 641 (760)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~ 641 (760)
..-.+........+|-.+-.+|...++.++..+|-|.+..+++-|+.|+.
T Consensus 852 ~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 852 KLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 43344445566788889999999999999999999999999999999974
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=98.46 E-value=8e-07 Score=92.38 Aligned_cols=179 Identities=17% Similarity=0.159 Sum_probs=102.9
Q ss_pred cccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCC----------CccceeeeEEE-
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQH----------RNLVRLLGCCV- 561 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H----------~nIv~l~g~~~- 561 (760)
+...+.||.|+++.||.++.. +++.+|||+..-. .....+++.+|.-.+..+.+ -.++.-++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 445688999999999999975 5899999987532 23445677777766655433 12222222221
Q ss_pred --------eCC--------eeEEEEeccCCCChhhhh-------------------------------------------
Q 004345 562 --------ERE--------ENMLIYEYMPNKSLDSFL------------------------------------------- 582 (760)
Q Consensus 562 --------~~~--------~~~lV~Ey~~~gsL~~~L------------------------------------------- 582 (760)
... ..+++|+-+ .++|..++
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 111 235667666 45665542
Q ss_pred --------------ccccceeEecCCCcccccceeeeeccccCcccccc--------CCCCccchhHHHHHHHHHHHhCC
Q 004345 583 --------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME--------GRFSEKSDVFSFGVLLLEIVSGR 640 (760)
Q Consensus 583 --------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~ksDVwSfGv~l~ElltG~ 640 (760)
.||+.....+... .. ...+..|.+||.... -.++.+.|.|++|+++|.|.+|+
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~--~~---~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~ 247 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRY--RC---SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGR 247 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEE--EG---GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS
T ss_pred eeeEEEcCCCCEEEcChHHHeecCcee--ec---cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHcc
Confidence 2565554432111 10 233578999998743 24789999999999999999999
Q ss_pred CCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCC
Q 004345 641 KNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDR 702 (760)
Q Consensus 641 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~R 702 (760)
.|+........... .+ ..+. ...+.+..++...|+.||++|
T Consensus 248 lPf~~~~~~~~~~~-------------------~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 248 LPFGLSSPEADPEW-------------------DF-SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp -STCCCGGGSTSGG-------------------GG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCCccccccc-------------------cc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99975433211100 11 1222 344566678888999999988
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.2e-07 Score=87.77 Aligned_cols=141 Identities=18% Similarity=0.104 Sum_probs=99.7
Q ss_pred cccccccCCceeEEEEEecCCcEEEEEEecccCcc----chHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEEEEecc
Q 004345 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQ----GQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 499 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~----~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
+...|++|+||+||.+.- .+..++.+.+.....- ....|.+|+++|++|+ |+++++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 457899999999997765 5778887777644221 1225889999999995 5889999886 4569999999
Q ss_pred CCCChhhh--------------------------------------------hccccceeEecCCCcc----c-------
Q 004345 574 PNKSLDSF--------------------------------------------LFDFGLARIFGGNQDQ----A------- 598 (760)
Q Consensus 574 ~~gsL~~~--------------------------------------------L~DFGla~~~~~~~~~----~------- 598 (760)
.+.+|... |+|||+|......... .
T Consensus 81 ~G~~L~~~~~~~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~l 160 (218)
T PRK12274 81 AGAAMYQRPPRGDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHL 160 (218)
T ss_pred cCccHHhhhhhhhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHH
Confidence 99888643 2499999865432210 0
Q ss_pred ccceeeeeccccCccccccC-CCC-ccchhHHHHHHHHHHHhCCCCCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEG-RFS-EKSDVFSFGVLLLEIVSGRKNTS 644 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~-~~s-~ksDVwSfGv~l~ElltG~~p~~ 644 (760)
.......++.|++|+...-. ..+ ...+.++-|.-+|.++|++.+.-
T Consensus 161 lk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 161 LKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 01112356778888765422 334 56788899999999999998753
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=8.3e-07 Score=88.98 Aligned_cols=84 Identities=18% Similarity=0.271 Sum_probs=65.9
Q ss_pred cccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcC-----CCCccceeeeEEEeCC---e-eEEE
Q 004345 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-----QHRNLVRLLGCCVERE---E-NMLI 569 (760)
Q Consensus 499 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-----~H~nIv~l~g~~~~~~---~-~~lV 569 (760)
-.+.||+|+||.||. .+.....+||++........+.+.+|+.+++++ +||||++++|++.++. . ..+|
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 347899999999996 333233469988765445567899999999999 5799999999998874 3 3378
Q ss_pred Eec--cCCCChhhhhcc
Q 004345 570 YEY--MPNKSLDSFLFD 584 (760)
Q Consensus 570 ~Ey--~~~gsL~~~L~D 584 (760)
+|| +++|+|.++|.+
T Consensus 84 ~e~~G~~~~tL~~~l~~ 100 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQ 100 (210)
T ss_pred ecCCCCcchhHHHHHHc
Confidence 999 568999999864
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.37 E-value=8.3e-08 Score=110.80 Aligned_cols=205 Identities=19% Similarity=0.236 Sum_probs=141.7
Q ss_pred ccccccccccccCCceeEEEEEec--CCcEEEEEEecccC--ccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ--DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENML 568 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~l 568 (760)
...|.+.+.||+|+|+.|-..... ....+|+|.+.... ....+....|..+-+.+. |+|++++++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 345777788999999999888753 34567777766443 223334455777777776 9999999999999999999
Q ss_pred EEeccCCCChhhhh------------------------------------------------------ccccceeEecC-
Q 004345 569 IYEYMPNKSLDSFL------------------------------------------------------FDFGLARIFGG- 593 (760)
Q Consensus 569 V~Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~- 593 (760)
++||..++++...+ .|||+|..+..
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 99999888887654 28898887765
Q ss_pred CCcccccceeee-eccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccc
Q 004345 594 NQDQAATKRLVG-TYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 594 ~~~~~~~~~~~g-t~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (760)
+.........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+......... ...| .+....
T Consensus 179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-~~~~-----~~~~~~--- 249 (601)
T KOG0590|consen 179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-YSSW-----KSNKGR--- 249 (601)
T ss_pred CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc-ceee-----cccccc---
Confidence 333444455678 9999999999874 4567899999999999999999998754433211 1111 111100
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
........-.....++..+++..+|+.|.+.+++..
T Consensus 250 ---~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 250 ---FTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ---cccCccccCChhhhhcccccccCCchhccccccccc
Confidence 000001111233455666778789999999888755
|
|
| >smart00108 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.6e-06 Score=75.23 Aligned_cols=87 Identities=23% Similarity=0.345 Sum_probs=61.1
Q ss_pred EEecCccEEEEcCC-CCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCcccccccCCcc
Q 004345 94 TISEDGNLVVLNGK-KQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKK 172 (760)
Q Consensus 94 ~l~~~G~L~l~d~~-~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~~~g~~ 172 (760)
....||+||+.+.. +.++|++|+..... ....+.|.++|||||++. ++.++|+| +|-
T Consensus 25 ~~q~dgnlV~~~~~~~~~vW~snt~~~~~-~~~~l~l~~dGnLvl~~~-~g~~vW~S-----~t~--------------- 82 (114)
T smart00108 25 IMQNDYNLILYKSSSRTVVWVANRDNPVS-DSCTLTLQSDGNLVLYDG-DGRVVWSS-----NTT--------------- 82 (114)
T ss_pred CCCCCEEEEEEECCCCcEEEECCCCCCCC-CCEEEEEeCCCCEEEEeC-CCCEEEEe-----ccc---------------
Confidence 34578999999865 57999999865431 236789999999999987 46789997 220
Q ss_pred EEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecC
Q 004345 173 VQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSG 215 (760)
Q Consensus 173 ~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g 215 (760)
...|.+.+.|+.+|...++- ....+.|.+.
T Consensus 83 -----------~~~~~~~~~L~ddGnlvl~~--~~~~~~W~Sf 112 (114)
T smart00108 83 -----------GANGNYVLVLLDDGNLVIYD--SDGNFLWQSF 112 (114)
T ss_pred -----------CCCCceEEEEeCCCCEEEEC--CCCCEEeCCC
Confidence 12356778888888765542 2335678764
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.5e-06 Score=86.08 Aligned_cols=79 Identities=15% Similarity=0.225 Sum_probs=56.8
Q ss_pred ccccccCCceeEEEEEecCCcEEEEEEecccCc--cc-------hHhH-----------------HHHHHHHhcCCCCcc
Q 004345 500 ANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASG--QG-------QEEF-----------------MNEVMVISNLQHRNL 553 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~--~~-------~~~f-----------------~~E~~~l~~l~H~nI 553 (760)
...||+|+||.||+|..++|+.||||+++.... .. ...| .+|++++.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 478999999999999988899999999975321 11 1122 349999999988877
Q ss_pred ceeeeEEEeCCeeEEEEeccCCCChhh
Q 004345 554 VRLLGCCVEREENMLIYEYMPNKSLDS 580 (760)
Q Consensus 554 v~l~g~~~~~~~~~lV~Ey~~~gsL~~ 580 (760)
.....+.. ...+|||||++++++..
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~ 106 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAA 106 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcc
Confidence 44333322 23489999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd00028 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Probab=98.23 E-value=5.8e-06 Score=74.79 Aligned_cols=87 Identities=25% Similarity=0.367 Sum_probs=61.1
Q ss_pred Eec-CccEEEEcCC-CCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCcccccccCCcc
Q 004345 95 ISE-DGNLVVLNGK-KQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKK 172 (760)
Q Consensus 95 l~~-~G~L~l~d~~-~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~~~g~~ 172 (760)
... ||+||+.+.. +.++|++|+... ......+.|.++|||||.|. ++.++|+|= |
T Consensus 26 ~q~~dgnlv~~~~~~~~~vW~snt~~~-~~~~~~l~l~~dGnLvl~~~-~g~~vW~S~-----~---------------- 82 (116)
T cd00028 26 MQSRDYNLILYKGSSRTVVWVANRDNP-SGSSCTLTLQSDGNLVIYDG-SGTVVWSSN-----T---------------- 82 (116)
T ss_pred CCCCeEEEEEEeCCCCeEEEECCCCCC-CCCCEEEEEecCCCeEEEcC-CCcEEEEec-----c----------------
Confidence 344 8999999765 579999998653 22456799999999999987 467899962 1
Q ss_pred EEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCC
Q 004345 173 VQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGP 216 (760)
Q Consensus 173 ~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~ 216 (760)
+ .+.+.+.+.|+.+|...++- ....+.|.+..
T Consensus 83 ----~------~~~~~~~~~L~ddGnlvl~~--~~~~~~W~Sf~ 114 (116)
T cd00028 83 ----T------RVNGNYVLVLLDDGNLVLYD--SDGNFLWQSFD 114 (116)
T ss_pred ----c------CCCCceEEEEeCCCCEEEEC--CCCCEEEcCCC
Confidence 0 02356788888888765542 23456787654
|
The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.6e-06 Score=83.18 Aligned_cols=90 Identities=18% Similarity=0.211 Sum_probs=65.6
Q ss_pred HHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCc----------------------cchHhHHHHHHHH
Q 004345 488 EELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASG----------------------QGQEEFMNEVMVI 545 (760)
Q Consensus 488 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~----------------------~~~~~f~~E~~~l 545 (760)
.++......|.+.+.||+|+||.||++..++++.||||++..... .....+.+|..++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 344444445788899999999999999988899999998753210 0112367889999
Q ss_pred hcCCCC--ccceeeeEEEeCCeeEEEEeccCCCChhhh
Q 004345 546 SNLQHR--NLVRLLGCCVEREENMLIYEYMPNKSLDSF 581 (760)
Q Consensus 546 ~~l~H~--nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~ 581 (760)
.++.|+ .+.+.++. ...++||||+++++|...
T Consensus 88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~ 121 (198)
T cd05144 88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRV 121 (198)
T ss_pred HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhc
Confidence 999887 44555442 455899999999987654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=4.6e-06 Score=83.98 Aligned_cols=82 Identities=16% Similarity=0.243 Sum_probs=67.4
Q ss_pred cccccCCceeEEEEEecCCcEEEEEEecccCcc--------chHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 501 NKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQ--------GQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~--------~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
+.||+|++|.||+|.. .+..|+||+....... ....+.+|+.++..++|++|.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 6799999999999987 5778999976532211 124688999999999999998888888888889999999
Q ss_pred cCCCChhhhhc
Q 004345 573 MPNKSLDSFLF 583 (760)
Q Consensus 573 ~~~gsL~~~L~ 583 (760)
+++++|.+++.
T Consensus 81 ~~G~~L~~~~~ 91 (211)
T PRK14879 81 IEGEPLKDLIN 91 (211)
T ss_pred eCCcCHHHHHH
Confidence 99999987764
|
|
| >PF11883 DUF3403: Domain of unknown function (DUF3403); InterPro: IPR021820 This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins | Back alignment and domain information |
|---|
Probab=98.14 E-value=2.7e-06 Score=62.60 Aligned_cols=43 Identities=44% Similarity=0.743 Sum_probs=36.8
Q ss_pred cCCCCCCCCceeecccCCCCCCCCCCCC--ccccccceEeeeeccC
Q 004345 717 KDLPAAKQPAFTVRRGAYDSASSSNQNQ--QICSINDVTVTLMEGR 760 (760)
Q Consensus 717 ~~~~~p~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~r 760 (760)
..+|.|++|+|+..|...+.++++ ... +.+|+|+||+|+||||
T Consensus 4 ~~LP~PKqPgF~~~r~~~e~~sSs-s~~~~~~~SvNevTiT~l~~R 48 (48)
T PF11883_consen 4 ATLPQPKQPGFFTGRSPSETDSSS-SKQRDESCSVNEVTITMLEAR 48 (48)
T ss_pred ccCCCCCCCCEEeEcCCCCcCCCc-ccccCCCCCeeeEEEEeEecC
Confidence 378999999999999887776665 334 7899999999999998
|
; GO: 0004674 protein serine/threonine kinase activity |
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.11 E-value=5.5e-06 Score=86.72 Aligned_cols=96 Identities=20% Similarity=0.169 Sum_probs=60.5
Q ss_pred eeeeccccCccccccCC------CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 603 LVGTYGYMSPEYAMEGR------FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~------~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.-|.-.-||||+....+ --.|+|.|+.|.+.||+++...||....+ ...+... .++..+ |.+.
T Consensus 411 ~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe-m~L~~r~-----Yqe~qL-----Palp 479 (598)
T KOG4158|consen 411 LGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE-MLLDTRT-----YQESQL-----PALP 479 (598)
T ss_pred CCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch-heechhh-----hhhhhC-----CCCc
Confidence 34667889999975432 23699999999999999999999864211 1111111 111111 2222
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
+.. ...+.+++...++.||.+||+..-....|+
T Consensus 480 ~~v----pp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 480 SRV----PPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred ccC----ChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 222 234567777889999999998776555553
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=98.07 E-value=9.1e-06 Score=80.51 Aligned_cols=77 Identities=18% Similarity=0.218 Sum_probs=57.8
Q ss_pred ccccccCCceeEEEEEecCCcEEEEEEecccCcc--c------------------------hHhHHHHHHHHhcCCCCcc
Q 004345 500 ANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQ--G------------------------QEEFMNEVMVISNLQHRNL 553 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~--~------------------------~~~f~~E~~~l~~l~H~nI 553 (760)
...||+|++|.||+|...+|+.||||+++..... . ...+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999878999999998754211 0 1124578999999999988
Q ss_pred ceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 554 VRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 554 v~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
.....+... ..+|||||++++++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~ 104 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGS 104 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCc
Confidence 554444333 34899999998754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=98.04 E-value=1e-05 Score=80.58 Aligned_cols=82 Identities=18% Similarity=0.287 Sum_probs=64.1
Q ss_pred ccccCCceeEEEEEecCCcEEEEEEecccCcc--------chHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 502 KLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQ--------GQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 502 ~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~--------~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.||+|+||.||+|.. ++..|++|........ ..+++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 5788999986532111 1256788999999999887766666666777789999999
Q ss_pred CCCChhhhhcc
Q 004345 574 PNKSLDSFLFD 584 (760)
Q Consensus 574 ~~gsL~~~L~D 584 (760)
++++|.+++.+
T Consensus 80 ~g~~l~~~~~~ 90 (199)
T TIGR03724 80 EGKPLKDVIEE 90 (199)
T ss_pred CCccHHHHHhh
Confidence 99999877643
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.5e-05 Score=92.16 Aligned_cols=88 Identities=19% Similarity=0.258 Sum_probs=67.7
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEE-ecccCc-------cchHhHHHHHHHHhcCCCCccceeeeEEEeCCe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKR-LSKASG-------QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~-l~~~~~-------~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~ 565 (760)
...|...+.||+|+||.||+|.+.... +++|+ +.+... ...+++.+|++++.+++|++++....++.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 344566789999999999999876443 33343 222111 123568899999999999999998888888888
Q ss_pred eEEEEeccCCCChhhhh
Q 004345 566 NMLIYEYMPNKSLDSFL 582 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L 582 (760)
.++||||+++++|.+++
T Consensus 411 ~~lv~E~~~g~~L~~~l 427 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVL 427 (535)
T ss_pred CEEEEEecCCCcHHHHH
Confidence 89999999999999876
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.2e-05 Score=89.31 Aligned_cols=197 Identities=21% Similarity=0.274 Sum_probs=130.2
Q ss_pred cccccccccc--CCceeEEEEEe---cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeE
Q 004345 496 NFQLANKLGQ--GGFGPVYKGKL---QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENM 567 (760)
Q Consensus 496 ~~~~~~~lG~--G~~g~Vy~~~~---~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~ 567 (760)
.|.+.+.+|. |.+|.||.+.. .++..+|+|+-+.. .......=++|+....+++ |+|.++....+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3556688999 99999999986 35778999985432 2233344567777777774 999999999999999999
Q ss_pred EEEeccCCCChhhh--------------------------------------------------------hccccceeEe
Q 004345 568 LIYEYMPNKSLDSF--------------------------------------------------------LFDFGLARIF 591 (760)
Q Consensus 568 lV~Ey~~~gsL~~~--------------------------------------------------------L~DFGla~~~ 591 (760)
+-+|++. .+|..+ +.|||+...+
T Consensus 195 iqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i 273 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKI 273 (524)
T ss_pred eeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEc
Confidence 9999885 555444 1389998877
Q ss_pred cCCCcc---cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcc
Q 004345 592 GGNQDQ---AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVI 668 (760)
Q Consensus 592 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (760)
....-. .......|...|++||.. ++.++.++|||++|.+..|..++.......... .|...+...
T Consensus 274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~--------~W~~~r~~~-- 342 (524)
T KOG0601|consen 274 SDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNS--------SWSQLRQGY-- 342 (524)
T ss_pred cCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCC--------Ccccccccc--
Confidence 644311 111233567789999976 567889999999999999999987654321000 111111111
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 669 DLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 669 ~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+-+..... -..++......+++.+|..|++...+..
T Consensus 343 -ip~e~~~~-----~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 343 -IPLEFCEG-----GSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -CchhhhcC-----cchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11111100 1112222666788899999998877665
|
|
| >smart00473 PAN_AP divergent subfamily of APPLE domains | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.9e-05 Score=63.66 Aligned_cols=69 Identities=41% Similarity=0.913 Sum_probs=51.3
Q ss_pred CCEEEeeccCCCCccc--ccccchhhhHhhccC-CCCeeeeeeec-CceeEEEe-cccccccccCCCCcceeEE
Q 004345 340 DGFFKLETMKVPYFAE--RSSANEDKCKDQCSN-NCSCKAYAYEI-GVGCMIWT-HNLIDIRKLPSGGTNLYIR 408 (760)
Q Consensus 340 ~~f~~~~~~~~p~~~~--~~~~~~~~C~~~Cl~-~CsC~a~~y~~-~~gC~~~~-~~l~~~~~~~~~~~~~yir 408 (760)
..|..+.++.++++.. ....++++|++.|++ +|+|.|+.|.. +.+|.+|. ..+.+....+..+.+.|.+
T Consensus 4 ~~f~~~~~~~l~~~~~~~~~~~s~~~C~~~C~~~~~~C~s~~y~~~~~~C~l~~~~~~~~~~~~~~~~~~~y~~ 77 (78)
T smart00473 4 DCFVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNNGTKGCLLWSESSLGDARLFPSGGVDLYEK 77 (78)
T ss_pred ceeEEecCccCCCCcceeEcCCCHHHHHHHhCCCCCceEEEEEcCCCCEEEEeeCCccccceecccCCceeEEe
Confidence 4688888888876332 123489999999999 99999999986 55699999 7777766444555555544
|
Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=97.73 E-value=5.3e-05 Score=77.75 Aligned_cols=82 Identities=17% Similarity=0.162 Sum_probs=60.6
Q ss_pred ccccccccccCCceeEEEEE--ecCCcEEEEEEecccCcc------------------------chHhHHHHHHHHhcCC
Q 004345 496 NFQLANKLGQGGFGPVYKGK--LQDGQEIAVKRLSKASGQ------------------------GQEEFMNEVMVISNLQ 549 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~--~~~~~~vavK~l~~~~~~------------------------~~~~f~~E~~~l~~l~ 549 (760)
.|++.+.||+|++|.||+|. ..+++.||||+++..... ....+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47888999999999999998 568999999998743210 0123568999999997
Q ss_pred CC--ccceeeeEEEeCCeeEEEEeccCCCChhhh
Q 004345 550 HR--NLVRLLGCCVEREENMLIYEYMPNKSLDSF 581 (760)
Q Consensus 550 H~--nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~ 581 (760)
|. .+.++++. ...+|||||+++++|...
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~ 138 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAP 138 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccc
Confidence 53 34445443 235899999999887654
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=97.69 E-value=7.3e-05 Score=69.98 Aligned_cols=79 Identities=18% Similarity=0.190 Sum_probs=66.5
Q ss_pred cccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCC--CccceeeeEEEeCCeeEEEEeccCCC
Q 004345 499 LANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH--RNLVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 499 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H--~nIv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
+.+.||+|.++.||++.... ..+++|....... ...+.+|+.++..++| .++++++++....+..++++||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35789999999999999764 7899998865433 5679999999999976 59999999988888899999999988
Q ss_pred Chhh
Q 004345 577 SLDS 580 (760)
Q Consensus 577 sL~~ 580 (760)
.+..
T Consensus 79 ~~~~ 82 (155)
T cd05120 79 TLDE 82 (155)
T ss_pred eccc
Confidence 7753
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00065 Score=61.05 Aligned_cols=99 Identities=26% Similarity=0.449 Sum_probs=65.4
Q ss_pred CeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEc-cCCCCCCCCCcEEEEecCccEEEEcCCCCEEEecC
Q 004345 37 ESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVA-NRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSN 115 (760)
Q Consensus 37 ~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~A-Nr~~pv~~~~~~l~l~~~G~L~l~d~~~~~vWst~ 115 (760)
+.+.+.+|.+.|-|-..| + |-| |. ...++||.. +...... ..+.+.|..||||||.|..+.++|+|.
T Consensus 12 ~p~~~~s~~~~L~l~~dG-n-----Lvl-~~----~~~~~iWss~~t~~~~~-~~~~~~L~~~GNlvl~d~~~~~lW~Sf 79 (114)
T PF01453_consen 12 SPLTSSSGNYTLILQSDG-N-----LVL-YD----SNGSVIWSSNNTSGRGN-SGCYLVLQDDGNLVLYDSSGNVLWQSF 79 (114)
T ss_dssp EEEEECETTEEEEEETTS-E-----EEE-EE----TTTEEEEE--S-TTSS--SSEEEEEETTSEEEEEETTSEEEEEST
T ss_pred cccccccccccceECCCC-e-----EEE-Ec----CCCCEEEEecccCCccc-cCeEEEEeCCCCEEEEeecceEEEeec
Confidence 345565588999887665 3 433 33 235679999 4444422 467899999999999999999999984
Q ss_pred CCCCcCCCCceEEEec--CCCEEEEeCCCCceeeeecCCC
Q 004345 116 VSSLANNSNTRAQLLD--SGNLVLHDNISQVSIWDSFQEP 153 (760)
Q Consensus 116 ~~~~~~~~~~~a~Lld--sGNlVl~~~~~~~~lWQSFd~P 153 (760)
.. . ..+.+..++ .||++ ... ...+.|.|=+.|
T Consensus 80 ~~-p---tdt~L~~q~l~~~~~~-~~~-~~~~sw~s~~dp 113 (114)
T PF01453_consen 80 DY-P---TDTLLPGQKLGDGNVT-GKN-DSLTSWSSNTDP 113 (114)
T ss_dssp TS-S---S-EEEEEET--TSEEE-EES-TSSEEEESS---
T ss_pred CC-C---ccEEEeccCcccCCCc-ccc-ceEEeECCCCCC
Confidence 32 2 246677777 88888 654 346789886665
|
Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B .... |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.59 E-value=2e-05 Score=80.92 Aligned_cols=148 Identities=22% Similarity=0.288 Sum_probs=89.6
Q ss_pred HHhcCCCCccceeeeEEEeC-----CeeEEEEeccCCCChhhhhc-----------------------------------
Q 004345 544 VISNLQHRNLVRLLGCCVER-----EENMLIYEYMPNKSLDSFLF----------------------------------- 583 (760)
Q Consensus 544 ~l~~l~H~nIv~l~g~~~~~-----~~~~lV~Ey~~~gsL~~~L~----------------------------------- 583 (760)
-|-.+.|.|||+++.|+.+. .+..++.|||..|+|..+|-
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi 199 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence 34456799999999998653 35689999999999988851
Q ss_pred -------------cccceeEecCCCcc----------cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCC
Q 004345 584 -------------DFGLARIFGGNQDQ----------AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640 (760)
Q Consensus 584 -------------DFGla~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~ 640 (760)
-=||.++-....+. .......+-++|-|||+-.....+.++|||+||+..+||..+.
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 12333321111000 0111123567899999887777888999999999999998876
Q ss_pred CCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 641 KNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 641 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.-......... .+......+- .+.. .+-...+.+|++..|..||+|.+++.
T Consensus 280 iq~tnseS~~~-----------~ee~ia~~i~-~len-------~lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 280 IQSTNSESKVE-----------VEENIANVII-GLEN-------GLQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred eccCCCcceee-----------hhhhhhhhee-eccC-------ccccCcCcccccCCCCCCcchhhhhc
Confidence 53211111000 0000000000 0000 00113456899999999999998765
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00011 Score=82.42 Aligned_cols=81 Identities=22% Similarity=0.295 Sum_probs=55.3
Q ss_pred cccccCCceeEEEEEecCCcEEEEEEecccCccc----------------------------------------hHhHHH
Q 004345 501 NKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG----------------------------------------QEEFMN 540 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~----------------------------------------~~~f~~ 540 (760)
+.||+|++|.||+|++++|+.||||+.++..... +-+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 6799999999999999999999999986431100 013556
Q ss_pred HHHHHhcC----CCCccceeeeEEE-eCCeeEEEEeccCCCChhhh
Q 004345 541 EVMVISNL----QHRNLVRLLGCCV-EREENMLIYEYMPNKSLDSF 581 (760)
Q Consensus 541 E~~~l~~l----~H~nIv~l~g~~~-~~~~~~lV~Ey~~~gsL~~~ 581 (760)
|+..+.++ +|.+-+.+-.++. .....+|||||++|++|.++
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~ 248 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDI 248 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccH
Confidence 66666555 2333334333332 23457999999999988765
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00065 Score=66.79 Aligned_cols=75 Identities=17% Similarity=0.320 Sum_probs=50.5
Q ss_pred ccccccCCceeEEEEEecCCcEEEEEEecccCcc--chHhH----------------------HHHHHHHhcCCCC--cc
Q 004345 500 ANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQ--GQEEF----------------------MNEVMVISNLQHR--NL 553 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~--~~~~f----------------------~~E~~~l~~l~H~--nI 553 (760)
.+.||+|+||.||+|...+++.||||++...... ....+ ..|...+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999888999999988643211 11111 3455566665443 24
Q ss_pred ceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 554 VRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 554 v~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
.+.+++ ...++||||++++.+
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~ 102 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGI 102 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCc
Confidence 444443 346899999999654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.00018 Score=84.46 Aligned_cols=154 Identities=21% Similarity=0.276 Sum_probs=101.8
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
..+.+.+.+-+-+|.++.++.+.-. .+...++|..... .....+....+-.++-..+||-+++..--+......+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 3466778888889999999877632 2333344433221 12223334444444444556777766555556677899
Q ss_pred EEeccCCCChhhhh--------------------------------------------------ccccceeEecC-----
Q 004345 569 IYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGG----- 593 (760)
Q Consensus 569 V~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~----- 593 (760)
|++|..+++|...| .|||+....+.
T Consensus 882 ~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~ 961 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTT 961 (1205)
T ss_pred hhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcC
Confidence 99999888887663 26663321110
Q ss_pred -C-------------------C----cccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 004345 594 -N-------------------Q----DQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFY 646 (760)
Q Consensus 594 -~-------------------~----~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~ 646 (760)
. + +........||+.|.+||...+......+|.|++|++++|.++|..|+...
T Consensus 962 ~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 962 DLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 0 0 001123457899999999999999999999999999999999999998643
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0019 Score=73.57 Aligned_cols=85 Identities=20% Similarity=0.309 Sum_probs=57.6
Q ss_pred cccccccccccCCceeEEEEEecC-CcEEEEEEecccCcc----------------------------------ch----
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQ----------------------------------GQ---- 535 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~----------------------------------~~---- 535 (760)
..|+. +.||+|++|.||+|++++ |+.||||++++.-.+ ..
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 789999999999999987 999999999743100 00
Q ss_pred --HhHHHHHHHHhcCC----CCccceeeeEEEe-CCeeEEEEeccCCCChhh
Q 004345 536 --EEFMNEVMVISNLQ----HRNLVRLLGCCVE-REENMLIYEYMPNKSLDS 580 (760)
Q Consensus 536 --~~f~~E~~~l~~l~----H~nIv~l~g~~~~-~~~~~lV~Ey~~~gsL~~ 580 (760)
-+|.+|+..+.+++ |.+.+.+-.++.+ ....+|||||++|+.+.+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d 250 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSD 250 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHh
Confidence 12455555555442 4444444444433 356789999999998865
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0034 Score=71.00 Aligned_cols=59 Identities=22% Similarity=0.273 Sum_probs=49.1
Q ss_pred ecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 516 LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 516 ~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
..++.+|.|...+.......+...+-++-|+.++||||++++......+..|||+|-+.
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~ 92 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR 92 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc
Confidence 44688899998876655334557788889999999999999999999999999999874
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0024 Score=71.32 Aligned_cols=199 Identities=16% Similarity=0.115 Sum_probs=123.4
Q ss_pred HHHhccccccccccccCCceeEEEEEe--cCCcEEEEEEecccCccch--HhHHHHHHHHhcC-CCCccceeeeEEEeCC
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGKL--QDGQEIAVKRLSKASGQGQ--EEFMNEVMVISNL-QHRNLVRLLGCCVERE 564 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~l~~~~~~~~--~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~ 564 (760)
....+.+|..+..||.|.|+.|++... .++..+++|.+.+...... ..-+.|+.+...+ .|.++++....+...+
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 445567889999999999999999874 3577889998765432222 2234666666666 5999999988888888
Q ss_pred eeEEEEeccCCCChhhhh---------------------------------------------------ccccceeEecC
Q 004345 565 ENMLIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~ 593 (760)
+.++-.||+.++++...+ .|||....+.-
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~ 419 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF 419 (524)
T ss_pred cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccce
Confidence 889999999999876542 13333321100
Q ss_pred CCcccccceeeeecccc--CccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccc
Q 004345 594 NQDQAATKRLVGTYGYM--SPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~--aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (760)
... ...+.-+++ +++......+..+.|++|||..+.|.+++..-...... +.....+..
T Consensus 420 ----~~~-~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~----------~~~i~~~~~---- 480 (524)
T KOG0601|consen 420 ----SSG-VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ----------SLTIRSGDT---- 480 (524)
T ss_pred ----ecc-cccccccccccchhhccccccccccccccccccccccccCcccCccccc----------ceeeecccc----
Confidence 000 011222333 55556677789999999999999999998764321000 000111111
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
+.+.. .. ..+..++......++..||.+.+...+.+
T Consensus 481 -p~~~~--~~---~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 481 -PNLPG--LK---LQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred -cCCCc--hH---HhhhhhhhhhcCCccccchhhhhhcccch
Confidence 11111 11 23333444456688889998888776543
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.005 Score=62.02 Aligned_cols=81 Identities=15% Similarity=0.240 Sum_probs=63.0
Q ss_pred cccccCCceeEEEEEecCCcEEEEEEecccCc-cchHhHHHHHHHHhcCCC--CccceeeeEEEeCC---eeEEEEeccC
Q 004345 501 NKLGQGGFGPVYKGKLQDGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQH--RNLVRLLGCCVERE---ENMLIYEYMP 574 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H--~nIv~l~g~~~~~~---~~~lV~Ey~~ 574 (760)
+.|+.|..+.||++...+|+.+++|....... .....+.+|+++++.+++ .++.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 67899999999999987778999998764322 245678999999999975 45677888776543 5689999999
Q ss_pred CCChhhh
Q 004345 575 NKSLDSF 581 (760)
Q Consensus 575 ~gsL~~~ 581 (760)
+.++...
T Consensus 84 G~~l~~~ 90 (223)
T cd05154 84 GRVLRDR 90 (223)
T ss_pred CEecCCC
Confidence 8876654
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0097 Score=61.14 Aligned_cols=82 Identities=17% Similarity=0.280 Sum_probs=59.9
Q ss_pred cccc-cCCceeEEEEEecCCcEEEEEEecccC-------------ccchHhHHHHHHHHhcCCCCcc--ceeeeEEEeCC
Q 004345 501 NKLG-QGGFGPVYKGKLQDGQEIAVKRLSKAS-------------GQGQEEFMNEVMVISNLQHRNL--VRLLGCCVERE 564 (760)
Q Consensus 501 ~~lG-~G~~g~Vy~~~~~~~~~vavK~l~~~~-------------~~~~~~f~~E~~~l~~l~H~nI--v~l~g~~~~~~ 564 (760)
..|| .|+.|+||+.... +..++||.+.... ......+.+|+.++.+|+|++| ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5687 7888999998875 6788999875311 1223568899999999998875 77777754432
Q ss_pred e----eEEEEeccCC-CChhhhhc
Q 004345 565 E----NMLIYEYMPN-KSLDSFLF 583 (760)
Q Consensus 565 ~----~~lV~Ey~~~-gsL~~~L~ 583 (760)
. .++|+||+++ .+|.+++.
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~ 139 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQ 139 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHh
Confidence 2 3599999997 68877653
|
|
| >cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.0049 Score=50.50 Aligned_cols=33 Identities=18% Similarity=0.686 Sum_probs=28.0
Q ss_pred cchhhhHhhccCCCCeeeeeeecCce-eEEEecc
Q 004345 359 ANEDKCKDQCSNNCSCKAYAYEIGVG-CMIWTHN 391 (760)
Q Consensus 359 ~~~~~C~~~Cl~~CsC~a~~y~~~~g-C~~~~~~ 391 (760)
.+.++|++.|+.+|+|.||.|..+.+ |+++...
T Consensus 25 ~s~~~Cq~~C~~~~~C~afT~~~~~~~C~lk~~~ 58 (73)
T cd01100 25 SSAEQCQAACTADPGCLAFTYNTKSKKCFLKSSE 58 (73)
T ss_pred CCHHHHHHHcCCCCCceEEEEECCCCeEEcccCC
Confidence 48899999999999999999987555 9887653
|
PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.0015 Score=73.16 Aligned_cols=144 Identities=14% Similarity=0.140 Sum_probs=100.0
Q ss_pred HhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCc-cceeeeEEEeCCeeEEEE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN-LVRLLGCCVEREENMLIY 570 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~n-Iv~l~g~~~~~~~~~lV~ 570 (760)
..+.-+...+.++++++++++|.+-...+....+.+... ....-++++|.+++||| .+..++-+..+...++++
T Consensus 239 Dk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~ 313 (829)
T KOG0576|consen 239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPM 313 (829)
T ss_pred CCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhh
Confidence 334445555778999999999987443444445554322 44556889999999999 777888777788889999
Q ss_pred eccCCC-Chhh-----------hh-----------------------------------ccccceeEecCCCccccccee
Q 004345 571 EYMPNK-SLDS-----------FL-----------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 571 Ey~~~g-sL~~-----------~L-----------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
+++..+ +... +- .||+....+... ...+..
T Consensus 314 ~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d~~l~s~~~~~~~~~~v~~~L~~~---~~~~t~ 390 (829)
T KOG0576|consen 314 RICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRDNILGSEEEVKLLDFAVPPQLTRT---MKPRTA 390 (829)
T ss_pred hhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcccccccccccccccccCCcccCcc---cccccC
Confidence 999877 2211 10 122222222111 123446
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCC
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~ 643 (760)
.+++.|+|||++..+.+..+.|+|+.|+--.++--|-.|.
T Consensus 391 ~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 391 IGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred CCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 7899999999999999999999999998777777777664
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.019 Score=55.20 Aligned_cols=76 Identities=16% Similarity=0.094 Sum_probs=55.4
Q ss_pred ccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccc-eeeeEEEeCCeeEEEEeccCCCCh
Q 004345 500 ANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV-RLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv-~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
.+.|+.|.++.||+++.. ++.+++|....... ....+.+|+.++..+.+.+++ +++.+. ....++||||+++.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 367899999999999875 77899998754321 234567899999988655544 455443 3345899999999876
Q ss_pred h
Q 004345 579 D 579 (760)
Q Consensus 579 ~ 579 (760)
.
T Consensus 79 ~ 79 (170)
T cd05151 79 L 79 (170)
T ss_pred c
Confidence 4
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.018 Score=63.40 Aligned_cols=99 Identities=23% Similarity=0.307 Sum_probs=59.1
Q ss_pred hHhHHHHHHHHhcCCCCccceeeeEEEeCCe-eEEEEeccCCCChhhhhc-----cccce-eEecCCCcccccceeeeec
Q 004345 535 QEEFMNEVMVISNLQHRNLVRLLGCCVEREE-NMLIYEYMPNKSLDSFLF-----DFGLA-RIFGGNQDQAATKRLVGTY 607 (760)
Q Consensus 535 ~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~-~~lV~Ey~~~gsL~~~L~-----DFGla-~~~~~~~~~~~~~~~~gt~ 607 (760)
..+++-....++.+.|+|+...+++...... ..+|+|++ +.||++++- ||.+- ..+. ......-|-
T Consensus 26 s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~l~~~s~~~~~~~------~~~~~~~td 98 (725)
T KOG1093|consen 26 SIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGNLKDESLLAHGVL------HLNIIYITD 98 (725)
T ss_pred HHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcccchhhhcccccc------eehhhhccc
Confidence 3456667788889999999999998765443 57889988 567776642 22111 1000 000000000
Q ss_pred cccCccccccCCCCccchhHHHHHHHHHHHhCCCCC
Q 004345 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643 (760)
Q Consensus 608 ~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~ 643 (760)
..+. - ......+|+||||+|.++.|+.-|..-+
T Consensus 99 ~~~t-~--~~~~~~pKsdVwsl~~i~~el~L~~~l~ 131 (725)
T KOG1093|consen 99 HFLT-K--YPSPIGPKSDVWSLGFIILELYLGISLE 131 (725)
T ss_pred cccc-c--CCCCCCcchhhhhHHHHHHHHHHhhHHH
Confidence 0000 0 0112336999999999999999987654
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.17 Score=56.02 Aligned_cols=73 Identities=25% Similarity=0.345 Sum_probs=55.7
Q ss_pred eeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEe----CCeeEEEEeccCC-CChhhh
Q 004345 509 GPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE----REENMLIYEYMPN-KSLDSF 581 (760)
Q Consensus 509 g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~----~~~~~lV~Ey~~~-gsL~~~ 581 (760)
.+.||+.. -+|..+++|+++....+....-..-++.++++.|+|+|++.+++.. +..+++||+|.|+ ++|.++
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 56789984 4799999999965444444445567888999999999999998873 3467999999986 455543
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.055 Score=61.49 Aligned_cols=81 Identities=15% Similarity=0.231 Sum_probs=53.9
Q ss_pred cccccCCceeEEEEEecCCcEEEEEEecccCccc----------------------------------------hHhHHH
Q 004345 501 NKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG----------------------------------------QEEFMN 540 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~----------------------------------------~~~f~~ 540 (760)
+.|+.++-|.||+|++++|+.||||+.++.-.+. +-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 6789999999999999999999999986431110 012345
Q ss_pred HHHHHhcC----CCCccceeeeEEEe-CCeeEEEEeccCCCChhhh
Q 004345 541 EVMVISNL----QHRNLVRLLGCCVE-REENMLIYEYMPNKSLDSF 581 (760)
Q Consensus 541 E~~~l~~l----~H~nIv~l~g~~~~-~~~~~lV~Ey~~~gsL~~~ 581 (760)
|+..+.++ ++.-=+++-.++.+ .....|+|||++|-.+.+.
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~ 256 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDI 256 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccH
Confidence 55555544 22333334444433 4667999999998777665
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.2 Score=48.21 Aligned_cols=77 Identities=19% Similarity=0.377 Sum_probs=56.7
Q ss_pred ccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccc-eeeeEEEeCCeeEEEEeccCCC
Q 004345 498 QLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV-RLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 498 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv-~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
+..+.|++|.+|.||+|.+. +..+|+|+-.. +..+..+..|+++|..++-.++. +++.|- +-++.|||+.|-
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~--ds~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~ 97 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR-GGEVALKVRRR--DSPRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGR 97 (201)
T ss_pred hhhhhhhcccccEEEEeecc-CceEEEEEecC--CcchhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCc
Confidence 34578999999999999986 55888887543 34567899999999988765553 344442 234569999988
Q ss_pred Chhhh
Q 004345 577 SLDSF 581 (760)
Q Consensus 577 sL~~~ 581 (760)
.|.+.
T Consensus 98 ~L~~~ 102 (201)
T COG2112 98 PLGKL 102 (201)
T ss_pred chhhh
Confidence 77654
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=91.32 E-value=0.61 Score=45.23 Aligned_cols=81 Identities=17% Similarity=0.274 Sum_probs=54.2
Q ss_pred cccccCCceeEEEEEecCCcEEEEEE-ecccCc-------cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 501 NKLGQGGFGPVYKGKLQDGQEIAVKR-LSKASG-------QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~~~vavK~-l~~~~~-------~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
..+++|+=+.+|.+.+. |..+++|. +.+.-. -..++-.+|+.+|.+++--.|..-.=+..+.....|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 46788999999999764 33455553 332211 1134567899999988644444434455577888999999
Q ss_pred cCCCChhhhh
Q 004345 573 MPNKSLDSFL 582 (760)
Q Consensus 573 ~~~gsL~~~L 582 (760)
+++..|.+.|
T Consensus 81 I~G~~lkd~l 90 (204)
T COG3642 81 IEGELLKDAL 90 (204)
T ss_pred eCChhHHHHH
Confidence 9998888664
|
|
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.52 E-value=0.39 Score=54.66 Aligned_cols=81 Identities=16% Similarity=0.299 Sum_probs=53.4
Q ss_pred cccccCCceeEEEEEecCCcEEEEEEecccCccc-------------------------------------hHhHHHHHH
Q 004345 501 NKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG-------------------------------------QEEFMNEVM 543 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~-------------------------------------~~~f~~E~~ 543 (760)
+.||.-+.|.||+|++++|+.||||+-++.-... +-+|.+|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 6799999999999999999999999865431111 113556665
Q ss_pred HHhcC----CCCcc---ceeeeEEEe-CCeeEEEEeccCCCChhhh
Q 004345 544 VISNL----QHRNL---VRLLGCCVE-REENMLIYEYMPNKSLDSF 581 (760)
Q Consensus 544 ~l~~l----~H~nI---v~l~g~~~~-~~~~~lV~Ey~~~gsL~~~ 581 (760)
-..+. .|-++ |++-.++.+ ...+.|+||||+|..+.+.
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl 292 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDL 292 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCH
Confidence 44433 45551 112223322 3467999999999887765
|
|
| >PRK10593 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.15 E-value=1.1 Score=47.50 Aligned_cols=77 Identities=10% Similarity=0.097 Sum_probs=57.5
Q ss_pred ccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCC---CccceeeeEEEeC---CeeEEEEecc
Q 004345 500 ANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH---RNLVRLLGCCVER---EENMLIYEYM 573 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H---~nIv~l~g~~~~~---~~~~lV~Ey~ 573 (760)
.+.||.|..+.||+-...+++ +.+|..+. ......|.+|.+.|+.|.- ..+.+++++|..+ +..+||||++
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i 95 (297)
T PRK10593 19 VECISEQPYAALWALYDSQGN-PMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERL 95 (297)
T ss_pred eeecCCccceeEEEEEcCCCC-EEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEecc
Confidence 468999999999998766554 56666432 1134588999999988853 4688888887643 5689999999
Q ss_pred CCCChh
Q 004345 574 PNKSLD 579 (760)
Q Consensus 574 ~~gsL~ 579 (760)
+++++.
T Consensus 96 ~G~~~~ 101 (297)
T PRK10593 96 RGVSVE 101 (297)
T ss_pred CCEecC
Confidence 988764
|
|
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=87.86 E-value=1.3 Score=54.23 Aligned_cols=79 Identities=16% Similarity=0.383 Sum_probs=58.3
Q ss_pred ccccccCCceeEEEEEecCC---cEEEEEEecccC-ccchHhHHHHHHHHhcCC-CCcc--ceeeeEEEeC---CeeEEE
Q 004345 500 ANKLGQGGFGPVYKGKLQDG---QEIAVKRLSKAS-GQGQEEFMNEVMVISNLQ-HRNL--VRLLGCCVER---EENMLI 569 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~~~~---~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~nI--v~l~g~~~~~---~~~~lV 569 (760)
.+.|+.|.++.+|+.....+ ..+++|+..... ......+.+|+++|+.+. |.++ .+++++|.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 47789999999999876553 357777654322 223457889999999995 6665 8888888764 467899
Q ss_pred EeccCCCCh
Q 004345 570 YEYMPNKSL 578 (760)
Q Consensus 570 ~Ey~~~gsL 578 (760)
|||+++..+
T Consensus 123 ME~v~G~~~ 131 (822)
T PLN02876 123 MEYLEGRIF 131 (822)
T ss_pred EEecCCccc
Confidence 999998754
|
|
| >PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli [] | Back alignment and domain information |
|---|
Probab=87.76 E-value=0.21 Score=45.15 Aligned_cols=43 Identities=23% Similarity=0.422 Sum_probs=33.4
Q ss_pred cccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHh
Q 004345 501 NKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVIS 546 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~ 546 (760)
+.|+.|+.|.||+|++++|+.||||+.++. -.+.+...+.+|.
T Consensus 17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~---i~~~i~~Dl~~l~ 59 (119)
T PF03109_consen 17 EPLASASIAQVHRARLKDGEEVAVKVQRPG---IEEQIEADLRILR 59 (119)
T ss_pred chhhheehhhheeeeecccchhhhhhcchH---HHHHHHHHHHHHH
Confidence 789999999999999999999999998643 2334455555554
|
These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins. |
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=85.72 E-value=0.17 Score=58.00 Aligned_cols=38 Identities=37% Similarity=0.669 Sum_probs=32.7
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCC
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~ 643 (760)
...|.|||++.....+.++|+||+||++|-+..|.++.
T Consensus 172 ~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i 209 (700)
T KOG2137|consen 172 HLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSI 209 (700)
T ss_pred CcccccchhhccccccccccceeeeeEEEEEecCCcch
Confidence 45799999999988999999999999999999555443
|
|
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=84.79 E-value=2.7 Score=42.98 Aligned_cols=76 Identities=12% Similarity=0.154 Sum_probs=54.6
Q ss_pred ccccCCc-eeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEEEEeccCCCChh
Q 004345 502 KLGQGGF-GPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENMLIYEYMPNKSLD 579 (760)
Q Consensus 502 ~lG~G~~-g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~ 579 (760)
.|-.|.. ..||+...+ +..+.||+..... .....+|+++++.+. |--+.+++++....+..++|||+++|.+|.
T Consensus 5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence 4455555 788998765 4678888775432 345778999888774 445667888877666789999999998876
Q ss_pred hh
Q 004345 580 SF 581 (760)
Q Consensus 580 ~~ 581 (760)
..
T Consensus 81 ~~ 82 (244)
T cd05150 81 AL 82 (244)
T ss_pred Hh
Confidence 43
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.77 E-value=2 Score=41.72 Aligned_cols=83 Identities=14% Similarity=0.233 Sum_probs=55.8
Q ss_pred cccccccCCceeEEEEEecCCcEEEEE-EecccC-------ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 499 LANKLGQGGFGPVYKGKLQDGQEIAVK-RLSKAS-------GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 499 ~~~~lG~G~~g~Vy~~~~~~~~~vavK-~l~~~~-------~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
....|-+|+=+.|+++..+ |+...|| ++.+.. .-...+-++|++++.+++--.|.--.=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 3578889999999999986 5665555 333321 112456788999999876444444444566777778999
Q ss_pred eccCC-CChhhhh
Q 004345 571 EYMPN-KSLDSFL 582 (760)
Q Consensus 571 Ey~~~-gsL~~~L 582 (760)
||+++ .++.+++
T Consensus 90 E~~~g~~~vk~~i 102 (229)
T KOG3087|consen 90 EFIDGASTVKDFI 102 (229)
T ss_pred EeccchhHHHHHH
Confidence 99977 3555553
|
|
| >PRK09550 mtnK methylthioribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=83.78 E-value=4.4 Score=44.83 Aligned_cols=75 Identities=12% Similarity=0.183 Sum_probs=55.6
Q ss_pred cccccCCceeEEEEEecCC-cEEEEEEeccc-----C--ccchHhHHHHHHHHhcCC---CCccceeeeEEEeCCeeEEE
Q 004345 501 NKLGQGGFGPVYKGKLQDG-QEIAVKRLSKA-----S--GQGQEEFMNEVMVISNLQ---HRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~-~~vavK~l~~~-----~--~~~~~~f~~E~~~l~~l~---H~nIv~l~g~~~~~~~~~lV 569 (760)
+.||.|.+..||+....+| +.|+||.-... . ....+++..|.+.|..+. -.++.+++.+ +.+..++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 6799999999999998877 58999975321 1 124567788888887762 3567788777 44667899
Q ss_pred EeccCCCC
Q 004345 570 YEYMPNKS 577 (760)
Q Consensus 570 ~Ey~~~gs 577 (760)
|||+++..
T Consensus 110 ME~L~~~~ 117 (401)
T PRK09550 110 MEDLSDHK 117 (401)
T ss_pred EecCCCcc
Confidence 99998754
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=83.47 E-value=2.5 Score=43.60 Aligned_cols=79 Identities=18% Similarity=0.232 Sum_probs=57.6
Q ss_pred cccccccccCCceeEEEEEecCCcEEEEEEecccC----------c------------cchHhHHHHHHHHhcCCCC--c
Q 004345 497 FQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS----------G------------QGQEEFMNEVMVISNLQHR--N 552 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~----------~------------~~~~~f~~E~~~l~~l~H~--n 552 (760)
..+.++||-|-=+.||.|..+.|.++|||.=+... . ..+....+|.++|.+|.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 46678999999999999999999999999532110 0 0123467899999998644 6
Q ss_pred cceeeeEEEeCCeeEEEEeccCCCChh
Q 004345 553 LVRLLGCCVEREENMLIYEYMPNKSLD 579 (760)
Q Consensus 553 Iv~l~g~~~~~~~~~lV~Ey~~~gsL~ 579 (760)
+.+.+++ +.-.+||||+++-.|.
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~ 195 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELY 195 (304)
T ss_pred CCCcccc----ccceeeeehcccceee
Confidence 6666654 4568999999875543
|
|
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=82.73 E-value=1.9 Score=43.31 Aligned_cols=78 Identities=23% Similarity=0.330 Sum_probs=56.5
Q ss_pred ccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCC--ccceeeeEEEeC---CeeEEEEeccC
Q 004345 500 ANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHR--NLVRLLGCCVER---EENMLIYEYMP 574 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~--nIv~l~g~~~~~---~~~~lV~Ey~~ 574 (760)
++.|+.|..+.||+....+ ..+++|..... .....+.+|..++..+... .+.+++.++... ...+++|++++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 3678999999999999877 68999987543 3456788899988887533 356777655333 34689999999
Q ss_pred CCChhh
Q 004345 575 NKSLDS 580 (760)
Q Consensus 575 ~gsL~~ 580 (760)
+..+..
T Consensus 79 g~~~~~ 84 (239)
T PF01636_consen 79 GRPLDD 84 (239)
T ss_dssp SEEHHH
T ss_pred cccccc
Confidence 887765
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=82.42 E-value=3.5 Score=40.53 Aligned_cols=61 Identities=23% Similarity=0.284 Sum_probs=39.5
Q ss_pred eEEEEEecCCcEEEEEEecccC-------------cc-------------chHhHHHHHHHHhcCCCC--ccceeeeEEE
Q 004345 510 PVYKGKLQDGQEIAVKRLSKAS-------------GQ-------------GQEEFMNEVMVISNLQHR--NLVRLLGCCV 561 (760)
Q Consensus 510 ~Vy~~~~~~~~~vavK~l~~~~-------------~~-------------~~~~f~~E~~~l~~l~H~--nIv~l~g~~~ 561 (760)
.||.|...++..+|||..+... .. ......+|.+.|.++..- ++.+++++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 4899999899999999875310 00 012356899999999755 56777655
Q ss_pred eCCeeEEEEeccC
Q 004345 562 EREENMLIYEYMP 574 (760)
Q Consensus 562 ~~~~~~lV~Ey~~ 574 (760)
....|||||++
T Consensus 79 --~~~~ivME~I~ 89 (188)
T PF01163_consen 79 --NRNVIVMEYIG 89 (188)
T ss_dssp --ETTEEEEE--E
T ss_pred --eCCEEEEEecC
Confidence 24579999997
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane | Back alignment and domain information |
|---|
Probab=82.25 E-value=0.58 Score=42.08 Aligned_cols=24 Identities=29% Similarity=0.519 Sum_probs=12.1
Q ss_pred EEEehhhHHHHHHHHHHhhhhhhh
Q 004345 422 VIILSVIVGIIAIAICTFFAWRWF 445 (760)
Q Consensus 422 ~ii~~~~~~~v~i~~~~~~~~~~~ 445 (760)
.|++++++|++++++++++++||+
T Consensus 68 ~Ii~gv~aGvIg~Illi~y~irR~ 91 (122)
T PF01102_consen 68 GIIFGVMAGVIGIILLISYCIRRL 91 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHH
Confidence 445555666655554444444433
|
Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A. |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=82.13 E-value=4.9 Score=39.79 Aligned_cols=73 Identities=11% Similarity=0.147 Sum_probs=50.8
Q ss_pred cccccCCceeEEEEEecC-------CcEEEEEEecccC------------c----------cchHhHH----HHHHHHhc
Q 004345 501 NKLGQGGFGPVYKGKLQD-------GQEIAVKRLSKAS------------G----------QGQEEFM----NEVMVISN 547 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~l~~~~------------~----------~~~~~f~----~E~~~l~~ 547 (760)
..||.|-=+.||.|...+ +..+|||+.+... . ...+.+. +|++.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 578999999999998553 4789999775210 0 0011233 79999998
Q ss_pred CC--CCccceeeeEEEeCCeeEEEEeccCCCC
Q 004345 548 LQ--HRNLVRLLGCCVEREENMLIYEYMPNKS 577 (760)
Q Consensus 548 l~--H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 577 (760)
+. .-++.+.+++ ..-+|||||+.+..
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~ 110 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQ 110 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCC
Confidence 85 3567777765 56689999997653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=81.77 E-value=3 Score=42.32 Aligned_cols=71 Identities=20% Similarity=0.216 Sum_probs=53.4
Q ss_pred cccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCc--cceeeeEEEeCCeeEEEEeccCCC
Q 004345 501 NKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN--LVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~n--Iv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
..||+|..+.||+.. +..+++|..... .......+|.+++..+..-. +.+.+++....+...+|||+++|.
T Consensus 7 ~~i~~G~t~~~y~~~---~~~~VlR~~~~~--~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~ 79 (226)
T TIGR02172 7 TQTGEGGNGESYTHK---TGKWMLKLYNPG--FDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK 79 (226)
T ss_pred eeecCCCCcceeEec---CCCEEEEeCCCC--CCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence 678999999999842 446778877542 23445788999998886433 467788887777888999999886
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 760 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 5e-30 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 7e-30 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 2e-24 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 5e-24 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-22 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 8e-22 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 9e-22 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-19 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-11 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 4e-11 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 6e-11 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-11 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 6e-11 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 6e-11 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 6e-11 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 7e-11 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 7e-11 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 7e-11 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 8e-11 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 8e-11 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 8e-11 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 9e-11 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 9e-11 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 1e-10 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-10 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 1e-10 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 1e-10 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 1e-10 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 2e-10 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 2e-10 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 2e-10 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-10 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 2e-10 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 2e-10 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 3e-10 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 3e-10 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 3e-10 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 3e-10 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 3e-10 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 3e-10 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 5e-10 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 5e-10 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 5e-10 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-10 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 5e-10 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 5e-10 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 6e-10 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 6e-10 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 8e-10 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 8e-10 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 8e-10 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 9e-10 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 9e-10 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 1e-09 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 1e-09 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 1e-09 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-09 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 2e-09 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 3e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 3e-09 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 3e-09 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 4e-09 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 4e-09 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 5e-09 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 5e-09 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 6e-09 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 6e-09 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 6e-09 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 7e-09 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 7e-09 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 7e-09 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 7e-09 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 8e-09 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 8e-09 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 8e-09 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 9e-09 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 9e-09 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 9e-09 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 9e-09 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 9e-09 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-08 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-08 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 1e-08 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 1e-08 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 1e-08 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-08 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 1e-08 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 1e-08 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 1e-08 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 1e-08 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 1e-08 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-08 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 1e-08 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 1e-08 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 1e-08 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 1e-08 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 1e-08 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 1e-08 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-08 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 2e-08 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 2e-08 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 2e-08 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 2e-08 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 2e-08 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 2e-08 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 2e-08 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 2e-08 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-08 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 2e-08 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 2e-08 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 3e-08 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 3e-08 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 3e-08 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 3e-08 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 3e-08 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-08 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 3e-08 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 3e-08 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 4e-08 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 4e-08 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 4e-08 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 4e-08 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-08 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 4e-08 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 5e-08 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 6e-08 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 6e-08 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 6e-08 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 7e-08 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 7e-08 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 7e-08 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 7e-08 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 8e-08 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 8e-08 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 8e-08 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 8e-08 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 9e-08 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 9e-08 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 9e-08 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 9e-08 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 1e-07 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 1e-07 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 2e-07 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-07 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 2e-07 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 2e-07 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-07 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-07 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 2e-07 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 2e-07 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 2e-07 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 2e-07 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-07 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 2e-07 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-07 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-07 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 3e-07 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-07 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 4e-07 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 4e-07 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 4e-07 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 4e-07 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 4e-07 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-07 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 4e-07 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 4e-07 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 5e-07 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 5e-07 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 5e-07 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 5e-07 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 6e-07 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 6e-07 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 6e-07 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 7e-07 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 7e-07 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 7e-07 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 7e-07 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 8e-07 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 8e-07 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 9e-07 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 9e-07 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 9e-07 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 1e-06 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 1e-06 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 1e-06 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 1e-06 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-06 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 1e-06 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 1e-06 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 1e-06 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 1e-06 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 1e-06 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 1e-06 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 1e-06 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 1e-06 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 1e-06 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 1e-06 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 2e-06 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 2e-06 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 2e-06 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-06 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-06 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-06 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 2e-06 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 2e-06 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 2e-06 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 3e-06 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 3e-06 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 3e-06 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 3e-06 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 3e-06 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 4e-06 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 4e-06 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 4e-06 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 4e-06 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 4e-06 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 4e-06 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 4e-06 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 4e-06 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 4e-06 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 4e-06 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 4e-06 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 5e-06 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 5e-06 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 5e-06 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 5e-06 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 5e-06 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 5e-06 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 5e-06 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 5e-06 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 5e-06 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 5e-06 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 5e-06 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 5e-06 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 5e-06 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 6e-06 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 6e-06 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 6e-06 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 6e-06 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 6e-06 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 6e-06 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 6e-06 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 6e-06 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 6e-06 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 7e-06 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 7e-06 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 7e-06 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 8e-06 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 8e-06 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 9e-06 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 9e-06 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 1e-05 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 1e-05 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 1e-05 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 1e-05 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 1e-05 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 1e-05 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 1e-05 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 1e-05 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 1e-05 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 1e-05 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 1e-05 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 1e-05 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 1e-05 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 1e-05 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 1e-05 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 1e-05 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 1e-05 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 1e-05 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 2e-05 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 2e-05 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 2e-05 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-05 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 2e-05 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-05 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 2e-05 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 2e-05 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 2e-05 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 2e-05 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 2e-05 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 2e-05 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 2e-05 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-05 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 2e-05 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 2e-05 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 2e-05 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 2e-05 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-05 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 2e-05 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 2e-05 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 2e-05 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 2e-05 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 2e-05 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 2e-05 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 2e-05 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 2e-05 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 2e-05 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 2e-05 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-05 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 2e-05 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-05 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-05 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 3e-05 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 3e-05 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 3e-05 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 3e-05 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 3e-05 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 3e-05 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 3e-05 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 3e-05 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 3e-05 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 3e-05 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 3e-05 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 3e-05 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 3e-05 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 3e-05 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 3e-05 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 3e-05 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 3e-05 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 3e-05 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 3e-05 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 3e-05 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 3e-05 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 3e-05 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 4e-05 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 4e-05 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 4e-05 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 4e-05 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 4e-05 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 4e-05 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 4e-05 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 4e-05 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 4e-05 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 4e-05 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 5e-05 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 6e-05 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 6e-05 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 6e-05 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 7e-05 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 8e-05 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 8e-05 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 1e-04 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 1e-04 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 1e-04 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 1e-04 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 1e-04 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 1e-04 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 1e-04 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 2e-04 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 2e-04 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 2e-04 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 2e-04 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 2e-04 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 2e-04 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 2e-04 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 2e-04 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 2e-04 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 2e-04 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 2e-04 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 2e-04 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 2e-04 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 2e-04 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 2e-04 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 2e-04 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 2e-04 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 2e-04 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 3e-04 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 3e-04 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 3e-04 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 3e-04 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 3e-04 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 3e-04 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 3e-04 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-04 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 3e-04 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 3e-04 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 3e-04 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-04 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 3e-04 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 3e-04 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 3e-04 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 3e-04 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 3e-04 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-04 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 3e-04 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 3e-04 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 3e-04 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 3e-04 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 3e-04 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 3e-04 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-04 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 3e-04 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 3e-04 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 4e-04 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 4e-04 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 4e-04 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 4e-04 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 4e-04 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 4e-04 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 4e-04 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 4e-04 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 4e-04 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 5e-04 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 5e-04 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 5e-04 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 6e-04 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 6e-04 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 6e-04 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 7e-04 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 7e-04 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 7e-04 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 7e-04 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 7e-04 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 7e-04 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 8e-04 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 8e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 319 bits (820), Expect = e-103
Identities = 84/298 (28%), Positives = 130/298 (43%), Gaps = 69/298 (23%)
Query: 481 DLLVFNFEELANATNNF------QLANKLGQGGFGPVYKGKLQDGQEIAVKRLSK----A 530
F+F EL N TNNF NK+G+GGFG VYKG + + +AVK+L+
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDIT 69
Query: 531 SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLF------- 583
+ + +++F E+ V++ QH NLV LLG + ++ L+Y YMPN SL L
Sbjct: 70 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 584 ----------------------------------------------DFGLARIFGGNQDQ 597
DFGLAR
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGY 657
T R+VGT YM+PE + G + KSD++SFGV+LLEI++G + E LL
Sbjct: 190 VMTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ--LLLDI 246
Query: 658 AWKLWNDN-NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714
++ ++ + D +D ++++ + +V C+ E RP++ V +L
Sbjct: 247 KEEIEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 309 bits (793), Expect = 2e-99
Identities = 96/291 (32%), Positives = 140/291 (48%), Gaps = 59/291 (20%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQE-EFMNEV 542
F+ EL A++NF N LG+GGFG VYKG+L DG +AVKRL + QG E +F EV
Sbjct: 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEV 78
Query: 543 MVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDF----------------- 585
+IS HRNL+RL G C+ E +L+Y YM N S+ S L +
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 586 ----GLA--------RI----------------------FG-----GNQDQAATKRLVGT 606
GLA +I FG +D T + GT
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 198
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT--SFYHEEFELTLLGYAWKLWND 664
G+++PEY G+ SEK+DVF +GV+LLE+++G++ + + ++ LL + L +
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
Query: 665 NNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715
+ LVD + + E+ + + V LLC Q +RP M VV ML +
Sbjct: 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 7e-50
Identities = 45/100 (45%), Positives = 61/100 (61%)
Query: 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMV 544
+L ATNNF +G G FG VYKG L+DG ++A+KR + S QG EEF E+
Sbjct: 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD 584
+S +H +LV L+G C ER E +LIY+YM N +L L+
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 7e-34
Identities = 37/129 (28%), Positives = 67/129 (51%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFG+++ + + GT GY+ PEY ++GR +EKSDV+SFGV+L E++ R
Sbjct: 182 DFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
Query: 644 SFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRP 703
+ L +A + N+ + +VDP +++ + + + + C+ +DRP
Sbjct: 242 VQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRP 301
Query: 704 NMPTVVSML 712
+M V+ L
Sbjct: 302 SMGDVLWKL 310
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 7e-36
Identities = 53/311 (17%), Positives = 90/311 (28%), Gaps = 95/311 (30%)
Query: 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVM 543
F +L LG+G FG K + G+ + +K L + + Q F+ EV
Sbjct: 7 FRPSDL-------IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVK 59
Query: 544 VISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD------------------- 584
V+ L+H N+++ +G + + I EY+ +L +
Sbjct: 60 VMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIAS 119
Query: 585 --------------------------------FGLARIFGGNQDQAATKR---------- 602
FGLAR+ + Q R
Sbjct: 120 GMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179
Query: 603 --LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWK 660
+VG +M+PE + EK DVFSFG++L EI+ A
Sbjct: 180 YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGR----------------VNADP 223
Query: 661 LWNDNNVIDLVDPLISESGFKMEIIRCVNVGLL-----CVQEFVKDRPNMPTVVSMLNSE 715
+ + ++ C + RP+ + L +
Sbjct: 224 DYLPRTMDFGLN---VRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL 280
Query: 716 IKDLPAAKQPA 726
L
Sbjct: 281 RMHLAGHLPLG 291
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 3e-30
Identities = 61/336 (18%), Positives = 107/336 (31%), Gaps = 101/336 (30%)
Query: 460 LDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDG 519
L L A + LQ+ + FE+L ++ +G+G FG VY G+
Sbjct: 6 LSLLSARSFPRKASQTSIFLQEWDI-PFEQL-------EIGELIGKGRFGQVYHGRWH-- 55
Query: 520 QEIAVKRL--SKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKS 577
E+A++ + + + + F EVM +H N+V +G C+ +I ++
Sbjct: 56 GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115
Query: 578 LDSF-----------------------------------------LF---------DFGL 587
L S +F DFGL
Sbjct: 116 LYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGL 175
Query: 588 ARIFGGNQDQAATKRL---VGTYGYMSPE---------YAMEGRFSEKSDVFSFGVLLLE 635
I G Q +L G +++PE + FS+ SDVF+ G + E
Sbjct: 176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE 235
Query: 636 IVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRC------VN 689
+ + +K +I + +G K + + +
Sbjct: 236 LHAREW----------------PFKTQPAEAIIWQM-----GTGMKPNLSQIGMGKEISD 274
Query: 690 VGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQP 725
+ L C ++RP ++ ML K P
Sbjct: 275 ILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHP 310
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 5e-30
Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 17/145 (11%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG-----RFSEKSDVFSFGVLLLEIVS 638
DFGLA F + T VGT YM+PE + D+++ G++L E+ S
Sbjct: 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
Query: 639 GRKNTSFYHEEFELTLLGYAWKLWNDNN--------VIDLVDPLISESGFKMEIIRCV-N 689
+E+ L + ++ + V P++ + K + +
Sbjct: 234 RCTAADGPVDEYM---LPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCE 290
Query: 690 VGLLCVQEFVKDRPNMPTVVSMLNS 714
C + R + V +
Sbjct: 291 TIEECWDHDAEARLSAGCVGERITQ 315
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 1e-29
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 6/102 (5%)
Query: 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMV 544
E L + QL +G FG V+K +L + +AVK Q + EV
Sbjct: 14 LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQS-WQNEYEVYS 71
Query: 545 ISNLQHRNLVRLLGCCVE----REENMLIYEYMPNKSLDSFL 582
+ ++H N+++ +G + LI + SL FL
Sbjct: 72 LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL 113
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 1e-29
Identities = 43/212 (20%), Positives = 79/212 (37%), Gaps = 68/212 (32%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKA--SGQGQEEFMNEVM 543
++ + ++G G FG VYKGK ++AVK L+ + Q + F NEV
Sbjct: 22 PDGQI-------TVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 544 VISNLQHRNLVRLLGCCVEREENM-LIYEYMPNKSLDSFL------FDF----------- 585
V+ +H N++ +G + ++ ++ SL L F+
Sbjct: 73 VLRKTRHVNILLFMGYS--TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTA 130
Query: 586 ----------------------------------GLARIFGGNQDQAATKRLVGTYGYMS 611
GLA ++L G+ +M+
Sbjct: 131 RGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 612 PE---YAMEGRFSEKSDVFSFGVLLLEIVSGR 640
PE +S +SDV++FG++L E+++G+
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 114 bits (286), Expect = 1e-27
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNE--V 542
E + +N +L +G+G +G VYKG L D + +AVK S A+ Q F+NE +
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEKNI 58
Query: 543 MVISNLQHRNLVRLLGCCVEREEN-----MLIYEYMPNKSLDSFLFD 584
+ ++H N+ R + + +L+ EY PN SL +L
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL 105
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 97.6 bits (243), Expect = 3e-22
Identities = 27/169 (15%), Positives = 53/169 (31%), Gaps = 24/169 (14%)
Query: 584 DFGLARIFGGN------QDQAATKRLVGTYGYMSPEYAME-------GRFSEKSDVFSFG 630
DFGL+ GN ++ A VGT YM+PE ++ D+++ G
Sbjct: 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALG 222
Query: 631 VLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD--------PLISESGFKM 682
++ EI + E + + ++ N D+ P E+ +
Sbjct: 223 LIYWEIFMRCTDLFPGESVPEY-QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKEN 281
Query: 683 EIIRCVNVGLL--CVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAFTV 729
+ + C + + R + + K + T
Sbjct: 282 SLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPTA 330
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 1e-25
Identities = 49/203 (24%), Positives = 75/203 (36%), Gaps = 65/203 (32%)
Query: 498 QLANKLGQGGFGPVYKGKLQDGQE----IAVKRLSK-ASGQGQEEFMNEVMVISNLQHRN 552
+G+G FG VY G+ D + A+K LS+ Q E F+ E +++ L H N
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 553 LVRLLGCCVEREE-NMLIYEYMPN----------------KSLDSFLF------------ 583
++ L+G + E ++ YM + K L SF
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYA 615
DFGLAR D+ + + + E
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDI---LDREYYSVQQHRHARLPVKWTALESL 200
Query: 616 MEGRFSEKSDVFSFGVLLLEIVS 638
RF+ KSDV+SFGVLL E+++
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLT 223
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 3e-25
Identities = 49/204 (24%), Positives = 77/204 (37%), Gaps = 67/204 (32%)
Query: 498 QLANKLGQGGFGPVYKGKLQDG----QEIAVKRLSK-ASGQGQEEFMNEVMVISNLQHRN 552
+G+G FG VY G L D AVK L++ +F+ E +++ + H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 553 LVRLLGCCVEREEN-MLIYEYMPN----------------KSLDSFLF------------ 583
++ LLG C+ E + +++ YM + K L F
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 147
Query: 584 -----------------------DFGLAR-IFGGNQDQAATKRLVGTYG-----YMSPEY 614
DFGLAR ++ K T +M+ E
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK----TGAKLPVKWMALES 203
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVS 638
+F+ KSDV+SFGVLL E+++
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMT 227
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-24
Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 65/203 (32%)
Query: 498 QLANKLGQGGFGPVYKGKLQDG----QEIAVKRLSK-ASGQGQEEFMNEVMVISNLQHRN 552
+G+G FG VY G L D AVK L++ +F+ E +++ + H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 553 LVRLLGCCVEREEN-MLIYEYMPN----------------KSLDSFLF------------ 583
++ LLG C+ E + +++ YM + K L F
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYA 615
DFGLAR + + + T +M+ E
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK---TGAKLPVKWMALESL 268
Query: 616 MEGRFSEKSDVFSFGVLLLEIVS 638
+F+ KSDV+SFGVLL E+++
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMT 291
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 52/252 (20%), Positives = 90/252 (35%), Gaps = 74/252 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL---QDGQEI--AVKRL-SKASGQGQEEFMNEVMVISNL 548
+ LG+G FG V DG AVK L + A Q + + E+ ++ L
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL 90
Query: 549 QHRNLVRLLGCCVEREEN--MLIYE---------YMPNKSLD---------------SFL 582
H ++++ GCC + L+ E Y+P S+ ++L
Sbjct: 91 YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYL 150
Query: 583 ----F---------------------DFGLARIFGGNQDQAATKRLVGTYG-----YMSP 612
+ DFGLA+ + V G + +P
Sbjct: 151 HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR----VREDGDSPVFWYAP 206
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671
E E +F SDV+SFGV L E+++ + S + EL + ++ + +L+
Sbjct: 207 ECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ-GQMTV-LRLTELL 264
Query: 672 DPLISESGFKME 683
E G ++
Sbjct: 265 -----ERGERLP 271
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 97.7 bits (244), Expect = 2e-22
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD--------GQEIAVKRLSKASGQGQEEFMNEVMVIS 546
+ LGQG F ++KG ++ E+ +K L KA E F ++S
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 547 NLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
L H++LV G CV +EN+L+ E++ SLD++L
Sbjct: 68 KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL 103
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 18/65 (27%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGY-----MSPEYAMEGR-FSEKSDVFSFGVLLLEIV 637
D G++ + PE + + +D +SFG L EI
Sbjct: 164 DPGISITVLPKD-----------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEIC 212
Query: 638 S-GRK 641
S G K
Sbjct: 213 SGGDK 217
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 2e-22
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKASGQGQEEFMNEVMVISNL 548
+ L +LG+G FG V+ + +D +AVK L + +++F E +++NL
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
QH ++V+ G C + + ++++EYM + L+ FL
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 3e-08
Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 37/148 (25%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG++R + VG + +M PE M +F+ +SDV+SFGV+L EI +
Sbjct: 176 DFGMSRDV---YSTDYYR--VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
Query: 639 GRKNTSFYHEEFELTLLGYA-WKLWNDNNVIDLVDPLISESGFKMEIIRCV-----NVGL 692
G W ++ VI+ + G +E R +V L
Sbjct: 231 ----------------YGKQPWFQLSNTEVIECI-----TQGRVLERPRVCPKEVYDVML 269
Query: 693 LCVQEFVKDRPNMPTVVSMLNSEIKDLP 720
C Q + R N+ + +L++ K P
Sbjct: 270 GCWQREPQQRLNIKEIYKILHALGKATP 297
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 3e-22
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE------IAVKRLSKASGQGQEEFMNEVMVISNL 548
+ L +LG+G FG V+ + + +AVK L +AS +++F E +++ L
Sbjct: 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 100
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
QH+++VR G C E ++++EYM + L+ FL
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 37/149 (24%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFG++R + G +M PE + +F+ +SDV+SFGV+L EI +
Sbjct: 201 DFGMSRDI---YSTDYYRV--GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
Query: 639 GRKNTSFYHEEFELTLLGYA-WKLWNDNNVIDLVDPLISESGFKMEI-IRCV----NVGL 692
G W ++ ID + G ++E C +
Sbjct: 256 ----------------YGKQPWYQLSNTEAIDCI-----TQGRELERPRACPPEVYAIMR 294
Query: 693 LCVQEFVKDRPNMPTVVSMLNSEIKDLPA 721
C Q + R ++ V + L + + P
Sbjct: 295 GCWQREPQQRHSIKDVHARLQALAQAPPV 323
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 1e-21
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDG------QEIAVKRLSK-ASGQGQEEFMNEVMVISN 547
+ + +LG+ FG VYKG L Q +A+K L A G +EEF +E M+ +
Sbjct: 9 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR 68
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
LQH N+V LLG + + +I+ Y + L FL
Sbjct: 69 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 30/142 (21%), Positives = 54/142 (38%), Gaps = 37/142 (26%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
D GL R K + +M+PE M G+FS SD++S+GV+L E+ S
Sbjct: 171 DLGLFREV---YAADYYK--LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
Query: 639 GRKNTSFYHEEFELTLLGYA-WKLWNDNNVIDLVDPLISESGFKMEI-IRC----VNVGL 692
G + +++ +V++++ + + C + +
Sbjct: 226 ----------------YGLQPYCGYSNQDVVEMI-----RNRQVLPCPDDCPAWVYALMI 264
Query: 693 LCVQEFVKDRPNMPTVVSMLNS 714
C EF RP + S L +
Sbjct: 265 ECWNEFPSRRPRFKDIHSRLRA 286
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 1e-21
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ ++G G FG V+ G + ++A+K + + +E+F+ E V+ L H LV
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 66
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
+L G C+E+ L+ E+M + L +L
Sbjct: 67 QLYGVCLEQAPICLVTEFMEHGCLSDYL 94
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 3e-08
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 584 DFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-G 639
DFG+ R +Q ++T GT + SPE R+S KSDV+SFGVL+ E+ S G
Sbjct: 147 DFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 202
Query: 640 RK 641
+
Sbjct: 203 KI 204
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 1e-21
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +LG G FG V GK + ++A+K + K ++EF+ E V+ NL H LV
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLV 82
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
+L G C ++ +I EYM N L ++L
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYL 110
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 2e-21
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
L +LG G FG V GK + ++AVK + K ++EF E + L H LV
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLV 66
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ G C + ++ EY+ N L ++L
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYL 94
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 6e-21
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDG------QEIAVKRL-SKASGQGQEEFMNEVMVISN 547
NN + +G+G FG V++ + +AVK L +AS Q +F E +++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ N+V+LLG C + L++EYM L+ FL
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 584 DFGLAR-IFGGNQDQAATKRLV----GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGL+R I+ + +A + M PE R++ +SDV+++GV+L EI S
Sbjct: 217 DFGLSRNIYSADYYKADGNDAIPIRW-----MPPESIFYNRYTTESDVWAYGVVLWEIFS 271
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 7e-21
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDG------QEIAVKRLSK-ASGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H+N+VR +G ++ ++ E M L SFL
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 124
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 29/142 (20%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKN 642
DFG+AR I+ + + ++ +M PE MEG F+ K+D +SFGVLL EI S
Sbjct: 186 DFGMARDIYRASYYRKGGCAMLP-VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---- 240
Query: 643 TSFYHEEFELTLLGYA-WKLWNDNNVIDLVDPLISESGFKMEIIR-CV----NVGLLCVQ 696
LGY + ++ V++ V SG +M+ + C + C Q
Sbjct: 241 ------------LGYMPYPSKSNQEVLEFV-----TSGGRMDPPKNCPGPVYRIMTQCWQ 283
Query: 697 EFVKDRPNMPTVVSMLNSEIKD 718
+DRPN ++ + +D
Sbjct: 284 HQPEDRPNFAIILERIEYCTQD 305
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 1e-20
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRL-SKASGQGQEEFMNEVMVISNLQHRN 552
+ L ++G+G FG V+ G+L+ D +AVK + +F+ E ++ H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+VRL+G C +++ ++ E + +FL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 2e-09
Identities = 33/143 (23%), Positives = 50/143 (34%), Gaps = 31/143 (21%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFG++R A+ + +PE GR+S +SDV+SFG+LL E S
Sbjct: 256 DFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS----- 310
Query: 644 SFYHEEFELTLLG---YAWKLWNDNNVIDLVDPLISESGFKMEI-----IRCVNVGLLCV 695
LG Y ++ + V E G ++ + C
Sbjct: 311 -----------LGASPYPN--LSNQQTREFV-----EKGGRLPCPELCPDAVFRLMEQCW 352
Query: 696 QEFVKDRPNMPTVVSMLNSEIKD 718
RP+ T+ L S K
Sbjct: 353 AYEPGQRPSFSTIYQELQSIRKR 375
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 2e-20
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDG------QEIAVKRLSK-ASGQGQEEFMNEVMVISN 547
N L LG G FG VY+G++ ++AVK L + S Q + +F+ E ++IS
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H+N+VR +G ++ ++ E M L SFL
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 165
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 3e-08
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 29/142 (20%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKN 642
DFG+AR I+ + ++ +M PE MEG F+ K+D +SFGVLL EI S
Sbjct: 227 DFGMARDIYRAGYYRKGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---- 281
Query: 643 TSFYHEEFELTLLGYA-WKLWNDNNVIDLVDPLISESGFKMEIIR-CV----NVGLLCVQ 696
LGY + ++ V++ V SG +M+ + C + C Q
Sbjct: 282 ------------LGYMPYPSKSNQEVLEFV-----TSGGRMDPPKNCPGPVYRIMTQCWQ 324
Query: 697 EFVKDRPNMPTVVSMLNSEIKD 718
+DRPN ++ + +D
Sbjct: 325 HQPEDRPNFAIILERIEYCTQD 346
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-20
Identities = 46/232 (19%), Positives = 81/232 (34%), Gaps = 65/232 (28%)
Query: 487 FEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKR--LSKASGQGQEEFMNEVMV 544
F+ ++ + + ++G GG V++ + Q A+K L +A Q + + NE+
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 545 ISNLQHRNL--VRLLGCCVEREENMLIYEY---------MPNKSLDS------------- 580
++ LQ + +RL + + ++ E KS+D
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA 139
Query: 581 ------------------FLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPE- 613
FL DFG+A + VGT YM PE
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 199
Query: 614 ----------YAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL 655
+ + S KSDV+S G +L + G+ T F +++ L
Sbjct: 200 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL 249
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 4e-20
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE---IAVKRL-SKASGQGQEEFMNEVMVISNL-Q 549
N+ + + +G+G FG V K +++ A+KR+ AS +F E+ V+ L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++ LLG C R L EY P+ +L FL
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 13/60 (21%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGL+R + K+ T G +M+ E ++ SDV+S+GVLL EIVS
Sbjct: 185 DFGLSR-----GQEVYVKK---TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 5e-20
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +LG G FG V+ G ++AVK L K + F+ E ++ LQH+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
RL + E +I EYM N SL FL
Sbjct: 72 RLYAVVTQ-EPIYIITEYMENGSLVDFL 98
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 6e-09
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGY--MSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR+ +D T R + +PE G F+ KSDV+SFG+LL EIV+
Sbjct: 152 DFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 5e-20
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 12/101 (11%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRL--SKASGQGQEEFMNEVM 543
+F++L KL + G ++KG+ Q G +I VK L S + +F E
Sbjct: 8 DFKQL-------NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECP 59
Query: 544 VISNLQHRNLVRLLGCCVEREEN--MLIYEYMPNKSLDSFL 582
+ H N++ +LG C LI +MP SL + L
Sbjct: 60 RLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL 100
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 4e-11
Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 17/80 (21%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR----F 620
+++I E M + + + F + + +++PE A++ +
Sbjct: 142 RSVMIDEDMTAR-----ISMADVKFSF-------QSPGRMYAPAWVAPE-ALQKKPEDTN 188
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
+D++SF VLL E+V+
Sbjct: 189 RRSADMWSFAVLLWELVTRE 208
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 6e-20
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 12/101 (11%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRL----SKASGQGQEEFMNE 541
+F EL L +G GGFG VY+ G E+AVK + Q E E
Sbjct: 5 DFAEL-------TLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQE 56
Query: 542 VMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ + L+H N++ L G C++ L+ E+ L+ L
Sbjct: 57 AKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL 97
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 1e-14
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 565 ENMLIYEYMPNKSLDSFLF---DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
N+LI + + N L + + DFGLAR + G Y +M+PE FS
Sbjct: 137 SNILILQKVENGDLSNKILKITDFGLARE----WHRTTKMSAAGAYAWMAPEVIRASMFS 192
Query: 622 EKSDVFSFGVLLLEIVSGR 640
+ SDV+S+GVLL E+++G
Sbjct: 193 KGSDVWSYGVLLWELLTGE 211
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 6e-20
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE------IAVKRLSK-ASGQGQEEFMNEVMVISN 547
++ +LGQG FG VY+G + + +A+K +++ AS + + EF+NE V+
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++VRLLG + + ++I E M L S+L
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 33/144 (22%)
Query: 584 DFGLAR-IFGGNQDQAATKRL--VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
DFG+ R I+ + + K L V +MSPE +G F+ SDV+SFGV+L EI +
Sbjct: 181 DFGMTRDIYETDYYRKGGKGLLPVR---WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-- 235
Query: 641 KNTSFYHEEFELTLLGYA-WKLWNDNNVIDLVDPLISESGFKMEI-----IRCVNVGLLC 694
L ++ ++ V+ V G ++ + +C
Sbjct: 236 --------------LAEQPYQGLSNEQVLRFV-----MEGGLLDKPDNCPDMLFELMRMC 276
Query: 695 VQEFVKDRPNMPTVVSMLNSEIKD 718
Q K RP+ ++S + E++
Sbjct: 277 WQYNPKMRPSFLEIISSIKEEMEP 300
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 6e-20
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL-----QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ 549
+ + +LG+G FG V + G+ +AVK+L ++ + +F E+ ++ +LQ
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 100
Query: 550 HRNLVRLLGCCVEREEN--MLIYEYMPNKSLDSFL 582
H N+V+ G C LI EY+P SL +L
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 135
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 4e-11
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK 641
DFGL ++ +++ + G + +PE E +FS SDV+SFGV+L E+ + +
Sbjct: 188 DFGLTKVLPQDKE-YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 246
Query: 642 NTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683
+ EF + ++I+L+ ++ ++
Sbjct: 247 KSKSPPAEFMRMIGNDKQGQMIVFHLIELL-----KNNGRLP 283
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 7e-20
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDG------QEIAVKRL-SKASGQGQEEFMNEVMVISN 547
N L LG+G FG V K +AVK L AS + ++E V+
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ H ++++L G C + +LI EY SL FL
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 9e-08
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 584 DFGLAR-IFGGNQDQAATKRL--VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGL+R ++ + ++ V +M+ E + ++ +SDV+SFGVLL EIV+
Sbjct: 193 DFGLSRDVYEEDSYVKRSQGRIPVK---WMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 8e-20
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRL--SKASGQGQEEFMNEVM 543
+ +L + K+G G FG V++ + G ++AVK L + EF+ EV
Sbjct: 35 PWCDL-------NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVA 86
Query: 544 VISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
++ L+H N+V +G + ++ EY+ SL L
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLL 125
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 2e-13
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 27/136 (19%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL+R+ ++K GT +M+PE + +EKSDV+SFGV+L E+ + +
Sbjct: 182 DFGLSRLK--ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ--- 236
Query: 644 SFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLL-----CVQEF 698
+ W + N +V + ++EI R +N + C
Sbjct: 237 ----------------QPWGNLNPAQVVA-AVGFKCKRLEIPRNLNPQVAAIIEGCWTNE 279
Query: 699 VKDRPNMPTVVSMLNS 714
RP+ T++ +L
Sbjct: 280 PWKRPSFATIMDLLRP 295
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 9e-20
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDG-QEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
+ + +KLG G +G VY+G + +AVK L K EEF+ E V+ ++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 554 VRLLGCCVEREENMLIYEYMPNKSLDSFL 582
V+LLG C +I E+M +L +L
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYL 100
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 7e-09
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 11/60 (18%)
Query: 584 DFGLARIFGGNQDQAATK-----RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGL+R+ G+ A + + +PE +FS KSDV++FGVLL EI +
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 1e-19
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL-----QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ 549
+ + +LG+G FG V + G+ +AVK+L ++ + +F E+ ++ +LQ
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69
Query: 550 HRNLVRLLGCCVEREEN--MLIYEYMPNKSLDSFL 582
H N+V+ G C LI EY+P SL +L
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 4e-11
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK 641
DFGL ++ +++ + G + +PE E +FS SDV+SFGV+L E+ + +
Sbjct: 157 DFGLTKVLPQDKE-FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
Query: 642 NTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683
+ EF + ++I+L+ ++ ++
Sbjct: 216 KSKSPPAEFMRMIGNDKQGQMIVFHLIELL-----KNNGRLP 252
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 1e-19
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL-----QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ 549
+ + ++LG+G FG V + G +AVK+L + Q +F E+ ++ L
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82
Query: 550 HRNLVRLLGCCVEREEN--MLIYEYMPNKSLDSFL 582
+V+ G L+ EY+P+ L FL
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL 117
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 3e-11
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 23/169 (13%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLA++ ++D V G + +PE + FS +SDV+SFGV+L E+ +
Sbjct: 170 DFGLAKLLPLDKDYYV----VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
Query: 639 -GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI-----IRCVNVGL 692
K S L ++G + + +++L+ E G ++ +
Sbjct: 226 YCDK--SCSPSAEFLRMMGCERDVPALSRLLELL-----EEGQRLPAPPACPAEVHELMK 278
Query: 693 LCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAFT-VRRGAYDSASSS 740
LC +DRP+ + L+ + AFT G + S S S
Sbjct: 279 LCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAFTAHPEGKHHSLSFS 327
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 2e-19
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE----IAVKRLSK--ASGQGQEEFMNEVMVISNL 548
N L LG+G FG V +G L+ +AVK + +S + EEF++E + +
Sbjct: 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF 93
Query: 549 QHRNLVRLLGCCVERE-----ENMLIYEYMPNKSLDSFL 582
H N++RLLG C+E + M+I +M L ++L
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 7e-08
Identities = 29/148 (19%), Positives = 56/148 (37%), Gaps = 37/148 (25%)
Query: 584 DFGLAR-IFGGNQDQAATKRL--VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
DFGL++ I+ G+ + V +++ E + ++ KSDV++FGV + EI +
Sbjct: 190 DFGLSKKIYSGDYYRQGRIAKMPVK---WIAIESLADRVYTSKSDVWAFGVTMWEIAT-- 244
Query: 641 KNTSFYHEEFELTLLG---YAWKLWNDNNVIDLVDPLISESGFKMEI-IRC----VNVGL 692
G Y ++ + D + G +++ C +
Sbjct: 245 --------------RGMTPYPG--VQNHEMYDYL-----LHGHRLKQPEDCLDELYEIMY 283
Query: 693 LCVQEFVKDRPNMPTVVSMLNSEIKDLP 720
C + DRP + L ++ LP
Sbjct: 284 SCWRTDPLDRPTFSVLRLQLEKLLESLP 311
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 2e-19
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +G+G FG V G + G ++AVK + + + F+ E V++ L+H NLV
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLV 77
Query: 555 RLLGCCVEREEN-MLIYEYMPNKSLDSFL 582
+LLG VE + ++ EYM SL +L
Sbjct: 78 QLLGVIVEEKGGLYIVTEYMAKGSLVDYL 106
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 18/65 (27%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG------YMSPEYAMEGRFSEKSDVFSFGVLLLEIV 637
DFGL + + ++T + +PE E +FS KSDV+SFG+LL EI
Sbjct: 160 DFGLTK------EASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 208
Query: 638 S-GRK 641
S GR
Sbjct: 209 SFGRV 213
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 2e-19
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE-----IAVKRLSKASGQGQ-EEFMNEVMVISNL 548
F+ LG G FG VYKG E +A+K L +A+ +E ++E V++++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ ++ RLLG C+ LI + MP L ++
Sbjct: 75 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYV 107
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 4e-19
Identities = 44/224 (19%), Positives = 77/224 (34%), Gaps = 65/224 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSK--ASGQGQEEFMNEVMVISNLQHRN 552
+ + ++G GG V++ + Q A+K ++ A Q + + NE+ ++ LQ +
Sbjct: 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 553 L--VRLLGCCVEREENMLIYEY---------MPNKSLDS--------------------- 580
+RL + + ++ E KS+D
Sbjct: 69 DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 128
Query: 581 ----------FLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPE--------- 613
FL DFG+A + VGT YM PE
Sbjct: 129 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 188
Query: 614 --YAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL 655
+ + S KSDV+S G +L + G+ T F +++ L
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL 230
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 4e-19
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 475 NPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQ 533
+ L E+ + ++G+GGFG V+KG+L D +A+K L +
Sbjct: 6 SEFPKSRLPTLADNEI-------EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE 58
Query: 534 GQ-------EEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
G+ +EF EV ++SNL H N+V+L G ++ E++P L L
Sbjct: 59 GETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL 112
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 2e-14
Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 30/157 (19%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPE--YAMEGRFSE 622
N+ + N + + + DFGL++ + L+G + +M+PE A E ++E
Sbjct: 153 PNIFLQSLDENAPVCAKVADFGLSQQ-----SVHSVSGLLGNFQWMAPETIGAEEESYTE 207
Query: 623 KSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682
K+D +SF ++L I++G + E + + I E G +
Sbjct: 208 KADTYSFAMILYTILTGEG---PFD---EYSYGKIKFINM------------IREEGLRP 249
Query: 683 EIIRCVNVGLL-----CVQEFVKDRPNMPTVVSMLNS 714
I L C K RP+ +V L+
Sbjct: 250 TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 90.2 bits (224), Expect = 4e-19
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
+ + +KLG G +G VY+G + +AVK L K EEF+ E V+ ++H NL
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 278
Query: 554 VRLLGCCVEREENMLIYEYMPNKSLDSFL 582
V+LLG C +I E+M +L +L
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYL 307
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 6e-10
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 26/134 (19%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFGL+R+ G+ A + +PE +FS KSDV++FGVLL EI +
Sbjct: 361 DFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT--YGM 417
Query: 644 SFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIR-CV----NVGLLCVQEF 698
S Y + + V +L+ E ++ME C + C Q
Sbjct: 418 SPYPG-------------IDLSQVYELL-----EKDYRMERPEGCPEKVYELMRACWQWN 459
Query: 699 VKDRPNMPTVVSML 712
DRP+ +
Sbjct: 460 PSDRPSFAEIHQAF 473
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 4e-19
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE-----IAVKRLSK-ASGQGQEEFMNEVMVISNL 548
+ +G G FG VYKG L+ +A+K L + + + +F+ E ++
Sbjct: 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++RL G + + M+I EYM N +LD FL
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFL 137
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 5e-09
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 12/65 (18%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG------YMSPEYAMEGRFSEKSDVFSFGVLLLEIV 637
DFGL+R+ + + T G + +PE +F+ SDV+SFG+++ E++
Sbjct: 190 DFGLSRVLEDDPEATYTTS-----GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVM 244
Query: 638 S-GRK 641
+ G +
Sbjct: 245 TYGER 249
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 4e-19
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ--DGQEI--AVKRL-SKASGQGQEEFMNEVMVISNLQ 549
+ + +G G G V G+L+ +++ A+K L + + + + +F++E ++
Sbjct: 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++RL G M++ EYM N SLD+FL
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 6e-09
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 12/65 (18%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG------YMSPEYAMEGRFSEKSDVFSFGVLLLEIV 637
DFGL+R+ + D A T G + +PE FS SDV+SFGV++ E++
Sbjct: 194 DFGLSRVLEDDPDAAYTTT-----GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
Query: 638 S-GRK 641
+ G +
Sbjct: 249 AYGER 253
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 6e-19
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ--DGQEI--AVKRLSK-ASGQGQEEFMNEVMVISNLQ 549
N + +G G FG V G+L+ +EI A+K L + + + +F+ E ++
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++RL G + + M++ EYM N SLDSFL
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 1e-08
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 584 DFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-G 639
DFGL R+ + + A T R G + SPE +F+ SDV+S+G++L E++S G
Sbjct: 190 DFGLGRVLEDDPEAAYTTR--GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 640 RK 641
+
Sbjct: 248 ER 249
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 6e-19
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE------IAVKRL-SKASGQGQEEFMNEVMVISN 547
NN Q LG G FG V + + +AVK L S A +E M+E+ ++S+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 548 L-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
L QH N+V LLG C ++I EY L +FL
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 6e-08
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR I + + +M+PE + ++ +SDV+S+G+LL EI S
Sbjct: 207 DFGLARDIMNDSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 7e-19
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL-----QDGQEIAVKRL-SKASGQGQEEFMNEVMVISNL 548
+ LG+G FG V + G+++AVK L ++ G + E+ ++ NL
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 80
Query: 549 QHRNLVRLLGCCVEREEN--MLIYEYMPNKSLDSFL 582
H N+V+ G C E N LI E++P+ SL +L
Sbjct: 81 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 116
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 11/103 (10%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTY--GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GR 640
DFGL + +++ T + + +PE M+ +F SDV+SFGV L E+++
Sbjct: 169 DFGLTKAIETDKE-YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD 227
Query: 641 KNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683
++S ++ + +++ + + G ++
Sbjct: 228 SDSSPMALFLKMIGPTHGQ--MTVTRLVNTL-----KEGKRLP 263
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 88.3 bits (219), Expect = 8e-19
Identities = 44/225 (19%), Positives = 76/225 (33%), Gaps = 67/225 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKR--LSKASGQGQEEFMNEVMVISNLQHRN 552
+ + ++G GG V++ + Q A+K L +A Q + + NE+ ++ LQ +
Sbjct: 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 553 L--VRLLGCCVEREENMLIYEYMPNKSLDS------------------------------ 580
+RL + + ++ E N L+S
Sbjct: 116 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 581 -----------FLF--------DFGLARIFGGNQDQAATKRLVGTYGYMSPE-------- 613
FL DFG+A + VG YM PE
Sbjct: 175 GIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSS 234
Query: 614 ---YAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL 655
+ + S KSDV+S G +L + G+ T F +++ L
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL 277
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 8e-19
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE------IAVKRL-SKASGQGQEEFMNEVMVISN 547
N LG G FG V + + +AVK L A +E M+E+ V+S
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 548 L-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
L H N+V LLG C ++I EY L +FL
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR I + + +M+PE ++ +SDV+S+G+ L E+ S
Sbjct: 188 DFGLARDIKNDSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 9e-19
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE-----IAVKRLSKASGQGQ-EEFMNEVMVISNL 548
+ LG G FG V+KG E + +K + SG+ + + ++ I +L
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H ++VRLLG C L+ +Y+P SL +
Sbjct: 73 DHAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHV 105
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 87.5 bits (217), Expect = 1e-18
Identities = 41/201 (20%), Positives = 75/201 (37%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
+ K+G+G FG K +DG++ +K +S+ S + +EE EV V++N++H
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDS------------------------------- 580
N+V+ E ++ +Y L
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143
Query: 581 -------------FLFDFGLARI--FG------GNQDQAATKRLVGTYGYMSPEYAMEGR 619
FL G ++ FG + A +GT Y+SPE
Sbjct: 144 RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA--CIGTPYYLSPEICENKP 201
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
++ KSD+++ G +L E+ + +
Sbjct: 202 YNNKSDIWALGCVLYELCTLK 222
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 1e-18
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDG----QEIAVKRLSK--ASGQGQEEFMNEVMVISNL 548
F L LG+G FG V + +L+ ++AVK L + EEF+ E +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 549 QHRNLVRLLGCCVEREEN------MLIYEYMPNKSLDSFL 582
H ++ +L+G + M+I +M + L +FL
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL 122
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 8e-08
Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 37/154 (24%)
Query: 584 DFGLAR-IFGGNQDQAATKRL--VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
DFGL+R I+ G+ + V +++ E + ++ SDV++FGV + EI++
Sbjct: 180 DFGLSRKIYSGDYYRQGCASKLPVK---WLALESLADNLYTVHSDVWAFGVTMWEIMT-- 234
Query: 641 KNTSFYHEEFELTLLG---YAWKLWNDNNVIDLVDPLISESGFKMEI-IRC----VNVGL 692
G YA + + + + G +++ C ++
Sbjct: 235 --------------RGQTPYAG--IENAEIYNYL-----IGGNRLKQPPECMEEVYDLMY 273
Query: 693 LCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPA 726
C K RP+ + L + + L
Sbjct: 274 QCWSADPKQRPSFTCLRMELENILGHLSVLSTSQ 307
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 1e-18
Identities = 40/200 (20%), Positives = 77/200 (38%), Gaps = 57/200 (28%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHRNL 553
+ ++G+G F VYKG + E+A + K + ++ F E ++ LQH N+
Sbjct: 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 87
Query: 554 VRLLGCCV---EREENMLIY-EYMPNKSLDSFLFDFGL---------------------- 587
VR + ++ +++ E M + +L ++L F +
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 147
Query: 588 ------------ARIF--GGN-------------QDQAATKRLVGTYGYMSPEYAMEGRF 620
IF G + + K ++GT +M+PE E +
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK-Y 206
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
E DV++FG+ +LE+ +
Sbjct: 207 DESVDVYAFGMCMLEMATSE 226
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 1e-18
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +G+G FG V G + G ++AVK + + + F+ E V++ L+H NLV
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLV 249
Query: 555 RLLGCCVEREEN-MLIYEYMPNKSLDSFL 582
+LLG VE + ++ EYM SL +L
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYL 278
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 4e-07
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 15/60 (25%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG-----YMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGL + + ++T+ G + +PE E +FS KSDV+SFG+LL EI S
Sbjct: 332 DFGLTK------EASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 84.9 bits (211), Expect = 2e-18
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ--DGQEI--AVKRLSK-ASGQGQEEFMNEVMVISNLQ 549
+ L LG+G FG VY+G G++I AVK K + +E+FM+E +++ NL
Sbjct: 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 71
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H ++V+L+G E E +I E P L +L
Sbjct: 72 HPHIVKLIGII-EEEPTWIIMELYPYGELGHYL 103
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 2e-18
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD--------GQEIAVKRL-SKASGQGQEEFMNEVMVI 545
+ L LG+G FG V + +AVK L A+ + + ++E+ ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 178
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 1e-07
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 584 DFGLAR-IFGGNQDQAATKRLV----GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR I + + T + M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 246 DFGLARDINNIDYYKKTTNGRLPVKW-----MAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 2e-18
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD--------GQEIAVKRL-SKASGQGQEEFMNEVMVI 545
+ L LG+G FG V + +AVK L A+ + + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 9e-08
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 584 DFGLAR-IFGGNQDQAATKRLV----GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR I + + T + M+PE + ++ +SDV+SFGVL+ EI +
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKW-----MAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 87.5 bits (217), Expect = 2e-18
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLG G FG V+ ++AVK + K E F+ E V+ LQH LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
+L + E +I E+M SL FL
Sbjct: 247 KLHAVVTK-EPIYIITEFMAKGSLLDFL 273
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 3e-09
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 41/153 (26%)
Query: 584 DFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-G 639
DFGLAR+ N+ A G + +PE G F+ KSDV+SFG+LL+EIV+ G
Sbjct: 327 DFGLARVIEDNEYTARE----GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 382
Query: 640 RKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI-IRC----VNVGLLC 694
R Y ++ VI + E G++M C N+ + C
Sbjct: 383 RI--------------PYPG--MSNPEVIRAL-----ERGYRMPRPENCPEELYNIMMRC 421
Query: 695 VQEFVKDRPNMPTVVSML-------NSEIKDLP 720
+ ++RP + S+L S+ +++P
Sbjct: 422 WKNRPEERPTFEYIQSVLDDFYTATESQYEEIP 454
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 3e-18
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE------IAVKRL-SKASGQGQEEFMNEVMVISN 547
N + LG G FG V + +AVK L KA +E M+E+ +++
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 548 L-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
L H N+V LLG C LI+EY L ++L
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 584 DFGLAR-IFGGNQDQAATKRL--VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR I + V +M+PE EG ++ KSDV+S+G+LL EI S
Sbjct: 215 DFGLARDIMSDSNYVVRGNARLPVK---WMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 3e-18
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE-----IAVKRLSKASGQGQ-EEFMNEVMVISNL 548
F+ LG G FG VYKG E +A+K L +A+ +E ++E V++++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ ++ RLLG C+ LI + MP L ++
Sbjct: 75 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYV 107
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 3e-18
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQ--DGQEI--AVKRLSK-ASGQGQEEFMNEVMVISNLQ 549
+L +G+G FG V++G + + A+K S +E+F+ E + +
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H ++V+L+G +I E L SFL
Sbjct: 75 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFL 106
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 3e-18
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
++ +G+G FG V K K + +++A+K++ S ++ F+ E+ +S + H N+V
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIV 64
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
+L G C L+ EY SL + L
Sbjct: 65 KLYGAC--LNPVCLVMEYAEGGSLYNVL 90
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 4e-15
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 23/144 (15%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNT 643
DFG A + T G+ +M+PE +SEK DVFS+G++L E+++ RK
Sbjct: 149 DFGTAC----DIQTHMTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK-- 201
Query: 644 SFYHEEFELTLLGYAWKLWNDN--NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKD 701
+ +E W + N +I + I ++ C +
Sbjct: 202 -PF-DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIE------SLMTR------CWSKDPSQ 247
Query: 702 RPNMPTVVSMLNSEIKDLPAAKQP 725
RP+M +V ++ ++ P A +P
Sbjct: 248 RPSMEEIVKIMTHLMRYFPGADEP 271
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 5e-18
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD--------GQEIAVKRL-SKASGQGQEEFMNEVMVI 545
+ L LG+G FG V + ++AVK L S A+ + + ++E+ ++
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 166
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 584 DFGLAR-IFGGNQDQAATKRL--VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR I + + T V +M+PE + ++ +SDV+SFGVLL EI +
Sbjct: 234 DFGLARDIHHIDYYKKTTNGRLPVK---WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 5e-18
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD------GQEIAVKRL-SKASGQGQEEFMNEVMVISN 547
+ +L LG+G FG V + + +AVK L A+ M+E+ ++ +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 548 L-QHRNLVRLLGCCVEREE-NMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 584 DFGLAR-IFGGNQDQAATKRL--VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR I+ + +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 191 DFGLARDIYKDPDYVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 7e-18
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 495 NNFQLANKLGQGGFGPVYKG--KLQDGQEI--AVKRL---SKASGQGQEEFMNEVMVISN 547
+ +L KLG G FG V +G G+ + AVK L + + ++F+ EV + +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
L HRNL+RL G + ++ E P SL L
Sbjct: 78 LDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRL 111
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 9e-09
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 584 DFGLARIFGGNQDQAATKRLVGT---YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-G 639
DFGL R N D + + + +PE FS SD + FGV L E+ + G
Sbjct: 164 DFGLMRALPQNDDHYVMQE--HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 221
Query: 640 RK 641
++
Sbjct: 222 QE 223
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 86.5 bits (214), Expect = 8e-18
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 325
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
+L E E ++ EYM SL FL
Sbjct: 326 QLYAVVSE-EPIYIVTEYMSKGSLLDFL 352
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 61.8 bits (150), Expect = 5e-10
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 28/137 (20%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKN 642
DFGLAR+ N+ A + +PE A+ GRF+ KSDV+SFG+LL E+ + GR
Sbjct: 406 DFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV- 463
Query: 643 TSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCV-----NVGLLCVQE 697
+ + V+D V E G++M ++ C ++
Sbjct: 464 ---------------PYPGMVNREVLDQV-----ERGYRMPCPPECPESLHDLMCQCWRK 503
Query: 698 FVKDRPNMPTVVSMLNS 714
++RP + + L
Sbjct: 504 EPEERPTFEYLQAFLED 520
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 85.6 bits (212), Expect = 1e-17
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ L+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL 582
+L E E ++ EYM SL FL
Sbjct: 243 QLYAVVSE-EPIYIVTEYMSKGSLLDFL 269
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 9e-10
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 28/137 (20%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKN 642
DFGLAR+ N+ A + +PE A+ GRF+ KSDV+SFG+LL E+ + GR
Sbjct: 323 DFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV- 380
Query: 643 TSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCV-----NVGLLCVQE 697
+ + V+D V E G++M ++ C ++
Sbjct: 381 ---------------PYPGMVNREVLDQV-----ERGYRMPCPPECPESLHDLMCQCWRK 420
Query: 698 FVKDRPNMPTVVSMLNS 714
++RP + + L
Sbjct: 421 EPEERPTFEYLQAFLED 437
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 1e-17
Identities = 43/204 (21%), Positives = 77/204 (37%), Gaps = 60/204 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRL---SKASGQGQEEFMNEVMVISNLQH 550
NF++ K+G+G F VY+ L DG +A+K++ + + + + E+ ++ L H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDS------------------------------ 580
N+++ +E E ++ E L
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 581 ----------------FLFDFGLARI--FG------GNQDQAATKRLVGTYGYMSPEYAM 616
F+ G+ ++ G A + LVGT YMSPE
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPERIH 209
Query: 617 EGRFSEKSDVFSFGVLLLEIVSGR 640
E ++ KSD++S G LL E+ + +
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQ 233
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 1e-17
Identities = 44/213 (20%), Positives = 78/213 (36%), Gaps = 60/213 (28%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMN 540
+F + + + +Q KLG G +G V + E A+K + K S + +
Sbjct: 26 MFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE 85
Query: 541 EVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL---------------------- 578
EV V+ L H N+++L ++ L+ E L
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV 145
Query: 579 -------------------DSFLF------------DFGLARIFGGNQDQAATKRLVGTY 607
++ L DFGL+ +F + K +GT
Sbjct: 146 LSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGTA 202
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
Y++PE + ++ EK DV+S GV+L +++G
Sbjct: 203 YYIAPE-VLRKKYDEKCDVWSIGVILFILLAGY 234
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 2e-17
Identities = 48/211 (22%), Positives = 75/211 (35%), Gaps = 60/211 (28%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEV 542
N + + LG+G FG V K K QE AVK ++KA + + EV
Sbjct: 13 NLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREV 72
Query: 543 MVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL------------------------ 578
++ L H N+++L + ++ E L
Sbjct: 73 ELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS 132
Query: 579 -----------------DSFLF------------DFGLARIFGGNQDQAATKRLVGTYGY 609
++ L DFGL+ F N K +GT Y
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---KDRIGTAYY 189
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
++PE + G + EK DV+S GV+L ++SG
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVILYILLSGT 219
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 84.5 bits (209), Expect = 4e-17
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 495 NNFQLANKLGQGGFGPVYKG--KLQDGQEI--AVKRL-SKASGQGQEEFMNEVMVISNLQ 549
+L +G+G FG V++G + + A+K + S +E+F+ E + +
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H ++V+L+G +I E L SFL
Sbjct: 450 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFL 481
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 4e-17
Identities = 53/227 (23%), Positives = 85/227 (37%), Gaps = 66/227 (29%)
Query: 476 PARLQDLL-----VFNFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSK 529
P + D L +F A ++ ++ LG+G FG V K GQE AVK +SK
Sbjct: 2 PGSMMDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK 61
Query: 530 A---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL-------- 578
+E + EV ++ L H N+++L ++ L+ E L
Sbjct: 62 RQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK 121
Query: 579 ---------------------------------DSFLF------------DFGLARIFGG 593
++ L DFGL+ F
Sbjct: 122 RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181
Query: 594 NQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
++ K +GT Y++PE + G + EK DV+S GV+L ++SG
Sbjct: 182 SKKM---KDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGC 224
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 6e-17
Identities = 39/209 (18%), Positives = 66/209 (31%), Gaps = 64/209 (30%)
Query: 489 ELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVK--RLSKASGQGQEEFMNEVMVI 545
E + ++G+G FG V++ K Q G + AVK RL + E++
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-------VEELVAC 104
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF------------------------ 581
+ L +V L G E + E + SL
Sbjct: 105 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLE 164
Query: 582 ---------------------------LFDFGLA-RIFGGNQDQAATKR--LVGTYGYMS 611
L DFG A + ++ + GT +M+
Sbjct: 165 YLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMA 224
Query: 612 PEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
PE M K D++S ++L +++G
Sbjct: 225 PEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 7e-17
Identities = 42/195 (21%), Positives = 76/195 (38%), Gaps = 56/195 (28%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+ K+GQG G VY + GQE+A+++++ +E +NE++V+ ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSF---------------------------------- 581
L + +E ++ EY+ SL
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 141
Query: 582 ---------------LFDFGLARIFGGNQDQAATKR--LVGTYGYMSPEYAMEGRFSEKS 624
L DFG F +KR +VGT +M+PE + K
Sbjct: 142 IKSDNILLGMDGSVKLTDFG----FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 625 DVFSFGVLLLEIVSG 639
D++S G++ +E++ G
Sbjct: 198 DIWSLGIMAIEMIEG 212
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 7e-17
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 502 KLGQGGFGPVYKGKLQDGQE---IAVKRLSK-ASGQGQEEFMNEVMVISNLQHRNLVRLL 557
+LG G FG V +G + ++ +A+K L + EE M E ++ L + +VRL+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 558 GCCVEREENMLIYEYMPNKSLDSFL 582
G C + E ML+ E L FL
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFL 100
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 6e-08
Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 38/153 (24%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG------YMSPEYAMEGRFSEKSDVFSFGVLLLEIV 637
DFGL++ G + + + +PE +FS +SDV+S+GV + E +
Sbjct: 153 DFGLSKALGADDSYYTARS-----AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 207
Query: 638 S-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI-IRCV----NVG 691
S G+K +K V+ + E G +ME C +
Sbjct: 208 SYGQK----------------PYKKMKGPEVMAFI-----EQGKRMECPPECPPELYALM 246
Query: 692 LLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQ 724
C +DRP+ TV + + L + +
Sbjct: 247 SDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE 279
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 1e-16
Identities = 42/195 (21%), Positives = 75/195 (38%), Gaps = 56/195 (28%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
K+G+G G V + G+++AVK + Q +E NEV+++ + QH N+V
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSF---------------------------------- 581
+ + EE ++ E++ +L
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 582 ---------------LFDFGLARIFGGNQDQAATKR--LVGTYGYMSPEYAMEGRFSEKS 624
L DFG F + KR LVGT +M+PE ++ +
Sbjct: 167 IKSDSILLTLDGRVKLSDFG----FCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEV 222
Query: 625 DVFSFGVLLLEIVSG 639
D++S G++++E+V G
Sbjct: 223 DIWSLGIMVIEMVDG 237
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 1e-16
Identities = 44/219 (20%), Positives = 72/219 (32%), Gaps = 77/219 (35%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLS-KASGQGQEEFMNEVMVISNLQHRN 552
+F+ LG+GGFG V++ K D A+KR+ +E+ M EV ++ L+H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 553 LVRLLGCCVEREE---------NMLIY---EYMPNKSLDS-------------------- 580
+VR +E+ + +Y + ++L
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 581 -------------------------FLFDFGLARI--FG----------------GNQDQ 597
F + ++ FG
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEI 636
A VGT YMSPE +S K D+FS G++L E+
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 4e-16
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 495 NNFQLANK-LGQGGFGPVYKGKLQDG---QEIAVKRLSKA--SGQGQEEFMNEVMVISNL 548
L +K LG G FG V KG Q + +AVK L ++E + E V+ L
Sbjct: 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 75
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
+ +VR++G C E E ML+ E L+ +L
Sbjct: 76 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL 108
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 2e-08
Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 38/153 (24%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYG------YMSPEYAMEGRFSEKSDVFSFGVLLLEIV 637
DFGL++ +++ + + +PE +FS KSDV+SFGVL+ E
Sbjct: 160 DFGLSKALRADENYYKAQT-----HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 214
Query: 638 S-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI-----IRCVNVG 691
S G+K ++ + V ++ E G +M ++
Sbjct: 215 SYGQK----------------PYRGMKGSEVTAML-----EKGERMGCPAGCPREMYDLM 253
Query: 692 LLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQ 724
LC V++RP V L + D+
Sbjct: 254 NLCWTYDVENRPGFAAVELRLRNYYYDVVNEGH 286
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 5e-16
Identities = 46/205 (22%), Positives = 71/205 (34%), Gaps = 60/205 (29%)
Query: 485 FNFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNE 541
N + + LG+G FG V K K QE AVK ++KA + + E
Sbjct: 12 ENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE 71
Query: 542 VMVISNLQHRNLVRLLGCCVEREENMLIYEYMP--------------------------- 574
V ++ L H N+++L + ++ E
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF 131
Query: 575 ------------------------NKSLDSFL--FDFGLARIFGGNQDQAATKRLVGTYG 608
+K D + DFGL+ F N K +GT
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAY 188
Query: 609 YMSPEYAMEGRFSEKSDVFSFGVLL 633
Y++PE + G + EK DV+S GV+L
Sbjct: 189 YIAPE-VLRGTYDEKCDVWSAGVIL 212
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 80.8 bits (199), Expect = 6e-16
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 502 KLGQGGFGPVYKGKLQDGQE---IAVKRL-SKASGQGQEEFMNEVMVISNLQHRNLVRLL 557
+LG G FG V +G + ++ +A+K L EE M E ++ L + +VRL+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 558 GCCVEREENMLIYEYMPNKSLDSFL 582
G C + E ML+ E L FL
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFL 426
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 34/159 (21%)
Query: 584 DFGLARIFGGNQD----QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS- 638
DFGL++ G + ++A K + + +PE +FS +SDV+S+GV + E +S
Sbjct: 479 DFGLSKALGADDSYYTARSAGKWPLK---WYAPECINFRKFSSRSDVWSYGVTMWEALSY 535
Query: 639 GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI-IRCV----NVGLL 693
G+K +K V+ + E G +ME C +
Sbjct: 536 GQK----------------PYKKMKGPEVMAFI-----EQGKRMECPPECPPELYALMSD 574
Query: 694 CVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAFTVRRG 732
C +DRP+ TV + + L + + +
Sbjct: 575 CWIYKWEDRPDFLTVEQRMRACYYSLASKVEGGSALEVA 613
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 7e-16
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 498 QLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNE--VMVISNLQHRNLVR 555
L +G+G +G V++G Q G+ +AVK S + ++ + E + L+H N++
Sbjct: 11 TLLECVGKGRYGEVWRGSWQ-GENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILG 66
Query: 556 LLGCCVEREEN----MLIYEYMPNKSLDSFL 582
+ + + LI Y SL +L
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYL 97
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 584 DFGLARIF--GGNQDQAATKRLVGTYGYMSPE------YAMEGRFSEKSDVFSFGVLLLE 635
D GLA + NQ VGT YM+PE ++ D+++FG++L E
Sbjct: 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
Query: 636 IVSGRKNTSFYHEEFEL 652
+ R ++ E+++
Sbjct: 216 VAR-RMVSNGIVEDYKP 231
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 2e-15
Identities = 41/224 (18%), Positives = 82/224 (36%), Gaps = 71/224 (31%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA------------ 530
++ ++ ++ KLG G +G V K E A+K + K+
Sbjct: 25 MYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNK 84
Query: 531 -SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL----------- 578
+ EE NE+ ++ +L H N+++L +++ L+ E+ L
Sbjct: 85 NIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFD 144
Query: 579 ------------------------------DSFLF------------DFGLARIFGGNQD 596
++ L DFGL+ F +
Sbjct: 145 ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204
Query: 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
+ +GT Y++PE ++ +++EK DV+S GV++ ++ G
Sbjct: 205 L---RDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGY 244
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 44/200 (22%), Positives = 67/200 (33%), Gaps = 58/200 (29%)
Query: 496 NFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNL-QHR 551
+FQ ++LG G +G V+K +DG+ AVKR + + + EV + QH
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGL----ARI----------------- 590
VRL E L E SL +G A++
Sbjct: 118 CCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 591 ------------------------FG-----GNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
FG G G YM+PE ++G +
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV--QEGDPRYMAPE-LLQGSYG 233
Query: 622 EKSDVFSFGVLLLEIVSGRK 641
+DVFS G+ +LE+ +
Sbjct: 234 TAADVFSLGLTILEVACNME 253
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 2e-15
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 498 QLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNE--VMVISNLQHRNLVR 555
Q+ ++G+G +G V+ GK + G+++AVK + + E + ++H N++
Sbjct: 40 QMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFT---TEEASWFRETEIYQTVLMRHENILG 95
Query: 556 LLGCCVEREEN----MLIYEYMPNKSLDSFL 582
+ ++ + LI +Y N SL +L
Sbjct: 96 FIAADIKGTGSWTQLYLITDYHENGSLYDYL 126
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 2e-11
Identities = 32/146 (21%), Positives = 51/146 (34%), Gaps = 17/146 (11%)
Query: 584 DFGLARIF--GGNQDQAATKRLVGTYGYMSPE------YAMEGRFSEKSDVFSFGVLLLE 635
D GLA F N+ VGT YM PE + +D++SFG++L E
Sbjct: 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE 244
Query: 636 IVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD-----PLISESGFKMEIIRCVNV 690
+ R + EE++L + ++ ++V P E +R +
Sbjct: 245 VAR-RCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQM-G 302
Query: 691 GLL--CVQEFVKDRPNMPTVVSMLNS 714
L+ C R V L
Sbjct: 303 KLMTECWAHNPASRLTALRVKKTLAK 328
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 2e-15
Identities = 43/193 (22%), Positives = 75/193 (38%), Gaps = 55/193 (28%)
Query: 503 LGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCV 561
LG+G +G VY G+ L + IA+K + + + + E+ + +L+H+N+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 562 EREENMLIYEYMPNKSLDSFLFDF--------------------GLA---------R-IF 591
E + E +P SL + L GL R I
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 149
Query: 592 GGN----------------------QDQAATKRLVGTYGYMSPEYAMEGR--FSEKSDVF 627
G N T+ GT YM+PE +G + + +D++
Sbjct: 150 GDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIW 209
Query: 628 SFGVLLLEIVSGR 640
S G ++E+ +G+
Sbjct: 210 SLGCTIIEMATGK 222
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 76.4 bits (188), Expect = 5e-15
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 498 QLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNE--VMVISNLQHRNLVR 555
L +G+G FG V++GK + G+E+AVK S + + + E + L+H N++
Sbjct: 45 VLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILG 100
Query: 556 LLGCCVEREEN----MLIYEYMPNKSLDSFL 582
+ + L+ +Y + SL +L
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 131
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 5e-11
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 584 DFGLARIF--GGNQDQAATKRLVGTYGYMSPEYAMEG-------RFSEKSDVFSFGVLLL 634
D GLA + A VGT YM+PE ++ +++D+++ G++
Sbjct: 190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFW 248
Query: 635 EIVSGRKNTSFYHEEFEL 652
EI R + HE+++L
Sbjct: 249 EIAR-RCSIGGIHEDYQL 265
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 7e-15
Identities = 35/197 (17%), Positives = 65/197 (32%), Gaps = 57/197 (28%)
Query: 491 ANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ 549
+ + + + +LG G FG V++ G+ K ++ + NE+ +++ L
Sbjct: 47 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH 106
Query: 550 HRNLVRLLGCCVEREENMLIYE-----------------------------------YMP 574
H L+ L ++ E +LI E +M
Sbjct: 107 HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 575 NKS---LD----SFLF-----------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM 616
S LD + + DFGLA ++ K T + +PE
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVD 223
Query: 617 EGRFSEKSDVFSFGVLL 633
+D+++ GVL
Sbjct: 224 REPVGFYTDMWAIGVLG 240
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 7e-15
Identities = 35/194 (18%), Positives = 60/194 (30%), Gaps = 58/194 (29%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN 552
F LG G F V+ K G+ A+K + K+ NE+ V+ ++H N
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67
Query: 553 LVRLLGCCVEREENMLIYEYMP-------------------------------------- 574
+V L L+ + +
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI 127
Query: 575 -------------NKSLDSFL--FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR 619
+S + DFGL+++ GT GY++PE +
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKME----QNGIMSTACGTPGYVAPEVLAQKP 183
Query: 620 FSEKSDVFSFGVLL 633
+S+ D +S GV+
Sbjct: 184 YSKAVDCWSIGVIT 197
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 3e-14
Identities = 40/196 (20%), Positives = 73/196 (37%), Gaps = 59/196 (30%)
Query: 494 TNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQH 550
++N+ + +LG+G F V + G E A K ++ S + ++ E + LQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 551 RNLVRLLGCCVEREENMLIYEYMP------------------------------------ 574
N+VRL E + L+++ +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 575 ---------------NKSLDSFL--FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+K+ + + DFGLA ++ A GT GY+SPE +
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKK 181
Query: 618 GRFSEKSDVFSFGVLL 633
+S+ D+++ GV+L
Sbjct: 182 DPYSKPVDIWACGVIL 197
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 75.3 bits (185), Expect = 4e-14
Identities = 30/200 (15%), Positives = 62/200 (31%), Gaps = 64/200 (32%)
Query: 497 FQLANKLGQGGFGPVYKGK---LQDGQEIAVKRLSKASGQG-QEEFMNEVMVISNLQHRN 552
+++ + GG G +Y + +G+ + +K L + Q M E ++ + H +
Sbjct: 82 YEVKGCIAHGGLGWIYLALDRNV-NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPS 140
Query: 553 LVRLL--GCCVEREENMLIY---EYMPNKSLDSF-------------------------- 581
+V++ +R + + Y EY+ +SL
Sbjct: 141 IVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHS 200
Query: 582 ---------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
L D G + L GT G+ +PE
Sbjct: 201 IGLVYNDLKPENIMLTEEQLKLIDLGAVSRIN------SFGYLYGTPGFQAPEIV-RTGP 253
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
+ +D+++ G L +
Sbjct: 254 TVATDIYTVGRTLAALTLDL 273
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 4e-14
Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 53/194 (27%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQ-EEFMNEVMVISNLQHRNLV 554
F K+G+G FG V+KG + + +A+K + + + E+ E+ V+S +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF--------------------------------- 581
+ G ++ + +I EY+ S
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 143
Query: 582 ----------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSD 625
L DFG+A Q + T VGT +M+PE + + K+D
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDSKAD 201
Query: 626 VFSFGVLLLEIVSG 639
++S G+ +E+ G
Sbjct: 202 IWSLGITAIELARG 215
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 73.3 bits (180), Expect = 4e-14
Identities = 47/227 (20%), Positives = 79/227 (34%), Gaps = 49/227 (21%)
Query: 463 GEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKL-QDGQE 521
G+ ++ RL+ L + ++F+ ++LG G G V+K G
Sbjct: 1 GKKLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLV 60
Query: 522 IAVKRLS-KASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDS 580
+A K + + + + + E+ V+ +V G E + E+M SLD
Sbjct: 61 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 120
Query: 581 FLFDFG------LARI---------------------------------------FG--G 593
L G L ++ FG G
Sbjct: 121 VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 180
Query: 594 NQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
+ VGT YMSPE +S +SD++S G+ L+E+ GR
Sbjct: 181 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 5e-14
Identities = 40/196 (20%), Positives = 73/196 (37%), Gaps = 59/196 (30%)
Query: 494 TNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQH 550
++N+ + +LG+G F V + G E A K ++ S + ++ E + LQH
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 551 RNLVRLLGCCVEREENMLIYEYMP------------------------------------ 574
N+VRL E + L+++ +
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 147
Query: 575 ---------------NKSLDSFL--FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+K+ + + DFGLA ++ A GT GY+SPE +
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKK 204
Query: 618 GRFSEKSDVFSFGVLL 633
+S+ D+++ GV+L
Sbjct: 205 DPYSKPVDIWACGVIL 220
|
| >1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 7e-14
Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 21/126 (16%)
Query: 25 DTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNK 84
+ +T+ + + +S+ F + D N + Y+ T VW +N
Sbjct: 2 NLLTNGEGLYAGQSLDVEPYHFIMQE---DCNL------VLYDHS-----TSVWASNTGI 47
Query: 85 PLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQV 144
+ DGN VV + + + W+S+ N N L + GN+V++ +
Sbjct: 48 LGKKGC-KAVLQSDGNFVVYDAEGRSLWASHSVR--GNGNYVLVLQEDGNVVIYGS---- 100
Query: 145 SIWDSF 150
IW +
Sbjct: 101 DIWSTG 106
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 8e-14
Identities = 40/194 (20%), Positives = 65/194 (33%), Gaps = 57/194 (29%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN 552
+++ + +LG G FG V++ G A K + +E E+ +S L+H
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 553 LVRLLGCCVEREENMLIY-----------------------------------EYMPNKS 577
LV L + E ++IY +M +
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 578 ---LD----SFLF-----------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR 619
LD + +F DFGL Q + K GT + +PE A
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKP 332
Query: 620 FSEKSDVFSFGVLL 633
+D++S GVL
Sbjct: 333 VGYYTDMWSVGVLS 346
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 8e-14
Identities = 40/202 (19%), Positives = 77/202 (38%), Gaps = 63/202 (31%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+++ +LG G FG VYK K + G A K + S + E+++ E+ +++ H +V+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSF---------------------------------- 581
LLG + ++ E+ P ++D+
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 582 -----------------LFDFGLARIFGGNQDQAATKR--LVGTYGYMSPE-----YAME 617
L DFG++ + KR +GT +M+PE +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 618 GRFSEKSDVFSFGVLLLEIVSG 639
+ K+D++S G+ L+E+
Sbjct: 197 TPYDYKADIWSLGITLIEMAQI 218
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 1e-13
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
++ KLG+GGF V + L DG A+KR+ Q +EE E + H N++
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 555 RLLGCCVEREENM----LIYEYMPNKSLDSFL 582
RL+ C+ L+ + +L + +
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI 121
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 2e-13
Identities = 41/192 (21%), Positives = 68/192 (35%), Gaps = 57/192 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
LG G FG V+K + G ++A K + + +EE NE+ V++ L H NL+
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 555 RLLGC----------------------CVEREENM-------LIY------EYMPNKS-- 577
+L ++ N+ + +M
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYIL 209
Query: 578 -LD----SFLF-----------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
LD + L DFGLAR + + K GT +++PE S
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL---KVNFGTPEFLAPEVVNYDFVS 266
Query: 622 EKSDVFSFGVLL 633
+D++S GV+
Sbjct: 267 FPTDMWSVGVIA 278
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 2e-13
Identities = 40/200 (20%), Positives = 70/200 (35%), Gaps = 65/200 (32%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVK-----RLSKASGQGQEEFMNEVMVISNLQH 550
++L +G+G F V + + GQ+ AVK + + + G E+ E + L+H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 551 RNLVRLLGCC----------------------VEREENMLIY----------------EY 572
++V LL V+R + +Y Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 573 M-----------P------NKSLDSFL--FDFGLARIFGGNQDQAATKRLVGTYGYMSPE 613
P +K + + FG+A G + A + VGT +M+PE
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPE 203
Query: 614 YAMEGRFSEKSDVFSFGVLL 633
+ + DV+ GV+L
Sbjct: 204 VVKREPYGKPVDVWGCGVIL 223
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 2e-13
Identities = 38/208 (18%), Positives = 73/208 (35%), Gaps = 72/208 (34%)
Query: 491 ANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA------SGQGQEEFMNEVM 543
+ +++++ +LG G F V K + G+E A K + K G +EE EV
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 544 VISNLQHRNLVRLLGC----------------------CVERE----------------- 564
++ ++H N++ L E+E
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 120
Query: 565 ----------------ENMLIYEYMPNKSLDSF---LFDFGLARIFGGNQDQAATKRLVG 605
EN+++ +K++ + L DFG+A K + G
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLL----DKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFG 173
Query: 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLL 633
T +++PE ++D++S GV+
Sbjct: 174 TPEFVAPEIVNYEPLGLEADMWSIGVIT 201
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 3e-13
Identities = 41/199 (20%), Positives = 68/199 (34%), Gaps = 58/199 (29%)
Query: 491 ANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE--FMNEVMVISN 547
T +QL +LG+G F V + + GQE A ++ ++ E +
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL 66
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMP--------------------------------- 574
L+H N+VRL E + LI++ +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 126
Query: 575 ------------------NKSLDSFL--FDFGLARIFGGNQDQAATKRLVGTYGYMSPEY 614
+K + + DFGLA G Q GT GY+SPE
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEV 184
Query: 615 AMEGRFSEKSDVFSFGVLL 633
+ + + D+++ GV+L
Sbjct: 185 LRKDPYGKPVDLWACGVIL 203
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 3e-13
Identities = 33/196 (16%), Positives = 64/196 (32%), Gaps = 58/196 (29%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ +A LG+G FG V++ + K + G Q E+ +++ +H
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARH 60
Query: 551 RNLVRLLGCCVEREENMLIYE-----------------------------------YMPN 575
RN++ L EE ++I+E ++ +
Sbjct: 61 RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS 120
Query: 576 KS---LD----SFLF-----------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
+ D + ++ +FG AR + L Y +PE
Sbjct: 121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQH 177
Query: 618 GRFSEKSDVFSFGVLL 633
S +D++S G L+
Sbjct: 178 DVVSTATDMWSLGTLV 193
|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 8e-13
Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 21/125 (16%)
Query: 25 DTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNK 84
++++S + S+ G ++L D NF + Y+ G VW +N
Sbjct: 2 NSLSSPNSLFTGHSL-EVGPSYRLIMQG-DCNF------VLYDSG-----KPVWASNTGG 48
Query: 85 PLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQV 144
+GNLV+ + +V W + + + L N+V++
Sbjct: 49 LGSGCRLTLH--NNGNLVIYDQSNRVIWQTKTNG--KEDHYVLVLQQDRNVVIYGP---- 100
Query: 145 SIWDS 149
+W +
Sbjct: 101 VVWAT 105
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 9e-13
Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 72/208 (34%)
Query: 491 ANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS------GQGQEEFMNEVM 543
+ + + +LG G F V K + G E A K + K G +EE EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 544 VISNLQHRNLVRLLGC----------------------CVERE----------------- 564
++ + H N++ L ++E
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 565 ----------------ENMLIYEYMPNKSLDSF---LFDFGLARIFGGNQDQAATKRLVG 605
EN+++ +K++ L DFGLA K + G
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLL----DKNIPIPHIKLIDFGLAHEIEDGV---EFKNIFG 180
Query: 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLL 633
T +++PE ++D++S GV+
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVIT 208
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 1e-12
Identities = 37/207 (17%), Positives = 68/207 (32%), Gaps = 72/207 (34%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA------SGQGQEEFMNEVMV 544
N + + +LG G F V K + G + A K + K G +E+ EV +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 545 ISNLQHRNLVRLLGC----------------------CVERE------------------ 564
+ +QH N++ L E+E
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 565 ---------------ENMLIYEYMPNKSLDSF---LFDFGLARIFGGNQDQAATKRLVGT 606
EN+++ ++++ + DFGLA K + GT
Sbjct: 128 YYLHSLQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGT 180
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLL 633
+++PE ++D++S GV+
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVIT 207
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
+F+ +G GGFG V+K K DG+ +KR+ + E+ EV ++ L H N+
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66
Query: 554 VRLLGCCVEREENMLIYEYMPNKSLDSFLF 583
V GC + + ++S LF
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLF 96
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 5e-09
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK 641
DFGL N + GT YMSPE + ++ D+++ G++L E++
Sbjct: 165 DFGLVTSLK-NDGKRTR--SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD 219
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 68.4 bits (167), Expect = 2e-12
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRL-SKASGQGQEEFMNEVMVISN 547
+ +L LG+G FG V + + +AVK L A+ M+E+ ++ +
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81
Query: 548 L-QHRNLVRLLGCCVER-EENMLIYEYMPNKSLDSFL 582
+ H N+V LLG C + M+I E+ +L ++L
Sbjct: 82 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 1e-07
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS 638
DFGLAR + D +M+PE + ++ +SDV+SFGVLL EI S
Sbjct: 236 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 3e-12
Identities = 39/196 (19%), Positives = 74/196 (37%), Gaps = 52/196 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN 552
F + KLG+G +G VYK + GQ +A+K++ +E + E+ ++ +
Sbjct: 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPH 85
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDF------------------GLA------ 588
+V+ G + + ++ EY S+ + GL
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 589 RI---------------------FG--GNQDQAATKR--LVGTYGYMSPEYAMEGRFSEK 623
+I FG G KR ++GT +M+PE E ++
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCV 205
Query: 624 SDVFSFGVLLLEIVSG 639
+D++S G+ +E+ G
Sbjct: 206 ADIWSLGITAIEMAEG 221
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 4e-12
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 494 TNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKR--LSKASGQGQEEFMNEVMVISNL-Q 549
T F K+G G FG V+K K DG A+KR A ++ + EV + L Q
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 550 HRNLVRLLGCCVEREENMLIY-EYMPNKSLDSFL 582
H ++VR E ++MLI EY SL +
Sbjct: 70 HSHVVRYFSAWAED-DHMLIQNEYCNGGSLADAI 102
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 7/58 (12%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
D G Q + G +++ E E K+D+F+ + ++
Sbjct: 177 DLGHVTRISSPQVE------EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE 228
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 4e-12
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN 552
++F+ LGQG FG V K + D + A+K++ + ++EVM++++L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63
Query: 553 LVRLLGCCVEREENMLIYEYMPNKS 577
+VR +ER + + KS
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKS 88
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 584 DFGLARIFGGNQDQAAT------------KRLVGTYGYMSPE-YAMEGRFSEKSDVFSFG 630
DFGLA+ + D +GT Y++ E G ++EK D++S G
Sbjct: 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLG 218
Query: 631 VLLLEIVSG 639
++ E++
Sbjct: 219 IIFFEMIYP 227
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 4e-12
Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 72/208 (34%)
Query: 491 ANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA------SGQGQEEFMNEVM 543
+ + + +LG G F V K + G E A K + K G +EE EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 544 VISNLQHRNLVRLLGC----------------------CVERE----------------- 564
++ + H N++ L ++E
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 565 ----------------ENMLIYEYMPNKSLDSF---LFDFGLARIFGGNQDQAATKRLVG 605
EN+++ +K++ L DFGLA K + G
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLL----DKNIPIPHIKLIDFGLAHEIEDGV---EFKNIFG 180
Query: 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLL 633
T +++PE ++D++S GV+
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVIT 208
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 4e-12
Identities = 43/199 (21%), Positives = 76/199 (38%), Gaps = 57/199 (28%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFM----NEVMVISNLQHR 551
+++ +KLG GG VY + ++A+K + + +EE + EV S L H+
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAI-FIPPREKEETLKRFEREVHNSSQLSHQ 71
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFL----------------------------- 582
N+V ++ E + L+ EY+ +L ++
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR 131
Query: 583 ---------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
FDFG+A+ T ++GT Y SPE A
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS-LTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 622 EKSDVFSFGVLLLEIVSGR 640
E +D++S G++L E++ G
Sbjct: 191 ECTDIYSIGIVLYEMLVGE 209
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 8e-12
Identities = 39/218 (17%), Positives = 73/218 (33%), Gaps = 59/218 (27%)
Query: 470 STEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLS 528
++ A L + ++ F++ ++LG+G VY+ K + A+K L
Sbjct: 28 ASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK 87
Query: 529 KASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP-------------- 574
K ++ E+ V+ L H N+++L E L+ E +
Sbjct: 88 KT--VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYY 145
Query: 575 -------------------------------------NKSLDSFL--FDFGLARIFGGNQ 595
+ D+ L DFGL++I
Sbjct: 146 SERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205
Query: 596 DQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLL 633
K + GT GY +PE + + D++S G++
Sbjct: 206 ---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 240
|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 2e-11
Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 24/135 (17%)
Query: 15 YSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANK 74
+S + +++ + I+ ++ D N + Y+
Sbjct: 5 FSKQPDDNHPQILHATESL----EILFGTHVYRF-IMQTDCNL------VLYDNN----- 48
Query: 75 TVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGN 134
+W N + + DG LVV+ + W S V+ + L N
Sbjct: 49 NPIWATNTGGL--GNGCRAVLQPDGVLVVITNENVTVWQSPVAG--KAGHYVLVLQPDRN 104
Query: 135 LVLHDNISQVSIWDS 149
+V++ + ++W +
Sbjct: 105 VVIYGD----ALWAT 115
|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 2e-11
Identities = 22/125 (17%), Positives = 39/125 (31%), Gaps = 22/125 (17%)
Query: 25 DTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNK 84
+ + S Q + S+ + N + Y G +W +N ++
Sbjct: 3 NVLLSGQTLHADHSLQAGAYTLT---IQNKCNL------VKYQNG-----RQIWASNTDR 48
Query: 85 PLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQV 144
S T+ DGNLV+ + W S +N L G V++
Sbjct: 49 R--GSGCRLTLLSDGNLVIYDHNNNDVWGSACWG--DNGKYALVLQKDGRFVIYGP---- 100
Query: 145 SIWDS 149
+W
Sbjct: 101 VLWSL 105
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 41/200 (20%), Positives = 63/200 (31%), Gaps = 73/200 (36%)
Query: 503 LGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLG-- 558
LG+G V L QE AVK + K G + EV ++ Q HRN++ L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 559 -----------CCV---------------ERE---------------------------E 565
E E E
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPE 140
Query: 566 NMLIYEYMPNKSLDSFL--FDFGLARIF--GGNQDQAATKRL---VGTYGYMSPE----- 613
N+L + + S + DF L G+ +T L G+ YM+PE
Sbjct: 141 NILCE----HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 614 YAMEGRFSEKSDVFSFGVLL 633
+ ++ D++S GV+L
Sbjct: 197 SEEASIYDKRCDLWSLGVIL 216
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 3e-11
Identities = 52/213 (24%), Positives = 77/213 (36%), Gaps = 60/213 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEE-FMNEVMVISNLQH 550
+F++ LG+G FG VY + Q +A+K L KA G E EV + S+L+H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFL-----FD--------------------- 584
N++RL G + LI EY P ++ L FD
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 585 ------------------------FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
FG + ++ L GT Y+ PE
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMH 184
Query: 621 SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELT 653
EK D++S GVL E + G+ F ++ T
Sbjct: 185 DEKVDLWSLGVLCYEFLVGK--PPFEANTYQET 215
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 3e-11
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEF---MNEVMVISNLQHRN 552
F ++G G FG VY + +++ + +A+K++S + Q E++ + EV + L+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLD 579
++ GC + L+ EY + D
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASD 142
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 6e-11
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
DFGLARI + A T VGT YMSPE ++EKSD++S G LL E+ +
Sbjct: 159 DFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 20/93 (21%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHR 551
++++ +G G +G K + DG+ + K + ++ ++EV ++ L+H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 552 NLVRLLGCCVEREENML--IYEYMPNKSLDSFL 582
N+VR ++R L + EY L S +
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI 98
|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 7e-11
Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 22/125 (17%)
Query: 25 DTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNK 84
+ + S + + E + + ++ D N + Y+ +W N
Sbjct: 2 NILYSGETLSPGEFLNNG--RYVFIMQE-DCNL------VLYDVD-----KPIWATNTGG 47
Query: 85 PLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQV 144
D ++ DGNLVV + + W+SN N N L N+V++
Sbjct: 48 L--DRRCHLSMQSDGNLVVYSPRNNPIWASNTGG--ENGNYVCVLQKDRNVVIYGT---- 99
Query: 145 SIWDS 149
+ W +
Sbjct: 100 ARWAT 104
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 1e-10
Identities = 35/196 (17%), Positives = 59/196 (30%), Gaps = 62/196 (31%)
Query: 494 TNNFQLANKLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN 552
T+ +++ +G G + + E AVK + K+ EE E++ + QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE--IEIL-LRYGQHPN 77
Query: 553 LVRLLG-------------CCV---------------ERE-------------------- 564
++ L ERE
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 565 -------ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
N+L + N + DFG A+ T T +++PE
Sbjct: 138 VHRDLKPSNILYVDESGNPESIR-ICDFGFAKQLRAENGLLMT--PCYTANFVAPEVLER 194
Query: 618 GRFSEKSDVFSFGVLL 633
+ D++S GVLL
Sbjct: 195 QGYDAACDIWSLGVLL 210
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 2e-10
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE-FMNEVMVISNLQ 549
+ + + L++ LGQG V++G+ + G A+K + S + M E V+ L
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65
Query: 550 HRNLVRLLGCCVEREENMLIY---EYMPNKSLDSFLFDFGLARIF 591
H+N+V+L E E+ P SL + L + A
Sbjct: 66 HKNIVKLFA-IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL 109
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 9e-06
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPE--------YAM 616
N++ +S+ L DFG AR ++ Q + L GT Y+ P+
Sbjct: 141 GNIMRVIGEDGQSVYK-LTDFGAARELEDDE-QFVS--LYGTEEYLHPDMYERAVLRKDH 196
Query: 617 EGRFSEKSDVFSFGVLLLEIVSGR 640
+ ++ D++S GV +G
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGS 220
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 36/203 (17%), Positives = 69/203 (33%), Gaps = 64/203 (31%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS--GQGQEE-FMNEVMVISNLQHR 551
+ LG+GGF ++ + A K + K+ Q E E+ + +L H+
Sbjct: 42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 101
Query: 552 NLVRLLGCCVEREENM-LIYEYMPNKSL-------------------------------- 578
++V G E + + ++ E +SL
Sbjct: 102 HVVGFHG-FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 160
Query: 579 -----D----SFLFD---------FGLARIFGGNQDQAATKRLV---GTYGYMSPEYAME 617
D + + FGLA + + +R GT Y++PE +
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSK 215
Query: 618 GRFSEKSDVFSFGVLLLEIVSGR 640
S + DV+S G ++ ++ G+
Sbjct: 216 KGHSFEVDVWSIGCIMYTLLVGK 238
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 39/238 (16%), Positives = 80/238 (33%), Gaps = 64/238 (26%)
Query: 475 NPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRL-SKASG 532
+ + L + N+ + ++G G G V+K + + G IAVK++ +
Sbjct: 5 SSGKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK 64
Query: 533 QGQEEFMNEVMVI-SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF---------- 581
+ + + ++ V+ + +V+ G + + + E M +
Sbjct: 65 EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPE 123
Query: 582 ------------------------------------------LFDFGLARIFGGNQDQAA 599
L DFG++ G D A
Sbjct: 124 RILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGIS---GRLVDDKA 180
Query: 600 TKRLVGTYGYMSPE-----YAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFEL 652
R G YM+PE + + ++DV+S G+ L+E+ +G+ +FE+
Sbjct: 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV 238
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 3e-10
Identities = 36/203 (17%), Positives = 69/203 (33%), Gaps = 64/203 (31%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS--GQGQEE-FMNEVMVISNLQHR 551
+ LG+GGF ++ + A K + K+ Q E E+ + +L H+
Sbjct: 16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 75
Query: 552 NLVRLLGCCVEREENM-LIYEYMPNKSL-------------------------------- 578
++V G E + + ++ E +SL
Sbjct: 76 HVVGFHG-FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 134
Query: 579 -----D----SFLFD---------FGLARIFGGNQDQAATKRLV---GTYGYMSPEYAME 617
D + + FGLA + + +R GT Y++PE +
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSK 189
Query: 618 GRFSEKSDVFSFGVLLLEIVSGR 640
S + DV+S G ++ ++ G+
Sbjct: 190 KGHSFEVDVWSIGCIMYTLLVGK 212
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 3e-10
Identities = 31/216 (14%), Positives = 66/216 (30%), Gaps = 69/216 (31%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQG-------- 534
+ ++ + + +G+G V + G E AVK + + +
Sbjct: 83 LPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEV 142
Query: 535 QEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYEYMPN------------------ 575
+E E ++ + H +++ L+ L+++ M
Sbjct: 143 REATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKET 202
Query: 576 ----KSLDS-------------------FLF---------DFGLARIFGGNQDQAATKRL 603
+SL L DFG + + + L
Sbjct: 203 RSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE---KLREL 259
Query: 604 VGTYGYMSPE------YAMEGRFSEKSDVFSFGVLL 633
GT GY++PE + ++ D+++ GV+L
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 3e-10
Identities = 32/207 (15%), Positives = 64/207 (30%), Gaps = 70/207 (33%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQG---------QEEFMNEVM 543
N++ LG+G V + +E AVK + G +E + EV
Sbjct: 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 544 VISNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSL------------------------ 578
++ + H N+++L L+++ M L
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 135
Query: 579 -----------------DSFLF---------DFGLARIFGGNQDQAATKRLVGTYGYMSP 612
++ L DFG + + + + GT Y++P
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAP 192
Query: 613 E------YAMEGRFSEKSDVFSFGVLL 633
E + ++ D++S GV++
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIM 219
|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 | Back alignment and structure |
|---|
Score = 56.9 bits (137), Expect = 3e-10
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 20/126 (15%)
Query: 24 TDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRN 83
+D + S + S+ + + D N + Y+ VW + N
Sbjct: 1 SDRLNSGHQLDTGGSLAEG--GYLFIIQN-DCNL------VLYDNN-----RAVWASGTN 46
Query: 84 KPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQ 143
S + + DGNLV+ +G + + W+SN + N N L N+V++DN S
Sbjct: 47 GK--ASGCVLKMQNDGNLVIYSGSRAI-WASNTNR--QNGNYYLILQRDRNVVIYDN-SN 100
Query: 144 VSIWDS 149
+IW +
Sbjct: 101 NAIWAT 106
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 4e-10
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE-FMNEVMVISNLQ 549
+ + + L++ LGQG V++G+ + G A+K + S + M E V+ L
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65
Query: 550 HRNLVRLLGCCVEREENMLIY---EYMPNKSLDSFLFDFGLARIF 591
H+N+V+L E E+ P SL + L + A
Sbjct: 66 HKNIVKLF-AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL 109
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 1e-05
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPE--------YAM 616
N++ +S+ L DFG AR ++ Q + L GT Y+ P+
Sbjct: 141 GNIMRVIGEDGQSVYK-LTDFGAARELEDDE-QFVS--LYGTEEYLHPDMYERAVLRKDH 196
Query: 617 EGRFSEKSDVFSFGVLLLEIVSGR 640
+ ++ D++S GV +G
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGS 220
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 5e-10
Identities = 44/206 (21%), Positives = 73/206 (35%), Gaps = 61/206 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRL-SKASGQGQEEFMNEVMVI-SNLQHR 551
+ + ++G+G +G V K GQ +AVKR+ S + Q++ + ++ V+ +
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG-----------LARI---------- 590
+V+ G + + E M + S D F L +I
Sbjct: 82 YIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 591 -----------------------------FG--GN-QDQAATKRLVGTYGYMSPE----Y 614
FG G D A R G YM+PE
Sbjct: 141 LKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPS 200
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVSGR 640
A + +SDV+S G+ L E+ +GR
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGR 226
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 5e-10
Identities = 15/121 (12%), Positives = 39/121 (32%), Gaps = 11/121 (9%)
Query: 464 EAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGK------LQ 517
+Y N + ++ E + + + LG+G F VY+ +
Sbjct: 39 SSYPNTFEWQCKLPAIK-----PKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAK 93
Query: 518 DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKS 577
+ Q+ +K A+ + + ++ + + ++L+ E +
Sbjct: 94 NKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGT 153
Query: 578 L 578
L
Sbjct: 154 L 154
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 45.0 bits (106), Expect = 6e-05
Identities = 11/97 (11%), Positives = 27/97 (27%), Gaps = 15/97 (15%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSF------LFDFGLARIFGGNQDQAATKRL 603
H ++ + +N ++ + + L D G +
Sbjct: 195 HGDI---------KPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK 245
Query: 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
T G+ E ++ + D F + ++ G
Sbjct: 246 CETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGT 282
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 6e-10
Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQ-EEFMNEVMVISNLQ 549
++++L +G G V +++A+KR++ Q +E + E+ +S
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSL 578
H N+V V ++E L+ + + S+
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSV 100
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 7e-10
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 475 NPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQ 533
+ + + L + L + F+L +G G +G VYKG+ ++ GQ A+K + +G
Sbjct: 4 SDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM-DVTGD 62
Query: 534 GQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENM------LIYEYMPNKSL 578
+EE E+ ++ HRN+ G +++ L+ E+ S+
Sbjct: 63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSV 114
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 8e-10
Identities = 38/202 (18%), Positives = 69/202 (34%), Gaps = 63/202 (31%)
Query: 492 NATNNFQLANK-LGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISN 547
N N + L +K LG+G F V + GQE A K L K + E ++E+ V+
Sbjct: 25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLEL 84
Query: 548 LQHR-NLVRLLGC----------------------CVEREENML-----------IYE-- 571
+ ++ L C+ M+ I E
Sbjct: 85 AKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGV 144
Query: 572 -YM-----------P------NKSLDSFL--FDFGLARIFGGNQDQAATKRLVGTYGYMS 611
Y+ P + + DFG++R G + ++GT Y++
Sbjct: 145 YYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC---ELREIMGTPEYLA 201
Query: 612 PEYAMEGRFSEKSDVFSFGVLL 633
PE + +D+++ G++
Sbjct: 202 PEILNYDPITTATDMWNIGIIA 223
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 8e-10
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQD-QAATKRLVGTYGYMSPEY---AMEGRF 620
N+LI + + + + DFGL + + + + GT G+++PE +
Sbjct: 147 HNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENP 206
Query: 621 SEKSDVFSFGVLLLEIVSG 639
+ D+FS G + ++S
Sbjct: 207 TYTVDIFSAGCVFYYVISE 225
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 6e-08
Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLV 554
+F + LG G G + + D +++AVKR+ EV ++ +H N++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVI 81
Query: 555 RLLGCCVEREENM--LIYEYMP 574
R C E++ + E
Sbjct: 82 RYF--CTEKDRQFQYIAIELCA 101
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 9e-10
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
Query: 584 DFGLARIFGGNQDQAATK----------RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLL 633
DFGL ++++ VGT YMSPE +S K D+FS G++L
Sbjct: 207 DFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLIL 266
Query: 634 LE 635
E
Sbjct: 267 FE 268
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLS-KASGQGQEEFMNEVMVISNLQHRN 552
+F+ +G+GGFG V++ K D A+KR+ +E+ M EV ++ L+H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSF 581
+VR +E E D
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDES 94
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 9e-10
Identities = 42/205 (20%), Positives = 73/205 (35%), Gaps = 60/205 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRL-SKASGQGQEEFMNEVMVI-SNLQHR 551
++ + +LG+G +G V K + + GQ +AVKR+ + + Q Q+ + ++ + +
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG----------LARI----------- 590
V G + + E M + SLD F L +I
Sbjct: 67 FTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 125
Query: 591 ----------------------------FG--GN-QDQAATKRLVGTYGYMSPE----YA 615
FG G D A G YM+PE
Sbjct: 126 HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPEL 185
Query: 616 MEGRFSEKSDVFSFGVLLLEIVSGR 640
+ +S KSD++S G+ ++E+ R
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILR 210
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 1e-09
Identities = 37/191 (19%), Positives = 60/191 (31%), Gaps = 68/191 (35%)
Query: 502 KLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLG- 558
LG+G F K + Q AVK +SK + E+ + + H N+V+L
Sbjct: 18 PLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEV 74
Query: 559 ------------CCV---------------ERE--------------------------- 564
E E
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKP 134
Query: 565 ENMLIYEYMPNKSLDSFL--FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
EN+L +++ + + DFG AR+ + T T Y +PE + + E
Sbjct: 135 ENLLFT----DENDNLEIKIIDFGFARLKPPDNQPLKTP--CFTLHYAAPELLNQNGYDE 188
Query: 623 KSDVFSFGVLL 633
D++S GV+L
Sbjct: 189 SCDLWSLGVIL 199
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 1e-09
Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 478 RLQDLLVFNFEELANATNNFQLANKLGQG--GFGPVYKGK-LQDGQEIAVKR--LSKASG 532
+++L ++L +G+G V + G+ + V+R L S
Sbjct: 8 HMENLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN 67
Query: 533 QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL 578
+ E+ V H N+V + E ++ +M S
Sbjct: 68 EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSA 113
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE-FMNEVM 543
N + F KLG G FG V+ + G E +K ++K Q E E+
Sbjct: 13 NLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIE 72
Query: 544 VISNLQHRNLVRLLGCCVEREENMLIYEYM 573
V+ +L H N++++ + ++ E
Sbjct: 73 VLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 565 ENMLIYEYMPNKSLDSFL--FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
EN+L + S S + DFGLA +F ++ GT YM+PE + +
Sbjct: 153 ENILFQ----DTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPE-VFKRDVTF 204
Query: 623 KSDVFSFGVLL 633
K D++S GV++
Sbjct: 205 KCDIWSAGVVM 215
|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 2e-09
Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 23/130 (17%)
Query: 20 TATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWV 79
+ + S Q + + + + + D N + Y W
Sbjct: 2 IPFTNNLLFSGQVLYGDGRLTAKNHQLVMQG---DCNL------VLYGG------KYGWQ 46
Query: 80 ANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHD 139
+N + ++ G L++ + + WSS SS L D G V++
Sbjct: 47 SNTHGN--GEHCFLRLNHKGELIIKDDDFKTIWSSRSSS--KQGEYVLILQDDGFGVIYG 102
Query: 140 NISQVSIWDS 149
+I+++
Sbjct: 103 P----AIFET 108
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 2e-09
Identities = 47/214 (21%), Positives = 77/214 (35%), Gaps = 66/214 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKA---SGQGQEEFMNEVMV---ISN 547
N+F + +G+GGFG VY + D ++ A+K L K QG+ +NE ++ +S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 548 LQHRNLVRLLGCCVEREENM-LIYEYMP-------------------------------- 574
+V + + + I + M
Sbjct: 249 GDCPFIVCM-SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 575 --------------NKSLDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM 616
N LD + D GLA F + VGT+GYM+PE
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQ 363
Query: 617 EGRFSEKS-DVFSFGVLLLEIVSGRKNTSFYHEE 649
+G + S D FS G +L +++ G + F +
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGH--SPFRQHK 395
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 3e-09
Identities = 46/209 (22%), Positives = 74/209 (35%), Gaps = 52/209 (24%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEE-FMNEVMVISNLQH 550
++F + LG+G FG VY + Q+ +A+K L K+ +G E E+ + S+L+H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFL-----FDFGLARIF-------------- 591
N++R+ +R+ L+ E+ P L L FD + F
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 592 ----------------GGN-----------QDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
G + + GT Y+ PE EK
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKV 193
Query: 625 DVFSFGVLLLEIVSGRKNTSFYHEEFELT 653
D++ GVL E + G F T
Sbjct: 194 DLWCAGVLCYEFLVGM--PPFDSPSHTET 220
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 3e-09
Identities = 48/240 (20%), Positives = 79/240 (32%), Gaps = 61/240 (25%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKAS--GQGQEEF-MNEVMVISNLQH 550
+F+ LG+G F V + A+K L K + + + E V+S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFL-----FD--------------------- 584
V+L + E+ Y N L ++ FD
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 585 ------------------------FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
FG A++ QA VGT Y+SPE E
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 209
Query: 621 SEKSDVFSFGVLLLEIVSGRKNTSFYHEE----FELTLLG-YAWKLWNDNNVIDLVDPLI 675
+ SD+++ G ++ ++V+G F F+ + Y + DLV+ L+
Sbjct: 210 CKSSDLWALGCIIYQLVAGL--PPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 267
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 3e-09
Identities = 49/222 (22%), Positives = 76/222 (34%), Gaps = 65/222 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKA---SGQGQEEFMNEVMVISNLQH 550
N F+ LG+GGFG V +++ ++ A K+L K +G+ +NE ++ +
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 551 RNLVRLLGCCVEREENMLIYEYMP------------------------------------ 574
R +V L ++ L+ M
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 575 ------------NKSLDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
N LD + D GLA Q K VGT GYM+PE
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNE 360
Query: 619 RFSEKSDVFSFGVLLLEIVSG------RKNTSFYHEEFELTL 654
R++ D ++ G LL E+++G RK E L
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 4e-09
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
DFG+A + VGT YM+PE E + ++D+++ +L E ++G
Sbjct: 177 DFGIASATTDEK-LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS 232
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 4e-09
Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 56/154 (36%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMN-----EVMVISNL 548
++ + LG+G F VYK + Q +A+K++ ++ +N E+ ++ L
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 549 QHRNLVRLLGCCVEREENMLIYEYM----------PNKSLD-----SFLF---------- 583
H N++ LL + L++++M + L +++
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 584 -------------------------DFGLARIFG 592
DFGLA+ FG
Sbjct: 130 QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 5e-09
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 584 DFGLAR-IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
DFG+AR I T ++GT Y+SPE A +SDV+S G +L E+++G
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 6e-09
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 491 ANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ 549
+ + L N +G+G +G V A K++ K + + F E+ ++ +L
Sbjct: 5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 550 HRNLVRLLGCCVEREENMLIYEYM 573
H N++RL + + L+ E
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELC 88
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 6e-06
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 565 ENMLIYEYMPNKSLDSFL--FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
EN L S DS L DFGLA F + + VGT Y+SP+ +EG +
Sbjct: 135 ENFLFL----TDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQ-VLEGLYGP 186
Query: 623 KSDVFSFGVLL 633
+ D +S GV++
Sbjct: 187 ECDEWSAGVMM 197
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 8e-09
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 59/201 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEF----MNEVMVISNLQH 550
+Q K+G+G +G VYK K G+ +A+KR+ E + E+ ++ L H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR--LDAEDEGIPSTAIREISLLKELHH 78
Query: 551 RNLVRLLGCCVEREENMLIYEYMPN---KSLD------------SFLF------------ 583
N+V L+ L++E+M K LD +L+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
DFGLAR F G ++ T +V T Y +P+ M +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKK 196
Query: 621 -SEKSDVFSFGVLLLEIVSGR 640
S D++S G + E+++G+
Sbjct: 197 YSTSVDIWSIGCIFAEMITGK 217
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 1e-08
Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 14/158 (8%)
Query: 480 QDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVK-----RLSKASGQ 533
++ L F L + L +GQG +G V Q A+K ++ + + +
Sbjct: 11 RENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPK 70
Query: 534 GQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSL--------DSFLFDF 585
E EV ++ L H N+ RL + + L+ E L D
Sbjct: 71 DVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKC 130
Query: 586 GLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEK 623
+ + +++ EK
Sbjct: 131 AMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREK 168
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 584 DFGLARIFGGNQ--DQAATKRLVGTYGYMSPE--YAMEGRFSEKSDVFSFGVLLLEIVSG 639
DFGL++ F + GT +++PE + K D +S GVLL ++ G
Sbjct: 213 DFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
Query: 640 R 640
Sbjct: 273 A 273
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 1e-08
Identities = 43/203 (21%), Positives = 78/203 (38%), Gaps = 60/203 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEF----MNEVMVISNLQ 549
++ K+G+G +G V+K K + + +A+KR+ E + E+ ++ L+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR--LDDDDEGVPSSALREICLLKELK 59
Query: 550 HRNLVRLLGCCVEREENMLIYEYM----------PNKSLD-----SFLF----------- 583
H+N+VRL ++ L++E+ N LD SFLF
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 584 ------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR 619
+FGLAR F G + + +V T Y P+ +
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVV-TLWYRPPDVLFGAK 177
Query: 620 F-SEKSDVFSFGVLLLEIVSGRK 641
S D++S G + E+ + +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGR 200
|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 1e-08
Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 25/127 (19%)
Query: 23 ATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANR 82
T+ + S Q + + + + D N Y G W + + +
Sbjct: 2 GTNYLLSGQTLDTEGHLKNGDFDLVMQ---DDCNLV-LYNGNWQSNTANNGRDCK----- 52
Query: 83 NKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNIS 142
T+++ G LV+ NG W S S N A + G LV+
Sbjct: 53 ----------LTLTDYGELVIKNGDGSTVWKSGAQS--VKGNYAAVVHPDGRLVVFGP-- 98
Query: 143 QVSIWDS 149
S++
Sbjct: 99 --SVFKI 103
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 1e-08
Identities = 44/201 (21%), Positives = 79/201 (39%), Gaps = 59/201 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEF----MNEVMVISNLQH 550
+ K+G+G +G VYK + G+ A+K++ + E + E+ ++ L+H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR--LEKEDEGIPSTTIREISILKELKH 59
Query: 551 RNLVRLLGCCVEREENMLIYEYM----------PNKSLD-----SFLF------------ 583
N+V+L ++ +L++E++ L+ SFL
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 584 -----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
DFGLAR F G + T +V T Y +P+ M +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-TLWYRAPDVLMGSKK 177
Query: 621 -SEKSDVFSFGVLLLEIVSGR 640
S D++S G + E+V+G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGT 198
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 1e-08
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS--GQGQEE-FMNEVMVISNLQH 550
+F++ N LG+G F VY+ + + G E+A+K + K + G + NEV + L+H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 551 RNLVRLLGCCVEREENM-LIYEYMPNKSL 578
+++ L E + L+ E N +
Sbjct: 71 PSILELYN-YFEDSNYVYLVLEMCHNGEM 98
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 57.0 bits (137), Expect = 1e-08
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 10/96 (10%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE-FMNEVMVISNLQHRNL 553
+++ +LG GGFG V + G+++A+K+ + E + E+ ++ L H N+
Sbjct: 15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 554 VRLLGCCVEREENM-------LIYEYMPNKSLDSFL 582
V + + + L EY L +L
Sbjct: 75 VSAR-EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL 109
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 52.8 bits (126), Expect = 3e-07
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
EN+++ + D G A+ + VGT Y++PE + +++
Sbjct: 150 ENIVLQPGPQRLIHK--IIDLGYAKELDQGE-LCTE--FVGTLQYLAPELLEQKKYTVTV 204
Query: 625 DVFSFGVLLLEIVSGR 640
D +SFG L E ++G
Sbjct: 205 DYWSFGTLAFECITGF 220
|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 2e-08
Identities = 16/127 (12%), Positives = 37/127 (29%), Gaps = 20/127 (15%)
Query: 23 ATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANR 82
+ + SSQ + D + + D N + +VW +
Sbjct: 5 VRNVLFSSQVMYDNAQLATRDYSLV---MRDDCNL------VLTKGS---KTNIVWESGT 52
Query: 83 NKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNIS 142
+ + G L + + + + SN + L +G V++
Sbjct: 53 SGR--GQHCFMRLGHSGELDITDDRLNTVFVSNTVG--QEGDYVLILQINGQAVVYGP-- 106
Query: 143 QVSIWDS 149
++W +
Sbjct: 107 --AVWST 111
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 2e-08
Identities = 40/215 (18%), Positives = 76/215 (35%), Gaps = 74/215 (34%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVK--RLSKASGQGQEEF----MNEVMVISN 547
+ ++ K+GQG FG V+K + + GQ++A+K + +E F + E+ ++
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE----KEGFPITALREIKILQL 72
Query: 548 LQHRNLVRLLGCCVEREENM--------LIYEYM----------PNKSLD-----SFLF- 583
L+H N+V L+ C + L++++ +
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 132
Query: 584 ----------------------------------DFGLARIFGGNQDQAA---TKRLVGT 606
DFGLAR F ++ T R+V T
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVV-T 191
Query: 607 YGYMSPEYAM-EGRFSEKSDVFSFGVLLLEIVSGR 640
Y PE + E + D++ G ++ E+ +
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS 226
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 2e-08
Identities = 32/193 (16%), Positives = 63/193 (32%), Gaps = 69/193 (35%)
Query: 502 KLGQGGFGPVYKG-KLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLG- 558
LG G G V + + ++ A+K L + EV + ++VR++
Sbjct: 69 VLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDV 123
Query: 559 ----------------CCV-----------------EREENMLIY------EYM------ 573
C ERE + ++ +Y+
Sbjct: 124 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 183
Query: 574 -----P------NKSLDSFL--FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
P +K ++ L DFG A+ + + T Y++PE ++
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKY 240
Query: 621 SEKSDVFSFGVLL 633
+ D++S GV++
Sbjct: 241 DKSCDMWSLGVIM 253
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 3e-08
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMN-----EVMVI 545
++++ F+ KLG G + VYKG G +A+K + EE E+ ++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK----LDSEEGTPSTAIREISLM 57
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYM 573
L+H N+VRL + L++E+M
Sbjct: 58 KELKHENIVRLYDVIHTENKLTLVFEFM 85
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 3e-08
Identities = 42/203 (20%), Positives = 71/203 (34%), Gaps = 63/203 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMN-----EVMVISNL 548
+ +KLG+G + VYKGK +A+K + EE EV ++ +L
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIR----LEHEEGAPCTAIREVSLLKDL 57
Query: 549 QHRNLVRLLGCCVEREENMLIYEYM----------PNKSLD-----SFLF---------- 583
+H N+V L + L++EY+ ++ FLF
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH 117
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR + +V T Y P+ +
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLARAK-SIPTKTYDNEVV-TLWYRPPDILLGS 175
Query: 619 R-FSEKSDVFSFGVLLLEIVSGR 640
+S + D++ G + E+ +GR
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGR 198
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 4e-08
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNL 553
++ L +GGF VY+ + + G+E A+KRL + + EV + L H N+
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 554 VRLLGCCVEREENM 567
V+ +E
Sbjct: 89 VQFCSAASIGKEES 102
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 5e-04
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 18/89 (20%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRL----------VGTYGYMSPE- 613
EN+L+ K L DFG A D + + + T Y +PE
Sbjct: 167 ENLLLSNQGTIK-----LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEI 221
Query: 614 YAMEGRF--SEKSDVFSFGVLLLEIVSGR 640
+ F EK D+++ G +L + +
Sbjct: 222 IDLYSNFPIGEKQDIWALGCILYLLCFRQ 250
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 7e-08
Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 475 NPARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG 534
+P ++ +L + + + +G G FG V++ KL + E+A+K++ +
Sbjct: 20 DPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ----- 74
Query: 535 QEEFMN-EVMVISNLQHRNLVRLLGCCVEREENM------LIYEYMP 574
+ F N E+ ++ ++H N+V L + L+ EY+P
Sbjct: 75 DKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 7e-08
Identities = 45/212 (21%), Positives = 66/212 (31%), Gaps = 76/212 (35%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMN------EVMVISNL 548
+Q+ LG GGFG VY G + D +A+K + K E N EV+++ +
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 549 QHR--NLVRLL-----------------------------GCCVERE------------- 564
++RLL G E
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 163
Query: 565 --------------ENMLIYEYMPN-KSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
EN+LI K L DFG + GT Y
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRGELK-----LIDFGSGALLKDT----VYTDFDGTRVY 214
Query: 610 MSPEYAMEGRFS-EKSDVFSFGVLLLEIVSGR 640
PE+ R+ + V+S G+LL ++V G
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 246
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 8e-08
Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 53/151 (35%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMN--EVMVISNLQHR 551
++ K+G+G +G V+K + GQ +A+K+ ++ + + E+ ++ L+H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 552 NLVRLLGCCVEREENMLIYEYMP----------NKSLD-----SFLF------------- 583
NLV LL + L++EY + + S +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 584 ----------------------DFGLARIFG 592
DFG AR+
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLT 153
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 9e-08
Identities = 44/214 (20%), Positives = 67/214 (31%), Gaps = 78/214 (36%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMN------EV----MV 544
++L LG+GGFG V+ G L D ++A+K + + G + EV V
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 545 ISNLQHRNLVRLL-----------------------------GCCVERE----------- 564
+ H ++RLL G E
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 565 ----------------ENMLIYEYMPN-KSLDSFLFDFGLARIFGGNQDQAATKRLVGTY 607
EN+LI K L DFG + GT
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAK-----LIDFGSGALLHDE----PYTDFDGTR 202
Query: 608 GYMSPEYAMEGRFS-EKSDVFSFGVLLLEIVSGR 640
Y PE+ ++ + V+S G+LL ++V G
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 9e-08
Identities = 47/206 (22%), Positives = 75/206 (36%), Gaps = 64/206 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEF----MNEVMVISNLQ 549
+ ++ KLG+G +G VYK + +A+KR+ +E + EV ++ LQ
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR--LEHEEEGVPGTAIREVSLLKELQ 91
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPN---KSLD-----------SFLF------------ 583
HRN++ L LI+EY N K +D SFL+
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 584 ----------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYA 615
DFGLAR F G + T ++ T Y PE
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQFTHEII-TLWYRPPEIL 209
Query: 616 M-EGRFSEKSDVFSFGVLLLEIVSGR 640
+ +S D++S + E++
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKT 235
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 9e-08
Identities = 41/204 (20%), Positives = 72/204 (35%), Gaps = 64/204 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVK--RLSKASGQGQEEF----MNEVMVISN 547
++ +G+G +G V K + G+ +A+K S + M E+ ++
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD----DKMVKKIAMREIKLLKQ 80
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYM----------PNKSLD-----SFLF--------- 583
L+H NLV LL C +++ L++E++ LD +LF
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 584 --------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
DFG AR + + T Y +PE +
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA-PGEVYDDEVA-TRWYRAPELLVG 198
Query: 618 GRFSEKS-DVFSFGVLLLEIVSGR 640
K+ DV++ G L+ E+ G
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMGE 222
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 1e-07
Identities = 20/180 (11%), Positives = 50/180 (27%), Gaps = 49/180 (27%)
Query: 497 FQLANKLGQGGFGPVYKGKLQD---GQEIAVKRL---SKASGQGQEEFMNEVMVISNLQH 550
++L G ++ D +++A+ + +E ++ + +S +
Sbjct: 33 YRLLIFHGGVPPLQFWQAL--DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDK 90
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGL-----ARIFGG------------ 593
+ R+L R +++ E++ SL D R
Sbjct: 91 PGVARVLDVVHTRAGGLVVAEWIRGGSLQEVA-DTSPSPVGAIRAMQSLAAAADAAHRAG 149
Query: 594 -------------NQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
+ D ++ M + + D+ G L ++ R
Sbjct: 150 VALSIDHPSRVRVSIDGDV---VLAYPATMPDA-------NPQDDIRGIGASLYALLVNR 199
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 1e-07
Identities = 44/213 (20%), Positives = 78/213 (36%), Gaps = 68/213 (31%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLS-KASGQGQEEF----MNEVMVIS 546
AT+ ++ ++G G +G VYK + G +A+K + G G + EV ++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 547 NLQ---HRNLVRLLGCCVEREEN-----MLIYEYM-----------PNKSLD-----SFL 582
L+ H N+VRL+ C + L++E++ P L +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 583 F-----------------------------------DFGLARIFGGNQDQAATKRLVGTY 607
DFGLARI+ A T +V T
Sbjct: 127 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALTPVVV-TL 183
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
Y +PE ++ ++ D++S G + E+ +
Sbjct: 184 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 4e-07
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 494 TNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQHR 551
++ +G G FG VY+ KL D G+ +A+K++ + + F N E+ ++ L H
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHC 107
Query: 552 NLVRLLGCCVEREENM------LIYEYMP 574
N+VRL E L+ +Y+P
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP 136
|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 | Back alignment and structure |
|---|
Score = 51.2 bits (121), Expect = 4e-07
Identities = 37/257 (14%), Positives = 73/257 (28%), Gaps = 36/257 (14%)
Query: 20 TATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFT--NRYIGIWYNKGGSANKTVV 77
T + + Q + + ++S +FKL DGN + +W
Sbjct: 10 NGVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQ-GDGNLVIQDNGATVWVA--NEQQPFSS 66
Query: 78 WVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNS---NTRAQLLDSGN 134
+ RNK + + ++ W ++ S+ +N T L D GN
Sbjct: 67 TIPLRNKK-----APLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGN 121
Query: 135 LVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSL-SNPSIGSFSAGL 193
+VL D+++ + + S + L L G+ ++ L
Sbjct: 122 IVLVDSLALWNGTPAIPLVPGAIDSLL-------------LAPGSELVQGVVYGAGASKL 168
Query: 194 DSFTIPEVFIWINGTRPYWRSGPW--NGRYFIGIPDMNSVYLDGFNLGEDHQKGTRYLTF 251
+ + W +G + D N V N + +
Sbjct: 169 VFQGDGNLVAYGPNGAATWNAGTQGKGAVRAVFQGDGNLVVYGAGN-------AVLWHSH 221
Query: 252 AFADNDVFFALTPQGNL 268
L G++
Sbjct: 222 TGGHASAVLRLQANGSI 238
|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 | Back alignment and structure |
|---|
Score = 48.1 bits (113), Expect = 5e-06
Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 9/115 (7%)
Query: 36 PESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTI 95
+++ GS+ G G + G N W A +
Sbjct: 145 DSLLLAPGSELVQGVVYGAGASKLVFQGDGNLVAYGPNGAATWNAGTQGK---GAVRAVF 201
Query: 96 SEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSF 150
DGNLVV V W S+ +++ +L +G++ + D +W F
Sbjct: 202 QGDGNLVVYGAGNAVLWHSHTG---GHASAVLRLQANGSIAILDE---KPVWARF 250
|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 | Back alignment and structure |
|---|
Score = 43.1 bits (100), Expect = 2e-04
Identities = 23/150 (15%), Positives = 38/150 (25%), Gaps = 15/150 (10%)
Query: 11 SSCFYSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFF-SPDGNFTNRYIGIWYN-- 67
+ + A D ++ D + S+ + DGN +N
Sbjct: 75 APLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVDSLALWNGT 134
Query: 68 --------KGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSL 119
S + + DGNLV W++
Sbjct: 135 PAIPLVPGAIDSLLLAPGSELVQGVVYGAGASKLVFQGDGNLVAYGPNGAATWNAGTQ-- 192
Query: 120 ANNSNTRAQLLDSGNLVLHDNISQVSIWDS 149
RA GNLV++ +W S
Sbjct: 193 -GKGAVRAVFQGDGNLVVYGA-GNAVLWHS 220
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 7e-07
Identities = 42/203 (20%), Positives = 72/203 (35%), Gaps = 58/203 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKA---SGQGQEEFMNEVMVISNLQH 550
+ F LG+GGFG V+ +++ ++ A K+L+K +G + M E +++ +
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 551 RNLVRLLGCCVEREENM-LIYEYMP---------NKSLDSFLFDFGLARI---------- 590
R +V L E + ++ L+ M N D+ F A
Sbjct: 245 RFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 591 -----------------------------FG----GNQDQAATKRLVGTYGYMSPEYAME 617
G Q TK GT G+M+PE +
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 618 GRFSEKSDVFSFGVLLLEIVSGR 640
+ D F+ GV L E+++ R
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAAR 386
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 51.2 bits (122), Expect = 7e-07
Identities = 11/86 (12%), Positives = 23/86 (26%), Gaps = 21/86 (24%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEY---------- 614
++++ + FL F G A+ G+ PE
Sbjct: 240 VDIVL---DQRGGV--FLTGFEHLVRDG------ASAVSPIGRGFAPPETTAERMLPFGQ 288
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVSGR 640
+ D ++ G+ + I
Sbjct: 289 HHPTLMTFAFDTWTLGLAIYWIWCAD 314
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 7e-07
Identities = 46/215 (21%), Positives = 77/215 (35%), Gaps = 65/215 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQGQEE---FMNEVMVISNLQH 550
+F++ +G+G FG V KL++ ++ A+K L+K + E F E V+ N
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 551 RNLVRLLGCCVEREENM-LIYEYMP----------------------------------- 574
+ + L + + N+ L+ +Y
Sbjct: 134 KWITTLH-YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192
Query: 575 ------------NKSLDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPE----- 613
N +D L DFG + + VGT Y+SPE
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAM 251
Query: 614 YAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHE 648
+GR+ + D +S GV + E++ G T FY E
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGE--TPFYAE 284
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 50.8 bits (121), Expect = 8e-07
Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 12/78 (15%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM--EGRFSE 622
+N+ I MP+ L L D G Y E+ F+
Sbjct: 223 DNLFI---MPDGRL--MLGDVSALWKVG-----TRGPASSVPVTYAPREFLNASTATFTH 272
Query: 623 KSDVFSFGVLLLEIVSGR 640
+ + G+ + +
Sbjct: 273 ALNAWQLGLSIYRVWCLF 290
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 50.4 bits (120), Expect = 1e-06
Identities = 15/116 (12%), Positives = 31/116 (26%), Gaps = 4/116 (3%)
Query: 449 KAMKENSKVQRLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLGQGGF 508
K +E R + + A Q+ L+ +L L G
Sbjct: 16 KREEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDR 75
Query: 509 GPVYKGK-LQDGQEIAVKRLSK---ASGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
V+ + ++ ++ A+K + S E + L +
Sbjct: 76 SVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRR 131
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 9e-07
Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 10/99 (10%)
Query: 477 ARLQDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQE 536
+R+ ++ NFE+ + N LG G G V G+ +AVKR+ +
Sbjct: 1 SRIANIP--NFEQ--SLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CD 53
Query: 537 EFMNEVMV-ISNLQHRNLVRLLGCCVEREENM-LIYEYM 573
+ E+ + + H N++R C + + + E
Sbjct: 54 IALMEIKLLTESDDHPNVIRYY-CSETTDRFLYIALELC 91
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 2e-06
Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 26/138 (18%)
Query: 565 ENMLIYEYMPNKSLDSFLF--------DFGLARIFGGNQD--QAATKRLVGTYGYMSPE- 613
+N+L+ + DFGL + Q + GT G+ +PE
Sbjct: 144 QNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPEL 203
Query: 614 ------YAMEGRFSEKSDVFSFGVLLLEIVSG---------RKNTSFYHEEFELTLLGYA 658
+ R + D+FS G + I+S + ++ F L +
Sbjct: 204 LEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCL 263
Query: 659 WKLWNDNNVIDLVDPLIS 676
DL+ +I
Sbjct: 264 HDRSLIAEATDLISQMID 281
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 502 KLGQGGFGPVYKGKLQD---GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLG 558
K+G+G +G VYK K +D ++ A+K++ + +G E+ ++ L+H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQI-EGTGISMSA-CREIALLRELKHPNVISLQK 85
Query: 559 CCVEREEN--MLIYEYM 573
+ + L+++Y
Sbjct: 86 VFLSHADRKVWLLFDYA 102
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 2e-06
Identities = 14/90 (15%), Positives = 36/90 (40%), Gaps = 10/90 (11%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE--------FMNEVMV 544
+ + ++ LG G G V + +++A++ +SK E+ +
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMP 574
+ L H ++++ + E+ ++ E M
Sbjct: 194 LKKLNHPCIIKIKN-FFDAEDYYIVLELME 222
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 3e-05
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPE---YAMEGRFS 621
EN+L+ + + + DFG ++I G + + + L GT Y++PE ++
Sbjct: 268 ENVLLSSQEEDCLIK--ITDFGHSKILG---ETSLMRTLCGTPTYLAPEVLVSVGTAGYN 322
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL 655
D +S GV+L +SG F +++L
Sbjct: 323 RAVDCWSLGVILFICLSGY--PPFSEHRTQVSLK 354
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 3e-06
Identities = 49/290 (16%), Positives = 97/290 (33%), Gaps = 84/290 (28%)
Query: 445 FAKRKAMKENSKVQRLDLGEAYANFSTEKVNPARLQDLLVFNFEELANATNNFQLANKLG 504
++++++KE + D + + S + F LG
Sbjct: 9 GSEQESVKEFLAKAKEDFLKKWETPSQNTAQL------------------DQFDRIKTLG 50
Query: 505 QGGFGPVYKGKLQDGQEI-AVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560
G FG V K ++ A+K L K + E +NE ++ + LV+L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 561 VEREENMLIYEYMP---------------------------------------------- 574
+ ++ EY+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 575 NKSLDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFG 630
N +D + DFG A+ G T L GT ++PE + +++ D ++ G
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALG 225
Query: 631 VLLLEIVSGRKNTSFYHEE----FELTLLG-YAWKLWNDNNVIDLVDPLI 675
VL+ E+ +G F+ ++ +E + G + +++ DL+ L+
Sbjct: 226 VLIYEMAAGY--PPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 3e-06
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 18/109 (16%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFM--------------- 539
N++++ L QG F + + +D + A+K+ K+ + + +F
Sbjct: 31 NDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89
Query: 540 --NEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG 586
NE+ +I+++++ + G +E +IYEYM N S+ F F
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFF 138
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 44/205 (21%), Positives = 74/205 (36%), Gaps = 69/205 (33%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRN 552
N++L +G+G F V + + G+E+A+K + K + ++ EV ++ L H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 553 LVRLL----------------------------GCCVERE-------------------- 564
+V+L G E+E
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 135
Query: 565 -------ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
EN+L+ M K + DFG + F G Y +PE +
Sbjct: 136 VHRDLKAENLLLDADMNIK-----IADFGFSNEF---TVGGKLDAFCGAPPYAAPE-LFQ 186
Query: 618 GRFSE--KSDVFSFGVLLLEIVSGR 640
G+ + + DV+S GV+L +VSG
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGS 211
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 4e-06
Identities = 15/90 (16%), Positives = 36/90 (40%), Gaps = 10/90 (11%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE--------FMNEVMV 544
+ + ++ LG G G V + +++A+K +SK E+ +
Sbjct: 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMP 574
+ L H ++++ + E+ ++ E M
Sbjct: 69 LKKLNHPCIIKIKN-FFDAEDYYIVLELME 97
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 3e-05
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPE---YAMEGRFS 621
EN+L+ + + + DFG ++I G + + + L GT Y++PE ++
Sbjct: 143 ENVLLSSQEEDCLIK--ITDFGHSKILG---ETSLMRTLCGTPTYLAPEVLVSVGTAGYN 197
Query: 622 EKSDVFSFGVLL 633
D +S GV+L
Sbjct: 198 RAVDCWSLGVIL 209
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 4e-06
Identities = 43/213 (20%), Positives = 80/213 (37%), Gaps = 74/213 (34%)
Query: 495 NNFQLANKLGQGGFGPVYKGK--LQDGQEIAVK--RLSKASGQGQEEF----MNEVMVIS 546
++ ++G+G +G V+K + G+ +A+K R+ G+E + EV V+
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV----QTGEEGMPLSTIREVAVLR 66
Query: 547 NLQ---HRNLVRLLGCCVEREEN-----MLIYEYM-----------PNKSLD-----SFL 582
+L+ H N+VRL C + L++E++ P + +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 583 F-----------------------------------DFGLARIFGGNQDQAATKRLVGTY 607
F DFGLARI+ A T +V T
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS--FQMALTSVVV-TL 183
Query: 608 GYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
Y +PE ++ ++ D++S G + E+ +
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 4e-06
Identities = 43/217 (19%), Positives = 73/217 (33%), Gaps = 67/217 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQGQEE---FMNEVMVISNLQH 550
++F++ +G+G F V K++ ++ A+K ++K + E F E V+ N
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 551 RNLVRLLGCCVEREENM-LIYEYMP----------------------------------- 574
R + +L + E + L+ EY
Sbjct: 121 RWITQLH-FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 575 ------------NKSLDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPE----- 613
N LD L DFG + + VGT Y+SPE
Sbjct: 180 RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAV 238
Query: 614 --YAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHE 648
G + + D ++ GV E+ G+ T FY +
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYEMFYGQ--TPFYAD 273
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 6e-06
Identities = 43/211 (20%), Positives = 73/211 (34%), Gaps = 60/211 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQGQEE---FMNEVMVISNLQH 550
++++ +G+G FG V + + +++ A+K LSK + + F E +++
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 551 RNLVRLLGCCVEREENMLIYEYMP------------------------------------ 574
+V+L + ++ EYMP
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 188
Query: 575 ---------NKSLDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPE----YAME 617
N LD L DFG VGT Y+SPE +
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE-GMVRCDTAVGTPDYISPEVLKSQGGD 247
Query: 618 GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHE 648
G + + D +S GV L E++ G T FY +
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGD--TPFYAD 276
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 47.7 bits (113), Expect = 9e-06
Identities = 11/87 (12%), Positives = 24/87 (27%), Gaps = 22/87 (25%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEY---------- 614
++++ + FL F G A + G+ PE
Sbjct: 235 VDIVL---DQRGGV--FLTGFEHLVRDG------ARVVSSVSRGFEPPELEARRATISYH 283
Query: 615 -AMEGRFSEKSDVFSFGVLLLEIVSGR 640
+ D ++ G+++ I
Sbjct: 284 RDRRTLMTFSFDAWALGLVIYWIWCAD 310
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 9e-06
Identities = 13/77 (16%), Positives = 24/77 (31%), Gaps = 8/77 (10%)
Query: 73 NKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDS 132
VW N + +G + VL + W+S S + L
Sbjct: 167 RDDRVWSTNTAGKGTGCRAVLQ--PNGRMDVLTNQNIAVWTSGNSR--SAGRYVFVLQPD 222
Query: 133 GNLVLHDNISQVSIWDS 149
NL ++ ++W +
Sbjct: 223 RNLAIYGG----ALWTT 235
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 | Back alignment and structure |
|---|
Score = 45.3 bits (106), Expect = 3e-05
Identities = 34/172 (19%), Positives = 57/172 (33%), Gaps = 7/172 (4%)
Query: 64 IWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNS 123
I + G S + + + L SS FT+ D NLV+ + W+SN + +
Sbjct: 3 ILF--GLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDSDV-RVWASNTA---GAT 56
Query: 124 NTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSN 183
RA L G LV+ + + W S + + Y + T L + +
Sbjct: 57 GCRAVLQSDGLLVILTAQNTI-RWSSGTKGSIGNYVLVLQPDRTVTIYGPGLWDSGTSNK 115
Query: 184 PSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDG 235
S+ + G + T +S + D N V D
Sbjct: 116 GSVVVANNGNSILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR 167
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 47/206 (22%), Positives = 70/206 (33%), Gaps = 62/206 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVK-------------------RLSKASG-- 532
N ++L K+G G FG +Y G + G+E+A+K + G
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIP 68
Query: 533 ----QGQEEFMNEVMVIS----------NLQHRNL----VRLLGC-CVEREENM----LI 569
G E N VMV+ N R V LL + R E + I
Sbjct: 69 TIRWCGAEGDYN-VMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 127
Query: 570 YEYM---------PNKSLDSFLFDFGLARIFGGNQDQA-----ATKRLVGTYGYMSPEYA 615
+ + K ++ DFGLA+ + + K L GT Y S
Sbjct: 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI-NT 186
Query: 616 MEGRF-SEKSDVFSFGVLLLEIVSGR 640
G S + D+ S G +L+ G
Sbjct: 187 HLGIEQSRRDDLESLGYVLMYFNLGS 212
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 40/204 (19%), Positives = 76/204 (37%), Gaps = 62/204 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKASGQGQEEF---MNEVMVISNLQH 550
++F++ +G+G FG V + D +++ A+K ++K + E E+ ++ L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 551 RNLVRLLGCCVEREENM-LIYEYMP----------------------------------- 574
LV L + EE+M ++ + +
Sbjct: 75 PFLVNLW-YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN 133
Query: 575 -----------NKSLDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPE--YAME 617
N LD + DF +A + + + GT YM+PE + +
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIAAML---PRETQITTMAGTKPYMAPEMFSSRK 190
Query: 618 GRFSEKS-DVFSFGVLLLEIVSGR 640
G + D +S GV E++ GR
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGR 214
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 46.5 bits (110), Expect = 3e-05
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
N F+L K+G G FG +Y G +Q +E+A+K + + Q + E + LQ
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY--ESKIYRILQGGTG 64
Query: 554 V-RLLGCCVEREENMLIYEYMPNKSLDSFLFDF 585
+ + VE + N+L+ + + SL+ LF+F
Sbjct: 65 IPNVRWFGVEGDYNVLVMDLL-GPSLED-LFNF 95
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 42/203 (20%), Positives = 68/203 (33%), Gaps = 63/203 (31%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE-FMNEVMVISNLQHRNL 553
++ L LG+G +G V + +AVK + E E+ + L H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 554 VRLLGCCVEREENMLIYEYMP--------------------------------------- 574
V+ G E L EY
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 575 -------NKSLDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPE------YAME 617
N LD + DFGLA +F N + ++ GT Y++PE +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-- 185
Query: 618 GRFSEKSDVFSFGVLLLEIVSGR 640
+E DV+S G++L +++G
Sbjct: 186 ---AEPVDVWSCGIVLTAMLAGE 205
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 41/208 (19%), Positives = 75/208 (36%), Gaps = 64/208 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQ-------------------- 533
++++ ++G+G FG +++G L + Q++A+K + S
Sbjct: 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIP 69
Query: 534 -----GQEEFMNEVMVIS----------NLQHRNL----VRLLG----CCVE-------- 562
GQE N V+VI +L R V + V+
Sbjct: 70 NVYYFGQEGLHN-VLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLV 128
Query: 563 -RE---ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQA-----ATKRLVGTYGYMSPE 613
R+ +N LI + ++ DFG+ + + + K L GT YMS
Sbjct: 129 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI- 187
Query: 614 YAMEGRF-SEKSDVFSFGVLLLEIVSGR 640
GR S + D+ + G + + + G
Sbjct: 188 NTHLGREQSRRDDLEALGHVFMYFLRGS 215
|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 5e-05
Identities = 16/125 (12%), Positives = 36/125 (28%), Gaps = 22/125 (17%)
Query: 26 TITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKP 85
+ + I + + F + D N + YN+ + +N +
Sbjct: 4 VLLTGDVIHTDNQLSYESAAFVMQG---DCNL------VLYNEA------GGFQSNTHGR 48
Query: 86 LIDSSGIFTISEDGNLVVLNGK-KQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQV 144
++ G L + + W S N A L ++ ++
Sbjct: 49 --GVDCTLRLNNRGQLEIHSANSNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYGP---- 102
Query: 145 SIWDS 149
+IW +
Sbjct: 103 AIWST 107
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 8e-05
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 565 ENMLIYEYMPNKSLDSFL--FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
EN+L +K D+ L DFG A+ N + T Y++PE ++ +
Sbjct: 157 ENLL----YTSKEKDAVLKLTDFGFAKETTQNA----LQTPCYTPYYVAPEVLGPEKYDK 208
Query: 623 KSDVFSFGVLL 633
D++S GV++
Sbjct: 209 SCDMWSLGVIM 219
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 1e-04
Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 23/114 (20%)
Query: 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRL--------SKASGQGQ 535
F T Q K+G+G FG V++ D +A+K + + + +
Sbjct: 10 PVPFSHCL-PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTF 67
Query: 536 EEFMNEVMVISNLQ---------HRNLVRLLGCCVER----EENMLIYEYMPNK 576
EE + E+++ L + L + + +++ +
Sbjct: 68 EEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNST 121
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 34/204 (16%), Positives = 76/204 (37%), Gaps = 61/204 (29%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ- 549
+++QL KLG+G + V++ + + +++ VK L +++ E+ ++ NL+
Sbjct: 33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRG 89
Query: 550 HRNLVRLLGCCVEREENM---LIYEYMPNKSLDSF------------------------- 581
N++ L V+ + L++E++ N
Sbjct: 90 GPNIITLA-DIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS 148
Query: 582 -----------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
L D+GLA + Q R V + + PE ++
Sbjct: 149 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVR-VASRYFKGPELLVDY 205
Query: 619 RFSEKS-DVFSFGVLLLEIVSGRK 641
+ + S D++S G +L ++ ++
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKE 229
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 2e-04
Identities = 45/208 (21%), Positives = 78/208 (37%), Gaps = 61/208 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEI-AVKRLSKAS--GQGQEE-FMNEVMVISNLQH 550
+FQ+ LG G FG V+ + + A+K L K Q E +E +++S + H
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 65
Query: 551 RNLVRLLGCCVEREENMLIYEYMP------------------------------------ 574
++R+ G + ++ +I +Y+
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 125
Query: 575 ----------NKSLDSF----LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
N LD + DFG A+ T L GT Y++PE +
Sbjct: 126 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPY 180
Query: 621 SEKSDVFSFGVLLLEIVSGRKNTSFYHE 648
++ D +SFG+L+ E+++G T FY
Sbjct: 181 NKSIDWWSFGILIYEMLAGY--TPFYDS 206
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH-RN 552
NF++ K+G G FG + GK L + +A+K S Q E L
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ--LHLEYRFYKQLGSGDG 66
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLFDF 585
+ ++ + N ++ E + SL+ LFD
Sbjct: 67 IPQVYYFGPCGKYNAMVLELL-GPSLED-LFDL 97
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 38/221 (17%), Positives = 71/221 (32%), Gaps = 70/221 (31%)
Query: 487 FEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEE--FMN---- 540
EL + + + + G +G V G +G +A+KR+ G+ +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 541 -----EVMVISNLQHRNLVRLLGC-CVEREENM----LIYEYM----------PNKSLD- 579
E+ ++++ H N++ L E M L+ E M +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 580 ----SFLF-----------------------------------DFGLARIFGGNQDQAAT 600
F++ DF LAR D T
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKT 191
Query: 601 KRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGR 640
V Y +PE M+ F++ D++S G ++ E+ + +
Sbjct: 192 HY-VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 3e-04
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
E + FQ+ GQG FG V GK + G +A+K++ + E +
Sbjct: 14 ADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQ-IMQD 72
Query: 545 ISNLQHRNLVRLLGC-CVEREENM------LIYEYMP 574
++ L H N+V+L E + ++ EY+P
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP 109
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 3e-04
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS----GQGQEEFMNEVMVISNLQH 550
+ + + LG+G +G V + + AVK L K G+ E+ ++ L+H
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65
Query: 551 RNLVRLLGCCVEREENM--LIYEYMPNKSLDSFLFDF 585
+N+++L+ E+ ++ EY + + D
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDS 100
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 4e-04
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--------SGQGQEEFMNEVMVIS 546
+ + LG G FG V+ + +E+ VK + K + E+ ++S
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 547 NLQHRNLVRLL 557
++H N++++L
Sbjct: 85 RVEHANIIKVL 95
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 4e-04
Identities = 14/95 (14%), Positives = 41/95 (43%), Gaps = 22/95 (23%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMN---------EVM 543
+ +++ + +G G +G V + + + +A+K++ + F + E+
Sbjct: 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-------FEDLIDCKRILREIA 104
Query: 544 VISNLQHRNLVRLLG-CCVEREENM----LIYEYM 573
+++ L H ++V++L + E ++ E
Sbjct: 105 ILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA 139
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 9e-04
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMN-EVMVISNLQ 549
++ + L LG G FG V + + G+ A+K++ + + N E+ ++ L
Sbjct: 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQ-----DPRYKNRELDIMKVLD 58
Query: 550 HRNLVRLLGC 559
H N+++L+
Sbjct: 59 HVNIIKLVDY 68
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 760 | |||
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 99.98 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.97 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 99.97 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 99.97 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 99.97 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.96 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.96 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.96 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.96 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.96 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.96 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.96 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 99.96 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.96 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.96 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.96 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.95 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.95 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.95 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.95 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.95 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.95 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.95 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.95 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.95 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.95 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.95 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.95 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.95 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.95 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.95 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.95 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.95 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.95 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.95 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.95 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.95 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.95 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.95 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.95 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.95 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.95 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.95 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.95 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.95 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.95 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.95 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.95 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.95 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.95 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.95 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.95 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.95 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.94 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.94 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.94 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.94 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.94 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.94 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.94 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.94 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.94 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.94 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.94 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.94 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.94 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.94 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.94 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.94 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.94 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.94 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.94 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.94 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.94 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.94 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.94 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.94 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.94 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.94 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.94 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.94 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.94 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.94 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.94 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.94 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.94 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.94 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.94 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.94 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.94 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.94 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.94 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.94 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.94 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.94 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.94 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.94 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.94 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.94 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.94 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.94 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.94 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.94 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.94 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.94 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.94 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.94 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.94 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.94 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.94 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.94 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.94 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.94 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.94 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.94 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.94 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.94 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.94 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.94 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.94 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.93 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.93 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.93 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.93 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.93 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.93 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.93 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.93 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.93 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.93 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.93 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.93 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.93 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.93 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.93 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.93 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.93 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.93 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.93 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.93 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.93 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.93 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.93 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.93 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.93 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.93 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.93 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.93 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.93 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.93 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.93 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.93 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.93 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.93 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.93 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.93 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.93 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.93 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.93 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.93 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.93 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.93 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.93 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.93 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.93 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.93 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.93 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.93 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.93 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.93 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.93 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.93 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.93 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.93 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.93 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.93 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.93 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.93 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.93 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.93 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.93 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.93 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.92 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.92 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.92 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.92 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.92 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.92 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.92 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.92 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.92 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.92 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.92 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.92 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.92 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.92 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.92 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.92 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.92 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.92 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.92 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.92 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.92 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.92 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.92 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.92 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.92 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.92 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.92 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.92 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.92 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.92 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.91 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.91 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.91 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.91 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.91 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.91 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.91 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.91 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.91 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.91 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.9 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.9 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.9 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.9 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.9 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.9 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.9 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.89 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.89 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.89 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.85 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.84 | |
| 4h3o_A | 105 | Lectin; cadmium, plant protein; 2.17A {Allium sati | 99.83 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 99.82 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 99.81 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.8 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 99.78 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 99.76 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 99.71 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.65 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 99.64 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 99.63 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 99.57 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.57 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 99.5 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 99.49 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.48 | |
| 3mez_A | 111 | Mannose-specific lectin 3 chain 1; heterotetramer, | 99.47 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.45 | |
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 99.22 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 99.18 | |
| 3mez_A | 111 | Mannose-specific lectin 3 chain 1; heterotetramer, | 99.17 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.06 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 98.98 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 98.97 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 98.87 | |
| 4h3o_A | 105 | Lectin; cadmium, plant protein; 2.17A {Allium sati | 98.62 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 98.57 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 97.93 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 97.86 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.32 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 96.82 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 96.63 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 93.58 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 92.69 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 90.17 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 89.61 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 86.54 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 85.14 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 85.06 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 83.31 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 82.14 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 81.4 |
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=360.83 Aligned_cols=225 Identities=16% Similarity=0.201 Sum_probs=172.2
Q ss_pred cccccccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCC----CcEEEE
Q 004345 20 TATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDS----SGIFTI 95 (760)
Q Consensus 20 ~~~~~dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~----~~~l~l 95 (760)
++++.|+|++|++|+++++|+|++|+|+||||.++ ++|| |+ +.+ +||+|||++|+.++ +++|+|
T Consensus 10 ~~~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~----~~~l---y~----~~~-vvW~Anr~~p~~~~~~~~~~~l~l 77 (276)
T 3m7h_A 10 NGVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG----NLVI---QD----NGA-TVWVANEQQPFSSTIPLRNKKAPL 77 (276)
T ss_dssp CCTTSSEECTTEEBCTTCEEECTTSSEEEEECTTS----CEEE---EE----TTE-EEEECSTTSTTEEEEECCCTTCCS
T ss_pred ccccCCEecCCCEecCCCEEEcCCCcEEEEEECCC----CeEE---EC----CCC-eEEECCCCCCcCCcccccceEEEE
Confidence 35677999999999999999999999999999432 5677 76 456 99999999999875 789999
Q ss_pred ecCccEEE--EcCCCCEEEecCCCCCc---CCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCcccccccCC
Q 004345 96 SEDGNLVV--LNGKKQVHWSSNVSSLA---NNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTG 170 (760)
Q Consensus 96 ~~~G~L~l--~d~~~~~vWst~~~~~~---~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~~~g 170 (760)
+.||+|+| .|+++.+||+|+++... ..+++.|+|+|+|||||+| +.+|||| ||||||||||+++.++++|
T Consensus 78 ~~~G~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~---~~~lWqS--~ptdtlLpg~~~~~~l~~g 152 (276)
T 3m7h_A 78 AFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD---SLALWNG--TPAIPLVPGAIDSLLLAPG 152 (276)
T ss_dssp EEEESSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE---EEEEEES--CTTSCCCCSCTTCEEECSS
T ss_pred eCCCcEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC---CceeeCc--ccccccccccccccccccC
Confidence 99999999 78889999999975421 0135789999999999998 5689999 9999999999999999888
Q ss_pred ccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCCCCCceeeecccccccccceeeeeeeCcCCeEEEE
Q 004345 171 KKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDHQKGTRYLT 250 (760)
Q Consensus 171 ~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (760)
++ | ++..||++|.|++.|++++. ++++.++..+||++|+|++...... +.. ...+.+.+ .+....+.+
T Consensus 153 ~~--L---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~yW~Sgt~~~~~~~l~--l~~--dGnLvl~d-~~~~~vWsS 220 (276)
T 3m7h_A 153 SE--L---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAATWNAGTQGKGAVRAV--FQG--DGNLVVYG-AGNAVLWHS 220 (276)
T ss_dssp EE--E---CTTCEEEETTEEEEECTTSC--EEEECTTSSEEEECCCTTTTCCEEE--ECT--TSCEEEEC-TTSCEEEEC
T ss_pred cc--c---ccCCCCCCceEEEeecCCce--EEEEeCCCeEEEECCCCCCccEEEE--EcC--CCeEEEEe-CCCcEEEEe
Confidence 65 6 57889999999999999885 4445345689999999976432111 111 11222222 112233333
Q ss_pred EEEeCCceEEEEccCCcEEEEEe
Q 004345 251 FAFADNDVFFALTPQGNLEERAW 273 (760)
Q Consensus 251 ~~~~~~~~~~~l~~~G~l~~~~~ 273 (760)
+.......+++|+.||+|++|.|
T Consensus 221 ~t~~~~~~rl~Ld~dGnLvly~~ 243 (276)
T 3m7h_A 221 HTGGHASAVLRLQANGSIAILDE 243 (276)
T ss_dssp SCTTCTTCEEEECTTSCEEEEEE
T ss_pred cCCCCCCEEEEEcCCccEEEEcC
Confidence 22222334599999999999998
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=344.42 Aligned_cols=207 Identities=27% Similarity=0.434 Sum_probs=156.8
Q ss_pred cccccccccccCCceeEEEEEec------CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++|.+.++||+|+||.||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 56778899999999999999864 478899999987766677889999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh-----------------------------------------------------------------c
Q 004345 569 IYEYMPNKSLDSFL-----------------------------------------------------------------F 583 (760)
Q Consensus 569 V~Ey~~~gsL~~~L-----------------------------------------------------------------~ 583 (760)
|||||++|+|.++| +
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEEC
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEc
Confidence 99999999997642 3
Q ss_pred cccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhc
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLW 662 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 662 (760)
|||+|+.+.............||+.|||||++....++.++|||||||+||||+| |+.||...... .+...+
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~---~~~~~i---- 273 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT---EAIDCI---- 273 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH---HHHHHH----
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH---HHHHHH----
Confidence 9999997754444444455789999999999999999999999999999999999 89998643221 111111
Q ss_pred cCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 663 NDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 663 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
..+...+ . +......+.+|+.+||+.||++||||.||+++|+.+.+
T Consensus 274 ~~g~~~~-----~----p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 274 TQGRELE-----R----PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHTCCCC-----C----CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HcCCCCC-----C----cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 1111111 1 11123467889999999999999999999999988754
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=342.03 Aligned_cols=207 Identities=29% Similarity=0.466 Sum_probs=164.3
Q ss_pred cccccccccccCCceeEEEEEec------CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++|.+.++||+|+||.||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 56888899999999999999863 477899999987666677889999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh---------------------------------------------------------------ccc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------------------FDF 585 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------------------~DF 585 (760)
|||||++|+|.++| +||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCc
Confidence 99999999998653 399
Q ss_pred cceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccC
Q 004345 586 GLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWND 664 (760)
Q Consensus 586 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 664 (760)
|+|+...............||+.|||||++....|+.|+|||||||+||||+| |+.||...... .+...+ ..
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~---~~~~~i----~~ 245 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN---EVIECI----TQ 245 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHHHH----HH
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHH----Hc
Confidence 99987654443334445679999999999999999999999999999999999 89998643221 111111 11
Q ss_pred CCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 665 NNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 665 ~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
+.... .+......+.+++.+||+.||++||||+||+++|+++.+
T Consensus 246 ~~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 246 GRVLQ---------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp TCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 11111 111223467889999999999999999999999988754
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-39 Score=339.55 Aligned_cols=205 Identities=30% Similarity=0.449 Sum_probs=161.7
Q ss_pred cccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
..+++.++||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34667799999999999999863 46789999997543 345678999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhh-----------------------------------------------------------------
Q 004345 568 LIYEYMPNKSLDSFL----------------------------------------------------------------- 582 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L----------------------------------------------------------------- 582 (760)
||||||++|+|.++|
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~K 185 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVK 185 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEE
Confidence 999999999998764
Q ss_pred -ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHH
Q 004345 583 -FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWK 660 (760)
Q Consensus 583 -~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 660 (760)
+|||+|+.+.............||++|||||++..+.|+.|+|||||||+||||+| |+.||...... .+...
T Consensus 186 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~---~~~~~--- 259 (308)
T 4gt4_A 186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---DVVEM--- 259 (308)
T ss_dssp ECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH---HHHHH---
T ss_pred ECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH---HHHHH---
Confidence 39999997654443444455789999999999999999999999999999999999 89998643221 12211
Q ss_pred hccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 661 LWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 661 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
...+.... .+......+.+++.+||+.||++||||.||+++|+..
T Consensus 260 -i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 -IRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp -HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred -HHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11222111 1112235678899999999999999999999999764
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=327.40 Aligned_cols=213 Identities=26% Similarity=0.411 Sum_probs=155.5
Q ss_pred hccccccccccccCCceeEEEEEecCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
..+++++.++||+|+||+||+|+++ ..||||+++.. ..+..++|.+|+.+|++++|||||+++|+|.+ +..+|||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 4467788899999999999999975 36999998743 23445789999999999999999999999865 5689999
Q ss_pred eccCCCChhhhh---------------------------------------------------ccccceeEecCCCcccc
Q 004345 571 EYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 571 Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||++|+|.++| +|||+|+..........
T Consensus 111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~ 190 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---------
T ss_pred EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCccee
Confidence 999999998874 39999987654333334
Q ss_pred cceeeeeccccCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 600 TKRLVGTYGYMSPEYAME---GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~---~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
....+||+.|||||++.. ++|+.|+|||||||+||||+||+.||....... .. ......+. ..|.+.
T Consensus 191 ~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~---~~---~~~~~~~~----~~p~~~ 260 (307)
T 3omv_A 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD---QI---IFMVGRGY----ASPDLS 260 (307)
T ss_dssp ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HH---HHHHHTTC----CCCCST
T ss_pred ecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH---HH---HHHHhcCC----CCCCcc
Confidence 455789999999999963 469999999999999999999999996432211 11 11111111 111111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCC
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDL 719 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~ 719 (760)
.........+.+++.+||+.||++||||.||+++|+.+...+
T Consensus 261 -~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 261 -KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 111122356778999999999999999999999998775444
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-37 Score=330.02 Aligned_cols=219 Identities=25% Similarity=0.378 Sum_probs=171.7
Q ss_pred ccCHHHHHHhccccccccccccCCceeEEEEEec------CCcEEEEEEecccCc-cchHhHHHHHHHHhcCCC-Cccce
Q 004345 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQH-RNLVR 555 (760)
Q Consensus 484 ~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H-~nIv~ 555 (760)
.++.++++...++|++.++||+|+||.||+|++. .++.||||+++.... ...++|.+|+++|.+++| ||||+
T Consensus 53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence 4667788888999999999999999999999854 246899999976433 345679999999999965 89999
Q ss_pred eeeEEEeC-CeeEEEEeccCCCChhhhh----------------------------------------------------
Q 004345 556 LLGCCVER-EENMLIYEYMPNKSLDSFL---------------------------------------------------- 582 (760)
Q Consensus 556 l~g~~~~~-~~~~lV~Ey~~~gsL~~~L---------------------------------------------------- 582 (760)
++|+|.+. +..+||||||++|+|.++|
T Consensus 133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK 212 (353)
T 4ase_A 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 212 (353)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccC
Confidence 99999765 5689999999999997653
Q ss_pred --------------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCc
Q 004345 583 --------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYH 647 (760)
Q Consensus 583 --------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~ 647 (760)
+|||+|+.+............+||+.|||||++.+..|+.|+|||||||+||||+| |+.||....
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 39999998765554445556789999999999999999999999999999999998 899986432
Q ss_pred ccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 648 EEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
... . +...+.++.... . +.....++.+++.+||+.||++||||.||++.|+++++
T Consensus 293 ~~~--~----~~~~i~~g~~~~-----~----p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 293 IDE--E----FCRRLKEGTRMR-----A----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp CSH--H----HHHHHHHTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH--H----HHHHHHcCCCCC-----C----CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 221 1 111111111111 1 11123467789999999999999999999999988753
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=314.80 Aligned_cols=201 Identities=20% Similarity=0.316 Sum_probs=160.6
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.+.|++.++||+|+||.||+|+.. +++.||||+++.......+.+.+|+.+|++++|||||++++++.+++..||||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 356999999999999999999964 7899999999876666677899999999999999999999999999999999999
Q ss_pred cCCCChhhhh-------------------------------------------------ccccceeEecCCCccccccee
Q 004345 573 MPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 573 ~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
|++|+|.++| +|||+|+.+.... ......
T Consensus 153 ~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~~~~ 230 (346)
T 4fih_A 153 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSL 230 (346)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CCBCCC
T ss_pred CCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC--Cccccc
Confidence 9999998863 4999999875332 233457
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
+||+.|||||++....|+.++|||||||++|||++|+.||...... .....+.. + ..+.+. .....
T Consensus 231 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~~i~~----~-----~~~~~~--~~~~~ 296 (346)
T 4fih_A 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAMKMIRD----N-----LPPRLK--NLHKV 296 (346)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHHHHH----S-----SCCCCS--CGGGS
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHHHHHHc----C-----CCCCCC--ccccC
Confidence 8999999999999999999999999999999999999999643221 11111111 1 001110 01111
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.+++.+||+.||++|||+.|+++
T Consensus 297 s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 297 SPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 245778889999999999999999976
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-35 Score=298.21 Aligned_cols=216 Identities=14% Similarity=0.221 Sum_probs=162.3
Q ss_pred cccccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccE
Q 004345 22 TATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNL 101 (760)
Q Consensus 22 ~~~dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L 101 (760)
++.|+|++|++|+++++| ++|.|+|||+.++ + +. +|.. +|+||+|||+.| .+++|+|+.||+|
T Consensus 6 ~~~~~i~~g~~L~~g~~l--~~g~f~l~f~~~g-n-----l~-ly~~-----~~~vW~an~~~~---~~~~l~l~~dGnL 68 (236)
T 1dlp_A 6 GLSHEGSHPQTLHAAQSL--ELSSFRFTMQSDC-N-----LV-LFDS-----DVRVWASNTAGA---TGCRAVLQSDGLL 68 (236)
T ss_dssp CSSSSSCSCSCCCTTCEE--CSTTEEEEECTTS-C-----EE-EEES-----SSEEECCCCCSC---SCCBCCBCSSSCB
T ss_pred eccceeCCCCEECCCCEE--EcCCEEEEECCCC-c-----EE-EEEC-----CEEEEECCCCCC---CCeEEEEcCCCcE
Confidence 556999999999999999 5999999998765 3 23 4432 599999999988 5689999999999
Q ss_pred EEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccc-cCCCcccccc-cCCc-----cEE
Q 004345 102 VVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTF-YSEMKVSTDL-RTGK-----KVQ 174 (760)
Q Consensus 102 ~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTl-Lpg~~l~~~~-~~g~-----~~~ 174 (760)
||.|++|.+||+|++.... ....|+|+|+|||||++. ++||||||||||+ ||+| +.+. .+|+ ++.
T Consensus 69 vl~d~~~~~vW~s~~~~~~--~~~~~~l~d~Gnlvl~~~----~~W~S~~~p~~t~~lp~~--g~d~L~~gq~~~~~~~~ 140 (236)
T 1dlp_A 69 VILTAQNTIRWSSGTKGSI--GNYVLVLQPDRTVTIYGP----GLWDSGTSNKGSVVVANN--GNSILYSTQGNDNHPQT 140 (236)
T ss_dssp CCBCTTTCCSCCCCCCCCS--SCCEEEECSSSCEEEECS----EEEECSCCCSSCCCCSSC--CCEECCCC--CCCCCCE
T ss_pred EEEcCCCcEEEeCCccccC--CcEEEEEeCCCCEEEecC----CEEECCCCCCcccccCCc--cceEEecCCcCCCccce
Confidence 9999999999999975432 346899999999999953 7999999999887 6665 5543 5555 567
Q ss_pred EEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCCCCCceeeecccccccccceeeeeeeCcCCeEEEEEEEe
Q 004345 175 LTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGRYFIGIPDMNSVYLDGFNLGEDHQKGTRYLTFAFA 254 (760)
Q Consensus 175 L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (760)
|+ +..||++|.|+|.+++++ +++++ ++..+||++++|++. +...+.+.... .+.. .+.+..+.+.++...
T Consensus 141 L~---s~~d~s~G~~~l~l~~dG--~LvL~-~~~~~~W~s~~~~~~-~~~~~~L~~~G--nl~l-y~~~~~~vw~s~~~~ 210 (236)
T 1dlp_A 141 LH---ATQSLQLSPYRLSMETDC--NLVLF-DRDDRVWSTNTAGKG-TGCRAVLQPNG--RMDV-LTNQNIAVWTSGNSR 210 (236)
T ss_dssp EC---SSCCCBCSSCEEEEETTT--EEEEE-BTTBCCSCCCCCSSC-SSCEEEEETTT--EEEE-EETTTEEEEECCCCC
T ss_pred EE---cCcEeecCcEEEEECCCC--cEEEE-cCCEeEEeCCCcCCC-CceEEEECCCC--cEEE-EeCCCcEEEEeCCCC
Confidence 87 478999999999999988 56666 666799999999653 44555543221 1111 122333444444433
Q ss_pred CC-ceEEEEccCCcEEEEE
Q 004345 255 DN-DVFFALTPQGNLEERA 272 (760)
Q Consensus 255 ~~-~~~~~l~~~G~l~~~~ 272 (760)
+. ..+++|++||++++|.
T Consensus 211 ~~~~~rl~Ld~dG~l~ly~ 229 (236)
T 1dlp_A 211 SAGRYVFVLQPDRNLAIYG 229 (236)
T ss_dssp SSSCCEEEECSSSCEEEEC
T ss_pred CCCCEEEEEcCCCcEEEeC
Confidence 32 3349999999999994
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-36 Score=320.19 Aligned_cols=198 Identities=22% Similarity=0.362 Sum_probs=151.7
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|++.++||+|+||.||+|+. .+++.||||+++.. .....+.|.+|+++|++|+|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 6899999999999999999995 47899999999754 23445689999999999999999999999999999999999
Q ss_pred ccCCCChhhhh----------------------------------------------------ccccceeEecCCCcccc
Q 004345 572 YMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 572 y~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
||++|+|.++| +|||+|+.+... ...
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~--~~~ 181 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST--VEL 181 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH--HHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCC--ccc
Confidence 99999998764 499999976422 122
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
....+||+.|||||++.+..|+.++|||||||+||||+||+.||...... ........ +... .+....
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~i~~-~~~~-----~~~~~~ 249 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK------NLVLKIIS-GSFP-----PVSLHY 249 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHH-TCCC-----CCCTTS
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHHc-CCCC-----CCCccC
Confidence 33468999999999999999999999999999999999999999643211 11111111 1110 111111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.+++.+||+.||++|||+.|+++
T Consensus 250 ----s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 250 ----SYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 245778889999999999999999986
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=313.21 Aligned_cols=214 Identities=20% Similarity=0.193 Sum_probs=161.7
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.+.|++.++||+|+||.||+|+. .+++.||||+++... .+.+|+.+|++++|||||++++++.+++..+|||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 45688889999999999999996 468999999996532 235799999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcc---c
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ---A 598 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~---~ 598 (760)
|++|+|.++| +|||+|+.+...... .
T Consensus 132 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence 9999998874 499999987543221 1
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
.....+||+.|||||++.+..|+.++|||||||+||||+||+.||....... +...+.. ...... .+
T Consensus 212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~~~~i~~---~~~~~~----~~--- 278 (336)
T 4g3f_A 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP---LCLKIAS---EPPPIR----EI--- 278 (336)
T ss_dssp --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC---CHHHHHH---SCCGGG----GS---
T ss_pred cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---HHHHHHc---CCCCch----hc---
Confidence 2234689999999999999999999999999999999999999996433221 1111111 100000 01
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCCCCCCCc
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPA 726 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~~p~~p~ 726 (760)
+......+.+++.+||+.||++|||+.|+++.|...+.+...-+.|-
T Consensus 279 -~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw 325 (336)
T 4g3f_A 279 -PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPW 325 (336)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCS
T ss_pred -CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCC
Confidence 11122457788899999999999999999999988766555444443
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=310.86 Aligned_cols=214 Identities=21% Similarity=0.303 Sum_probs=153.1
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHH--HHHHHHhcCCCCccceeeeEEEeCC----eeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFM--NEVMVISNLQHRNLVRLLGCCVERE----ENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~--~E~~~l~~l~H~nIv~l~g~~~~~~----~~~l 568 (760)
.+|.+.++||+|+||.||+|++ +|+.||||+++.. ..+.+. .|+..+.+++|||||+++|+|.+++ ..+|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 4578889999999999999998 5899999999643 233344 4566667899999999999998764 5799
Q ss_pred EEeccCCCChhhhh---------------------------------------------------------ccccceeEe
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------------~DFGla~~~ 591 (760)
|||||++|+|.++| +|||+|+..
T Consensus 79 V~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred EecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999998874 399999987
Q ss_pred cCCCcc--cccceeeeeccccCccccccC------CCCccchhHHHHHHHHHHHhCCCCCCCCcccccc--------cHH
Q 004345 592 GGNQDQ--AATKRLVGTYGYMSPEYAMEG------RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFEL--------TLL 655 (760)
Q Consensus 592 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~--------~~~ 655 (760)
...... ......+||+.|||||++.+. .++.|+|||||||+||||+||+.|+......... ...
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 544332 223346899999999999754 3678999999999999999998876532221100 001
Q ss_pred HHHHHhccCCCccccccccccCC-CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 656 GYAWKLWNDNNVIDLVDPLISES-GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 656 ~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
......... +.++|.+... ...+....+.+++.+||+.||++||||.||+++|+++.
T Consensus 239 ~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 239 EEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp HHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 111111111 1122222221 12345667889999999999999999999999998864
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=311.68 Aligned_cols=198 Identities=22% Similarity=0.287 Sum_probs=159.5
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.++||+|+||+||+|+. .+++.||||++++. .....+.+.+|+++|++++|||||++++++.+++..||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999995 57899999999753 2345678999999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|||++|+|.++| +|||+|+.+.........
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~ 191 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCB
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccc
Confidence 999999998874 499999988654444445
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...+||+.|||||++.+..|+.++||||+||+||||++|+.||...... .+...+ . .+.. .+....
T Consensus 192 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~~i---~-~~~~------~~p~~~- 257 (311)
T 4aw0_A 192 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG---LIFAKI---I-KLEY------DFPEKF- 257 (311)
T ss_dssp CCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH---H-HTCC------CCCTTC-
T ss_pred cCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH---H-cCCC------CCCccc-
Confidence 5679999999999999999999999999999999999999999633211 111111 1 1111 111111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVV 709 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~ 709 (760)
...+.+++.+||+.||++|||+.|++
T Consensus 258 ---s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 258 ---FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ---CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ---CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 23567888999999999999999864
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=316.02 Aligned_cols=201 Identities=20% Similarity=0.315 Sum_probs=160.7
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.+.|++.++||+|+||.||+|+. .+++.||||+++.......+.+.+|+.+|++++|||||++++++.+++..||||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 45799999999999999999996 46899999999876666677899999999999999999999999999999999999
Q ss_pred cCCCChhhhh-------------------------------------------------ccccceeEecCCCccccccee
Q 004345 573 MPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 573 ~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
|++|+|.++| +|||+|+.+.... ......
T Consensus 230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~~~~ 307 (423)
T 4fie_A 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSL 307 (423)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--CCBCCC
T ss_pred CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--cccccc
Confidence 9999998763 4999999875332 233457
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
+||+.|||||++....|+.++|||||||++|||++|+.||...... .....+.. + ..+.+.. ....
T Consensus 308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~~i~~----~-----~~~~~~~--~~~~ 373 (423)
T 4fie_A 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAMKMIRD----N-----LPPRLKN--LHKV 373 (423)
T ss_dssp EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHHHHH----S-----CCCCCSC--TTSS
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHHHHHHc----C-----CCCCCcc--cccC
Confidence 9999999999999999999999999999999999999999633221 11111111 1 0111111 0111
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.+++.+||+.||++|||+.|+++
T Consensus 374 s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 374 SPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 245678889999999999999999977
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=301.09 Aligned_cols=194 Identities=23% Similarity=0.381 Sum_probs=147.8
Q ss_pred ccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEe----CCeeEEEE
Q 004345 498 QLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE----REENMLIY 570 (760)
Q Consensus 498 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~----~~~~~lV~ 570 (760)
++.++||+|+||.||+|... +++.||||++... .....+.|.+|+++|++++|||||++++++.. ++..+|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56678999999999999964 6889999999754 23345679999999999999999999999875 34579999
Q ss_pred eccCCCChhhhh-----------------------------------------------------ccccceeEecCCCcc
Q 004345 571 EYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 571 Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
|||++|+|.++| +|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~---- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT----
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC----
Confidence 999999998874 49999985422
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......+||+.|||||++. +.|+.++|||||||+||||+||+.||...... .........+.... .+..
T Consensus 185 ~~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~------~~~~~~i~~~~~~~----~~~~ 253 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA------AQIYRRVTSGVKPA----SFDK 253 (290)
T ss_dssp TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH------HHHHHHHTTTCCCG----GGGG
T ss_pred CccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH------HHHHHHHHcCCCCC----CCCc
Confidence 2234578999999999886 46999999999999999999999999632211 11111111211111 1111
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.. ...+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~----~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 254 VA----IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CC----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 235678889999999999999999976
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=293.02 Aligned_cols=195 Identities=21% Similarity=0.315 Sum_probs=140.2
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+|+. .+++.||||++++.. ....+.+.+|+++|++++|||||++++++.+++..+|||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999995 478999999997542 334567999999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+ +|+|.++| +|||+|+...... ..
T Consensus 93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~---~~ 168 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FL 168 (275)
T ss_dssp ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC------------
T ss_pred eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC---cc
Confidence 999 67887763 4999998764322 23
Q ss_pred ceeeeeccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRF-SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
...+||+.|||||++.+..+ +.++||||+||++|||+||+.||...... .+.... ..+.. .+....
T Consensus 169 ~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~---~~~~~i----~~~~~------~~p~~~ 235 (275)
T 3hyh_A 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP---VLFKNI----SNGVY------TLPKFL 235 (275)
T ss_dssp ------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH----HHTCC------CCCTTS
T ss_pred CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH---HHHHHH----HcCCC------CCCCCC
Confidence 35689999999999998876 58999999999999999999999632211 111111 11110 111111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.+++.+||+.||++|||+.|+++
T Consensus 236 ----s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 236 ----SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ----CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ----CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 245678889999999999999999987
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-33 Score=297.15 Aligned_cols=233 Identities=35% Similarity=0.573 Sum_probs=198.8
Q ss_pred cCHHHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCC
Q 004345 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE 564 (760)
Q Consensus 485 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~ 564 (760)
+.+.++...+++|++.+.||+|+||.||+|+.++++.||||++........+.+.+|+.++++++||||+++++++.+.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 44556667889999999999999999999998889999999998766667788999999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhh------------------------------------------------------ccccceeE
Q 004345 565 ENMLIYEYMPNKSLDSFL------------------------------------------------------FDFGLARI 590 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L------------------------------------------------------~DFGla~~ 590 (760)
..++||||+++|+|.++| +|||+++.
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 999999999999997753 39999987
Q ss_pred ecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccc
Q 004345 591 FGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDL 670 (760)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (760)
..............||+.|+|||.+....++.++||||||+++|||++|+.|+.............|.......+...+.
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSS
T ss_pred cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHh
Confidence 64333333334467999999999999999999999999999999999999999766555556666666666666777777
Q ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 671 VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 671 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
+++.+...........+.+++.+||+.||++|||+.||++.|+.+.+
T Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 88777777778888999999999999999999999999999998753
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-34 Score=298.74 Aligned_cols=197 Identities=22% Similarity=0.281 Sum_probs=146.2
Q ss_pred cccccccccccCCceeEEEEEe----cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL----QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++|++.+.||+|+||.||+|+. .+++.||||++++.. ......+.+|+++|++++|||||++++++.+++..+|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5799999999999999999985 246889999997542 2344578999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCccc
Q 004345 569 IYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 569 V~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
|||||++|+|.++| +|||+|+...... .
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~ 181 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--K 181 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-------C
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC--c
Confidence 99999999998874 4999998653322 2
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
.....+||+.|||||++....|+.++||||+||+||||+||+.||...... .+.... . .+.. .+...
T Consensus 182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~---~~~~~i---~-~~~~------~~p~~ 248 (304)
T 3ubd_A 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK---ETMTMI---L-KAKL------GMPQF 248 (304)
T ss_dssp CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH---H-HCCC------CCCTT
T ss_pred cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH---HHHHHH---H-cCCC------CCCCc
Confidence 233578999999999999999999999999999999999999999643221 111111 1 1110 01111
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCH-----HHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNM-----PTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~-----~ev~~ 710 (760)
....+.+++.+||+.||++|||+ +|+++
T Consensus 249 ----~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 249 ----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred ----CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 12456788899999999999985 56654
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-32 Score=290.16 Aligned_cols=198 Identities=25% Similarity=0.370 Sum_probs=139.8
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCC--------
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVERE-------- 564 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~-------- 564 (760)
++|++.+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4689999999999999999995 4789999999975433 34567999999999999999999999987654
Q ss_pred ----eeEEEEeccCCCChhhhh-----------------------------------------------------ccccc
Q 004345 565 ----ENMLIYEYMPNKSLDSFL-----------------------------------------------------FDFGL 587 (760)
Q Consensus 565 ----~~~lV~Ey~~~gsL~~~L-----------------------------------------------------~DFGl 587 (760)
..+||||||++|+|.++| +|||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence 368999999999998763 49999
Q ss_pred eeEecCCCcc----------cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHH
Q 004345 588 ARIFGGNQDQ----------AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGY 657 (760)
Q Consensus 588 a~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~ 657 (760)
|+.+...... ......+||+.|||||++.+..|+.++|||||||++|||++ ||... .+. ...
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~--~~~---~~~ 236 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ--MER---VRT 236 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH--HHH---HHH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc--cHH---HHH
Confidence 9987543221 12234679999999999999999999999999999999996 65311 100 000
Q ss_pred HHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 658 AWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 658 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. .......... . .........+++.+||+.||++|||+.|+++
T Consensus 237 ~-~~~~~~~~p~----~-----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 237 L-TDVRNLKFPP----L-----FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp H-HHHHTTCCCH----H-----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H-HHHhcCCCCC----C-----CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 1111111100 0 1112244567899999999999999999987
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=288.01 Aligned_cols=235 Identities=40% Similarity=0.650 Sum_probs=197.3
Q ss_pred ccccccCHHHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeee
Q 004345 480 QDLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLG 558 (760)
Q Consensus 480 ~~~~~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g 558 (760)
..+..++++++....++|++.+.||+|+||.||+|+..+++.||||++.... ......|.+|++++++++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 3456789999999999999999999999999999998889999999997543 233447999999999999999999999
Q ss_pred EEEeCCeeEEEEeccCCCChhhhh--------------------------------------------------------
Q 004345 559 CCVEREENMLIYEYMPNKSLDSFL-------------------------------------------------------- 582 (760)
Q Consensus 559 ~~~~~~~~~lV~Ey~~~gsL~~~L-------------------------------------------------------- 582 (760)
++...+..++||||+++|+|.++|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 999999999999999999987652
Q ss_pred -ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC--cccccccHHHHHH
Q 004345 583 -FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFY--HEEFELTLLGYAW 659 (760)
Q Consensus 583 -~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~--~~~~~~~~~~~~~ 659 (760)
+|||+++....... .......||+.|+|||.+....++.++||||||+++|||++|+.||... ..........+..
T Consensus 175 l~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 175 VGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp ECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred eccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 38999987643322 2233456999999999999889999999999999999999999998632 1223445666777
Q ss_pred HhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 660 KLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 660 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
..........+.+..+...........+.+++.+||+.||++|||+.||+++|++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 77777777788888877788888899999999999999999999999999999875
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=299.56 Aligned_cols=200 Identities=22% Similarity=0.275 Sum_probs=159.1
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
++|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|+.+|++++|||||++++++.+....+||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 6899999999999999999996 478999999997665556678999999999999999999999999999999999999
Q ss_pred CCCChhhhh-----------------------------------------------------ccccceeEecCCCccccc
Q 004345 574 PNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 574 ~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
++|+|.++| +|||+|+.+.... ..
T Consensus 237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~---~~ 313 (573)
T 3uto_A 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SV 313 (573)
T ss_dssp CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS---EE
T ss_pred CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC---ce
Confidence 999997763 3999999875432 23
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||......+ ....+. .... .. +......
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~---~~~~i~----~~~~-~~-~~~~~~~-- 382 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE---TLRNVK----SCDW-NM-DDSAFSG-- 382 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHHHHH----TTCC-CC-CSGGGTT--
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---HHHHHH----hCCC-CC-CcccccC--
Confidence 45689999999999999999999999999999999999999996432221 111111 1110 00 0000011
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+.+++.+||+.||++|||+.|+++
T Consensus 383 --~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 383 --ISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp --SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1245678889999999999999999987
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-30 Score=279.00 Aligned_cols=155 Identities=24% Similarity=0.385 Sum_probs=127.1
Q ss_pred HHHhccccccccccccCCceeEEEEEec----CCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEeCC
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGKLQ----DGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVERE 564 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~ 564 (760)
+....++|++.++||+|+||.||+|+.+ +++.||||++.+. ....++.+|+++|.++ +|||||++++++.+.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 3345678999999999999999999853 4678999998654 3456788999999998 6999999999999999
Q ss_pred eeEEEEeccCCCChhhhh------------------------------------------------ccccceeEecCCCc
Q 004345 565 ENMLIYEYMPNKSLDSFL------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L------------------------------------------------~DFGla~~~~~~~~ 596 (760)
..+|||||+++|+|.+++ +|||+|+.......
T Consensus 94 ~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp EEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred EEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 999999999999998763 49999987643211
Q ss_pred c--------------------------cccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCC
Q 004345 597 Q--------------------------AATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFY 646 (760)
Q Consensus 597 ~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~ 646 (760)
. ......+||+.|||||++.+. .++.++||||+||++|||++|+.||...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 0 112235799999999999876 4899999999999999999999998643
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=283.65 Aligned_cols=215 Identities=16% Similarity=0.243 Sum_probs=151.2
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeC------Ce
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER------EE 565 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~------~~ 565 (760)
++|++.++||+|+||.||+|+. .+++.||||++++.. ....+.+++|+++|++++|||||++++++... +.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 6799999999999999999996 478999999997543 23456789999999999999999999997643 57
Q ss_pred eEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCC
Q 004345 566 NMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~ 595 (760)
.|||||||+ |+|.++| +|||+|+.+....
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~ 212 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC----
T ss_pred EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCc
Confidence 899999996 6777653 4999998764322
Q ss_pred --cccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC-------
Q 004345 596 --DQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN------- 665 (760)
Q Consensus 596 --~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~------- 665 (760)
........+||+.|||||++.+. .++.++||||+||++|||++|+.||......+....+..........
T Consensus 213 ~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~ 292 (398)
T 4b99_A 213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 292 (398)
T ss_dssp ---CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC----
T ss_pred cccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhh
Confidence 12233457899999999998875 57999999999999999999999996443322211111110000000
Q ss_pred -Cccccccccc-cCCCCHH-----HHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 666 -NVIDLVDPLI-SESGFKM-----EIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 666 -~~~~~~d~~l-~~~~~~~-----~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.....+.... ....+.. ....+++++.+||+.||++|||+.|+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 293 ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp -CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0000000000 0000111 1245778999999999999999999987
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=270.21 Aligned_cols=211 Identities=25% Similarity=0.379 Sum_probs=162.3
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.++|++.++||+|+||.||+|... +++.||+|++........+.|.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 357889999999999999999964 6889999998766666778899999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCccc---
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQA--- 598 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~--- 598 (760)
+++|+|.++| +|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 9999998763 3999998764332211
Q ss_pred ---------ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccc
Q 004345 599 ---------ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVID 669 (760)
Q Consensus 599 ---------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (760)
......||+.|+|||.+....++.++||||||+++|||++|..|+.......... ......
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~----------~~~~~~ 238 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF----------GLNVRG 238 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS----------SBCHHH
T ss_pred ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH----------hhhhhc
Confidence 1114579999999999999999999999999999999999999886433221100 000001
Q ss_pred cccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 670 LVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 670 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
..+..... .....+.+++.+||+.||++|||+.++++.|+++...
T Consensus 239 ~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 239 FLDRYCPP----NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp HHHHTCCT----TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccccCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11111111 1123577889999999999999999999999887543
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-29 Score=263.57 Aligned_cols=231 Identities=36% Similarity=0.555 Sum_probs=179.6
Q ss_pred cccccCHHHHHHhccccccc------cccccCCceeEEEEEecCCcEEEEEEecccC----ccchHhHHHHHHHHhcCCC
Q 004345 481 DLLVFNFEELANATNNFQLA------NKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS----GQGQEEFMNEVMVISNLQH 550 (760)
Q Consensus 481 ~~~~~~~~~l~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~----~~~~~~f~~E~~~l~~l~H 550 (760)
....|+++++..++++|... +.||+|+||.||+|.. +++.||||++.... ....+.|.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678999999999998877 8899999999999997 57899999987432 2345679999999999999
Q ss_pred CccceeeeEEEeCCeeEEEEeccCCCChhhhh------------------------------------------------
Q 004345 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFL------------------------------------------------ 582 (760)
Q Consensus 551 ~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L------------------------------------------------ 582 (760)
|||+++++++.+.+..++||||+++++|.+++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA 169 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC
Confidence 99999999999999999999999999997653
Q ss_pred -----ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHH
Q 004345 583 -----FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGY 657 (760)
Q Consensus 583 -----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~ 657 (760)
+|||+++...............||+.|+|||.+.+ .++.++||||||+++|||++|+.|+......... ..+
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--~~~ 246 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL--LDI 246 (307)
T ss_dssp CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT--THH
T ss_pred CcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH--HHH
Confidence 39999987654333333344678999999998764 5899999999999999999999998754332211 111
Q ss_pred HHHhc-cCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 658 AWKLW-NDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 658 ~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
..... ....+.+.+++.+. .........+.+++.+||+.||.+|||+.+|+++|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 247 KEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHTTSCCHHHHSCSSCS-CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHhhhhhhhhhhhcccccc-ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 11111 12223344444332 345566788899999999999999999999999998763
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-30 Score=271.69 Aligned_cols=215 Identities=26% Similarity=0.402 Sum_probs=155.1
Q ss_pred HHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe
Q 004345 488 EELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE 565 (760)
Q Consensus 488 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~ 565 (760)
.++....++|++.+.||+|+||.||+|+. +++.||||++.... ....++|.+|++++++++||||+++++++...+.
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 34445567899999999999999999987 58899999997543 2334679999999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhh-------------------------------------------------------ccccceeE
Q 004345 566 NMLIYEYMPNKSLDSFL-------------------------------------------------------FDFGLARI 590 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L-------------------------------------------------------~DFGla~~ 590 (760)
.++||||+++|+|.++| +|||+++.
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 99999999999997653 38998875
Q ss_pred ecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccc
Q 004345 591 FGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDL 670 (760)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (760)
..... .......||+.|+|||.+....++.++|||||||++|||++|+.||....... ....... .....
T Consensus 189 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~---~~~~~~~---~~~~~-- 258 (309)
T 3p86_A 189 KASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ---VVAAVGF---KCKRL-- 258 (309)
T ss_dssp ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH---HHHHHHH---SCCCC--
T ss_pred ccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHh---cCCCC--
Confidence 43221 22334679999999999999999999999999999999999999986433221 1111100 00000
Q ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 671 VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 671 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
.+.. .....+.+++.+||+.||++|||+.+|+++|+..++...
T Consensus 259 ---~~~~----~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 259 ---EIPR----NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp ---CCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred ---CCCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 1111 112457788999999999999999999999999876543
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-30 Score=279.86 Aligned_cols=209 Identities=24% Similarity=0.379 Sum_probs=161.6
Q ss_pred HhccccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
...++|++.+.||+|+||.||+|+.. +++.||||+++... ....++|.+|+++|++++||||+++++++..++..++|
T Consensus 111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 34568899999999999999999975 78999999987542 23446799999999999999999999999999999999
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
|||+++|+|.++| +|||+++.........
T Consensus 191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 9999999998763 3999998754332222
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......+++.|+|||.+....++.++|||||||++|||++ |+.|+....... ... ....+...
T Consensus 271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~---~~~----~~~~~~~~--------- 334 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ---TRE----FVEKGGRL--------- 334 (377)
T ss_dssp CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH---HHH----HHHTTCCC---------
T ss_pred cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHHcCCCC---------
Confidence 2223356789999999998999999999999999999998 999986432211 111 11111110
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
..+......+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 011112245778899999999999999999999998764
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=261.92 Aligned_cols=201 Identities=21% Similarity=0.357 Sum_probs=159.1
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.++|++.+.||+|+||.||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46799999999999999999995 57899999999766666677899999999999999999999999999999999999
Q ss_pred cCCCChhhhh-------------------------------------------------ccccceeEecCCCccccccee
Q 004345 573 MPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 573 ~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
+++|+|.+++ +|||+++....... .....
T Consensus 99 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~ 176 (297)
T 3fxz_A 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTM 176 (297)
T ss_dssp CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--CBCCC
T ss_pred CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--ccCCc
Confidence 9999998763 49999987653322 23346
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
.||+.|+|||.+....++.++|||||||++|||++|+.||........ ......... ... ..+...
T Consensus 177 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------~~~~~~~~~-~~~-------~~~~~~ 242 (297)
T 3fxz_A 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNGT-PEL-------QNPEKL 242 (297)
T ss_dssp CSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHHCS-CCC-------SCGGGS
T ss_pred cCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhCCC-CCC-------CCcccc
Confidence 799999999999999999999999999999999999999864322111 111100000 000 001112
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 243 SAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 245778899999999999999999987
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=270.47 Aligned_cols=218 Identities=22% Similarity=0.276 Sum_probs=161.8
Q ss_pred hccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCC----eeEE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE----ENML 568 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~----~~~l 568 (760)
..++|++.++||+|+||.||+|+.. ++.||||++.... .....+.+|+.++++++|||||++++++.... ..++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 4578999999999999999999875 7899999996542 33445677999999999999999999998754 3699
Q ss_pred EEeccCCCChhhhh-----------------------------------------------------------cccccee
Q 004345 569 IYEYMPNKSLDSFL-----------------------------------------------------------FDFGLAR 589 (760)
Q Consensus 569 V~Ey~~~gsL~~~L-----------------------------------------------------------~DFGla~ 589 (760)
||||+++|+|.++| +|||+++
T Consensus 100 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence 99999999997652 3999998
Q ss_pred EecCCCcccccceeeeeccccCccccccC-----CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH------
Q 004345 590 IFGGNQDQAATKRLVGTYGYMSPEYAMEG-----RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA------ 658 (760)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~------ 658 (760)
.+.............||+.|+|||++... .++.++|||||||++|||++|+.||...............
T Consensus 180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 259 (322)
T 3soc_A 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL 259 (322)
T ss_dssp EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence 87654443334446799999999999863 4667899999999999999999998754333222111110
Q ss_pred ---HHhccCCCccccccccccCC-CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 659 ---WKLWNDNNVIDLVDPLISES-GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 659 ---~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
......... .+.+... ........+.+++.+||+.||++|||+.||+++|+++.
T Consensus 260 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 260 EDMQEVVVHKKK----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp HHHHHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhhhhhhcccC----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 001111111 1111111 12234567889999999999999999999999998764
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=271.81 Aligned_cols=209 Identities=26% Similarity=0.425 Sum_probs=159.2
Q ss_pred ccccccccccccCCceeEEEEEec----CCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ----DGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
.++|++.+.||+|+||.||+|... .+..||||+++.. .....+.|.+|+.++++++||||+++++++.+++..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 467999999999999999999974 3456999999754 33445689999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||||+++|+|.++| +|||+++.+......
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 207 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence 99999999998763 399999876543222
Q ss_pred -cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 598 -AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 598 -~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
.......+|+.|+|||.+....++.++||||||+++|||++ |+.||...... ...... ..+..
T Consensus 208 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~~~~----~~~~~-------- 272 (325)
T 3kul_A 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR---DVISSV----EEGYR-------- 272 (325)
T ss_dssp CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH---HHHHHH----HTTCC--------
T ss_pred eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHH----HcCCC--------
Confidence 12223456778999999998999999999999999999999 99998643221 111111 11100
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
...+......+.+++.+||+.||++|||+.+|+++|+.+.+.
T Consensus 273 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 273 -LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred -CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 001111234677899999999999999999999999998644
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-29 Score=285.32 Aligned_cols=199 Identities=24% Similarity=0.294 Sum_probs=149.8
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHH---HHHHhcCCCCccceeeeEEEeCCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNE---VMVISNLQHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E---~~~l~~l~H~nIv~l~g~~~~~~~~ 566 (760)
.++|++.++||+|+||.||+|+.. +++.||||++++.. ......+.+| +.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999964 68999999997531 2233334444 6677888999999999999999999
Q ss_pred EEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCc
Q 004345 567 MLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~ 596 (760)
|||||||+||+|..+| +|||+|+.+....
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~- 346 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 346 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC-
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCC-
Confidence 9999999999998874 4999999875332
Q ss_pred ccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
....+||+.|||||++.. ..|+.++||||+||+||||++|+.||..........+. ...... . ..+
T Consensus 347 ---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~---~~i~~~-~------~~~ 413 (689)
T 3v5w_A 347 ---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID---RMTLTM-A------VEL 413 (689)
T ss_dssp ---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHH---HHHHHC-C------CCC
T ss_pred ---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---HhhcCC-C------CCC
Confidence 335689999999999975 57999999999999999999999999643222111111 111000 0 011
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCC-----HHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPN-----MPTVVS 710 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 710 (760)
... -...+.+++.+||+.||.+|++ +.||.+
T Consensus 414 p~~----~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 414 PDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CTT----SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred Ccc----CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 111 1245678889999999999998 577764
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-29 Score=273.04 Aligned_cols=207 Identities=25% Similarity=0.390 Sum_probs=161.0
Q ss_pred ccccccccccccCCceeEEEEEec--------CCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEeC
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ--------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVER 563 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~ 563 (760)
.++|++.+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|+.+++++ +||||++++++|...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 468999999999999999999852 34579999997543 23456899999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChhhhh-------------------------------------------------------------
Q 004345 564 EENMLIYEYMPNKSLDSFL------------------------------------------------------------- 582 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L------------------------------------------------------------- 582 (760)
+..++||||+++|+|.++|
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 239 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC
Confidence 9999999999999986542
Q ss_pred -----ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHH
Q 004345 583 -----FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLG 656 (760)
Q Consensus 583 -----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~ 656 (760)
+|||+++.+.............+|+.|+|||++....++.++|||||||++|||++ |+.||...... .+..
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---~~~~ 316 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---ELFK 316 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHH
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHH
Confidence 39999987654433333344567889999999999999999999999999999999 99998643222 1111
Q ss_pred HHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 657 YAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 657 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.. ..+... ..+......+.+++.+||+.||++|||+.|+++.|++++
T Consensus 317 ~~----~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 317 LL----KEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp HH----HTTCCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HH----hcCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11 111110 011112346778899999999999999999999998875
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-28 Score=259.88 Aligned_cols=213 Identities=21% Similarity=0.305 Sum_probs=165.8
Q ss_pred cccCHHHHHHhccc----------cccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCC
Q 004345 483 LVFNFEELANATNN----------FQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHR 551 (760)
Q Consensus 483 ~~~~~~~l~~~~~~----------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~ 551 (760)
..++++++..+++. |+..+.||+|+||.||+|+.. +++.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 35778888877653 777889999999999999975 7899999999876666778899999999999999
Q ss_pred ccceeeeEEEeCCeeEEEEeccCCCChhhhh-------------------------------------------------
Q 004345 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFL------------------------------------------------- 582 (760)
Q Consensus 552 nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~L------------------------------------------------- 582 (760)
||+++++++...+..++||||+++++|.+++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl 182 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKL 182 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEE
Confidence 9999999999999999999999999998763
Q ss_pred ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhc
Q 004345 583 FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLW 662 (760)
Q Consensus 583 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 662 (760)
+|||+++.+..... ......||+.|+|||++....++.++||||||+++|||++|+.||...... .......
T Consensus 183 ~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~---~~~~~~~--- 254 (321)
T 2c30_A 183 SDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV---QAMKRLR--- 254 (321)
T ss_dssp CCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHHHH---
T ss_pred eeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHh---
Confidence 49999987653322 223467999999999999999999999999999999999999998643221 1111111
Q ss_pred cCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 663 NDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 663 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
... .+.+.. .......+.+++.+||+.||++|||+.|+++.
T Consensus 255 -~~~-----~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 255 -DSP-----PPKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp -HSS-----CCCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -cCC-----CCCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 110 011100 01112456788889999999999999999873
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-30 Score=270.22 Aligned_cols=217 Identities=25% Similarity=0.400 Sum_probs=157.3
Q ss_pred ccccccccccccCCceeEEEEEe-----cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeC--Cee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-----QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~ 566 (760)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.|.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 36789999999999999999984 36789999999876666667899999999999999999999998654 458
Q ss_pred EEEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCC
Q 004345 567 MLIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~ 595 (760)
++||||+++|+|.++| +|||+++......
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence 9999999999998763 3999998764332
Q ss_pred cc-cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccc---------cccHHHHHHHhccCC
Q 004345 596 DQ-AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEF---------ELTLLGYAWKLWNDN 665 (760)
Q Consensus 596 ~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~---------~~~~~~~~~~~~~~~ 665 (760)
.. .......++..|+|||.+....++.++||||||+++|||++|..|+.....+. ..............+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (295)
T 3ugc_A 169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248 (295)
T ss_dssp -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhcc
Confidence 21 12223456778999999999999999999999999999999999875321110 000000011111111
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCC
Q 004345 666 NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDL 719 (760)
Q Consensus 666 ~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~ 719 (760)
. ....+......+.+++.+||+.||++|||+.||+++|+++.+++
T Consensus 249 ~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 249 G---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp C---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred C---------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 0 11111222356788999999999999999999999999876544
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-29 Score=268.32 Aligned_cols=206 Identities=24% Similarity=0.414 Sum_probs=151.5
Q ss_pred cccccccccccCCceeEEEEEec-CCc----EEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQ----EIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++|++.+.||+|+||.||+|+.. +++ .||+|.+... .....++|.+|+.++++++||||++++++|.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 56899999999999999999953 343 3688888643 3355678999999999999999999999998754 789
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
|+||+++|+|.+++ +|||+++.+......
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 173 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCccc
Confidence 99999999998763 399999876544433
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....... +..... .+. .
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~~~----~~~---------~ 237 (327)
T 3poz_A 174 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE----KGE---------R 237 (327)
T ss_dssp ------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHH----TTC---------C
T ss_pred ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HHHHHH----cCC---------C
Confidence 33344567889999999999999999999999999999999 999986433221 111111 111 0
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
...+......+.+++.+||+.||++|||+.||+++|+.+.+
T Consensus 238 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 238 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 01111223467889999999999999999999999987643
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=6e-29 Score=279.48 Aligned_cols=214 Identities=29% Similarity=0.426 Sum_probs=160.2
Q ss_pred HHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 489 ELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 489 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++....++|++.++||+|+||.||+|....+..||||+++... ...++|.+|+.+|++++||||+++++++.+ +..+|
T Consensus 178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i 255 (452)
T 1fmk_A 178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 255 (452)
T ss_dssp CSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence 3444567899999999999999999999888889999997543 346789999999999999999999999876 67899
Q ss_pred EEeccCCCChhhhh----------------------------------------------------ccccceeEecCCCc
Q 004345 569 IYEYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 569 V~Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~ 596 (760)
||||+++|+|.++| +|||+++.......
T Consensus 256 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred EehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 99999999998763 39999987643221
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
.......+++.|+|||.+....++.++|||||||++|||++ |+.|+...... .....+ ..+...
T Consensus 336 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~---~~~~~i----~~~~~~------- 400 (452)
T 1fmk_A 336 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLDQV----ERGYRM------- 400 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHHHH----HTTCCC-------
T ss_pred -ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HcCCCC-------
Confidence 12223457889999999999999999999999999999999 89998643221 111111 111100
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCCC
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPA 721 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~~ 721 (760)
..+......+.+++.+||+.||++|||+.+|+++|++.....+.
T Consensus 401 --~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 401 --PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred --CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 01112234677899999999999999999999999988655443
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-29 Score=275.45 Aligned_cols=208 Identities=28% Similarity=0.469 Sum_probs=149.0
Q ss_pred ccccccccccccCCceeEEEEEec----CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ----DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
.++|++.+.||+|+||.||+|+.. ++..||||+++... ....++|.+|+.++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 457999999999999999999864 56789999997542 3445689999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||||+++|+|.++| +|||+++........
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 99999999998763 399999876533221
Q ss_pred c-ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 598 A-ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 598 ~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
. ......+++.|+|||.+....++.++|||||||++|||++ |+.||...... ...... ..+ .
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~---~~~~~i----~~~---------~ 267 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ---DVIKAV----DEG---------Y 267 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH---HHHHHH----HTT---------E
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HcC---------C
Confidence 1 1222345778999999999999999999999999999998 99998643221 111111 111 0
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
....+......+.+++.+||+.||++||++.+|+++|+++++
T Consensus 268 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 011111223567889999999999999999999999988754
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-29 Score=281.43 Aligned_cols=212 Identities=29% Similarity=0.410 Sum_probs=164.9
Q ss_pred HHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 488 EELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 488 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
+++....++|++.+.||+|+||.||+|...++..||||+++... ...+.|.+|+.+|++++|||||++++++. .+..+
T Consensus 181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~ 258 (454)
T 1qcf_A 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIY 258 (454)
T ss_dssp TCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred cceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccE
Confidence 44455678899999999999999999999888999999997543 45788999999999999999999999986 66789
Q ss_pred EEEeccCCCChhhhh----------------------------------------------------ccccceeEecCCC
Q 004345 568 LIYEYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~ 595 (760)
+||||+++|+|.++| +|||+++......
T Consensus 259 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp EEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 999999999998763 3999998754322
Q ss_pred cccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 596 DQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
. .......+|+.|+|||.+....++.++|||||||+||||++ |+.||...... ....... .+..
T Consensus 339 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~---~~~~~i~----~~~~------- 403 (454)
T 1qcf_A 339 Y-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRALE----RGYR------- 403 (454)
T ss_dssp H-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHHHH----HTCC-------
T ss_pred e-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHHHH----cCCC-------
Confidence 1 12223456789999999999999999999999999999999 99998643221 1111111 1100
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
...+......+.+++.+||+.||++|||+.+|+++|++....
T Consensus 404 --~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 404 --MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 001111235677899999999999999999999999887543
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-29 Score=259.27 Aligned_cols=205 Identities=26% Similarity=0.440 Sum_probs=160.1
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.++|++.+.||+|+||.||+|...+++.||||++.... ...+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 46789999999999999999998888999999997543 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhh---------------------------------------------------ccccceeEecCCCcccccce
Q 004345 574 PNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 574 ~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
++++|.+++ +|||+++...... ......
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~ 166 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTG 166 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHSTTS
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccc-cccccC
Confidence 999998763 3899987653221 112233
Q ss_pred eeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 603 LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
..+|+.|+|||.+....++.++||||||+++|||++ |+.||...... ...... ..+. .... +.
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~---~~~~~~----~~~~-----~~~~----~~ 230 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVEDI----STGF-----RLYK----PR 230 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHHH----HTTC-----CCCC----CT
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH---HHHHHH----hcCc-----cCCC----CC
Confidence 456788999999999999999999999999999999 89998643221 111111 1110 0000 11
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.....+.+++.+||+.||++|||+.+++++|+++.
T Consensus 231 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 11245778889999999999999999999998864
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=255.30 Aligned_cols=206 Identities=26% Similarity=0.445 Sum_probs=161.4
Q ss_pred hccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
..++|++.+.||+|+||.||+|...++..||||++.... ...+++.+|+.++.+++||||+++++++.+....++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 346799999999999999999999888899999997543 3457799999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------ccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
+++++|.+++ +|||+++........ ...
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-~~~ 163 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV-SSV 163 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE-ECC
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhh-ccc
Confidence 9999998763 399999876443322 222
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...+|+.|+|||.+....++.++||||||+++|||++ |+.||....... ..... ..+.. ...+ .
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~-~~~~~--~~~~---~--- 228 (268)
T 3sxs_A 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE------VVLKV-SQGHR--LYRP---H--- 228 (268)
T ss_dssp SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHH-HTTCC--CCCC---T---
T ss_pred CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH------HHHHH-HcCCC--CCCC---C---
Confidence 3456778999999998899999999999999999999 999986433221 11111 11110 0001 1
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.....+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 229 -~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 229 -LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp -TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred -cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 11245778899999999999999999999998874
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-29 Score=271.62 Aligned_cols=218 Identities=24% Similarity=0.387 Sum_probs=166.1
Q ss_pred ccCHHHHHHhccccccccccccCCceeEEEEEe------cCCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccce
Q 004345 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVR 555 (760)
Q Consensus 484 ~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~ 555 (760)
.+...++....++|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|++++.++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 456777888889999999999999999999973 245789999997543 23456799999999999 7999999
Q ss_pred eeeEEEeCCe-eEEEEeccCCCChhhh-----------------------------------------------------
Q 004345 556 LLGCCVEREE-NMLIYEYMPNKSLDSF----------------------------------------------------- 581 (760)
Q Consensus 556 l~g~~~~~~~-~~lV~Ey~~~gsL~~~----------------------------------------------------- 581 (760)
+++++.+.+. .++||||+++|+|.++
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 9999987654 8999999999887532
Q ss_pred ---------------------------------------------------------------hccccceeEecCCCccc
Q 004345 582 ---------------------------------------------------------------LFDFGLARIFGGNQDQA 598 (760)
Q Consensus 582 ---------------------------------------------------------------L~DFGla~~~~~~~~~~ 598 (760)
|+|||+++.+.......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 250 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 250 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCE
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccch
Confidence 13999998764444333
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......||+.|+|||++....++.++|||||||++|||++ |+.||....... ... .....+.... .
T Consensus 251 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~----~~~~~~~~~~-----~-- 317 (359)
T 3vhe_A 251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFC----RRLKEGTRMR-----A-- 317 (359)
T ss_dssp EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHH----HHHHHTCCCC-----C--
T ss_pred hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH--HHH----HHHHcCCCCC-----C--
Confidence 4445678999999999999999999999999999999998 999986433221 111 1111111100 0
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
+......+.+++..||+.||++||||.||+++|++++
T Consensus 318 --~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 318 --PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 1111245778889999999999999999999998875
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-28 Score=279.19 Aligned_cols=209 Identities=28% Similarity=0.414 Sum_probs=164.0
Q ss_pred HHhccccccccccccCCceeEEEEEecC-CcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 491 ANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 491 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
....++|++.++||+|+||.||+|+... ++.||||+++.. ....++|.+|+.+|++++|||||+++++|...+..+||
T Consensus 216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp BCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred ccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 3445679999999999999999999764 789999999754 34567899999999999999999999999999999999
Q ss_pred EeccCCCChhhhh----------------------------------------------------ccccceeEecCCCcc
Q 004345 570 YEYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 570 ~Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||||++|+|.++| +|||+++.......
T Consensus 295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~- 373 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY- 373 (495)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE-
T ss_pred EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCce-
Confidence 9999999998763 39999987643322
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......+++.|+|||.+....++.++|||||||+||||++ |+.|+...... ....... .+. .
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---~~~~~~~----~~~---------~ 437 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYELLE----KDY---------R 437 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHHHH----TTC---------C
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHHHH----cCC---------C
Confidence 22233456789999999999999999999999999999999 88888643221 1111111 110 0
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
...+......+.+++.+||+.||++|||+.+|+++|+.+..
T Consensus 438 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 11111223567789999999999999999999999988753
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-29 Score=274.66 Aligned_cols=208 Identities=31% Similarity=0.464 Sum_probs=159.5
Q ss_pred ccccccccccccCCceeEEEEEec------CCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 566 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++... ......++.+|+.++++++|||||++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467999999999999999999843 4678999999754 334456799999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhh------------------------------------------------------------cccc
Q 004345 567 MLIYEYMPNKSLDSFL------------------------------------------------------------FDFG 586 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L------------------------------------------------------------~DFG 586 (760)
++||||+++|+|.++| +|||
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG 229 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 229 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCc
Confidence 9999999999997653 3888
Q ss_pred ceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCC
Q 004345 587 LARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDN 665 (760)
Q Consensus 587 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (760)
+++.+.............+|+.|+|||.+....++.++|||||||++|||++ |+.||...... .+.... ..+
T Consensus 230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~---~~~~~i----~~~ 302 (367)
T 3l9p_A 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---EVLEFV----TSG 302 (367)
T ss_dssp HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHHH----HTT
T ss_pred cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HcC
Confidence 8875432222223334567899999999999999999999999999999998 99998643221 111111 111
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 666 NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 666 ~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
.... .+......+.+++.+||+.||++|||+.+|++.|+....
T Consensus 303 ~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 303 GRMD---------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp CCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCC---------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 1100 011122457789999999999999999999999987643
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=257.94 Aligned_cols=207 Identities=27% Similarity=0.443 Sum_probs=158.4
Q ss_pred HhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
...++|++.+.||+|+||.||+|...++..||||++.... ...+++.+|++++.+++||||+++++++.+.+..++|||
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 3457899999999999999999999888899999997543 345789999999999999999999999999999999999
Q ss_pred ccCCCChhhhh---------------------------------------------------ccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|+++++|.+++ +|||+++...... ....
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~ 178 (283)
T 3gen_A 100 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSS 178 (283)
T ss_dssp CCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HHST
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccc-cccc
Confidence 99999998763 3899987653221 1122
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
....+|+.|+|||.+....++.++||||||+++|||++ |+.||....... ..... ..+. ......
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~----~~~~-----~~~~~~-- 244 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE---TAEHI----AQGL-----RLYRPH-- 244 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HHHHH----HTTC-----CCCCCT--
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH---HHHHH----hccc-----CCCCCC--
Confidence 23456788999999999999999999999999999998 999986433221 11111 1110 000011
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.....+.+++.+||+.||++|||+.++++.|+++.
T Consensus 245 --~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 245 --LASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp --TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 11245778999999999999999999999998865
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-28 Score=264.20 Aligned_cols=214 Identities=22% Similarity=0.376 Sum_probs=147.7
Q ss_pred HHHHhccccccccccccCCceeEEEEEecCC----cEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEe
Q 004345 489 ELANATNNFQLANKLGQGGFGPVYKGKLQDG----QEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE 562 (760)
Q Consensus 489 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~----~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~ 562 (760)
++....++|++.+.||+|+||.||+|+.... ..||||+++.. .....+.|.+|++++++++||||+++++++..
T Consensus 17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 96 (323)
T 3qup_A 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96 (323)
T ss_dssp TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence 3444567899999999999999999996533 27999999754 33456789999999999999999999999988
Q ss_pred CCee------EEEEeccCCCChhhhh------------------------------------------------------
Q 004345 563 REEN------MLIYEYMPNKSLDSFL------------------------------------------------------ 582 (760)
Q Consensus 563 ~~~~------~lV~Ey~~~gsL~~~L------------------------------------------------------ 582 (760)
.... ++||||+++|+|.+++
T Consensus 97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCE
T ss_pred cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCE
Confidence 7665 9999999999997653
Q ss_pred --ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHH
Q 004345 583 --FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAW 659 (760)
Q Consensus 583 --~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~ 659 (760)
+|||+++...............+++.|+|||.+....++.++|||||||++|||++ |+.||...... .......
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~~~~~ 253 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA---EIYNYLI 253 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHHHHH
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH---HHHHHHh
Confidence 39999987654333333334567889999999999999999999999999999999 89898643322 1111111
Q ss_pred HhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 660 KLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 660 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
.+.... .+......+.+++.+||+.||++|||+.++++.|++++..
T Consensus 254 ----~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 254 ----GGNRLK---------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp ----TTCCCC---------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----cCCCCC---------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 111000 1111224678899999999999999999999999988643
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-28 Score=271.79 Aligned_cols=201 Identities=29% Similarity=0.396 Sum_probs=157.1
Q ss_pred HhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCC-eeEEEE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE-ENMLIY 570 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~-~~~lV~ 570 (760)
...++|++.+.||+|+||.||+|... ++.||||+++... ..+.|.+|+.+|++++|||||++++++.+.+ ..++||
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 34578999999999999999999985 7899999997543 5678999999999999999999999988765 789999
Q ss_pred eccCCCChhhhh----------------------------------------------------ccccceeEecCCCccc
Q 004345 571 EYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 571 Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||+++|+|.++| +|||+++.....
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 342 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 342 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----
Confidence 999999998763 399999864321
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
.....+++.|+|||.+....++.++|||||||++|||++ |+.||....... ....+ ..+...
T Consensus 343 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~~i----~~~~~~--------- 405 (450)
T 1k9a_A 343 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPRV----EKGYKM--------- 405 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHHHH----HTTCCC---------
T ss_pred -ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH----HcCCCC---------
Confidence 112357889999999999999999999999999999998 999986433221 11111 111100
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
..+......+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus 406 ~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 406 DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 111122356778999999999999999999999998763
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-28 Score=261.87 Aligned_cols=203 Identities=23% Similarity=0.356 Sum_probs=154.0
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 67999999999999999999965 78999999986443 23456799999999999999999999999999999999999
Q ss_pred cCCCChhhhh--------------------------------------------------ccccceeEecCCCcccccce
Q 004345 573 MPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 573 ~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
+++|+|.+++ +|||+++.+...........
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 166 (323)
T 3tki_A 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166 (323)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCS
T ss_pred CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCC
Confidence 9999998763 49999987643333333445
Q ss_pred eeeeccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 603 LVGTYGYMSPEYAMEGRF-SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~-s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
..||+.|+|||++....+ +.++|||||||++|||++|+.||........ ....+. .... ...+ ..
T Consensus 167 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~-----~~~~--~~~~------~~ 232 (323)
T 3tki_A 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWK-----EKKT--YLNP------WK 232 (323)
T ss_dssp CCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHHH-----TTCT--TSTT------GG
T ss_pred CccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHh-----cccc--cCCc------cc
Confidence 689999999999987775 7899999999999999999999964332211 111111 1000 0000 01
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 233 KIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 112456788999999999999999999774
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=265.22 Aligned_cols=218 Identities=24% Similarity=0.380 Sum_probs=161.1
Q ss_pred cccccccccccCCceeEEEEEe-----cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEE--eCCeeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-----QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCV--EREENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~--~~~~~~ 567 (760)
++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5789999999999999999984 467899999998766666678999999999999999999999987 455689
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCc
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+||||+++++|.++| +|||+++.......
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 182 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 182 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCS
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCc
Confidence 999999999998763 39999987754332
Q ss_pred c-cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC------Cccc
Q 004345 597 Q-AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN------NVID 669 (760)
Q Consensus 597 ~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 669 (760)
. .......+|+.|+|||.+....++.++||||||+++|||++|+.|+.....+. ........ ...+
T Consensus 183 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 183 YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF-------LRMMGCERDVPALSRLLE 255 (327)
T ss_dssp EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-------HHHCC----CCHHHHHHH
T ss_pred cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh-------hhhcccccccccHHHHHH
Confidence 2 22234567888999999999999999999999999999999999975321110 00000000 0011
Q ss_pred cccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCC
Q 004345 670 LVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDL 719 (760)
Q Consensus 670 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~ 719 (760)
.+........+......+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 256 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 256 LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred HhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 11111111112223356788999999999999999999999999876543
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-27 Score=252.16 Aligned_cols=219 Identities=21% Similarity=0.258 Sum_probs=163.4
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC--eeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE--ENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~--~~~lV~ 570 (760)
++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 67999999999999999999965 58999999997543 345678899999999999999999999998765 779999
Q ss_pred eccCCCChhhhh---------------------------------------------------------ccccceeEecC
Q 004345 571 EYMPNKSLDSFL---------------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 571 Ey~~~gsL~~~L---------------------------------------------------------~DFGla~~~~~ 593 (760)
||+++++|.++| +|||+++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 999999997652 39999987643
Q ss_pred CCcccccceeeeeccccCccccc--------cCCCCccchhHHHHHHHHHHHhCCCCCCCCccccc-ccHHHHHHHhccC
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAM--------EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFE-LTLLGYAWKLWND 664 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~--------~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~-~~~~~~~~~~~~~ 664 (760)
... .....||+.|+|||++. ...++.++|||||||++|||++|+.||........ .............
T Consensus 169 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~ 245 (319)
T 4euu_A 169 DEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245 (319)
T ss_dssp TCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCT
T ss_pred CCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCc
Confidence 322 22457999999999986 57789999999999999999999999864332221 1111111111111
Q ss_pred CCcccc---cc------c--cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 665 NNVIDL---VD------P--LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 665 ~~~~~~---~d------~--~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
...... .. + .............+.+++.+||+.||++|||++|+++...+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred ccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 111000 00 0 1111234555677889999999999999999999999987764
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-28 Score=268.67 Aligned_cols=217 Identities=25% Similarity=0.376 Sum_probs=164.9
Q ss_pred hccccccccccccCCceeEEEEEec--------CCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEe
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ--------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~ 562 (760)
..++|.+.++||+|+||.||+|+.. .+..||||+++... ....+++.+|+++++++ +|||||++++++..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 4578999999999999999999852 23579999997543 33456899999999999 89999999999999
Q ss_pred CCeeEEEEeccCCCChhhhh------------------------------------------------------------
Q 004345 563 REENMLIYEYMPNKSLDSFL------------------------------------------------------------ 582 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~L------------------------------------------------------------ 582 (760)
++..++||||+++|+|.++|
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~ 226 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 226 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcC
Confidence 99999999999999987542
Q ss_pred ------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHH
Q 004345 583 ------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLL 655 (760)
Q Consensus 583 ------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~ 655 (760)
+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.|+...... .+.
T Consensus 227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~---~~~ 303 (382)
T 3tt0_A 227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---ELF 303 (382)
T ss_dssp TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHH
T ss_pred CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHH
Confidence 39999987654333333444567899999999999999999999999999999999 99998643221 111
Q ss_pred HHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCCCCCCC
Q 004345 656 GYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQP 725 (760)
Q Consensus 656 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~~p~~p 725 (760)
.....+..... .. .....+.+++.+||+.||++|||+.||++.|+++.........+
T Consensus 304 ----~~~~~~~~~~~-----~~----~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~ 360 (382)
T 3tt0_A 304 ----KLLKEGHRMDK-----PS----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMG 360 (382)
T ss_dssp ----HHHHTTCCCCC-----CS----SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC--
T ss_pred ----HHHHcCCCCCC-----Cc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCC
Confidence 11111111110 11 12245778899999999999999999999999986554443333
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-28 Score=260.23 Aligned_cols=199 Identities=23% Similarity=0.343 Sum_probs=155.7
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
..++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 346899999999999999999996 57899999999754 233456789999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||+++|+|.++| +|||+++...... .
T Consensus 93 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---~ 169 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---K 169 (328)
T ss_dssp ECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC---G
T ss_pred EECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC---c
Confidence 9999999998763 3999997654322 2
Q ss_pred cceeeeeccccCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFS-EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s-~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
....+||+.|+|||.+.+..+. .++|||||||++|||++|+.||...... .+.. ... .+.. .+
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~---~i~-~~~~------~~--- 233 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK---ELRE---RVL-RGKY------RI--- 233 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---HHH-HCCC------CC---
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH---HHHH---HHH-hCCC------CC---
Confidence 3346799999999999988765 8999999999999999999998643221 1111 111 1110 00
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
+......+.+++.+||+.||.+|||+.|+++.
T Consensus 234 -p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 -PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11122457788899999999999999999873
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-28 Score=260.81 Aligned_cols=211 Identities=26% Similarity=0.363 Sum_probs=163.0
Q ss_pred HHhccccccccccccCCceeEEEEEe------cCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeC
Q 004345 491 ANATNNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER 563 (760)
Q Consensus 491 ~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~ 563 (760)
....++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 33467899999999999999999985 235789999997543 34456899999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhh-------------------------------------------------------------
Q 004345 564 EENMLIYEYMPNKSLDSFL------------------------------------------------------------- 582 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L------------------------------------------------------------- 582 (760)
+..++||||+++++|.++|
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp 178 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAA 178 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccch
Confidence 9999999999999886432
Q ss_pred -------------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcc
Q 004345 583 -------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHE 648 (760)
Q Consensus 583 -------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~ 648 (760)
+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 39999987754443333344567889999999999899999999999999999999 9999864332
Q ss_pred cccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 649 EFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
.. +.... ..+.... .+......+.+++.+||+.||++|||+.+|++.|++++.
T Consensus 259 ~~---~~~~~----~~~~~~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 ER---LFNLL----KTGHRME---------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp GG---HHHHH----HTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH---HHHHh----hcCCcCC---------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 21 11111 1111100 111122467789999999999999999999999988753
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-28 Score=261.73 Aligned_cols=218 Identities=28% Similarity=0.420 Sum_probs=166.9
Q ss_pred ccCHHHHHHhccccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCcccee
Q 004345 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRL 556 (760)
Q Consensus 484 ~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l 556 (760)
.+..+++....++|++.+.||+|+||.||+|+.. +++.||||++.... ......|.+|+.++++++||||+++
T Consensus 14 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 93 (322)
T 1p4o_A 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 93 (322)
T ss_dssp CCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred ccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeee
Confidence 3445566677889999999999999999999854 36789999997543 2345579999999999999999999
Q ss_pred eeEEEeCCeeEEEEeccCCCChhhhh------------------------------------------------------
Q 004345 557 LGCCVEREENMLIYEYMPNKSLDSFL------------------------------------------------------ 582 (760)
Q Consensus 557 ~g~~~~~~~~~lV~Ey~~~gsL~~~L------------------------------------------------------ 582 (760)
++++.+.+..++||||+++|+|.++|
T Consensus 94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~ 173 (322)
T 1p4o_A 94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 173 (322)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT
T ss_pred EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcC
Confidence 99999999999999999999987652
Q ss_pred ------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHH
Q 004345 583 ------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLL 655 (760)
Q Consensus 583 ------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~ 655 (760)
+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |+.|+...... ...
T Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~ 250 (322)
T 1p4o_A 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE---QVL 250 (322)
T ss_dssp TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH---HHH
T ss_pred CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH---HHH
Confidence 38999876543332233334567899999999999999999999999999999999 88887543221 111
Q ss_pred HHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 656 GYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 656 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
. ....+..... +......+.+++.+||+.||++|||+.|+++.|++.+.
T Consensus 251 ~----~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 251 R----FVMEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp H----HHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred H----HHHcCCcCCC---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1 1111111110 11122457788999999999999999999999988753
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-28 Score=263.95 Aligned_cols=214 Identities=28% Similarity=0.458 Sum_probs=162.7
Q ss_pred HHHHhccccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEE
Q 004345 489 ELANATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCV 561 (760)
Q Consensus 489 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~ 561 (760)
++....++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.|.+|+.++++++||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34445788999999999999999999964 34789999997543 334567999999999999999999999999
Q ss_pred eCCeeEEEEeccCCCChhhhh-----------------------------------------------------------
Q 004345 562 EREENMLIYEYMPNKSLDSFL----------------------------------------------------------- 582 (760)
Q Consensus 562 ~~~~~~lV~Ey~~~gsL~~~L----------------------------------------------------------- 582 (760)
+.+..++||||+++|+|.++|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl 200 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL 200 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 999999999999999986532
Q ss_pred ---------------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCC
Q 004345 583 ---------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFY 646 (760)
Q Consensus 583 ---------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~ 646 (760)
+|||+++.+.............+|+.|+|||.+....++.++||||||+++|||++ |+.||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 38998876543322223334567899999999999999999999999999999999 99998643
Q ss_pred cccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 647 HEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
... ... .....+.... ... .....+.+++.+||+.||++|||+.+|+++|+++.+.
T Consensus 281 ~~~---~~~----~~~~~~~~~~-----~~~----~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 281 AHE---EVI----YYVRDGNILA-----CPE----NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp CHH---HHH----HHHHTTCCCC-----CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred ChH---HHH----HHHhCCCcCC-----CCC----CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 221 111 1111121111 111 1224677889999999999999999999999988643
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-28 Score=261.45 Aligned_cols=212 Identities=25% Similarity=0.386 Sum_probs=163.3
Q ss_pred HhccccccccccccCCceeEEEEEe------cCCcEEEEEEecccCc-cchHhHHHHHHHHhcC-CCCccceeeeEEEeC
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKASG-QGQEEFMNEVMVISNL-QHRNLVRLLGCCVER 563 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~ 563 (760)
...++|++.+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+.+++++ +||||+++++++..+
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 4457899999999999999999984 3467899999975432 3457899999999999 999999999999999
Q ss_pred CeeEEEEeccCCCChhhhh-------------------------------------------------------------
Q 004345 564 EENMLIYEYMPNKSLDSFL------------------------------------------------------------- 582 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L------------------------------------------------------------- 582 (760)
+..++||||+++|+|.++|
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT 179 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEc
Confidence 9999999999999886532
Q ss_pred -------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccH
Q 004345 583 -------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTL 654 (760)
Q Consensus 583 -------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~ 654 (760)
+|||+++...............+|+.|+|||.+....++.++||||||+++|||++ |+.||....... ..
T Consensus 180 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~ 257 (313)
T 1t46_A 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--KF 257 (313)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--HH
T ss_pred CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--HH
Confidence 39999887654433333344567889999999999999999999999999999999 999986433221 11
Q ss_pred HHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 655 LGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 655 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
........ .... +......+.+++.+||+.||.+|||+.||+++|++.+.+
T Consensus 258 ~~~~~~~~---------~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 258 YKMIKEGF---------RMLS----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HHHHHHTC---------CCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhccCC---------CCCC----cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 11111110 0000 111224677889999999999999999999999987654
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.4e-28 Score=256.46 Aligned_cols=209 Identities=26% Similarity=0.471 Sum_probs=154.7
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
++|++.+.||+|+||.||+|+.. ++.||||++... ...+.|.+|+.++++++||||+++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 57888999999999999999975 788999998643 45678999999999999999999999886 45899999999
Q ss_pred CCChhhhh---------------------------------------------------------ccccceeEecCCCcc
Q 004345 575 NKSLDSFL---------------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 575 ~gsL~~~L---------------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
+|+|.++| +|||+++.....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 99997753 277777654221
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
.....||+.|+|||.+....++.++||||||+++|||++|+.||....... ....+... .+.. +.+..
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~-~~~~-----~~~~~ 227 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA----FRIMWAVH-NGTR-----PPLIK 227 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH----HHHHHHHH-TTCC-----CCCBT
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH----HHHHHHHh-cCCC-----CCccc
Confidence 123468999999999999999999999999999999999999986432221 11111111 1111 11111
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCCCCCCCce
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAF 727 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~~p~~p~~ 727 (760)
.. ...+.+++.+||+.||++|||+.+|+++|+.+.+..+.+..|..
T Consensus 228 ~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~~~ 273 (307)
T 2eva_A 228 NL----PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQ 273 (307)
T ss_dssp TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTSCCC
T ss_pred cc----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCCccc
Confidence 11 24577889999999999999999999999998776666555543
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=252.59 Aligned_cols=211 Identities=25% Similarity=0.368 Sum_probs=156.2
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ....+.|.+|+.++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 36799999999999999999995 468899999986432 23346799999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||+++++|.+++ +|||+++.+.... ...
T Consensus 90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 168 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS-LTQ 168 (294)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc-ccc
Confidence 9999999998763 3999987653222 122
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....||+.|+|||.+....++.++||||||+++|||++|+.||...... .......... .... ......
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~-~~~~-~~~~~~-- 238 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV------SIAIKHIQDS-VPNV-TTDVRK-- 238 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH------HHHHHHHSSC-CCCH-HHHSCT--
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhhcc-CCCc-chhccc--
Confidence 33457999999999999999999999999999999999999998643221 1111111111 1000 000111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCC-CHHHHHHHHhcccc
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRP-NMPTVVSMLNSEIK 717 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RP-t~~ev~~~L~~~~~ 717 (760)
.....+.+++.+|++.||++|| ++.++.+.|+....
T Consensus 239 --~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 239 --DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp --TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred --CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 1124677889999999999998 99999999988754
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-28 Score=280.80 Aligned_cols=213 Identities=29% Similarity=0.429 Sum_probs=163.8
Q ss_pred HHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 489 ELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 489 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++....++|++.++||+|+||.||+|.+..+..||||+++... ...++|.+|+++|++++|||||++++++.+ +..+|
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence 3444567899999999999999999999888889999997543 346789999999999999999999999876 67899
Q ss_pred EEeccCCCChhhhh----------------------------------------------------ccccceeEecCCCc
Q 004345 569 IYEYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 569 V~Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~ 596 (760)
||||+++|+|.++| +|||+++.+....
T Consensus 339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 417 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE- 417 (535)
T ss_dssp EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-
T ss_pred eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-
Confidence 99999999998763 3999998654221
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
........++..|+|||.+....++.++|||||||+||||++ |+.||...... .....+ ..+...
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~---~~~~~i----~~~~~~------- 483 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLDQV----ERGYRM------- 483 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH---HHHHHH----HTTCCC-------
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HcCCCC-------
Confidence 112223456789999999999999999999999999999999 89998643221 111111 111100
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
..+......+.+++.+||+.||++|||+.+|+++|+.......
T Consensus 484 --~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 484 --PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred --CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 0111123467789999999999999999999999998865443
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-28 Score=262.43 Aligned_cols=206 Identities=23% Similarity=0.378 Sum_probs=154.1
Q ss_pred cccccccccccCCceeEEEEEec-CCcE----EEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQE----IAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++|++.+.||+|+||.||+|+.. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57889999999999999999954 4443 8888876432 344567889999999999999999999986 567899
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||||+++|+|.+++ +|||+++.+......
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 171 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCccccc
Confidence 99999999997763 399999876544433
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......+|..|+|||.+....++.++||||||+++|||++ |+.||....... ..... ..+..... +
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~----~~~~~~~~--~--- 239 (325)
T 3kex_A 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPDLL----EKGERLAQ--P--- 239 (325)
T ss_dssp CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHHHH----HTTCBCCC--C---
T ss_pred ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHHHH----HcCCCCCC--C---
Confidence 33445678889999999999999999999999999999999 999986433221 11111 11110000 0
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
......+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus 240 ----~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 240 ----QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ----TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ----CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0011245678899999999999999999999988754
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=255.83 Aligned_cols=211 Identities=22% Similarity=0.313 Sum_probs=152.1
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.++|++.++||+|+||.||+|+..+++.||||++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 47899999999999999999999889999999997542 2334678999999999999999999999999999999999
Q ss_pred ccCCCChhhh---------------------------------------------------hccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~~ 600 (760)
|+++ +|.++ |+|||+++...... ...
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~ 176 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV--RSY 176 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC--C--
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc--ccc
Confidence 9985 55443 24999998764322 122
Q ss_pred ceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC---Ccccccc----
Q 004345 601 KRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN---NVIDLVD---- 672 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d---- 672 (760)
....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......... .......... ......+
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL---PKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHH---HHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHHCCCChHHhhhhhccchh
Confidence 33578999999999876 56899999999999999999999999754433221 1111111110 0000000
Q ss_pred --cc--ccCCCCH-----HHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 --PL--ISESGFK-----MEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 --~~--l~~~~~~-----~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.. ....... .....+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00 0000000 11246778999999999999999999987
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-28 Score=263.49 Aligned_cols=216 Identities=28% Similarity=0.407 Sum_probs=161.9
Q ss_pred HHHhccccccccccccCCceeEEEEEe------cCCcEEEEEEeccc-CccchHhHHHHHHHHhcC-CCCccceeeeEEE
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKA-SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCV 561 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~ 561 (760)
+....++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+.++.++ +||||+++++++.
T Consensus 40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 344568899999999999999999995 24568999999754 334567899999999999 8999999999999
Q ss_pred eCCeeEEEEeccCCCChhhhh-----------------------------------------------------------
Q 004345 562 EREENMLIYEYMPNKSLDSFL----------------------------------------------------------- 582 (760)
Q Consensus 562 ~~~~~~lV~Ey~~~gsL~~~L----------------------------------------------------------- 582 (760)
..+..++||||+++|+|.++|
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik 199 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA 199 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 999999999999999986432
Q ss_pred --------------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCc
Q 004345 583 --------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYH 647 (760)
Q Consensus 583 --------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~ 647 (760)
+|||+++.+.............+|+.|+|||.+....++.++||||||+++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 39999987654433333344678889999999999999999999999999999998 999986433
Q ss_pred ccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 648 EEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
... ... .....+.. ...+......+.+++.+||+.||.+|||+.+|++.|+......+
T Consensus 280 ~~~--~~~----~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 280 VDA--NFY----KLIQNGFK---------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp CSH--HHH----HHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred cHH--HHH----HHHhcCCC---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 221 111 11111100 00111123467788999999999999999999999998865443
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-28 Score=263.15 Aligned_cols=222 Identities=24% Similarity=0.353 Sum_probs=159.2
Q ss_pred cccccccccCCceeEEEEEec-----CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeC--CeeEE
Q 004345 497 FQLANKLGQGGFGPVYKGKLQ-----DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EENML 568 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~l 568 (760)
|++.++||+|+||.||++.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488999999999999998743 67899999997543 24456799999999999999999999999884 57899
Q ss_pred EEeccCCCChhhhh-------------------------------------------------ccccceeEecCCCcc-c
Q 004345 569 IYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQ-A 598 (760)
Q Consensus 569 V~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~-~ 598 (760)
||||+++|+|.+++ +|||+++........ .
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 192 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 192 (318)
T ss_dssp EECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEE
T ss_pred EEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccc
Confidence 99999999998763 399999887543322 2
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
......+|..|+|||.+....++.++||||||+++|||++|+.|+....... .....+...........+.++......
T Consensus 193 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (318)
T 3lxp_A 193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF-LELIGIAQGQMTVLRLTELLERGERLP 271 (318)
T ss_dssp C---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-HHHHCSCCHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh-hhhhcccccchhHHHHHHHHhcccCCC
Confidence 2334567888999999999899999999999999999999999975321110 000000000000000111111111111
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCC
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDL 719 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~ 719 (760)
.+......+.+++.+||+.||++|||+.|++++|+++.+..
T Consensus 272 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 272 RPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 12222356788999999999999999999999999875544
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-28 Score=255.84 Aligned_cols=208 Identities=28% Similarity=0.414 Sum_probs=162.3
Q ss_pred HhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
...++|++.+.||+|+||.||+|... +++.||||++... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 45678999999999999999999975 4788999999753 345678999999999999999999999999999999999
Q ss_pred eccCCCChhhhh----------------------------------------------------ccccceeEecCCCccc
Q 004345 571 EYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 571 Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||+++++|.+++ +|||+++....... .
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~ 167 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 167 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS-E
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc-c
Confidence 999999997763 39999876543322 2
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......+|+.|+|||.+....++.++||||||+++|||++ |+.|+...... .......... ..
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~---~~~~~~~~~~-------------~~ 231 (288)
T 3kfa_A 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYELLEKDY-------------RM 231 (288)
T ss_dssp EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHHHHTTC-------------CC
T ss_pred cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHhccC-------------CC
Confidence 2334567889999999999999999999999999999999 88888643322 1111111100 00
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
..+......+.+++.+|++.||++|||+.+++++|+....
T Consensus 232 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 1111122467788999999999999999999999988653
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-28 Score=253.87 Aligned_cols=212 Identities=31% Similarity=0.440 Sum_probs=162.2
Q ss_pred HHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
+....++|++.+.||+|+||.||+|...+++.||||++.... ...+.|.+|++++++++||||+++++++. .+..++|
T Consensus 8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 85 (279)
T 1qpc_A 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYII 85 (279)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred cccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEE
Confidence 334457899999999999999999998888899999997543 45678999999999999999999999986 4568999
Q ss_pred EeccCCCChhhhh----------------------------------------------------ccccceeEecCCCcc
Q 004345 570 YEYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 570 ~Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
|||+++++|.+++ +|||+++.......
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 164 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY- 164 (279)
T ss_dssp EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-
T ss_pred EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc-
Confidence 9999999998763 39999987653322
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......++..|+|||.+....++.++||||||+++|||++ |+.|+...... ...... ..+.. ....
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~~----~~~~~-----~~~~ 232 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP---EVIQNL----ERGYR-----MVRP 232 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHHHH----HTTCC-----CCCC
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH---HHHHHH----hcccC-----CCCc
Confidence 22223456889999999998899999999999999999999 88888643221 111111 11100 0011
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
. .....+.+++.+|++.||++|||+.+++++|++......
T Consensus 233 ~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 233 D----NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred c----cccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 1 112467788999999999999999999999998765443
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-28 Score=262.08 Aligned_cols=203 Identities=23% Similarity=0.353 Sum_probs=148.6
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCC--CccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQH--RNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H--~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.+.||+|+||.||++...+++.||||++.... ....+.+.+|+.++.+++| |||+++++++..++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 46799999999999999999998889999999987442 3345679999999999976 9999999999999999999
Q ss_pred EeccCCCChhhhh-------------------------------------------------ccccceeEecCCCccccc
Q 004345 570 YEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 570 ~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|| +.+++|.++| +|||+++.+.........
T Consensus 88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~ 166 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVK 166 (343)
T ss_dssp EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC---------
T ss_pred Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccccCcccccccC
Confidence 99 5677887653 499999876544333333
Q ss_pred ceeeeeccccCcccccc-----------CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccc
Q 004345 601 KRLVGTYGYMSPEYAME-----------GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVID 669 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~-----------~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (760)
....||+.|+|||++.. ..++.++|||||||++|||++|+.||...... ........
T Consensus 167 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~~~------- 234 (343)
T 3dbq_A 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAII------- 234 (343)
T ss_dssp ---CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHH-------
T ss_pred CCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-----HHHHHHHh-------
Confidence 45679999999999865 67899999999999999999999998632211 11111111
Q ss_pred cccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 670 LVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 670 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
++......+......+.+++.+||+.||++|||+.|+++.
T Consensus 235 --~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 235 --DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp --CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111111111112457788999999999999999999874
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-27 Score=254.65 Aligned_cols=211 Identities=17% Similarity=0.200 Sum_probs=159.6
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+.+++++ +||||+++++++..++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 36799999999999999999995 578999999986442 345789999999999 99999999999999999999999
Q ss_pred ccCCCChhhhh--------------------------------------------------------ccccceeEecCCC
Q 004345 572 YMPNKSLDSFL--------------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------------~DFGla~~~~~~~ 595 (760)
|+ +++|.+++ +|||+++.+....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 99 89987752 3999998764332
Q ss_pred ccc-----ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccc
Q 004345 596 DQA-----ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDL 670 (760)
Q Consensus 596 ~~~-----~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (760)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........................
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~--- 241 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI--- 241 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH---
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH---
Confidence 211 124568999999999999999999999999999999999999999754322211111111000000000
Q ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 671 VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 671 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
..+... ...+.+++..||+.||.+||++.+|++.|+++.+
T Consensus 242 --~~~~~~-----~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 242 --EVLCEN-----FPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp --HHHTTT-----CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred --HHHhcc-----ChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 000010 1267888999999999999999999999987654
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.5e-28 Score=250.86 Aligned_cols=205 Identities=26% Similarity=0.437 Sum_probs=159.4
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 46789999999999999999998888999999997543 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhh---------------------------------------------------ccccceeEecCCCcccccce
Q 004345 574 PNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 574 ~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
++++|.+++ +|||+++...... ......
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~ 164 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTG 164 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHSTTS
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccc-cccccc
Confidence 999998763 3899887653221 112223
Q ss_pred eeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 603 LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
..++..|+|||.+....++.++||||||+++|||++ |+.||...... .... .. ..+.. ... +.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~---~i-~~~~~-----~~~----~~ 228 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVE---DI-STGFR-----LYK----PR 228 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH---HH-HTTCC-----CCC----CT
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH---HHHH---HH-hcCCc-----CCC----Cc
Confidence 456788999999998999999999999999999999 89888643221 1111 11 11100 000 11
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.....+.+++.+||+.||++|||+.+++++|+++.
T Consensus 229 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11245778899999999999999999999998864
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-27 Score=255.28 Aligned_cols=198 Identities=23% Similarity=0.286 Sum_probs=155.2
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.+.||+|+||.||+++.. +++.||+|++++. .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367999999999999999999965 6899999999753 234567899999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||+++|+|..+| +|||+++...... ..
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~--~~ 161 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--AT 161 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT--CC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC--Cc
Confidence 9999999997653 4999998642221 22
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
....+||+.|+|||++....++.++|||||||++|||++|+.||...... .+.. .... +.. .+..
T Consensus 162 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~---~i~~-~~~------~~p~-- 226 (337)
T 1o6l_A 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFE---LILM-EEI------RFPR-- 226 (337)
T ss_dssp BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---HHHH-CCC------CCCT--
T ss_pred ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH---HHHH---HHHc-CCC------CCCC--
Confidence 34568999999999999999999999999999999999999998633211 1111 1111 100 0111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
.....+.+++.+||+.||++|| ++.||++
T Consensus 227 --~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 227 --TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp --TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 1124567888899999999999 8999876
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.3e-28 Score=257.75 Aligned_cols=199 Identities=23% Similarity=0.374 Sum_probs=149.1
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe------
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE------ 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~------ 565 (760)
.++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 367999999999999999999975 78999999997543 3456789999999999999999999999876542
Q ss_pred ---------------------------------------------------eEEEEeccCCCChhhhh------------
Q 004345 566 ---------------------------------------------------NMLIYEYMPNKSLDSFL------------ 582 (760)
Q Consensus 566 ---------------------------------------------------~~lV~Ey~~~gsL~~~L------------ 582 (760)
.++||||+++++|.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 79999999999997652
Q ss_pred -----------------------------------------ccccceeEecCCCcc----------cccceeeeeccccC
Q 004345 583 -----------------------------------------FDFGLARIFGGNQDQ----------AATKRLVGTYGYMS 611 (760)
Q Consensus 583 -----------------------------------------~DFGla~~~~~~~~~----------~~~~~~~gt~~y~a 611 (760)
+|||+++........ .......||+.|+|
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 399999987543211 12234579999999
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHH
Q 004345 612 PEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVG 691 (760)
Q Consensus 612 PE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~ 691 (760)
||.+....++.++|||||||++|||++|..|+.. .... ........... ........+.+++
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~----~~~~~~~~~~~---------~~~~~~~~~~~li 306 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----RVRI----ITDVRNLKFPL---------LFTQKYPQEHMMV 306 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHH----HHHHHTTCCCH---------HHHHHCHHHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHH----HHHhhccCCCc---------ccccCChhHHHHH
Confidence 9999999999999999999999999998766320 0000 01111111000 0112234567899
Q ss_pred HhcccCCcCCCCCHHHHHH
Q 004345 692 LLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 692 ~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+||+.||++|||+.|+++
T Consensus 307 ~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 307 QDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHCSSGGGSCCHHHHHH
T ss_pred HHHccCCCCcCCCHHHHhh
Confidence 9999999999999999986
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.3e-28 Score=250.38 Aligned_cols=201 Identities=27% Similarity=0.408 Sum_probs=145.8
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccC----ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS----GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~----~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.+.||+|+||.||+|... ++.||||++.... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357899999999999999999975 8899999987542 23356799999999999999999999999999999999
Q ss_pred EeccCCCChhhhh------------------------------------------------------------cccccee
Q 004345 570 YEYMPNKSLDSFL------------------------------------------------------------FDFGLAR 589 (760)
Q Consensus 570 ~Ey~~~gsL~~~L------------------------------------------------------------~DFGla~ 589 (760)
|||+++++|.+++ +|||+++
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp EECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred EEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 9999999987653 2667666
Q ss_pred EecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccc
Q 004345 590 IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVID 669 (760)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (760)
...... .....||+.|+|||.+....++.++||||||+++|||++|+.||...... ............
T Consensus 165 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~-- 232 (271)
T 3dtc_A 165 EWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL------AVAYGVAMNKLA-- 232 (271)
T ss_dssp ---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHTSCCC--
T ss_pred cccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHhhhcCCCC--
Confidence 443211 22356899999999999999999999999999999999999998643221 111111111100
Q ss_pred cccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 670 LVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 670 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
...+......+.+++.+||+.||++|||+.|++++|++
T Consensus 233 -------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 233 -------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred -------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 00111122467789999999999999999999999975
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-27 Score=257.61 Aligned_cols=201 Identities=22% Similarity=0.305 Sum_probs=155.6
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCcc------chHhHHHHHHHHhcCCCCccceeeeEEEeCCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQ------GQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~------~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 566 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++++.... ..+.+.+|+.++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467999999999999999999965 6899999999754321 356799999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhh------------------------------------------------------ccccceeEec
Q 004345 567 MLIYEYMPNKSLDSFL------------------------------------------------------FDFGLARIFG 592 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~ 592 (760)
++||||+++|+|.++| +|||+++.+.
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~ 170 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence 9999999999998763 3899998764
Q ss_pred CCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
... ......||+.|+|||++....++.++|||||||++|||++|..||...... ...... ..... . .+
T Consensus 171 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~---~~~~~i----~~~~~-~-~~ 238 (361)
T 2yab_A 171 DGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---ETLANI----TAVSY-D-FD 238 (361)
T ss_dssp TTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHHHH----HTTCC-C-CC
T ss_pred CCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH----HhcCC-C-CC
Confidence 332 223467999999999999999999999999999999999999998643221 111111 11100 0 00
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+..... ....+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~----~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 239 EEFFSQ----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhccC----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000011 1245678899999999999999999985
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.2e-28 Score=257.23 Aligned_cols=213 Identities=23% Similarity=0.331 Sum_probs=156.9
Q ss_pred cccccccccccCCceeEEEEEe-----cCCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeC--Cee
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-----QDGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EEN 566 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~ 566 (760)
++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+.++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588999999999999999983 46889999999754 334567899999999999999999999999877 668
Q ss_pred EEEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCC
Q 004345 567 MLIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~ 595 (760)
++||||+++++|.+++ +|||+++......
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 180 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence 9999999999998763 3999998875433
Q ss_pred cc-cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCccc--------ccccHHHHHHHhccCCC
Q 004345 596 DQ-AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEE--------FELTLLGYAWKLWNDNN 666 (760)
Q Consensus 596 ~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~--------~~~~~~~~~~~~~~~~~ 666 (760)
.. .......+|..|+|||.+....++.++||||||+++|||++|+.|+...... ...............+.
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (302)
T 4e5w_A 181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 260 (302)
T ss_dssp CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTC
T ss_pred cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccC
Confidence 22 2233456788899999999999999999999999999999999885321100 00000000011111110
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 667 VIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 667 ~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
....+......+.+++.+||+.||.+|||+.+++++|++++
T Consensus 261 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 261 ---------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11111222356788999999999999999999999998764
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-27 Score=253.14 Aligned_cols=200 Identities=21% Similarity=0.280 Sum_probs=154.6
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCc------cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG------QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~------~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++++......+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 56899999999999999999965 689999999975422 23577999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhh------------------------------------------------------ccccceeEecC
Q 004345 568 LIYEYMPNKSLDSFL------------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~ 593 (760)
+||||+++++|.++| +|||+++.+..
T Consensus 91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~ 170 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170 (326)
T ss_dssp EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCT
T ss_pred EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCC
Confidence 999999999998763 38999987643
Q ss_pred CCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
.. ......||+.|+|||++....++.++|||||||++|||++|+.||....... ........ .. ... .
T Consensus 171 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~~~~~--~~---~~~-~ 238 (326)
T 2y0a_A 171 GN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TLANVSAV--NY---EFE-D 238 (326)
T ss_dssp TS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHHHHHHT--CC---CCC-H
T ss_pred CC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---HHHHHHhc--CC---CcC-c
Confidence 22 1234579999999999999999999999999999999999999986432211 11111100 00 000 0
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..... ....+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~----~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 239 EYFSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccc----CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00001 1245678899999999999999999987
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.7e-27 Score=246.78 Aligned_cols=212 Identities=21% Similarity=0.307 Sum_probs=153.6
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhc--CCCCccceeeeEEEeC----CeeE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISN--LQHRNLVRLLGCCVER----EENM 567 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~--l~H~nIv~l~g~~~~~----~~~~ 567 (760)
.++|++.+.||+|+||.||+|+. +++.||||++... ..+.+.+|.+++.. ++||||+++++++... ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46899999999999999999987 5899999998643 45567777777766 7999999999997653 4579
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------------ccccceeE
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------------FDFGLARI 590 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------------~DFGla~~ 590 (760)
+||||+++|+|.++| +|||+++.
T Consensus 83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 162 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM 162 (301)
T ss_dssp EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeee
Confidence 999999999997652 39999987
Q ss_pred ecCCCccc--ccceeeeeccccCccccccC------CCCccchhHHHHHHHHHHHhC----------CCCCCCCcccccc
Q 004345 591 FGGNQDQA--ATKRLVGTYGYMSPEYAMEG------RFSEKSDVFSFGVLLLEIVSG----------RKNTSFYHEEFEL 652 (760)
Q Consensus 591 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~s~ksDVwSfGv~l~ElltG----------~~p~~~~~~~~~~ 652 (760)
........ ......||+.|+|||.+... .++.++|||||||++|||++| +.||........
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~- 241 (301)
T 3q4u_A 163 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP- 241 (301)
T ss_dssp EETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC-
T ss_pred cccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc-
Confidence 65433221 12334799999999999876 455799999999999999999 677643322211
Q ss_pred cHHHHHHHhccCCCcccccccccc-CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 653 TLLGYAWKLWNDNNVIDLVDPLIS-ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
.... .......... .+.+. ..........+.+++.+||+.||++|||+.||+++|+++
T Consensus 242 ~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 242 SFED-MRKVVCVDQQ----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CHHH-HHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred chhh-hhHHHhccCC----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1111 1111111110 11111 111234567888999999999999999999999999764
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-27 Score=249.93 Aligned_cols=211 Identities=24% Similarity=0.382 Sum_probs=148.1
Q ss_pred hccccccccccccCCceeEEEEEecCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
..++|++.++||+|+||.||+|+.. ..||||+++... ....+.|.+|+.++++++||||+++++++ .....++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3467999999999999999999864 469999997543 33456799999999999999999999965 556789999
Q ss_pred eccCCCChhhhh---------------------------------------------------ccccceeEecCCCcccc
Q 004345 571 EYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 571 Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
||+++++|.+++ +|||+++..........
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 999999997653 39999986543322233
Q ss_pred cceeeeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 600 TKRLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.....||+.|+|||.+. ...++.++||||||+++|||++|+.||....... .+..... .+........
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~----~~~~~~~~~~--- 249 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD--QIIEMVG----RGSLSPDLSK--- 249 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH--HHHHHHH----HTSCCCCTTS---
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH--HHHHHhc----ccccCcchhh---
Confidence 34467899999999986 6678999999999999999999999986433221 1111111 1111111100
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
........+.+++.+||+.||++|||+.+++++|+++.+
T Consensus 250 --~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 250 --VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp --SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred --ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 011123567889999999999999999999999988754
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.4e-28 Score=265.31 Aligned_cols=202 Identities=22% Similarity=0.345 Sum_probs=149.4
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccC--ccchHhHHHHHHHHhcCC--CCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQ--HRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~--H~nIv~l~g~~~~~~~~~lV~ 570 (760)
.+|++.+.||+|+||.||++...+++.||||++.... ....+.+.+|+.+|.+++ ||||+++++++..++..+|||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 5699999999999999999998889999999986542 334578999999999996 599999999999999999999
Q ss_pred eccCCCChhhhh-------------------------------------------------ccccceeEecCCCcccccc
Q 004345 571 EYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 571 Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
| +.+++|.++| +|||+++.+..........
T Consensus 136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~ 214 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD 214 (390)
T ss_dssp E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------C
T ss_pred e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccCC
Confidence 9 5678887653 4999998765433333334
Q ss_pred eeeeeccccCcccccc-----------CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccc
Q 004345 602 RLVGTYGYMSPEYAME-----------GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDL 670 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~-----------~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (760)
..+||+.|+|||++.. ..++.++|||||||++|||++|+.||...... ...........
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-----~~~~~~~~~~~----- 284 (390)
T 2zmd_A 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAIIDPN----- 284 (390)
T ss_dssp CSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-----HHHHHHHHCTT-----
T ss_pred CCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-----HHHHHHHhCcc-----
Confidence 5679999999999865 46899999999999999999999998632211 11111111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 671 VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 671 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.....+......+.+++.+||+.||++|||+.||++.
T Consensus 285 ----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 285 ----HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ----SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111111112457788899999999999999999863
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-27 Score=251.37 Aligned_cols=206 Identities=23% Similarity=0.345 Sum_probs=146.8
Q ss_pred hccccccccccccCCceeEEEEEecC----CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQD----GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
..++|++.+.||+|+||.||+|.... +..||+|++.... ....+.|.+|+.++++++||||+++++++ .++..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccE
Confidence 34689999999999999999998642 4579999987543 33456799999999999999999999998 456789
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCc
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+||||+++++|.++| +|||+++.......
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 999999999998763 39999987643322
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
. ......+|+.|+|||.+....++.++||||||+++|||++ |+.||...... ....... .+... .+
T Consensus 172 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~---~~~~~i~----~~~~~-----~~ 238 (281)
T 1mp8_A 172 Y-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGRIE----NGERL-----PM 238 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHHHHH----TTCCC-----CC
T ss_pred c-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH---HHHHHHH----cCCCC-----CC
Confidence 1 2223456789999999999999999999999999999997 89898643322 1111111 11100 01
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.. .....+.+++.+||+.||++|||+.|+++.|++++
T Consensus 239 ~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 239 PP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp CT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11 12245778899999999999999999999998865
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-27 Score=251.93 Aligned_cols=200 Identities=22% Similarity=0.304 Sum_probs=146.8
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc--------------------------cchHhHHHHHHHHh
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG--------------------------QGQEEFMNEVMVIS 546 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--------------------------~~~~~f~~E~~~l~ 546 (760)
.++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46899999999999999999996 4688999999864321 12357899999999
Q ss_pred cCCCCccceeeeEEEe--CCeeEEEEeccCCCChhhh-------------------------------------------
Q 004345 547 NLQHRNLVRLLGCCVE--REENMLIYEYMPNKSLDSF------------------------------------------- 581 (760)
Q Consensus 547 ~l~H~nIv~l~g~~~~--~~~~~lV~Ey~~~gsL~~~------------------------------------------- 581 (760)
+++||||+++++++.+ ....++||||+++++|.++
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~ 171 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG 171 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC
Confidence 9999999999999987 5678999999999988764
Q ss_pred ------hccccceeEecCCCcccccceeeeeccccCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCCCcccccc
Q 004345 582 ------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR---FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFEL 652 (760)
Q Consensus 582 ------L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~ 652 (760)
|+|||+++.+..... ......||+.|+|||.+.... ++.++|||||||++|||++|+.||......
T Consensus 172 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--- 246 (298)
T 2zv2_A 172 EDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM--- 246 (298)
T ss_dssp TTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH---
T ss_pred CCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH---
Confidence 249999987653322 223457999999999997665 478899999999999999999998632211
Q ss_pred cHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 653 TLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+.... ..... .. +. .. .....+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~----~~~~~-~~--~~-~~----~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 247 CLHSKI----KSQAL-EF--PD-QP----DIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHH----HHCCC-CC--CS-SS----CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHH----hcccC-CC--CC-cc----ccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 111111 11100 00 00 01 11245778899999999999999999865
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-27 Score=258.81 Aligned_cols=202 Identities=19% Similarity=0.257 Sum_probs=157.9
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.++|++.+.||+|+||.||+|... +++.||+|++..........+.+|+.++++++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999999999964 6889999999765555566899999999999999999999999999999999999
Q ss_pred cCCCChhhhh-----------------------------------------------------ccccceeEecCCCcccc
Q 004345 573 MPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 573 ~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
+++|+|.++| +|||+++.+.... .
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~---~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---I 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS---C
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc---c
Confidence 9999997753 3999998764332 2
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....||+.|+|||++....++.++|||||||++|||++|+.||...... ........ ... . .++. .
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~---~~~~~i~~----~~~-~-~~~~----~ 273 (387)
T 1kob_A 207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL---ETLQNVKR----CDW-E-FDED----A 273 (387)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHHHHHH----CCC-C-CCSS----T
T ss_pred eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH---HHHHHHHh----CCC-C-CCcc----c
Confidence 23457999999999999999999999999999999999999998643221 11111111 000 0 0000 0
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 274 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 11112457789999999999999999999873
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.3e-28 Score=256.90 Aligned_cols=218 Identities=25% Similarity=0.416 Sum_probs=152.7
Q ss_pred HHHHHHhccccccccccccCCceeEEEEEec----CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEE
Q 004345 487 FEELANATNNFQLANKLGQGGFGPVYKGKLQ----DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCC 560 (760)
Q Consensus 487 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~ 560 (760)
++++....++|.+.+.||+|+||.||+|... .++.||||+++... ....+.+.+|+.++++++||||+++++++
T Consensus 26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 105 (313)
T 3brb_A 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVC 105 (313)
T ss_dssp TTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred HHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence 3444556688999999999999999999854 34589999987542 23456799999999999999999999999
Q ss_pred EeCCe-----eEEEEeccCCCChhhhh-----------------------------------------------------
Q 004345 561 VEREE-----NMLIYEYMPNKSLDSFL----------------------------------------------------- 582 (760)
Q Consensus 561 ~~~~~-----~~lV~Ey~~~gsL~~~L----------------------------------------------------- 582 (760)
.+... .++||||+++++|.++|
T Consensus 106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSC
T ss_pred eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCc
Confidence 87653 49999999999997653
Q ss_pred ---ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHH
Q 004345 583 ---FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYA 658 (760)
Q Consensus 583 ---~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~ 658 (760)
+|||+++.+.............+++.|+|||.+....++.++||||||+++|||++ |+.|+...... ......
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~~ 262 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH---EMYDYL 262 (313)
T ss_dssp EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHHH
T ss_pred EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH---HHHHHH
Confidence 39999987644332223334567889999999999999999999999999999999 88888643322 111111
Q ss_pred HHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 659 WKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 659 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
. .+... .. +......+.+++.+||+.||++|||+.++++.|+++.+.+|
T Consensus 263 ~----~~~~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 263 L----HGHRL-----KQ----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp H----TTCCC-----CC----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred H----cCCCC-----CC----CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1 11100 01 11122467788999999999999999999999999876655
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-27 Score=251.59 Aligned_cols=215 Identities=26% Similarity=0.400 Sum_probs=162.1
Q ss_pred cccccccc-ccccCCceeEEEEEec---CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 494 TNNFQLAN-KLGQGGFGPVYKGKLQ---DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 494 ~~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
.++|.+.+ .||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 35666766 9999999999999853 57789999997643 34467899999999999999999999999 5667899
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||||+++++|.+++ +|||+++........
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 99999999998763 399999877543322
Q ss_pred -cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 598 -AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 598 -~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
.......+|+.|+|||.+....++.++||||||+++|||++ |+.||...... ...... ..+... .
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~i----~~~~~~-----~- 233 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMAFI----EQGKRM-----E- 233 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHHHH----HTTCCC-----C-
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHH----hcCCcC-----C-
Confidence 12223456889999999998889999999999999999999 99998643321 111111 111110 1
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCCCCCCC
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQP 725 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~~p~~p 725 (760)
.+......+.+++..||+.||++||++.++++.|+++..+...+..+
T Consensus 234 ---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~ 280 (287)
T 1u59_A 234 ---CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG 280 (287)
T ss_dssp ---CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSS
T ss_pred ---CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccC
Confidence 11112346778899999999999999999999999886554444333
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-27 Score=255.88 Aligned_cols=207 Identities=24% Similarity=0.406 Sum_probs=150.0
Q ss_pred ccccccccccccCCceeEEEEEec-CCcE----EEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQE----IAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
.++|++.+.||+|+||.||+|... +++. ||+|.+... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 367999999999999999999953 4443 577877543 3455678999999999999999999999998754 78
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCc
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+|+||+++|+|.+++ +|||+++.+.....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~ 172 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence 999999999998763 39999987654433
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....... +..... .+..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~~~----~~~~-------- 237 (327)
T 3lzb_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE----KGER-------- 237 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHH----TTCC--------
T ss_pred cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHHHH----cCCC--------
Confidence 333334567889999999999999999999999999999999 999986433221 111111 1110
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
...+......+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 238 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 238 -LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred -CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 00111122457788999999999999999999999988754
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-27 Score=257.79 Aligned_cols=200 Identities=22% Similarity=0.265 Sum_probs=154.2
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc-----CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA-----SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 57999999999999999999864 6899999998642 12246789999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh---------------------------------------------------------ccccceeEe
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------------~DFGla~~~ 591 (760)
||||+++++|.++| +|||+++..
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 99999999996532 399999876
Q ss_pred cCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccc
Q 004345 592 GGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (760)
..... ......||+.|+|||++....++.++|||||||++|||++|+.||..... .+.... ..+... .
T Consensus 184 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~i----~~~~~~--~ 251 (351)
T 3c0i_A 184 GESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----RLFEGI----IKGKYK--M 251 (351)
T ss_dssp CTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH----HHHHHH----HHTCCC--C
T ss_pred cCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH----HHHHHH----HcCCCC--C
Confidence 53321 22345799999999999999999999999999999999999999864211 111111 011100 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
++..... ....+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 252 NPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Ccccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000001 1245778899999999999999999986
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6e-27 Score=247.67 Aligned_cols=215 Identities=15% Similarity=0.233 Sum_probs=163.5
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.++|++.+.||+|+||.||+|+. .+++.||||++... ...+.+.+|+.++.++ +|+||+++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 35799999999999999999995 57899999998643 3445788999999999 79999999999999999999999
Q ss_pred ccCCCChhhhh--------------------------------------------------------ccccceeEecCCC
Q 004345 572 YMPNKSLDSFL--------------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------------~DFGla~~~~~~~ 595 (760)
|+ +++|.+++ +|||+++......
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 99 99998763 3899998765432
Q ss_pred cc-----cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccc
Q 004345 596 DQ-----AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDL 670 (760)
Q Consensus 596 ~~-----~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (760)
.. .......||+.|+|||.+....++.++||||||+++|||++|+.||.........................+
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~- 244 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE- 244 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH-
T ss_pred ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHH-
Confidence 21 123446799999999999999999999999999999999999999975432222111111111100001000
Q ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 671 VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 671 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
+... ....+.+++.+||+.||++||++.+|++.|+++.+...
T Consensus 245 ----~~~~----~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 245 ----LCAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp ----HTTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ----HHhh----CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 0111 12467788999999999999999999999998865443
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=9.8e-28 Score=255.97 Aligned_cols=218 Identities=25% Similarity=0.394 Sum_probs=165.9
Q ss_pred ccCHHHHHHhccccccccccccCCceeEEEEEe------cCCcEEEEEEecccCc-cchHhHHHHHHHHhcC-CCCccce
Q 004345 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKASG-QGQEEFMNEVMVISNL-QHRNLVR 555 (760)
Q Consensus 484 ~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l-~H~nIv~ 555 (760)
.+...++....++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.++.++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 356667777789999999999999999999984 3567899999975432 3456799999999999 7999999
Q ss_pred eeeEEEeCC-eeEEEEeccCCCChhhhh----------------------------------------------------
Q 004345 556 LLGCCVERE-ENMLIYEYMPNKSLDSFL---------------------------------------------------- 582 (760)
Q Consensus 556 l~g~~~~~~-~~~lV~Ey~~~gsL~~~L---------------------------------------------------- 582 (760)
+++++...+ ..++||||+++|+|.++|
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dik 175 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 175 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCc
Confidence 999988755 489999999999886542
Q ss_pred --------------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCc
Q 004345 583 --------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYH 647 (760)
Q Consensus 583 --------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~ 647 (760)
+|||+++.+.............+|+.|+|||.+....++.++||||||+++|||++ |+.||....
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 255 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence 39999887644433333344678899999999999999999999999999999998 999986433
Q ss_pred ccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 648 EEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
... .+.. ....+.... ... .....+.+++.+||+.||.+|||+.||++.|++++
T Consensus 256 ~~~--~~~~----~~~~~~~~~-----~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 256 IDE--EFCR----RLKEGTRMR-----APD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp CSH--HHHH----HHHHTCCCC-----CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhH--HHHH----HhccCccCC-----CCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 221 1111 111111000 111 11245778889999999999999999999998875
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-27 Score=264.06 Aligned_cols=202 Identities=23% Similarity=0.301 Sum_probs=154.0
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
.++|++.+.||+|+||.||+|.. .+++.+|+|++.... ....+.+.+|+.++++++|||||++++++.+++..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 46799999999999999999985 478999999987543 234567899999999999999999999999999999999
Q ss_pred eccCCCChhhhh-----------------------------------------------------ccccceeEecCCCcc
Q 004345 571 EYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 571 Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||+++|+|.++| +|||+++......
T Consensus 90 E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~-- 167 (444)
T 3soa_A 90 DLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-- 167 (444)
T ss_dssp CCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC--
T ss_pred EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC--
Confidence 999999997652 3999998764332
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
.......||+.|+|||++....++.++||||+||++|||++|+.||...... .+.... ..+.. ....+..
T Consensus 168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~---~~~~~i----~~~~~-~~~~~~~-- 237 (444)
T 3soa_A 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH---RLYQQI----KAGAY-DFPSPEW-- 237 (444)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHH----HHTCC-CCCTTTT--
T ss_pred ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH---HHHHHH----HhCCC-CCCcccc--
Confidence 2223467999999999999999999999999999999999999998633221 111111 11110 0000000
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......+.+++.+||+.||++|||+.|+++
T Consensus 238 ---~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 238 ---DTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp ---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---ccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 111245778889999999999999999987
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-27 Score=252.99 Aligned_cols=200 Identities=19% Similarity=0.264 Sum_probs=155.5
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.++|++.+.||+|+||.||+|+.. +++.+|+|.+... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999999965 6789999998643 33456789999999999999999999999999999999999
Q ss_pred cCCCChhhhh-----------------------------------------------------ccccceeEecCCCcccc
Q 004345 573 MPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 573 ~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
+++|+|.+++ +|||+++.+.... .
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~---~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---N 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC---E
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC---c
Confidence 9999997763 3999998764332 2
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....||+.|+|||++....++.++|||||||++|||++|+.||...... ........ +... .++.....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~~----~~~~--~~~~~~~~- 229 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ---QIIENIMN----AEYT--FDEEAFKE- 229 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHHHH----TCCC--CCHHHHTT-
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH---HHHHHHHc----CCCC--CChhhhcc-
Confidence 23467899999999999888999999999999999999999998643221 11111111 0000 00000001
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+.+++.+||+.||++|||+.|+++
T Consensus 230 ---~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 230 ---ISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp ---SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1245778999999999999999999998
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=246.39 Aligned_cols=211 Identities=18% Similarity=0.187 Sum_probs=149.9
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999964 688999999975422 2346799999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||+++++|.+++ +|||+++...... ...
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~ 191 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK-LTQ 191 (309)
T ss_dssp EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC------------
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc-ccc
Confidence 9999999998763 3999987654322 122
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC-CccccccccccCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN-NVIDLVDPLISES 678 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~l~~~ 678 (760)
.....|++.|+|||.+....++.++||||||+++|||++|+.||...... ......... ...... ..
T Consensus 192 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~----~~- 259 (309)
T 2h34_A 192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-------VMGAHINQAIPRPSTV----RP- 259 (309)
T ss_dssp -----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-------HHHHHHHSCCCCGGGT----ST-
T ss_pred ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-------HHHHHhccCCCCcccc----CC-
Confidence 23457899999999999999999999999999999999999998632211 111111111 000001 11
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCC-CHHHHHHHHhccccCCC
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRP-NMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RP-t~~ev~~~L~~~~~~~~ 720 (760)
.....+.+++.+||+.||++|| ++.++++.|++.+....
T Consensus 260 ---~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 260 ---GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp ---TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred ---CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 1123567788999999999999 99999999998865443
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.9e-27 Score=257.11 Aligned_cols=197 Identities=24% Similarity=0.267 Sum_probs=147.9
Q ss_pred ccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCCC
Q 004345 498 QLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 498 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
...+.||+|+||.||+|+. .+++.||||+++.......+.|.+|++++++++||||+++++++.+.+..+|||||++++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 3357899999999999996 468999999998665556778999999999999999999999999999999999999999
Q ss_pred Chhhhh-----------------------------------------------------ccccceeEecCCCccccccee
Q 004345 577 SLDSFL-----------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 577 sL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
+|.++| +|||+++.+..... ....
T Consensus 172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~~~ 248 (373)
T 2x4f_A 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LKVN 248 (373)
T ss_dssp EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CCCC
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---cccc
Confidence 997642 39999987653322 2235
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
.||+.|+|||++....++.++|||||||++|||++|+.||....... ....... ... ...+... . ..
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~~~i~~---~~~--~~~~~~~-~----~~ 315 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE---TLNNILA---CRW--DLEDEEF-Q----DI 315 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHHHH---TCC--CSCSGGG-T----TS
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHh---ccC--CCChhhh-c----cC
Confidence 69999999999998899999999999999999999999986432211 1111111 000 0000000 1 11
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.+++.+||+.||++|||+.|+++
T Consensus 316 ~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 316 SEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 246778899999999999999999987
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-27 Score=256.95 Aligned_cols=202 Identities=22% Similarity=0.304 Sum_probs=155.4
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999964 68999999997542 234567899999999999999999999999999999999
Q ss_pred eccCCCChhhhh-----------------------------------------------------ccccceeEecCCCcc
Q 004345 571 EYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 571 Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||+++|+|.++| +|||+++......
T Consensus 108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~-- 185 (362)
T 2bdw_A 108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-- 185 (362)
T ss_dssp CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC--
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc--
Confidence 999999997652 3999988764322
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......||+.|+|||++....++.++|||||||++|||++|+.||...... .+..... .+.. ....+..
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~---~~~~~i~----~~~~-~~~~~~~-- 254 (362)
T 2bdw_A 186 -AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYAQIK----AGAY-DYPSPEW-- 254 (362)
T ss_dssp -SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH----HTCC-CCCTTGG--
T ss_pred -ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHH----hCCC-CCCcccc--
Confidence 223467999999999999999999999999999999999999998633211 1111111 1110 0000000
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
......+.+++.+||+.||++|||+.|+++.
T Consensus 255 ---~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 255 ---DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ---GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ---cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0112457788999999999999999998863
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.5e-27 Score=253.02 Aligned_cols=208 Identities=21% Similarity=0.245 Sum_probs=154.0
Q ss_pred HHHhccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc-----CccchHhHHHHHHHHhcCCCCccceeeeEEEeC
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA-----SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER 563 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~ 563 (760)
+....++|++.+.||+|+||.||+|.. .+++.||+|++... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 445567899999999999999999996 46789999998643 235567899999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhh-------------------------------------------------------------
Q 004345 564 EENMLIYEYMPNKSLDSFL------------------------------------------------------------- 582 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L------------------------------------------------------------- 582 (760)
+..++||||+++|+|.++|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999985422
Q ss_pred -------------------------------ccccceeEecCCCc--ccccceeeeeccccCcccccc--CCCCccchhH
Q 004345 583 -------------------------------FDFGLARIFGGNQD--QAATKRLVGTYGYMSPEYAME--GRFSEKSDVF 627 (760)
Q Consensus 583 -------------------------------~DFGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVw 627 (760)
+|||+++.+..... ........||+.|+|||.+.. ..++.++|||
T Consensus 181 l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw 260 (345)
T 3hko_A 181 LHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW 260 (345)
T ss_dssp HHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHH
T ss_pred HHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHH
Confidence 38999987643221 112334679999999999975 6789999999
Q ss_pred HHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHH
Q 004345 628 SFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPT 707 (760)
Q Consensus 628 SfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~e 707 (760)
||||++|||++|+.||....... ........... ...+.. ......+.+++.+||+.||.+|||+.|
T Consensus 261 slG~il~el~~g~~pf~~~~~~~------~~~~~~~~~~~--~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ 327 (345)
T 3hko_A 261 SAGVLLHLLLMGAVPFPGVNDAD------TISQVLNKKLC--FENPNY-----NVLSPLARDLLSNLLNRNVDERFDAMR 327 (345)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCC--TTSGGG-----GGSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred HHHHHHHHHHHCCCCCCCCChHH------HHHHHHhcccc--cCCccc-----ccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence 99999999999999986433221 11111111100 000100 011245778899999999999999999
Q ss_pred HHH
Q 004345 708 VVS 710 (760)
Q Consensus 708 v~~ 710 (760)
+++
T Consensus 328 ~l~ 330 (345)
T 3hko_A 328 ALQ 330 (345)
T ss_dssp HHH
T ss_pred Hhc
Confidence 987
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-27 Score=249.14 Aligned_cols=210 Identities=23% Similarity=0.339 Sum_probs=149.0
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.+.||+|+||.||+|+..+++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5799999999999999999999889999999996442 23456789999999999999999999999999999999999
Q ss_pred cCCCChhhh---------------------------------------------------hccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
+++ +|.++ |+|||+++...... ....
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 158 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--RKYT 158 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--cccc
Confidence 985 66543 24999987653221 1223
Q ss_pred eeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC---C---cc--cccc
Q 004345 602 RLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN---N---VI--DLVD 672 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~---~~--~~~d 672 (760)
...||+.|+|||.+... .++.++|||||||++|||++|+.||....... ............ . .. ...+
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD---QLMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHHCCCChhhchhhhcccccc
Confidence 35789999999999764 58999999999999999999999986433221 111111111100 0 00 0011
Q ss_pred cccc-------CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 PLIS-------ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ~~l~-------~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+... ..........+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1000 0000112245778999999999999999999976
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-27 Score=264.15 Aligned_cols=213 Identities=20% Similarity=0.232 Sum_probs=159.4
Q ss_pred cCHHHHHHhccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEE
Q 004345 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCC 560 (760)
Q Consensus 485 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~ 560 (760)
+.+.++....++|++.++||+|+||.||+|+.. +++.||||++++. .....+.+.+|+.++.+++||||+++++++
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 345666777899999999999999999999975 5789999999753 223345689999999999999999999999
Q ss_pred EeCCeeEEEEeccCCCChhhhh---------------------------------------------------cccccee
Q 004345 561 VEREENMLIYEYMPNKSLDSFL---------------------------------------------------FDFGLAR 589 (760)
Q Consensus 561 ~~~~~~~lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~ 589 (760)
.+.+..+||||||++|+|.++| +|||+++
T Consensus 144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~ 223 (437)
T 4aw2_A 144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCL 223 (437)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred eeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhh
Confidence 9999999999999999998763 4999998
Q ss_pred EecCCCcccccceeeeeccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC
Q 004345 590 IFGGNQDQAATKRLVGTYGYMSPEYAM-----EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND 664 (760)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 664 (760)
.+..... ......+||+.|||||++. ...++.++|||||||++|||++|+.||......+ ..... ...
T Consensus 224 ~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~---~~~~i---~~~ 296 (437)
T 4aw2_A 224 KLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE---TYGKI---MNH 296 (437)
T ss_dssp ECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHH---HTH
T ss_pred hcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH---HHHhh---hhc
Confidence 7643322 2223468999999999997 5679999999999999999999999996432211 11111 100
Q ss_pred CCccccccccccCCCCHHHHHHHHHHHHhcccCCcCC--CCCHHHHHH
Q 004345 665 NNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKD--RPNMPTVVS 710 (760)
Q Consensus 665 ~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPt~~ev~~ 710 (760)
.. ...-+..... ....+.+++.+|+..+|++ ||++.|+++
T Consensus 297 ~~--~~~~p~~~~~----~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 297 KE--RFQFPTQVTD----VSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HH--HCCCCSSCCC----SCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred cc--cccCCccccc----CCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 00 0000000001 1235667888888888888 999999987
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.8e-28 Score=259.03 Aligned_cols=213 Identities=27% Similarity=0.367 Sum_probs=162.1
Q ss_pred HHHHhccccccccccccCCceeEEEEEecC------CcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEE
Q 004345 489 ELANATNNFQLANKLGQGGFGPVYKGKLQD------GQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCC 560 (760)
Q Consensus 489 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~ 560 (760)
++....++|++.+.||+|+||.||+|.... .+.||+|.+.... ....+.+.+|+.+++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 344556889999999999999999999542 2479999997543 23456799999999999 899999999999
Q ss_pred EeCCeeEEEEeccCCCChhhhh----------------------------------------------------------
Q 004345 561 VEREENMLIYEYMPNKSLDSFL---------------------------------------------------------- 582 (760)
Q Consensus 561 ~~~~~~~lV~Ey~~~gsL~~~L---------------------------------------------------------- 582 (760)
...+..++||||+++|+|.++|
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 199 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEG
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECC
Confidence 9999999999999999986542
Q ss_pred ------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHH
Q 004345 583 ------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLL 655 (760)
Q Consensus 583 ------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~ 655 (760)
+|||+++...............+|+.|+|||.+....++.++||||||+++|||++ |..||....... ...
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~ 277 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--KFY 277 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--HHH
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--HHH
Confidence 39999986644333333344567889999999999999999999999999999999 888886432221 111
Q ss_pred HHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 656 GYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 656 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
..... +.. .. .+......+.+++.+||+.||.+|||+.||+++|++..
T Consensus 278 ~~~~~----~~~-----~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 278 KLVKD----GYQ-----MA----QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp HHHHH----TCC-----CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhc----CCC-----CC----CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 11111 100 00 01111245778899999999999999999999998764
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-27 Score=247.15 Aligned_cols=212 Identities=20% Similarity=0.265 Sum_probs=151.5
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|++.++||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999964 68899999997543 2334678999999999999999999999999999999999
Q ss_pred ccCCCChhhh--------------------------------------------------hccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
|++++.+..+ |+|||+++...... ....
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 159 (292)
T 3o0g_A 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--RCYS 159 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--SCCC
T ss_pred cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--cccc
Confidence 9986433221 24999998764322 2223
Q ss_pred eeeeeccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC---CCc---cccccc-
Q 004345 602 RLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND---NNV---IDLVDP- 673 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~d~- 673 (760)
...||+.|+|||.+.+.. ++.++|||||||++|||++|..|+...... ............. ... .+..+.
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T 3o0g_A 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV--DDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH--HHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH--HHHHHHHHHHhCCCChhhhhhhccccccc
Confidence 457899999999998766 899999999999999999998886432221 1111111111111 000 000000
Q ss_pred --------cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 674 --------LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 674 --------~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.............+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000011122356678999999999999999999987
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-27 Score=251.22 Aligned_cols=209 Identities=22% Similarity=0.317 Sum_probs=146.7
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCCe----
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE---- 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~---- 565 (760)
.++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.|.+|+.++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 36799999999999999999995 5789999999975432 234578999999999999999999999876554
Q ss_pred eEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCC
Q 004345 566 NMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~ 595 (760)
.++||||+++++|.+++ +|||+++.+....
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 170 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-------
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccc
Confidence 39999999999998763 3999998764332
Q ss_pred cc-cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 596 DQ-AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 596 ~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
.. .......||+.|+|||.+....++.++||||||+++|||++|+.||...... ............. +.
T Consensus 171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~~~~----~~ 240 (311)
T 3ork_A 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV------SVAYQHVREDPIP----PS 240 (311)
T ss_dssp -----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHCCCCC----HH
T ss_pred cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhcCCCCC----cc
Confidence 21 2233457899999999999999999999999999999999999998643221 1111111111100 00
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH-HHhcc
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS-MLNSE 715 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~-~L~~~ 715 (760)
.... .....+.+++.+||+.||++||++.++++ .|...
T Consensus 241 ~~~~---~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 241 ARHE---GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp HHST---TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cccC---CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0000 01245778899999999999997666554 55554
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-27 Score=256.52 Aligned_cols=209 Identities=24% Similarity=0.382 Sum_probs=160.7
Q ss_pred hccccccccccccCCceeEEEEEec--------CCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEe
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ--------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~ 562 (760)
..++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+.+++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 4578999999999999999999853 46789999997543 33456799999999999 89999999999999
Q ss_pred CCeeEEEEeccCCCChhhhh------------------------------------------------------------
Q 004345 563 REENMLIYEYMPNKSLDSFL------------------------------------------------------------ 582 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~L------------------------------------------------------------ 582 (760)
.+..++||||+++|+|.++|
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~ 192 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE 192 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcC
Confidence 99999999999999986542
Q ss_pred ------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHH
Q 004345 583 ------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLL 655 (760)
Q Consensus 583 ------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~ 655 (760)
+|||+++...............+|+.|+|||.+....++.++||||||+++|||++ |+.|+...... .+.
T Consensus 193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~ 269 (334)
T 2pvf_A 193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---ELF 269 (334)
T ss_dssp TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHH
T ss_pred CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH---HHH
Confidence 39999987754433333334567889999999998899999999999999999999 99998643221 111
Q ss_pred HHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 656 GYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 656 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
.... .+... .... .....+.+++.+||+.||.+|||+.||++.|+++..
T Consensus 270 ~~~~----~~~~~-----~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 270 KLLK----EGHRM-----DKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp HHHH----HTCCC-----CCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHh----cCCCC-----CCCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1111 11100 0111 122457788999999999999999999999998764
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-27 Score=250.92 Aligned_cols=207 Identities=24% Similarity=0.371 Sum_probs=139.7
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.++|++.+.||+|+||.||+|... +++.||||+++... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467899999999999999999964 68999999997543 3345789999999999999999999999999999999999
Q ss_pred ccCCCChhhhh--------------------------------------------------------ccccceeEecCCC
Q 004345 572 YMPNKSLDSFL--------------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------------~DFGla~~~~~~~ 595 (760)
|++ |+|.+++ +|||+++.+....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 162 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence 998 5765542 4999998764322
Q ss_pred cccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC--CC------
Q 004345 596 DQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND--NN------ 666 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~------ 666 (760)
. ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......... ......... ..
T Consensus 163 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 163 N--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL---KLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp C--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCSCCTTTCGGGG
T ss_pred c--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCCChhHhhhhh
Confidence 1 2234578999999999976 46899999999999999999999999754332211 111111100 00
Q ss_pred ----------------ccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 667 ----------------VIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 667 ----------------~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+.+.+.+..... ....+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEP----LDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSC----CCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhcccccccccchhHHHhhccccccc----CCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000001111111 1246788999999999999999999876
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.5e-27 Score=248.28 Aligned_cols=202 Identities=31% Similarity=0.494 Sum_probs=150.1
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccc-------hHhHHHHHHHHhcCCCCccceeeeEEEeCCe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQG-------QEEFMNEVMVISNLQHRNLVRLLGCCVEREE 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~-------~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~ 565 (760)
.++|++.+.||+|+||.||+|+. .+++.||||++....... .+.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 36799999999999999999996 478999999986433221 267999999999999999999999986554
Q ss_pred eEEEEeccCCCChhhhh----------------------------------------------------------ccccc
Q 004345 566 NMLIYEYMPNKSLDSFL----------------------------------------------------------FDFGL 587 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L----------------------------------------------------------~DFGl 587 (760)
++||||+++|+|.+++ +|||+
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 7999999999996653 26776
Q ss_pred eeEecCCCcccccceeeeeccccCccccc--cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC
Q 004345 588 ARIFGGNQDQAATKRLVGTYGYMSPEYAM--EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN 665 (760)
Q Consensus 588 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (760)
++.... ......||+.|+|||.+. ...++.++||||||+++|||++|+.||........ ........ .+
T Consensus 176 ~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~---~~ 246 (287)
T 4f0f_A 176 SQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFINMIRE---EG 246 (287)
T ss_dssp CBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-HHHHHHHH---SC
T ss_pred cccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-HHHHHHhc---cC
Confidence 653321 223357899999999984 45688999999999999999999999864332211 11111111 11
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 666 NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 666 ~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
. .+.+.. .....+.+++.+||+.||++|||+.||+++|+++
T Consensus 247 ~-----~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 247 L-----RPTIPE----DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp C-----CCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred C-----CCCCCc----ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0 111111 1224677899999999999999999999999753
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-27 Score=260.36 Aligned_cols=211 Identities=20% Similarity=0.276 Sum_probs=159.6
Q ss_pred HHHHHHhccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEe
Q 004345 487 FEELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE 562 (760)
Q Consensus 487 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~ 562 (760)
+.++....++|++.++||+|+||.||+|+.. +++.||+|++++. .....+.+.+|+.+++.++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4556667889999999999999999999965 5889999999753 23345568999999999999999999999999
Q ss_pred CCeeEEEEeccCCCChhhhh-------------------------------------------------ccccceeEecC
Q 004345 563 REENMLIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~ 593 (760)
.+..+|||||+++|+|.++| +|||+++.+..
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~ 220 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 220 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeecc
Confidence 99999999999999998763 49999987643
Q ss_pred CCcccccceeeeeccccCccccccCC----CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAMEGR----FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVID 669 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (760)
.. .......+||+.|||||++.... ++.++|||||||++|||++|+.||...... .... ..........
T Consensus 221 ~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~---~~~~---~i~~~~~~~~ 293 (410)
T 3v8s_A 221 EG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV---GTYS---KIMNHKNSLT 293 (410)
T ss_dssp TS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH---HHHTHHHHCC
T ss_pred CC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh---hHHH---HHHhcccccc
Confidence 32 12233568999999999998665 789999999999999999999999643221 1111 1110000000
Q ss_pred cccccccCCCCHHHHHHHHHHHHhcccCCcCC--CCCHHHHHHH
Q 004345 670 LVDPLISESGFKMEIIRCVNVGLLCVQEFVKD--RPNMPTVVSM 711 (760)
Q Consensus 670 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPt~~ev~~~ 711 (760)
. + . .......+.+++.+||+.+|.+ ||++.||++.
T Consensus 294 ~--p---~--~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 294 F--P---D--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp C--C---T--TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred C--C---C--cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0 0 0 0011245677888999999988 9999999873
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-27 Score=256.56 Aligned_cols=223 Identities=15% Similarity=0.194 Sum_probs=159.8
Q ss_pred hccccccccccccCCceeEEEEEecC------CcEEEEEEecccCcc-----------chHhHHHHHHHHhcCCCCccce
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQD------GQEIAVKRLSKASGQ-----------GQEEFMNEVMVISNLQHRNLVR 555 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~nIv~ 555 (760)
..++|++.+.||+|+||.||+|.+.. ++.||||++...... ....+.+|+..+.+++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 45689999999999999999998754 478999998654311 1123456677788899999999
Q ss_pred eeeEEEeC----CeeEEEEeccCCCChhhhh-------------------------------------------------
Q 004345 556 LLGCCVER----EENMLIYEYMPNKSLDSFL------------------------------------------------- 582 (760)
Q Consensus 556 l~g~~~~~----~~~~lV~Ey~~~gsL~~~L------------------------------------------------- 582 (760)
+++++... ...+|||||+ +++|.+++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTT
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCC
Confidence 99999875 4579999999 99998763
Q ss_pred ----ccccceeEecCCCcc-----cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCccccccc
Q 004345 583 ----FDFGLARIFGGNQDQ-----AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELT 653 (760)
Q Consensus 583 ----~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~ 653 (760)
+|||+++.+...... .......||+.|||||++.+..++.++|||||||++|||++|+.||....... .
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~--~ 269 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP--K 269 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH--H
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH--H
Confidence 399999876433211 11133569999999999999999999999999999999999999996422221 1
Q ss_pred HHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCCCC
Q 004345 654 LLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAA 722 (760)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~~p 722 (760)
......... ...+.+++++.+..... ...+.+++..||+.||++||++.+|+++|+++++....+
T Consensus 270 ~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~ 334 (364)
T 3op5_A 270 YVRDSKIRY-RENIASLMDKCFPAANA---PGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSK 334 (364)
T ss_dssp HHHHHHHHH-HHCHHHHHHHHSCTTCC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHh-hhhHHHHHHHhcccccC---HHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 111111111 11233333333321111 245677888999999999999999999999877655433
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-27 Score=252.26 Aligned_cols=210 Identities=20% Similarity=0.256 Sum_probs=153.8
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEe----CCeeE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE----REENM 567 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~----~~~~~ 567 (760)
..++|++.+.||+|+||.||+++. .+++.||||++........+.+.+|+.++++++||||+++++++.. ....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 346899999999999999999996 5789999999876555667789999999999999999999999973 34779
Q ss_pred EEEeccCCCChhhhh------------------------------------------------------ccccceeEecC
Q 004345 568 LIYEYMPNKSLDSFL------------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~ 593 (760)
+||||+++|+|.++| +|||+++....
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 999999999997653 38888875431
Q ss_pred CCcc-------cccceeeeeccccCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc
Q 004345 594 NQDQ-------AATKRLVGTYGYMSPEYAMEGR---FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN 663 (760)
Q Consensus 594 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~---~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 663 (760)
.... .......||+.|+|||.+.... ++.++||||||+++|||++|+.||........ .......
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~---- 261 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVALAVQ---- 261 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHHHHHH----
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhhHHhh----
Confidence 1110 0112245799999999987554 78999999999999999999999853211110 1110000
Q ss_pred CCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 664 DNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 664 ~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
. .............+.+++.+||+.||.+|||+.+|++.|+.+.
T Consensus 262 ~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 262 N---------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp C---------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred c---------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 0 0000001112246778999999999999999999999998874
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.8e-27 Score=248.59 Aligned_cols=210 Identities=24% Similarity=0.380 Sum_probs=148.8
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35799999999999999999995 578999999997532 23456799999999999999999999999999999999
Q ss_pred EeccCCCChhhhh------------------------------------------------------ccccceeEecCCC
Q 004345 570 YEYMPNKSLDSFL------------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 570 ~Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~ 595 (760)
|||+++++|.+++ +|||+++......
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~ 190 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC----------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC
Confidence 9999999997653 3899987654322
Q ss_pred cccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 596 DQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
. ......|++.|+|||.+....++.++||||||+++|||++|+.||...... ....... ........ +
T Consensus 191 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~-~~~~~~~~-----~ 258 (310)
T 2wqm_A 191 T--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKK-IEQCDYPP-----L 258 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC----HHHHHHH-HHTTCSCC-----C
T ss_pred c--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh----HHHHHHH-hhcccCCC-----C
Confidence 1 223457899999999999999999999999999999999999998532211 1111111 11111111 0
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
.. ......+.+++.+||+.||++|||+.+|+++|+++...
T Consensus 259 ~~---~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~ 298 (310)
T 2wqm_A 259 PS---DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC 298 (310)
T ss_dssp CT---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cc---cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 00 11124577888999999999999999999999887543
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-27 Score=250.59 Aligned_cols=210 Identities=28% Similarity=0.378 Sum_probs=156.7
Q ss_pred Hhcccccccc-ccccCCceeEEEEEe---cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe
Q 004345 492 NATNNFQLAN-KLGQGGFGPVYKGKL---QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE 565 (760)
Q Consensus 492 ~~~~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~ 565 (760)
...++|.+.+ .||+|+||.||+|.. ..++.||||+++... ....+++.+|+.++++++||||+++++++ ..+.
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 3456788888 999999999999964 246789999997543 23356899999999999999999999999 6677
Q ss_pred eEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCC
Q 004345 566 NMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~ 595 (760)
.++||||+++++|.++| +|||+++......
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred cEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence 89999999999998763 3999998765433
Q ss_pred cc-cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 596 DQ-AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 596 ~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
.. .......+++.|+|||.+....++.++||||||+++|||++ |+.||...... ... .....+....
T Consensus 172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~----~~~~~~~~~~---- 240 (291)
T 1xbb_A 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EVT----AMLEKGERMG---- 240 (291)
T ss_dssp SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHH----HHHHTTCCCC----
T ss_pred CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHH----HHHHcCCCCC----
Confidence 22 12223456788999999998889999999999999999999 99998643221 111 1111111111
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
.+......+.+++.+||+.||++||++.+|+++|++....
T Consensus 241 -----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 241 -----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1111234677899999999999999999999999987644
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.9e-27 Score=247.32 Aligned_cols=201 Identities=26% Similarity=0.414 Sum_probs=151.3
Q ss_pred ccccccccccccCCceeEEEEEecC-C-------cEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQD-G-------QEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~ 565 (760)
.++|++.+.||+|+||.||+|+... + ..||+|++........+.|.+|+.++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3578999999999999999998542 3 4799999987666677889999999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhh-----------------------------------------------------------cccc
Q 004345 566 NMLIYEYMPNKSLDSFL-----------------------------------------------------------FDFG 586 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L-----------------------------------------------------------~DFG 586 (760)
.++||||+++|+|.++| +|||
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg 166 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCc
Confidence 99999999999998864 1455
Q ss_pred ceeEecCCCcccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC
Q 004345 587 LARIFGGNQDQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN 665 (760)
Q Consensus 587 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (760)
+++.. .......||+.|+|||.+.. ..++.++||||||+++|||++|..|+....... ..... .....
T Consensus 167 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~--~~~~~---~~~~~ 235 (289)
T 4fvq_A 167 ISITV------LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ--RKLQF---YEDRH 235 (289)
T ss_dssp SCTTT------SCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHH---HHTTC
T ss_pred ccccc------cCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH--HHHHH---hhccC
Confidence 44322 11123457889999999987 679999999999999999999665543221110 00000 00000
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 666 NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 666 ~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
.. .... ...+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 236 ~~--------~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 236 QL--------PAPK----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp CC--------CCCS----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred CC--------CCCC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 00 0000 1246778899999999999999999999988863
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-27 Score=247.67 Aligned_cols=207 Identities=23% Similarity=0.315 Sum_probs=149.9
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeC--CeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER--EENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~--~~~~lV 569 (760)
.++|++.+.||+|+||.||+|+.. ++.||||++.... ....+.|.+|+.++++++||||+++++++... +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 357889999999999999999985 8899999997542 34456799999999999999999999999887 778999
Q ss_pred EeccCCCChhhhhc---------------------------ccc--c-----------------eeEecCC-Ccccccce
Q 004345 570 YEYMPNKSLDSFLF---------------------------DFG--L-----------------ARIFGGN-QDQAATKR 602 (760)
Q Consensus 570 ~Ey~~~gsL~~~L~---------------------------DFG--l-----------------a~~~~~~-~~~~~~~~ 602 (760)
|||+++|+|.++|. +.| + .++...+ ........
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~ 167 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPG 167 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTT
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccC
Confidence 99999999988752 111 1 1110000 00011123
Q ss_pred eeeeccccCccccccCCCCc---cchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 603 LVGTYGYMSPEYAMEGRFSE---KSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~---ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
..||+.|+|||.+....++. ++||||||+++|||++|+.||....... ........+. .+.+..
T Consensus 168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~-----~~~~~~-- 234 (271)
T 3kmu_A 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME------IGMKVALEGL-----RPTIPP-- 234 (271)
T ss_dssp CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH------HHHHHHHSCC-----CCCCCT--
T ss_pred ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH------HHHHHHhcCC-----CCCCCC--
Confidence 46799999999998765444 8999999999999999999986432211 1111111111 111111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.....+.+++.+||+.||++|||+.++++.|+++.
T Consensus 235 --~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 235 --GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred --CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 12245778889999999999999999999998764
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-27 Score=274.71 Aligned_cols=206 Identities=27% Similarity=0.410 Sum_probs=152.5
Q ss_pred ccccccc-ccccCCceeEEEEEec---CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLAN-KLGQGGFGPVYKGKLQ---DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
+++.+.+ .||+|+||.||+|.+. ++..||||+++... ....++|.+|+++|++++|||||+++++|.. +..+||
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 4455555 7999999999999864 45679999997643 3456789999999999999999999999976 568999
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc-
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ- 597 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~- 597 (760)
|||+++|+|.++| +|||+++.+......
T Consensus 414 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp EECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred EEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 9999999998763 399999866432221
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......+++.|+|||++....++.++|||||||+||||++ |+.||...... .... ....+....
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~~----~i~~~~~~~------- 559 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMA----FIEQGKRME------- 559 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH---HHHH----HHHTTCCCC-------
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHHH----HHHcCCCCC-------
Confidence 11222345689999999999999999999999999999998 99998643322 1111 111111111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
.+......+.+++.+||+.||++||++.+|+++|+....
T Consensus 560 --~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 560 --CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp --CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 111223567889999999999999999999999988643
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-27 Score=259.36 Aligned_cols=210 Identities=27% Similarity=0.408 Sum_probs=147.1
Q ss_pred cccccccccccCCceeEEEEEec--C--CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEe-CCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ--D--GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVE-REENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~--~--~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~-~~~~~l 568 (760)
..|++.+.||+|+||.||+|+.. + ...||||.++... ....++|.+|+.++++++||||++++++|.+ ++..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 35778899999999999999853 2 2468999987543 3456789999999999999999999999765 457899
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||||+++|+|.++| +|||+++.+......
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 248 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccc
Confidence 99999999998763 399999866432211
Q ss_pred --cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 598 --AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 598 --~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
.......+|+.|+|||.+....++.++|||||||++|||++ |..|+...... ....... .+.. ...
T Consensus 249 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~---~~~~~~~----~~~~--~~~-- 317 (373)
T 3c1x_A 249 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITVYLL----QGRR--LLQ-- 317 (373)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS---CHHHHHH----TTCC--CCC--
T ss_pred cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH---HHHHHHH----cCCC--CCC--
Confidence 12233467889999999999999999999999999999999 56666533221 1111111 1110 000
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
.. .....+.+++.+||+.||++|||+.||++.|+++.....
T Consensus 318 -p~----~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 318 -PE----YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp -CT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred -CC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 11 112457788999999999999999999999998865443
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-27 Score=249.77 Aligned_cols=214 Identities=23% Similarity=0.359 Sum_probs=149.5
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 67999999999999999999965 589999999865432 235678899999999999999999999999999999999
Q ss_pred ccCCCChhhh--------------------------------------------------hccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
|+++++|..+ |+|||+++....... ...
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~ 160 (311)
T 4agu_A 83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD--YYD 160 (311)
T ss_dssp CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc--ccC
Confidence 9999988765 249999987643222 223
Q ss_pred eeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHH--------HhccCCCcccccc
Q 004345 602 RLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAW--------KLWNDNNVIDLVD 672 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~d 672 (760)
...||+.|+|||.+.+ ..++.++||||||+++|||++|+.||................ ..+..........
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (311)
T 4agu_A 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240 (311)
T ss_dssp -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCc
Confidence 4578999999999976 668999999999999999999999996543322211111000 0000000000000
Q ss_pred -ccccCCCC-----HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 -PLISESGF-----KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 -~~l~~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+....... ......+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000000 112245778999999999999999999987
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.2e-28 Score=258.34 Aligned_cols=207 Identities=30% Similarity=0.466 Sum_probs=153.3
Q ss_pred ccccccccccccCCceeEEEEEe------cCCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 566 (760)
.++|++.+.||+|+||.||+|+. .+++.||||++... ......++.+|+.++++++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46799999999999999999984 25678999999744 234456899999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhh------------------------------------------------------------cccc
Q 004345 567 MLIYEYMPNKSLDSFL------------------------------------------------------------FDFG 586 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L------------------------------------------------------------~DFG 586 (760)
++||||+++++|.++| +|||
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg 188 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccc
Confidence 9999999999987653 2777
Q ss_pred ceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCC
Q 004345 587 LARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDN 665 (760)
Q Consensus 587 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (760)
+++...............+|+.|+|||.+....++.++||||||+++|||++ |+.||...... ...... ..+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~~----~~~ 261 (327)
T 2yfx_A 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---EVLEFV----TSG 261 (327)
T ss_dssp HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHHH----HTT
T ss_pred cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH---HHHHHH----hcC
Confidence 7764432222222233567889999999999999999999999999999998 88888643221 111111 111
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 666 NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 666 ~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.... ... .....+.+++.+||+.||.+|||+.+|++.|+...
T Consensus 262 ~~~~-----~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 262 GRMD-----PPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp CCCC-----CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCC-----CCC----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 1100 111 11245778899999999999999999999998764
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-27 Score=255.20 Aligned_cols=208 Identities=27% Similarity=0.439 Sum_probs=151.8
Q ss_pred ccccccccccccCCceeEEEEEecC-----CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQD-----GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
.++|++.+.||+|+||.||+|.... +..||||+++... ......|.+|+.++++++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3568888999999999999998642 2469999997543 234567999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCc
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+||||+++|+|.++| +|||+++.......
T Consensus 123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 999999999998763 39999987643322
Q ss_pred c-cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 597 Q-AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 597 ~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
. .......+|+.|+|||.+....++.++||||||+++|||++ |+.||...... .+.. ....+...
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~---~~~~----~~~~~~~~------ 269 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH---EVMK----AINDGFRL------ 269 (333)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH----HHHTTCCC------
T ss_pred cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH---HHHH----HHHCCCcC------
Confidence 1 11223346788999999999999999999999999999999 99998533221 1111 11111100
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
..+......+.+++.+||+.||++||++.+|+++|+++++
T Consensus 270 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 270 ---PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp ---CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ---CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0011122457788999999999999999999999988754
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.6e-28 Score=257.75 Aligned_cols=214 Identities=25% Similarity=0.401 Sum_probs=158.8
Q ss_pred ccccccccccccCCceeEEEEEe-----cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCC--ee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-----QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE--EN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~--~~ 566 (760)
.++|++.+.||+|+||.||+++. .+++.||||++........+.|.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35689999999999999999983 368899999998766566778999999999999999999999987654 67
Q ss_pred EEEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCC
Q 004345 567 MLIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~ 595 (760)
++||||+++++|.++| +|||+++......
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~ 199 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence 9999999999998763 3999998875433
Q ss_pred cc-cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccc--------c-ccHHHHHHHhccCC
Q 004345 596 DQ-AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEF--------E-LTLLGYAWKLWNDN 665 (760)
Q Consensus 596 ~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~--------~-~~~~~~~~~~~~~~ 665 (760)
.. .......++..|+|||.+....++.++||||||+++|||++|+.|+.....+. . .............+
T Consensus 200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (326)
T 2w1i_A 200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279 (326)
T ss_dssp SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcC
Confidence 22 11223457788999999998889999999999999999999998875211000 0 00000001111110
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 666 NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 666 ~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
. ....+......+.+++.+||+.||++|||+.||+++|+++.
T Consensus 280 ~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 280 G---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp C---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred C---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0 00111122356788999999999999999999999998764
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-27 Score=253.52 Aligned_cols=196 Identities=18% Similarity=0.265 Sum_probs=151.5
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|.+.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.+++.++||||+++++++......++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 36799999999999999999996 57899999998643 223456799999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||+ +|+|.+++ +|||+++...... .
T Consensus 88 ~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~---~ 163 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN---F 163 (336)
T ss_dssp ECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB---T
T ss_pred EECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc---c
Confidence 9999 67776652 4999998654322 2
Q ss_pred cceeeeeccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRF-SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
....+||+.|+|||.+.+..+ +.++|||||||++|||++|+.||....... ..+.+.... ..
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~----------------~~~~i~~~~-~~ 226 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN----------------LFKKVNSCV-YV 226 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT----------------CBCCCCSSC-CC
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH----------------HHHHHHcCC-CC
Confidence 234579999999999987776 789999999999999999999986432111 000000000 00
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+......+.+++.+||+.||.+|||+.|+++
T Consensus 227 ~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 227 MPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred CcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 11112245678899999999999999999987
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=7.8e-27 Score=243.94 Aligned_cols=203 Identities=23% Similarity=0.361 Sum_probs=155.4
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 367999999999999999999965 68999999987443 3445789999999999999999999999999999999999
Q ss_pred ccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
|+++++|.+++ +|||+++.+..........
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 165 (276)
T 2yex_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165 (276)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhccc
Confidence 99999997763 3999998764333222334
Q ss_pred eeeeeccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRF-SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...|++.|+|||.+....+ +.++||||||+++|||++|+.||........ ....+. .... ...+ .
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~-----~~~~--~~~~------~ 231 (276)
T 2yex_A 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWK-----EKKT--YLNP------W 231 (276)
T ss_dssp CCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHHH-----TTCT--TSTT------G
T ss_pred CCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHhh-----hccc--ccCc------h
Confidence 5678999999999987665 7899999999999999999999964332211 111111 1100 0000 0
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 232 KKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 111245678899999999999999999876
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=254.22 Aligned_cols=199 Identities=19% Similarity=0.262 Sum_probs=153.3
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||++... +++.||+|++.+. .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 67999999999999999999964 6889999999753 2345678999999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++|+|..+| +|||+++.+.... ..
T Consensus 95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---~~ 171 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET---QI 171 (384)
T ss_dssp CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC---CB
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC---ce
Confidence 999999997653 4999998764332 23
Q ss_pred ceeeeeccccCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 601 KRLVGTYGYMSPEYAME---GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~---~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
...+||+.|+|||++.. ..++.++|||||||++|||++|+.||..........+...... .. .
T Consensus 172 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~----~~----------~ 237 (384)
T 4fr4_A 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET----TV----------V 237 (384)
T ss_dssp CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH----CC----------C
T ss_pred eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh----cc----------c
Confidence 35689999999999974 4589999999999999999999999964332221111111100 00 0
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCC-HHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPN-MPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt-~~ev~~ 710 (760)
..+......+.+++.+||+.||.+||+ +.+|.+
T Consensus 238 ~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 011112246778899999999999998 666654
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=243.31 Aligned_cols=200 Identities=20% Similarity=0.252 Sum_probs=154.5
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.++|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 467999999999999999999965 5678999999876666778899999999999999999999999999999999999
Q ss_pred cCCCChhhhh-----------------------------------------------------ccccceeEecCCCcccc
Q 004345 573 MPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 573 ~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
+++++|.+++ +|||+++.+.... .
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~---~ 164 (277)
T 3f3z_A 88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---M 164 (277)
T ss_dssp CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS---C
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc---c
Confidence 9999997652 3899988764332 2
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....||+.|+|||.+.+ .++.++||||||+++|||++|+.||....... ..... ..+... ..... ..
T Consensus 165 ~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~----~~~~~~-~~~~~-~~-- 232 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE---VMLKI----REGTFT-FPEKD-WL-- 232 (277)
T ss_dssp BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHH----HHCCCC-CCHHH-HT--
T ss_pred hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH---HHHHH----HhCCCC-CCchh-hh--
Confidence 234578999999998865 49999999999999999999999986432211 11111 111000 00000 00
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.....+.+++.+||+.||++|||+.|+++
T Consensus 233 --~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 233 --NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp --TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01246778899999999999999999986
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-27 Score=253.59 Aligned_cols=193 Identities=25% Similarity=0.317 Sum_probs=142.9
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.++||+|+||+||+|+.. +++.||||++.... .....++.+|+..+.++ +||||++++++|.+++..+|||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 67999999999999999999975 78999999986532 23344566677666555 8999999999999999999999
Q ss_pred eccCCCChhhhh---------------------------------------------------ccccceeEecCCCcccc
Q 004345 571 EYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 571 Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
||+ +++|.+++ +|||+++...... .
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~---~ 212 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG---A 212 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-------
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC---C
Confidence 999 66776542 4999998764322 2
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....||+.|+|||++.+ .++.++|||||||++|||++|..|+.... .+.....+.. .+.+...
T Consensus 213 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----------~~~~~~~~~~----~~~~~~~- 276 (311)
T 3p1a_A 213 GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----------GWQQLRQGYL----PPEFTAG- 276 (311)
T ss_dssp --CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----------HHHHHTTTCC----CHHHHTT-
T ss_pred CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----------HHHHHhccCC----CcccccC-
Confidence 234568999999998875 79999999999999999999977653211 0111111111 1111111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+.+++.+||+.||++|||+.|+++
T Consensus 277 ---~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 277 ---LSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---CCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1256788999999999999999999986
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.94 E-value=9.4e-27 Score=253.75 Aligned_cols=203 Identities=20% Similarity=0.273 Sum_probs=145.9
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.++|++.+.||+|+||.||+++.. +++.||||++.... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 468999999999999999999965 78999999997542 3456789999999999999999999999999999999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+++|+|.+++ +|||+++..... ...
T Consensus 98 ~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~---~~~ 174 (361)
T 3uc3_A 98 ASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH---SQP 174 (361)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------------
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc---CCC
Confidence 9999997763 389988743221 122
Q ss_pred ceeeeeccccCccccccCCCCcc-chhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEK-SDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~k-sDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
....||+.|+|||++....++.+ +|||||||++|||++|+.||....... ............. . .+..
T Consensus 175 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~-~------~~~~-- 243 (361)
T 3uc3_A 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVK-Y------SIPD-- 243 (361)
T ss_dssp ------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTC-C------CCCT--
T ss_pred CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCC-C------CCCC--
Confidence 34579999999999988887766 899999999999999999986433221 1111111111110 0 0000
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00112457789999999999999999999873
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-26 Score=252.26 Aligned_cols=201 Identities=20% Similarity=0.275 Sum_probs=140.1
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
..++|++.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 4577999999999999999999975 57899999997542 35678899999999999999999999999999999999
Q ss_pred ccCCCChhhhh-----------------------------------------------------ccccceeEecCCCccc
Q 004345 572 YMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 572 y~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
|+++|+|.++| +|||+++......
T Consensus 129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--- 205 (349)
T 2w4o_A 129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--- 205 (349)
T ss_dssp CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc---
Confidence 99999997753 3899988653221
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ... ........ ....+.
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~----~~i~~~~~-~~~~~~---- 274 (349)
T 2w4o_A 206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ--FMF----RRILNCEY-YFISPW---- 274 (349)
T ss_dssp -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH--HHH----HHHHTTCC-CCCTTT----
T ss_pred ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH--HHH----HHHHhCCC-ccCCch----
Confidence 2234678999999999999999999999999999999999999986432221 011 11111110 001110
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.......+.+++.+||+.||++|||+.|+++
T Consensus 275 -~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 275 -WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -hhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1112245778899999999999999999987
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.3e-27 Score=246.24 Aligned_cols=206 Identities=29% Similarity=0.413 Sum_probs=153.3
Q ss_pred hccccccccccccCCceeEEEEEecC----CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQD----GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
..++|++.+.||+|+||.||+|+... +..||||.+.... ....+.|.+|+.++++++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 34679999999999999999998542 3469999997542 3456789999999999999999999999764 5578
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCc
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+||||+++++|.+++ +|||+++.......
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence 999999999998763 39999876543221
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
.......+++.|+|||.+....++.++||||||+++|||++ |+.||....... ....... +... ..
T Consensus 169 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~~~~~----~~~~-----~~ 235 (281)
T 3cc6_A 169 -YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIGVLEK----GDRL-----PK 235 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHHHHHH----TCCC-----CC
T ss_pred -cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHHHHhc----CCCC-----CC
Confidence 12223457889999999998999999999999999999998 999986433221 1111111 1000 00
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.. .....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 236 ~~----~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 236 PD----LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp CT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC----CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 11 11245778899999999999999999999998764
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-26 Score=255.11 Aligned_cols=220 Identities=20% Similarity=0.254 Sum_probs=162.7
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC--eeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE--ENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~--~~~lV~ 570 (760)
++|++.++||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 57999999999999999999965 58999999997543 344677899999999999999999999998765 679999
Q ss_pred eccCCCChhhhh---------------------------------------------------------ccccceeEecC
Q 004345 571 EYMPNKSLDSFL---------------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 571 Ey~~~gsL~~~L---------------------------------------------------------~DFGla~~~~~ 593 (760)
||+++|+|.++| +|||+++....
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 999999987652 39999987643
Q ss_pred CCcccccceeeeeccccCcccccc--------CCCCccchhHHHHHHHHHHHhCCCCCCCCccccc-ccHHHHHHHhccC
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAME--------GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFE-LTLLGYAWKLWND 664 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~-~~~~~~~~~~~~~ 664 (760)
.. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||........ .............
T Consensus 169 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~ 245 (396)
T 4eut_A 169 DE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245 (396)
T ss_dssp GG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCT
T ss_pred CC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCc
Confidence 32 2234579999999999865 5678899999999999999999999864332211 1111111111111
Q ss_pred CCcccc---cc------c--cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 665 NNVIDL---VD------P--LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 665 ~~~~~~---~d------~--~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
...... .. . .............+.+++.+||+.||++||++.|+++.|++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 110000 00 0 01112335566778899999999999999999999999987654
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.8e-27 Score=255.94 Aligned_cols=200 Identities=19% Similarity=0.289 Sum_probs=149.1
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~l 568 (760)
.++|++.++||+|+||.||+++.. +++.||||++++.. ....+.+.+|..++.++ +|||||++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999965 57899999997542 23445688999999877 89999999999999999999
Q ss_pred EEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCccc
Q 004345 569 IYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 569 V~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||||+++|+|..+| +|||+++..... ..
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~--~~ 208 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GD 208 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--TC
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccC--CC
Confidence 99999999997653 499999853222 12
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCccccc--ccHHHHHHHhccCCCcccccccccc
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFE--LTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.....+||+.|+|||++....++.++|||||||++|||++|+.||........ ................ .+
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~~- 281 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------RI- 281 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------CC-
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------CC-
Confidence 33457899999999999999999999999999999999999999964322111 0011111111111110 01
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCH
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNM 705 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~ 705 (760)
+......+.+++.+||+.||++||++
T Consensus 282 ---p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 282 ---PRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ---CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ---CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 11122457788899999999999996
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-27 Score=245.27 Aligned_cols=196 Identities=24% Similarity=0.377 Sum_probs=153.7
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEe----------
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE---------- 562 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~---------- 562 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++... .+.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 357999999999999999999975 7899999998643 2468899999999999999999999864
Q ss_pred ------CCeeEEEEeccCCCChhhhh----------------------------------------------------cc
Q 004345 563 ------REENMLIYEYMPNKSLDSFL----------------------------------------------------FD 584 (760)
Q Consensus 563 ------~~~~~lV~Ey~~~gsL~~~L----------------------------------------------------~D 584 (760)
....++||||+++++|.++| +|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECC
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECc
Confidence 44579999999999998763 39
Q ss_pred ccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC
Q 004345 585 FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND 664 (760)
Q Consensus 585 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 664 (760)
||+++....... .....||+.|+|||.+....++.++||||||+++|||++|..|+... . . .......
T Consensus 166 fg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~---~-~~~~~~~ 233 (284)
T 2a19_B 166 FGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----S---K-FFTDLRD 233 (284)
T ss_dssp CTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----H---H-HHHHHHT
T ss_pred chhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----H---H-HHHHhhc
Confidence 999987643321 22356899999999999999999999999999999999999876310 0 0 1111111
Q ss_pred CCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 665 NNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 665 ~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
+.. ....+ ..+.+++.+||+.||++|||+.|+++.|+...+
T Consensus 234 ~~~--------~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 234 GII--------SDIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp TCC--------CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred ccc--------cccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 111 11111 346678899999999999999999999988753
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=248.58 Aligned_cols=195 Identities=24% Similarity=0.332 Sum_probs=154.1
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.+.||+|+||.||+++.. +++.||+|++++. .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 367999999999999999999964 6899999999753 224556788999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||+++|+|.++| +|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~----- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV----- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-----
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc-----
Confidence 9999999998763 399999875421
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
....+||+.|+|||++....++.++|||||||++|||++|+.||...... .. ....... .. .+..
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~---~~~i~~~-~~------~~p~-- 224 (318)
T 1fot_A 160 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM---KT---YEKILNA-EL------RFPP-- 224 (318)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HH---HHHHHHC-CC------CCCT--
T ss_pred cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HH---HHHHHhC-CC------CCCC--
Confidence 23467999999999999999999999999999999999999998643211 11 1111111 00 0111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
.....+.+++.+|++.||++|| ++.+|++
T Consensus 225 --~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 225 --FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1124567888899999999999 8888885
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-27 Score=254.59 Aligned_cols=198 Identities=23% Similarity=0.329 Sum_probs=149.6
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~l 568 (760)
.++|++.++||+|+||.||+|+.. +++.||||++++. .....+.+.+|..++..+ +||||+++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 478999999999999999999964 6899999999753 234556788999999988 79999999999999999999
Q ss_pred EEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCccc
Q 004345 569 IYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 569 V~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||||+++|+|..+| +|||+++..... ..
T Consensus 102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~--~~ 179 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN--GV 179 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-----
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccC--Cc
Confidence 99999999997663 499999853222 22
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
.....+||+.|+|||++....++.++|||||||++|||++|+.||...... .+.. ... .+.. .
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~~~---~i~-~~~~------~---- 242 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED---DLFE---AIL-NDEV------V---- 242 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---HHH-HCCC------C----
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH---HHHH---HHH-cCCC------C----
Confidence 334568999999999999889999999999999999999999999643221 1111 111 1110 0
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCH------HHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNM------PTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~------~ev~~ 710 (760)
.+......+.+++.+||+.||++||++ .||++
T Consensus 243 ~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 243 YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 011122456788899999999999998 67765
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-27 Score=247.51 Aligned_cols=210 Identities=25% Similarity=0.322 Sum_probs=155.6
Q ss_pred ccccccccccCCceeEEEEEec-C---CcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCee-EEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-D---GQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN-MLI 569 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~-~lV 569 (760)
.|++.++||+|+||.||+|+.. + +..||+|++..... ...+.|.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4666799999999999999853 2 23799999975433 4457899999999999999999999999876665 999
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCc--
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQD-- 596 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~-- 596 (760)
|||+.+|+|.+++ +|||+++.+.....
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence 9999999998763 39999976533221
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
........+|+.|+|||.+....++.++||||||+++|||++|..|+...... ......... +...
T Consensus 182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--~~~~~~~~~----~~~~-------- 247 (298)
T 3pls_A 182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--FDLTHFLAQ----GRRL-------- 247 (298)
T ss_dssp SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--GGHHHHHHT----TCCC--------
T ss_pred cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--HHHHHHhhc----CCCC--------
Confidence 12223456789999999999999999999999999999999976665322211 111111111 1100
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
..+......+.+++.+||+.||.+|||+.+++++|+++++.+.
T Consensus 248 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 248 -PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred -CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 0011112457788999999999999999999999999866543
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=241.48 Aligned_cols=201 Identities=22% Similarity=0.307 Sum_probs=154.6
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999964 68899999986542 334567899999999999999999999999999999999
Q ss_pred eccCCCChhhhh-----------------------------------------------------ccccceeEecCCCcc
Q 004345 571 EYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 571 Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||+++++|.+++ +|||++........
T Consensus 85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~- 163 (284)
T 3kk8_A 85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA- 163 (284)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB-
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc-
Confidence 999999996542 38999887643222
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
.....||+.|+|||.+....++.++||||||+++|||++|+.||...... ....... .+.. ....+.
T Consensus 164 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---~~~~~~~----~~~~-~~~~~~--- 230 (284)
T 3kk8_A 164 --WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYAQIK----AGAY-DYPSPE--- 230 (284)
T ss_dssp --CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH----HTCC-CCCTTT---
T ss_pred --ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh---HHHHHHH----hccc-cCCchh---
Confidence 23457899999999999999999999999999999999999998643221 1111111 1100 000000
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.......+.+++.+||+.||++|||+.|+++
T Consensus 231 --~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 231 --WDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp --TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --hcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0111245778889999999999999999987
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.5e-27 Score=252.94 Aligned_cols=216 Identities=18% Similarity=0.213 Sum_probs=150.8
Q ss_pred ccccccccccccCCceeEEEEEec----CCcEEEEEEecccCcc-----------chHhHHHHHHHHhcCCCCccceeee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ----DGQEIAVKRLSKASGQ-----------GQEEFMNEVMVISNLQHRNLVRLLG 558 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~nIv~l~g 558 (760)
.++|++.+.||+|+||.||+|... .+..+|||++...... ..+.+.+|+.++..++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367999999999999999999975 5678999998754321 2234778899999999999999999
Q ss_pred EEEe----CCeeEEEEeccCCCChhhhh----------------------------------------------------
Q 004345 559 CCVE----REENMLIYEYMPNKSLDSFL---------------------------------------------------- 582 (760)
Q Consensus 559 ~~~~----~~~~~lV~Ey~~~gsL~~~L---------------------------------------------------- 582 (760)
++.. ....++||||+ +++|.+++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL 194 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYL 194 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEE
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEE
Confidence 9988 67889999999 99998763
Q ss_pred ccccceeEecCCCcc-----cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHH
Q 004345 583 FDFGLARIFGGNQDQ-----AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGY 657 (760)
Q Consensus 583 ~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~ 657 (760)
+|||+++.+...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ....
T Consensus 195 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~~~~ 272 (345)
T 2v62_A 195 ADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV--AVQT 272 (345)
T ss_dssp CCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH--HHHH
T ss_pred EeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH--HHHH
Confidence 399999876432211 112345799999999999999999999999999999999999999853221111 1111
Q ss_pred HHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 658 AWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 658 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
....... .....+...... ......+.+++.+||+.||++|||+.+|+++|++..
T Consensus 273 ~~~~~~~-~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 273 AKTNLLD-ELPQSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHH-TTTHHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHhhcc-cccHHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 1111000 000100000000 012246778889999999999999999999998763
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.3e-27 Score=251.42 Aligned_cols=214 Identities=23% Similarity=0.378 Sum_probs=150.0
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCc--cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 67999999999999999999965 588999999865432 234568899999999999999999999999999999999
Q ss_pred ccCCCChhhh--------------------------------------------------hccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
|+++++|..+ |+|||+++.+..... ...
T Consensus 105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~ 182 (331)
T 4aaa_A 105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYD 182 (331)
T ss_dssp CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-------------
T ss_pred cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc--ccC
Confidence 9999887764 249999986543221 223
Q ss_pred eeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH--------HHhccCCC-ccccc
Q 004345 602 RLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA--------WKLWNDNN-VIDLV 671 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~--------~~~~~~~~-~~~~~ 671 (760)
...||+.|+|||.+... .++.++|||||||++|||++|+.||............... ...+.... .....
T Consensus 183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (331)
T 4aaa_A 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262 (331)
T ss_dssp -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCC
T ss_pred CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccccc
Confidence 45789999999999875 7899999999999999999999998654332211110000 00000000 00001
Q ss_pred cccccCCCCH-----HHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 672 DPLISESGFK-----MEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 672 d~~l~~~~~~-----~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+.+...... .....+.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 263 LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1111111111 12356788999999999999999999876
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=249.31 Aligned_cols=198 Identities=22% Similarity=0.314 Sum_probs=143.8
Q ss_pred ccccccccccccCCceeEEEEEe----cCCcEEEEEEecccC----ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL----QDGQEIAVKRLSKAS----GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~ 565 (760)
.++|++.+.||+|+||.||+++. .+++.||+|++++.. ......+.+|+.++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999986 478999999997542 2344568899999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCC
Q 004345 566 NMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~ 595 (760)
.++||||+++++|.++| +|||+++......
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 175 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG 175 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC
Confidence 99999999999997653 4999987643221
Q ss_pred cccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 596 DQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
.......||+.|+|||.+....++.++|||||||++|||++|+.||...... ........ . .. .+
T Consensus 176 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i~~---~-~~------~~ 240 (327)
T 3a62_A 176 --TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK---KTIDKILK---C-KL------NL 240 (327)
T ss_dssp -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHH---T-CC------CC
T ss_pred --ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHh---C-CC------CC
Confidence 1223457999999999999999999999999999999999999998643221 11111111 0 00 01
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
.. .....+.+++.+||+.||++|| ++.|+++
T Consensus 241 p~----~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 241 PP----YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CT----TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CC----CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11 1124577888999999999999 6778776
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9.3e-27 Score=243.95 Aligned_cols=198 Identities=29% Similarity=0.391 Sum_probs=147.8
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeC-CeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER-EENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~-~~~~lV~Ey 572 (760)
.++|++.+.||+|+||.||++... ++.||||+++.. ...+.|.+|+.++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 468999999999999999999875 889999998743 3567899999999999999999999997655 478999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+++++|.+++ +|||+++..... .
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-----~ 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----Q 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc-----c
Confidence 9999997763 389988754322 1
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
....+++.|+|||.+....++.++||||||+++|||++ |+.|+...... ..... ...+.. ....
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~~~----~~~~~~-----~~~~--- 236 (278)
T 1byg_A 172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPR----VEKGYK-----MDAP--- 236 (278)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHHHH----HTTTCC-----CCCC---
T ss_pred cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HhcCCC-----CCCc---
Confidence 22357889999999999999999999999999999998 99998643221 11111 111110 1111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 237 -~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i 271 (278)
T 1byg_A 237 -DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271 (278)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence 11224677888999999999999999999999876
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7.5e-27 Score=250.79 Aligned_cols=199 Identities=21% Similarity=0.245 Sum_probs=131.9
Q ss_pred cccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 501 NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
+.||+|+||.||+|... +++.||||++.+. ....+.+|+.++.++. ||||+++++++.++...++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 78999999999999964 6899999998643 4567889999999997 99999999999999999999999999999
Q ss_pred hhhh-----------------------------------------------------ccccceeEecCCCcccccceeee
Q 004345 579 DSFL-----------------------------------------------------FDFGLARIFGGNQDQAATKRLVG 605 (760)
Q Consensus 579 ~~~L-----------------------------------------------------~DFGla~~~~~~~~~~~~~~~~g 605 (760)
.++| +|||+++...... .......|
T Consensus 94 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~ 171 (325)
T 3kn6_A 94 FERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPLKTPCF 171 (325)
T ss_dssp HHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------------
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--CcccccCC
Confidence 7763 3999998654322 22234578
Q ss_pred eccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHH
Q 004345 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEII 685 (760)
Q Consensus 606 t~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 685 (760)
|+.|+|||.+....++.++|||||||++|||++|+.||.....................+... ...........
T Consensus 172 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~s~ 245 (325)
T 3kn6_A 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS------FEGEAWKNVSQ 245 (325)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC------CCSHHHHTSCH
T ss_pred CcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC------CCcccccCCCH
Confidence 999999999999999999999999999999999999996433221111111111111111110 00000001135
Q ss_pred HHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 686 RCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 686 ~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 246 EAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred HHHHHHHHHCCCChhHCCCHHHHhc
Confidence 6778999999999999999999875
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-26 Score=240.57 Aligned_cols=198 Identities=23% Similarity=0.321 Sum_probs=147.7
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.+.||+|+||.||++... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 57899999999999999999964 68899999997543 34567899999999999999999999999999999999999
Q ss_pred cCCCChhhhh---------------------------------------------------------ccccceeEecCCC
Q 004345 573 MPNKSLDSFL---------------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 573 ~~~gsL~~~L---------------------------------------------------------~DFGla~~~~~~~ 595 (760)
+++|+|.++| +|||+++.+....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 9999987653 3899887654322
Q ss_pred cccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 596 DQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
......||+.|+|||.+. ..++.++||||||+++|||++|+.||....... ...... ...... ...
T Consensus 182 ---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~---~~~~~~--~~~~~~-~~~---- 247 (285)
T 3is5_A 182 ---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE---VQQKAT--YKEPNY-AVE---- 247 (285)
T ss_dssp --------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHH--HCCCCC-CC-----
T ss_pred ---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH---HHhhhc--cCCccc-ccc----
Confidence 223457899999999875 568999999999999999999999986432211 111000 000000 000
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
... ....+.+++.+||+.||++|||+.||++
T Consensus 248 ~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp -CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 1245678889999999999999999986
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.4e-27 Score=273.12 Aligned_cols=199 Identities=28% Similarity=0.379 Sum_probs=148.1
Q ss_pred cccccCCceeEEEEEec---CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ---DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
++||+|+||.||+|.+. .++.||||+++... ....++|.+|+++|++++|||||+++++|.. +..+||||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 46789999997543 2345789999999999999999999999964 568899999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcc-cccceee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQ-AATKRLV 604 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~-~~~~~~~ 604 (760)
|+|.++| +|||+++.+...... .......
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~ 533 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 533 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCC
Confidence 9998763 499999876433221 2223345
Q ss_pred eeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 605 gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
+|+.|+|||++....++.++|||||||+||||++ |+.||....... .. .....+.... .+...
T Consensus 534 ~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~----~~i~~~~~~~---------~p~~~ 597 (635)
T 4fl3_A 534 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VT----AMLEKGERMG---------CPAGC 597 (635)
T ss_dssp -CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HH----HHHHTTCCCC---------CCTTC
T ss_pred CceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHHcCCCCC---------CCCCC
Confidence 6789999999999999999999999999999998 999986433221 11 1111111111 11112
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
...+.+++..||+.||++||++.+|+++|++..
T Consensus 598 ~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 598 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 356788999999999999999999999998764
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-26 Score=249.03 Aligned_cols=192 Identities=21% Similarity=0.306 Sum_probs=152.0
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc--------cchHhHHHHHHHHhcCCCCccceeeeEEEeCC
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG--------QGQEEFMNEVMVISNLQHRNLVRLLGCCVERE 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~ 564 (760)
.++|++.+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 56899999999999999999985 5788999999975421 23457889999999999999999999999999
Q ss_pred eeEEEEeccCCC-Chhhhh--------------------------------------------------ccccceeEecC
Q 004345 565 ENMLIYEYMPNK-SLDSFL--------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 565 ~~~lV~Ey~~~g-sL~~~L--------------------------------------------------~DFGla~~~~~ 593 (760)
..++||||+.+| +|..++ +|||+++.+..
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 182 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence 999999999877 877652 49999987643
Q ss_pred CCcccccceeeeeccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAMEGRF-SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
.. ......||+.|+|||.+....+ +.++|||||||++|||++|+.||...... ..
T Consensus 183 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------------~~ 238 (335)
T 3dls_A 183 GK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------------------VE 238 (335)
T ss_dssp TC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------------------TT
T ss_pred CC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------------------Hh
Confidence 32 2234679999999999988876 88999999999999999999998532110 00
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
..+.. +......+.+++.+||+.||++|||+.++++.
T Consensus 239 ~~~~~--~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 AAIHP--PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp TCCCC--SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred hccCC--CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 00012457788899999999999999999884
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-26 Score=240.32 Aligned_cols=214 Identities=19% Similarity=0.284 Sum_probs=159.3
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEE-EeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC-VEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~-~~~~~~~lV~E 571 (760)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ..+++.+|+.++++++|++++..++.+ .+....++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46899999999999999999995 578999999986532 345789999999999988877766665 56677899999
Q ss_pred ccCCCChhhhh------------------------------------------------------ccccceeEecCCCcc
Q 004345 572 YMPNKSLDSFL------------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 572 y~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
|+ +++|.+++ +|||+++........
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 99 89987763 399999876543321
Q ss_pred -----cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 598 -----AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 598 -----~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||........................
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----- 239 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI----- 239 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----
T ss_pred cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-----
Confidence 1223467999999999999999999999999999999999999999754332222222111111000000
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCC
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDL 719 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~ 719 (760)
+.+.... ...+.+++.+||+.||++|||+.+|+++|+++....
T Consensus 240 ~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 240 EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHhhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 0011111 245778999999999999999999999999876543
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.93 E-value=8e-27 Score=249.12 Aligned_cols=210 Identities=22% Similarity=0.236 Sum_probs=148.9
Q ss_pred cccccc-cccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLA-NKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|++. +.||+|+||.||+|+. .+++.||||++........+.+.+|+.++.++ +||||+++++++.+++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 567774 7899999999999995 47899999999876666678899999999985 79999999999999999999999
Q ss_pred ccCCCChhhhh-----------------------------------------------------ccccceeEecCCCc--
Q 004345 572 YMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQD-- 596 (760)
Q Consensus 572 y~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~-- 596 (760)
|+++|+|.++| +|||+++.......
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (316)
T 2ac3_A 92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171 (316)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------
T ss_pred cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc
Confidence 99999998763 38888876532211
Q ss_pred ---ccccceeeeeccccCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccH--------HHHHHH
Q 004345 597 ---QAATKRLVGTYGYMSPEYAME-----GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTL--------LGYAWK 660 (760)
Q Consensus 597 ---~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~--------~~~~~~ 660 (760)
........||+.|+|||.+.. ..++.++|||||||++|||++|+.||........... ......
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (316)
T 2ac3_A 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE 251 (316)
T ss_dssp ----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHH
T ss_pred cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHH
Confidence 111223468999999999875 5588999999999999999999999965432210000 000011
Q ss_pred hccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 661 LWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 661 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+.. ...+.. .. .....+.+++.+||+.||++|||+.|+++
T Consensus 252 ~i~~~~~-~~~~~~-~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 252 SIQEGKY-EFPDKD-WA----HISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHCCC-CCCHHH-HT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhccCc-ccCchh-cc----cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1111100 000000 00 01245778999999999999999999988
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-26 Score=249.46 Aligned_cols=194 Identities=23% Similarity=0.290 Sum_probs=154.3
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+++.. +++.||||++.+. .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 67999999999999999999965 6899999999753 2345678999999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++|+|.++| +|||+++..... .
T Consensus 121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-----~ 195 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----T 195 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----B
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC-----c
Confidence 999999998763 499999876432 2
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...+||+.|+|||++....++.++|||||||++|||++|+.||...... .... .. ..+.. .+...
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~---~i-~~~~~------~~p~~-- 260 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYE---KI-VSGKV------RFPSH-- 260 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---HH-HHCCC------CCCTT--
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH---HHHH---HH-HcCCC------CCCCC--
Confidence 3468999999999999999999999999999999999999998633211 1111 11 11110 01111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCC-----HHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPN-----MPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 710 (760)
....+.+++.+||+.||.+||+ +.||++
T Consensus 261 --~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 261 --FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1245778889999999999998 888876
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-26 Score=244.12 Aligned_cols=200 Identities=20% Similarity=0.284 Sum_probs=151.3
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.++|++.+.||+|+||.||+++.. +++.||+|+++.......+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 367999999999999999999964 7899999999865545566799999999999999999999999999999999999
Q ss_pred cCCCChhhhh-----------------------------------------------------ccccceeEecCCCcccc
Q 004345 573 MPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 573 ~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
+++++|.+++ +|||+++..... .
T Consensus 88 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~----~ 163 (304)
T 2jam_A 88 VSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----I 163 (304)
T ss_dssp CCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB----T
T ss_pred CCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC----c
Confidence 9999997653 388887653221 1
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....||+.|+|||.+....++.++||||||+++|||++|+.||...... .+..... .+.. .. ... .
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~i~----~~~~-~~-~~~----~ 230 (304)
T 2jam_A 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES---KLFEKIK----EGYY-EF-ESP----F 230 (304)
T ss_dssp THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHHHH----HCCC-CC-CTT----T
T ss_pred cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHH----cCCC-CC-Ccc----c
Confidence 22346899999999999999999999999999999999999998643221 1111111 1110 00 000 0
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.......+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 231 WDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1112245778899999999999999999987
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-26 Score=245.82 Aligned_cols=211 Identities=26% Similarity=0.382 Sum_probs=154.0
Q ss_pred ccccccccccccCCceeEEEEEecC----CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEe-CCeeE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQD----GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVE-REENM 567 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~-~~~~~ 567 (760)
..+|++.+.||+|+||.||+|+..+ ...||+|.+.... ....+.+.+|+.++++++||||+++++++.+ ++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3568889999999999999998542 2368999987543 3345689999999999999999999999654 55789
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCc
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+||||+++|+|.+++ +|||+++.......
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 183 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccch
Confidence 999999999998763 39999986643321
Q ss_pred c--cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCC-CCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 597 Q--AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK-NTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 597 ~--~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
. .......+|+.|+|||.+....++.++||||||+++|||++|.. |+...... ........ +.. .
T Consensus 184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---~~~~~~~~----~~~-----~ 251 (298)
T 3f66_A 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITVYLLQ----GRR-----L 251 (298)
T ss_dssp CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT---THHHHHHT----TCC-----C
T ss_pred hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH---HHHHHHhc----CCC-----C
Confidence 1 12234567889999999999999999999999999999999554 44322211 11111111 100 0
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
..... ....+.+++.+||+.||++|||+.|++++|+++.....
T Consensus 252 ~~~~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 252 LQPEY----CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp CCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred CCCcc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 00111 12457788999999999999999999999999876543
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-27 Score=253.75 Aligned_cols=196 Identities=24% Similarity=0.436 Sum_probs=148.9
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.+.|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35689999999999999999995 5789999999975422 2345789999999999999999999999999999999
Q ss_pred EeccCCCChhhh---------------------------------------------------hccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~ 598 (760)
|||++ |+|.++ |+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~----- 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----- 206 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-----
Confidence 99997 565543 249999876532
Q ss_pred ccceeeeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 599 ATKRLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
.....||+.|+|||++. ...++.++|||||||++|||++|+.|+...... .......... .+.+
T Consensus 207 -~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~------~~~~~~~~~~------~~~~ 273 (348)
T 1u5q_A 207 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQNE------SPAL 273 (348)
T ss_dssp -BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHSC------CCCC
T ss_pred -CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHhcC------CCCC
Confidence 22357899999999985 567999999999999999999999998633221 1111111111 0111
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.... ....+.+++.+||+.||++|||+.++++.
T Consensus 274 ~~~~---~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 274 QSGH---WSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCC---CCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1111 12356778889999999999999999874
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-26 Score=248.98 Aligned_cols=199 Identities=20% Similarity=0.296 Sum_probs=149.2
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV 569 (760)
++|++.+.||+|+||.||+++.. +++.||||++++.. ....+.+.+|..++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57899999999999999999965 68899999997542 23345688999999988 899999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||+++|+|..+| +|||+++...... ..
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~--~~ 166 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DT 166 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT--CC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC--Cc
Confidence 9999999997653 4999998542221 22
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccc--cHHHHHHHhccCCCccccccccccC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFEL--TLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
....+||+.|+|||++....++.++|||||||++|||++|+.||......... ............... .+..
T Consensus 167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~~p~ 240 (345)
T 3a8x_A 167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------RIPR 240 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------CCCT
T ss_pred ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------CCCC
Confidence 34568999999999999999999999999999999999999999642211100 001111111111110 0111
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNM 705 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~ 705 (760)
.....+.+++.+||+.||++||++
T Consensus 241 ----~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 241 ----SLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ----TSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ----CCCHHHHHHHHHHhcCCHhHCCCC
Confidence 122457788899999999999996
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-26 Score=241.70 Aligned_cols=198 Identities=25% Similarity=0.323 Sum_probs=150.6
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
+.++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3467999999999999999999864 5778999998643 22345679999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCccc
Q 004345 569 IYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 569 V~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||||+++++|.+++ +|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~---- 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---- 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc----
Confidence 99999999987652 389988654322
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
......|++.|+|||.+....++.++||||||+++|||++|+.||....... ...... .. ....
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~----~~------~~~~--- 226 (279)
T 3fdn_A 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TYKRIS----RV------EFTF--- 226 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHHH----HT------CCCC---
T ss_pred cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH---HHHHHH----hC------CCCC---
Confidence 1234578999999999999999999999999999999999999986332211 111010 00 0001
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
+......+.+++.+||+.||++|||+.|+++.
T Consensus 227 -~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 227 -PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11112456788899999999999999999973
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-26 Score=245.31 Aligned_cols=200 Identities=24% Similarity=0.355 Sum_probs=156.5
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.+.|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 35689999999999999999985 468899999997543 3456789999999999999999999999999999999999
Q ss_pred ccCCCChhhhh-------------------------------------------------ccccceeEecCCCcccccce
Q 004345 572 YMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 572 y~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
|+++++|.+++ +|||+++.+.... .....
T Consensus 101 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~ 178 (303)
T 3a7i_A 101 YLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNT 178 (303)
T ss_dssp CCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--CCBCC
T ss_pred eCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc--cccCc
Confidence 99999988763 3999998764332 12234
Q ss_pred eeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHH
Q 004345 603 LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 682 (760)
..||+.|+|||.+....++.++||||||+++|||++|+.|+....... ...... ... .+.+....
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~----~~~-----~~~~~~~~--- 243 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK---VLFLIP----KNN-----PPTLEGNY--- 243 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHHHHH----HSC-----CCCCCSSC---
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH---HHHHhh----cCC-----CCCCcccc---
Confidence 578999999999999999999999999999999999999986432211 111111 111 11111112
Q ss_pred HHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 683 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
...+.+++.+||+.||++|||+.++++.
T Consensus 244 -~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 244 -SKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp -CHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred -CHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 2457788899999999999999999874
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-26 Score=252.67 Aligned_cols=154 Identities=18% Similarity=0.270 Sum_probs=127.5
Q ss_pred hccccccccccccC--CceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 493 ATNNFQLANKLGQG--GFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 493 ~~~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
..++|++.++||+| +||.||+|+.. +++.||||+++... ....+.+.+|+.++++++|||||++++++.+++..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 34689999999999 99999999965 78999999997543 334567889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhh----------------------------------------------------ccccceeEecCCC
Q 004345 568 LIYEYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~ 595 (760)
+||||+++|+|.++| +|||++.......
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 999999999998763 3898876543211
Q ss_pred c-----ccccceeeeeccccCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 004345 596 D-----QAATKRLVGTYGYMSPEYAME--GRFSEKSDVFSFGVLLLEIVSGRKNTSFY 646 (760)
Q Consensus 596 ~-----~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSfGv~l~ElltG~~p~~~~ 646 (760)
. ........||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 1 111223478899999999987 57999999999999999999999999643
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-26 Score=249.43 Aligned_cols=213 Identities=22% Similarity=0.276 Sum_probs=145.5
Q ss_pred HhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
...++|++.++||+|+||.||+|+. .+++.||||+++... ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 3457899999999999999999985 478899999997543 2335678899999999999999999999999999999
Q ss_pred EEeccCCCChhhhh-------------------------------------------------------ccccceeEecC
Q 004345 569 IYEYMPNKSLDSFL-------------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 569 V~Ey~~~gsL~~~L-------------------------------------------------------~DFGla~~~~~ 593 (760)
||||+++ +|.+++ +|||+++.+..
T Consensus 111 v~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~ 189 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189 (329)
T ss_dssp EEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred EEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence 9999984 776652 38888876532
Q ss_pred CCcccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc---CCCccc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN---DNNVID 669 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 669 (760)
.. .......||+.|+|||++... .++.++|||||||++|||++|+.||........ ......... ......
T Consensus 190 ~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~ 264 (329)
T 3gbz_A 190 PI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ---LFKIFEVLGLPDDTTWPG 264 (329)
T ss_dssp ------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCTTTSTT
T ss_pred cc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH---HHHHHHHhCCCchhhhhh
Confidence 21 122345689999999999875 489999999999999999999999864332211 111111100 000000
Q ss_pred ------ccc--ccccCCC-----CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 670 ------LVD--PLISESG-----FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 670 ------~~d--~~l~~~~-----~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
... +...... .......+.+++.+||+.||++|||+.|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000 0000000 0001256778999999999999999999986
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.9e-27 Score=252.00 Aligned_cols=208 Identities=22% Similarity=0.252 Sum_probs=139.3
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCC-CCccceeeeEEE--------e
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCV--------E 562 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~--------~ 562 (760)
...+|++.++||+|+||.||+|+. .+++.||||++........+.+.+|+.++.++. ||||+++++++. .
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 346899999999999999999995 478999999987665566678999999999996 999999999995 3
Q ss_pred CCeeEEEEeccCCCChhhhh-------------------------------------------------------ccccc
Q 004345 563 REENMLIYEYMPNKSLDSFL-------------------------------------------------------FDFGL 587 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~L-------------------------------------------------------~DFGl 587 (760)
....++||||+. |+|.++| +|||+
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 345799999996 6765542 38999
Q ss_pred eeEecCCCccc----------ccceeeeeccccCcccc---ccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccH
Q 004345 588 ARIFGGNQDQA----------ATKRLVGTYGYMSPEYA---MEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTL 654 (760)
Q Consensus 588 a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~ 654 (760)
++......... ......||+.|+|||.+ ....++.++|||||||++|||++|+.||.......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~---- 260 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR---- 260 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH----
Confidence 88764322111 11134689999999998 56678999999999999999999999985321110
Q ss_pred HHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 655 LGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 655 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
++...............+.+++.+||+.||++|||+.|+++.|+.+....+
T Consensus 261 ---------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 261 ---------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp --------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ---------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 000000000000111236678899999999999999999999988754433
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-26 Score=245.12 Aligned_cols=201 Identities=22% Similarity=0.291 Sum_probs=155.1
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCc------cchHhHHHHHHHHhcCCCCccceeeeEEEeCCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG------QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~------~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 566 (760)
.++|++.+.||+|+||.||+|+.. +++.||||.+..... ...+.+.+|+.++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 357999999999999999999965 688999999975422 1356799999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhh------------------------------------------------------ccccceeEec
Q 004345 567 MLIYEYMPNKSLDSFL------------------------------------------------------FDFGLARIFG 592 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~ 592 (760)
++||||+++++|.++| +|||+++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~ 170 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence 9999999999998763 3899888764
Q ss_pred CCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
... ......||+.|+|||.+....++.++||||||+++|||++|+.||...... ...... ..... ..+
T Consensus 171 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~i----~~~~~--~~~ 238 (321)
T 2a2a_A 171 DGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---ETLANI----TSVSY--DFD 238 (321)
T ss_dssp TTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHHHH----HTTCC--CCC
T ss_pred ccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH---HHHHHH----Hhccc--ccC
Confidence 322 223457899999999999999999999999999999999999998643221 111111 01000 001
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+..... ....+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 239 EEFFSH----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHTT----CCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred hhhhcc----cCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111111 1245778899999999999999999987
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=9.9e-26 Score=242.69 Aligned_cols=217 Identities=21% Similarity=0.321 Sum_probs=153.8
Q ss_pred HhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcC--CCCccceeeeEEEeC----Ce
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNL--QHRNLVRLLGCCVER----EE 565 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l--~H~nIv~l~g~~~~~----~~ 565 (760)
...++|++.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++..+ +||||+++++++... ..
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 34578999999999999999999975 899999998533 344566677766654 899999999999987 68
Q ss_pred eEEEEeccCCCChhhhh---------------------------------------------------------ccccce
Q 004345 566 NMLIYEYMPNKSLDSFL---------------------------------------------------------FDFGLA 588 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L---------------------------------------------------------~DFGla 588 (760)
.++||||+++|+|.++| +|||++
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence 89999999999998763 389998
Q ss_pred eEecCCCccc--ccceeeeeccccCccccccCCCCcc------chhHHHHHHHHHHHhC----------CCCCCCCcccc
Q 004345 589 RIFGGNQDQA--ATKRLVGTYGYMSPEYAMEGRFSEK------SDVFSFGVLLLEIVSG----------RKNTSFYHEEF 650 (760)
Q Consensus 589 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k------sDVwSfGv~l~ElltG----------~~p~~~~~~~~ 650 (760)
+.+....... ......||+.|+|||++.....+.+ +|||||||++|||++| +.|+.......
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 7764332221 1224579999999999987776665 9999999999999999 44543222111
Q ss_pred cccHHHHHHHhccCCCccccccccccCC-CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 651 ELTLLGYAWKLWNDNNVIDLVDPLISES-GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
. .. ............ .+.+... ........+.+++.+||+.||++|||+.||++.|+++.++
T Consensus 270 ~-~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 270 P-SY-EDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp C-CH-HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred C-ch-hhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 1 00 111111111111 1111111 1124567788999999999999999999999999987643
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-26 Score=241.38 Aligned_cols=214 Identities=19% Similarity=0.286 Sum_probs=155.6
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEE-EeCCeeEEEE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCC-VEREENMLIY 570 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~-~~~~~~~lV~ 570 (760)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+.++++++|++++..++.+ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 357899999999999999999995 578899999875432 335688999999999988877777666 5677889999
Q ss_pred eccCCCChhhhh------------------------------------------------------ccccceeEecCCCc
Q 004345 571 EYMPNKSLDSFL------------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 571 Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~~ 596 (760)
||+ +++|.+++ +|||+++.......
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 999 89987762 39999987654322
Q ss_pred c-----cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccc
Q 004345 597 Q-----AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 597 ~-----~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (760)
. .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........................
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI---- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh----
Confidence 1 1223467899999999999999999999999999999999999999754333222222111111000000
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
+.+.... ...+.+++.+||+.||++|||+.+|+++|+++..+
T Consensus 240 -~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 240 -EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp -HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred -hhhhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 0000111 24677889999999999999999999999987654
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-27 Score=254.62 Aligned_cols=159 Identities=24% Similarity=0.359 Sum_probs=131.8
Q ss_pred cccccCHHHHHHhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCC-----CCccc
Q 004345 481 DLLVFNFEELANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-----HRNLV 554 (760)
Q Consensus 481 ~~~~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-----H~nIv 554 (760)
+...+++++.....++|++.++||+|+||.||+|+. .+++.||||+++.. ....+.+.+|+.++.+++ ||||+
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 344566666666788999999999999999999996 46889999999642 334567888999999886 99999
Q ss_pred eeeeEEEeCCeeEEEEeccCCCChhhhh----------------------------------------------------
Q 004345 555 RLLGCCVEREENMLIYEYMPNKSLDSFL---------------------------------------------------- 582 (760)
Q Consensus 555 ~l~g~~~~~~~~~lV~Ey~~~gsL~~~L---------------------------------------------------- 582 (760)
++++++...+..++||||+ +++|.+++
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~ 178 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKS 178 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEE
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccccc
Confidence 9999999999999999999 88886652
Q ss_pred -------------------------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHH
Q 004345 583 -------------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIV 637 (760)
Q Consensus 583 -------------------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ell 637 (760)
+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 253 (360)
T 3llt_A 179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253 (360)
T ss_dssp EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred ccchhcccccccccccccCCCCEEEEeccCceecCC-----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence 26777765322 122457899999999999999999999999999999999
Q ss_pred hCCCCCCCC
Q 004345 638 SGRKNTSFY 646 (760)
Q Consensus 638 tG~~p~~~~ 646 (760)
+|+.||...
T Consensus 254 ~g~~pf~~~ 262 (360)
T 3llt_A 254 TGSLLFRTH 262 (360)
T ss_dssp HSSCSCCCS
T ss_pred HCCCCCCCC
Confidence 999999643
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-27 Score=251.85 Aligned_cols=199 Identities=25% Similarity=0.335 Sum_probs=153.5
Q ss_pred HhccccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCee
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~ 566 (760)
...++|++.+.||+|+||.||+|+.. +++.||||++++.. ....+.+.+|..++.++ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578999999999999999999965 68899999997542 34556788999999876 899999999999999999
Q ss_pred EEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCc
Q 004345 567 MLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~ 596 (760)
++||||+++|+|..+| +|||+++......
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 172 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD- 172 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC-
Confidence 9999999999998763 4999998643221
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+..... .+. +.+.
T Consensus 173 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~i~----~~~------~~~p 238 (345)
T 1xjd_A 173 -AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE---ELFHSIR----MDN------PFYP 238 (345)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH----HCC------CCCC
T ss_pred -CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHH----hCC------CCCC
Confidence 2234568999999999999999999999999999999999999998643221 1111110 110 0111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHH-HHH
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMP-TVV 709 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~-ev~ 709 (760)
.. ....+.+++.+||+.||++||++. +|+
T Consensus 239 ~~----~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 239 RW----LEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp TT----SCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred cc----cCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11 124567888999999999999997 665
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-26 Score=257.72 Aligned_cols=200 Identities=20% Similarity=0.323 Sum_probs=156.0
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 67999999999999999999965 78999999997532 234567999999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++|+|.++| +|||+++...... ..
T Consensus 96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~---~~ 172 (476)
T 2y94_A 96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FL 172 (476)
T ss_dssp ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC---CB
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc---cc
Confidence 999999998763 3999998764332 22
Q ss_pred ceeeeeccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRF-SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
...+||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .+.... ..+.. .....
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---~~~~~i----~~~~~------~~p~~- 238 (476)
T 2y94_A 173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP---TLFKKI----CDGIF------YTPQY- 238 (476)
T ss_dssp CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH---HHHHHH----HTTCC------CCCTT-
T ss_pred cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH---HHHHHH----hcCCc------CCCcc-
Confidence 34579999999999988765 68999999999999999999998643221 111111 11110 00011
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH--HHhc
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS--MLNS 714 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~--~L~~ 714 (760)
....+.+++.+||+.||++|||+.||++ .+..
T Consensus 239 ---~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~ 272 (476)
T 2y94_A 239 ---LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272 (476)
T ss_dssp ---CCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred ---CCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence 1235778889999999999999999987 4444
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-26 Score=239.50 Aligned_cols=200 Identities=22% Similarity=0.292 Sum_probs=151.5
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCc------cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG------QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~------~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
++|++.+.||+|+||.||+++.. +++.||||.++.... ...+.+.+|+.++++++||||+++++++......+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 57999999999999999999975 689999999875321 23678999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhh------------------------------------------------------ccccceeEecC
Q 004345 568 LIYEYMPNKSLDSFL------------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~ 593 (760)
+||||+++++|.+++ +|||+++....
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~ 164 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 164 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence 999999999998763 38888876533
Q ss_pred CCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
.. ......|++.|+|||.+....++.++||||||+++|||++|+.||....... ..... ..... ..++
T Consensus 165 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~----~~~~~--~~~~ 232 (283)
T 3bhy_A 165 GN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE---TLTNI----SAVNY--DFDE 232 (283)
T ss_dssp ----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHH----HTTCC--CCCH
T ss_pred CC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH---HHHHh----Hhccc--CCcc
Confidence 22 1223568999999999999999999999999999999999999986432211 11100 00000 0000
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..... ....+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 233 EYFSN----TSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHTT----CCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhccc----CCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 00011 1245778899999999999999999987
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.9e-27 Score=250.94 Aligned_cols=215 Identities=21% Similarity=0.313 Sum_probs=147.4
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57999999999999999999965 788999999975432 2233567899999999999999999999999999999999
Q ss_pred cCCCChhhh---------------------------------------------------hccccceeEecCCCcccccc
Q 004345 573 MPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 573 ~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~~~ 601 (760)
++ |+|.++ |+|||+++...... ....
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~~ 158 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--KTYD 158 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC----------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--cccc
Confidence 98 466554 24999998653221 2223
Q ss_pred eeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc---CCCcccccc-----
Q 004345 602 RLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN---DNNVIDLVD----- 672 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d----- 672 (760)
...||+.|+|||.+.+ ..++.++|||||||++|||++|+.||........ ......... .........
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ---LHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChHhchhhhcchhhc
Confidence 4578999999999876 5689999999999999999999999975433221 111111111 111111100
Q ss_pred ----ccccCCC----CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH--HHhcc
Q 004345 673 ----PLISESG----FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS--MLNSE 715 (760)
Q Consensus 673 ----~~l~~~~----~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~--~L~~~ 715 (760)
+...... .......+.+++.+||+.||++|||+.|+++ .+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 288 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL 288 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhc
Confidence 0000000 0011245678999999999999999999988 34444
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.9e-26 Score=240.09 Aligned_cols=198 Identities=25% Similarity=0.377 Sum_probs=133.0
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46799999999999999999996 578999999996432 23457899999999999999999999999999999999
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
|||+++++|.+++ +|||+++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-- 167 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE-- 167 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC--
Confidence 9999999987763 39999887642221
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
......||+.|+|||.+....++.++||||||+++|||++|+.||......... .... .. +..+..
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~~-~~------~~~~~~- 233 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------NKVV-LA------DYEMPS- 233 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CC-SS------CCCCCT-
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------HHHh-hc------ccCCcc-
Confidence 122357899999999999889999999999999999999999998643221100 0000 00 001111
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.....+.+++.+||+.||++|||+.++++
T Consensus 234 ---~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 234 ---FLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ---TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 11245678899999999999999999876
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-26 Score=252.92 Aligned_cols=213 Identities=22% Similarity=0.325 Sum_probs=153.3
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.++|++.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 367999999999999999999965 68899999997542 3345679999999999999999999999999999999999
Q ss_pred ccCCCChhhhh---------------------------------------------------ccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|+++++|.+++ +|||+++.... ...
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~ 187 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMA 187 (360)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH----HC-
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc----ccc
Confidence 99999998763 38888764421 122
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHH-----------------------H
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLG-----------------------Y 657 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~-----------------------~ 657 (760)
....||+.|+|||.+....++.++|||||||++|||++|+.||............. +
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccc
Confidence 34578999999999999999999999999999999999999986433221100000 0
Q ss_pred HHHhccCCCccccccccccC----CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 658 AWKLWNDNNVIDLVDPLISE----SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 658 ~~~~~~~~~~~~~~d~~l~~----~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...........+.++..... .........+.+++.+||+.||++|||+.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00000000001111110000 000111245778999999999999999999987
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-26 Score=254.95 Aligned_cols=212 Identities=21% Similarity=0.248 Sum_probs=158.6
Q ss_pred cCHHHHHHhccccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEE
Q 004345 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCC 560 (760)
Q Consensus 485 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~ 560 (760)
+.++++....++|++.++||+|+||.||+++.. +++.||||++++.. ....+.+.+|..++.+++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 445666667889999999999999999999964 78999999997532 23445689999999999999999999999
Q ss_pred EeCCeeEEEEeccCCCChhhhh---------------------------------------------------cccccee
Q 004345 561 VEREENMLIYEYMPNKSLDSFL---------------------------------------------------FDFGLAR 589 (760)
Q Consensus 561 ~~~~~~~lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~ 589 (760)
.+.+..+|||||+++|+|.++| +|||+++
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~ 210 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCL 210 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhhe
Confidence 9999999999999999998763 3999998
Q ss_pred EecCCCcccccceeeeeccccCccccc-------cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhc
Q 004345 590 IFGGNQDQAATKRLVGTYGYMSPEYAM-------EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLW 662 (760)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 662 (760)
.+..... ......+||+.|||||++. ...++.++|||||||++|||++|+.||....... ..... .
T Consensus 211 ~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~---~~~~i---~ 283 (412)
T 2vd5_A 211 KLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE---TYGKI---V 283 (412)
T ss_dssp ECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHH---H
T ss_pred eccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH---HHHHH---H
Confidence 7653322 1223468999999999997 3568999999999999999999999996432211 11111 0
Q ss_pred cCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCC---CCHHHHHH
Q 004345 663 NDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDR---PNMPTVVS 710 (760)
Q Consensus 663 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~R---Pt~~ev~~ 710 (760)
.... ...-+..... ....+.+++.+||+ +|++| |++.||++
T Consensus 284 ~~~~--~~~~p~~~~~----~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 284 HYKE--HLSLPLVDEG----VPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp THHH--HCCCC----C----CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred hccc--CcCCCccccC----CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 0000 0000111111 12457788889999 99998 68999876
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-26 Score=244.89 Aligned_cols=207 Identities=28% Similarity=0.401 Sum_probs=147.5
Q ss_pred ccccccccccccCCceeEEEEEec--CCc--EEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ--DGQ--EIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 566 (760)
.++|++.+.||+|+||.||+|+.. +++ .||||+++.. .....+.+.+|+.++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 367999999999999999999853 233 6999998754 2344578999999999999999999999998755 8
Q ss_pred EEEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCC
Q 004345 567 MLIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~ 595 (760)
++|+||+++++|.+++ +|||+++......
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 175 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccc
Confidence 8999999999998753 3999998765433
Q ss_pred cc-cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 596 DQ-AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 596 ~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
.. .......+|..|+|||.+....++.++||||||+++|||++ |+.||...... .............
T Consensus 176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~~----- 244 (291)
T 1u46_A 176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------QILHKIDKEGERL----- 244 (291)
T ss_dssp CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTSCCCC-----
T ss_pred cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH------HHHHHHHccCCCC-----
Confidence 22 12233567889999999998889999999999999999999 99998643221 1111111111100
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
. ........+.+++.+||+.||++|||+.++++.|++..
T Consensus 245 ~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 245 P----RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred C----CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 0 01112246778999999999999999999999998874
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-26 Score=260.53 Aligned_cols=198 Identities=23% Similarity=0.277 Sum_probs=144.5
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.+.||+|+||.||+|+. .+++.||||++... .......+.+|+.++++++||||+++++++...+..+||
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999995 46889999999753 334456788999999999999999999999999999999
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
|||+++|+|..+| +|||+++..... ..
T Consensus 227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~ 304 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GA 304 (446)
T ss_dssp ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC--Cc
Confidence 9999999997653 499998753222 12
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
.....+||+.|+|||++....++.++|||||||++|||++|+.||...... .+.... ... .. .+...
T Consensus 305 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~i---~~~-~~------~~p~~ 371 (446)
T 4ejn_A 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFELI---LME-EI------RFPRT 371 (446)
T ss_dssp --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH---HHC-CC------CCCTT
T ss_pred ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---HHHHHH---HhC-CC------CCCcc
Confidence 233468999999999999999999999999999999999999998643221 111111 100 00 01111
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
....+.+++.+||+.||.+|| ++.|+++
T Consensus 372 ----~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 372 ----LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ----SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 124577889999999999999 9999986
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-26 Score=250.76 Aligned_cols=201 Identities=17% Similarity=0.244 Sum_probs=152.2
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.++|++.+.||+|+||.||+|... +++.||||++++.. ..+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 467999999999999999999965 68899999996543 2356788888887 79999999999999999999999
Q ss_pred ccCCCChhhhh------------------------------------------------------ccccceeEecCCCcc
Q 004345 572 YMPNKSLDSFL------------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 572 y~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
|+++|+|.++| +|||+++.+.....
T Consensus 97 ~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~- 175 (342)
T 2qr7_A 97 LMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG- 175 (342)
T ss_dssp CCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC-
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC-
Confidence 99999997753 39999987643322
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
.....+||+.|+|||++....++.++|||||||++|||++|+.||.....+....+.... ..+... +..
T Consensus 176 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i----~~~~~~------~~~ 244 (342)
T 2qr7_A 176 -LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI----GSGKFS------LSG 244 (342)
T ss_dssp -CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHH----HHCCCC------CCS
T ss_pred -ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHH----ccCCcc------cCc
Confidence 223467899999999998888999999999999999999999999643222111111111 111110 000
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.........+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 245 GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 011112245778889999999999999999987
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-26 Score=238.46 Aligned_cols=200 Identities=21% Similarity=0.304 Sum_probs=155.1
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 67999999999999999999965 5788999998643 2234567999999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++++|.+++ +|||++....... .
T Consensus 94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~----~ 169 (284)
T 2vgo_A 94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----R 169 (284)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC----B
T ss_pred EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccc----c
Confidence 999999997653 3999987653221 2
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....|++.|+|||.+....++.++||||||+++|||++|+.||....... ...... ... ..+..
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~-~~~------~~~~~--- 233 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------THRRIV-NVD------LKFPP--- 233 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHH-TTC------CCCCT---
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH------HHHHHh-ccc------cCCCC---
Confidence 34578999999999999999999999999999999999999986432211 111111 110 01111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHH--HHhcc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS--MLNSE 715 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~--~L~~~ 715 (760)
.....+.+++.+|++.||++|||+.++++ .+...
T Consensus 234 -~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 234 -FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp -TSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred -cCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 11245678889999999999999999987 44443
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-26 Score=257.48 Aligned_cols=215 Identities=18% Similarity=0.215 Sum_probs=147.9
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeC------C
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER------E 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~------~ 564 (760)
.++|++.++||+|+||.||+|.. .+++.||||++... .....+++.+|+.++++++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 47899999999999999999985 46889999999754 234456789999999999999999999999655 3
Q ss_pred eeEEEEeccCCCChhhh-----------------------------------------------hccccceeEecCCCcc
Q 004345 565 ENMLIYEYMPNKSLDSF-----------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~-----------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
..+|||||++++.+..+ |+|||+++.....
T Consensus 141 ~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 217 (464)
T 3ttj_A 141 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--- 217 (464)
T ss_dssp EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----C---
T ss_pred eEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC---
Confidence 56999999987633221 2599999876432
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHH----------------HHHh
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGY----------------AWKL 661 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~----------------~~~~ 661 (760)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.. ....
T Consensus 218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~ 297 (464)
T 3ttj_A 218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 297 (464)
T ss_dssp CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHH
T ss_pred cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhH
Confidence 123346899999999999999999999999999999999999999964332211111000 0000
Q ss_pred ccCC------CccccccccccCCC---CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 662 WNDN------NVIDLVDPLISESG---FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 662 ~~~~------~~~~~~d~~l~~~~---~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.... .........+.... .......+.+++.+||+.||++|||+.|+++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 298 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 00000000000000 01124568899999999999999999999873
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.6e-26 Score=244.21 Aligned_cols=217 Identities=21% Similarity=0.305 Sum_probs=159.3
Q ss_pred HHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhc--CCCCccceeeeEEEeCC----
Q 004345 491 ANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISN--LQHRNLVRLLGCCVERE---- 564 (760)
Q Consensus 491 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~--l~H~nIv~l~g~~~~~~---- 564 (760)
....++|++.+.||+|+||.||+|+. +++.||||++... ..+.+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 33457899999999999999999998 4899999998643 45678899999887 79999999999998876
Q ss_pred eeEEEEeccCCCChhhhh---------------------------------------------------------ccccc
Q 004345 565 ENMLIYEYMPNKSLDSFL---------------------------------------------------------FDFGL 587 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L---------------------------------------------------------~DFGl 587 (760)
..++||||+++|+|.++| +|||+
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 193 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 193 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred eeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCC
Confidence 789999999999997753 38999
Q ss_pred eeEecCCCccc--ccceeeeeccccCccccccCC------CCccchhHHHHHHHHHHHhC----------CCCCCCCccc
Q 004345 588 ARIFGGNQDQA--ATKRLVGTYGYMSPEYAMEGR------FSEKSDVFSFGVLLLEIVSG----------RKNTSFYHEE 649 (760)
Q Consensus 588 a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~------~s~ksDVwSfGv~l~ElltG----------~~p~~~~~~~ 649 (760)
++......... ......||+.|+|||.+.... ++.++|||||||++|||++| ..||......
T Consensus 194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 273 (342)
T 1b6c_B 194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 273 (342)
T ss_dssp CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC
Confidence 88765433221 223457999999999997653 34789999999999999999 5666432211
Q ss_pred ccccHHHHHHHhccCCCccccccccccCC-CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 650 FELTLLGYAWKLWNDNNVIDLVDPLISES-GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
. ..... .......... .+.+... ........+.+++.+||+.||++|||+.+|+++|+++.+
T Consensus 274 ~-~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 274 D-PSVEE-MRKVVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp S-CCHHH-HHHHHTTSCC----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred c-ccHHH-HHHHHHHHHh----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 1 11111 1111111111 1111111 123456778899999999999999999999999988754
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-26 Score=255.93 Aligned_cols=153 Identities=29% Similarity=0.534 Sum_probs=115.2
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCC-CCccceeeeEEEeCC--ee
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVERE--EN 566 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~--~~ 566 (760)
..++|++.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.++.++. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 357899999999999999999985 47899999998643 2344567889999999997 999999999998654 68
Q ss_pred EEEEeccCCCChhhh-------------------------------------------------hccccceeEecCCC--
Q 004345 567 MLIYEYMPNKSLDSF-------------------------------------------------LFDFGLARIFGGNQ-- 595 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~-------------------------------------------------L~DFGla~~~~~~~-- 595 (760)
++|||||+ ++|..+ |+|||+|+.+....
T Consensus 87 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 165 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRV 165 (388)
T ss_dssp EEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCC
T ss_pred EEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccc
Confidence 99999998 577654 24999998764211
Q ss_pred -----------------cccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 004345 596 -----------------DQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFY 646 (760)
Q Consensus 596 -----------------~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~ 646 (760)
........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 166 TNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp CCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 0112234579999999999986 67999999999999999999999999644
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-26 Score=246.10 Aligned_cols=217 Identities=19% Similarity=0.285 Sum_probs=151.5
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEe--------
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVE-------- 562 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~-------- 562 (760)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36899999999999999999996 578999999986543 2335678999999999999999999999987
Q ss_pred CCeeEEEEeccCCCChhhh---------------------------------------------------hccccceeEe
Q 004345 563 REENMLIYEYMPNKSLDSF---------------------------------------------------LFDFGLARIF 591 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~ 591 (760)
.+..++||||+++ +|... |+|||+++.+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 174 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF 174 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence 3468999999985 44332 2499999876
Q ss_pred cCCCc--ccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcc
Q 004345 592 GGNQD--QAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVI 668 (760)
Q Consensus 592 ~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (760)
..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.............
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 254 (351)
T 3mi9_A 175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 254 (351)
T ss_dssp CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence 43221 122234578999999999876 458999999999999999999999987543322221111111111110000
Q ss_pred --------ccccccccCCCC-HHH------HHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 669 --------DLVDPLISESGF-KME------IIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 669 --------~~~d~~l~~~~~-~~~------~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
+.+......... ... ...+.+++.+||+.||++|||+.|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 255 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000000001 111 1347789999999999999999999873
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-26 Score=245.08 Aligned_cols=205 Identities=28% Similarity=0.399 Sum_probs=152.2
Q ss_pred cccccccccccCCceeEEEEEec-CCcE--EEEEEeccc-CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQE--IAVKRLSKA-SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV 569 (760)
++|++.+.||+|+||.||+|+.. ++.. ||||.+... .....+.+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57889999999999999999964 4554 599988753 334566799999999999 899999999999999999999
Q ss_pred EeccCCCChhhhh------------------------------------------------------------------c
Q 004345 570 YEYMPNKSLDSFL------------------------------------------------------------------F 583 (760)
Q Consensus 570 ~Ey~~~gsL~~~L------------------------------------------------------------------~ 583 (760)
|||+++++|.++| +
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~ 184 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 184 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEc
Confidence 9999999986642 3
Q ss_pred cccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhc
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLW 662 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 662 (760)
|||+++.... ........+++.|+|||.+....++.++||||||+++|||++ |+.||...... . .....
T Consensus 185 Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~-~~~~~ 254 (327)
T 1fvr_A 185 DFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------E-LYEKL 254 (327)
T ss_dssp CTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------H-HHHHG
T ss_pred ccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH------H-HHHHh
Confidence 8998874321 112223456889999999998889999999999999999998 99998643221 1 11111
Q ss_pred cCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 663 NDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 663 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
..+.. . ..+......+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus 255 ~~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 255 PQGYR-----L----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp GGTCC-----C----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred hcCCC-----C----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11110 0 01111224577889999999999999999999999987654
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-26 Score=257.58 Aligned_cols=200 Identities=23% Similarity=0.333 Sum_probs=150.1
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
.++|++.++||+|+||.||+|+.. +++.||||++.+.. ....+.+.+|+.++++++|||||++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999965 68899999997542 344678999999999999999999999999999999999
Q ss_pred eccCCCChhhhh-----------------------------------------------------ccccceeEecCCCcc
Q 004345 571 EYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 571 Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||+++|+|.+++ +|||+++.+....
T Consensus 116 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~-- 193 (494)
T 3lij_A 116 ECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK-- 193 (494)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB--
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc--
Confidence 999999997642 3999998765332
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......||+.|+|||++. ..++.++||||+||++|||++|+.||...... .+..... .+.. ....+.. .
T Consensus 194 -~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~----~~~~-~~~~~~~-~ 262 (494)
T 3lij_A 194 -KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ---EILRKVE----KGKY-TFDSPEW-K 262 (494)
T ss_dssp -CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH----HTCC-CCCSGGG-T
T ss_pred -cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHH----hCCC-CCCchhc-c
Confidence 223467999999999876 56999999999999999999999998643221 1111111 1110 0000110 0
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.....+.+++.+||+.||.+|||+.|+++
T Consensus 263 ----~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 263 ----NVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp ----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----cCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 11245678889999999999999999986
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-26 Score=246.47 Aligned_cols=223 Identities=23% Similarity=0.367 Sum_probs=157.0
Q ss_pred HHHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCC
Q 004345 487 FEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE 564 (760)
Q Consensus 487 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~ 564 (760)
.+++....++|++.+.||+|+||.||+|+... .+|+|+++.. .....+.|.+|+.++++++||||+++++++...+
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 34455567889999999999999999998753 5999998753 2344567889999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCC
Q 004345 565 ENMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGN 594 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~ 594 (760)
..++||||+++++|.+++ +|||+++.....
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVL 182 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC-----
T ss_pred ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecCCccccccc
Confidence 999999999999998763 399988765321
Q ss_pred Cc---ccccceeeeeccccCcccccc---------CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhc
Q 004345 595 QD---QAATKRLVGTYGYMSPEYAME---------GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLW 662 (760)
Q Consensus 595 ~~---~~~~~~~~gt~~y~aPE~~~~---------~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 662 (760)
.. ........|++.|+|||.+.. ..++.++||||||+++|||++|+.||.....+. . ....
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~---~~~~- 255 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA---I---IWQM- 255 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH---H---HHHH-
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---H---HHHh-
Confidence 11 112233468999999999874 458899999999999999999999986432211 1 1111
Q ss_pred cCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCCCCCCCc
Q 004345 663 NDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPA 726 (760)
Q Consensus 663 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~~p~~p~ 726 (760)
..+........ .. ...+.+++.+||+.||++|||+.+|+++|+++.+.......|+
T Consensus 256 ~~~~~~~~~~~----~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~~ 311 (319)
T 2y4i_B 256 GTGMKPNLSQI----GM----GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPG 311 (319)
T ss_dssp HTTCCCCCCCS----SC----CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----------
T ss_pred ccCCCCCCCcC----CC----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCCCc
Confidence 11111111100 11 1346788899999999999999999999998865544444443
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-26 Score=248.38 Aligned_cols=215 Identities=16% Similarity=0.160 Sum_probs=156.4
Q ss_pred ccccccccccccCCceeEEEEEecC---------CcEEEEEEecccCccchHhHHHHHHHHhcCCCCccce---------
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQD---------GQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR--------- 555 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~--------- 555 (760)
.++|++.+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999653 789999998643 47889999999999999998
Q ss_pred ------eeeEEEe-CCeeEEEEeccCCCChhhhh----------------------------------------------
Q 004345 556 ------LLGCCVE-REENMLIYEYMPNKSLDSFL---------------------------------------------- 582 (760)
Q Consensus 556 ------l~g~~~~-~~~~~lV~Ey~~~gsL~~~L---------------------------------------------- 582 (760)
+++++.. +...++||||+ +++|.++|
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDP 194 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEET
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcC
Confidence 6777776 67889999999 99998763
Q ss_pred --------ccccceeEecCCCcc-----cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCccc
Q 004345 583 --------FDFGLARIFGGNQDQ-----AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEE 649 (760)
Q Consensus 583 --------~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~ 649 (760)
+|||+++.+...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 399999876432211 1112347999999999999999999999999999999999999998643311
Q ss_pred ccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 650 FELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
.. .+........ .....+.+....... ....+.+++.+||+.||++|||+.+|+++|+++.+...
T Consensus 275 ~~-~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 275 TE-DIMKQKQKFV--DKPGPFVGPCGHWIR---PSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp HH-HHHHHHHHHH--HSCCCEECTTSCEEC---CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HH-HHHHHHHhcc--CChhhhhhhccccCC---CcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 11 1111111110 111111111110001 12457788889999999999999999999998765443
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4e-26 Score=241.95 Aligned_cols=202 Identities=21% Similarity=0.372 Sum_probs=147.6
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
..++|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3467999999999999999999975 588999999987666677899999999999999999999999999999999999
Q ss_pred ccCCCChhhhh---------------------------------------------------ccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|+++++|..++ +|||++...... ....
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~ 174 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--LQKR 174 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--HHC-
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--cccc
Confidence 99999997652 377776432111 1112
Q ss_pred ceeeeeccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 601 KRLVGTYGYMSPEYAM-----EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
....||+.|+|||.+. ...++.++||||||+++|||++|+.|+...... ......... .......
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~-~~~~~~~--- 244 (302)
T 2j7t_A 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKIAKS-DPPTLLT--- 244 (302)
T ss_dssp ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHS-CCCCCSS---
T ss_pred ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH------HHHHHHhcc-CCcccCC---
Confidence 2357899999999983 667899999999999999999999998643221 111111111 1000000
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+......+.+++.+||+.||++|||+.++++
T Consensus 245 ----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 ----PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ----GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ----ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1111245778899999999999999999876
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=7.2e-26 Score=243.22 Aligned_cols=208 Identities=17% Similarity=0.312 Sum_probs=153.2
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCC-CCccceeeeEEEe--CCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVE--REENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~--~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+|+. .+++.||||+++. ...+.+.+|+.++++++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 6799999999999999999985 5789999999863 34578999999999997 9999999999988 66789999
Q ss_pred eccCCCChhhhh------------------------------------------------ccccceeEecCCCcccccce
Q 004345 571 EYMPNKSLDSFL------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 571 Ey~~~gsL~~~L------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
||+++++|.+++ +|||+++....... ...
T Consensus 113 e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~ 189 (330)
T 3nsz_A 113 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE---YNV 189 (330)
T ss_dssp ECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC---CCS
T ss_pred eccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc---ccc
Confidence 999999987652 49999987643322 233
Q ss_pred eeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCc--------------
Q 004345 603 LVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNV-------------- 667 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 667 (760)
..|+..|+|||.+.. ..++.++|||||||++|||++|+.||........ ..............
T Consensus 190 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (330)
T 3nsz_A 190 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD--QLVRIAKVLGTEDLYDYIDKYNIELDPR 267 (330)
T ss_dssp CCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH--HHHHHHHHHCHHHHHHHHHHTTCCCCTH
T ss_pred ccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH--HHHHHHHhcCCchhhhHHHHhccccccc
Confidence 578999999999987 6799999999999999999999999854322211 00000000000000
Q ss_pred -cc--------cccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 668 -ID--------LVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 668 -~~--------~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+ .................+.+++.+||+.||++|||+.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 00001111111112356788999999999999999999987
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.3e-27 Score=249.23 Aligned_cols=211 Identities=22% Similarity=0.347 Sum_probs=150.9
Q ss_pred CHHHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccC--ccchHhHHHHHHHHhcCC--CCccceeeeEEE
Q 004345 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQ--HRNLVRLLGCCV 561 (760)
Q Consensus 486 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~--H~nIv~l~g~~~ 561 (760)
.+..+....++|++.+.||+|+||.||++...+++.||||++.... ....+.+.+|+.++.+++ ||||+++++++.
T Consensus 19 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~ 98 (313)
T 3cek_A 19 YFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 98 (313)
T ss_dssp -CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE
T ss_pred CeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee
Confidence 3344445567899999999999999999998889999999986432 334578999999999997 599999999999
Q ss_pred eCCeeEEEEeccCCCChhhhh-------------------------------------------------ccccceeEec
Q 004345 562 EREENMLIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFG 592 (760)
Q Consensus 562 ~~~~~~lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~ 592 (760)
..+..++||| +.+++|.++| +|||+++.+.
T Consensus 99 ~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 99 TDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ 177 (313)
T ss_dssp CSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCC--
T ss_pred cCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeecccccccc
Confidence 9999999999 5678887653 4999998764
Q ss_pred CCCcccccceeeeeccccCcccccc-----------CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHh
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAME-----------GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL 661 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~ 661 (760)
............||+.|+|||.+.. ..++.++||||||+++|||++|+.||...... .......
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----~~~~~~~ 252 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAI 252 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHH
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-----HHHHHHH
Confidence 3332223334578999999999875 47889999999999999999999998633221 1111111
Q ss_pred ccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 662 WNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 662 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
...... ...+......+.+++.+||+.||++|||+.|+++.
T Consensus 253 ~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 253 IDPNHE---------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HCTTSC---------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Hhcccc---------cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111110 01111112457788899999999999999999873
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9e-26 Score=257.88 Aligned_cols=202 Identities=23% Similarity=0.317 Sum_probs=156.0
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
..++|++.+.||+|+||.||+|+.. +++.||||++.+. .......+.+|+.+|++++|||||++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3467999999999999999999964 7899999999753 23445678999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh----------------------------------------------------ccccceeEecCCCc
Q 004345 569 IYEYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 569 V~Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~ 596 (760)
||||+++|+|..+| +|||+++.+.....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 99999999997653 49999987643322
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
....+||+.|+|||++....++.++|||||||++|||++|+.||...........+ ........ ..+
T Consensus 342 ---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i---~~~i~~~~------~~~- 408 (576)
T 2acx_A 342 ---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV---ERLVKEVP------EEY- 408 (576)
T ss_dssp ---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHH---HHHHHHCC------CCC-
T ss_pred ---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHH---HHHhhccc------ccC-
Confidence 23458999999999999989999999999999999999999999643322111111 11100000 001
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
+......+.+++.+||+.||.+|| ++.||++
T Consensus 409 ---p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 409 ---SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ---CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ---CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 111124577888999999999999 7788875
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-26 Score=253.00 Aligned_cols=202 Identities=19% Similarity=0.300 Sum_probs=143.7
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--------ccchHhHHHHHHHHhcCCCCccceeeeEEEeC
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--------GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER 563 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--------~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~ 563 (760)
..++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+|++++||||+++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 3578999999999999999999864 67899999987431 122346899999999999999999999975 5
Q ss_pred CeeEEEEeccCCCChhhhh-----------------------------------------------------ccccceeE
Q 004345 564 EENMLIYEYMPNKSLDSFL-----------------------------------------------------FDFGLARI 590 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~ 590 (760)
+..++||||+++|+|.+++ +|||+++.
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~ 291 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccccee
Confidence 5689999999999997763 38999886
Q ss_pred ecCCCcccccceeeeeccccCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCc
Q 004345 591 FGGNQDQAATKRLVGTYGYMSPEYAME---GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (760)
.... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||...... ..+..... .+..
T Consensus 292 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--~~~~~~i~----~~~~ 362 (419)
T 3i6u_A 292 LGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSLKDQIT----SGKY 362 (419)
T ss_dssp CC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS--CCHHHHHH----TTCC
T ss_pred cCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch--HHHHHHHh----cCCC
Confidence 5422 22334679999999999863 66889999999999999999999998643222 11111111 1110
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
... +.... .....+.+++.+||+.||++|||+.|+++
T Consensus 363 -~~~-~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 363 -NFI-PEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp -CCC-HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -CCC-chhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 000 00000 11246778999999999999999999987
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-26 Score=247.18 Aligned_cols=199 Identities=23% Similarity=0.305 Sum_probs=153.1
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~ 567 (760)
..++|++.+.||+|+||.||+|+.. +++.||||++++. .....+.+.+|..++..+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3468999999999999999999975 4789999999754 234566789999999988 8999999999999999999
Q ss_pred EEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcc
Q 004345 568 LIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
+||||+++|+|..+| +|||+++..... .
T Consensus 98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--~ 175 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--G 175 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--T
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC--C
Confidence 999999999998763 499999864222 1
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......+||+.|+|||++....++.++|||||||++|||++|+.||...... .+.. .... ... .+..
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~~~---~i~~-~~~------~~p~ 242 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELFQ---SIME-HNV------AYPK 242 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---HHHH-CCC------CCCT
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH---HHHH---HHHh-CCC------CCCC
Confidence 2234568999999999999999999999999999999999999998643221 1111 1111 110 0111
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCC-----HHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPN-----MPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 710 (760)
.....+.+++.+||+.||++||+ +.+|++
T Consensus 243 ----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 243 ----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp ----TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred ----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 11245778889999999999996 466654
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-26 Score=243.84 Aligned_cols=211 Identities=23% Similarity=0.336 Sum_probs=148.6
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC-----ccchHhHHHHHHHHhcCC---CCccceeeeEEEeC
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS-----GQGQEEFMNEVMVISNLQ---HRNLVRLLGCCVER 563 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l~---H~nIv~l~g~~~~~ 563 (760)
..++|++.++||+|+||.||+|+. .+++.||||++.... ......+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999995 578999999987432 122456788888877764 99999999999876
Q ss_pred C-----eeEEEEeccCCCChhhhh----------------------------------------------------cccc
Q 004345 564 E-----ENMLIYEYMPNKSLDSFL----------------------------------------------------FDFG 586 (760)
Q Consensus 564 ~-----~~~lV~Ey~~~gsL~~~L----------------------------------------------------~DFG 586 (760)
. ..++||||+. ++|.+++ +|||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 165 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG 165 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCS
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCc
Confidence 5 4799999997 5876652 4999
Q ss_pred ceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc---
Q 004345 587 LARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN--- 663 (760)
Q Consensus 587 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~--- 663 (760)
+++...... ......||+.|+|||.+....++.++|||||||++|||++|+.||........ .........
T Consensus 166 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~ 239 (308)
T 3g33_A 166 LARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ---LGKIFDLIGLPP 239 (308)
T ss_dssp CTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH---HHHHHHHHCCCC
T ss_pred cccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCC
Confidence 987653222 22346789999999999999999999999999999999999999864332221 111111111
Q ss_pred CCCcccc---ccccccC--CCC-----HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 664 DNNVIDL---VDPLISE--SGF-----KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 664 ~~~~~~~---~d~~l~~--~~~-----~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....... ....... ... ......+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000000 0000000 000 111256778999999999999999999976
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-26 Score=240.26 Aligned_cols=198 Identities=20% Similarity=0.260 Sum_probs=154.4
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|.+.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 367999999999999999999965 57889999986542 23456789999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||+++++|.+++ +|||+++....... .
T Consensus 94 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~ 171 (294)
T 2rku_A 94 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE--R 171 (294)
T ss_dssp EECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC--C
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc--c
Confidence 9999999997752 39999987643222 2
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....||+.|+|||.+....++.++||||||+++|||++|+.||....... ..... ..... .+....
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~-~~~~~------~~~~~~ 238 (294)
T 2rku_A 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRI-KKNEY------SIPKHI 238 (294)
T ss_dssp BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHH-HTTCC------CCCTTS
T ss_pred cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHH-hhccC------CCcccc
Confidence 234578999999999999899999999999999999999999986432211 11111 11110 011111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.+++.+||+.||++|||+.|+++
T Consensus 239 ----~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 239 ----NPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp ----CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ----CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 235678889999999999999999987
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-26 Score=241.68 Aligned_cols=198 Identities=24% Similarity=0.400 Sum_probs=147.4
Q ss_pred cccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 497 FQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
|.....||+|+||.||+|.. .+++.||||.+........+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 103 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence 44456899999999999995 56889999999876666678899999999999999999999999999999999999999
Q ss_pred CChhhhh------------------------------------------------------ccccceeEecCCCcccccc
Q 004345 576 KSLDSFL------------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 576 gsL~~~L------------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++|.+++ +|||+++...... ....
T Consensus 104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 181 (295)
T 2clq_A 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--PCTE 181 (295)
T ss_dssp EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------C
T ss_pred CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC--Cccc
Confidence 9987653 3899888654321 1123
Q ss_pred eeeeeccccCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 602 RLVGTYGYMSPEYAMEGR--FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~--~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
...|++.|+|||.+.... ++.++||||||+++|||++|+.||........ ........ ...+.+..
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~-------~~~~~~~~-- 249 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA---AMFKVGMF-------KVHPEIPE-- 249 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH---HHHHHHHH-------CCCCCCCT--
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH---HHHhhccc-------cccccccc--
Confidence 457899999999997654 88999999999999999999999853221110 00000000 00111111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.....+.+++.+||+.||++|||+.++++
T Consensus 250 --~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 250 --SMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp --TSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred --cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 12245778889999999999999999976
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-26 Score=245.35 Aligned_cols=198 Identities=20% Similarity=0.260 Sum_probs=154.7
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|.+.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467999999999999999999965 57899999986542 23456799999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||+++++|.+++ +|||+++....... .
T Consensus 120 ~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~ 197 (335)
T 2owb_A 120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE--R 197 (335)
T ss_dssp ECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC--C
T ss_pred EecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc--c
Confidence 9999999997752 49999987643222 2
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....||+.|+|||++....++.++||||||+++|||++|+.||....... ..... ..... .+....
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~-~~~~~------~~~~~~ 264 (335)
T 2owb_A 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRI-KKNEY------SIPKHI 264 (335)
T ss_dssp BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHH-HHTCC------CCCTTS
T ss_pred ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHH-hcCCC------CCCccC
Confidence 234578999999999999999999999999999999999999986432211 11111 00100 011111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.+++.+||+.||++|||+.|+++
T Consensus 265 ----~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 265 ----NPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ----CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 235677889999999999999999987
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-26 Score=244.87 Aligned_cols=219 Identities=25% Similarity=0.320 Sum_probs=150.6
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHH--HhcCCCCccceeeeEEEe-----CCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMV--ISNLQHRNLVRLLGCCVE-----REEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~--l~~l~H~nIv~l~g~~~~-----~~~~ 566 (760)
.++|++.+.||+|+||.||+|+. +++.||||++... ....+..|.++ +..++||||+++++.+.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46899999999999999999987 5899999998643 34455555555 445899999999986543 2356
Q ss_pred EEEEeccCCCChhhhh----------------------------------------------------------ccccce
Q 004345 567 MLIYEYMPNKSLDSFL----------------------------------------------------------FDFGLA 588 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L----------------------------------------------------------~DFGla 588 (760)
++||||+++|+|.++| +|||++
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a 167 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccce
Confidence 8999999999997753 399999
Q ss_pred eEecCCCc------ccccceeeeeccccCcccccc-------CCCCccchhHHHHHHHHHHHhCCCCCCCCccccccc--
Q 004345 589 RIFGGNQD------QAATKRLVGTYGYMSPEYAME-------GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELT-- 653 (760)
Q Consensus 589 ~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~-- 653 (760)
+.+..... ........||+.|+|||++.. ..++.++|||||||++|||++|+.|+..........
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~ 247 (336)
T 3g2f_A 168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA 247 (336)
T ss_dssp EECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCT
T ss_pred eecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHh
Confidence 87643221 112223469999999999976 456789999999999999999988764332211110
Q ss_pred HH---------HHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 654 LL---------GYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 654 ~~---------~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
.. ...............+.... .........+.+++.+||+.||++|||+.||+++|++++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 248 FQTEVGNHPTFEDMQVLVSREKQRPKFPEAW--KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp THHHHCSSCCHHHHHHHHTTSCCCCCCCTTC--CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hhcccCCCchHHHHHhhhcccccCCCCCccc--ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 00 00000011111101111100 11223556788999999999999999999999999987643
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9e-26 Score=256.08 Aligned_cols=201 Identities=24% Similarity=0.302 Sum_probs=153.0
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
.++|++.++||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 367999999999999999999965 7899999999643 2345678999999999999999999999999999999999
Q ss_pred eccCCCChhhhh-----------------------------------------------------ccccceeEecCCCcc
Q 004345 571 EYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 571 Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||+++|+|.+++ +|||+++.+....
T Consensus 101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-- 178 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-- 178 (486)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---
T ss_pred EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC--
Confidence 999999997652 3899987653322
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......||+.|+|||++.+ .++.++||||+||++|||++|+.||...... ....... .+...... +..
T Consensus 179 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~----~~~~~~~~-~~~-- 246 (486)
T 3mwu_A 179 -KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DILKRVE----TGKYAFDL-PQW-- 246 (486)
T ss_dssp ----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH----HTCCCSCS-GGG--
T ss_pred -ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHH----hCCCCCCC-ccc--
Confidence 2234579999999999875 5999999999999999999999998643221 1111111 11110000 000
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
......+.+++.+||+.||.+|||+.|+++.
T Consensus 247 ---~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 247 ---RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ---GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ---CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1112457788999999999999999999983
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-26 Score=251.42 Aligned_cols=198 Identities=20% Similarity=0.276 Sum_probs=142.8
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHH-HhcCCCCccceeeeEEEeCCeeEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMV-ISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~-l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
.++|++.+.||+|+||.||+++.. +++.||||++++.. ....+.+.+|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467999999999999999999965 57899999997543 2334567778877 577899999999999999999999
Q ss_pred EEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCccc
Q 004345 569 IYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 569 V~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||||+++|+|..+| +|||+++...... .
T Consensus 117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~--~ 194 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--S 194 (373)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC--C
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC--C
Confidence 99999999997653 4999998532221 2
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
.....+||+.|+|||++....++.++|||||||++|||++|+.||...... .... .... ... .+...
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~~~---~i~~-~~~------~~~~~ 261 (373)
T 2r5t_A 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA---EMYD---NILN-KPL------QLKPN 261 (373)
T ss_dssp CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH---HHHH---HHHH-SCC------CCCSS
T ss_pred ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH---HHHH---HHHh-ccc------CCCCC
Confidence 234568999999999999999999999999999999999999998643221 1111 1111 100 01111
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+.+++.+||+.||.+||++.+.++
T Consensus 262 ----~~~~~~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 262 ----ITNSARHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSTTTTTTHH
T ss_pred ----CCHHHHHHHHHHcccCHHhCCCCCCCHH
Confidence 1245678889999999999999864443
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-26 Score=249.55 Aligned_cols=218 Identities=17% Similarity=0.223 Sum_probs=149.2
Q ss_pred CHHHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCcc-----------chHhHHHHHHHHhcCCCCccc
Q 004345 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQ-----------GQEEFMNEVMVISNLQHRNLV 554 (760)
Q Consensus 486 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~nIv 554 (760)
...++....++|++.+.||+|+||.||+|...+++.||||++...... ..+.+.+|+.++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 356788889999999999999999999999888999999999643221 126799999999999999999
Q ss_pred eeeeEEEeC-----CeeEEEEeccCCCChhhh------------------------------------------------
Q 004345 555 RLLGCCVER-----EENMLIYEYMPNKSLDSF------------------------------------------------ 581 (760)
Q Consensus 555 ~l~g~~~~~-----~~~~lV~Ey~~~gsL~~~------------------------------------------------ 581 (760)
++++++... ...++||||++ |+|.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~ 171 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN 171 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCC
Confidence 999998653 35799999998 465543
Q ss_pred ---hccccceeEecCCCcccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHH
Q 004345 582 ---LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGY 657 (760)
Q Consensus 582 ---L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~ 657 (760)
|+|||+++...... ......||+.|+|||.+.. ..++.++|||||||++|||++|+.||........ ...
T Consensus 172 ~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~ 245 (362)
T 3pg1_A 172 DITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ---LNK 245 (362)
T ss_dssp CEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHH
T ss_pred CEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH---HHH
Confidence 24999997543222 2234578999999999876 6799999999999999999999999864332211 111
Q ss_pred HHHhccCCCc-----------cccccccccC---C----CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 658 AWKLWNDNNV-----------IDLVDPLISE---S----GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 658 ~~~~~~~~~~-----------~~~~d~~l~~---~----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.......... .+.+...+.. . ........+.+++.+||+.||++|||+.|+++
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 1111110000 0000000000 0 00111245788999999999999999999987
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=244.17 Aligned_cols=205 Identities=23% Similarity=0.323 Sum_probs=153.9
Q ss_pred ccccccccccccCCceeEEEEEe----cCCcEEEEEEecccC----ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCC
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL----QDGQEIAVKRLSKAS----GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVERE 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~ 564 (760)
.++|++.+.||+|+||.||+++. .+++.||||+++... ....+.+.+|+.++.++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36899999999999999999996 478999999997532 23456788999999999 6999999999999999
Q ss_pred eeEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCC
Q 004345 565 ENMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGN 594 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~ 594 (760)
..+|||||+++|+|.++| +|||+++.+...
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 212 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD 212 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGG
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccC
Confidence 999999999999998763 499999876432
Q ss_pred CcccccceeeeeccccCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 595 QDQAATKRLVGTYGYMSPEYAME--GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
.. .......||+.|+|||++.. ..++.++|||||||++|||++|+.||......... .......... .
T Consensus 213 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~-------~ 282 (355)
T 1vzo_A 213 ET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ--AEISRRILKS-------E 282 (355)
T ss_dssp GG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH--HHHHHHHHHC-------C
T ss_pred CC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH--HHHHHHHhcc-------C
Confidence 22 22234579999999999985 34789999999999999999999998643322111 1111111100 0
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCC-----CHHHHHHHH
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRP-----NMPTVVSML 712 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~~L 712 (760)
+.. +......+.+++.+||+.||++|| ++.|+++..
T Consensus 283 ~~~----~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 PPY----PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp CCC----CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred CCC----CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 011 111224567889999999999999 999998743
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=234.63 Aligned_cols=197 Identities=22% Similarity=0.371 Sum_probs=146.9
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEe----CCeeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE----REENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~----~~~~~ 567 (760)
..|++.+.||+|+||.||+|.. .++..||+|++... .....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 3478889999999999999986 46788999998753 23445679999999999999999999999875 35689
Q ss_pred EEEeccCCCChhhhh-----------------------------------------------------ccccceeEecCC
Q 004345 568 LIYEYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGN 594 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~ 594 (760)
+||||+++++|.+++ +|||+++.....
T Consensus 106 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~ 185 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc
Confidence 999999999998763 377777543221
Q ss_pred CcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 595 QDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
......||+.|+|||.+. +.++.++||||||+++|||++|+.||....... . .......+......
T Consensus 186 ----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-----~-~~~~~~~~~~~~~~--- 251 (290)
T 1t4h_A 186 ----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAA-----Q-IYRRVTSGVKPASF--- 251 (290)
T ss_dssp ----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-----H-HHHHHTTTCCCGGG---
T ss_pred ----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH-----H-HHHHHhccCCcccc---
Confidence 223456899999999876 569999999999999999999999986432211 1 11111111111111
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
... ....+.+++.+||+.||.+|||+.|+++
T Consensus 252 -~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 252 -DKV----AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -GGC----CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CCC----CCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111 1245778899999999999999999986
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=237.05 Aligned_cols=200 Identities=20% Similarity=0.351 Sum_probs=149.7
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
..++|++.+.||+|+||.||+|... +++.||||.+... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4567999999999999999999965 5899999998753 345789999999999999999999999999999999999
Q ss_pred ccCCCChhhhh---------------------------------------------------ccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|+++++|.+++ +|||+++...... ...
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~ 182 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM--AKR 182 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--SCB
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--ccc
Confidence 99999998763 3999998764322 122
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....|++.|+|||.+....++.++||||||+++|||++|+.||....... . ..... ........ ..
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~---~~~~~-~~~~~~~~-------~~ 248 (314)
T 3com_A 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR---A---IFMIP-TNPPPTFR-------KP 248 (314)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH---H---HHHHH-HSCCCCCS-------SG
T ss_pred CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH---H---HHHHh-cCCCcccC-------Cc
Confidence 34578999999999999999999999999999999999999986432211 0 11000 00000000 01
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......+.+++.+||+.||++|||+.++++
T Consensus 249 ~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 249 ELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 111245778899999999999999999986
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=243.94 Aligned_cols=205 Identities=17% Similarity=0.279 Sum_probs=154.5
Q ss_pred HHHhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCc--------cchHhHHHHHHHHhcC-CCCccceeeeE
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG--------QGQEEFMNEVMVISNL-QHRNLVRLLGC 559 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l-~H~nIv~l~g~ 559 (760)
.....++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++.++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445578999999999999999999975 789999999865431 1145688999999999 79999999999
Q ss_pred EEeCCeeEEEEeccCCCChhhhh--------------------------------------------------cccccee
Q 004345 560 CVEREENMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLAR 589 (760)
Q Consensus 560 ~~~~~~~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~ 589 (760)
+......++||||+++++|.+++ +|||+++
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~ 248 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSC 248 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCccc
Confidence 99999999999999999998763 3999998
Q ss_pred EecCCCcccccceeeeeccccCcccccc------CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc
Q 004345 590 IFGGNQDQAATKRLVGTYGYMSPEYAME------GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN 663 (760)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 663 (760)
.+.... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||...... .......
T Consensus 249 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---~~~~~i~---- 318 (365)
T 2y7j_A 249 HLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI---LMLRMIM---- 318 (365)
T ss_dssp ECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH----
T ss_pred ccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH---HHHHHHH----
Confidence 765332 2234679999999999863 35889999999999999999999998632211 1111111
Q ss_pred CCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 664 DNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 664 ~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+.. ....+.. .. ....+.+++.+||+.||++|||+.|+++
T Consensus 319 ~~~~-~~~~~~~-~~----~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 319 EGQY-QFSSPEW-DD----RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HTCC-CCCHHHH-SS----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hCCC-CCCCccc-cc----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1100 0000000 00 1245778899999999999999999987
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.7e-26 Score=237.46 Aligned_cols=192 Identities=20% Similarity=0.267 Sum_probs=147.6
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++... ......++.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467999999999999999999965 7899999999754 233456789999999999 999999999999999999999
Q ss_pred EeccCCCChhhhh-------------------------------------------------------------------
Q 004345 570 YEYMPNKSLDSFL------------------------------------------------------------------- 582 (760)
Q Consensus 570 ~Ey~~~gsL~~~L------------------------------------------------------------------- 582 (760)
|||+++++|.++|
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence 9999999998763
Q ss_pred ------ccccceeEecCCCcccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHH
Q 004345 583 ------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL 655 (760)
Q Consensus 583 ------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~ 655 (760)
+|||+++..... ....||+.|+|||.+... .++.++|||||||++|||++|..++.... ..
T Consensus 170 ~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------~~ 237 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------QW 237 (289)
T ss_dssp CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------HH
T ss_pred ceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------HH
Confidence 156666554321 124589999999999866 56789999999999999999987753211 00
Q ss_pred HHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 656 GYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 656 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.....+... .+.... ...+.+++.+||+.||++|||+.|+++
T Consensus 238 ----~~~~~~~~~-----~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 238 ----HEIRQGRLP-----RIPQVL----SQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ----HHHHTTCCC-----CCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----HHHHcCCCC-----CCCccc----CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 111111111 111111 245778889999999999999999976
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-26 Score=241.66 Aligned_cols=202 Identities=25% Similarity=0.363 Sum_probs=151.0
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEe--CCeeEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVE--REENML 568 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~--~~~~~l 568 (760)
.++|++.+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999965 68999999997542 3345679999999999999999999998864 567899
Q ss_pred EEeccCCCChhhhh-----------------------------------------------------------cccccee
Q 004345 569 IYEYMPNKSLDSFL-----------------------------------------------------------FDFGLAR 589 (760)
Q Consensus 569 V~Ey~~~gsL~~~L-----------------------------------------------------------~DFGla~ 589 (760)
||||+++++|.+++ +|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999987653 2666665
Q ss_pred EecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccc
Q 004345 590 IFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVID 669 (760)
Q Consensus 590 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (760)
....... ......|++.|+|||.+....++.++||||||+++|||++|+.||...... .+.... ..+...
T Consensus 165 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~i----~~~~~~- 234 (279)
T 2w5a_A 165 ILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK---ELAGKI----REGKFR- 234 (279)
T ss_dssp HC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH----HHTCCC-
T ss_pred eeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH---HHHHHH----hhcccc-
Confidence 4422111 112346889999999999999999999999999999999999998643221 111111 111111
Q ss_pred cccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 670 LVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 670 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
.+.. .....+.+++.+||+.||++|||+.||++.+.
T Consensus 235 ----~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 235 ----RIPY----RYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp ----CCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ----cCCc----ccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 1111 11245778889999999999999999998663
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=241.62 Aligned_cols=208 Identities=21% Similarity=0.285 Sum_probs=154.1
Q ss_pred HHHHHhccccccc-cccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcC-CCCccceeeeEEEe
Q 004345 488 EELANATNNFQLA-NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562 (760)
Q Consensus 488 ~~l~~~~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~ 562 (760)
.....-.++|.+. +.||+|+||.||+|... +++.||||++.... ......+.+|+.++.++ +||||+++++++..
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~ 100 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN 100 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence 3444455678877 88999999999999965 68999999997542 33467899999999999 56999999999999
Q ss_pred CCeeEEEEeccCCCChhhhh-------------------------------------------------------ccccc
Q 004345 563 REENMLIYEYMPNKSLDSFL-------------------------------------------------------FDFGL 587 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~L-------------------------------------------------------~DFGl 587 (760)
.+..++||||+++|+|.+++ +|||+
T Consensus 101 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 101 TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 99999999999999987763 38999
Q ss_pred eeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCc
Q 004345 588 ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 588 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (760)
++...... ......||+.|+|||.+....++.++||||||+++|||++|+.||....... ........ ...
T Consensus 181 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i~~~-~~~-- 251 (327)
T 3lm5_A 181 SRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE---TYLNISQV-NVD-- 251 (327)
T ss_dssp CEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHT-CCC--
T ss_pred ccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH---HHHHHHhc-ccc--
Confidence 88764322 1234579999999999999999999999999999999999999986432211 11111110 000
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
. ...........+.+++.+||+.||++|||+.|+++.
T Consensus 252 --~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 252 --Y-----SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp --C-----CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --c-----CchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0 000111122457788999999999999999999873
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=255.72 Aligned_cols=201 Identities=21% Similarity=0.294 Sum_probs=151.3
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEecccCc-------------cchHhHHHHHHHHhcCCCCccceeee
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG-------------QGQEEFMNEVMVISNLQHRNLVRLLG 558 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------------~~~~~f~~E~~~l~~l~H~nIv~l~g 558 (760)
..++|++.++||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578999999999999999999965 578999999875321 33567999999999999999999999
Q ss_pred EEEeCCeeEEEEeccCCCChhhhh-----------------------------------------------------ccc
Q 004345 559 CCVEREENMLIYEYMPNKSLDSFL-----------------------------------------------------FDF 585 (760)
Q Consensus 559 ~~~~~~~~~lV~Ey~~~gsL~~~L-----------------------------------------------------~DF 585 (760)
++.+....++||||+++|+|.++| +||
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 193 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDF 193 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEEC
Confidence 999999999999999999997652 399
Q ss_pred cceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC
Q 004345 586 GLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN 665 (760)
Q Consensus 586 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 665 (760)
|+++.+.... ......||+.|+|||++. ..++.++||||+||++|||++|+.||...... .+...+. .+
T Consensus 194 g~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~----~~ 262 (504)
T 3q5i_A 194 GLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ---DIIKKVE----KG 262 (504)
T ss_dssp TTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH----HC
T ss_pred CCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHH----cC
Confidence 9998764332 223457999999999986 56999999999999999999999998643221 1111111 11
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 666 NVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 666 ~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.... +...... ....+.+++.+||+.||.+|||+.|+++
T Consensus 263 ~~~~--~~~~~~~----~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 263 KYYF--DFNDWKN----ISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CCCC--CHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCC--CccccCC----CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1000 0000000 1245778899999999999999999986
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-26 Score=245.14 Aligned_cols=214 Identities=20% Similarity=0.237 Sum_probs=146.9
Q ss_pred HhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCc-----cchHhHHHHHHHHhcCCCCccceeeeEEEeCCe
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG-----QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE 565 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-----~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~ 565 (760)
...++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999964 689999999974321 123578899999999999999999999999999
Q ss_pred eEEEEeccCCCChhhh---------------------------------------------------hccccceeEecCC
Q 004345 566 NMLIYEYMPNKSLDSF---------------------------------------------------LFDFGLARIFGGN 594 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~ 594 (760)
.++||||+++ +|..+ |+|||+++.+...
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 9999999986 66543 2499999865322
Q ss_pred CcccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC---CCcc--
Q 004345 595 QDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND---NNVI-- 668 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~-- 668 (760)
. .......||+.|+|||.+.+. .++.++|||||||++|||++|..|+....... ........... ....
T Consensus 166 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 166 N--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD---QLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp C--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCTTTSSST
T ss_pred c--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH---HHHHHHHHcCCCChhhhhhh
Confidence 2 222345789999999999754 58999999999999999999999886433221 11111111110 0000
Q ss_pred ----ccccccccCCCC-----HHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 669 ----DLVDPLISESGF-----KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 669 ----~~~d~~l~~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
+.+........+ ......+.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000000001 1112567889999999999999999999884
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.9e-25 Score=250.45 Aligned_cols=211 Identities=21% Similarity=0.292 Sum_probs=157.9
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCC-CccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH-RNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H-~nIv~l~g~~~~~~~~~lV~E 571 (760)
.++|++.++||+|+||.||+|+. .+++.||||++.... ..+++.+|++++..++| ++|..+..++.+.+..+||||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999995 578999999876432 33568999999999986 566667777788889999999
Q ss_pred ccCCCChhhhh------------------------------------------------------ccccceeEecCCCcc
Q 004345 572 YMPNKSLDSFL------------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 572 y~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
|+ +++|.+++ +|||+++.+......
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 99 89987763 399999987543321
Q ss_pred -----cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 598 -----AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 598 -----~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
.......||+.|+|||.+....++.++|||||||+||||++|+.||..........................+
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l-- 240 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEAL-- 240 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHH--
T ss_pred cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHH--
Confidence 1223567999999999999999999999999999999999999999754332222211111111000111000
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.... ...+.+++..||+.+|++||++.+|+++|++++
T Consensus 241 ---~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 241 ---CRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp ---HTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred ---hcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 0111 246788999999999999999999999998763
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.1e-26 Score=256.37 Aligned_cols=200 Identities=26% Similarity=0.304 Sum_probs=154.0
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.++||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467999999999999999999965 78999999996532 34567899999999999999999999999999999999
Q ss_pred EeccCCCChhhhh-----------------------------------------------------ccccceeEecCCCc
Q 004345 570 YEYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 570 ~Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~ 596 (760)
|||+.+|+|.+++ +|||+++.+....
T Consensus 105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 183 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK- 183 (484)
T ss_dssp ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC-
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc-
Confidence 9999999997652 3899887654322
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
......||+.|+|||++.+ .++.++||||+||++|||++|+.||...... .....+. .+...-. .+..
T Consensus 184 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~----~~~~~~~-~~~~- 251 (484)
T 3nyv_A 184 --KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY---DILKKVE----KGKYTFE-LPQW- 251 (484)
T ss_dssp --SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH----HCCCCCC-SGGG-
T ss_pred --ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHH----cCCCCCC-Cccc-
Confidence 2233579999999999865 6999999999999999999999998643221 1111111 1111000 0000
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......+.+++.+||+.||++|||+.|+++
T Consensus 252 ----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 252 ----KKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp ----GGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----ccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 111245778899999999999999999987
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-26 Score=242.81 Aligned_cols=212 Identities=20% Similarity=0.323 Sum_probs=135.2
Q ss_pred HhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
...++|++.+.||+|+||.||+|.. .+++.||||++.... ....+++.+|+.++++++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3457899999999999999999985 468899999986542 34456789999999999999999999999999999999
Q ss_pred EeccCCCChhhhh----------------------------------------------------------ccccceeEe
Q 004345 570 YEYMPNKSLDSFL----------------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 570 ~Ey~~~gsL~~~L----------------------------------------------------------~DFGla~~~ 591 (760)
|||+++++|.+++ +|||+++.+
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 171 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence 9999999987642 388887655
Q ss_pred cCCCc---ccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCc
Q 004345 592 GGNQD---QAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 592 ~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (760)
..... ........||+.|+|||.+.. ..++.++||||||+++|||++|+.||....... ..............
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~ 248 (303)
T 2vwi_A 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK---VLMLTLQNDPPSLE 248 (303)
T ss_dssp C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG---HHHHHHTSSCCCTT
T ss_pred ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh---HHHHHhccCCCccc
Confidence 32211 112234578999999999875 568999999999999999999999986543221 11111110000000
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....++.+.... ...+.+++.+||+.||.+|||+.++++
T Consensus 249 ~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 249 TGVQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp C-----CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccchhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 001111111111 245778889999999999999999986
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-25 Score=233.69 Aligned_cols=198 Identities=21% Similarity=0.334 Sum_probs=145.6
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 367999999999999999999975 7899999998643 234456899999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||+++++|.+++ +|||+++...... .
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~ 166 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---F 166 (276)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------
T ss_pred EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCc---c
Confidence 9999999998763 3899887654322 1
Q ss_pred cceeeeeccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRF-SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
.....|++.|+|||.+....+ +.++||||||+++|||++|+.||...... ...... ..+.. .+...
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~----~~~~~------~~~~~ 233 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP---TLFKKI----RGGVF------YIPEY 233 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH----HHCCC------CCCTT
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH---HHHHHh----hcCcc------cCchh
Confidence 223568999999999987765 68999999999999999999998643211 111111 11100 01111
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
....+.+++.+||+.||++|||+.|+++.
T Consensus 234 ----~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 234 ----LNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----cCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 12456788899999999999999999883
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-26 Score=266.97 Aligned_cols=210 Identities=22% Similarity=0.336 Sum_probs=155.8
Q ss_pred HHHHhccccccccccccCCceeEEEEEec----CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeC
Q 004345 489 ELANATNNFQLANKLGQGGFGPVYKGKLQ----DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER 563 (760)
Q Consensus 489 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~ 563 (760)
+.....++|++.+.||+|+||.||+|... .+..||||++.... ....+.|.+|+.++++++||||+++++++. +
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 34445678999999999999999999864 24679999987543 334568999999999999999999999985 4
Q ss_pred CeeEEEEeccCCCChhhhh---------------------------------------------------ccccceeEec
Q 004345 564 EENMLIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFG 592 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~ 592 (760)
+..++||||+++|+|.++| +|||+++...
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 6689999999999998763 4999998764
Q ss_pred CCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccc
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (760)
.... .......+|+.|||||.+....++.++|||||||++|||++ |..||...... ....... .+...
T Consensus 543 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---~~~~~i~----~~~~~--- 611 (656)
T 2j0j_A 543 DSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGRIE----NGERL--- 611 (656)
T ss_dssp C-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHHHH----HTCCC---
T ss_pred CCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHH----cCCCC---
Confidence 3322 12223456789999999999999999999999999999997 88898643221 1111111 11100
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.+. ......+.+++.+||+.||++|||+.+|+++|++++
T Consensus 612 --~~~----~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 612 --PMP----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp --CCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCC----ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 011 112246778999999999999999999999998764
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-26 Score=245.56 Aligned_cols=209 Identities=22% Similarity=0.412 Sum_probs=149.7
Q ss_pred ccCHHHHHHhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEE
Q 004345 484 VFNFEELANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCV 561 (760)
Q Consensus 484 ~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~ 561 (760)
.+++.++....++|++.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.++.++ +||||+++++++.
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 345556666788999999999999999999996 47899999998654 34567899999999998 7999999999998
Q ss_pred e------CCeeEEEEeccCCCChhhhh----------------------------------------------------c
Q 004345 562 E------REENMLIYEYMPNKSLDSFL----------------------------------------------------F 583 (760)
Q Consensus 562 ~------~~~~~lV~Ey~~~gsL~~~L----------------------------------------------------~ 583 (760)
. ....++||||+++++|.++| +
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEEC
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEe
Confidence 7 46789999999999987763 3
Q ss_pred cccceeEecCCCcccccceeeeeccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM-----EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA 658 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~ 658 (760)
|||+++...... .......||+.|+|||.+. ...++.++|||||||++|||++|+.||....... . .
T Consensus 172 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~---~ 243 (326)
T 2x7f_A 172 DFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR---A---L 243 (326)
T ss_dssp CCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH---H---H
T ss_pred eCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH---H---H
Confidence 899887653221 1223457899999999987 5678999999999999999999999986432211 1 1
Q ss_pred HHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 659 WKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 659 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..... ... +.+.... ....+.+++.+||+.||++|||+.++++
T Consensus 244 ~~~~~-~~~-----~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 244 FLIPR-NPA-----PRLKSKK---WSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHH-SCC-----CCCSCSC---SCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHhhc-Ccc-----ccCCccc---cCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11100 111 1111111 1245778888999999999999999987
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-25 Score=251.70 Aligned_cols=202 Identities=23% Similarity=0.295 Sum_probs=154.5
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++.+.. ....+.+.+|+.++++++||||+++++++......++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367999999999999999999974 68999999997532 24456799999999999999999999999999999999
Q ss_pred EeccCCCChhhhh------------------------------------------------------ccccceeEecCCC
Q 004345 570 YEYMPNKSLDSFL------------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 570 ~Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~~~ 595 (760)
|||+++|+|..+| +|||+++.+....
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~ 343 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC
Confidence 9999999997542 3999998764332
Q ss_pred cccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 596 DQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
. .....+||+.|||||++.+..++.++|||||||++|||++|+.||........ .......... ... .
T Consensus 344 ~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~--~~~~~~~i~~-~~~------~- 411 (543)
T 3c4z_A 344 T--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRVLE-QAV------T- 411 (543)
T ss_dssp C--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC--HHHHHHHHHH-CCC------C-
T ss_pred c--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh--HHHHHHHHhh-ccc------C-
Confidence 2 23345899999999999999999999999999999999999999964322111 1111111110 000 0
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCH-----HHHHH
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNM-----PTVVS 710 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~-----~ev~~ 710 (760)
.+......+.+++.+||+.||++||++ .+|++
T Consensus 412 ---~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 412 ---YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ---CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ---CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 111112456778889999999999975 55654
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.7e-26 Score=240.64 Aligned_cols=213 Identities=20% Similarity=0.256 Sum_probs=145.1
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEE-----------
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCV----------- 561 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~----------- 561 (760)
.++|++.+.||+|+||.||+|... +++.||||++........+++.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 367999999999999999999975 58999999997665566778999999999999999999999873
Q ss_pred ---eCCeeEEEEeccCCCChhhhh--------------------------------------------------ccccce
Q 004345 562 ---EREENMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLA 588 (760)
Q Consensus 562 ---~~~~~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla 588 (760)
+....++||||++ |+|.+++ +|||++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~ 168 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccc
Confidence 3467899999998 5777652 489998
Q ss_pred eEecCCCcc-cccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC--
Q 004345 589 RIFGGNQDQ-AATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND-- 664 (760)
Q Consensus 589 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~-- 664 (760)
+........ .......+|..|+|||.+.. ..++.++||||||+++|||++|+.||........ ..........
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~ 245 (320)
T 2i6l_A 169 RIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ---MQLILESIPVVH 245 (320)
T ss_dssp BCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHSCCCC
T ss_pred cccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCCCc
Confidence 865422111 12223467899999998875 6799999999999999999999999864432211 1111110000
Q ss_pred -CCccc-------cccccccC-CCC-----HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 665 -NNVID-------LVDPLISE-SGF-----KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 665 -~~~~~-------~~d~~l~~-~~~-----~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+ .+...... ... ......+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00000 00000000 000 011256788999999999999999999987
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=245.93 Aligned_cols=210 Identities=19% Similarity=0.277 Sum_probs=145.3
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC------
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE------ 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~------ 564 (760)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+++.+|++++++++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46899999999999999999996 478999999996532 233567899999999999999999999998763
Q ss_pred eeEEEEeccCCCChhhhh-------------------------------------------------ccccceeEecCCC
Q 004345 565 ENMLIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~ 595 (760)
..++||||+ +++|.+++ +|||+++.....
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 181 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE- 181 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS-
T ss_pred eEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccc-
Confidence 459999999 77887652 499999875422
Q ss_pred cccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH--------HHhccCCC
Q 004345 596 DQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA--------WKLWNDNN 666 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~--------~~~~~~~~ 666 (760)
.....+|+.|+|||++.+ ..++.++||||+||+++||++|+.||......+....+... ...+....
T Consensus 182 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~ 257 (367)
T 1cm8_A 182 ----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 257 (367)
T ss_dssp ----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred ----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHH
Confidence 224578999999999887 67999999999999999999999998643322111110000 00000000
Q ss_pred ccccc-------cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 667 VIDLV-------DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 667 ~~~~~-------d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+ ...+. .........+.+++.+||+.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 258 AKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 00000 00000 001112346778899999999999999999988
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-25 Score=235.95 Aligned_cols=200 Identities=18% Similarity=0.213 Sum_probs=147.3
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC----ccchHhHHHHHHHHhcCCCCccceeeeEEE--eCCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS----GQGQEEFMNEVMVISNLQHRNLVRLLGCCV--EREEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~----~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~--~~~~~ 566 (760)
.++|++.+.||+|+||.||++.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46899999999999999999996 468899999997532 344678999999999999999999999984 44578
Q ss_pred EEEEeccCCCChhhh----------------------------------------------------hccccceeEecCC
Q 004345 567 MLIYEYMPNKSLDSF----------------------------------------------------LFDFGLARIFGGN 594 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~----------------------------------------------------L~DFGla~~~~~~ 594 (760)
++||||++++ |.++ |+|||+++.....
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 9999999876 3322 2499999876533
Q ss_pred CcccccceeeeeccccCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 595 QDQAATKRLVGTYGYMSPEYAMEGR--FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
..........||+.|+|||.+.... ++.++||||||+++|||++|+.||...... ... .....+..
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~----~~i~~~~~----- 230 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY---KLF----ENIGKGSY----- 230 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHH----HHHHHCCC-----
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH---HHH----HHHhcCCC-----
Confidence 3223333456899999999987644 478999999999999999999998643211 111 11111110
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.+... ....+.+++.+||+.||++|||+.|+++.
T Consensus 231 -~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 -AIPGD----CGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -CCCSS----SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -CCCCc----cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11111 12456788899999999999999999973
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.92 E-value=9.7e-26 Score=237.37 Aligned_cols=200 Identities=24% Similarity=0.384 Sum_probs=135.5
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc-cch-HhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG-QGQ-EEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~-~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
..++|++.+.||+|+||.||+|+. .+++.||||++..... ... +.+.++...++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 347899999999999999999996 5789999999975422 222 3344555568889999999999999999999999
Q ss_pred EeccCCCChhhh-------------------------------------------------------hccccceeEecCC
Q 004345 570 YEYMPNKSLDSF-------------------------------------------------------LFDFGLARIFGGN 594 (760)
Q Consensus 570 ~Ey~~~gsL~~~-------------------------------------------------------L~DFGla~~~~~~ 594 (760)
|||+++ +|.++ |+|||+++.....
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence 999974 65443 2399998865432
Q ss_pred CcccccceeeeeccccCcccc----ccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccc
Q 004345 595 QDQAATKRLVGTYGYMSPEYA----MEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDL 670 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~----~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (760)
. ......||+.|+|||.+ ....++.++||||||+++|||++|+.||....... ...........
T Consensus 164 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~---- 231 (290)
T 3fme_A 164 V---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-----QQLKQVVEEPS---- 231 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-----HHHHHHHHSCC----
T ss_pred c---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH-----HHHHHHhccCC----
Confidence 2 12234689999999996 45678999999999999999999999986422211 11111111110
Q ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 671 VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 671 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 232 --~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 --PQLPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp --CCCCT---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCccc---ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 00111 111245778889999999999999999987
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-25 Score=244.62 Aligned_cols=209 Identities=18% Similarity=0.239 Sum_probs=145.0
Q ss_pred HHhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeC------
Q 004345 491 ANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER------ 563 (760)
Q Consensus 491 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~------ 563 (760)
....++|++.+.||+|+||.||+|+. .+++.||||++.... ....+|++++++++|||||++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 44567899999999999999999985 578999999986432 2334799999999999999999998543
Q ss_pred --------------------------------CeeEEEEeccCCCChhhh------------------------------
Q 004345 564 --------------------------------EENMLIYEYMPNKSLDSF------------------------------ 581 (760)
Q Consensus 564 --------------------------------~~~~lV~Ey~~~gsL~~~------------------------------ 581 (760)
...++||||+++ +|.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 337899999984 54432
Q ss_pred -------------------------hccccceeEecCCCcccccceeeeeccccCccccccC-CCCccchhHHHHHHHHH
Q 004345 582 -------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLE 635 (760)
Q Consensus 582 -------------------------L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~E 635 (760)
|+|||+++.+..... .....+|+.|+|||.+.+. .++.++||||+||++||
T Consensus 158 H~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 158 HSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp HTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred HHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 249999987643322 2245789999999998765 49999999999999999
Q ss_pred HHhCCCCCCCCcccccccHHHHHHHhccCCC----------ccccccccccC-----CCCHHHHHHHHHHHHhcccCCcC
Q 004345 636 IVSGRKNTSFYHEEFELTLLGYAWKLWNDNN----------VIDLVDPLISE-----SGFKMEIIRCVNVGLLCVQEFVK 700 (760)
Q Consensus 636 lltG~~p~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~d~~l~~-----~~~~~~~~~~~~l~~~Cl~~~P~ 700 (760)
|++|+.||......+.. ........... ..+..-+.+.. ..+......+.+++.+||+.||+
T Consensus 235 ll~g~~pf~~~~~~~~~---~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 235 LILGKPLFSGETSIDQL---VRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHSSCSSCCSSHHHHH---HHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHhCCCCCCCCChHHHH---HHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 99999998743322211 11111111000 00000000000 01111234578899999999999
Q ss_pred CCCCHHHHHH
Q 004345 701 DRPNMPTVVS 710 (760)
Q Consensus 701 ~RPt~~ev~~ 710 (760)
+|||+.|+++
T Consensus 312 ~R~t~~e~l~ 321 (383)
T 3eb0_A 312 LRINPYEAMA 321 (383)
T ss_dssp GSCCHHHHHT
T ss_pred hCCCHHHHhc
Confidence 9999999985
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-25 Score=242.37 Aligned_cols=206 Identities=22% Similarity=0.354 Sum_probs=153.1
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccc-----------------hHhHHHHHHHHhcCCCCcccee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQG-----------------QEEFMNEVMVISNLQHRNLVRL 556 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~-----------------~~~f~~E~~~l~~l~H~nIv~l 556 (760)
.++|++.+.||+|+||.||+|+. +++.||||++....... .+.|.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999999 89999999997432111 1789999999999999999999
Q ss_pred eeEEEeCCeeEEEEeccCCCChhhh------h------------------------------------------------
Q 004345 557 LGCCVEREENMLIYEYMPNKSLDSF------L------------------------------------------------ 582 (760)
Q Consensus 557 ~g~~~~~~~~~lV~Ey~~~gsL~~~------L------------------------------------------------ 582 (760)
++++.+.+..++||||+++++|.++ +
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN 188 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTT
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCC
Confidence 9999999999999999999998765 2
Q ss_pred -----ccccceeEecCCCcccccceeeeeccccCccccccC-CCCc-cchhHHHHHHHHHHHhCCCCCCCCcccccccHH
Q 004345 583 -----FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG-RFSE-KSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL 655 (760)
Q Consensus 583 -----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~-ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~ 655 (760)
+|||+++..... ......|++.|+|||.+... .++. ++||||||+++|||++|+.||...... ....
T Consensus 189 ~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~ 262 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--VELF 262 (348)
T ss_dssp SCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--HHHH
T ss_pred CcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHH
Confidence 288888765332 22345789999999999877 6666 999999999999999999998643321 1111
Q ss_pred HHHHHhccCCCcc------cccccccc---CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 656 GYAWKLWNDNNVI------DLVDPLIS---ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 656 ~~~~~~~~~~~~~------~~~d~~l~---~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
... ..+... ....+... ..........+.+++.+||+.||.+|||+.|+++
T Consensus 263 ~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 263 NNI----RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHH----TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHH----hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111 111110 00000000 0000112356778999999999999999999987
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-25 Score=242.71 Aligned_cols=210 Identities=18% Similarity=0.246 Sum_probs=143.5
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC------
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE------ 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~------ 564 (760)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999854 68899999997532 234567899999999999999999999997665
Q ss_pred eeEEEEeccCCCChhhh------------------------------------------------hccccceeEecCCCc
Q 004345 565 ENMLIYEYMPNKSLDSF------------------------------------------------LFDFGLARIFGGNQD 596 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~------------------------------------------------L~DFGla~~~~~~~~ 596 (760)
..++||||+++ +|.++ |+|||+++......
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 181 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF- 181 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC---------
T ss_pred ceEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccc-
Confidence 68999999975 55443 24999998654221
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc-------------
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN------------- 663 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~------------- 663 (760)
......||+.|+|||++....++.++|||||||++|||++|+.||........ .........
T Consensus 182 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~ 256 (371)
T 2xrw_A 182 --MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ---WNKVIEQLGTPCPEFMKKLQPT 256 (371)
T ss_dssp ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHC-CCCCCHHHHTTSCHH
T ss_pred --ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHHhhhH
Confidence 22345789999999999999999999999999999999999999864332111 000000000
Q ss_pred ------C------CCccccccccccCCC---CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 664 ------D------NNVIDLVDPLISESG---FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 664 ------~------~~~~~~~d~~l~~~~---~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. ....+.....+.... .......+.+++.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0 000000000000000 1122467889999999999999999999988
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.92 E-value=6.4e-25 Score=242.57 Aligned_cols=199 Identities=17% Similarity=0.177 Sum_probs=141.8
Q ss_pred cccccc-cccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHh-cCCCCccceeeeEEEe----CCeeE
Q 004345 495 NNFQLA-NKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVIS-NLQHRNLVRLLGCCVE----REENM 567 (760)
Q Consensus 495 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~-~l~H~nIv~l~g~~~~----~~~~~ 567 (760)
++|.+. +.||+|+||.||++... +++.||||+++. ...+.+|+.++. ..+||||+++++++.. ....+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 467666 68999999999999964 688999999853 346778998874 4589999999999876 56789
Q ss_pred EEEeccCCCChhhhh-------------------------------------------------------ccccceeEec
Q 004345 568 LIYEYMPNKSLDSFL-------------------------------------------------------FDFGLARIFG 592 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L-------------------------------------------------------~DFGla~~~~ 592 (760)
|||||+++|+|.++| +|||+++...
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 999999999997653 3899998654
Q ss_pred CCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccc-cHHHHHHHhccCCCccccc
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFEL-TLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 671 (760)
... .....+||+.|+|||++....++.++|||||||++|||++|+.||......... ....... .+.. ...
T Consensus 216 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~~-~~~ 287 (400)
T 1nxk_A 216 SHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQY-EFP 287 (400)
T ss_dssp --------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTCC-CCC
T ss_pred CCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCcc-cCC
Confidence 221 223467899999999999999999999999999999999999999643322110 1111111 0000 000
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.+ ........+.+++.+||+.||++|||+.||++.
T Consensus 288 ~~-----~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 288 NP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TT-----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred Cc-----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 001122457789999999999999999999983
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-25 Score=233.41 Aligned_cols=201 Identities=18% Similarity=0.281 Sum_probs=152.4
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCc---------cchHhHHHHHHHHhcCC-CCccceeeeEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG---------QGQEEFMNEVMVISNLQ-HRNLVRLLGCCVE 562 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---------~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~ 562 (760)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468999999999999999999965 688999999864321 22456889999999995 9999999999999
Q ss_pred CCeeEEEEeccCCCChhhhh--------------------------------------------------ccccceeEec
Q 004345 563 REENMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFG 592 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~ 592 (760)
.+..++||||+++++|.++| +|||+++.+.
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 175 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence 99999999999999998763 3999998764
Q ss_pred CCCcccccceeeeeccccCccccc------cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCC
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAM------EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 666 (760)
... ......|++.|+|||.+. ...++.++||||||+++|||++|+.|+...... ....... .+.
T Consensus 176 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~----~~~ 245 (298)
T 1phk_A 176 PGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM---LMLRMIM----SGN 245 (298)
T ss_dssp TTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH----HTC
T ss_pred CCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH---HHHHHHh----cCC
Confidence 332 223457899999999985 456889999999999999999999998643221 1111111 111
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 667 VIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 667 ~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. ....+ ........+.+++.+||+.||++|||+.|+++
T Consensus 246 ~-~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 246 Y-QFGSP-----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp C-CCCTT-----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred c-ccCcc-----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0 00000 00112346778999999999999999999976
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-25 Score=232.25 Aligned_cols=200 Identities=25% Similarity=0.314 Sum_probs=151.9
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++++++......++|+
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 468999999999999999999965 6889999998654 2345678999999999999999999999999999999999
Q ss_pred eccCCCChhhhh-----------------------------------------------------ccccceeEecCCCcc
Q 004345 571 EYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 571 Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||+++++|.+++ +|||+++......
T Consensus 101 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~-- 178 (287)
T 2wei_A 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-- 178 (287)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS--
T ss_pred EccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC--
Confidence 999999997652 3888876543222
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......+++.|+|||.+.+ .++.++||||||+++|||++|+.||...... ...... ..+...... +.. .
T Consensus 179 -~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~----~~~~~~~~~-~~~-~ 247 (287)
T 2wei_A 179 -KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DILKRV----ETGKYAFDL-PQW-R 247 (287)
T ss_dssp -SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH----HHCCCCCCS-GGG-T
T ss_pred -ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH---HHHHHH----HcCCCCCCc-hhh-h
Confidence 1223468899999998865 5899999999999999999999998643221 111111 111110000 000 1
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. ....+.+++.+||+.||++|||+.|+++
T Consensus 248 ~----~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 248 T----ISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp T----SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred h----cCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1 1245778899999999999999999987
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.9e-25 Score=239.86 Aligned_cols=204 Identities=13% Similarity=0.119 Sum_probs=156.7
Q ss_pred HHHhccccccccccccCCceeEEEEE------ecCCcEEEEEEecccCccchHhHHHHHHHHhcCC---CCccceeeeEE
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGK------LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ---HRNLVRLLGCC 560 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~---H~nIv~l~g~~ 560 (760)
+....++|++.+.||+|+||.||+|. ..+++.||||+++.. ...++.+|++++.+++ |+||+++++++
T Consensus 60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 33456789999999999999999994 446889999999643 4567888998888887 99999999999
Q ss_pred EeCCeeEEEEeccCCCChhhhh----------------------------------------------------------
Q 004345 561 VEREENMLIYEYMPNKSLDSFL---------------------------------------------------------- 582 (760)
Q Consensus 561 ~~~~~~~lV~Ey~~~gsL~~~L---------------------------------------------------------- 582 (760)
...+..+|||||+++|+|.++|
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC----
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccc
Confidence 9999999999999999998763
Q ss_pred --------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccH
Q 004345 583 --------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTL 654 (760)
Q Consensus 583 --------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~ 654 (760)
+|||+|+.+............+||+.|||||++.+..++.++|||||||++|||++|+.||.......
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---- 292 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE---- 292 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE----
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc----
Confidence 28999986643333333445679999999999999999999999999999999999999984221110
Q ss_pred HHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCC-CCHHHHHHHHhcccc
Q 004345 655 LGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDR-PNMPTVVSMLNSEIK 717 (760)
Q Consensus 655 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~R-Pt~~ev~~~L~~~~~ 717 (760)
..+...+..... .+.+.+++..|++.+|.+| |++.++.+.|++.+.
T Consensus 293 --------------~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 293 --------------CKPEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp --------------EEECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred --------------eeechhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 001111111112 2345567778999999998 788899888887654
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-25 Score=241.51 Aligned_cols=213 Identities=16% Similarity=0.230 Sum_probs=151.7
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeC-----Cee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER-----EEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~-----~~~ 566 (760)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999954 68899999997543 23346799999999999999999999999765 368
Q ss_pred EEEEeccCCCChhhh-------------------------------------------------hccccceeEecCCCcc
Q 004345 567 MLIYEYMPNKSLDSF-------------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~-------------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
++||||++ |+|.++ |+|||+++........
T Consensus 106 ~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 184 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184 (364)
T ss_dssp EEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB
T ss_pred EEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCc
Confidence 99999998 477654 2499999876533222
Q ss_pred c-ccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCc---ccc--
Q 004345 598 A-ATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNV---IDL-- 670 (760)
Q Consensus 598 ~-~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-- 670 (760)
. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||......... ............ ...
T Consensus 185 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~ 261 (364)
T 3qyz_A 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL---NHILGILGSPSQEDLNCIIN 261 (364)
T ss_dssp CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHH---HHHHHHHCSCCHHHHHTCCC
T ss_pred cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHH---HHHHHHhCCCCHHHHHHhhh
Confidence 1 2234589999999998765 45899999999999999999999998654332211 111111110000 000
Q ss_pred ------ccccc-cCCCC-----HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 671 ------VDPLI-SESGF-----KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 671 ------~d~~l-~~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..... ..... ......+.+++.+||+.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 00000 011245788999999999999999999987
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-25 Score=247.79 Aligned_cols=149 Identities=21% Similarity=0.433 Sum_probs=117.8
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeC-----Ce
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER-----EE 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~-----~~ 565 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++|++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999964 67899999997542 23456899999999999999999999999876 56
Q ss_pred eEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCC
Q 004345 566 NMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~ 595 (760)
.++||||++ ++|.+++ +|||+++......
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 183 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK 183 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC----
T ss_pred EEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccc
Confidence 899999987 5776652 4999999764332
Q ss_pred cc--------------------cccceeeeeccccCcccc-ccCCCCccchhHHHHHHHHHHHhCCCCC
Q 004345 596 DQ--------------------AATKRLVGTYGYMSPEYA-MEGRFSEKSDVFSFGVLLLEIVSGRKNT 643 (760)
Q Consensus 596 ~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~s~ksDVwSfGv~l~ElltG~~p~ 643 (760)
.. ......+||+.|+|||++ ....++.++|||||||++|||++|..|+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 184 DTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp ---------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 11 122456899999999986 4566999999999999999999865554
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-25 Score=244.73 Aligned_cols=211 Identities=18% Similarity=0.245 Sum_probs=146.2
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe------eE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE------NM 567 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~------~~ 567 (760)
..+|++.+.||+|+||.||+|+...+..||+|++.... +...+|++++++++||||+++++++..... .+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 35799999999999999999998777779999885432 223479999999999999999999976443 78
Q ss_pred EEEeccCCCChhhh------------------------------------------------------hccccceeEecC
Q 004345 568 LIYEYMPNKSLDSF------------------------------------------------------LFDFGLARIFGG 593 (760)
Q Consensus 568 lV~Ey~~~gsL~~~------------------------------------------------------L~DFGla~~~~~ 593 (760)
+||||++++.+... |+|||+++.+..
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 99999987543211 259999987643
Q ss_pred CCcccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHH--------Hh---
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAW--------KL--- 661 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~--------~~--- 661 (760)
... .....||+.|+|||.+.+. .++.++|||||||++|||++|+.||......+....+.... ..
T Consensus 195 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 195 GEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp TCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred CCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 322 2235789999999998765 59999999999999999999999997543221111110000 00
Q ss_pred -ccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 662 -WNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 662 -~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.............+...........+.+++.+||+.||.+|||+.|+++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000000000000000111123568889999999999999999999873
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-25 Score=242.77 Aligned_cols=220 Identities=19% Similarity=0.264 Sum_probs=142.9
Q ss_pred HHHHHhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe-
Q 004345 488 EELANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE- 565 (760)
Q Consensus 488 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~- 565 (760)
++.....++|++.+.||+|+||.||+|+.. +++.||||++... ......+.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455667789999999999999999999964 6899999998643 3344567888999999999999999999976443
Q ss_pred ------eEEEEeccCCCChhhh--------------------------------------------------------hc
Q 004345 566 ------NMLIYEYMPNKSLDSF--------------------------------------------------------LF 583 (760)
Q Consensus 566 ------~~lV~Ey~~~gsL~~~--------------------------------------------------------L~ 583 (760)
.++||||++++.+..+ |+
T Consensus 95 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~ 174 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLC 174 (360)
T ss_dssp CTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEEC
T ss_pred cccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEe
Confidence 7899999987532110 24
Q ss_pred cccceeEecCCCcccccceeeeeccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH----
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA---- 658 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~---- 658 (760)
|||+++.+..... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||...............
T Consensus 175 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 251 (360)
T 3e3p_A 175 DFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCP 251 (360)
T ss_dssp CCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred eCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCC
Confidence 9999987643322 22356899999999987654 899999999999999999999998654322111111000
Q ss_pred ----HHhccCC-Cccccccc------cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 659 ----WKLWNDN-NVIDLVDP------LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 659 ----~~~~~~~-~~~~~~d~------~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
+...... ...+..+. .............+.+++.+||+.||++|||+.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000000 00000000 00001111134678899999999999999999999873
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-25 Score=260.77 Aligned_cols=199 Identities=24% Similarity=0.290 Sum_probs=155.0
Q ss_pred hccccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~ 567 (760)
..++|++.++||+|+||.||+|+.. +++.||||++++. .....+.+.+|..++..+ +||||+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999999964 6788999999753 234567789999999988 7999999999999999999
Q ss_pred EEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcc
Q 004345 568 LIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
|||||+++|+|..+| +|||+++......
T Consensus 419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~-- 496 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-- 496 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT--
T ss_pred EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC--
Confidence 999999999998763 4999998643222
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......+||+.|||||++....++.++|||||||+||||++|+.||...... .+ ..... .... .
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~---~~---~~~i~-~~~~------~--- 560 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---EL---FQSIM-EHNV------A--- 560 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH---HHHHH-SSCC------C---
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH---HH---HHHHH-hCCC------C---
Confidence 2334578999999999999999999999999999999999999999643221 11 11111 1110 0
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCH-----HHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNM-----PTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~-----~ev~~ 710 (760)
.+......+.+++.+||+.||++||++ .||++
T Consensus 561 -~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 561 -YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred -CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 111122457788899999999999998 66654
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-25 Score=237.35 Aligned_cols=201 Identities=19% Similarity=0.287 Sum_probs=147.0
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--------ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--------GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--------~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~ 564 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 467999999999999999999964 67899999986432 122346899999999999999999999987654
Q ss_pred eeEEEEeccCCCChhhhh-----------------------------------------------------ccccceeEe
Q 004345 565 ENMLIYEYMPNKSLDSFL-----------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~ 591 (760)
.++||||+++++|.+++ +|||+++..
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 167 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred -eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence 89999999999997652 389988876
Q ss_pred cCCCcccccceeeeeccccCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcc
Q 004345 592 GGNQDQAATKRLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVI 668 (760)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (760)
.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||....... .+...... +..
T Consensus 168 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~----~~~- 237 (322)
T 2ycf_A 168 GETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQITS----GKY- 237 (322)
T ss_dssp CCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHHH----TCC-
T ss_pred cccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHHh----Ccc-
Confidence 4221 122356899999999974 5678999999999999999999999986433221 11111111 100
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 669 DLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 669 ~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.. .+..... ....+.+++.+||+.||++|||+.++++
T Consensus 238 ~~-~~~~~~~----~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 238 NF-IPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CC-CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cc-Cchhhhh----cCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00 0000011 1246778999999999999999999985
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.1e-26 Score=248.88 Aligned_cols=190 Identities=12% Similarity=0.071 Sum_probs=142.3
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHH---HHHhcCCCCccceee-------e
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEV---MVISNLQHRNLVRLL-------G 558 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~---~~l~~l~H~nIv~l~-------g 558 (760)
..++|++.+.||+|+||.||+|+. .+++.||||++... .....+.|.+|+ +++++++|||||+++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 457899999999999999999996 56899999999743 334557899999 556666899999998 6
Q ss_pred EEEeCC-----------------eeEEEEeccCCCChhhhh---------------------------------------
Q 004345 559 CCVERE-----------------ENMLIYEYMPNKSLDSFL--------------------------------------- 582 (760)
Q Consensus 559 ~~~~~~-----------------~~~lV~Ey~~~gsL~~~L--------------------------------------- 582 (760)
++...+ ..+|||||+ +|+|.++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 229 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH 229 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 665543 278999999 67887642
Q ss_pred ------------------ccccceeEecCCCcccccceeeeeccccCccccccC-----------CCCccchhHHHHHHH
Q 004345 583 ------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG-----------RFSEKSDVFSFGVLL 633 (760)
Q Consensus 583 ------------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~ksDVwSfGv~l 633 (760)
+|||+++.... ......| +.|+|||++... .++.++|||||||++
T Consensus 230 rDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 39999986321 2234567 999999999887 899999999999999
Q ss_pred HHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 634 LEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 634 ~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
|||++|+.||........ ...+.. .. ... ...+.+++.+||+.||++|||+.|+++
T Consensus 304 ~elltg~~Pf~~~~~~~~---------------~~~~~~-~~-~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALGG---------------SEWIFR-SC-KNI----PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------CC---------------SGGGGS-SC-CCC----CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCcccccccc---------------hhhhhh-hc-cCC----CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999853221110 001110 00 111 245778889999999999999999986
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-25 Score=237.89 Aligned_cols=212 Identities=23% Similarity=0.324 Sum_probs=150.5
Q ss_pred HhccccccccccccCCceeEEEEEe--cCCcEEEEEEecccC--ccchHhHHHHHHHHhcC---CCCccceeeeEEE---
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKL--QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNL---QHRNLVRLLGCCV--- 561 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l---~H~nIv~l~g~~~--- 561 (760)
...++|++.+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.+++++ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3457899999999999999999997 467899999987432 22345678888887766 8999999999997
Q ss_pred --eCCeeEEEEeccCCCChhhhh----------------------------------------------------ccccc
Q 004345 562 --EREENMLIYEYMPNKSLDSFL----------------------------------------------------FDFGL 587 (760)
Q Consensus 562 --~~~~~~lV~Ey~~~gsL~~~L----------------------------------------------------~DFGl 587 (760)
.....++||||++ |+|.+++ +|||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcc
Confidence 4567899999998 5876652 39999
Q ss_pred eeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC--
Q 004345 588 ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN-- 665 (760)
Q Consensus 588 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~-- 665 (760)
++..... .......||+.|+|||.+....++.++||||||+++|||++|+.||....... ............
T Consensus 167 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 167 ARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGE 240 (326)
T ss_dssp CCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCG
T ss_pred cccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHHHHHcCCCCc
Confidence 8765322 12334678999999999999999999999999999999999999986433221 111111111000
Q ss_pred -Ccc-------ccccc---cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 666 -NVI-------DLVDP---LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 666 -~~~-------~~~d~---~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
... ..... .............+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 00000 0000011112245678899999999999999999985
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.92 E-value=9e-25 Score=245.97 Aligned_cols=146 Identities=21% Similarity=0.427 Sum_probs=105.5
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeC-----Ce
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER-----EE 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~-----~~ 565 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+++.+|+++|++++|||||++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999854 68899999996532 23456799999999999999999999999543 56
Q ss_pred eEEEEeccCCCChhhh--------------------------------------------------hccccceeEecCCC
Q 004345 566 NMLIYEYMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQ 595 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~ 595 (760)
.++||||+. ++|..+ |+|||+++......
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 210 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE 210 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCT
T ss_pred EEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCcc
Confidence 899999985 566554 24999998764221
Q ss_pred cc-------------------------cccceeeeeccccCccccc-cCCCCccchhHHHHHHHHHHHhCC
Q 004345 596 DQ-------------------------AATKRLVGTYGYMSPEYAM-EGRFSEKSDVFSFGVLLLEIVSGR 640 (760)
Q Consensus 596 ~~-------------------------~~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSfGv~l~ElltG~ 640 (760)
.. ......+||+.|+|||++. ...++.++|||||||+||||++|.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~ 281 (458)
T 3rp9_A 211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281 (458)
T ss_dssp TCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred ccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence 10 1223457899999999864 567999999999999999999943
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-25 Score=241.64 Aligned_cols=209 Identities=20% Similarity=0.283 Sum_probs=136.8
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeC------C
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER------E 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~------~ 564 (760)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 47899999999999999999985 568999999997532 23456789999999999999999999998754 5
Q ss_pred eeEEEEeccCCCChhhh-------------------------------------------------hccccceeEecCCC
Q 004345 565 ENMLIYEYMPNKSLDSF-------------------------------------------------LFDFGLARIFGGNQ 595 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~-------------------------------------------------L~DFGla~~~~~~~ 595 (760)
..++|+||+ +++|.++ |+|||+++.....
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~- 185 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE- 185 (367)
T ss_dssp CCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-----------
T ss_pred eEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccccc-
Confidence 679999999 5777654 2499999865321
Q ss_pred cccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC---------
Q 004345 596 DQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN--------- 665 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 665 (760)
.....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......... ..........
T Consensus 186 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l---~~i~~~~g~p~~~~~~~~~ 258 (367)
T 2fst_X 186 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL---KLILRLVGTPGAELLKKIS 258 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCSCCHHHHTTCC
T ss_pred ----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCCHHHHHHhh
Confidence 234578999999999987 67999999999999999999999999644322111 1111111000
Q ss_pred --Ccccccccccc-CCCCHH-----HHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 666 --NVIDLVDPLIS-ESGFKM-----EIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 666 --~~~~~~d~~l~-~~~~~~-----~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
...+.+..... ...... ....+.+++.+||+.||++|||+.|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00000000000 000111 12457889999999999999999999873
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-25 Score=237.12 Aligned_cols=202 Identities=24% Similarity=0.399 Sum_probs=128.1
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHH-HHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVM-VISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~-~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
.++|++.+.||+|+||.||+|... +++.||||++.... .....++.+|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 467889999999999999999964 78999999997542 233456667766 778889999999999999999999999
Q ss_pred eccCCCChhhh--------------------------------------------------------hccccceeEecCC
Q 004345 571 EYMPNKSLDSF--------------------------------------------------------LFDFGLARIFGGN 594 (760)
Q Consensus 571 Ey~~~gsL~~~--------------------------------------------------------L~DFGla~~~~~~ 594 (760)
||+++ +|.++ |+|||+++.+...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence 99986 54332 2499998765322
Q ss_pred CcccccceeeeeccccCcccc----ccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccc
Q 004345 595 QDQAATKRLVGTYGYMSPEYA----MEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDL 670 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~----~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (760)
. ......||+.|+|||.+ ....++.++||||||+++|||++|+.||....... ...... ..+..
T Consensus 180 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~-~~~~~--- 247 (327)
T 3aln_A 180 I---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-----DQLTQV-VKGDP--- 247 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCC-CCSCC---
T ss_pred c---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-----HHHHHH-hcCCC---
Confidence 2 12234789999999998 45678999999999999999999999986432110 000000 01110
Q ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 671 VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 671 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+.+...........+.+++.+||+.||++|||+.+|++
T Consensus 248 --~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 --PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp --CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11111111112346778899999999999999999976
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-25 Score=247.36 Aligned_cols=205 Identities=20% Similarity=0.263 Sum_probs=144.2
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCC------eeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE------ENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~------~~~ 567 (760)
.+|++.+.||+|+||.||+|+.. +++.||||++.... +.+.+|+++|++++|||||++++++.... ..+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46889999999999999999975 68999999986432 23457999999999999999999986422 357
Q ss_pred EEEeccCCCChhhh-------------------------------------------------------hccccceeEec
Q 004345 568 LIYEYMPNKSLDSF-------------------------------------------------------LFDFGLARIFG 592 (760)
Q Consensus 568 lV~Ey~~~gsL~~~-------------------------------------------------------L~DFGla~~~~ 592 (760)
+||||++++ |... |+|||+++.+.
T Consensus 130 lv~e~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 130 LVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEEECCCEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eehhccccc-HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 999999863 2211 24999999764
Q ss_pred CCCcccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC-------
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND------- 664 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~------- 664 (760)
.... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+. +.... .....
T Consensus 209 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~--l~~i~-~~lg~p~~~~~~ 282 (420)
T 1j1b_A 209 RGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ--LVEII-KVLGTPTREQIR 282 (420)
T ss_dssp TTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH-HHHCSCCHHHHH
T ss_pred cCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHH-HHhCCCCHHHHH
Confidence 3322 2235789999999999765 799999999999999999999999864332211 11111 11000
Q ss_pred ---CCccccccccccCC-----CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 665 ---NNVIDLVDPLISES-----GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 665 ---~~~~~~~d~~l~~~-----~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+..-+.+... ........+.+++.+||+.||++|||+.|+++
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 00111111111110 01111256788999999999999999999986
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-25 Score=247.58 Aligned_cols=147 Identities=20% Similarity=0.337 Sum_probs=121.9
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcC------CCCccceeeeEEEeCCee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNL------QHRNLVRLLGCCVEREEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l------~H~nIv~l~g~~~~~~~~ 566 (760)
..+|++.++||+|+||.||+|... +++.||||++... ....+.+.+|+.++..+ +|+||+++++++......
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 467999999999999999999864 5889999999653 23346778888888766 578999999999999999
Q ss_pred EEEEeccCCCChhhhh------------------------------------------------------ccccceeEec
Q 004345 567 MLIYEYMPNKSLDSFL------------------------------------------------------FDFGLARIFG 592 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~ 592 (760)
++||||+. ++|.+++ +|||+++...
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 99999996 5766542 4999987643
Q ss_pred CCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCc
Q 004345 593 GNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYH 647 (760)
Q Consensus 593 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~ 647 (760)
.. .....||+.|+|||++....++.++|||||||++|||++|+.||....
T Consensus 254 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 254 QR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Cc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 21 223578999999999999999999999999999999999999986543
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-25 Score=239.76 Aligned_cols=213 Identities=20% Similarity=0.295 Sum_probs=149.4
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeC-----Cee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER-----EEN 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~-----~~~ 566 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999965 68899999997533 23456788999999999999999999998764 678
Q ss_pred EEEEeccCCCChhhhh-------------------------------------------------ccccceeEecCCCcc
Q 004345 567 MLIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
++||||++ ++|.+++ +|||+++.+......
T Consensus 90 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 168 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168 (353)
T ss_dssp EEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred EEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccccccc
Confidence 99999997 5776642 499999876432211
Q ss_pred c--------ccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC---
Q 004345 598 A--------ATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN--- 665 (760)
Q Consensus 598 ~--------~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--- 665 (760)
. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||......... ..........
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL---LLIFGIIGTPHSD 245 (353)
T ss_dssp -----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCCCST
T ss_pred ccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH---HHHHHHhCCCchh
Confidence 1 1223578999999998765 67999999999999999999999998644322111 1111111000
Q ss_pred -Ccc--------cccccccc-CCCC-----HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 666 -NVI--------DLVDPLIS-ESGF-----KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 666 -~~~--------~~~d~~l~-~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
... +.+..... .... ......+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 00000000 0000 011245778999999999999999999987
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-25 Score=242.38 Aligned_cols=209 Identities=19% Similarity=0.301 Sum_probs=146.9
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCee----
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREEN---- 566 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~---- 566 (760)
.++|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999999854 68999999997542 23356789999999999999999999999887655
Q ss_pred --EEEEeccCCCChhhh------------------------------------------------hccccceeEecCCCc
Q 004345 567 --MLIYEYMPNKSLDSF------------------------------------------------LFDFGLARIFGGNQD 596 (760)
Q Consensus 567 --~lV~Ey~~~gsL~~~------------------------------------------------L~DFGla~~~~~~~~ 596 (760)
++||||+. ++|.++ |+|||+++.....
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~-- 197 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-- 197 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------
T ss_pred eEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC--
Confidence 99999997 566553 2499999865322
Q ss_pred ccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC----------
Q 004345 597 QAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN---------- 665 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 665 (760)
.....||+.|+|||.+.. ..++.++|||||||++|||++|+.||......+. ...........
T Consensus 198 ---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~ 271 (371)
T 4exu_A 198 ---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFVQKLND 271 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCHHHHTTCSC
T ss_pred ---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCcHHHHHHhhh
Confidence 223568999999999987 6799999999999999999999999964322111 11111100000
Q ss_pred -CccccccccccC-CC-----CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 666 -NVIDLVDPLISE-SG-----FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 666 -~~~~~~d~~l~~-~~-----~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.....+...... .. .......+.+++.+||+.||++|||+.|+++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 272 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000000000 00 00113567889999999999999999999873
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-24 Score=230.62 Aligned_cols=201 Identities=24% Similarity=0.361 Sum_probs=142.2
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEe----------
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE---------- 562 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~---------- 562 (760)
.++|++.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 46799999999999999999996 47899999999643 3445789999999999999999999999865
Q ss_pred ---CCeeEEEEeccCCCChhhhh---------------------------------------------------ccccce
Q 004345 563 ---REENMLIYEYMPNKSLDSFL---------------------------------------------------FDFGLA 588 (760)
Q Consensus 563 ---~~~~~lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla 588 (760)
....++||||+++|+|.++| +|||++
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcch
Confidence 35679999999999998763 399998
Q ss_pred eEecCCCc------------ccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHH
Q 004345 589 RIFGGNQD------------QAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL 655 (760)
Q Consensus 589 ~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~ 655 (760)
+....... ........||+.|+|||.+... .++.++|||||||++|||++ |+..... .....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~--~~~~~ 238 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME--RVNIL 238 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH--HHHHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh--HHHHH
Confidence 76532210 1122345689999999999764 78999999999999999998 4321111 11111
Q ss_pred HHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 656 GYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 656 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....... ..+...........+.+++.+||+.||.+|||+.++++
T Consensus 239 ----~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 239 ----KKLRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp ----HHHHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ----Hhccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 1111110 01111122223355778999999999999999999987
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-24 Score=235.65 Aligned_cols=149 Identities=22% Similarity=0.338 Sum_probs=122.9
Q ss_pred HhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCC-CC-----ccceeeeEEEeCC
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HR-----NLVRLLGCCVERE 564 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~-----nIv~l~g~~~~~~ 564 (760)
...++|++.+.||+|+||.||+|+.. +++.||||+++.. ....+++.+|+.++..++ |+ +|+++++++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 34578999999999999999999965 6789999999743 234567788999888875 55 4999999999999
Q ss_pred eeEEEEeccCCCChhhhh--------------------------------------------------------ccccce
Q 004345 565 ENMLIYEYMPNKSLDSFL--------------------------------------------------------FDFGLA 588 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~L--------------------------------------------------------~DFGla 588 (760)
..+|||||+++ +|.++| +|||++
T Consensus 130 ~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 130 HLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred ceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 99999999964 776542 389998
Q ss_pred eEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCc
Q 004345 589 RIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYH 647 (760)
Q Consensus 589 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~ 647 (760)
+..... .....||+.|+|||++....++.++|||||||++|||++|+.||....
T Consensus 209 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 209 CQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp EETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 875322 223578999999999999999999999999999999999999997543
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=241.98 Aligned_cols=200 Identities=21% Similarity=0.270 Sum_probs=142.7
Q ss_pred hccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEe
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
...+|++.+.||+|+||+|+.....+++.||||++... ..+.+.+|+.+++++ +|||||++++++.+....+||||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPE---CFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTT---TEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 34568999999999999976555567899999999643 234567899999999 79999999999999999999999
Q ss_pred ccCCCChhhhh--------------------------------------------------------ccccceeEecCCC
Q 004345 572 YMPNKSLDSFL--------------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------------~DFGla~~~~~~~ 595 (760)
|++ |+|.+++ +|||+++.+....
T Consensus 99 ~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp CCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred CCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 996 4766542 4999998764332
Q ss_pred cc-cccceeeeeccccCccccc---cCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccc
Q 004345 596 DQ-AATKRLVGTYGYMSPEYAM---EGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDL 670 (760)
Q Consensus 596 ~~-~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (760)
.. .......||+.|+|||++. ...++.++|||||||++|||++ |..||....... ........ ....
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~-------~~~~~~~~-~~~~ 249 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ-------ANILLGAC-SLDC 249 (432)
T ss_dssp --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH-------HHHHTTCC-CCTT
T ss_pred cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH-------HHHHhccC-Cccc
Confidence 11 2233467999999999997 4567889999999999999999 888885322110 01111110 0111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 671 VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 671 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.. ........+.+++.+||+.||++|||+.||++
T Consensus 250 ~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 250 LH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp SC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 10 11223345678999999999999999999984
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.2e-25 Score=238.92 Aligned_cols=202 Identities=9% Similarity=0.024 Sum_probs=133.8
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCc---cchHhHHHHHH---HHhcCCCCccceee-------eE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG---QGQEEFMNEVM---VISNLQHRNLVRLL-------GC 559 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~f~~E~~---~l~~l~H~nIv~l~-------g~ 559 (760)
..+|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+. +|++ +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 456899999999999999999964 789999999986432 33456778854 5555 799988755 45
Q ss_pred EEeC-----------------CeeEEEEeccCCCChhhhh----------------------------------------
Q 004345 560 CVER-----------------EENMLIYEYMPNKSLDSFL---------------------------------------- 582 (760)
Q Consensus 560 ~~~~-----------------~~~~lV~Ey~~~gsL~~~L---------------------------------------- 582 (760)
+... ...+|||||++ |+|.++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHr 218 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHG 218 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccC
Confidence 4433 33799999999 8887652
Q ss_pred -----------------ccccceeEecCCCcccccceeeeeccccCcccccc--CCCCccchhHHHHHHHHHHHhCCCCC
Q 004345 583 -----------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME--GRFSEKSDVFSFGVLLLEIVSGRKNT 643 (760)
Q Consensus 583 -----------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSfGv~l~ElltG~~p~ 643 (760)
+|||+++..... .....+|+.|+|||++.. ..++.++|||||||++|||++|+.||
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 399999875321 113456799999999987 67999999999999999999999999
Q ss_pred CCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 644 SFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......... .+........................+.+++.+||+.||++|||+.|+++
T Consensus 294 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKG--------SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTT--------CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCccccc--------chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 744222110 00000000000001111111112356778899999999999999999975
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=240.89 Aligned_cols=214 Identities=18% Similarity=0.289 Sum_probs=134.6
Q ss_pred ccccc-ccccccCCceeEEEEEec---CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEe--CCeeEE
Q 004345 495 NNFQL-ANKLGQGGFGPVYKGKLQ---DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE--REENML 568 (760)
Q Consensus 495 ~~~~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~--~~~~~l 568 (760)
+.|++ .++||+|+||.||+|+.. +++.||||++... ...+.+.+|+.+|++++|||||++++++.. ....+|
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34665 458999999999999965 5788999999643 234578999999999999999999999965 668899
Q ss_pred EEeccCCCChhhh---------------------------------------------------------------hccc
Q 004345 569 IYEYMPNKSLDSF---------------------------------------------------------------LFDF 585 (760)
Q Consensus 569 V~Ey~~~gsL~~~---------------------------------------------------------------L~DF 585 (760)
||||+++ +|.++ |+||
T Consensus 98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 9999975 44321 2499
Q ss_pred cceeEecCCCcc-cccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccc------cccHHHH
Q 004345 586 GLARIFGGNQDQ-AATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEF------ELTLLGY 657 (760)
Q Consensus 586 Gla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~------~~~~~~~ 657 (760)
|+++.+...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.....+. .......
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~ 256 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256 (405)
T ss_dssp TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHH
T ss_pred CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHH
Confidence 999876432211 223346789999999999874 59999999999999999999999996433210 0011111
Q ss_pred HHHhccC---CCccccc------------cccccCCCCH---------HHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 658 AWKLWND---NNVIDLV------------DPLISESGFK---------MEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 658 ~~~~~~~---~~~~~~~------------d~~l~~~~~~---------~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
....+.. .....+. .......... .....+.+++.+||+.||++|||+.|+++.
T Consensus 257 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 257 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 1111110 0000000 0000000000 002457789999999999999999999883
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-24 Score=232.80 Aligned_cols=210 Identities=20% Similarity=0.270 Sum_probs=150.9
Q ss_pred ccccccccccccCCceeEEEEEe--cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCC------ccceeeeEEEeCCe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL--QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHR------NLVRLLGCCVEREE 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~------nIv~l~g~~~~~~~ 565 (760)
.++|++.+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|+.++++++|+ +|+++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35799999999999999999986 36789999999643 23456788999999888665 49999999999999
Q ss_pred eEEEEeccCCCChhhhh---------------------------------------------------------------
Q 004345 566 NMLIYEYMPNKSLDSFL--------------------------------------------------------------- 582 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L--------------------------------------------------------------- 582 (760)
.++||||+ +++|.+++
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99999999 77876652
Q ss_pred --------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccH
Q 004345 583 --------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTL 654 (760)
Q Consensus 583 --------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~ 654 (760)
+|||+++.... ......||+.|+|||.+....++.++|||||||++|||++|+.||...........
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 245 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDE-----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 245 (339)
T ss_dssp ESCCCEEECCCSSCEETTS-----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH
T ss_pred ccCCCceEeeCcccccCcc-----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 26676665321 12235789999999999999999999999999999999999999975433221111
Q ss_pred HHHHH--------HhccCCCcc------------------ccccccc-cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHH
Q 004345 655 LGYAW--------KLWNDNNVI------------------DLVDPLI-SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPT 707 (760)
Q Consensus 655 ~~~~~--------~~~~~~~~~------------------~~~d~~l-~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~e 707 (760)
..... ......... ....+.. ...........+.+++.+||+.||++|||+.|
T Consensus 246 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e 325 (339)
T 1z57_A 246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLRE 325 (339)
T ss_dssp HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHH
Confidence 11100 000000000 0000000 01112344577889999999999999999999
Q ss_pred HHH
Q 004345 708 VVS 710 (760)
Q Consensus 708 v~~ 710 (760)
+++
T Consensus 326 ll~ 328 (339)
T 1z57_A 326 ALK 328 (339)
T ss_dssp HTT
T ss_pred Hhc
Confidence 976
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-24 Score=236.82 Aligned_cols=208 Identities=19% Similarity=0.304 Sum_probs=146.4
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe-----
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE----- 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~----- 565 (760)
.++|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 367899999999999999999964 68999999997542 2335678999999999999999999999987654
Q ss_pred -eEEEEeccCCCChhhh------------------------------------------------hccccceeEecCCCc
Q 004345 566 -NMLIYEYMPNKSLDSF------------------------------------------------LFDFGLARIFGGNQD 596 (760)
Q Consensus 566 -~~lV~Ey~~~gsL~~~------------------------------------------------L~DFGla~~~~~~~~ 596 (760)
.++||||++ ++|.++ |+|||+++.....
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-- 179 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-- 179 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC------
T ss_pred eEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC--
Confidence 499999997 577654 2499998754321
Q ss_pred ccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhcc-----------C
Q 004345 597 QAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWN-----------D 664 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~-----------~ 664 (760)
.....+|+.|+|||.+.. ..++.++|||||||++|||++|+.||........ ......... .
T Consensus 180 ---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~ 253 (353)
T 3coi_A 180 ---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFVQKLND 253 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH---HHHHHHHHCBCCHHHHTTCSC
T ss_pred ---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHHHhh
Confidence 223578999999999886 6789999999999999999999999864332111 111111000 0
Q ss_pred CCcccccc---cccc---CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 665 NNVIDLVD---PLIS---ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 665 ~~~~~~~d---~~l~---~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......+. .... ..........+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 254 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000 0000 0011122356788999999999999999999986
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5e-24 Score=238.09 Aligned_cols=199 Identities=20% Similarity=0.215 Sum_probs=142.6
Q ss_pred ccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEEEeccC
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
.|.+.+.||+|+||+||.+...+++.||||++... ..+.+.+|+.++.++ +|||||++++++.+++..+|||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 35556889999999998776677999999998643 345688999999876 89999999999999999999999995
Q ss_pred CCChhhhh----------------------------------------------------------------------cc
Q 004345 575 NKSLDSFL----------------------------------------------------------------------FD 584 (760)
Q Consensus 575 ~gsL~~~L----------------------------------------------------------------------~D 584 (760)
|+|.++| +|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 5765442 38
Q ss_pred ccceeEecCCCccc--ccceeeeeccccCcccccc-------CCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccH
Q 004345 585 FGLARIFGGNQDQA--ATKRLVGTYGYMSPEYAME-------GRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTL 654 (760)
Q Consensus 585 FGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~ 654 (760)
||+++.+....... ......||+.|+|||++.. ..++.++|||||||++|||++ |+.||.......
T Consensus 172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---- 247 (434)
T 2rio_A 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE---- 247 (434)
T ss_dssp CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH----
T ss_pred cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH----
Confidence 88888765432211 2234579999999999975 678999999999999999999 899985332211
Q ss_pred HHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 655 LGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 655 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.......... +.+...........+.+++.+||+.||++|||+.+|++
T Consensus 248 ~~i~~~~~~~--------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 SNIIRGIFSL--------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHTCCCC--------CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHhcCCCCc--------ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 0111100000 01111122344567889999999999999999999986
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.7e-24 Score=234.87 Aligned_cols=210 Identities=16% Similarity=0.194 Sum_probs=147.9
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCC--------CCccceeeeEEE---
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ--------HRNLVRLLGCCV--- 561 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~--------H~nIv~l~g~~~--- 561 (760)
.++|++.++||+|+||.||+|+. .+++.||||+++.. ....+.+.+|+.++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 47899999999999999999985 46889999999643 334567899999999885 788999999988
Q ss_pred -eCCeeEEEEeccCCCChhhhh----------------------------------------------------------
Q 004345 562 -EREENMLIYEYMPNKSLDSFL---------------------------------------------------------- 582 (760)
Q Consensus 562 -~~~~~~lV~Ey~~~gsL~~~L---------------------------------------------------------- 582 (760)
.....+|||||+.+ +|.+++
T Consensus 115 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 115 VNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp TTEEEEEEEECCCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred CCCceEEEEEeccCc-cHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhh
Confidence 45678999999954 443221
Q ss_pred --------------------------------------------ccccceeEecCCCcccccceeeeeccccCccccccC
Q 004345 583 --------------------------------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618 (760)
Q Consensus 583 --------------------------------------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 618 (760)
+|||+++.... ......||+.|+|||++...
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~ 268 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK-----HFTEDIQTRQYRSLEVLIGS 268 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB-----CSCSCCSCGGGCCHHHHHTS
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc-----cCccCCCCCcccCChhhcCC
Confidence 14454443321 12234689999999999999
Q ss_pred CCCccchhHHHHHHHHHHHhCCCCCCCCccccccc---HHHHHHHhccC-------------------CCccccccc---
Q 004345 619 RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELT---LLGYAWKLWND-------------------NNVIDLVDP--- 673 (760)
Q Consensus 619 ~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~---~~~~~~~~~~~-------------------~~~~~~~d~--- 673 (760)
.++.++|||||||++|||++|+.||.......... ........... +....+.+.
T Consensus 269 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (397)
T 1wak_A 269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPW 348 (397)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCC
T ss_pred CCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCc
Confidence 99999999999999999999999997543322111 11111111000 000000000
Q ss_pred ----cc--cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 674 ----LI--SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 674 ----~l--~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+ ...........+.+++.+||+.||++|||+.|+++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 349 GLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred chhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00 01224556678899999999999999999999986
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.3e-24 Score=225.69 Aligned_cols=200 Identities=22% Similarity=0.398 Sum_probs=129.3
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCc-cc-hHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG-QG-QEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~-~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .. .+.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467899999999999999999975 789999999975432 22 233445556788889999999999999999999999
Q ss_pred eccCCCChhhh----------------------------------------------------hccccceeEecCCCccc
Q 004345 571 EYMPNKSLDSF----------------------------------------------------LFDFGLARIFGGNQDQA 598 (760)
Q Consensus 571 Ey~~~gsL~~~----------------------------------------------------L~DFGla~~~~~~~~~~ 598 (760)
||+ ++.+..+ |+|||+++.+....
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--- 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK--- 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc---
Confidence 999 3333222 24899887653322
Q ss_pred ccceeeeeccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 599 ATKRLVGTYGYMSPEYAM-----EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
......||+.|+|||.+. ...++.++||||||+++|||++|+.||....... ... ........ +
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~---~~~~~~~~------~ 248 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF--EVL---TKVLQEEP------P 248 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH--HHH---HHHHHSCC------C
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH--HHH---HHHhccCC------C
Confidence 122357899999999994 4568999999999999999999999986432211 111 11111100 0
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+... ......+.+++.+||+.||.+|||+.++++
T Consensus 249 ~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 249 LLPGH--MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCCSS--SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCcc--CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 01100 011245778889999999999999999987
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-24 Score=231.54 Aligned_cols=193 Identities=23% Similarity=0.408 Sum_probs=140.9
Q ss_pred HHhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc------cchHhHHHHHHHHhcC----CCCccceeeeE
Q 004345 491 ANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG------QGQEEFMNEVMVISNL----QHRNLVRLLGC 559 (760)
Q Consensus 491 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~------~~~~~f~~E~~~l~~l----~H~nIv~l~g~ 559 (760)
....++|++.+.||+|+||.||+|+. .+++.||||++..... .....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34457899999999999999999985 4688999999975422 2334577899999888 89999999999
Q ss_pred EEeCCeeEEEEec-cCCCChhhhh---------------------------------------------------ccccc
Q 004345 560 CVEREENMLIYEY-MPNKSLDSFL---------------------------------------------------FDFGL 587 (760)
Q Consensus 560 ~~~~~~~~lV~Ey-~~~gsL~~~L---------------------------------------------------~DFGl 587 (760)
+...+..++|+|| +.+++|.++| +|||+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcch
Confidence 9999999999999 7889987763 38999
Q ss_pred eeEecCCCcccccceeeeeccccCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCC
Q 004345 588 ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS-EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666 (760)
Q Consensus 588 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 666 (760)
++...... .....|+..|+|||++....+. .++||||||+++|||++|+.||..... .. . ..
T Consensus 187 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~-~----~~ 249 (312)
T 2iwi_A 187 GALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--------IL-E----AE 249 (312)
T ss_dssp CEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------HH-H----TC
T ss_pred hhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--------Hh-h----hc
Confidence 88764322 2345689999999999877664 589999999999999999999852110 00 0 00
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 667 VIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 667 ~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. .+.. .....+.+++.+||+.||++|||+.|+++
T Consensus 250 ~------~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 250 L------HFPA----HVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp C------CCCT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred c------CCcc----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0111 11245678899999999999999999987
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-24 Score=232.60 Aligned_cols=195 Identities=25% Similarity=0.411 Sum_probs=149.7
Q ss_pred HHHHhccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc------cchHhHHHHHHHHhcCC--CCccceeeeE
Q 004345 489 ELANATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG------QGQEEFMNEVMVISNLQ--HRNLVRLLGC 559 (760)
Q Consensus 489 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~------~~~~~f~~E~~~l~~l~--H~nIv~l~g~ 559 (760)
+.....++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.++++++ |+||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 3344567899999999999999999985 5788999999975422 13356889999999996 5999999999
Q ss_pred EEeCCeeEEEEeccCC-CChhhhh---------------------------------------------------ccccc
Q 004345 560 CVEREENMLIYEYMPN-KSLDSFL---------------------------------------------------FDFGL 587 (760)
Q Consensus 560 ~~~~~~~~lV~Ey~~~-gsL~~~L---------------------------------------------------~DFGl 587 (760)
+...+..++|+||+.+ ++|.+++ +|||+
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred EecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 9999999999999976 7887652 39999
Q ss_pred eeEecCCCcccccceeeeeccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCC
Q 004345 588 ARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF-SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666 (760)
Q Consensus 588 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 666 (760)
++...... .....||+.|+|||++....+ +.++||||||+++|||++|+.||..... .. .. .
T Consensus 197 ~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~~----~~-~ 259 (320)
T 3a99_A 197 GALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------II----RG-Q 259 (320)
T ss_dssp CEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------HH----HC-C
T ss_pred cccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--------hh----cc-c
Confidence 98764322 223568999999999987765 6889999999999999999999853110 00 00 0
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 667 VIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 667 ~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. ...... ...+.+++.+||+.||++|||+.||++
T Consensus 260 ~------~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 V------FFRQRV----SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp C------CCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c------cccccC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 011111 245778899999999999999999987
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8.8e-24 Score=230.89 Aligned_cols=210 Identities=17% Similarity=0.225 Sum_probs=149.8
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCC-----------CCccceeeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-----------HRNLVRLLGCCV 561 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~nIv~l~g~~~ 561 (760)
.++|++.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35799999999999999999995 57889999999643 234567889999998886 899999999998
Q ss_pred eCC----eeEEEEeccCCCChhhhh-------------------------------------------------------
Q 004345 562 ERE----ENMLIYEYMPNKSLDSFL------------------------------------------------------- 582 (760)
Q Consensus 562 ~~~----~~~lV~Ey~~~gsL~~~L------------------------------------------------------- 582 (760)
..+ ..++||||+ +++|.+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcc
Confidence 654 789999999 77776542
Q ss_pred ----ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccc---cHH
Q 004345 583 ----FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFEL---TLL 655 (760)
Q Consensus 583 ----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~---~~~ 655 (760)
+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...
T Consensus 176 ~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 176 QIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp EEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred eEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 388888765321 22357899999999999999999999999999999999999999743321110 011
Q ss_pred HHHHHhcc------------------CCCccccccc--------cc--cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHH
Q 004345 656 GYAWKLWN------------------DNNVIDLVDP--------LI--SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPT 707 (760)
Q Consensus 656 ~~~~~~~~------------------~~~~~~~~d~--------~l--~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~e 707 (760)
........ .......+.. .+ ....+......+.+++.+||+.||++|||+.|
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 11111000 0000000000 00 11234556678889999999999999999999
Q ss_pred HHH
Q 004345 708 VVS 710 (760)
Q Consensus 708 v~~ 710 (760)
+++
T Consensus 331 ll~ 333 (373)
T 1q8y_A 331 LVN 333 (373)
T ss_dssp HHT
T ss_pred Hhh
Confidence 988
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.3e-24 Score=230.39 Aligned_cols=204 Identities=20% Similarity=0.187 Sum_probs=125.4
Q ss_pred cccccccc-ccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHH-HHHhcCCCCccceeeeEEEe----CCee
Q 004345 494 TNNFQLAN-KLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEV-MVISNLQHRNLVRLLGCCVE----REEN 566 (760)
Q Consensus 494 ~~~~~~~~-~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~-~~l~~l~H~nIv~l~g~~~~----~~~~ 566 (760)
.++|++.+ .||+|+||.||+|... +++.||||++... ....+|+ ..+..++||||+++++++.. +...
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 46788855 6999999999999965 6899999998642 1222333 34567799999999999976 4458
Q ss_pred EEEEeccCCCChhhhh-------------------------------------------------------ccccceeEe
Q 004345 567 MLIYEYMPNKSLDSFL-------------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L-------------------------------------------------------~DFGla~~~ 591 (760)
++||||+++|+|.++| +|||+++..
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~ 181 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence 9999999999997763 388888765
Q ss_pred cCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccc
Q 004345 592 GGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (760)
... ......||+.|+|||.+....++.++||||||+++|||++|+.||......... ........... .
T Consensus 182 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~-~--- 250 (336)
T 3fhr_A 182 TQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS---PGMKRRIRLGQ-Y--- 250 (336)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------
T ss_pred ccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh---hhHHHhhhccc-c---
Confidence 322 223457899999999998888999999999999999999999998643221100 00000000000 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH--HHhcc
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS--MLNSE 715 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~--~L~~~ 715 (760)
.............+.+++.+||+.||++|||+.|+++ .+.+.
T Consensus 251 --~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 251 --GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp --CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred --ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 0000001112345778899999999999999999998 45443
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-24 Score=252.96 Aligned_cols=192 Identities=16% Similarity=0.263 Sum_probs=147.4
Q ss_pred cccccccccccCCceeEEEEEec--CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCe-----e
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ--DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREE-----N 566 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~-----~ 566 (760)
++|++.+.||+|+||.||+|... +++.||||++.... ....+.|.+|+.++++++|||||++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 68999999999999999999975 58999999986542 3445678999999999999999999999987665 6
Q ss_pred EEEEeccCCCChhhhh-----------------------------------------------ccccceeEecCCCcccc
Q 004345 567 MLIYEYMPNKSLDSFL-----------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L-----------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
+|||||+++++|.+++ +|||+++.....
T Consensus 160 ~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~----- 234 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSF----- 234 (681)
T ss_dssp EEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTCC-----
T ss_pred EEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhcccC-----
Confidence 9999999999987652 499999876422
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
....||+.|||||++.... +.++|||||||++|||++|..|+...... ... ....
T Consensus 235 -~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~----------------~~~-------~~~~ 289 (681)
T 2pzi_A 235 -GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD----------------GLP-------EDDP 289 (681)
T ss_dssp -SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS----------------SCC-------TTCH
T ss_pred -CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc----------------ccc-------cccc
Confidence 3457999999999987654 89999999999999999998876421100 000 0000
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCC-HHHHHHHHhccc
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPN-MPTVVSMLNSEI 716 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt-~~ev~~~L~~~~ 716 (760)
.......+.+++.+||+.||++||+ +.++...|.+..
T Consensus 290 ~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 290 VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 0112256778999999999999995 666666666543
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-24 Score=248.32 Aligned_cols=205 Identities=21% Similarity=0.345 Sum_probs=146.6
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEe------CCee
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE------REEN 566 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~------~~~~ 566 (760)
++|++.+.||+|+||.||+|.. .+++.||||++... .....+.|.+|++++++++||||+++++++.. ++..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6799999999999999999996 46889999998754 33446679999999999999999999999765 6678
Q ss_pred EEEEeccCCCChhhhh--------------------------------------------------------ccccceeE
Q 004345 567 MLIYEYMPNKSLDSFL--------------------------------------------------------FDFGLARI 590 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L--------------------------------------------------------~DFGla~~ 590 (760)
++||||+++|+|.+++ +|||+++.
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 9999999999997653 38888876
Q ss_pred ecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCC----
Q 004345 591 FGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN---- 666 (760)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 666 (760)
..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ..|.........
T Consensus 174 ~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~~~~~ 245 (676)
T 3qa8_A 174 LDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNEHIV 245 (676)
T ss_dssp TTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC------CC
T ss_pred ccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccchhhh
Confidence 54322 223457899999999999999999999999999999999999998642111 111100000000
Q ss_pred cccccc------cc--ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHH
Q 004345 667 VIDLVD------PL--ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPT 707 (760)
Q Consensus 667 ~~~~~d------~~--l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~e 707 (760)
..+... .. ............+.+++.+||+.||++|||+.|
T Consensus 246 ~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e 294 (676)
T 3qa8_A 246 VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ 294 (676)
T ss_dssp SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence 000000 00 011123334567889999999999999999977
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-23 Score=227.09 Aligned_cols=210 Identities=19% Similarity=0.253 Sum_probs=148.5
Q ss_pred ccccccccccccCCceeEEEEEec-CC-cEEEEEEecccCccchHhHHHHHHHHhcCCCCc------cceeeeEEEeCCe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DG-QEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN------LVRLLGCCVEREE 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~n------Iv~l~g~~~~~~~ 565 (760)
.++|++.+.||+|+||.||+|... ++ +.||||+++.. ....+.+.+|+.++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 368999999999999999999964 34 68999999643 244567889999999887665 9999999999999
Q ss_pred eEEEEeccCCCChhhh----------------------------------------------------------------
Q 004345 566 NMLIYEYMPNKSLDSF---------------------------------------------------------------- 581 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~---------------------------------------------------------------- 581 (760)
.++||||+. ++|.++
T Consensus 97 ~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 97 MCIAFELLG-KNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEEeccC-CChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccc
Confidence 999999994 444332
Q ss_pred -------hccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccH
Q 004345 582 -------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTL 654 (760)
Q Consensus 582 -------L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~ 654 (760)
|+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 250 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 250 (355)
T ss_dssp ESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred cCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 1278877753221 2235789999999999999999999999999999999999999975433221111
Q ss_pred HHHHH--------HhccCCCcc------------------cccccc-ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHH
Q 004345 655 LGYAW--------KLWNDNNVI------------------DLVDPL-ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPT 707 (760)
Q Consensus 655 ~~~~~--------~~~~~~~~~------------------~~~d~~-l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~e 707 (760)
..... ......... +...+. ............+.+++.+||+.||++|||+.|
T Consensus 251 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e 330 (355)
T 2eu9_A 251 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE 330 (355)
T ss_dssp HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHH
Confidence 11100 000000000 000000 000112234567889999999999999999999
Q ss_pred HHH
Q 004345 708 VVS 710 (760)
Q Consensus 708 v~~ 710 (760)
+++
T Consensus 331 ~l~ 333 (355)
T 2eu9_A 331 ALL 333 (355)
T ss_dssp HTT
T ss_pred Hhc
Confidence 975
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.7e-23 Score=214.57 Aligned_cols=199 Identities=13% Similarity=0.100 Sum_probs=142.6
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.|.+|+.++.+++||||+++++++.+++..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 67999999999999999999975 589999999975432 23468999999999999999999999999999999999
Q ss_pred eccCCCChhhhhc-----------------------ccccee-------EecCCCcccccceeeeeccccCccccccCCC
Q 004345 571 EYMPNKSLDSFLF-----------------------DFGLAR-------IFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620 (760)
Q Consensus 571 Ey~~~gsL~~~L~-----------------------DFGla~-------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 620 (760)
||+++++|.++|. +-|+.. ++-. .......++..|++| +
T Consensus 111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~----~~g~~kl~~~~~~~~-------~ 179 (286)
T 3uqc_A 111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVS----IDGDVVLAYPATMPD-------A 179 (286)
T ss_dssp ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE----TTSCEEECSCCCCTT-------C
T ss_pred EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEc----CCCCEEEEeccccCC-------C
Confidence 9999999998752 122211 1100 011123446677765 7
Q ss_pred CccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccc-cccCCCCHHHHHHHHHHHHhcccCCc
Q 004345 621 SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP-LISESGFKMEIIRCVNVGLLCVQEFV 699 (760)
Q Consensus 621 s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~~~~~l~~~Cl~~~P 699 (760)
+.++|||||||++|||++|+.||............ .... .+. ...+ .+... ....+.+++.+||+.||
T Consensus 180 ~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~~~-~~~---~~~~~~~~~~----~~~~l~~li~~~l~~dP 248 (286)
T 3uqc_A 180 NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---ERDT-AGQ---PIEPADIDRD----IPFQISAVAARSVQGDG 248 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---CBCT-TSC---BCCHHHHCTT----SCHHHHHHHHHHHCTTS
T ss_pred CchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---HHHh-ccC---CCChhhcccC----CCHHHHHHHHHHcccCC
Confidence 89999999999999999999998743322110000 0000 000 0000 00111 12457788999999999
Q ss_pred CCCCCHHHHHHHHhccc
Q 004345 700 KDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 700 ~~RPt~~ev~~~L~~~~ 716 (760)
++| |+.|++++|++..
T Consensus 249 ~~R-s~~el~~~L~~~~ 264 (286)
T 3uqc_A 249 GIR-SASTLLNLMQQAT 264 (286)
T ss_dssp SCC-CHHHHHHHHHHHH
T ss_pred ccC-CHHHHHHHHHHHh
Confidence 999 9999999998864
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.6e-21 Score=204.82 Aligned_cols=195 Identities=13% Similarity=0.111 Sum_probs=127.5
Q ss_pred cccccc-cccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHH-hcCCCCccceeeeEEEe----CCeeE
Q 004345 495 NNFQLA-NKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVI-SNLQHRNLVRLLGCCVE----REENM 567 (760)
Q Consensus 495 ~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l-~~l~H~nIv~l~g~~~~----~~~~~ 567 (760)
++|.+. +.||+|+||.||++.. .+++.||||+++. ...+.+|+.++ +.++||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 567776 7799999999999996 5688999999853 35678899988 66699999999999987 67789
Q ss_pred EEEeccCCCChhhhhccc---------------------------cce-------eEecCCCcccccceeeeeccccCcc
Q 004345 568 LIYEYMPNKSLDSFLFDF---------------------------GLA-------RIFGGNQDQAATKRLVGTYGYMSPE 613 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L~DF---------------------------Gla-------~~~~~~~~~~~~~~~~gt~~y~aPE 613 (760)
+||||+++|+|.+++..- |+. .++-..... ...+--..|-..+
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~---~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP---NAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSST---TCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCC---CCcEEEecccccc
Confidence 999999999998876321 111 000000000 0000001111222
Q ss_pred ccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH----HHHHHHHH
Q 004345 614 YAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK----MEIIRCVN 689 (760)
Q Consensus 614 ~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~----~~~~~~~~ 689 (760)
......++.++|||||||++|||++|+.||........ .......+.... ...+. .....+.+
T Consensus 169 ~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 235 (299)
T 3m2w_A 169 ETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPGMKTRIRMGQ--YEFPNPEWSEVSEEVKM 235 (299)
T ss_dssp ECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCSSCTTC--CSSCHHHHTTSCHHHHH
T ss_pred ccccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----------hHHHHHHHhhcc--ccCCchhcccCCHHHHH
Confidence 33456688999999999999999999999863322110 000000000000 00010 11356778
Q ss_pred HHHhcccCCcCCCCCHHHHHH
Q 004345 690 VGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 690 l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
++.+||+.||++|||+.|+++
T Consensus 236 li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 236 LIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHcccChhhCCCHHHHhc
Confidence 899999999999999999998
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.84 E-value=3e-21 Score=214.09 Aligned_cols=189 Identities=13% Similarity=0.073 Sum_probs=129.4
Q ss_pred hccccccccccccCCceeEEEEE-ecCCcEEEEEEecccC---ccchHhHHHHHHHHhcCCC-Ccccee---------ee
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQH-RNLVRL---------LG 558 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H-~nIv~l---------~g 558 (760)
....|...+.||+|+||.||+|+ ..+++.||||++.... ....+.|.+|+.+++.++| +|...+ ..
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 44568888999999999999999 4578999999987332 2346789999999999987 322111 11
Q ss_pred E------------EEe-----CCeeEEEEeccCCCChhhhh---------------------------------------
Q 004345 559 C------------CVE-----REENMLIYEYMPNKSLDSFL--------------------------------------- 582 (760)
Q Consensus 559 ~------------~~~-----~~~~~lV~Ey~~~gsL~~~L--------------------------------------- 582 (760)
. +.. ....+++|+++ +++|.+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiH 234 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH 234 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 1 111 12346666655 56665432
Q ss_pred ------------------ccccceeEecCCCcccccceeeeeccccCcccc----------ccCCCCccchhHHHHHHHH
Q 004345 583 ------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYA----------MEGRFSEKSDVFSFGVLLL 634 (760)
Q Consensus 583 ------------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~s~ksDVwSfGv~l~ 634 (760)
+|||+++..... ....+| +.|||||++ ....++.++|||||||++|
T Consensus 235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred CCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 499999875322 334567 999999999 5556889999999999999
Q ss_pred HHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHH
Q 004345 635 EIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVV 709 (760)
Q Consensus 635 ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~ 709 (760)
||++|+.||........ ...++... ... ...+.+++.+||+.||++||++.+++
T Consensus 309 elltg~~Pf~~~~~~~~---------------~~~~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGG---------------SEWIFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHSSCCCCTTGGGSC---------------SGGGGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHCCCCCCCcchhhh---------------HHHHHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHH
Confidence 99999999864322111 01111100 011 14577888999999999999976664
|
| >4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.4e-20 Score=162.27 Aligned_cols=104 Identities=19% Similarity=0.333 Sum_probs=88.9
Q ss_pred ccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEEE
Q 004345 25 DTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVL 104 (760)
Q Consensus 25 dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l~ 104 (760)
|+|.+||.|..|++|+| |.|.|.|...+ + |.++.. .++||+|||+.|.. ..+.|+|+.||+|||.
T Consensus 2 n~L~~g~~L~~g~~L~s--g~y~l~~q~Dg-N-----Lvly~~------~~~vW~ant~~~~~-~~~~L~l~~dGnLvL~ 66 (105)
T 4h3o_A 2 NILDNNEGLYAGQSLDV--EPYHFIMQDDC-N-----LVLYDH------STSTWASNTEIGGK-SGCSAVLQSDGNFVVY 66 (105)
T ss_dssp CEECTTEEECTTCEEEE--TTEEEEECTTS-C-----EEEEET------TEEEEECCCCCTTC-CSCEEEECTTSCEEEE
T ss_pred CCcCCCCEEcCCCEEEE--CCEEEEECCCC-e-----EEEEEC------CEEEEEecCCCCCC-ccEEEEEeCCccEEEE
Confidence 78999999999999998 78999998766 3 566532 48999999999965 4578999999999999
Q ss_pred cCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeee
Q 004345 105 NGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDS 149 (760)
Q Consensus 105 d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQS 149 (760)
|+++.+||+|++.... ...+|.|+|+|||||++. +||||
T Consensus 67 d~~~~~vWss~t~~~~--~~~~l~L~ddGNlVly~~----~~W~S 105 (105)
T 4h3o_A 67 DSSGRSLWASHSTRGS--GNYILILQDDGNVIIYGS----DIWST 105 (105)
T ss_dssp CTTCCEEEECCCCCCS--SCEEEEECTTSCEEEEES----EEEEC
T ss_pred CCCcEEEEEecCCCCC--CCEEEEEeCCCeEEEECC----cEecC
Confidence 9999999999986543 456899999999999975 59998
|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 | Back alignment and structure |
|---|
Probab=99.82 E-value=9.4e-20 Score=164.03 Aligned_cols=108 Identities=19% Similarity=0.347 Sum_probs=93.2
Q ss_pred cccccccCCCcccCCCeEE--eCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCc
Q 004345 22 TATDTITSSQFIRDPESII--SSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDG 99 (760)
Q Consensus 22 ~~~dti~~g~~l~~~~~lv--S~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G 99 (760)
++.|+|.+|++|.+|++|+ |++|.|+|+|+.++ + | +||++ +++||+|||+.| +.++.|+|..||
T Consensus 6 ~~~~~l~~g~~L~~g~~l~~~S~~g~~~L~~~~dg-n-----l-vly~~-----~~~vW~sn~~~~--~~~~~l~l~~dG 71 (119)
T 1b2p_A 6 SKQPDDNHPQILHATESLEILFGTHVYRFIMQTDC-N-----L-VLYDN-----NNPIWATNTGGL--GNGCRAVLQPDG 71 (119)
T ss_dssp CSCSSSCCCCEEETTCEEEEEETTEEEEEEECTTS-C-----E-EEEET-----TEEEEECCCTTS--CSSCEEEECTTS
T ss_pred ecCcccCCCCEEcCCCEEEEeCCCCCEEEEEecCC-C-----E-EEEEC-----CEEEEeCCCccC--CCceEEEEccCC
Confidence 4568999999999999999 99999999999876 4 2 57864 589999999977 345799999999
Q ss_pred cEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeee
Q 004345 100 NLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDS 149 (760)
Q Consensus 100 ~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQS 149 (760)
||||.|.++.++|+|++.... +...++|+|+|||||++. ++|||
T Consensus 72 NLVl~d~~~~~lW~S~~~~~~--g~~~l~l~~~Gnlvl~~~----~~W~S 115 (119)
T 1b2p_A 72 VLVVITNENVTVWQSPVAGKA--GHYVLVLQPDRNVVIYGD----ALWAT 115 (119)
T ss_dssp CEEEECTTCCEEEECSCCCCS--SCEEEEECTTSCEEEEES----EEEEC
T ss_pred EEEEEeCCCcEEEcCCCCCCC--CCEEEEEECCCcEEEECc----cEeCC
Confidence 999999999999999976433 356899999999999973 69998
|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=161.00 Aligned_cols=110 Identities=20% Similarity=0.378 Sum_probs=93.8
Q ss_pred cccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEE
Q 004345 24 TDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVV 103 (760)
Q Consensus 24 ~dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l 103 (760)
+|+|.+|+.|..|++|+ ++|.|+|+|+..| + | |+|+. .++||.||++.|. .++.++|..||||||
T Consensus 1 ~d~l~~g~~L~~g~~l~-~~~~~~l~~~~dG-n-----l-vl~~~-----~~~vW~sn~~~~~--~~~~l~l~~dGNLVl 65 (110)
T 3a0c_A 1 VNSLSSPNSLFTGHSLE-VGPSYRLIMQGDC-N-----F-VLYDS-----GKPVWASNTGGLG--SGCRLTLHNNGNLVI 65 (110)
T ss_dssp CCEEETTCEECTTCEEE-ETTTEEEEECTTS-C-----E-EEEET-----TEEEEECCCTTSC--SSCEEEECTTSCEEE
T ss_pred CCEeCCCCEECCCCEEE-ECCCEEEEEcCCC-c-----E-EEEEC-----CEEEEECCCCCCC--CcEEEEEeCCCCEEE
Confidence 48999999999999999 9999999998876 4 2 67763 5899999998773 457899999999999
Q ss_pred EcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCc
Q 004345 104 LNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPT 154 (760)
Q Consensus 104 ~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PT 154 (760)
.|.++.++|+|++.... +...++|+|+|||||++. ++||||+||.
T Consensus 66 ~~~~~~~~W~S~t~~~~--g~~~l~l~~dGnlvl~~~----~~W~S~~~~~ 110 (110)
T 3a0c_A 66 YDQSNRVIWQTKTNGKE--DHYVLVLQQDRNVVIYGP----VVWATGSGPA 110 (110)
T ss_dssp ECTTCCEEEECCCCCSS--SCCEEEECTTSCEEEECS----EEEECSCCC-
T ss_pred ECCCCcEEEecCCCCCC--CCEEEEEeCCccEEEECC----CEecCCCcCC
Confidence 99999999999986443 356899999999999874 6999999983
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-20 Score=202.12 Aligned_cols=192 Identities=15% Similarity=0.141 Sum_probs=132.7
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccC--------ccchHhHHHHHHHHhcCC---------CCcccee
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKAS--------GQGQEEFMNEVMVISNLQ---------HRNLVRL 556 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--------~~~~~~f~~E~~~l~~l~---------H~nIv~l 556 (760)
.++|++.+.||+|+||.||+|+. +++.||||++.... ....+.+.+|+.++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46789999999999999999998 68999999997542 223477899999998885 7777777
Q ss_pred eeEEE-----------------e-------------CCeeEEEEeccCCCChhhh-------------------------
Q 004345 557 LGCCV-----------------E-------------REENMLIYEYMPNKSLDSF------------------------- 581 (760)
Q Consensus 557 ~g~~~-----------------~-------------~~~~~lV~Ey~~~gsL~~~------------------------- 581 (760)
.+++. + .+..+|||||+++|++.+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 66643 2 6789999999999864332
Q ss_pred ---------------------------------------------hccccceeEecCCCcccccceeeeeccccCccccc
Q 004345 582 ---------------------------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM 616 (760)
Q Consensus 582 ---------------------------------------------L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 616 (760)
|+|||+|+.... ...+||+.|||||++.
T Consensus 178 H~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 178 EASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCSGGGC
T ss_pred HHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccChhhhc
Confidence 137787776532 2357999999999998
Q ss_pred cCCCCccchhHHHHHH-HHHHHhCCCCCCCCcccccccHHHHHH-HhccCCCccccccccccCCCCHHHHHHHHHHHHhc
Q 004345 617 EGRFSEKSDVFSFGVL-LLEIVSGRKNTSFYHEEFELTLLGYAW-KLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLC 694 (760)
Q Consensus 617 ~~~~s~ksDVwSfGv~-l~ElltG~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~C 694 (760)
+.. +.++||||++++ .+++++|..|+... ....... ......... ..............+.+++.+|
T Consensus 251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~dli~~~ 319 (336)
T 2vuw_A 251 GDG-DYQFDIYRLMKKENNNRWGEYHPYSNV------LWLHYLTDKMLKQMTFK----TKCNTPAMKQIKRKIQEFHRTM 319 (336)
T ss_dssp CCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH------HHHHHHHHHHHHTCCCS----SCCCSHHHHHHHHHHHHHHHHG
T ss_pred CCC-ccceehhhhhCCCCcccccccCCCcch------hhhhHHHHhhhhhhccC----cccchhhhhhcCHHHHHHHHHH
Confidence 666 899999998777 77888899887310 0000010 000000000 0000111123456788999999
Q ss_pred ccCCcCCCCCHHHHH
Q 004345 695 VQEFVKDRPNMPTVV 709 (760)
Q Consensus 695 l~~~P~~RPt~~ev~ 709 (760)
|+.| |+.|++
T Consensus 320 L~~d-----sa~e~l 329 (336)
T 2vuw_A 320 LNFS-----SATDLL 329 (336)
T ss_dssp GGSS-----SHHHHH
T ss_pred hccC-----CHHHHH
Confidence 9965 999887
|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.9e-19 Score=157.12 Aligned_cols=110 Identities=19% Similarity=0.325 Sum_probs=92.1
Q ss_pred cccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEE
Q 004345 24 TDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVV 103 (760)
Q Consensus 24 ~dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l 103 (760)
.|||.+||.|..+++|+ +|.|+|+|++++ + | ++|+. .++||+|||+.|. .++.|+|..||||||
T Consensus 2 ~dtl~~gq~L~~g~~L~--~g~~~L~~~~dg-n-----l-vly~~-----~~~vW~sn~~~~~--~~~~l~l~~~GnLvl 65 (115)
T 2dpf_A 2 DNVLLSGQTLHADHSLQ--AGAYTLTIQNKC-N-----L-VKYQN-----GRQIWASNTDRRG--SGCRLTLLSDGNLVI 65 (115)
T ss_dssp CCEEETTCEEETTEEEE--ETTEEEEECTTS-C-----E-EEEET-----TEEEEECSCTTSC--SSCEEEECTTSCEEE
T ss_pred CCEeCCCCEECCCCEEE--CCCEEEEEcCCC-c-----E-EEEeC-----CEEEEeCCCCCCC--CceEEEECCCCcEEE
Confidence 48999999999999998 799999998766 3 2 24542 5899999999883 467899999999999
Q ss_pred EcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcc
Q 004345 104 LNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTD 155 (760)
Q Consensus 104 ~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTD 155 (760)
.|.++.++|+|++.... +...++|+|+|||||++. ++||||.++..
T Consensus 66 ~d~~~~~vW~S~~~~~~--g~~~l~l~~dGnlvl~~~----~~W~S~~~~~~ 111 (115)
T 2dpf_A 66 YDHNNNDVWGSACWGDN--GKYALVLQKDGRFVIYGP----VLWSLGPNGCR 111 (115)
T ss_dssp ECTTCCEEEECCCCCSS--SCCEEEECTTSCEEEECS----EEECSSTTCBC
T ss_pred ECCCceEEEEcCCCCCC--CCEEEEEeCCCeEEEECC----CEEECCCCCCc
Confidence 99989999999875433 356899999999999963 69999998764
|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-18 Score=153.02 Aligned_cols=110 Identities=24% Similarity=0.438 Sum_probs=91.8
Q ss_pred cccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEE
Q 004345 24 TDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVV 103 (760)
Q Consensus 24 ~dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l 103 (760)
+|||.+||.|..|++| ++|.|+|+|+.++ + | ++|+. .++||+||++.+ +.++.++|..+|||||
T Consensus 1 tdtl~~gq~L~~g~~L--~~~~~~L~~~~dg-n-----l-vl~~~-----~~~vW~sn~~~~--~~~~~l~l~~~GNLvl 64 (112)
T 1xd5_A 1 SDRLNSGHQLDTGGSL--AEGGYLFIIQNDC-N-----L-VLYDN-----NRAVWASGTNGK--ASGCVLKMQNDGNLVI 64 (112)
T ss_dssp CCEEETTEEECTTCEE--EETTEEEEECTTS-C-----E-EEEET-----TEEEEECCCTTS--CSSEEEEECTTSCEEE
T ss_pred CCCCCCCCEECCCCEE--eCCCEEEEEcCCC-c-----E-EEEEC-----CEEEEeCCCcCC--CCCEEEEEeCCCCEEE
Confidence 4899999999999999 5799999999887 4 2 45653 589999999864 3457899999999999
Q ss_pred EcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCC
Q 004345 104 LNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEP 153 (760)
Q Consensus 104 ~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~P 153 (760)
.| ++.++|+|++.... +...++|+++|||||++. .+.++||||+|.
T Consensus 65 ~d-~~~~~W~S~~~~~~--g~~~l~l~~dGnlvl~~~-~~~~~W~S~~~~ 110 (112)
T 1xd5_A 65 YS-GSRAIWASNTNRQN--GNYYLILQRDRNVVIYDN-SNNAIWATHTNV 110 (112)
T ss_dssp EE-TTEEEEECCCCCSC--CCCEEEECTTSCEEEECT-TSCEEEECCCCC
T ss_pred Ec-CCEEEEECCccCCC--CCEEEEEeCCCcEEEECC-CCceEEECCCcc
Confidence 99 78899999875433 356899999999999985 456899999985
|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4.1e-17 Score=144.67 Aligned_cols=103 Identities=20% Similarity=0.359 Sum_probs=86.1
Q ss_pred ccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEEE
Q 004345 25 DTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVL 104 (760)
Q Consensus 25 dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l~ 104 (760)
+||.+||.|..|++|+ +|.|+|+|+.++ + |. .|.. .++||++|++.+ +.++.|+|..||||||.
T Consensus 2 ntL~~gq~L~~g~~L~--~g~~~L~~q~dG-n-----Lv-ly~~-----~~~vW~snt~~~--~~~~~l~l~~dGNLvl~ 65 (109)
T 3dzw_A 2 NILYSGETLSPGEFLN--NGRYVFIMQEDC-N-----LV-LYDV-----DKPIWATNTGGL--DRRCHLSMQSDGNLVVY 65 (109)
T ss_dssp CEEETTEEECTTCEEE--ETTEEEEECTTS-C-----EE-EEET-----TEEEEECCCTTS--SSSCEEEECTTSCEEEE
T ss_pred CCcCCCCEeCCCCEEE--CCCEEEEEcCCC-c-----EE-EEeC-----CEEEEECCcccC--CCCEEEEEeCCCCEEEE
Confidence 6899999999999996 799999998876 3 22 2543 489999999876 34578999999999999
Q ss_pred cCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeee
Q 004345 105 NGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDS 149 (760)
Q Consensus 105 d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQS 149 (760)
|.++.++|+|++.... ...+|+|+|+|||||++. ++|||
T Consensus 66 ~~~~~~~W~S~t~~~~--~~~~~~L~ddGNlvly~~----~~W~s 104 (109)
T 3dzw_A 66 SPRNNPIWASNTGGEN--GNYVCVLQKDRNVVIYGT----ARWAT 104 (109)
T ss_dssp CTTSCEEEECCCCCSS--SCEEEEECTTSCEEEEES----CCCCC
T ss_pred CCCCCEEEECCCCCCC--CCEEEEEeCCCEEEEECC----CEEeC
Confidence 9999999999975432 346899999999999985 59998
|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
Probab=99.65 E-value=5e-16 Score=137.63 Aligned_cols=105 Identities=18% Similarity=0.286 Sum_probs=84.2
Q ss_pred cccccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccE
Q 004345 22 TATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNL 101 (760)
Q Consensus 22 ~~~dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L 101 (760)
.+.|||.+||.|..|+.|+|. .|.|-|...+ + |.+ |.. ++||.+|++.. +.++.|+|..||||
T Consensus 4 ~~~dtL~~gq~L~~g~~L~sg--~~~L~~q~dG-n-----Lvl-~~~------~~vW~snt~~~--~~~~~l~l~~dGNL 66 (110)
T 3r0e_B 4 FTNNLLFSGQVLYGDGRLTAK--NHQLVMQGDC-N-----LVL-YGG------KYGWQSNTHGN--GEHCFLRLNHKGEL 66 (110)
T ss_dssp CBTTEEETTCEEETTEEEECS--SCEEEECTTS-C-----EEE-ECS------SSCEECCCTTS--SSSCEEEECTTSCE
T ss_pred cccCEECCCCEecCCCEEEeC--CEEEEEcCCC-e-----EEE-ECC------eEEEECCCcCC--CcCEEEEEeCCCcE
Confidence 357999999999999999984 5899665443 3 444 532 48999999863 34578999999999
Q ss_pred EEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeee
Q 004345 102 VVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDS 149 (760)
Q Consensus 102 ~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQS 149 (760)
||.|.++.++|+|++.... +..+|.|+|+|||||++. .+|+|
T Consensus 67 vl~d~~~~~iW~S~t~~~~--~~~~~~L~~dGNlvly~~----~~W~t 108 (110)
T 3r0e_B 67 IIKDDDFKTIWSSRSSSKQ--GEYVLILQDDGFGVIYGP----AIFET 108 (110)
T ss_dssp EEECTTCCEEEECCCCCSS--SCCEEEECTTSCEEEECS----EEEES
T ss_pred EEEeCCCCEEEEcCCcCCC--CCEEEEEcCCccEEEecC----CEecC
Confidence 9999999999999985432 347899999999999973 69997
|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.5e-15 Score=133.85 Aligned_cols=107 Identities=15% Similarity=0.279 Sum_probs=87.3
Q ss_pred ccccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEE
Q 004345 23 ATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLV 102 (760)
Q Consensus 23 ~~dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~ 102 (760)
+.|||.+||.|..++.|.+ |.|.|.|...| + |.++ .. ...++||.+|+..+ +.++.|.|..|||||
T Consensus 5 ~~~tL~~gq~L~~g~~L~~--g~~~L~~q~dG-N-----LvL~-~~---~~~~~vWssnt~~~--~~~~~l~l~~dGNLV 70 (113)
T 3mez_B 5 VRNVLFSSQVMYDNAQLAT--RDYSLVMRDDC-N-----LVLT-KG---SKTNIVWESGTSGR--GQHCFMRLGHSGELD 70 (113)
T ss_dssp CSSEEETTCEEETTCEEEE--TTEEEEECTTS-C-----EEEE-ET---TTTEEEEECCCTTS--CSSCEEEECTTSCEE
T ss_pred cCCEeCCCCEECCCCEeEc--CCEEEEEcCCC-E-----EEEE-EC---CCCEEEEECCcccC--CcCEEEEEeCCCcEE
Confidence 5689999999999999975 88999887665 3 5554 32 23689999999876 345789999999999
Q ss_pred EEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeee
Q 004345 103 VLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDS 149 (760)
Q Consensus 103 l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQS 149 (760)
|.|.++.++|+|++.... +..+|.|+|+|||||++ ..||+|
T Consensus 71 l~d~~~~~iW~S~t~~~~--~~~~~~L~~dGnlvly~----~~~W~s 111 (113)
T 3mez_B 71 ITDDRLNTVFVSNTVGQE--GDYVLILQINGQAVVYG----PAVWST 111 (113)
T ss_dssp EECTTSCEEEECSCCCSS--SCCEEEECTTSCEEEEC----SEEEES
T ss_pred EECCCCCEEEECCCcCCC--CCEEEEEcCCceEEEec----CCEecC
Confidence 999999999999985432 34789999999999997 369997
|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-15 Score=135.51 Aligned_cols=98 Identities=27% Similarity=0.423 Sum_probs=78.1
Q ss_pred CCCCCCCcEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCcc
Q 004345 84 KPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKV 163 (760)
Q Consensus 84 ~pv~~~~~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l 163 (760)
.|+.+...+|.|..||+|+|.+. +++||++|+.... ....|+|+|+|||||+| ++.++||||+
T Consensus 14 ~~L~~~~~~L~~~~dgnlvl~~~-~~~vW~sn~~~~~--~~~~l~l~~~GNLvl~d--~~~~~W~S~~------------ 76 (112)
T 1xd5_A 14 GSLAEGGYLFIIQNDCNLVLYDN-NRAVWASGTNGKA--SGCVLKMQNDGNLVIYS--GSRAIWASNT------------ 76 (112)
T ss_dssp CEEEETTEEEEECTTSCEEEEET-TEEEEECCCTTSC--SSEEEEECTTSCEEEEE--TTEEEEECCC------------
T ss_pred CEEeCCCEEEEEcCCCcEEEEEC-CEEEEeCCCcCCC--CCEEEEEeCCCCEEEEc--CCEEEEECCc------------
Confidence 34445567899999999999987 7899999985422 34689999999999999 4678999993
Q ss_pred cccccCCccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCCCCC
Q 004345 164 STDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNG 219 (760)
Q Consensus 164 ~~~~~~g~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~~~~ 219 (760)
++++|.|++.++++|. ++++.....+||++++|+|
T Consensus 77 -------------------~~~~g~~~l~l~~dGn--lvl~~~~~~~~W~S~~~~g 111 (112)
T 1xd5_A 77 -------------------NRQNGNYYLILQRDRN--VVIYDNSNNAIWATHTNVG 111 (112)
T ss_dssp -------------------CCSCCCCEEEECTTSC--EEEECTTSCEEEECCCCCC
T ss_pred -------------------cCCCCCEEEEEeCCCc--EEEECCCCceEEECCCccC
Confidence 3456889999999987 4444345679999999986
|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=9.3e-15 Score=129.59 Aligned_cols=90 Identities=28% Similarity=0.425 Sum_probs=72.6
Q ss_pred CCCcEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCcccccc
Q 004345 88 DSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDL 167 (760)
Q Consensus 88 ~~~~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~ 167 (760)
+...+|.|..||+|+|.+ .+++||++|+.... ....++|+|+|||||+|. ++.++||||
T Consensus 19 ~~~~~l~~~~dGnlvl~~-~~~~vW~sn~~~~~--~~~~l~l~~dGNLVl~~~-~~~~~W~S~----------------- 77 (110)
T 3a0c_A 19 GPSYRLIMQGDCNFVLYD-SGKPVWASNTGGLG--SGCRLTLHNNGNLVIYDQ-SNRVIWQTK----------------- 77 (110)
T ss_dssp TTTEEEEECTTSCEEEEE-TTEEEEECCCTTSC--SSCEEEECTTSCEEEECT-TCCEEEECC-----------------
T ss_pred CCCEEEEEcCCCcEEEEE-CCEEEEECCCCCCC--CcEEEEEeCCCCEEEECC-CCcEEEecC-----------------
Confidence 345789999999999999 47899999986432 346899999999999997 467899999
Q ss_pred cCCccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCCC
Q 004345 168 RTGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPW 217 (760)
Q Consensus 168 ~~g~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~~ 217 (760)
+++++|.|++.++++|. ++++ ++ +||+++++
T Consensus 78 --------------t~~~~g~~~l~l~~dGn--lvl~-~~--~~W~S~~~ 108 (110)
T 3a0c_A 78 --------------TNGKEDHYVLVLQQDRN--VVIY-GP--VVWATGSG 108 (110)
T ss_dssp --------------CCCSSSCCEEEECTTSC--EEEE-CS--EEEECSCC
T ss_pred --------------CCCCCCCEEEEEeCCcc--EEEE-CC--CEecCCCc
Confidence 24567899999999987 3444 44 79999875
|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
Probab=99.57 E-value=9.8e-15 Score=129.07 Aligned_cols=108 Identities=24% Similarity=0.406 Sum_probs=86.8
Q ss_pred ccccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEE
Q 004345 23 ATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLV 102 (760)
Q Consensus 23 ~~dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~ 102 (760)
+.|||.+||.|..|+.| .+|.|.|.|...+ + |-+ |. . +|.+|+..+ +.++.|+|..||+||
T Consensus 2 ~~dtL~~gq~L~~g~~L--~~g~~~L~~q~dG-N-----Lvl-~~----~----~Wssnt~~~--~~~~~l~l~~dGnLv 62 (109)
T 3r0e_A 2 GTNYLLSGQTLDTEGHL--KNGDFDLVMQDDC-N-----LVL-YN----G----NWQSNTANN--GRDCKLTLTDYGELV 62 (109)
T ss_dssp CCSEEETTCEECTTCEE--EETTEEEEECTTS-C-----EEE-ET----T----TEECCCTTS--CSSCEEEECTTSCEE
T ss_pred ccCCcCCCCCcCCCCEe--ECCCEEEEEecCC-e-----EEE-Ee----C----eEEcCCCCC--CCcEEEEEcCCCeEE
Confidence 56999999999999999 5799999997665 3 222 32 1 699999875 346799999999999
Q ss_pred EEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCC
Q 004345 103 VLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSE 160 (760)
Q Consensus 103 l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg 160 (760)
|.|.++.++|++++.... ...+|+|+|+|||||++. .+|+| .|.+||
T Consensus 63 l~d~~~~~vWss~t~~~~--~~~~~~L~~dGNlvly~~----~~W~s-----~t~~~~ 109 (109)
T 3r0e_A 63 IKNGDGSTVWKSGAQSVK--GNYAAVVHPDGRLVVFGP----SVFKI-----DPWVRG 109 (109)
T ss_dssp EECTTSCEEEECCCCCSS--SCCEEEEETTTEEEEECS----EEEEE-----CTTSCC
T ss_pred EEeCCCCEEEcCCCcCCC--cCEEEEEcCCCeEEEEec----CEECC-----CCccCC
Confidence 999999999999875432 356899999999999973 69996 666654
|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 | Back alignment and structure |
|---|
Probab=99.50 E-value=9.4e-14 Score=124.76 Aligned_cols=86 Identities=27% Similarity=0.454 Sum_probs=70.3
Q ss_pred cEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCcccccccCC
Q 004345 91 GIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTG 170 (760)
Q Consensus 91 ~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~~~g 170 (760)
.+|.|..||+|+|.+. +++||++|+.... ....|+|+|+|||||+|. ++.++||||
T Consensus 32 ~~L~~~~dgnlvly~~-~~~vW~sn~~~~~--~~~~l~l~~dGNLVl~d~-~~~~lW~S~-------------------- 87 (119)
T 1b2p_A 32 YRFIMQTDCNLVLYDN-NNPIWATNTGGLG--NGCRAVLQPDGVLVVITN-ENVTVWQSP-------------------- 87 (119)
T ss_dssp EEEEECTTSCEEEEET-TEEEEECCCTTSC--SSCEEEECTTSCEEEECT-TCCEEEECS--------------------
T ss_pred EEEEEecCCCEEEEEC-CEEEEeCCCccCC--CceEEEEccCCEEEEEeC-CCcEEEcCC--------------------
Confidence 5688999999999987 7899999986432 346899999999999997 467899999
Q ss_pred ccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCC
Q 004345 171 KKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGP 216 (760)
Q Consensus 171 ~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~ 216 (760)
++|++|.|++.++++|. ++++ . .+||++|+
T Consensus 88 -----------~~~~~g~~~l~l~~~Gn--lvl~-~--~~~W~Sg~ 117 (119)
T 1b2p_A 88 -----------VAGKAGHYVLVLQPDRN--VVIY-G--DALWATQT 117 (119)
T ss_dssp -----------CCCCSSCEEEEECTTSC--EEEE-E--SEEEECCC
T ss_pred -----------CCCCCCCEEEEEECCCc--EEEE-C--ccEeCCCC
Confidence 34567899999999987 4444 3 38999986
|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-13 Score=123.42 Aligned_cols=92 Identities=28% Similarity=0.416 Sum_probs=73.9
Q ss_pred CCcEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCccccccc
Q 004345 89 SSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLR 168 (760)
Q Consensus 89 ~~~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~~ 168 (760)
....|.+..||+|+|.+ .+++||++|+.... ....++|+|+|||||+|. ++.++||||++
T Consensus 20 g~~~L~~~~dgnlvly~-~~~~vW~sn~~~~~--~~~~l~l~~~GnLvl~d~-~~~~vW~S~~~---------------- 79 (115)
T 2dpf_A 20 GAYTLTIQNKCNLVKYQ-NGRQIWASNTDRRG--SGCRLTLLSDGNLVIYDH-NNNDVWGSACW---------------- 79 (115)
T ss_dssp TTEEEEECTTSCEEEEE-TTEEEEECSCTTSC--SSCEEEECTTSCEEEECT-TCCEEEECCCC----------------
T ss_pred CCEEEEEcCCCcEEEEe-CCEEEEeCCCCCCC--CceEEEECCCCcEEEECC-CceEEEEcCCC----------------
Confidence 34679999999999998 47899999986432 346899999999999997 46789999998
Q ss_pred CCccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCCCCCc
Q 004345 169 TGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWNGR 220 (760)
Q Consensus 169 ~g~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~~~~~ 220 (760)
+++|.|++.++++|. ++++ +. .||++++|...
T Consensus 80 ---------------~~~g~~~l~l~~dGn--lvl~-~~--~~W~S~~~~~~ 111 (115)
T 2dpf_A 80 ---------------GDNGKYALVLQKDGR--FVIY-GP--VLWSLGPNGCR 111 (115)
T ss_dssp ---------------CSSSCCEEEECTTSC--EEEE-CS--EEECSSTTCBC
T ss_pred ---------------CCCCCEEEEEeCCCe--EEEE-CC--CEEECCCCCCc
Confidence 245788999999987 4444 43 79999999653
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=4.9e-15 Score=170.30 Aligned_cols=139 Identities=17% Similarity=0.113 Sum_probs=88.8
Q ss_pred cccccCCceeEEEEE-ecCCcEEEEEEecccC----------ccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEE
Q 004345 501 NKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS----------GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~----------~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~l 568 (760)
...+.|++|.+..++ .-.|+.+|||.+.+.. ....++|.+|+++|+++ +|+||+++++++++++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 346677777666654 3458899999996431 22345799999999999 79999999999999999999
Q ss_pred EEeccCCCChhhhh-----------------------------------------------ccccceeEecCCCcccccc
Q 004345 569 IYEYMPNKSLDSFL-----------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 569 V~Ey~~~gsL~~~L-----------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
||||++|++|.++| +|||+|+...... ....
T Consensus 320 VMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~--~~~~ 397 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC--SWPT 397 (569)
T ss_dssp EEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-----CCSH
T ss_pred EEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC--cccc
Confidence 99999999999874 4999999764332 2234
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCC
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKN 642 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p 642 (760)
..+||+.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 398 t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 398 NLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp HHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 5789999999999864 567789999999999888776544
|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=2.2e-13 Score=120.80 Aligned_cols=105 Identities=14% Similarity=0.221 Sum_probs=82.4
Q ss_pred cccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEE
Q 004345 24 TDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVV 103 (760)
Q Consensus 24 ~dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l 103 (760)
.|+|.+||.|..|+.| .+|.|.|.|...+ + |.+ |.. .. ||.+|+..+ +..+.|.|..||||||
T Consensus 2 ~~~l~~gq~L~~g~~L--~~g~~~L~~q~dG-n-----Lvl-~~~-----~~-vW~snt~~~--~~~~~l~l~~dGNLVl 64 (111)
T 3mez_A 2 NNVLLTGDVIHTDNQL--SYESAAFVMQGDC-N-----LVL-YNE-----AG-GFQSNTHGR--GVDCTLRLNNRGQLEI 64 (111)
T ss_dssp TTEEETTCEECTTCEE--EETTEEEEECTTS-C-----EEE-ECS-----SC-CEECCCTTS--CSSCEEEECTTSCEEE
T ss_pred cCEeCCCCEeCCCCEE--ecCCEEEEEccCC-e-----EEE-ECC-----CC-EEECCcccC--CcCEEEEEcCCCcEEE
Confidence 4799999999999999 4788999997665 3 333 543 23 999999876 3457899999999999
Q ss_pred EcCCCC-EEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeee
Q 004345 104 LNGKKQ-VHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDS 149 (760)
Q Consensus 104 ~d~~~~-~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQS 149 (760)
.|.++. ++|+|++......+..++.|+|+|||||++ ..+|+|
T Consensus 65 ~~~~~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~----~~~W~s 107 (111)
T 3mez_A 65 HSANSNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG----PAIWST 107 (111)
T ss_dssp ECSSCSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC----SEEEEC
T ss_pred EeCCCCEEEEEeccccCCCCcCEEEEECCCCeEEEec----cCEEcc
Confidence 998876 599999632222245689999999999997 369997
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.4e-14 Score=163.61 Aligned_cols=145 Identities=15% Similarity=0.162 Sum_probs=107.7
Q ss_pred ccccccccCCceeEEEEEecCCcEEEEEEecccCc--------cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 498 QLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASG--------QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 498 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
...+.||+|+||.||+|.. .++.+++|+...... ...++|.+|++++++++||||+++..++...+..+||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3357899999999999954 468889998653211 1134589999999999999999777777788888999
Q ss_pred EeccCCCChhhhh----------------------------------------ccccceeEecCCCccc-----ccceee
Q 004345 570 YEYMPNKSLDSFL----------------------------------------FDFGLARIFGGNQDQA-----ATKRLV 604 (760)
Q Consensus 570 ~Ey~~~gsL~~~L----------------------------------------~DFGla~~~~~~~~~~-----~~~~~~ 604 (760)
|||+++++|.++| +|||+++......... ......
T Consensus 418 mE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~ 497 (540)
T 3en9_A 418 MSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDEDKAVDLIVFKKAVL 497 (540)
T ss_dssp EECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESSSEEECCCTTCEECCCHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECCeEEEEECccCEECCCccccccchhhhhhhhc
Confidence 9999999998752 4999999875432211 123568
Q ss_pred eeccccCcccccc--CCCCccchhHHHHHHHHHHHhCCCCC
Q 004345 605 GTYGYMSPEYAME--GRFSEKSDVFSFGVLLLEIVSGRKNT 643 (760)
Q Consensus 605 gt~~y~aPE~~~~--~~~s~ksDVwSfGv~l~ElltG~~p~ 643 (760)
||+.|||||++.. ..|+.++|+||..+-.+|.+.++.++
T Consensus 498 GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 498 STHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 9999999999986 56888899999999999988877665
|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=3.6e-11 Score=124.28 Aligned_cols=114 Identities=19% Similarity=0.291 Sum_probs=87.6
Q ss_pred cccccccCCCc----ccCCCeEEeCCCeEEEeecCCCC-CCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEe
Q 004345 22 TATDTITSSQF----IRDPESIISSGSKFKLGFFSPDG-NFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTIS 96 (760)
Q Consensus 22 ~~~dti~~g~~----l~~~~~lvS~~g~F~lGFf~~~~-~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~ 96 (760)
..+||+.||++ |..|+.|+| ...++.|+|...- ...+.+ + |.+ ..+++|.+++..+- . ..|.+.
T Consensus 134 ~ptdtlLpg~~~~~~l~~g~~L~S-~~dps~G~fsl~l~~dGnlv--L-y~~----~~~~yW~Sgt~~~~--~-~~l~l~ 202 (276)
T 3m7h_A 134 TPAIPLVPGAIDSLLLAPGSELVQ-GVVYGAGASKLVFQGDGNLV--A-YGP----NGAATWNAGTQGKG--A-VRAVFQ 202 (276)
T ss_dssp CTTSCCCCSCTTCEEECSSEEECT-TCEEEETTEEEEECTTSCEE--E-ECT----TSSEEEECCCTTTT--C-CEEEEC
T ss_pred ccccccccccccccccccCccccc-CCCCCCceEEEeecCCceEE--E-EeC----CCeEEEECCCCCCc--c-EEEEEc
Confidence 46799999999 888888855 4677777766320 112333 3 332 25899999998872 3 789999
Q ss_pred cCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCC
Q 004345 97 EDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQE 152 (760)
Q Consensus 97 ~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~ 152 (760)
.+|+|++.|.++.++|++++... ...+|.|+++|||||++. .++||||||
T Consensus 203 ~dGnLvl~d~~~~~vWsS~t~~~---~~~rl~Ld~dGnLvly~~---~~~Wqsf~~ 252 (276)
T 3m7h_A 203 GDGNLVVYGAGNAVLWHSHTGGH---ASAVLRLQANGSIAILDE---KPVWARFGF 252 (276)
T ss_dssp TTSCEEEECTTSCEEEECSCTTC---TTCEEEECTTSCEEEEEE---EEEEESSSC
T ss_pred CCCeEEEEeCCCcEEEEecCCCC---CCEEEEEcCCccEEEEcC---CCeEEccCc
Confidence 99999999998899999997532 247899999999999975 479999997
|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.1e-10 Score=103.82 Aligned_cols=96 Identities=22% Similarity=0.314 Sum_probs=72.6
Q ss_pred CCCCCCCCCcEEEEecCccEEEEcC-CCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCC
Q 004345 82 RNKPLIDSSGIFTISEDGNLVVLNG-KKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSE 160 (760)
Q Consensus 82 r~~pv~~~~~~l~l~~~G~L~l~d~-~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg 160 (760)
.+.|+.+....|.+..||+|||.+. .+.++|++++.... ....+.|+|+|||||+|. ++.++|||=.+
T Consensus 17 ~g~~L~~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~--~~~~l~l~~dGNLVl~d~-~~~~iW~S~t~-------- 85 (113)
T 3mez_B 17 DNAQLATRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRG--QHCFMRLGHSGELDITDD-RLNTVFVSNTV-------- 85 (113)
T ss_dssp TTCEEEETTEEEEECTTSCEEEEETTTTEEEEECCCTTSC--SSCEEEECTTSCEEEECT-TSCEEEECSCC--------
T ss_pred CCCEeEcCCEEEEEcCCCEEEEEECCCCEEEEECCcccCC--cCEEEEEeCCCcEEEECC-CCCEEEECCCc--------
Confidence 4556666668999999999999998 48899999986432 346899999999999997 45689997211
Q ss_pred CcccccccCCccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCC
Q 004345 161 MKVSTDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGP 216 (760)
Q Consensus 161 ~~l~~~~~~g~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~ 216 (760)
...|.|.+.++.+|...++ . .+.|.+++
T Consensus 86 -----------------------~~~~~~~~~L~~dGnlvly---~--~~~W~s~~ 113 (113)
T 3mez_B 86 -----------------------GQEGDYVLILQINGQAVVY---G--PAVWSTAA 113 (113)
T ss_dssp -----------------------CSSSCCEEEECTTSCEEEE---C--SEEEESCC
T ss_pred -----------------------CCCCCEEEEEcCCceEEEe---c--CCEecCCC
Confidence 0124588889999976654 3 57898874
|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=8.5e-11 Score=104.07 Aligned_cols=96 Identities=22% Similarity=0.357 Sum_probs=71.5
Q ss_pred CCCCCCCCcEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCc
Q 004345 83 NKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMK 162 (760)
Q Consensus 83 ~~pv~~~~~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~ 162 (760)
+.++......|.+..||||||.+.++ +|++++.... ....++|+|+|||||++..++.++|||.-+
T Consensus 14 g~~L~~g~~~L~~q~dGnLvl~~~~~--vW~snt~~~~--~~~~l~l~~dGNLVl~~~~~~~~vW~S~t~---------- 79 (111)
T 3mez_A 14 DNQLSYESAAFVMQGDCNLVLYNEAG--GFQSNTHGRG--VDCTLRLNNRGQLEIHSANSNTPVWVYPRS---------- 79 (111)
T ss_dssp TCEEEETTEEEEECTTSCEEEECSSC--CEECCCTTSC--SSCEEEECTTSCEEEECSSCSSCSEEESSS----------
T ss_pred CCEEecCCEEEEEccCCeEEEECCCC--EEECCcccCC--cCEEEEEcCCCcEEEEeCCCCEEEEEeccc----------
Confidence 33444455789999999999999877 9999986432 246899999999999997544469998621
Q ss_pred ccccccCCccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCC
Q 004345 163 VSTDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGP 216 (760)
Q Consensus 163 l~~~~~~g~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~ 216 (760)
.....|.|.+.++.+|...++ . .++|.+++
T Consensus 80 -------------------~~~~~~~~~l~Lq~dGNlvly---~--~~~W~s~t 109 (111)
T 3mez_A 80 -------------------VNTVRGNYAATLGPDQHVTIY---G--PAIWSTPA 109 (111)
T ss_dssp -------------------CCCCSSCCEEEECTTSCEEEE---C--SEEEECCC
T ss_pred -------------------cCCCCcCEEEEECCCCeEEEe---c--cCEEccCC
Confidence 011347889999999986654 3 67999875
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=8.9e-11 Score=122.62 Aligned_cols=90 Identities=18% Similarity=0.169 Sum_probs=70.4
Q ss_pred HHHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCc------------------cchHhHHHHHHHHhcC
Q 004345 487 FEELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASG------------------QGQEEFMNEVMVISNL 548 (760)
Q Consensus 487 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~------------------~~~~~f~~E~~~l~~l 548 (760)
+..+......|++.+.||+|+||.||+|...+++.||||.++.... .....+.+|+.+++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 4445555666788899999999999999997799999999964321 1245689999999999
Q ss_pred CCCccceeeeEEEeCCeeEEEEeccCCCChhh
Q 004345 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDS 580 (760)
Q Consensus 549 ~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~ 580 (760)
+ | +++.+++. .+..++||||+++++|.+
T Consensus 162 ~--~-~~v~~~~~-~~~~~lvmE~~~g~~L~~ 189 (282)
T 1zar_A 162 Q--G-LAVPKVYA-WEGNAVLMELIDAKELYR 189 (282)
T ss_dssp T--T-SSSCCEEE-EETTEEEEECCCCEEGGG
T ss_pred c--C-CCcCeEEe-ccceEEEEEecCCCcHHH
Confidence 9 4 66666554 356699999999999977
|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=2.6e-09 Score=94.24 Aligned_cols=88 Identities=23% Similarity=0.418 Sum_probs=66.3
Q ss_pred CCcEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCccccccc
Q 004345 89 SSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLR 168 (760)
Q Consensus 89 ~~~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~~ 168 (760)
....|.+..||+|+|.+. +.++|++++.... ....+.|+|+|||||+|. ++.++|||....
T Consensus 19 g~~~L~~q~dGnLvly~~-~~~vW~snt~~~~--~~~~l~l~~dGNLvl~~~-~~~~~W~S~t~~--------------- 79 (109)
T 3dzw_A 19 GRYVFIMQEDCNLVLYDV-DKPIWATNTGGLD--RRCHLSMQSDGNLVVYSP-RNNPIWASNTGG--------------- 79 (109)
T ss_dssp TTEEEEECTTSCEEEEET-TEEEEECCCTTSS--SSCEEEECTTSCEEEECT-TSCEEEECCCCC---------------
T ss_pred CCEEEEEcCCCcEEEEeC-CEEEEECCcccCC--CCEEEEEeCCCCEEEECC-CCCEEEECCCCC---------------
Confidence 346899999999999988 6899999986432 346899999999999997 456899984211
Q ss_pred CCccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCC
Q 004345 169 TGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGP 216 (760)
Q Consensus 169 ~g~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~ 216 (760)
..+.|.+.++.+|...++ . .+.|.+++
T Consensus 80 ----------------~~~~~~~~L~ddGNlvly---~--~~~W~s~t 106 (109)
T 3dzw_A 80 ----------------ENGNYVCVLQKDRNVVIY---G--TARWATGT 106 (109)
T ss_dssp ----------------SSSCEEEEECTTSCEEEE---E--SCCCCCCC
T ss_pred ----------------CCCCEEEEEeCCCEEEEE---C--CCEEeCCC
Confidence 124678889998876654 2 26788775
|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
Probab=98.97 E-value=2e-09 Score=94.99 Aligned_cols=88 Identities=19% Similarity=0.365 Sum_probs=65.5
Q ss_pred CCCcEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCcccccc
Q 004345 88 DSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDL 167 (760)
Q Consensus 88 ~~~~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~ 167 (760)
.....|.+..||+|+|.+. .++|++++.... ....++|+|+|||||+|. ++.++|||-.+-
T Consensus 23 sg~~~L~~q~dGnLvl~~~--~~vW~snt~~~~--~~~~l~l~~dGNLvl~d~-~~~~iW~S~t~~-------------- 83 (110)
T 3r0e_B 23 AKNHQLVMQGDCNLVLYGG--KYGWQSNTHGNG--EHCFLRLNHKGELIIKDD-DFKTIWSSRSSS-------------- 83 (110)
T ss_dssp CSSCEEEECTTSCEEEECS--SSCEECCCTTSS--SSCEEEECTTSCEEEECT-TCCEEEECCCCC--------------
T ss_pred eCCEEEEEcCCCeEEEECC--eEEEECCCcCCC--cCEEEEEeCCCcEEEEeC-CCCEEEEcCCcC--------------
Confidence 3457899999999999987 589999986422 246899999999999997 466899984210
Q ss_pred cCCccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCC
Q 004345 168 RTGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGP 216 (760)
Q Consensus 168 ~~g~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~ 216 (760)
..|.|.+.++.+|...++ . .+.|.+|+
T Consensus 84 -----------------~~~~~~~~L~~dGNlvly---~--~~~W~t~~ 110 (110)
T 3r0e_B 84 -----------------KQGEYVLILQDDGFGVIY---G--PAIFETSS 110 (110)
T ss_dssp -----------------SSSCCEEEECTTSCEEEE---C--SEEEESCC
T ss_pred -----------------CCCCEEEEEcCCccEEEe---c--CCEecCCC
Confidence 124578889998876654 3 37888763
|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
Probab=98.87 E-value=6.6e-09 Score=91.50 Aligned_cols=93 Identities=25% Similarity=0.469 Sum_probs=69.0
Q ss_pred CCCCCCCCCcEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCC
Q 004345 82 RNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEM 161 (760)
Q Consensus 82 r~~pv~~~~~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~ 161 (760)
.+.|+.+....|.+..||||||.++ +|+|++.... ....++|+++|||||+|. ++.++|+|- |
T Consensus 14 ~g~~L~~g~~~L~~q~dGNLvl~~~----~Wssnt~~~~--~~~~l~l~~dGnLvl~d~-~~~~vWss~-----t----- 76 (109)
T 3r0e_A 14 TEGHLKNGDFDLVMQDDCNLVLYNG----NWQSNTANNG--RDCKLTLTDYGELVIKNG-DGSTVWKSG-----A----- 76 (109)
T ss_dssp TTCEEEETTEEEEECTTSCEEEETT----TEECCCTTSC--SSCEEEECTTSCEEEECT-TSCEEEECC-----C-----
T ss_pred CCCEeECCCEEEEEecCCeEEEEeC----eEEcCCCCCC--CcEEEEEcCCCeEEEEeC-CCCEEEcCC-----C-----
Confidence 3445555567899999999999985 7999986432 346899999999999987 456899752 2
Q ss_pred cccccccCCccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCCC
Q 004345 162 KVSTDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPW 217 (760)
Q Consensus 162 ~l~~~~~~g~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~~ 217 (760)
....+.|.+.++.+|...++ . .+.|++++|
T Consensus 77 ---------------------~~~~~~~~~~L~~dGNlvly---~--~~~W~s~t~ 106 (109)
T 3r0e_A 77 ---------------------QSVKGNYAAVVHPDGRLVVF---G--PSVFKIDPW 106 (109)
T ss_dssp ---------------------CCSSSCCEEEEETTTEEEEE---C--SEEEEECTT
T ss_pred ---------------------cCCCcCEEEEEcCCCeEEEE---e--cCEECCCCc
Confidence 00235678899999876554 3 578999987
|
| >4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* | Back alignment and structure |
|---|
Probab=98.62 E-value=2.3e-07 Score=80.95 Aligned_cols=78 Identities=27% Similarity=0.388 Sum_probs=59.1
Q ss_pred cEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCcccccccCC
Q 004345 91 GIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTG 170 (760)
Q Consensus 91 ~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~~~g 170 (760)
-+|.+..||||||.+. +.+||++|+.... .....++|.++|||||+|. ++.++|.|- |
T Consensus 21 y~l~~q~DgNLvly~~-~~~vW~ant~~~~-~~~~~L~l~~dGnLvL~d~-~~~~vWss~-----t-------------- 78 (105)
T 4h3o_A 21 YHFIMQDDCNLVLYDH-STSTWASNTEIGG-KSGCSAVLQSDGNFVVYDS-SGRSLWASH-----S-------------- 78 (105)
T ss_dssp EEEEECTTSCEEEEET-TEEEEECCCCCTT-CCSCEEEECTTSCEEEECT-TCCEEEECC-----C--------------
T ss_pred EEEEECCCCeEEEEEC-CEEEEEecCCCCC-CccEEEEEeCCccEEEECC-CcEEEEEec-----C--------------
Confidence 5789999999999985 5789999986432 2356899999999999998 467899861 1
Q ss_pred ccEEEEeecCCCCCCCcceEEeecCCCcceEE
Q 004345 171 KKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVF 202 (760)
Q Consensus 171 ~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~ 202 (760)
....+.|.+.++.+|...++
T Consensus 79 ------------~~~~~~~~l~L~ddGNlVly 98 (105)
T 4h3o_A 79 ------------TRGSGNYILILQDDGNVIIY 98 (105)
T ss_dssp ------------CCCSSCEEEEECTTSCEEEE
T ss_pred ------------CCCCCCEEEEEeCCCeEEEE
Confidence 11235678889888876553
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 | Back alignment and structure |
|---|
Probab=98.57 E-value=2e-07 Score=94.31 Aligned_cols=88 Identities=30% Similarity=0.439 Sum_probs=67.0
Q ss_pred CcEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCcccccccC
Q 004345 90 SGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRT 169 (760)
Q Consensus 90 ~~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~~~ 169 (760)
.-.|.+..||+|+|.++ +++||.+|+... ....++|+++|||||+|. ++.+||+|+.+.
T Consensus 27 ~f~l~f~~~gnl~ly~~-~~~vW~an~~~~---~~~~l~l~~dGnLvl~d~-~~~~vW~s~~~~---------------- 85 (236)
T 1dlp_A 27 SFRFTMQSDCNLVLFDS-DVRVWASNTAGA---TGCRAVLQSDGLLVILTA-QNTIRWSSGTKG---------------- 85 (236)
T ss_dssp TEEEEECTTSCEEEEES-SSEEECCCCCSC---SCCBCCBCSSSCBCCBCT-TTCCSCCCCCCC----------------
T ss_pred CEEEEECCCCcEEEEEC-CEEEEECCCCCC---CCeEEEEcCCCcEEEEcC-CCcEEEeCCccc----------------
Confidence 35688888999999986 789999997643 356799999999999997 467899998641
Q ss_pred CccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCCCC
Q 004345 170 GKKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPWN 218 (760)
Q Consensus 170 g~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~~~ 218 (760)
..|.|.+.++.+|...++ . . .||.+..+.
T Consensus 86 ---------------~~~~~~~~l~d~Gnlvl~---~-~-~~W~S~~~p 114 (236)
T 1dlp_A 86 ---------------SIGNYVLVLQPDRTVTIY---G-P-GLWDSGTSN 114 (236)
T ss_dssp ---------------CSSCCEEEECSSSCEEEE---C-S-EEEECSCCC
T ss_pred ---------------cCCcEEEEEeCCCCEEEe---c-C-CEEECCCCC
Confidence 235567888888875553 2 2 789988664
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=7.3e-06 Score=83.96 Aligned_cols=77 Identities=14% Similarity=0.121 Sum_probs=57.3
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcE--EEEEEecccCcc------------------------chHhHHHHHHHHh
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQE--IAVKRLSKASGQ------------------------GQEEFMNEVMVIS 546 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~l~~~~~~------------------------~~~~f~~E~~~l~ 546 (760)
..-|++.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|+.+|.
T Consensus 46 ~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 125 (258)
T 1zth_A 46 GYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLE 125 (258)
T ss_dssp TSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHH
T ss_pred CCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHH
Confidence 33467889999999999999997 68888 999987543111 0136889999999
Q ss_pred cCCCCcc--ceeeeEEEeCCeeEEEEeccC
Q 004345 547 NLQHRNL--VRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 547 ~l~H~nI--v~l~g~~~~~~~~~lV~Ey~~ 574 (760)
+++|+++ .++++. ...+|||||+.
T Consensus 126 ~l~~~~i~~p~~~~~----~~~~lVmE~~g 151 (258)
T 1zth_A 126 RAKEAGVSVPQPYTY----MKNVLLMEFIG 151 (258)
T ss_dssp HHHHTTCCCCCEEEE----ETTEEEEECCE
T ss_pred HHHhCCCCCCeEEEc----CCCEEEEEecC
Confidence 9988754 444432 35689999994
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=97.86 E-value=5.3e-06 Score=89.35 Aligned_cols=91 Identities=9% Similarity=0.128 Sum_probs=56.7
Q ss_pred HHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCc--------------cchHhHH--------HHHHHHh
Q 004345 489 ELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASG--------------QGQEEFM--------NEVMVIS 546 (760)
Q Consensus 489 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~--------------~~~~~f~--------~E~~~l~ 546 (760)
.+...-.-|++.+.||+|++|.||+|..++|+.||||+++.... ......+ +|...|.
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 34333344999999999999999999999999999998753210 0111222 3444555
Q ss_pred cCCCCccceeeeEEEeCCeeEEEEeccCCCChhhh
Q 004345 547 NLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF 581 (760)
Q Consensus 547 ~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~ 581 (760)
++.+.++.-..-+.. ...+|||||+++++|..+
T Consensus 169 rL~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l 201 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQV 201 (397)
T ss_dssp HHHHTTCSCCCEEEE--ETTEEEEECCSCEEGGGC
T ss_pred HHHhcCCCCCeeeec--cCceEEEEecCCccHhhh
Confidence 553333211111111 223799999999888664
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00051 Score=69.91 Aligned_cols=90 Identities=9% Similarity=-0.030 Sum_probs=73.1
Q ss_pred HHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEEE
Q 004345 491 ANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 491 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV 569 (760)
......|++...++.|+.+.||+.... ++.+++|+...........+.+|+.+++.+. |..+.++++++...+..++|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 344467888888999999999999854 6889999986532234457899999999884 67888999999998999999
Q ss_pred EeccCCCChhhh
Q 004345 570 YEYMPNKSLDSF 581 (760)
Q Consensus 570 ~Ey~~~gsL~~~ 581 (760)
|||++|.+|.+.
T Consensus 89 ~e~i~G~~l~~~ 100 (263)
T 3tm0_A 89 MSEADGVLCSEE 100 (263)
T ss_dssp EECCSSEEHHHH
T ss_pred EEecCCeehhhc
Confidence 999999888764
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.63 E-value=0.002 Score=65.10 Aligned_cols=82 Identities=17% Similarity=0.153 Sum_probs=62.1
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCc--cceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRN--LVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~n--Iv~l~g~~~~~~~~~lV~Ey 572 (760)
.++.+....+.|..+.||+....+++.+++|..... ....+.+|+.+++.+.+.+ +.+++++...++..++||||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 345543333456669999998777888999987543 3356889999999886544 56689988888889999999
Q ss_pred cCCCChh
Q 004345 573 MPNKSLD 579 (760)
Q Consensus 573 ~~~gsL~ 579 (760)
+++.+|.
T Consensus 97 i~G~~l~ 103 (264)
T 1nd4_A 97 VPGQDLL 103 (264)
T ss_dssp CSSEETT
T ss_pred cCCcccC
Confidence 9998874
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=93.58 E-value=0.066 Score=56.89 Aligned_cols=79 Identities=15% Similarity=0.260 Sum_probs=57.8
Q ss_pred ccccccCCceeEEEEEecCCcEEEEEEec--ccC-ccchHhHHHHHHHHhcCC--CCccceeeeEEEeC---CeeEEEEe
Q 004345 500 ANKLGQGGFGPVYKGKLQDGQEIAVKRLS--KAS-GQGQEEFMNEVMVISNLQ--HRNLVRLLGCCVER---EENMLIYE 571 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~--~~~-~~~~~~f~~E~~~l~~l~--H~nIv~l~g~~~~~---~~~~lV~E 571 (760)
.+.|+.|.++.||+....+ ..+++|+.. ... ......+.+|+.+++.+. +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 5789999999999998764 678888765 321 123457889999999886 45688999998776 45899999
Q ss_pred ccCCCChh
Q 004345 572 YMPNKSLD 579 (760)
Q Consensus 572 y~~~gsL~ 579 (760)
|+++..+.
T Consensus 122 ~v~G~~l~ 129 (359)
T 3dxp_A 122 FVSGRVLW 129 (359)
T ss_dssp CCCCBCCC
T ss_pred ecCCeecC
Confidence 99998774
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=92.69 E-value=0.19 Score=51.54 Aligned_cols=79 Identities=18% Similarity=0.233 Sum_probs=58.1
Q ss_pred cccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCC---CccceeeeEEEeCCeeEEEEecc
Q 004345 497 FQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH---RNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 497 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H---~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
..-.+.+|.|..+.||+.++.+|+.+.||+...........|..|+..|+.|.- --+.+++++. ..++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence 344578999999999999999999999998765444445568899998887742 2345555542 347899999
Q ss_pred CCCChh
Q 004345 574 PNKSLD 579 (760)
Q Consensus 574 ~~gsL~ 579 (760)
+.+...
T Consensus 93 ~~~~~~ 98 (288)
T 3f7w_A 93 DERPPT 98 (288)
T ss_dssp CCCCCC
T ss_pred cccCCC
Confidence 877643
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=90.17 E-value=0.63 Score=48.34 Aligned_cols=75 Identities=17% Similarity=0.154 Sum_probs=60.4
Q ss_pred ccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCC---CCccceeeeEEEeCCeeEEEEeccCCC
Q 004345 500 ANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ---HRNLVRLLGCCVEREENMLIYEYMPNK 576 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~---H~nIv~l~g~~~~~~~~~lV~Ey~~~g 576 (760)
.+.|+.|....+|+.... +..+++|+.... ....|..|...|+.|. ...+.++++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 467899999999998864 677888886532 3567889999888773 367889999988888899999999988
Q ss_pred Ch
Q 004345 577 SL 578 (760)
Q Consensus 577 sL 578 (760)
.+
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 75
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=89.61 E-value=0.41 Score=51.48 Aligned_cols=75 Identities=12% Similarity=0.154 Sum_probs=50.8
Q ss_pred ccccccCCceeEEEEEec-CCcEEEEEEecccCc-------cchHhHHHHHHHHhcCCC--Cc-cceeeeEEEeCCeeEE
Q 004345 500 ANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASG-------QGQEEFMNEVMVISNLQH--RN-LVRLLGCCVEREENML 568 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~f~~E~~~l~~l~H--~n-Iv~l~g~~~~~~~~~l 568 (760)
.+.||.|..+.||++... +++.++||....... ...+.+..|.++++.+.+ +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 468999999999999754 467899997643211 234567889999887742 33 4456544 4556789
Q ss_pred EEeccCCC
Q 004345 569 IYEYMPNK 576 (760)
Q Consensus 569 V~Ey~~~g 576 (760)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=85.14 E-value=0.14 Score=56.66 Aligned_cols=61 Identities=8% Similarity=0.109 Sum_probs=18.8
Q ss_pred cccccccCCceeEEEEEecC-CcEEEE------EEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEe
Q 004345 499 LANKLGQGGFGPVYKGKLQD-GQEIAV------KRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE 562 (760)
Q Consensus 499 ~~~~lG~G~~g~Vy~~~~~~-~~~vav------K~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~ 562 (760)
+.++|| ||.||+|.+.. ..+||| |..+.. ..+....|.+|..++..++|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 346777 99999999754 367888 766532 23344579999999999999999999988654
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=83.31 E-value=0.74 Score=48.50 Aligned_cols=81 Identities=9% Similarity=-0.013 Sum_probs=57.8
Q ss_pred cccc-ccCCceeEEEEEec-------CCcEEEEEEecccC---ccchHhHHHHHHHHhcCC-C--CccceeeeEEEeC--
Q 004345 500 ANKL-GQGGFGPVYKGKLQ-------DGQEIAVKRLSKAS---GQGQEEFMNEVMVISNLQ-H--RNLVRLLGCCVER-- 563 (760)
Q Consensus 500 ~~~l-G~G~~g~Vy~~~~~-------~~~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~-H--~nIv~l~g~~~~~-- 563 (760)
.+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. | ..+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3667 88888999998764 26678888765332 112356788999988874 3 3577888887665
Q ss_pred -CeeEEEEeccCCCChhh
Q 004345 564 -EENMLIYEYMPNKSLDS 580 (760)
Q Consensus 564 -~~~~lV~Ey~~~gsL~~ 580 (760)
+..++||||+++..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35689999999887764
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=82.14 E-value=3.3 Score=41.32 Aligned_cols=77 Identities=14% Similarity=0.172 Sum_probs=56.5
Q ss_pred ccccCCce-eEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 502 KLGQGGFG-PVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 502 ~lG~G~~g-~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
.+..|..+ .||+-... ++..+++|+-.. .....+.+|..+|+.+. +--+.++++++.+.+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 44445554 68987754 456788887542 23456888999988774 33477889999999999999999999877
Q ss_pred hhh
Q 004345 579 DSF 581 (760)
Q Consensus 579 ~~~ 581 (760)
.+.
T Consensus 108 ~~~ 110 (272)
T 4gkh_A 108 FQV 110 (272)
T ss_dssp HHH
T ss_pred ccc
Confidence 654
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=81.40 E-value=1.7 Score=44.67 Aligned_cols=74 Identities=15% Similarity=0.144 Sum_probs=55.0
Q ss_pred cccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCC---ccceeeeEEE-eCCeeEEEEeccCCC
Q 004345 501 NKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHR---NLVRLLGCCV-EREENMLIYEYMPNK 576 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~---nIv~l~g~~~-~~~~~~lV~Ey~~~g 576 (760)
+.++.|....||+. +..+++|+... ......+.+|+++|..|.+. .+.+++.++. ..+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 56788888899987 56788887532 23356789999999998753 3566777764 345678999999998
Q ss_pred Chhh
Q 004345 577 SLDS 580 (760)
Q Consensus 577 sL~~ 580 (760)
.|..
T Consensus 99 ~l~~ 102 (306)
T 3tdw_A 99 ILGE 102 (306)
T ss_dssp ECHH
T ss_pred ECch
Confidence 8765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 760 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-46 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 4e-44 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 4e-43 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-42 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-41 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-40 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 8e-40 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-39 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 8e-39 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-38 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 3e-38 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-38 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 5e-37 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-36 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 4e-36 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-35 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 6e-35 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 8e-35 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-34 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-31 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 4e-31 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-30 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-30 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-30 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-30 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-29 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 3e-29 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-27 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-26 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-25 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-25 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 6e-25 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-24 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 2e-24 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 4e-17 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 3e-24 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 6e-24 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-23 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 3e-23 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 4e-23 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 9e-15 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 9e-23 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-22 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 4e-22 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-22 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-13 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-21 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-19 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 2e-21 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 1e-14 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-21 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 5e-21 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 1e-16 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-20 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 2e-20 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 3e-20 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-19 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-18 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 1e-18 | |
| d1kj1a_ | 109 | b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium | 4e-18 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 5e-18 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 5e-17 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 5e-17 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 6e-17 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 8e-17 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 3e-15 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-14 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-09 | |
| d1dlpa2 | 120 | b.78.1.1 (A:116-235) Fetuin-binding protein Scafet | 3e-14 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-13 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-07 | |
| d1b2pa_ | 119 | b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill | 2e-13 | |
| d1dlpa1 | 115 | b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p | 6e-13 | |
| d1jpca_ | 108 | b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan | 1e-12 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 6e-12 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 4e-11 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-04 | |
| d1xd5a_ | 112 | b.78.1.1 (A:) Gastrodianin (antifungal protein) {G | 8e-10 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (417), Expect = 2e-46
Identities = 48/280 (17%), Positives = 100/280 (35%), Gaps = 66/280 (23%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ ++G G FG VYKGK + + ++ + Q + F NEV V+ +H N++
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFLF------------------------------- 583
+G + ++ ++ SL L
Sbjct: 68 LFMGYSTA-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 584 --------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM---EGRF 620
DFGLA + ++L G+ +M+PE + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 621 SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680
S +SDV++FG++L E+++G+ Y + + + + V ++
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA-- 241
Query: 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720
+ C+++ +RP P +++ + + LP
Sbjct: 242 ------MKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (399), Expect = 4e-44
Identities = 55/269 (20%), Positives = 98/269 (36%), Gaps = 68/269 (25%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ ++G G FG V+ G + ++A+K + + +E+F+ E V+ L H LV
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF--------------------------------- 581
+L G C+E+ L++E+M + L +
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 123
Query: 582 ------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEK 623
+ DFG+ R +Q ++ + SPE R+S K
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 624 SDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683
SDV+SFGVL+ E+ S K E+ + + + L P ++
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYENRSNSEV--------VEDISTGFRLYKP-------RLA 227
Query: 684 IIRCVNVGLLCVQEFVKDRPNMPTVVSML 712
+ C +E +DRP ++ L
Sbjct: 228 STHVYQIMNHCWKERPEDRPAFSRLLRQL 256
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (391), Expect = 4e-43
Identities = 56/269 (20%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +LG G FG V GK + ++A+K + + S ++EF+ E V+ NL H LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFLF------------------------------- 583
+L G C ++ +I EYM N L ++L
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 122
Query: 584 --------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEK 623
DFGL+R + + ++ + PE M +FS K
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 624 SDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683
SD+++FGVL+ EI S K ++ + ++ + + + +
Sbjct: 182 SDIWAFGVLMWEIYSLGK---------------MPYERFTNSETAEHIAQGLRLYRPHLA 226
Query: 684 IIRCVNVGLLCVQEFVKDRPNMPTVVSML 712
+ + C E +RP ++S +
Sbjct: 227 SEKVYTIMYSCWHEKADERPTFKILLSNI 255
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (388), Expect = 1e-42
Identities = 69/271 (25%), Positives = 99/271 (36%), Gaps = 72/271 (26%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +LG G FG V+ G ++AVK L + S + F+ E ++ LQH+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFLF------------------------------- 583
RL + E +I EYM N SL FL
Sbjct: 72 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 584 ---------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
DFGLAR+ N+ A + +PE G F+
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE-GAKFPIKWTAPEAINYGTFTI 189
Query: 623 KSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP-LISESGFK 681
KSDV+SFG+LL EIV+ + E+ + N +V P E
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV--------IQNLERGYRMVRPDNCPE---- 237
Query: 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVSML 712
+ LC +E +DRP + S+L
Sbjct: 238 ----ELYQLMRLCWKERPEDRPTFDYLRSVL 264
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (379), Expect = 3e-41
Identities = 62/284 (21%), Positives = 98/284 (34%), Gaps = 70/284 (24%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +L KLGQG FG V+ G +A+K L + E F+ E V+ L+H LV
Sbjct: 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 75
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF--------------------------------- 581
+L E ++ EYM SL F
Sbjct: 76 QLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 134
Query: 582 -------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSE 622
+ DFGLAR+ N+ A + +PE A+ GRF+
Sbjct: 135 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTI 193
Query: 623 KSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682
KSDV+SFG+LL E+ + + + + V+D V+
Sbjct: 194 KSDVWSFGILLTELTTKGRVP---------------YPGMVNREVLDQVERGYRMPCPPE 238
Query: 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPA 726
++ C ++ ++RP + + L QP
Sbjct: 239 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 282
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 148 bits (375), Expect = 2e-40
Identities = 57/302 (18%), Positives = 106/302 (35%), Gaps = 83/302 (27%)
Query: 485 FNFEELANATNNF---------QLANKLGQGGFGPVYKGKL----QDGQEIAVKRLSKA- 530
F FE+ A F ++ +G G FG V G L + +A+K L
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 531 SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------- 581
+ + + +F++E ++ H N++ L G + M+I E+M N SLDSF
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 126
Query: 582 ------------------------------------------LFDFGLARIFGGNQDQAA 599
+ DFGL+R +
Sbjct: 127 VIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 186
Query: 600 TKRLVG---TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLG 656
+G + +PE +F+ SDV+S+G+++ E++S +
Sbjct: 187 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE--------------- 231
Query: 657 YAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716
+ + +VI+ ++ + L C Q+ RP +V+ L+ I
Sbjct: 232 RPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 291
Query: 717 KD 718
++
Sbjct: 292 RN 293
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (369), Expect = 8e-40
Identities = 61/302 (20%), Positives = 105/302 (34%), Gaps = 83/302 (27%)
Query: 488 EELANATNNFQLAN-KLGQGGFGPVYKGKLQ---DGQEIAVKRLSKASGQGQ-EEFMNEV 542
++L +N +A+ +LG G FG V +G + ++A+K L + + + EE M E
Sbjct: 1 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 60
Query: 543 MVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLF------------------- 583
++ L + +VRL+G C + E ML+ E L FL
Sbjct: 61 QIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS 119
Query: 584 --------------------------------DFGLARIFGGNQDQ-AATKRLVGTYGYM 610
DFGL++ G + A +
Sbjct: 120 MGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 179
Query: 611 SPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDL 670
+PE +FS +SDV+S+GV + E +S + +K V+
Sbjct: 180 APECINFRKFSSRSDVWSYGVTMWEALSYGQ---------------KPYKKMKGPEVMAF 224
Query: 671 VDPLISESGFKMEII-----RCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQP 725
+ E G +ME + C +DRP+ TV + + L + +
Sbjct: 225 I-----EQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG 279
Query: 726 AF 727
Sbjct: 280 HH 281
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (368), Expect = 2e-39
Identities = 62/308 (20%), Positives = 110/308 (35%), Gaps = 81/308 (26%)
Query: 475 NPARLQDL--LVFNFEELANATNNFQLANKLGQGGFGPVYKGKLQD----GQEIAVKRLS 528
NP +Q + +V L +F +G+G FG VY G L D AVK L+
Sbjct: 10 NPELVQAVQHVVIGPSSL---IVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 64
Query: 529 KASGQGQ-EEFMNEVMVISNLQHRNLVRLLGCCVEREEN-MLIYEYMPNKSLDSF----- 581
+ + G+ +F+ E +++ + H N++ LLG C+ E + +++ YM + L +F
Sbjct: 65 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 124
Query: 582 ----------------------------------------------LFDFGLARIFGGNQ 595
+ DFGLAR +
Sbjct: 125 HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 184
Query: 596 DQAATKR--LVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELT 653
+ + +M+ E +F+ KSDV+SFGVLL E+++ Y +
Sbjct: 185 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFD 242
Query: 654 LLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713
+ L ++ + V L C + RP+ +VS ++
Sbjct: 243 IT---VYLLQGRRLLQ--PEYCPDP--------LYEVMLKCWHPKAEMRPSFSELVSRIS 289
Query: 714 SEIKDLPA 721
+
Sbjct: 290 AIFSTFIG 297
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (361), Expect = 8e-39
Identities = 60/280 (21%), Positives = 97/280 (34%), Gaps = 82/280 (29%)
Query: 501 NKLGQGGFGPVYKGKLQD---GQEIAVKRLSKASGQGQ--EEFMNEVMVISNLQHRNLVR 555
+LG G FG V KG Q + +AVK L + +E + E V+ L + +VR
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 556 LLGCCVEREENMLIYEYMPNKSLDSFLF-------------------------------- 583
++G C E E ML+ E L+ +L
Sbjct: 73 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 131
Query: 584 ------------------DFGLARIFGGNQDQA-ATKRLVGTYGYMSPEYAMEGRFSEKS 624
DFGL++ +++ A + +PE +FS KS
Sbjct: 132 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS 191
Query: 625 DVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684
DV+SFGVL+ E S + ++ + V ++ E G +M
Sbjct: 192 DVWSFGVLMWEAFSYGQ---------------KPYRGMKGSEVTAML-----EKGERMGC 231
Query: 685 I-----RCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDL 719
++ LC V++RP V L + D+
Sbjct: 232 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 271
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 142 bits (359), Expect = 2e-38
Identities = 60/286 (20%), Positives = 106/286 (37%), Gaps = 70/286 (24%)
Query: 486 NFEELANATNNFQLANKLGQGGFGPVYKGKLQD-GQEIAVKRLSKASGQGQEEFMNEVMV 544
N+++ + + +KLG G +G VY+G + +AVK L + + + EEF+ E V
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 66
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLF--------------------- 583
+ ++H NLV+LLG C +I E+M +L +L
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 126
Query: 584 -------------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSP 612
DFGL+R+ G+ A + +P
Sbjct: 127 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA-GAKFPIKWTAP 185
Query: 613 EYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672
E +FS KSDV++FGVLL EI + + + + + V +L++
Sbjct: 186 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSP---------------YPGIDLSQVYELLE 230
Query: 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
+ + + C Q DRP+ + + ++
Sbjct: 231 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 276
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (355), Expect = 3e-38
Identities = 66/281 (23%), Positives = 97/281 (34%), Gaps = 87/281 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+L +G+G FG V G G ++AVK + + F+ E V++ L+H NLV
Sbjct: 7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLV 63
Query: 555 RLLGCCVEREENM-LIYEYMPNKSLDSFLF------------------------------ 583
+LLG VE + + ++ EYM SL +L
Sbjct: 64 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 123
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
DFGL + QD + +PE E +FS
Sbjct: 124 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-----KLPVKWTAPEALREKKFS 178
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681
KSDV+SFG+LL EI S + + +V+ V E G+K
Sbjct: 179 TKSDVWSFGILLWEIYSFGR---------------VPYPRIPLKDVVPRV-----EKGYK 218
Query: 682 MEII-----RCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717
M+ V C RP+ + L IK
Sbjct: 219 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE-HIK 258
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (360), Expect = 3e-38
Identities = 48/276 (17%), Positives = 90/276 (32%), Gaps = 51/276 (18%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQG-QEEFMNEVMVISNLQH 550
++F+ ++LG G G V+K G +A K + + + + E+ V+
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG------LARI-------------- 590
+V G E + E+M SLD L G L ++
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 591 -------------------------FG--GNQDQAATKRLVGTYGYMSPEYAMEGRFSEK 623
FG G + VGT YMSPE +S +
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ 183
Query: 624 SDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683
SD++S G+ L+E+ GR + + L + ++ D
Sbjct: 184 SDIWSMGLSLVEMAVGR--YPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241
Query: 684 IIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDL 719
+ + + + +++ + P + + E +D
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 277
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (347), Expect = 5e-37
Identities = 58/282 (20%), Positives = 91/282 (32%), Gaps = 84/282 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL----QDGQEIAVKRLSK---ASGQGQEEFMNEVMVISN 547
+ +L KLG G FG V +G+ +AVK L + + ++F+ EV + +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF-------------------------- 581
L HRNL+RL G + ++ E P SL
Sbjct: 68 LDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 582 -------------------------LFDFGLARIFGGNQDQ-AATKRLVGTYGYMSPEYA 615
+ DFGL R N D + + + +PE
Sbjct: 127 LESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 616 MEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675
FS SD + FGV L E+ + Y + W N ++ I
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT------------------YGQEPWIGLNGSQILH-KI 227
Query: 676 SESGFKMEII-----RCVNVGLLCVQEFVKDRPNMPTVVSML 712
+ G ++ NV + C +DRP + L
Sbjct: 228 DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (345), Expect = 1e-36
Identities = 54/282 (19%), Positives = 101/282 (35%), Gaps = 73/282 (25%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQE-----IAVKRLSKASGQGQ-EEFMNEVMVISNL 548
+ +G G FG VYKG L+ +A+K L + Q +F+ E ++
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66
Query: 549 QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF--------------------------- 581
H N++RL G + + M+I EYM N +LD F
Sbjct: 67 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 126
Query: 582 ------------------------LFDFGLARIFGGNQDQAAT-KRLVGTYGYMSPEYAM 616
+ DFGL+R+ + + T + +PE
Sbjct: 127 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 186
Query: 617 EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676
+F+ SDV+SFG+++ E+++ + + +++ V+ ++
Sbjct: 187 YRKFTSASDVWSFGIVMWEVMTYGERPYWE---------------LSNHEVMKAINDGFR 231
Query: 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
+ + C Q+ RP +VS+L+ I+
Sbjct: 232 LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (344), Expect = 4e-36
Identities = 50/286 (17%), Positives = 104/286 (36%), Gaps = 83/286 (29%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQE----IAVKRLSKA-SGQGQEEFMNEVMVISNLQH 550
F+ LG G FG VYKG + +G++ +A+K L +A S + +E ++E V++++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSF----------------------------- 581
++ RLLG C+ LI + MP L +
Sbjct: 71 PHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 582 ----------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR 619
+ DFGLA++ G + + + +M+ E +
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189
Query: 620 FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679
++ +SDV+S+GV + E+++ + + + +++ G
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGS---------------KPYDGIPASEISSILE-----KG 229
Query: 680 FKMEI-----IRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720
++ I + + C RP ++ + +D
Sbjct: 230 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 275
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (334), Expect = 3e-35
Identities = 44/274 (16%), Positives = 93/274 (33%), Gaps = 79/274 (28%)
Query: 497 FQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSK--ASGQGQEEFMNEVMVISNLQHRNL 553
+ ++G+G F VYKG + E+A L + ++ F E ++ LQH N+
Sbjct: 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70
Query: 554 VRLLGCCVEREEN----MLIYEYMPNKSLDSF---------------------------- 581
VR + +L+ E M + +L ++
Sbjct: 71 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 130
Query: 582 -------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM 616
+ D GLA + + K ++GT +M+PE
Sbjct: 131 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF----AKAVIGTPEFMAPEM-Y 185
Query: 617 EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676
E ++ E DV++FG+ +LE+ + S ++ ++ D +
Sbjct: 186 EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI------YRRVTSGVKPASFDKVAI 239
Query: 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710
+ C+++ +R ++ +++
Sbjct: 240 PE--------VKEIIEGCIRQNKDERYSIKDLLN 265
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 6e-35
Identities = 46/269 (17%), Positives = 82/269 (30%), Gaps = 67/269 (24%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRN 552
++ L LG+G +G V + +AVK + E E+ + L H N
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLF----------------------------- 583
+V+ G E L EY L +
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 124
Query: 584 ---------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF-S 621
DFGLA +F N + ++ GT Y++PE F +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681
E DV+S G++L +++G + + + W + I +
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQE------YSDWKEKKTYLNPWKKIDSAP-- 236
Query: 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710
+ ++ + E R +P +
Sbjct: 237 LALLHK------ILVENPSARITIPDIKK 259
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 8e-35
Identities = 39/199 (19%), Positives = 76/199 (38%), Gaps = 52/199 (26%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
+ + K+GQG G VY + GQE+A+++++ +E +NE++V+ ++
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 76
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLF--------------------------- 583
N+V L + +E ++ EY+ SL +
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
DFG +Q+ +VGT +M+PE +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQI--TPEQSKRSTMVGTPYWMAPEVVTRKAYG 194
Query: 622 EKSDVFSFGVLLLEIVSGR 640
K D++S G++ +E++ G
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 131 bits (331), Expect = 2e-34
Identities = 51/271 (18%), Positives = 94/271 (34%), Gaps = 78/271 (28%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQE---EFMNEVMVISNLQHRN 552
F ++G G FG VY + +++ + +A+K++S + Q E + + EV + L+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLF----------------------------- 583
++ GC + L+ EY + D
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 584 ---------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM---EGR 619
DFG A I A VGT +M+PE + EG+
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFGSASIM------APANSFVGTPYWMAPEVILAMDEGQ 190
Query: 620 FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679
+ K DV+S G+ +E+ + ++ L ++ P +
Sbjct: 191 YDGKVDVWSLGITCIELAERK---PPLFNMNAMSAL---------YHIAQNESPALQSGH 238
Query: 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710
+ V+ C+Q+ +DRP ++
Sbjct: 239 WSEYFRNFVD---SCLQKIPQDRPTSEVLLK 266
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (308), Expect = 1e-31
Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 59/206 (28%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH 550
N + +++ +LG G FG VYK + + A K + S + E++M E+ ++++ H
Sbjct: 9 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 68
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD-------------------------- 584
N+V+LL ++ E+ ++D+ + +
Sbjct: 69 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 128
Query: 585 -------------------------FGLARIFGGNQDQAATKRLVGTYGYMSPEYAM--- 616
FG++ + + +GT +M+PE M
Sbjct: 129 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCET 186
Query: 617 --EGRFSEKSDVFSFGVLLLEIVSGR 640
+ + K+DV+S G+ L+E+
Sbjct: 187 SKDRPYDYKADVWSLGITLIEMAEIE 212
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (303), Expect = 4e-31
Identities = 47/280 (16%), Positives = 91/280 (32%), Gaps = 73/280 (26%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL----QDGQEIAVKRLSKASGQG-QEEFMNEVMVISNLQ 549
+L +G+G FG V++G +A+K + +E+F+ E + +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLF-------------------------- 583
H ++V+L+G E +I E L SFL
Sbjct: 67 HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 584 -------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGL+R + A+ + +M+PE
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS-KGKLPIKWMAPESINFR 184
Query: 619 RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678
RF+ SDV+ FGV + EI+ + ++ + + + P +
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV------IGRIENGERLPM-PPNCPPT 237
Query: 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
++ C RP + + L++ +++
Sbjct: 238 --------LYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 269
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (301), Expect = 1e-30
Identities = 40/199 (20%), Positives = 64/199 (32%), Gaps = 54/199 (27%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHR 551
+F+ LG+G F V + L +E A+K L K E V+S L H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG------------------------- 586
V+L + E+ Y N L ++ G
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 587 -------------------------LARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
A++ QA VGT Y+SPE E
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 188
Query: 622 EKSDVFSFGVLLLEIVSGR 640
+ SD+++ G ++ ++V+G
Sbjct: 189 KSSDLWALGCIIYQLVAGL 207
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 120 bits (302), Expect = 1e-30
Identities = 36/209 (17%), Positives = 73/209 (34%), Gaps = 58/209 (27%)
Query: 487 FEELANATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE-FMNEVMV 544
+++ + + + + LG G F V + + + +A+K ++K + +G+E NE+ V
Sbjct: 1 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 60
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF----------------------- 581
+ ++H N+V L LI + + L
Sbjct: 61 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAV 120
Query: 582 ------------------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMS 611
+ DFGL+++ GT GY++
Sbjct: 121 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVA 177
Query: 612 PEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
PE + +S+ D +S GV+ ++ G
Sbjct: 178 PEVLAQKPYSKAVDCWSIGVIAYILLCGY 206
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 120 bits (303), Expect = 2e-30
Identities = 41/200 (20%), Positives = 65/200 (32%), Gaps = 57/200 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
+++ + +LG G FG V++ G A K + +E E+ +S L+H L
Sbjct: 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85
Query: 554 VRLLGCCVEREENMLIYEYMPNKSLDSFLFD----------------------------- 584
V L + E ++IYE+M L + D
Sbjct: 86 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY 145
Query: 585 ------------------------FGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
FGL Q K GT + +PE A
Sbjct: 146 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVAEGKPV 202
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
+D++S GVL ++SG
Sbjct: 203 GYYTDMWSVGVLSYILLSGL 222
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 120 bits (303), Expect = 2e-30
Identities = 34/200 (17%), Positives = 65/200 (32%), Gaps = 57/200 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
+ + + +LG G FG V++ G+ K ++ + NE+ +++ L H L
Sbjct: 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88
Query: 554 VRLLGCCVEREENMLIYEYMPNKSLDSFL------------------------------- 582
+ L ++ E +LI E++ L +
Sbjct: 89 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI 148
Query: 583 ----------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
DFGLA ++ K T + +PE
Sbjct: 149 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPV 205
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
+D+++ GVL ++SG
Sbjct: 206 GFYTDMWAIGVLGYVLLSGL 225
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (292), Expect = 1e-29
Identities = 47/196 (23%), Positives = 71/196 (36%), Gaps = 50/196 (25%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQH 550
+F++ LG+G FG VY + Q +A+K L KA + + EV + S+L+H
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG------LARI-------------- 590
N++RL G + LI EY P ++ L A
Sbjct: 66 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 125
Query: 591 ------------------------FG--GNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
FG + + L GT Y+ PE EK
Sbjct: 126 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 185
Query: 625 DVFSFGVLLLEIVSGR 640
D++S GVL E + G+
Sbjct: 186 DLWSLGVLCYEFLVGK 201
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 115 bits (289), Expect = 3e-29
Identities = 37/206 (17%), Positives = 65/206 (31%), Gaps = 59/206 (28%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQ---EEFMNEVMVISNLQ 549
++ ++L LG GG V+ + L+ +++AVK L + F E + L
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 550 HRNLVRLLGCCVEREEN----MLIYEYMPNKSLDSFLFDFG------------------- 586
H +V + ++ EY+ +L + G
Sbjct: 66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 125
Query: 587 --------------------------------LARIFGGNQDQAATKRLVGTYGYMSPEY 614
I T ++GT Y+SPE
Sbjct: 126 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 185
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVSGR 640
A +SDV+S G +L E+++G
Sbjct: 186 ARGDSVDARSDVYSLGCVLYEVLTGE 211
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (280), Expect = 1e-27
Identities = 35/199 (17%), Positives = 66/199 (33%), Gaps = 58/199 (29%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
+ +A LG+G FG V++ + K + K G Q E+ +++ +HRN++
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIARHRNIL 64
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSFL-------------------------------- 582
L EE ++I+E++ + +
Sbjct: 65 HLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG 124
Query: 583 ---------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
+FG AR + + L Y +PE S
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPEVHQHDVVS 181
Query: 622 EKSDVFSFGVLLLEIVSGR 640
+D++S G L+ ++SG
Sbjct: 182 TATDMWSLGTLVYVLLSGI 200
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (269), Expect = 3e-26
Identities = 41/201 (20%), Positives = 69/201 (34%), Gaps = 57/201 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE---FMNEVMVIS-NLQ 549
+F L LG+G FG V+ + + Q A+K L K ++ M E V+S +
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLF-------------------------- 583
H L + +E + EY+ L +
Sbjct: 62 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 121
Query: 584 ------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR 619
DFG+ + + T GT Y++PE + +
Sbjct: 122 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT--FCGTPDYIAPEILLGQK 179
Query: 620 FSEKSDVFSFGVLLLEIVSGR 640
++ D +SFGVLL E++ G+
Sbjct: 180 YNHSVDWWSFGVLLYEMLIGQ 200
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 106 bits (265), Expect = 1e-25
Identities = 40/201 (19%), Positives = 75/201 (37%), Gaps = 59/201 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSK---ASGQGQEEFMNEVMVISNLQH 550
+FQ+ LG G FG V+ + +G+ A+K L K + E +E +++S + H
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSF----------------------------- 581
++R+ G + ++ +I +Y+ L S
Sbjct: 64 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 123
Query: 582 ---------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
+ DFG A+ L GT Y++PE +
Sbjct: 124 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT-----YTLCGTPDYIAPEVVSTKPY 178
Query: 621 SEKSDVFSFGVLLLEIVSGRK 641
++ D +SFG+L+ E+++G
Sbjct: 179 NKSIDWWSFGILIYEMLAGYT 199
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 107 bits (267), Expect = 1e-25
Identities = 44/204 (21%), Positives = 71/204 (34%), Gaps = 62/204 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA---SGQGQEEFMNEVMVIS---N 547
N+F + +G+GGFG VY + G+ A+K L K QG+ +NE +++S
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLF------------------------ 583
+V + ++ I + M L L
Sbjct: 64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 123
Query: 584 --------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAME 617
D GLA F + VGT+GYM+PE +
Sbjct: 124 HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQK 179
Query: 618 GR-FSEKSDVFSFGVLLLEIVSGR 640
G + +D FS G +L +++ G
Sbjct: 180 GVAYDSSADWFSLGCMLFKLLRGH 203
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 103 bits (257), Expect = 6e-25
Identities = 40/199 (20%), Positives = 73/199 (36%), Gaps = 55/199 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVK--RLSKASGQGQEEFMNEVMVISNLQHRN 552
+ K+G+G +G VYK + G+ A+K RL K + E+ ++ L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLF----------------------------- 583
+V+L ++ +L++E++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 584 ---------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAM-EGRFS 621
DFGLAR FG + + + T Y +P+ M ++S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE--IVTLWYRAPDVLMGSKKYS 179
Query: 622 EKSDVFSFGVLLLEIVSGR 640
D++S G + E+V+G
Sbjct: 180 TTIDIWSVGCIFAEMVNGT 198
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (255), Expect = 2e-24
Identities = 49/290 (16%), Positives = 99/290 (34%), Gaps = 64/290 (22%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSK-ASGQGQEEFMNEVMVISN 547
++ +LGQG FG VY+G + +A+K +++ AS + + EF+NE V+
Sbjct: 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79
Query: 548 LQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRL---- 603
++VRLLG + + ++I E M L S+L A + ++
Sbjct: 80 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139
Query: 604 ----------------------------------VGTYGYMSPEYAMEGRFSEKSDVFSF 629
+G +G Y + +
Sbjct: 140 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 199
Query: 630 GVLLLEIVSGRKNTSFYHE-------EFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682
+ E + T++ TL ++ ++ V+ V G +
Sbjct: 200 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV-----MEGGLL 254
Query: 683 EII-----RCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQPAF 727
+ + +C Q K RP+ ++S + E++ P ++ +F
Sbjct: 255 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME--PGFREVSF 302
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 102 bits (254), Expect = 2e-24
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 487 FEELANATNNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSK-ASGQGQEEFM 539
L NN + +G+G FG V++ + + +AVK L + AS Q +F
Sbjct: 5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ 64
Query: 540 NEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAA 599
E +++ + N+V+LLG C + L++EYM L+ FL + + +
Sbjct: 65 REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 124
Query: 600 TKRLVGTYG 608
T+ V + G
Sbjct: 125 TRARVSSPG 133
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 80.7 bits (198), Expect = 4e-17
Identities = 35/148 (23%), Positives = 57/148 (38%), Gaps = 20/148 (13%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
N L+ E M K + DFGL+R A +M PE R++ +S
Sbjct: 169 RNCLVGENMVVK-----IADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTES 223
Query: 625 DVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684
DV+++GV+L EI S + E+ D N++ + E
Sbjct: 224 DVWAYGVVLWEIFSYGLQPYYGMAHEEV------IYYVRDGNILACPENCPLE------- 270
Query: 685 IRCVNVGLLCVQEFVKDRPNMPTVVSML 712
N+ LC + DRP+ ++ +L
Sbjct: 271 --LYNLMRLCWSKLPADRPSFCSIHRIL 296
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (252), Expect = 3e-24
Identities = 37/197 (18%), Positives = 66/197 (33%), Gaps = 59/197 (29%)
Query: 501 NKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE-----FMNEVMVISNLQHRNLV 554
+ LG+G F VYK + Q +A+K++ ++ + E+ ++ L H N++
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 555 RLLGCCVEREENMLIYEYMPNKSLDSF--------------------------------- 581
LL + L++++M
Sbjct: 64 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 123
Query: 582 -----------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-FSEK 623
L DFGLA+ FG A V T Y +PE R +
Sbjct: 124 RDLKPNNLLLDENGVLKLADFGLAKSFG--SPNRAYTHQVVTRWYRAPELLFGARMYGVG 181
Query: 624 SDVFSFGVLLLEIVSGR 640
D+++ G +L E++
Sbjct: 182 VDMWAVGCILAELLLRV 198
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (253), Expect = 6e-24
Identities = 30/206 (14%), Positives = 68/206 (33%), Gaps = 57/206 (27%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQ-EEFMNEVMVISNLQ 549
+ + + +G+G +G V + +A+K++S Q + + E+ ++ +
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 64
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDF------------------------ 585
H N++ + + Y+ + + L+
Sbjct: 65 HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKY 124
Query: 586 -----------------------------GLARIFGGNQDQAAT-KRLVGTYGYMSPEYA 615
GLAR+ + D V T Y +PE
Sbjct: 125 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 184
Query: 616 MEGR-FSEKSDVFSFGVLLLEIVSGR 640
+ + +++ D++S G +L E++S R
Sbjct: 185 LNSKGYTKSIDIWSVGCILAEMLSNR 210
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.6 bits (245), Expect = 2e-23
Identities = 39/208 (18%), Positives = 62/208 (29%), Gaps = 66/208 (31%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE------FMNEVMVISN 547
+ +Q+ LG GGFG VY G + D +A+K + K E EV+++
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 548 LQ--HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL----------------------- 582
+ ++RLL + +LI E
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 583 -----------------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPE 613
DFG + GT Y PE
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPPE 179
Query: 614 YAMEGRF-SEKSDVFSFGVLLLEIVSGR 640
+ R+ + V+S G+LL ++V G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGD 207
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.4 bits (244), Expect = 3e-23
Identities = 42/200 (21%), Positives = 71/200 (35%), Gaps = 57/200 (28%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSK--ASGQGQEEFMNEVMVISNLQHRN 552
NFQ K+G+G +G VYK + G+ +A+K++ + + E+ ++ L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 553 LVRLLGCCVEREENMLIYEYMPNKSLDSFLF----------------------------- 583
+V+LL + L++E++
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 584 ----------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPE-YAMEGRF 620
DFGLAR FG + V T Y +PE +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE--VVTLWYRAPEILLGCKYY 180
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
S D++S G + E+V+ R
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.7 bits (245), Expect = 4e-23
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKASGQGQ-EEFMNEVMVISN 547
N LG G FG V + +AVK L ++ + E M+E+ V+S
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 548 L-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFG 592
L H N+V LLG C ++I EY L +FL + I
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 128
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.7 bits (180), Expect = 9e-15
Identities = 30/172 (17%), Positives = 54/172 (31%), Gaps = 28/172 (16%)
Query: 547 NLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGT 606
N HR+L N+L+ K + DFGLAR + +
Sbjct: 165 NCIHRDL---------AARNILLTHGRITK-----ICDFGLARDIKNDSNYVVKGNARLP 210
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+M+PE ++ +SDV+S+G+ L E+ S + +
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK------FYKMIKEG 264
Query: 667 VIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718
L ++ C RP +V ++ +I +
Sbjct: 265 FRMLSPEHAPA--------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.1 bits (241), Expect = 9e-23
Identities = 36/207 (17%), Positives = 69/207 (33%), Gaps = 58/207 (28%)
Query: 492 NATNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS------GQGQEEFMNEVMV 544
N + + +LG G F V K + G + A K + K G +E+ EV +
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 545 ISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSF----------------------- 581
+ +QH N++ L + + +LI E + L F
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126
Query: 582 ---------LFDFGLARIFGGNQDQAATKRLVGTYG-------------------YMSPE 613
FD I +++ + + +G +++PE
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 614 YAMEGRFSEKSDVFSFGVLLLEIVSGR 640
++D++S GV+ ++SG
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGA 213
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 95.9 bits (238), Expect = 2e-22
Identities = 37/226 (16%), Positives = 74/226 (32%), Gaps = 72/226 (31%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASG---------QGQEEFMNEVMVI 545
N++ LG+G V + +E AVK + G + +E + EV ++
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 546 SNLQ-HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLF--------------------- 583
+ H N+++L L+++ M L +L
Sbjct: 64 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 123
Query: 584 -----------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEY 614
DFG + + + + GT Y++PE
Sbjct: 124 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEI 180
Query: 615 AMEGR------FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTL 654
+ ++ D++S GV++ +++G F+H + L L
Sbjct: 181 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS--PPFWHRKQMLML 224
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.7 bits (237), Expect = 4e-22
Identities = 37/210 (17%), Positives = 75/210 (35%), Gaps = 64/210 (30%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQG--QEEFMNEVMVISNLQHR 551
+ ++ K+GQG FG V+K + + GQ++A+K++ + + + E+ ++ L+H
Sbjct: 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69
Query: 552 NLVRLLGCCVEREENM--------LIYEYMPNKSLDSF---------------------- 581
N+V L+ C + L++++ +
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129
Query: 582 ----------------------------LFDFGLARIFGGNQDQAATKR--LVGTYGYMS 611
L DFGLAR F ++ + V T Y
Sbjct: 130 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRP 189
Query: 612 PEYAMEGR-FSEKSDVFSFGVLLLEIVSGR 640
PE + R + D++ G ++ E+ +
Sbjct: 190 PELLLGERDYGPPIDLWGAGCIMAEMWTRS 219
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.7 bits (235), Expect = 4e-22
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 496 NFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRN 552
++++ +G G +G K + DG+ + K L S ++ ++EV ++ L+H N
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64
Query: 553 LVRLLGCCVEREENM--LIYEYMPNKSLDSFLFDFGLAR 589
+VR ++R ++ EY L S + R
Sbjct: 65 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 103
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.1 bits (166), Expect = 4e-13
Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 521 EIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDS 580
E V R+ +E + HR+L + N+ + K
Sbjct: 108 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL---------KPANVFLDGKQNVK---- 154
Query: 581 FLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
L DFGLARI N D + K VGT YMSPE ++EKSD++S G LL E+ +
Sbjct: 155 -LGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 211
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.8 bits (232), Expect = 1e-21
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
L +G+G FG V++GK G+E+AVK S + E+ L+H N++
Sbjct: 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENIL 60
Query: 555 RLLGCCVEREEN----MLIYEYMPNKSLDSFLFDFGL 587
+ + L+ +Y + SL +L + +
Sbjct: 61 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 97
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.6 bits (216), Expect = 2e-19
Identities = 30/181 (16%), Positives = 60/181 (33%), Gaps = 27/181 (14%)
Query: 547 NLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQD--QAATKRLV 604
+ HR+L + +N+L+ + + D GLA D A V
Sbjct: 128 AIAHRDL---------KSKNILVKKNGTCC-----IADLGLAVRHDSATDTIDIAPNHRV 173
Query: 605 GTYGYMSPEYAME------GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEE----FELTL 654
GT YM+PE + +++D+++ G++ EI + + ++L
Sbjct: 174 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233
Query: 655 LGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCV-NVGLLCVQEFVKDRPNMPTVVSMLN 713
+ + + P I E +R + + C R + L+
Sbjct: 234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293
Query: 714 S 714
Sbjct: 294 Q 294
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.7 bits (232), Expect = 2e-21
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQDG---QEIAVKRLSK-ASGQGQEEFMNEVMVISNL-Q 549
N+ + + +G+G FG V K +++ + A+KR+ + AS +F E+ V+ L
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFL 582
H N++ LLG C R L EY P+ +L FL
Sbjct: 70 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 102
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.9 bits (178), Expect = 1e-14
Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 42/179 (23%)
Query: 547 NLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGT 606
HR+L N+L+ E K + DFGL+R G +
Sbjct: 147 QFIHRDL---------AARNILVGENYVAK-----IADFGLSR---GQEVYVKKTMGRLP 189
Query: 607 YGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN 666
+M+ E ++ SDV+S+GVLL EIVS +
Sbjct: 190 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP------------------YCGMT 231
Query: 667 VIDLVDPLISESGFKMEII-----RCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720
+L + L G+++E ++ C +E +RP+ ++ LN +++
Sbjct: 232 CAELYEKL--PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 288
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.1 bits (233), Expect = 2e-21
Identities = 42/200 (21%), Positives = 65/200 (32%), Gaps = 56/200 (28%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEE---FMNEVMVISNLQH 550
N+F LG+G FG V + G+ A+K L K ++E + E V+ N +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSF----------------------------- 581
L L + + EY L
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 582 ---------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
+ DFGL + G D A K GT Y++PE + +
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
D + GV++ E++ GR
Sbjct: 183 GRAVDWWGLGVVMYEMMCGR 202
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.5 bits (229), Expect = 5e-21
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 495 NNFQLANKLGQGGFGPVYKGKLQD------GQEIAVKRLSKASGQGQ-EEFMNEVMVISN 547
N + LG G FG V ++AVK L + + + E M+E+ +++
Sbjct: 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96
Query: 548 L-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFD 584
L H N+V LLG C LI+EY L ++L
Sbjct: 97 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRS 134
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.8 bits (196), Expect = 1e-16
Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 28/167 (16%)
Query: 550 HRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGY 609
HR+L N+L+ + DFGLAR + + +
Sbjct: 187 HRDL---------AARNVLV-----THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKW 232
Query: 610 MSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVID 669
M+PE EG ++ KSDV+S+G+LL EI S + + +KL + +D
Sbjct: 233 MAPESLFEGIYTIKSDVWSYGILLWEIFSLGV-NPYPGIPVDANF----YKLIQNGFKMD 287
Query: 670 LVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716
+E + C + RP+ P + S L ++
Sbjct: 288 Q-PFYATE--------EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL 325
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 90.6 bits (224), Expect = 2e-20
Identities = 39/285 (13%), Positives = 85/285 (29%), Gaps = 69/285 (24%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQ--EEFMNE---------- 541
++++ ++G+G FG +++G L + Q++A+K + S Q +E+
Sbjct: 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIP 64
Query: 542 --------------VMVISNLQHRNLVRLLGCCVEREE---------------------- 565
V+ + +L+ L G +
Sbjct: 65 NVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 124
Query: 566 ------NMLIYEYMPNKSLDSFLFDFGLARIF-----GGNQDQAATKRLVGTYGYMSPEY 614
N LI + ++ DFG+ + + + K L GT YMS
Sbjct: 125 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINT 184
Query: 615 AMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674
+ S + D+ + G + + + G K
Sbjct: 185 HLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN------KQKYERIGEKKQSTPLR 238
Query: 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDL 719
+GF E + ++ P+ + + + ++ L
Sbjct: 239 ELCAGFPEEFYKYMH---YARNLAFDATPDYDYLQGLFSKVLERL 280
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.4 bits (223), Expect = 2e-20
Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 54/200 (27%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHR 551
++ K+G+G +G V+K K + + +A+KR+ + E+ ++ L+H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 552 NLVRLLGCCVEREENMLIYEYMPNKSLDSF------------------------------ 581
N+VRL ++ L++E+ F
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 582 --------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFS 621
L +FGLAR FG + + +V + +S
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 622 EKSDVFSFGVLLLEIVSGRK 641
D++S G + E+ + +
Sbjct: 181 TSIDMWSAGCIFAELANAGR 200
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 90.3 bits (223), Expect = 3e-20
Identities = 41/278 (14%), Positives = 95/278 (34%), Gaps = 67/278 (24%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRN 552
+++QL KLG+G + V++ + + +++ VK L +++ E+ ++ NL+ N
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPN 91
Query: 553 LVRLLGCCVEREENM--LIYEYMPNKSLDSF----------------------------- 581
++ L + L++E++ N
Sbjct: 92 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIM 151
Query: 582 -------------------LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGR-FS 621
L D+GLA + Q+ V + + PE ++ + +
Sbjct: 152 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELLVDYQMYD 208
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681
D++S G +L ++ + F+H L K+ ++ D +D E +
Sbjct: 209 YSLDMWSLGCMLASMIFRK--EPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 266
Query: 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDL 719
I + + + + +++ E D
Sbjct: 267 FNDILGRHSRKRWERFVHSENQH------LVSPEALDF 298
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.2 bits (215), Expect = 2e-19
Identities = 50/284 (17%), Positives = 89/284 (31%), Gaps = 69/284 (24%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL--------QDGQEIAVKRLSK-ASGQGQEEFMNEVMVI 545
+ L LG+G FG V + ++AVK L A+ + + ++E+ ++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 546 SNL-QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG------------------ 586
+ +H+N++ LLG C + +I EY +L +L
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 132
Query: 587 ----LARIFGG--------------NQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVF- 627
L ++D AA LV M R D +
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 628 -------SFGVLLLEIVSGRKNT------SFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674
+ E + R T SF +E+ LG + + V +L
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFK-- 248
Query: 675 ISESGFKMEII-----RCVNVGLLCVQEFVKDRPNMPTVVSMLN 713
+ + G +M+ + C RP +V L+
Sbjct: 249 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.0 bits (212), Expect = 1e-18
Identities = 30/199 (15%), Positives = 69/199 (34%), Gaps = 53/199 (26%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSK--ASGQGQEEFMNEVMVISNLQHR 551
++ +G G +G V + G ++A+K+L + S + E+ ++ +++H
Sbjct: 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77
Query: 552 NLVRLLGCCVERE------ENMLIYEYM-------------------------------- 573
N++ LL E + L+ +M
Sbjct: 78 NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI 137
Query: 574 -----------PNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG-RFS 621
P + + + Q + V T Y +PE + R++
Sbjct: 138 HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYT 197
Query: 622 EKSDVFSFGVLLLEIVSGR 640
+ D++S G ++ E+++G+
Sbjct: 198 QTVDIWSVGCIMAEMITGK 216
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.2 bits (212), Expect = 1e-18
Identities = 36/202 (17%), Positives = 66/202 (32%), Gaps = 59/202 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHR 551
+Q +G G G V + +A+K+LS+ + + E++++ + H+
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 552 NLVRLLGCCV------EREENMLIYEYMPNKSLDSFL----------------------- 582
N++ LL E ++ L+ E M
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 583 ------------------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEG 618
DFGLAR G + V T Y +PE +
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGM 193
Query: 619 RFSEKSDVFSFGVLLLEIVSGR 640
+ E D++S G ++ E+V +
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHK 215
|
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Garlic (Allium sativum) [TaxId: 4682]
Score = 78.5 bits (193), Expect = 4e-18
Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 14/115 (12%)
Query: 36 PESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTI 95
+ +G + + + + ++ + T VW +N +
Sbjct: 6 NGEGLYAGQSLDVEPYHF-IMQEDCNLVLYDHS------TSVWASNTGILGKKGCKA-VL 57
Query: 96 SEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSF 150
DGN VV + + + W+S+ N N L + GN+V++ + IW +
Sbjct: 58 QSDGNFVVYDAEGRSLWASHSVR--GNGNYVLVLQEDGNVVIYGS----DIWSTG 106
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.4 bits (205), Expect = 5e-18
Identities = 41/285 (14%), Positives = 77/285 (27%), Gaps = 63/285 (22%)
Query: 495 NNFQLANKLGQGGFGPVYKG------KLQDGQEIAVKRLSKASGQG-QEEFMNEVMVIS- 546
+ +L LG+G FG V + K + +AVK L + + M+E+ ++
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72
Query: 547 NLQHRNLVRLLGCCVEREEN-MLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRL-- 603
H N+V LLG C + M+I E+ +L ++L + + K
Sbjct: 73 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132
Query: 604 ------------------------------------------VGTYGYMSPEYAMEGRFS 621
+ +G Y
Sbjct: 133 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 192
Query: 622 EKSDVFSFGVLLLEIVSGRKNTSFYHEEFE----LTLLGYAWKLWNDNNVIDLVDPLISE 677
+ + E + R T + + + + + E
Sbjct: 193 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 252
Query: 678 SGFKMEII-----RCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717
G +M L C RP +V L + ++
Sbjct: 253 -GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.1 bits (199), Expect = 5e-17
Identities = 27/200 (13%), Positives = 65/200 (32%), Gaps = 53/200 (26%)
Query: 494 TNNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQH 550
+Q + +G G +G V + G +AVK+LS+ S + E+ ++ +++H
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 551 RNLVRLLGCCVERE-----ENMLIYEYMP------------------------------- 574
N++ LL ++ + ++
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 575 --------------NKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRF 620
N +++ L + D T + + +
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHY 196
Query: 621 SEKSDVFSFGVLLLEIVSGR 640
++ D++S G ++ E+++GR
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.0 bits (199), Expect = 5e-17
Identities = 33/204 (16%), Positives = 63/204 (30%), Gaps = 63/204 (30%)
Query: 496 NFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLV 554
++ +G G FG VY+ KL G+ +A+K++ + + E+ ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIV 76
Query: 555 RLLGCCVEREENM------LIYEYMPNKSLDSFL--------FDFGLARIFG-------- 592
RL E L+ +Y+P +++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 593 -------------------------------GNQDQAATKRLVGTYGYMSPEYAM----- 616
G+ Q +Y A
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 617 EGRFSEKSDVFSFGVLLLEIVSGR 640
++ DV+S G +L E++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.3 bits (197), Expect = 6e-17
Identities = 43/207 (20%), Positives = 72/207 (34%), Gaps = 62/207 (29%)
Query: 495 NNFQLANKLGQGGFGPVYKGKL----QDGQEIAVKRLSKAS----GQGQEEFMNEVMVIS 546
NF+L LG G +G V+ + G+ A+K L KA+ + E E V+
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 547 NLQHR-NLVRLLGCCVEREENMLIYEYMPNKSLDSFLF---------------------- 583
+++ LV L + LI +Y+ L + L
Sbjct: 84 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 143
Query: 584 ----------------------------DFGLARIFGGNQDQAATKRLVGTYGYMSPEYA 615
DFGL++ F ++ + GT YM+P+
Sbjct: 144 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIV 202
Query: 616 MEGR--FSEKSDVFSFGVLLLEIVSGR 640
G + D +S GVL+ E+++G
Sbjct: 203 RGGDSGHDKAVDWWSLGVLMYELLTGA 229
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 80.2 bits (197), Expect = 8e-17
Identities = 38/195 (19%), Positives = 65/195 (33%), Gaps = 49/195 (25%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSK---ASGQGQEEFMNEVMVISNLQH 550
+ F LG G FG V K + G A+K L K + E +NE ++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 551 RNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFG------------------------ 586
LV+L + ++ EY+ + S L G
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 587 --------------------LARIFG-GNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSD 625
FG + + T L GT ++PE + +++ D
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVD 220
Query: 626 VFSFGVLLLEIVSGR 640
++ GVL+ E+ +G
Sbjct: 221 WWALGVLIYEMAAGY 235
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 74.9 bits (183), Expect = 3e-15
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 495 NNFQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNL 553
N ++L K+G G FG +Y G + G+E+A+K + + E + +Q
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVG 64
Query: 554 VRLLG-CCVEREENMLIYEYMPNKSLD 579
+ + C E + N+++ E + D
Sbjct: 65 IPTIRWCGAEGDYNVMVMELLGPSLED 91
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.6 bits (177), Expect = 2e-14
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 493 ATNNFQLANKLGQGGFGPVYKGK--LQDGQEIAVKRLSKASGQG--QEEFMNEVMVISNL 548
A ++ ++G+G +G V+K + G+ +A+KR+ +G+ + EV V+ +L
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64
Query: 549 ---QHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGG 593
+H N+VRL C + + + +D L + G
Sbjct: 65 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG 112
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.2 bits (137), Expect = 2e-09
Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 27/155 (17%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
+N+L+ K D FGLARI+ +V T Y +PE ++ ++
Sbjct: 145 QNILVTSSGQIKLAD-----FGLARIYSFQMAL---TSVVVTLWYRAPEVLLQSSYATPV 196
Query: 625 DVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684
D++S G + E+ + L+ ++ +D + ++ G E
Sbjct: 197 DLWSVGCIFAEMFRRK-------------------PLFRGSSDVDQLGKILDVIGLPGEE 237
Query: 685 IRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDL 719
+V L K + V+ ++ KDL
Sbjct: 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDL 272
|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Score = 67.6 bits (165), Expect = 3e-14
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 12/105 (11%)
Query: 54 DGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWS 113
+GN I Y+ N + + L S ++ D NLV+ + +V WS
Sbjct: 8 NGNS------ILYST--QGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDRDDRV-WS 58
Query: 114 SNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFY 158
+N + + RA L +G + + N +++W S + Y
Sbjct: 59 TNTAG--KGTGCRAVLQPNGRMDVLTN-QNIAVWTSGNSRSAGRY 100
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.9 bits (173), Expect = 1e-13
Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 12/103 (11%)
Query: 495 NNFQLANK-LGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNL-QHR 551
+++++ ++ LG G G V + + ++ A+K L + EV + Q
Sbjct: 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCP 65
Query: 552 NLVRLLGCC----VEREENMLIYEYMPNKSLDSFLFDFGLARI 590
++VR++ R+ +++ E + L S + D G
Sbjct: 66 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 108
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.6 bits (123), Expect = 1e-07
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 546 SNLQHRNLVRLLGCCVEREENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVG 605
N+ HR++ + EN+L PN L L DFG A+ +
Sbjct: 130 INIAHRDV---------KPENLLYTSKRPNAILK--LTDFGFAKETTSHNSLTTPCY--- 175
Query: 606 TYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR 640
T Y++PE ++ + D++S GV++ ++ G
Sbjct: 176 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 210
|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Bluebell (Scilla campanulata) [TaxId: 81759]
Score = 65.0 bits (158), Expect = 2e-13
Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 24/136 (17%)
Query: 14 FYSDFGTATATDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSAN 73
+S + +++ + I+ ++ + D N + Y+ N
Sbjct: 4 IFSKQPDDNHPQILHATESL----EILFGTHVYRFIMQT-DCNL------VLYD-----N 47
Query: 74 KTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSG 133
+W N + DG LVV+ + W S V+ + L
Sbjct: 48 NNPIWATNTGGLGNGC--RAVLQPDGVLVVITNENVTVWQSPVAG--KAGHYVLVLQPDR 103
Query: 134 NLVLHDNISQVSIWDS 149
N+V++ + ++W +
Sbjct: 104 NVVIYGD----ALWAT 115
|
| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Score = 63.8 bits (155), Expect = 6e-13
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 64 IWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNS 123
I + S + + + L SS FT+ D NLV+ + +V W+SN + +
Sbjct: 3 ILFGL--SHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDSDVRV-WASNTA---GAT 56
Query: 124 NTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYS 159
RA L G LV+ W S + + Y
Sbjct: 57 GCRAVLQSDGLLVILTA-QNTIRWSSGTKGSIGNYV 91
|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Snowdrop (Galanthus nivalis) [TaxId: 4670]
Score = 62.7 bits (152), Expect = 1e-12
Identities = 24/126 (19%), Positives = 38/126 (30%), Gaps = 22/126 (17%)
Query: 25 DTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNK 84
+ + S + + E + F D N +W N
Sbjct: 2 NILYSGETLSTGEFLNYG--SFVFIMQE-DCNLVLYD-----------VDKPIWATNTGG 47
Query: 85 PLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQV 144
S ++ DGNLVV N + W+SN N N L N+V++
Sbjct: 48 L--SRSCFLSMQTDGNLVVYNPSNKPIWASNTGG--QNGNYVCILQKDRNVVIYGT---- 99
Query: 145 SIWDSF 150
W +
Sbjct: 100 DRWATG 105
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 62.9 bits (152), Expect = 6e-12
Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 14/92 (15%)
Query: 499 LANKLGQGGFGPVYKGKLQDGQEIAVK--RLSKASGQ--------GQEEFMNEVMVISNL 548
+ +G+G V+ + E VK ++ S + G F + +
Sbjct: 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARN 63
Query: 549 QHRNLVRLLGCCVER----EENMLIYEYMPNK 576
+ R L +L G V + E N ++ E + K
Sbjct: 64 EFRALQKLQGLAVPKVYAWEGNAVLMELIDAK 95
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 63.1 bits (152), Expect = 4e-11
Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 497 FQLANKLGQGGFGPVYKGK-LQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVR 555
+ L KLG G F V+ K + + +A+K + E +E+ ++ + + +
Sbjct: 15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTK 73
Query: 556 LLGCCVEREENMLIYEYMPNKS 577
+L + +
Sbjct: 74 EDSMGANHILKLLDHFNHKGPN 95
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.7 bits (99), Expect = 1e-04
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 565 ENMLIYEYMPNKSLDSFLFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKS 624
EN+L+ L +A + + T Y SPE + + +
Sbjct: 155 ENVLMEI----VDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGA 210
Query: 625 DVFSFGVLLLEIVSGR 640
D++S L+ E+++G
Sbjct: 211 DIWSTACLIFELITGD 226
|
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Gastrodianin (antifungal protein) species: Gastrodia elata [TaxId: 91201]
Score = 54.8 bits (131), Expect = 8e-10
Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 20/132 (15%)
Query: 24 TDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRN 83
+D + S + S+ + + D N + Y+ N VW + N
Sbjct: 1 SDRLNSGHQLDTGGSLAEG--GYLFIIQN-DCNL------VLYD-----NNRAVWASGTN 46
Query: 84 KPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQ 143
+ + DGNLV+ +G + + S+ N N L N+V++DN S
Sbjct: 47 GKASGC--VLKMQNDGNLVIYSGSRAIWASNTNRQ---NGNYYLILQRDRNVVIYDN-SN 100
Query: 144 VSIWDSFQEPTD 155
+IW + +
Sbjct: 101 NAIWATHTNVGN 112
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 760 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 99.98 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.98 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.98 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.98 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 99.98 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 99.98 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.98 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.97 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.97 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.97 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.97 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.97 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 99.97 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 99.97 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.97 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.97 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.97 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.97 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 99.96 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.96 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.96 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.96 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.96 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.96 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.96 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.95 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.95 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.95 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.95 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.95 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.95 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.95 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.94 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.94 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.93 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.9 | |
| d1xd5a_ | 112 | Gastrodianin (antifungal protein) {Gastrodia elata | 99.83 | |
| d1kj1a_ | 109 | Lectin (agglutinin) {Garlic (Allium sativum) [TaxI | 99.8 | |
| d1jpca_ | 108 | Lectin (agglutinin) {Snowdrop (Galanthus nivalis) | 99.8 | |
| d1dlpa2 | 120 | Fetuin-binding protein Scafet precursor {Bluebell | 99.64 | |
| d1b2pa_ | 119 | Lectin (agglutinin) {Bluebell (Scilla campanulata) | 99.56 | |
| d1dlpa1 | 115 | Fetuin-binding protein Scafet precursor {Bluebell | 99.54 | |
| d1dlpa1 | 115 | Fetuin-binding protein Scafet precursor {Bluebell | 99.28 | |
| d1dlpa2 | 120 | Fetuin-binding protein Scafet precursor {Bluebell | 98.96 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 98.93 | |
| d1b2pa_ | 119 | Lectin (agglutinin) {Bluebell (Scilla campanulata) | 98.81 | |
| d1jpca_ | 108 | Lectin (agglutinin) {Snowdrop (Galanthus nivalis) | 98.78 | |
| d1kj1a_ | 109 | Lectin (agglutinin) {Garlic (Allium sativum) [TaxI | 98.75 | |
| d1xd5a_ | 112 | Gastrodianin (antifungal protein) {Gastrodia elata | 98.34 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 92.95 | |
| d1emoa2 | 39 | Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | 92.93 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 86.3 | |
| d2vj3a1 | 42 | Neurogenic locus notch homolog protein 1, Notch1 { | 83.39 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-37 Score=316.59 Aligned_cols=205 Identities=27% Similarity=0.446 Sum_probs=151.5
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
++|++.++||+|+||.||+|++.+++.||||+++.. ....++|.+|++++++++|||||+++|+|.+++..++||||++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~ 83 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence 578899999999999999999988899999999754 3456789999999999999999999999999999999999999
Q ss_pred CCChhhhh---------------------------------------------------ccccceeEecCCCccccccee
Q 004345 575 NKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 575 ~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
+|+|.+++ +|||+++....... ......
T Consensus 84 ~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~-~~~~~~ 162 (263)
T d1sm2a_ 84 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGT 162 (263)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-----------------
T ss_pred CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCc-eeecce
Confidence 99998873 49999987643322 223345
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
.||+.|||||++....++.|+|||||||++|||+|+..|+...... ..+...+.. +. ....+ ...
T Consensus 163 ~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~--~~~~~~i~~----~~--~~~~p-------~~~ 227 (263)
T d1sm2a_ 163 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDIST----GF--RLYKP-------RLA 227 (263)
T ss_dssp --CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH--HHHHHHHHH----TC--CCCCC-------TTS
T ss_pred ecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH--HHHHHHHHh----cC--CCCCc-------ccc
Confidence 7899999999999999999999999999999999965554322111 111111111 10 00111 112
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
..++.+++.+||+.||++||||+||+++|+++.
T Consensus 228 ~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~ 260 (263)
T d1sm2a_ 228 STHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA 260 (263)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 246778999999999999999999999998764
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-36 Score=314.85 Aligned_cols=207 Identities=30% Similarity=0.431 Sum_probs=160.4
Q ss_pred HHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 491 ANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 491 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
+...++|++.++||+|+||.||+|++++++.||||+++.. ....++|.+|+++|++++|||||+++|++.+ +..+|||
T Consensus 9 ei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~ 86 (272)
T d1qpca_ 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (272)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEE
Confidence 3345789999999999999999999988899999999754 3456789999999999999999999998754 5679999
Q ss_pred eccCCCChhhhh----------------------------------------------------ccccceeEecCCCccc
Q 004345 571 EYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 571 Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||+++|+|.+++ +|||+|+.+......
T Consensus 87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~- 165 (272)
T d1qpca_ 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT- 165 (272)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE-
T ss_pred EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCccc-
Confidence 999999998752 499999987543322
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
......||+.|||||++..+.++.|+|||||||++|||+||..|+...... ..+...+ ..+. .+.....
T Consensus 166 ~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~--~~~~~~i----~~~~-----~~~~p~~ 234 (272)
T d1qpca_ 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNL----ERGY-----RMVRPDN 234 (272)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHH----HTTC-----CCCCCTT
T ss_pred cccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH--HHHHHHH----HhcC-----CCCCccc
Confidence 233467899999999999999999999999999999999976665422211 1111111 1111 1111111
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
....+.+++.+||+.||++||||+||+++|+..
T Consensus 235 ----~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ 267 (272)
T d1qpca_ 235 ----CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (272)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----ChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhh
Confidence 224577899999999999999999999999864
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-36 Score=313.21 Aligned_cols=215 Identities=24% Similarity=0.397 Sum_probs=157.5
Q ss_pred HhccccccccccccCCceeEEEEEecCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
...++|++.++||+|+||.||+|+.+ ..||||+++.. .....+.|.+|+++|++++|||||+++|++.+ +..+||
T Consensus 5 i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv 81 (276)
T d1uwha_ 5 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIV 81 (276)
T ss_dssp CCTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred cccccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEE
Confidence 34577899999999999999999865 46999999743 34556789999999999999999999999754 568999
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||||++|+|.++| +|||+|+.........
T Consensus 82 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~ 161 (276)
T d1uwha_ 82 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161 (276)
T ss_dssp EECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred EecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence 9999999998874 4999998765444334
Q ss_pred ccceeeeeccccCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 599 ATKRLVGTYGYMSPEYAME---GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~---~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
......||+.|||||++.. ..++.++|||||||+||||+||+.||........ +..............+ +
T Consensus 162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~p~~~~-----~ 234 (276)
T d1uwha_ 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIFMVGRGYLSPDLSK-----V 234 (276)
T ss_dssp ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH--HHHHHHHTSCCCCGGG-----S
T ss_pred cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH--HHHHHhcCCCCCcchh-----c
Confidence 4456789999999999864 4589999999999999999999999864322211 1111111111111111 1
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCC
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLP 720 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~ 720 (760)
.. .....+.+++.+||+.||++||||+||+++|+.+.+.+|
T Consensus 235 ~~----~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~P 275 (276)
T d1uwha_ 235 RS----NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275 (276)
T ss_dssp CT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred cc----cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcCC
Confidence 11 122467788999999999999999999999998866555
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-36 Score=308.32 Aligned_cols=202 Identities=28% Similarity=0.473 Sum_probs=162.1
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccC
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMP 574 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 574 (760)
++|++.++||+|+||+||+|+.++++.||||++++. ....++|++|+.++++++|||||+++|+|.+++..++||||++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~-~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcC-cCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence 678899999999999999999988889999999764 3456789999999999999999999999999999999999999
Q ss_pred CCChhhhh---------------------------------------------------ccccceeEecCCCccccccee
Q 004345 575 NKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 575 ~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 603 (760)
+|+|..++ +|||+++.+..... ......
T Consensus 83 ~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~ 161 (258)
T d1k2pa_ 83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGS 161 (258)
T ss_dssp TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSC-CCCCCS
T ss_pred CCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCc-eeeccc
Confidence 99998762 49999987654332 233346
Q ss_pred eeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHH
Q 004345 604 VGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKM 682 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 682 (760)
.||+.|||||.+....++.|+|||||||++|||+| |+.||......+ +.. ....+.. ...| ..
T Consensus 162 ~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~---~~~----~i~~~~~--~~~p-------~~ 225 (258)
T d1k2pa_ 162 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE---TAE----HIAQGLR--LYRP-------HL 225 (258)
T ss_dssp CCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH---HHH----HHHTTCC--CCCC-------TT
T ss_pred CCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH---HHH----HHHhCCC--CCCc-------cc
Confidence 78999999999999999999999999999999998 788886443221 111 1111111 1111 11
Q ss_pred HHHHHHHHHHhcccCCcCCCCCHHHHHHHHhc
Q 004345 683 EIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNS 714 (760)
Q Consensus 683 ~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 714 (760)
....+.+++.+||+.||++|||+.+|++.|.+
T Consensus 226 ~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d 257 (258)
T d1k2pa_ 226 ASEKVYTIMYSCWHEKADERPTFKILLSNILD 257 (258)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred ccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence 22467789999999999999999999999854
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.9e-36 Score=316.18 Aligned_cols=207 Identities=25% Similarity=0.406 Sum_probs=149.5
Q ss_pred cccccccccccCCceeEEEEEecC-C---cEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQD-G---QEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
++|++.++||+|+||+||+|++.. + ..||||++... .....++|.+|+++|++++|||||+++|+|.+++..++|
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv 105 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII 105 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 567788999999999999999642 2 36899998754 334556899999999999999999999999999999999
Q ss_pred EeccCCCChhhhh---------------------------------------------------ccccceeEecCCCccc
Q 004345 570 YEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 570 ~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||||++|+|.+++ +|||+|+.+.......
T Consensus 106 ~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~ 185 (299)
T d1jpaa_ 106 TEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 185 (299)
T ss_dssp EECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred EEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcc
Confidence 9999999998762 4999999775433221
Q ss_pred ---ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 599 ---ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 599 ---~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
......||+.|||||.+..+.++.++|||||||+||||+| |+.||...... .+...+. .+..
T Consensus 186 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~---~~~~~i~----~~~~------- 251 (299)
T d1jpaa_ 186 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ---DVINAIE----QDYR------- 251 (299)
T ss_dssp ----------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHHHH----TTCC-------
T ss_pred eeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH---HHHHHHH----cCCC-------
Confidence 1223467899999999999999999999999999999998 89998643221 1111111 1110
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
...+......+.+++.+||+.||++||||.||+++|+++++
T Consensus 252 --~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~ 292 (299)
T d1jpaa_ 252 --LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292 (299)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 01111223567789999999999999999999999988764
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4e-36 Score=314.18 Aligned_cols=211 Identities=27% Similarity=0.403 Sum_probs=164.9
Q ss_pred HHHhccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 490 LANATNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 490 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
++...++|++.++||+|+||+||+|++. +++.||||+++.. ....++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 12 wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (287)
T d1opja_ 12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90 (287)
T ss_dssp TBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred cEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEE
Confidence 3445678999999999999999999975 5889999999754 3456789999999999999999999999999999999
Q ss_pred EEeccCCCChhhhh----------------------------------------------------ccccceeEecCCCc
Q 004345 569 IYEYMPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 569 V~Ey~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~ 596 (760)
||||+++|+|..+| +|||+|+.......
T Consensus 91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~ 170 (287)
T d1opja_ 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 170 (287)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSS
T ss_pred EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCc
Confidence 99999999998763 49999987654332
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......|++.|||||++....++.|+|||||||++|||++|..|+....... .+ ......+..
T Consensus 171 -~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~--~~----~~~i~~~~~--------- 234 (287)
T d1opja_ 171 -TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QV----YELLEKDYR--------- 234 (287)
T ss_dssp -EEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HH----HHHHHTTCC---------
T ss_pred -eeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHH--HH----HHHHhcCCC---------
Confidence 22334568999999999999999999999999999999999877764322211 11 111111111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
...+......+.+++.+||+.||++||||.||+++|+.+.+
T Consensus 235 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~ 275 (287)
T d1opja_ 235 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275 (287)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11111223467889999999999999999999999987754
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.9e-36 Score=310.72 Aligned_cols=214 Identities=29% Similarity=0.397 Sum_probs=159.1
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
.++|++.+.||+|+||.||+|++++++.||||+++.. ....+.|.+|+.++++++|||||+++|+|. .+..++||||+
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~ 93 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 93 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEec
Confidence 4679999999999999999999988889999999654 445678999999999999999999999985 45689999999
Q ss_pred CCCChhhhh----------------------------------------------------ccccceeEecCCCcccccc
Q 004345 574 PNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 574 ~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++|+|..++ +|||+|+.+..... ....
T Consensus 94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~ 172 (285)
T d1fmka3 94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQ 172 (285)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCc-eeec
Confidence 999987762 49999987643332 2233
Q ss_pred eeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 602 RLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
...||+.|+|||++....++.++|||||||++|||++|..|+...... ......+. .+.. .....
T Consensus 173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~--~~~~~~i~----~~~~-----~~~~~---- 237 (285)
T d1fmka3 173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVE----RGYR-----MPCPP---- 237 (285)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHH----TTCC-----CCCCT----
T ss_pred cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH--HHHHHHHH----hcCC-----CCCCc----
Confidence 457899999999999999999999999999999999987765432221 11111111 1110 11111
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccCCCCCCCC
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKDLPAAKQP 725 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~~p~~p 725 (760)
...+++.+++.+||+.||++||||++|+++|++.....+++.+|
T Consensus 238 ~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~~~p 281 (285)
T d1fmka3 238 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 281 (285)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCC
T ss_pred ccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCCCCCC
Confidence 12246778999999999999999999999999877665544444
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-34 Score=300.82 Aligned_cols=200 Identities=22% Similarity=0.355 Sum_probs=159.3
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
++|++.++||+|+||.||+|+. .+++.||||+++.......+.+.+|+.+|++++|||||++++++.+++..+|||||+
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~ 99 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence 5799999999999999999995 578999999998666566778999999999999999999999999999999999999
Q ss_pred CCCChhhhh-------------------------------------------------ccccceeEecCCCcccccceee
Q 004345 574 PNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQAATKRLV 604 (760)
Q Consensus 574 ~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 604 (760)
++|+|.+++ +|||+|+.+..... .....+
T Consensus 100 ~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~--~~~~~~ 177 (293)
T d1yhwa1 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMV 177 (293)
T ss_dssp TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--CBCCCC
T ss_pred CCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccc--cccccc
Confidence 999998762 49999998753322 234568
Q ss_pred eeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHHH
Q 004345 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEI 684 (760)
Q Consensus 605 gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 684 (760)
||+.|||||++.+..++.++|||||||++|||++|+.||....... . .......+. ... ..+....
T Consensus 178 gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~---~~~~~~~~~-~~~-------~~~~~~s 243 (293)
T d1yhwa1 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR---A---LYLIATNGT-PEL-------QNPEKLS 243 (293)
T ss_dssp SCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---H---HHHHHHHCS-CCC-------SSGGGSC
T ss_pred cCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH---H---HHHHHhCCC-CCC-------CCcccCC
Confidence 9999999999999999999999999999999999999986332211 1 111111110 000 0011112
Q ss_pred HHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 685 IRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 685 ~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~li~~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 244 AIFRDFLNRCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 45778899999999999999999975
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-35 Score=303.34 Aligned_cols=202 Identities=23% Similarity=0.349 Sum_probs=154.6
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.++||+|+||.||+|+. .+++.||||+++... .+..+.|.+|+++|++++|||||++++++.+++..+|||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 5799999999999999999996 468999999997543 33456799999999999999999999999999999999999
Q ss_pred cCCCChhhhh--------------------------------------------------ccccceeEecCCCcccccce
Q 004345 573 MPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 573 ~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
+++|+|.++| +|||+|+.+...........
T Consensus 85 ~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~ 164 (271)
T d1nvra_ 85 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164 (271)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCC
T ss_pred cCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccc
Confidence 9999998874 49999998754443444456
Q ss_pred eeeeccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCH
Q 004345 603 LVGTYGYMSPEYAMEGRF-SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFK 681 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~~-s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 681 (760)
.+||+.|||||++.+..+ +.++||||+||++|||++|+.||........ ..... ....... .+ ..
T Consensus 165 ~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~-~~~~~-----~~~~~~~--~~------~~ 230 (271)
T d1nvra_ 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDW-----KEKKTYL--NP------WK 230 (271)
T ss_dssp CCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSH-HHHHH-----HTTCTTS--TT------GG
T ss_pred eeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHH-HHHHH-----hcCCCCC--Cc------cc
Confidence 789999999999988776 5789999999999999999999964332211 11110 0110000 00 00
Q ss_pred HHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 682 MEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 682 ~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.....+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~s~~~~~li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 231 KIDSAPLALLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11245667889999999999999999865
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-35 Score=306.72 Aligned_cols=208 Identities=26% Similarity=0.422 Sum_probs=152.0
Q ss_pred cccccccccccCCceeEEEEEecCC-----cEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDG-----QEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~-----~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
+.|++.++||+|+||.||+|.++.. ..||||+++... .....+|++|+.++++++|||||+++|+|.+.+..++
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~ 86 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 86 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence 4678889999999999999996532 469999997543 3345679999999999999999999999999999999
Q ss_pred EEeccCCCChhhh---------------------------------------------------hccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
|||||.++++.++ |+|||+++.+......
T Consensus 87 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~ 166 (283)
T d1mqba_ 87 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 166 (283)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred EEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCcc
Confidence 9999999998765 2499999976543322
Q ss_pred -cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 -AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 -~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......||+.|||||++..+.++.++|||||||++|||++|..|+....... .+.. ...++. .
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~--~~~~----~i~~~~---------~ 231 (283)
T d1mqba_ 167 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMK----AINDGF---------R 231 (283)
T ss_dssp -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHH----HHHTTC---------C
T ss_pred ceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHH--HHHH----HHhccC---------C
Confidence 22334568999999999999999999999999999999999777654322211 1111 111111 1
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
...+......+.+|+.+||+.||++||||.||+++|+++++
T Consensus 232 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~ 272 (283)
T d1mqba_ 232 LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 272 (283)
T ss_dssp CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence 11111223567889999999999999999999999988764
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-35 Score=303.12 Aligned_cols=206 Identities=27% Similarity=0.421 Sum_probs=158.4
Q ss_pred cccccccc-ccccCCceeEEEEEec---CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 494 TNNFQLAN-KLGQGGFGPVYKGKLQ---DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 494 ~~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
.++|.+.+ +||+|+||.||+|.++ ++..||||+++... ....++|.+|+++|++++|||||+++|+|.. +..+|
T Consensus 7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~l 85 (285)
T d1u59a_ 7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 85 (285)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEE
Confidence 35667777 4999999999999864 35579999997543 3446789999999999999999999999865 56899
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
|||||++|+|.+++ +|||+|+.+......
T Consensus 86 vmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 165 (285)
T d1u59a_ 86 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 165 (285)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccc
Confidence 99999999998863 499999987644322
Q ss_pred -cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 598 -AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 598 -~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
.......||+.|||||++....++.|+|||||||++|||+| |+.||...... .+.. ....+...+.
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~---~~~~----~i~~~~~~~~----- 233 (285)
T d1u59a_ 166 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMA----FIEQGKRMEC----- 233 (285)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHH----HHHTTCCCCC-----
T ss_pred cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCCCC-----
Confidence 22334578999999999999999999999999999999998 89998643221 1111 1122221111
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.. .....+.+++.+||+.||++||||.+|++.|+...
T Consensus 234 p~----~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 234 PP----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp CT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC----cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 11 12246778999999999999999999999997653
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-34 Score=301.32 Aligned_cols=198 Identities=28% Similarity=0.392 Sum_probs=149.4
Q ss_pred cccccCCceeEEEEEec---CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEeccCC
Q 004345 501 NKLGQGGFGPVYKGKLQ---DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYMPN 575 (760)
Q Consensus 501 ~~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 575 (760)
++||+|+||.||+|.++ .++.||||+++... ....++|.+|+++|++++|||||+++|+|.. +..+|||||+++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 57999999999999864 34689999997532 2345689999999999999999999999864 567899999999
Q ss_pred CChhhhh--------------------------------------------------ccccceeEecCCCcc-cccceee
Q 004345 576 KSLDSFL--------------------------------------------------FDFGLARIFGGNQDQ-AATKRLV 604 (760)
Q Consensus 576 gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~-~~~~~~~ 604 (760)
|+|.+++ +|||+++.+...... .......
T Consensus 92 g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~ 171 (277)
T d1xbba_ 92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171 (277)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----C
T ss_pred CcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccC
Confidence 9998873 499999987544332 2233457
Q ss_pred eeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCCHHH
Q 004345 605 GTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKME 683 (760)
Q Consensus 605 gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 683 (760)
||+.|||||.+....++.++|||||||++|||+| |+.||...... .+.. ....+.... . +...
T Consensus 172 gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~---~~~~----~i~~~~~~~-----~----p~~~ 235 (277)
T d1xbba_ 172 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EVTA----MLEKGERMG-----C----PAGC 235 (277)
T ss_dssp CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH----HHHTTCCCC-----C----CTTC
T ss_pred CCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH---HHHH----HHHcCCCCC-----C----Cccc
Confidence 8999999999999999999999999999999998 89998643221 1111 111221111 1 1112
Q ss_pred HHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 684 IIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 684 ~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
...+.+++.+||+.||++||||++|+++|+..
T Consensus 236 ~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 236 PREMYDLMNLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence 24677899999999999999999999998764
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.1e-35 Score=307.18 Aligned_cols=213 Identities=27% Similarity=0.430 Sum_probs=165.4
Q ss_pred HHHHHhccccccccccccCCceeEEEEEec------CCcEEEEEEecccCc-cchHhHHHHHHHHhcCCCCccceeeeEE
Q 004345 488 EELANATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKASG-QGQEEFMNEVMVISNLQHRNLVRLLGCC 560 (760)
Q Consensus 488 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~ 560 (760)
.+++.+.++|++.+.||+|+||.||+|+.+ +++.||||+++.... +..++|.+|+++|++++||||++++++|
T Consensus 6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~ 85 (301)
T d1lufa_ 6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 85 (301)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence 345557789999999999999999999853 457899999975433 3456799999999999999999999999
Q ss_pred EeCCeeEEEEeccCCCChhhhh----------------------------------------------------------
Q 004345 561 VEREENMLIYEYMPNKSLDSFL---------------------------------------------------------- 582 (760)
Q Consensus 561 ~~~~~~~lV~Ey~~~gsL~~~L---------------------------------------------------------- 582 (760)
...+..++||||+++|+|.++|
T Consensus 86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD 165 (301)
T d1lufa_ 86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD 165 (301)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence 9999999999999999998763
Q ss_pred ----------------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCC-CCCC
Q 004345 583 ----------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK-NTSF 645 (760)
Q Consensus 583 ----------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~-p~~~ 645 (760)
+|||+|+.+.............||+.|||||.+....++.|+|||||||++|||++|.. |+..
T Consensus 166 lKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~ 245 (301)
T d1lufa_ 166 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 245 (301)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred EcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCC
Confidence 39999987654443344445678999999999999999999999999999999999965 5543
Q ss_pred CcccccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 646 YHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.... .+.. ...++...+. .. ....++.+|+.+||+.||++||||.||+++|+++.
T Consensus 246 ~~~~---e~~~----~v~~~~~~~~-----p~----~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 246 MAHE---EVIY----YVRDGNILAC-----PE----NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp SCHH---HHHH----HHHTTCCCCC-----CT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CCHH---HHHH----HHHcCCCCCC-----Cc----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 2221 1111 1222222111 11 12246788999999999999999999999998874
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-34 Score=302.73 Aligned_cols=199 Identities=23% Similarity=0.291 Sum_probs=153.9
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+|+. .+++.||||++++. .....+.+.+|+++|++++|||||++++++.+++..+|||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 5699999999999999999996 47899999999743 2345578999999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++|+|.+++ +|||+|+.+.........
T Consensus 88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~ 167 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 167 (288)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCccccc
Confidence 999999998763 499999987544434444
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...+||+.|||||++.+..++.++|||||||++|||++|+.||...... .+. ... ..+.. .+....
T Consensus 168 ~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~---~~~---~~i-~~~~~------~~p~~~- 233 (288)
T d1uu3a_ 168 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEY---LIF---QKI-IKLEY------DFPEKF- 233 (288)
T ss_dssp --CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH---HHH-HTTCC------CCCTTC-
T ss_pred ccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHH---HHH---HHH-HcCCC------CCCccC-
Confidence 4578999999999999999999999999999999999999998643211 111 111 11111 111111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
...+.+++.+||+.||++|||++|+++
T Consensus 234 ---s~~~~~li~~~L~~dP~~R~t~~e~~~ 260 (288)
T d1uu3a_ 234 ---FPKARDLVEKLLVLDATKRLGCEEMEG 260 (288)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred ---CHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence 245778899999999999999998743
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-34 Score=298.17 Aligned_cols=200 Identities=21% Similarity=0.318 Sum_probs=156.6
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
+.|++.+.||+|+||.||+|+. .+++.||||+++.......+.|.+|+++|++++|||||++++++.+++..+||||||
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~ 91 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 91 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence 4689999999999999999996 468899999998766677789999999999999999999999999999999999999
Q ss_pred CCCChhhhh---------------------------------------------------ccccceeEecCCCcccccce
Q 004345 574 PNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 574 ~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~~~~ 602 (760)
++|+|.+++ +|||+|+..... ......
T Consensus 92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~--~~~~~~ 169 (288)
T d2jfla1 92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--IQRRDS 169 (288)
T ss_dssp TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH--HHHHTC
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCC--cccccc
Confidence 999998763 499999875322 122335
Q ss_pred eeeeccccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 603 LVGTYGYMSPEYAM-----EGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 603 ~~gt~~y~aPE~~~-----~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
..||+.|||||++. ...|+.|+|||||||++|||++|+.||....... ...... .. ... .+.
T Consensus 170 ~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~---~~~~i~---~~-~~~-----~~~- 236 (288)
T d2jfla1 170 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR---VLLKIA---KS-EPP-----TLA- 236 (288)
T ss_dssp CCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG---HHHHHH---HS-CCC-----CCS-
T ss_pred cccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH---HHHHHH---cC-CCC-----CCC-
Confidence 68999999999984 4568999999999999999999999986433221 111111 11 100 000
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+......+.+++.+||+.||++|||+.|+++
T Consensus 237 -~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 237 -QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp -SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -ccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 01111245778889999999999999999876
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-34 Score=306.47 Aligned_cols=207 Identities=29% Similarity=0.417 Sum_probs=159.3
Q ss_pred HhccccccccccccCCceeEEEEEecC------CcEEEEEEeccc-CccchHhHHHHHHHHhcC-CCCccceeeeEEEeC
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQD------GQEIAVKRLSKA-SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVER 563 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~ 563 (760)
...++|++.++||+|+||+||+|+... ...||||++... .......|.+|+.+|.++ +|||||+++|++.+.
T Consensus 34 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~ 113 (325)
T d1rjba_ 34 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 113 (325)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeC
Confidence 455789999999999999999998642 236999998654 344567899999999998 899999999999999
Q ss_pred CeeEEEEeccCCCChhhhh-------------------------------------------------------------
Q 004345 564 EENMLIYEYMPNKSLDSFL------------------------------------------------------------- 582 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L------------------------------------------------------------- 582 (760)
+..+||||||++|+|.++|
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~ 193 (325)
T d1rjba_ 114 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 193 (325)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred CeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchh
Confidence 9999999999999997653
Q ss_pred ------------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCccc
Q 004345 583 ------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEE 649 (760)
Q Consensus 583 ------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~ 649 (760)
+|||+|+...............||+.|||||++..+.++.++|||||||+||||+| |+.||......
T Consensus 194 Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~ 273 (325)
T d1rjba_ 194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 273 (325)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred ccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH
Confidence 39999987655444434445678999999999999999999999999999999998 89998643322
Q ss_pred ccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHh
Q 004345 650 FELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLN 713 (760)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~ 713 (760)
. .+. +....+.. + ..+......+.+++.+||+.||++||||+||+++|.
T Consensus 274 ~--~~~----~~~~~~~~-----~----~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 274 A--NFY----KLIQNGFK-----M----DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp H--HHH----HHHHTTCC-----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred H--HHH----HHHhcCCC-----C----CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 1 111 11111110 0 111112346788999999999999999999999995
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-34 Score=293.47 Aligned_cols=195 Identities=25% Similarity=0.340 Sum_probs=155.5
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||.||+|+.. +++.||||++.+. .....+.+.+|++++++++|||||++++++.+++..+|||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 47999999999999999999964 6889999998643 2345678999999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+++|+|.++| +|||+|+..... ..
T Consensus 86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~----~~ 161 (263)
T d2j4za1 86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RR 161 (263)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC----CC
T ss_pred eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCC----cc
Confidence 999999998763 499999865432 23
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....||+.|||||++.+..++.++|||||||+||||++|+.||...... .... ...... ..+...
T Consensus 162 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~---~~~~----~i~~~~------~~~p~~-- 226 (263)
T d2j4za1 162 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ---ETYK----RISRVE------FTFPDF-- 226 (263)
T ss_dssp EETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH----HHHTTC------CCCCTT--
T ss_pred cccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHH---HHHH----HHHcCC------CCCCcc--
Confidence 3467999999999999999999999999999999999999998633221 1111 111111 011111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..+.+.+++.+||+.||++|||+.|+++
T Consensus 227 --~s~~~~~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 227 --VTEGARDLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence 1245677889999999999999999986
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-34 Score=298.59 Aligned_cols=198 Identities=25% Similarity=0.382 Sum_probs=148.7
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEe--CCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVE--REENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~--~~~~~lV 569 (760)
++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.|.+|+++|++++|||||++++++.+ .+..+||
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 6799999999999999999986 478999999997543 3345679999999999999999999999975 4567999
Q ss_pred EeccCCCChhhhh-----------------------------------------------------------ccccceeE
Q 004345 570 YEYMPNKSLDSFL-----------------------------------------------------------FDFGLARI 590 (760)
Q Consensus 570 ~Ey~~~gsL~~~L-----------------------------------------------------------~DFGla~~ 590 (760)
|||+++|+|.++| +|||+|+.
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 9999999998753 39999987
Q ss_pred ecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccc
Q 004345 591 FGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDL 670 (760)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (760)
+.... .......||+.|||||++....++.++|||||||++|||+||+.||...... .+... ...+....
T Consensus 164 ~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~---~~~~~----i~~~~~~~- 233 (269)
T d2java1 164 LNHDT--SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK---ELAGK----IREGKFRR- 233 (269)
T ss_dssp C-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHH----HHHTCCCC-
T ss_pred cccCC--CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH---HHHHH----HHcCCCCC-
Confidence 64322 2233568999999999999999999999999999999999999998643221 11111 11111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 671 VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 671 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
+.... ...+.+++.+||+.||++|||+.|+++
T Consensus 234 ----~~~~~----s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 234 ----IPYRY----SDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp ----CCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----CCccc----CHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 11111 235778889999999999999999875
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-34 Score=293.12 Aligned_cols=198 Identities=29% Similarity=0.399 Sum_probs=148.1
Q ss_pred ccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeC-CeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER-EENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~-~~~~lV~Ey 572 (760)
.++|++.++||+|+||.||+|+++ ++.||||+++.. ...++|.+|++++++++|||||+++|+|.+. +..++||||
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey 82 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 82 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred HHHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence 456888999999999999999985 788999999653 4457899999999999999999999999654 568999999
Q ss_pred cCCCChhhhh----------------------------------------------------ccccceeEecCCCccccc
Q 004345 573 MPNKSLDSFL----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 573 ~~~gsL~~~L----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
+++|+|.++| +|||+++..... .
T Consensus 83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~-----~ 157 (262)
T d1byga_ 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----Q 157 (262)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCC-----C
Confidence 9999999874 399999865322 2
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
....+|..|||||++.+..++.++|||||||++|||+| |+.|+...... .+...+. .+... .+..
T Consensus 158 ~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~---~~~~~i~----~~~~~-----~~~~-- 223 (262)
T d1byga_ 158 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPRVE----KGYKM-----DAPD-- 223 (262)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHHHHHT----TTCCC-----CCCT--
T ss_pred ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH---HHHHHHH----cCCCC-----CCCc--
Confidence 23467899999999999999999999999999999998 67666533221 2222221 11111 1111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
....++.+++.+||+.||.+||||.+|+++|+++
T Consensus 224 --~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i 257 (262)
T d1byga_ 224 --GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 257 (262)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --cCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 1224677889999999999999999999999875
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-34 Score=303.15 Aligned_cols=212 Identities=28% Similarity=0.407 Sum_probs=165.0
Q ss_pred HHHHhccccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEE
Q 004345 489 ELANATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCV 561 (760)
Q Consensus 489 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~ 561 (760)
+++...++|++.++||+|+||.||+|.+. +++.||||+++... .+....|.+|+.++++++|||||+++|+|.
T Consensus 14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~ 93 (308)
T d1p4oa_ 14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 93 (308)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe
Confidence 44455678999999999999999999863 35789999997543 334457999999999999999999999999
Q ss_pred eCCeeEEEEeccCCCChhhhh-----------------------------------------------------------
Q 004345 562 EREENMLIYEYMPNKSLDSFL----------------------------------------------------------- 582 (760)
Q Consensus 562 ~~~~~~lV~Ey~~~gsL~~~L----------------------------------------------------------- 582 (760)
.++..++||||+++|+|.+++
T Consensus 94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~K 173 (308)
T d1p4oa_ 94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 173 (308)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEE
T ss_pred cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEE
Confidence 999999999999999998762
Q ss_pred -ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCC-CCCCCCcccccccHHHHHHH
Q 004345 583 -FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGR-KNTSFYHEEFELTLLGYAWK 660 (760)
Q Consensus 583 -~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~-~p~~~~~~~~~~~~~~~~~~ 660 (760)
+|||+|+.+.............||+.|||||.+.+..++.++||||||+++|||+||+ .|+...... ....
T Consensus 174 l~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~------~~~~- 246 (308)
T d1p4oa_ 174 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------QVLR- 246 (308)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH------HHHH-
T ss_pred EeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHH------HHHH-
Confidence 3999998765444444445567999999999999999999999999999999999986 455422111 1111
Q ss_pred hccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 661 LWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 661 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
....+...+. .. .....+.+++.+||+.||++||||.+|+++|++.+
T Consensus 247 ~i~~~~~~~~-----p~----~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~ 293 (308)
T d1p4oa_ 247 FVMEGGLLDK-----PD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 293 (308)
T ss_dssp HHHTTCCCCC-----CT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred HHHhCCCCCC-----cc----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 1112221111 11 12246888999999999999999999999998875
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-34 Score=304.24 Aligned_cols=150 Identities=27% Similarity=0.392 Sum_probs=129.8
Q ss_pred hccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
..++|++.++||+|+||+||+|+. .+++.||+|+++... ....+.+.+|+.+|++++|||||+++++|.++++.+|||
T Consensus 4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm 83 (322)
T d1s9ja_ 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 83 (322)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 357899999999999999999996 478999999997543 344568999999999999999999999999999999999
Q ss_pred eccCCCChhhhh---------------------------------------------------ccccceeEecCCCcccc
Q 004345 571 EYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 571 Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|||++|+|.++| +|||+|+.+.. ..
T Consensus 84 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~----~~ 159 (322)
T d1s9ja_ 84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SM 159 (322)
T ss_dssp ECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH----HT
T ss_pred EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCC----Cc
Confidence 999999998863 49999986532 12
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFY 646 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~ 646 (760)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||...
T Consensus 160 ~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~ 206 (322)
T d1s9ja_ 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206 (322)
T ss_dssp C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCC
T ss_pred cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 33568999999999999999999999999999999999999999643
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-33 Score=287.51 Aligned_cols=194 Identities=23% Similarity=0.387 Sum_probs=147.3
Q ss_pred ccccccccCCceeEEEEEec-CCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEe----CCeeEEEE
Q 004345 498 QLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE----REENMLIY 570 (760)
Q Consensus 498 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~----~~~~~lV~ 570 (760)
++.++||+|+||+||+|+.. +++.||+|++... .....+.|.+|+++|++++|||||++++++.. +...+|||
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm 91 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 91 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence 56678999999999999964 6889999998754 23345679999999999999999999999875 34579999
Q ss_pred eccCCCChhhhh-----------------------------------------------------ccccceeEecCCCcc
Q 004345 571 EYMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 571 Ey~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
||+++|+|.++| +|||+|+....
T Consensus 92 E~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~---- 167 (270)
T d1t4ha_ 92 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---- 167 (270)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT----
T ss_pred eCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC----
Confidence 999999998873 49999975432
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
......+||+.|||||++.+ .++.++|||||||++|||++|+.||....... . ..+....+.... .+..
T Consensus 168 ~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~--~----~~~~i~~~~~~~----~~~~ 236 (270)
T d1t4ha_ 168 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA--Q----IYRRVTSGVKPA----SFDK 236 (270)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH--H----HHHHHTTTCCCG----GGGG
T ss_pred CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHH--H----HHHHHHcCCCCc----ccCc
Confidence 22335689999999998864 69999999999999999999999986332211 1 111111111111 1111
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.. ...+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~----~~~~~~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 237 VA----IPEVKEIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp CC----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cC----CHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence 11 234678899999999999999999976
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-34 Score=303.06 Aligned_cols=214 Identities=25% Similarity=0.374 Sum_probs=164.4
Q ss_pred HHhccccccccccccCCceeEEEEEe------cCCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCccceeeeEEEe
Q 004345 491 ANATNNFQLANKLGQGGFGPVYKGKL------QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRLLGCCVE 562 (760)
Q Consensus 491 ~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~ 562 (760)
+...++|++.++||+|+||.||+|++ .+++.||||+++... .....+|.+|+.+++++ +|||||+++|+|.+
T Consensus 19 ~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~ 98 (311)
T d1t46a_ 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (311)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEee
Confidence 34557899999999999999999985 245789999997543 33456799999999999 69999999999999
Q ss_pred CCeeEEEEeccCCCChhhhh------------------------------------------------------------
Q 004345 563 REENMLIYEYMPNKSLDSFL------------------------------------------------------------ 582 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~L------------------------------------------------------------ 582 (760)
++..+||||||++|+|.++|
T Consensus 99 ~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~ 178 (311)
T d1t46a_ 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 178 (311)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccc
Confidence 99999999999999987763
Q ss_pred --------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccH
Q 004345 583 --------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTL 654 (760)
Q Consensus 583 --------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~ 654 (760)
+|||+++...............||+.|||||.+....++.++|||||||++|||+|+..|+........ .+
T Consensus 179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~-~~ 257 (311)
T d1t46a_ 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KF 257 (311)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-HH
T ss_pred cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHH-HH
Confidence 399999987655444445567899999999999999999999999999999999995555432221111 11
Q ss_pred HHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 655 LGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 655 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
.+....+ .....+......+.+|+.+||+.||++||||.||+++|++.+.+
T Consensus 258 ----~~~i~~~---------~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~ 308 (311)
T d1t46a_ 258 ----YKMIKEG---------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (311)
T ss_dssp ----HHHHHHT---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----HHHHhcC---------CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence 1111111 11111112235678899999999999999999999999886543
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-34 Score=295.89 Aligned_cols=206 Identities=23% Similarity=0.347 Sum_probs=147.9
Q ss_pred hccccccccccccCCceeEEEEEecC----CcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 493 ATNNFQLANKLGQGGFGPVYKGKLQD----GQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 493 ~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
..++|++.+.||+|+||.||+|++.. +..||||+++... ....+.|.+|+.+|++++|||||+++|++. ++..+
T Consensus 5 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 83 (273)
T d1mp8a_ 5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 83 (273)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred CHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEE
Confidence 35689999999999999999998642 3569999987543 334567999999999999999999999985 56789
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCc
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+||||+++|+|..++ +|||+|+.+.....
T Consensus 84 iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~ 163 (273)
T d1mp8a_ 84 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163 (273)
T ss_dssp EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCcc
Confidence 999999999998762 49999987643322
Q ss_pred ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCccccccccc
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLI 675 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 675 (760)
.......||+.|||||.+....++.++|||||||++|||++ |..|+...... .+...+. .+.... +
T Consensus 164 -~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~---~~~~~i~----~~~~~~-----~ 230 (273)
T d1mp8a_ 164 -YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGRIE----NGERLP-----M 230 (273)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHHHHH----TTCCCC-----C
T ss_pred -eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH---HHHHHHH----cCCCCC-----C
Confidence 23334678999999999999999999999999999999998 78888643322 1221111 111111 1
Q ss_pred cCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 676 SESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 676 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.. .....+.+++.+||+.||++|||+.||++.|+.++
T Consensus 231 ~~----~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~ 267 (273)
T d1mp8a_ 231 PP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 267 (273)
T ss_dssp CT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC----CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 11 12246778999999999999999999999998764
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.4e-33 Score=295.52 Aligned_cols=201 Identities=18% Similarity=0.250 Sum_probs=141.4
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
.+.|++.+.||+|+||+||+|+.. +++.||||++.+.. ....+.+.+|+.+|++++|||||++++++.+++..+||||
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE 87 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 87 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 366999999999999999999964 68999999997543 2344678899999999999999999999999999999999
Q ss_pred ccCCCChhhhh-----------------------------------------------------ccccceeEecCCCccc
Q 004345 572 YMPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQA 598 (760)
Q Consensus 572 y~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~ 598 (760)
||++|+|.++| +|||+|+......
T Consensus 88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~--- 164 (307)
T d1a06a_ 88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--- 164 (307)
T ss_dssp CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred ccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCC---
Confidence 99999998874 3999998764322
Q ss_pred ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCC
Q 004345 599 ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISES 678 (760)
Q Consensus 599 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 678 (760)
.....+||+.|||||++.+..++.++|||||||++|||++|+.||...... .+.... . .+.. . .+..
T Consensus 165 ~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~---~~~~~i---~-~~~~-~-~~~~---- 231 (307)
T d1a06a_ 165 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA---KLFEQI---L-KAEY-E-FDSP---- 231 (307)
T ss_dssp --------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHH---H-TTCC-C-CCTT----
T ss_pred eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH---HHHHHH---h-ccCC-C-CCCc----
Confidence 223468999999999999999999999999999999999999999633221 111111 1 1110 0 0000
Q ss_pred CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 679 GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 679 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....-...+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 232 YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 11111245778899999999999999999988
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-33 Score=299.12 Aligned_cols=205 Identities=25% Similarity=0.413 Sum_probs=151.8
Q ss_pred cccccccccccCCceeEEEEEec-CCc----EEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQ----EIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~l 568 (760)
.+|++.++||+|+||+||+|+.. +++ .||||+++.. ..+..++|.+|++++++++|||||+++|+|.++ ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 35899999999999999999864 343 5899998753 345677899999999999999999999999864 5678
Q ss_pred EEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCcc
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
++||+.+|+|.+++ +|||+|+.+......
T Consensus 88 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~ 167 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 167 (317)
T ss_dssp EEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC-
T ss_pred EEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccccccc
Confidence 89999999987752 499999987554444
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.......||+.|||||.+..+.++.++|||||||+||||+| |+.||....... +...+.. +..
T Consensus 168 ~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~---~~~~i~~----~~~--------- 231 (317)
T d1xkka_ 168 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEK----GER--------- 231 (317)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG---HHHHHHH----TCC---------
T ss_pred ccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH---HHHHHHc----CCC---------
Confidence 44445678999999999999999999999999999999999 778876432221 1111111 110
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
...+......+.+++.+||+.||++|||+.||++.|+...
T Consensus 232 ~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~ 271 (317)
T d1xkka_ 232 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 271 (317)
T ss_dssp CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence 0111122356778999999999999999999999987754
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=99.98 E-value=6.5e-33 Score=297.35 Aligned_cols=201 Identities=23% Similarity=0.274 Sum_probs=159.4
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
++|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|+.+|++++|||||++++++.+++..+||||||
T Consensus 26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 105 (350)
T d1koaa2 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 105 (350)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 5899999999999999999996 478999999998765556678999999999999999999999999999999999999
Q ss_pred CCCChhhhh-----------------------------------------------------ccccceeEecCCCccccc
Q 004345 574 PNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 574 ~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
++|+|.++| +|||+|+.+.... ..
T Consensus 106 ~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~---~~ 182 (350)
T d1koaa2 106 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SV 182 (350)
T ss_dssp CSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS---CE
T ss_pred CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheeccccc---cc
Confidence 999998763 3999999875332 23
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....||+.|||||++.+..++.++|||||||++|||++|+.||...... ......... .... +.....
T Consensus 183 ~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~---~~~~~i~~~--~~~~----~~~~~~--- 250 (350)
T d1koaa2 183 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD---ETLRNVKSC--DWNM----DDSAFS--- 250 (350)
T ss_dssp EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHT--CCCS----CCGGGG---
T ss_pred ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHH---HHHHHHHhC--CCCC----Cccccc---
Confidence 3468999999999999999999999999999999999999998633221 111111110 0000 000001
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 251 -~~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 251 -GISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp -GCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred -CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 112457788899999999999999999884
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=7.5e-33 Score=290.40 Aligned_cols=200 Identities=22% Similarity=0.306 Sum_probs=156.1
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccC------ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS------GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~------~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
++|++.+.||+|+||.||+|+. .+++.||||++++.. ....+.|.+|+.+|++++|||||++++++.+++..+
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 89 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 5799999999999999999996 478999999996432 123568999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhh------------------------------------------------------ccccceeEecC
Q 004345 568 LIYEYMPNKSLDSFL------------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L------------------------------------------------------~DFGla~~~~~ 593 (760)
||||||++|+|.++| +|||+|+....
T Consensus 90 iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~ 169 (293)
T d1jksa_ 90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 169 (293)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTT
T ss_pred EEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCC
Confidence 999999999998874 39999988743
Q ss_pred CCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
... .....||+.|||||++....++.++|||||||++|||++|+.||....... ..... ..... .. .+
T Consensus 170 ~~~---~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~---~~~~i----~~~~~-~~-~~ 237 (293)
T d1jksa_ 170 GNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TLANV----SAVNY-EF-ED 237 (293)
T ss_dssp SCB---CSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHH----HTTCC-CC-CH
T ss_pred Ccc---ccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH---HHHHH----HhcCC-CC-Cc
Confidence 322 234578999999999999999999999999999999999999986432211 11111 11110 00 00
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..... ....+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~----~s~~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 238 EYFSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp HHHTT----SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhcCC----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00011 1245678899999999999999999986
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.9e-33 Score=291.55 Aligned_cols=205 Identities=28% Similarity=0.426 Sum_probs=147.2
Q ss_pred cccccccccccCCceeEEEEEec--CC--cEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ--DG--QEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
++|++.+.||+|+||.||+|+.. ++ ..||||++++. ..+..++|.+|+.+|++++|||||+++|+|.+ +..+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~ 86 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK 86 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence 56899999999999999999853 22 37899998754 23345689999999999999999999999965 5678
Q ss_pred EEEeccCCCChhhhh---------------------------------------------------ccccceeEecCCCc
Q 004345 568 LIYEYMPNKSLDSFL---------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+||||+++|+|.+++ +|||+++.+.....
T Consensus 87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~ 166 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 166 (273)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC
T ss_pred eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCC
Confidence 999999999988752 49999998755433
Q ss_pred cc-ccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 597 QA-ATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 597 ~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
.. ......|+..|+|||.+....++.++|||||||++|||+| |+.||...... .. .......+...+.
T Consensus 167 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~---~~---~~~i~~~~~~~~~---- 236 (273)
T d1u46a_ 167 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS---QI---LHKIDKEGERLPR---- 236 (273)
T ss_dssp EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HH---HHHHHTSCCCCCC----
T ss_pred cceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH---HH---HHHHHhCCCCCCC----
Confidence 32 3334567889999999999999999999999999999998 89998633221 11 1222222211111
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcc
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSE 715 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 715 (760)
.... ...+.+++.+||+.||++||||.||+++|++.
T Consensus 237 -~~~~----~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 237 -PEDC----PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp -CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -cccc----cHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1111 24577899999999999999999999999764
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=5.5e-33 Score=293.49 Aligned_cols=203 Identities=27% Similarity=0.428 Sum_probs=153.8
Q ss_pred ccccccCCceeEEEEEecCC----cEEEEEEeccc-CccchHhHHHHHHHHhcCCCCccceeeeEEEeC-CeeEEEEecc
Q 004345 500 ANKLGQGGFGPVYKGKLQDG----QEIAVKRLSKA-SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVER-EENMLIYEYM 573 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~~~~----~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~-~~~~lV~Ey~ 573 (760)
.++||+|+||+||+|++.+. ..||||++++. .....++|.+|+++|++++|||||+++|+|.+. +..++|||||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~ 111 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence 47899999999999996432 36999999753 344567899999999999999999999998764 5789999999
Q ss_pred CCCChhhhh---------------------------------------------------ccccceeEecCCCcc--ccc
Q 004345 574 PNKSLDSFL---------------------------------------------------FDFGLARIFGGNQDQ--AAT 600 (760)
Q Consensus 574 ~~gsL~~~L---------------------------------------------------~DFGla~~~~~~~~~--~~~ 600 (760)
++|+|.+++ +|||+++........ ...
T Consensus 112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~ 191 (311)
T d1r0pa_ 112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 191 (311)
T ss_dssp TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCT
T ss_pred ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceec
Confidence 999998762 499999876543322 223
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....||+.|+|||.+....++.|+||||||+++|||+||+.|+...... ......+. .+... ..+ .
T Consensus 192 ~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~--~~~~~~i~----~g~~~--~~p---~--- 257 (311)
T d1r0pa_ 192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYLL----QGRRL--LQP---E--- 257 (311)
T ss_dssp TCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------CHHHHH----TTCCC--CCC---T---
T ss_pred ccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH--HHHHHHHH----cCCCC--CCc---c---
Confidence 3457899999999999999999999999999999999988887532221 11112111 11110 111 1
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhcccc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIK 717 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~ 717 (760)
.....+.+++.+||+.||++||+|.||++.|+++.+
T Consensus 258 -~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~ 293 (311)
T d1r0pa_ 258 -YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 293 (311)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -cCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 112457789999999999999999999999998864
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=99.98 E-value=1.1e-32 Score=295.81 Aligned_cols=205 Identities=20% Similarity=0.267 Sum_probs=160.9
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
++|++.++||+|+||.||+|+. .+++.||||+++.......+.+.+|+++|++++|||||++++++.+++..+||||||
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 108 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 108 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 5799999999999999999996 578999999998665555678999999999999999999999999999999999999
Q ss_pred CCCChhhhh-----------------------------------------------------ccccceeEecCCCccccc
Q 004345 574 PNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 574 ~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
++|+|.+++ +|||+|+.+.... ..
T Consensus 109 ~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~---~~ 185 (352)
T d1koba_ 109 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---IV 185 (352)
T ss_dssp CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS---CE
T ss_pred CCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCC---ce
Confidence 999997652 4999999875432 23
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....||+.|||||++.+..++.++||||+||++|||+||+.||...... ........ +.. .......
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---~~~~~i~~----~~~------~~~~~~~ 252 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL---ETLQNVKR----CDW------EFDEDAF 252 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHHHHHH----CCC------CCCSSTT
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHh----CCC------CCCcccc
Confidence 3467999999999999999999999999999999999999999643221 11111111 100 0001111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCCCHHHHHHH--Hhcc
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM--LNSE 715 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~--L~~~ 715 (760)
......+.+++.+||+.||.+|||+.|+++. +++.
T Consensus 253 ~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~ 289 (352)
T d1koba_ 253 SSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 289 (352)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred cCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence 1122457788999999999999999999873 5443
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.98 E-value=2e-33 Score=296.35 Aligned_cols=195 Identities=24% Similarity=0.434 Sum_probs=151.2
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
+.|+..++||+|+||.||+|+. .+++.||||+++.... ...+.|.+|+++|++++|||||++++++.+++..+|||
T Consensus 15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~ 94 (309)
T d1u5ra_ 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (309)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence 4589999999999999999995 5788999999975432 33457999999999999999999999999999999999
Q ss_pred eccCCCChhhh--------------------------------------------------hccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~ 600 (760)
|||++|+|..+ |+|||+|+.... .
T Consensus 95 E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~------~ 168 (309)
T d1u5ra_ 95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------A 168 (309)
T ss_dssp ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS------B
T ss_pred EecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC------C
Confidence 99999998754 249999986432 2
Q ss_pred ceeeeeccccCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccC
Q 004345 601 KRLVGTYGYMSPEYAME---GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISE 677 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~---~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 677 (760)
....||+.|||||++.. ..|+.++|||||||++|||++|+.||...... ......... .. +.+..
T Consensus 169 ~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~------~~~~~i~~~-~~-----~~~~~ 236 (309)
T d1u5ra_ 169 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQN-ES-----PALQS 236 (309)
T ss_dssp CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHS-CC-----CCCSC
T ss_pred CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhC-CC-----CCCCC
Confidence 34579999999999863 46899999999999999999999998633221 111111111 11 11111
Q ss_pred CCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 678 SGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 678 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.. ..+.+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~---~s~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 237 GH---WSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC---CCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence 11 1245778889999999999999999976
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=4.2e-33 Score=294.54 Aligned_cols=205 Identities=28% Similarity=0.377 Sum_probs=153.1
Q ss_pred cccccccccccCCceeEEEEEec-CCc--EEEEEEeccc-CccchHhHHHHHHHHhcC-CCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQ--EIAVKRLSKA-SGQGQEEFMNEVMVISNL-QHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~lV 569 (760)
++|++.++||+|+||.||+|++. ++. .||||+++.. .....++|.+|+++|+++ +|||||+++|+|.+++..++|
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV 89 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 89 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence 57888899999999999999975 333 5888988643 344567899999999999 799999999999999999999
Q ss_pred EeccCCCChhhhh------------------------------------------------------------------c
Q 004345 570 YEYMPNKSLDSFL------------------------------------------------------------------F 583 (760)
Q Consensus 570 ~Ey~~~gsL~~~L------------------------------------------------------------------~ 583 (760)
|||+++|+|.++| +
T Consensus 90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~ 169 (309)
T d1fvra_ 90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 169 (309)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEc
Confidence 9999999998763 3
Q ss_pred cccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCC-CCCCCcccccccHHHHHHHhc
Q 004345 584 DFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK-NTSFYHEEFELTLLGYAWKLW 662 (760)
Q Consensus 584 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~-p~~~~~~~~~~~~~~~~~~~~ 662 (760)
|||+++..... .......||..|+|||.+....++.++|||||||++|||++|.. |+..... ..+... .
T Consensus 170 DfG~a~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~---~~~~~~----i 239 (309)
T d1fvra_ 170 DFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---AELYEK----L 239 (309)
T ss_dssp CTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHH----G
T ss_pred ccccccccccc---ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCH---HHHHHH----H
Confidence 99999864321 22234568999999999999999999999999999999999775 4532211 111111 1
Q ss_pred cCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 663 NDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 663 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
..+.. +. .+......+.+++.+||+.||++||||.||++.|++++++
T Consensus 240 ~~~~~-----~~----~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 286 (309)
T d1fvra_ 240 PQGYR-----LE----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 286 (309)
T ss_dssp GGTCC-----CC----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HhcCC-----CC----CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 11111 11 1111234677889999999999999999999999988654
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6.4e-33 Score=291.96 Aligned_cols=217 Identities=24% Similarity=0.383 Sum_probs=156.7
Q ss_pred cCHHHHHHhccccccccccccCCceeEEEEEec------CCcEEEEEEecccC-ccchHhHHHHHHHHhcC-CCCcccee
Q 004345 485 FNFEELANATNNFQLANKLGQGGFGPVYKGKLQ------DGQEIAVKRLSKAS-GQGQEEFMNEVMVISNL-QHRNLVRL 556 (760)
Q Consensus 485 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~nIv~l 556 (760)
++.++++...++|++.++||+|+||.||+|+.. +++.||||+++... ....+.+.+|..++.++ +|+|||++
T Consensus 3 ~~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~ 82 (299)
T d1ywna1 3 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 82 (299)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEe
Confidence 345566666788999999999999999999853 34689999997543 34456788898888777 68999999
Q ss_pred eeEEEeCC-eeEEEEeccCCCChhhhh-----------------------------------------------------
Q 004345 557 LGCCVERE-ENMLIYEYMPNKSLDSFL----------------------------------------------------- 582 (760)
Q Consensus 557 ~g~~~~~~-~~~lV~Ey~~~gsL~~~L----------------------------------------------------- 582 (760)
++++.+.+ ..++|||||++|+|.++|
T Consensus 83 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp 162 (299)
T d1ywna1 83 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 162 (299)
T ss_dssp EEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred eeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCc
Confidence 99987654 689999999999997753
Q ss_pred -------------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCC-CCCCCcc
Q 004345 583 -------------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRK-NTSFYHE 648 (760)
Q Consensus 583 -------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~-p~~~~~~ 648 (760)
+|||+|+...............||+.|||||.+.+..++.++|||||||++|||+||.. ||.....
T Consensus 163 ~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~ 242 (299)
T d1ywna1 163 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 242 (299)
T ss_dssp GGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred cceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCH
Confidence 39999998765554444556789999999999999999999999999999999999754 5543222
Q ss_pred cccccHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 649 EFELTLLGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.. .+ ......+...+ +.. .....+.+++.+||+.||++||||.||+++|++++
T Consensus 243 ~~--~~----~~~~~~~~~~~-----~~~----~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il 295 (299)
T d1ywna1 243 DE--EF----CRRLKEGTRMR-----APD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 295 (299)
T ss_dssp SH--HH----HHHHHHTCCCC-----CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HH--HH----HHHHhcCCCCC-----CCc----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 11 11 11111111111 111 12245778999999999999999999999998875
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=9.5e-33 Score=290.43 Aligned_cols=209 Identities=26% Similarity=0.392 Sum_probs=157.9
Q ss_pred HhccccccccccccCCceeEEEEEec--------CCcEEEEEEecccCc-cchHhHHHHHHHHhcC-CCCccceeeeEEE
Q 004345 492 NATNNFQLANKLGQGGFGPVYKGKLQ--------DGQEIAVKRLSKASG-QGQEEFMNEVMVISNL-QHRNLVRLLGCCV 561 (760)
Q Consensus 492 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~-~~~~~f~~E~~~l~~l-~H~nIv~l~g~~~ 561 (760)
...++|++.+.||+|+||.||+|+.. ++..||||+++.... ....++.+|+..+.++ +|||||+++++|.
T Consensus 10 i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~ 89 (299)
T d1fgka_ 10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 89 (299)
T ss_dssp CCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccc
Confidence 34578999999999999999999853 234799999976533 4457899999999888 7999999999999
Q ss_pred eCCeeEEEEeccCCCChhhhh-----------------------------------------------------------
Q 004345 562 EREENMLIYEYMPNKSLDSFL----------------------------------------------------------- 582 (760)
Q Consensus 562 ~~~~~~lV~Ey~~~gsL~~~L----------------------------------------------------------- 582 (760)
+++..++||||+++|+|.++|
T Consensus 90 ~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~ 169 (299)
T d1fgka_ 90 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 169 (299)
T ss_dssp SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred cCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeec
Confidence 999999999999999998764
Q ss_pred -------ccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcccccccH
Q 004345 583 -------FDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVS-GRKNTSFYHEEFELTL 654 (760)
Q Consensus 583 -------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~Ellt-G~~p~~~~~~~~~~~~ 654 (760)
+|||+++...............||+.|||||.+.++.++.|+|||||||++|||++ |..|+......
T Consensus 170 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~----- 244 (299)
T d1fgka_ 170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE----- 244 (299)
T ss_dssp TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----
T ss_pred CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH-----
Confidence 29999987755444444455678999999999999999999999999999999998 67776532221
Q ss_pred HHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 655 LGYAWKLWNDNNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 655 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.+...+..+...+ .... ....+.+++.+||+.||++||||.||+++|++++
T Consensus 245 --~~~~~i~~~~~~~-----~p~~----~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~ 295 (299)
T d1fgka_ 245 --ELFKLLKEGHRMD-----KPSN----CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295 (299)
T ss_dssp --HHHHHHHTTCCCC-----CCSS----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHcCCCCC-----CCcc----chHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence 1112222221111 1111 2245788999999999999999999999998874
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=8.6e-32 Score=283.44 Aligned_cols=214 Identities=21% Similarity=0.295 Sum_probs=152.5
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHH--HHHHhcCCCCccceeeeEEEeCC----eeEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNE--VMVISNLQHRNLVRLLGCCVERE----ENML 568 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E--~~~l~~l~H~nIv~l~g~~~~~~----~~~l 568 (760)
.+|.+.+.||+|+||.||+|++ +++.||||+++.. ..+++.+| +..+.+++|||||+++|+|.+.+ ..++
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l 78 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence 4577889999999999999997 5889999999643 23444444 44556789999999999998754 5799
Q ss_pred EEeccCCCChhhhh---------------------------------------------------------ccccceeEe
Q 004345 569 IYEYMPNKSLDSFL---------------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 569 V~Ey~~~gsL~~~L---------------------------------------------------------~DFGla~~~ 591 (760)
|||||++|+|.++| +|||+++..
T Consensus 79 v~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~ 158 (303)
T d1vjya_ 79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred EEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccc
Confidence 99999999998873 399999987
Q ss_pred cCCCcc--cccceeeeeccccCccccccCC------CCccchhHHHHHHHHHHHhCCCCCCCCcccccc--------cHH
Q 004345 592 GGNQDQ--AATKRLVGTYGYMSPEYAMEGR------FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFEL--------TLL 655 (760)
Q Consensus 592 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~------~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~--------~~~ 655 (760)
...... .......||+.|||||++.... ++.|+|||||||+||||+||..|+......... ...
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~ 238 (303)
T d1vjya_ 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchH
Confidence 544332 2334568999999999987543 677999999999999999998887532221110 001
Q ss_pred HHHHHhccCCCccccccccccCCC-CHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 656 GYAWKLWNDNNVIDLVDPLISESG-FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 656 ~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
......... +..+|.+.... .......+.+++.+||+.||++||||.||+++|+++.
T Consensus 239 ~~~~~~~~~----~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~ 296 (303)
T d1vjya_ 239 EEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp HHHHHHHTT----SCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhc----cccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 111111111 11122222211 2335567889999999999999999999999998764
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.97 E-value=1.7e-31 Score=277.69 Aligned_cols=209 Identities=22% Similarity=0.294 Sum_probs=151.1
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc---cchHhHHHHHHHHhcCCCCccceeeeEEEeCC----e
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG---QGQEEFMNEVMVISNLQHRNLVRLLGCCVERE----E 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~----~ 565 (760)
.++|++.+.||+|+||.||+|+. .+++.||||+++.... ...+.|.+|++++++++|||||++++++...+ .
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence 36799999999999999999995 5789999999975432 23457999999999999999999999998654 3
Q ss_pred eEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCC
Q 004345 566 NMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~ 595 (760)
.+|||||+++++|..++ .|||.++......
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~ 165 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 165 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC---
T ss_pred EEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhcccc
Confidence 78999999999998763 3899887654322
Q ss_pred c-ccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccc
Q 004345 596 D-QAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPL 674 (760)
Q Consensus 596 ~-~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 674 (760)
. .......+||+.|||||++.+..++.++|||||||++|||+||+.||...... ....+......... ..
T Consensus 166 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~~~~~~~~~~---~~ 236 (277)
T d1o6ya_ 166 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV------SVAYQHVREDPIPP---SA 236 (277)
T ss_dssp -------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHCCCCCG---GG
T ss_pred ccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHH------HHHHHHHhcCCCCC---ch
Confidence 2 22334568999999999999999999999999999999999999998633221 11122222211100 00
Q ss_pred ccCCCCHHHHHHHHHHHHhcccCCcCCCC-CHHHHHHHHhcc
Q 004345 675 ISESGFKMEIIRCVNVGLLCVQEFVKDRP-NMPTVVSMLNSE 715 (760)
Q Consensus 675 l~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-t~~ev~~~L~~~ 715 (760)
.... ....+.+++.+||+.||++|| |++++.+.|.++
T Consensus 237 ~~~~----~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~ 274 (277)
T d1o6ya_ 237 RHEG----LSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 274 (277)
T ss_dssp TSSS----CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred hccC----CCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence 1111 124577888999999999999 899999988764
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=8.1e-32 Score=284.98 Aligned_cols=194 Identities=23% Similarity=0.325 Sum_probs=154.7
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++.+.||+|+||+||+|+. .+++.||||++++. .....+.+.+|+.+|++++|||||++++++.+++..++||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 5799999999999999999996 46899999999743 2345678999999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
|||++|+|..++ +|||+|+..... .
T Consensus 84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~-----~ 158 (316)
T d1fota_ 84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----T 158 (316)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-----B
T ss_pred eecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccc-----c
Confidence 999999987762 499999986432 2
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
...+||+.|||||++.+..++.++||||+||+||||++|+.||...... .+ ..... .+.. .+...
T Consensus 159 ~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~---~~---~~~i~-~~~~------~~p~~-- 223 (316)
T d1fota_ 159 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM---KT---YEKIL-NAEL------RFPPF-- 223 (316)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HH---HHHHH-HCCC------CCCTT--
T ss_pred ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHH---HH---HHHHH-cCCC------CCCCC--
Confidence 3468999999999999999999999999999999999999999643221 11 11111 1110 01111
Q ss_pred HHHHHHHHHHHHhcccCCcCCCC-----CHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDRP-----NMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~RP-----t~~ev~~ 710 (760)
....+.+++.+||+.||.+|| |++++++
T Consensus 224 --~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~ 256 (316)
T d1fota_ 224 --FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 256 (316)
T ss_dssp --SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence 124567888999999999996 8999976
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.7e-31 Score=284.51 Aligned_cols=198 Identities=23% Similarity=0.278 Sum_probs=156.5
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
.++|++.+.||+|+||.||+|+. .+++.||||++++. .....+.+.+|+.+|++++|||||++++++.+++..++|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 36799999999999999999996 57899999999753 234567899999999999999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
||||++|+|..++ +|||+|+...... ..
T Consensus 84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~--~~ 161 (337)
T d1o6la_ 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--AT 161 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT--CC
T ss_pred eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCC--cc
Confidence 9999999998763 4999998654322 22
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... .+.. ....+.. .+....
T Consensus 162 ~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~---~~~~----~i~~~~~------~~p~~~ 228 (337)
T d1o6la_ 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFE----LILMEEI------RFPRTL 228 (337)
T ss_dssp BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCC------CCCTTS
T ss_pred cccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH---HHHH----HHhcCCC------CCCccC
Confidence 34578999999999999999999999999999999999999998643221 1111 1111110 111111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCC-----HHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPN-----MPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 710 (760)
...+.+++.+||+.||.+||+ +.|+++
T Consensus 229 ----s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 229 ----SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----CHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence 245678889999999999995 778776
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.5e-31 Score=279.73 Aligned_cols=206 Identities=19% Similarity=0.203 Sum_probs=146.5
Q ss_pred ccccccCCceeEEEEEe-cCCcEEEEEEecccCc-----cchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEecc
Q 004345 500 ANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG-----QGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEYM 573 (760)
Q Consensus 500 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-----~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 573 (760)
+++||+|+||+||+|+. .+++.||||+++.... ...+.+.+|+.+|++++|||||++++++..++..+|||||+
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~ 82 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 82 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence 57899999999999996 4689999999964321 12457999999999999999999999999999999999999
Q ss_pred CCCChhhh--------------------------------------------------hccccceeEecCCCccccccee
Q 004345 574 PNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAATKRL 603 (760)
Q Consensus 574 ~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~~~~ 603 (760)
+++++..+ |+|||+|+...... ......
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~--~~~~~~ 160 (299)
T d1ua2a_ 83 ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN--RAYTHQ 160 (299)
T ss_dssp SEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC--CCCCCS
T ss_pred cchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCc--ccccce
Confidence 98876654 24999998654322 223345
Q ss_pred eeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC---CCcccc------ccc
Q 004345 604 VGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND---NNVIDL------VDP 673 (760)
Q Consensus 604 ~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------~d~ 673 (760)
+||+.|||||++... .++.++|||||||++|||++|+.||....+.+ ......+.... ....+. ...
T Consensus 161 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~---~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T d1ua2a_ 161 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD---QLTRIFETLGTPTEEQWPDMCSLPDYVTF 237 (299)
T ss_dssp CCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred ecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH---HHHHHHHhcCCCChhhccchhccchhhhh
Confidence 799999999998755 57999999999999999999999986433222 11111111110 000000 000
Q ss_pred cccCCCCH-----HHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 674 LISESGFK-----MEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 674 ~l~~~~~~-----~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......+. .....+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~ 279 (299)
T d1ua2a_ 238 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279 (299)
T ss_dssp CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence 00000111 11256788999999999999999999987
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.97 E-value=1.2e-30 Score=279.84 Aligned_cols=194 Identities=22% Similarity=0.279 Sum_probs=154.6
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEeccc---CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA---SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 570 (760)
++|++++.||+|+||.||+|+. .+++.||||++++. .....+.+++|+++|++++|||||++++++.+....++||
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~ 120 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence 5799999999999999999996 47899999999643 2345567999999999999999999999999999999999
Q ss_pred eccCCCChhhhh--------------------------------------------------ccccceeEecCCCccccc
Q 004345 571 EYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 571 Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~ 600 (760)
||+.+|+|..+| +|||+|+.+... .
T Consensus 121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~-----~ 195 (350)
T d1rdqe_ 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----T 195 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----B
T ss_pred ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc-----c
Confidence 999999997763 499999986432 2
Q ss_pred ceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCCC
Q 004345 601 KRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESGF 680 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 680 (760)
....||+.|||||++.+..++.++|||||||++|||+||+.||...... .+.... . .+.. .....
T Consensus 196 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~---~~~~~i---~-~~~~------~~p~~-- 260 (350)
T d1rdqe_ 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKI---V-SGKV------RFPSH-- 260 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH---H-HCCC------CCCTT--
T ss_pred ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHH---HHHHHH---h-cCCC------CCCcc--
Confidence 3468999999999999999999999999999999999999998632211 111111 1 1110 01111
Q ss_pred HHHHHHHHHHHHhcccCCcCCC-----CCHHHHHH
Q 004345 681 KMEIIRCVNVGLLCVQEFVKDR-----PNMPTVVS 710 (760)
Q Consensus 681 ~~~~~~~~~l~~~Cl~~~P~~R-----Pt~~ev~~ 710 (760)
....+.+++.+||+.||.+| ||+.++++
T Consensus 261 --~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 261 --FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence 12457788889999999999 48999986
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.9e-31 Score=279.08 Aligned_cols=200 Identities=19% Similarity=0.269 Sum_probs=156.3
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
.++|++.+.||+|+||+||+|... +++.||||+++... .....+.+|+++|++++|||||++++++.+++..+|||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence 467999999999999999999964 68899999997543 3345688999999999999999999999999999999999
Q ss_pred cCCCChhhhh-----------------------------------------------------ccccceeEecCCCcccc
Q 004345 573 MPNKSLDSFL-----------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 573 ~~~gsL~~~L-----------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
|++|+|.++| +|||+++...... .
T Consensus 83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~---~ 159 (321)
T d1tkia_ 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---N 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC---E
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCC---c
Confidence 9999998763 3999998764322 2
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....+|+.|+|||.+.+..++.++||||+||++|||++|+.||...... .... ..... .. . .+......
T Consensus 160 ~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~---~~~~---~i~~~-~~-~-~~~~~~~~- 229 (321)
T d1tkia_ 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ---QIIE---NIMNA-EY-T-FDEEAFKE- 229 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH---HHHHT-CC-C-CCHHHHTT-
T ss_pred ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH---HHHH---HHHhC-CC-C-CChhhccC-
Confidence 33467899999999999999999999999999999999999998643221 1111 11111 00 0 00000001
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
....+.+++.+||+.||++|||+.|+++
T Consensus 230 ---~s~~~~~li~~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 230 ---ISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp ---SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1245778899999999999999999987
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=1.1e-30 Score=270.78 Aligned_cols=200 Identities=19% Similarity=0.279 Sum_probs=153.1
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCcc---------chHhHHHHHHHHhcCC-CCccceeeeEEEeC
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQ---------GQEEFMNEVMVISNLQ-HRNLVRLLGCCVER 563 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~---------~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~ 563 (760)
++|++.+.||+|+||+||+|+. .+++.||||++++.... ..+.+.+|+.++++++ |||||++++++.++
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 5799999999999999999996 57899999999754211 1246889999999997 99999999999999
Q ss_pred CeeEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecC
Q 004345 564 EENMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 564 ~~~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~ 593 (760)
+..+||||||++|+|.++| +|||+++.+..
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 162 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 162 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccC
Confidence 9999999999999998874 49999998754
Q ss_pred CCcccccceeeeeccccCcccccc------CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAME------GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNV 667 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (760)
... .....||+.|+|||++.. ..++.++||||+||++|||++|+.||....... .. .....+..
T Consensus 163 ~~~---~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~---~~----~~i~~~~~ 232 (277)
T d1phka_ 163 GEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML---ML----RMIMSGNY 232 (277)
T ss_dssp TCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH----HHHHHTCC
T ss_pred CCc---eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHH---HH----HHHHhCCC
Confidence 322 234679999999999863 347899999999999999999999996432211 11 11111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 668 IDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 668 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
. ...+. ...-.+.+.+++.+||+.||++|||+.||++
T Consensus 233 ~-~~~~~-----~~~~s~~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 233 Q-FGSPE-----WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp C-CCTTT-----GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred C-CCCcc-----cccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 0 00000 1111246778899999999999999999865
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.3e-31 Score=279.84 Aligned_cols=197 Identities=25% Similarity=0.350 Sum_probs=153.3
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEeccc---CccchHhHHHHHHHHh-cCCCCccceeeeEEEeCCeeEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKA---SGQGQEEFMNEVMVIS-NLQHRNLVRLLGCCVEREENMLI 569 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~f~~E~~~l~-~l~H~nIv~l~g~~~~~~~~~lV 569 (760)
++|++.++||+|+||+||+|+.. +++.||||++++. .....+.+.+|..++. .++|||||++++++.+++..+||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 57999999999999999999964 6899999999753 2345567788888765 68999999999999999999999
Q ss_pred EeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccc
Q 004345 570 YEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAA 599 (760)
Q Consensus 570 ~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~ 599 (760)
||||++|+|.++| +|||+++...... ..
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~--~~ 159 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--AK 159 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT--CC
T ss_pred EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhccccc--cc
Confidence 9999999999874 3999998654322 22
Q ss_pred cceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccccccCCC
Q 004345 600 TKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLISESG 679 (760)
Q Consensus 600 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 679 (760)
.....||+.|||||++.+..++.++|||||||++|||++|+.||...... .+.... ..+. +.+....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~---~~~~~i----~~~~------~~~p~~~ 226 (320)
T d1xjda_ 160 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE---ELFHSI----RMDN------PFYPRWL 226 (320)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH----HHCC------CCCCTTS
T ss_pred ccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH---HHHHHH----HcCC------CCCCccC
Confidence 33468999999999999999999999999999999999999999643221 111111 1111 1111111
Q ss_pred CHHHHHHHHHHHHhcccCCcCCCCCHH-HHHH
Q 004345 680 FKMEIIRCVNVGLLCVQEFVKDRPNMP-TVVS 710 (760)
Q Consensus 680 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~-ev~~ 710 (760)
...+.+++.+||+.||++|||+. |+++
T Consensus 227 ----s~~~~dli~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 227 ----EKEAKDLLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp ----CHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ----CHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence 24577889999999999999995 6754
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=1.5e-30 Score=280.63 Aligned_cols=198 Identities=24% Similarity=0.294 Sum_probs=149.6
Q ss_pred cccccccccccCCceeEEEEEec-CCcEEEEEEecccC---ccchHhHHHH---HHHHhcCCCCccceeeeEEEeCCeeE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS---GQGQEEFMNE---VMVISNLQHRNLVRLLGCCVEREENM 567 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~f~~E---~~~l~~l~H~nIv~l~g~~~~~~~~~ 567 (760)
++|++.++||+|+||.||+|+.. +++.||||++.+.. ......+.+| +.+++.++|||||++++++.+.+..+
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ 83 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 83 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence 67999999999999999999964 68999999986431 2233344444 67788889999999999999999999
Q ss_pred EEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCCcc
Q 004345 568 LIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQ 597 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~ 597 (760)
|||||+++|+|.++| +|||+|+.+....
T Consensus 84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~-- 161 (364)
T d1omwa3 84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 161 (364)
T ss_dssp EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSC--
T ss_pred EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCc--
Confidence 999999999998874 4999999775332
Q ss_pred cccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccccccc
Q 004345 598 AATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDPLIS 676 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 676 (760)
.....||+.|||||++.. ..++.++|||||||+||||+||+.||........ ........ ... ..+.
T Consensus 162 --~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~~~~~~~~-~~~------~~~~ 229 (364)
T d1omwa3 162 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---HEIDRMTL-TMA------VELP 229 (364)
T ss_dssp --CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCH---HHHHHHSS-SCC------CCCC
T ss_pred --ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHhcc-cCC------CCCC
Confidence 334679999999999975 4689999999999999999999999964332211 11111110 000 0111
Q ss_pred CCCCHHHHHHHHHHHHhcccCCcCCCCC-----HHHHHH
Q 004345 677 ESGFKMEIIRCVNVGLLCVQEFVKDRPN-----MPTVVS 710 (760)
Q Consensus 677 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 710 (760)
... ...+.+++.+||+.||++||| +.|+++
T Consensus 230 ~~~----s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 230 DSF----SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp SSS----CHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred CCC----CHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 111 245778889999999999999 588865
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.7e-30 Score=273.10 Aligned_cols=215 Identities=23% Similarity=0.287 Sum_probs=151.5
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|++.++||+|+||+||+|+. .+++.||||+++... ....+++.+|+++|++++|||||++++++.+++..++|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 5899999999999999999996 578999999996442 2346789999999999999999999999999999999999
Q ss_pred ccCCCChhhh---------------------------------------------------hccccceeEecCCCccccc
Q 004345 572 YMPNKSLDSF---------------------------------------------------LFDFGLARIFGGNQDQAAT 600 (760)
Q Consensus 572 y~~~gsL~~~---------------------------------------------------L~DFGla~~~~~~~~~~~~ 600 (760)
|+.++.+... |+|||+|+...... ...
T Consensus 82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~--~~~ 159 (298)
T d1gz8a_ 82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--RTY 159 (298)
T ss_dssp CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS--BCT
T ss_pred ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCc--ccc
Confidence 9986544322 24999998764322 233
Q ss_pred ceeeeeccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCC---cccccc--cc
Q 004345 601 KRLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNN---VIDLVD--PL 674 (760)
Q Consensus 601 ~~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d--~~ 674 (760)
....||+.|+|||.+.... ++.++||||+||++|||++|+.||....................+.. .....+ ..
T Consensus 160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T d1gz8a_ 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239 (298)
T ss_dssp TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccc
Confidence 3468999999999987665 57899999999999999999999964332211111000000000000 000000 00
Q ss_pred c-c-CCCCH-----HHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 675 I-S-ESGFK-----MEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 675 l-~-~~~~~-----~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
. . ..... .....+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 0 0 00000 112567888999999999999999999884
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.6e-30 Score=277.20 Aligned_cols=200 Identities=16% Similarity=0.143 Sum_probs=148.7
Q ss_pred cccccccc-ccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhc-CCCCccceeeeEEEe----CCee
Q 004345 494 TNNFQLAN-KLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISN-LQHRNLVRLLGCCVE----REEN 566 (760)
Q Consensus 494 ~~~~~~~~-~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~-l~H~nIv~l~g~~~~----~~~~ 566 (760)
.++|++.+ .||+|+||.||+|+. .+++.||||++++ .+.+.+|+.++.+ .+|||||++++++.+ +...
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~ 84 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 84 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence 35788875 599999999999995 5789999999853 3567889998765 489999999999875 4568
Q ss_pred EEEEeccCCCChhhhh-------------------------------------------------------ccccceeEe
Q 004345 567 MLIYEYMPNKSLDSFL-------------------------------------------------------FDFGLARIF 591 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~L-------------------------------------------------------~DFGla~~~ 591 (760)
+||||||++|+|.++| +|||+|+..
T Consensus 85 ~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~ 164 (335)
T d2ozaa1 85 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164 (335)
T ss_dssp EEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeec
Confidence 9999999999998874 399999876
Q ss_pred cCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccc
Q 004345 592 GGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 592 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (760)
..... .....||+.|||||++.+..|+.++|||||||+||||+||+.||........ ..........+..
T Consensus 165 ~~~~~---~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~---~~~~~~~i~~~~~---- 234 (335)
T d2ozaa1 165 TSHNS---LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---SPGMKTRIRMGQY---- 234 (335)
T ss_dssp CCCCC---CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-----------CCCSCSS----
T ss_pred cCCCc---cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH---HHHHHHHHhcCCC----
Confidence 54322 2346799999999999999999999999999999999999999963322111 0001011000000
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+...........+.+++.+||+.||++|||+.|+++
T Consensus 235 --~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 271 (335)
T d2ozaa1 235 --EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 271 (335)
T ss_dssp --SCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 0000000112356788999999999999999999988
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.96 E-value=2.8e-30 Score=269.83 Aligned_cols=211 Identities=23% Similarity=0.336 Sum_probs=151.6
Q ss_pred cccccccccccCCceeEEEEEecCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.++||+|+||+||+|+.++++.||||+++.. .....+.|.+|+.+|++++|||||++++++..++..++++||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 689999999999999999999999999999999754 233467899999999999999999999999999999999999
Q ss_pred cCCCChhhh--------------------------------------------------hccccceeEecCCCcccccce
Q 004345 573 MPNKSLDSF--------------------------------------------------LFDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 573 ~~~gsL~~~--------------------------------------------------L~DFGla~~~~~~~~~~~~~~ 602 (760)
+.++.+..+ |+|||++....... .....
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~ 159 (286)
T d1ob3a_ 82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--RKYTH 159 (286)
T ss_dssp CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred ehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCc--cccce
Confidence 988776554 24999998754322 22334
Q ss_pred eeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCC---C---cccc-----
Q 004345 603 LVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDN---N---VIDL----- 670 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~----- 670 (760)
..+++.|+|||.+... .++.++||||+||++|||++|+.||......+. ........... . ..+.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T d1ob3a_ 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ---LMRIFRILGTPNSKNWPNVTELPKYDP 236 (286)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred ecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHH---HHHHHHhhCCCChhhccchhhhhhccc
Confidence 5689999999999754 578999999999999999999999964332211 11111111000 0 0000
Q ss_pred ----ccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 671 ----VDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 671 ----~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
..+.............+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000000001111246778999999999999999999974
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=5.8e-30 Score=265.36 Aligned_cols=189 Identities=25% Similarity=0.429 Sum_probs=147.1
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCc------cchHhHHHHHHHHhcCC--CCccceeeeEEEeCCe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASG------QGQEEFMNEVMVISNLQ--HRNLVRLLGCCVEREE 565 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~------~~~~~f~~E~~~l~~l~--H~nIv~l~g~~~~~~~ 565 (760)
++|++.+.||+|+||.||+|+. .+++.||||++++... ....++.+|+.+|++++ |||||++++++.+++.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 5799999999999999999995 5789999999975321 22345789999999986 8999999999999999
Q ss_pred eEEEEeccCC-CChhhhh---------------------------------------------------ccccceeEecC
Q 004345 566 NMLIYEYMPN-KSLDSFL---------------------------------------------------FDFGLARIFGG 593 (760)
Q Consensus 566 ~~lV~Ey~~~-gsL~~~L---------------------------------------------------~DFGla~~~~~ 593 (760)
.++||||+.+ +++.+++ +|||+|+....
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~ 163 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD 163 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceeccc
Confidence 9999999976 5665542 49999987542
Q ss_pred CCcccccceeeeeccccCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCcccccc
Q 004345 594 NQDQAATKRLVGTYGYMSPEYAMEGRF-SEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVD 672 (760)
Q Consensus 594 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 672 (760)
. ......||+.|||||++....+ +.++||||+||++|||++|+.||..... ... +..
T Consensus 164 ~----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~---------i~~----~~~----- 221 (273)
T d1xwsa_ 164 T----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIR----GQV----- 221 (273)
T ss_dssp S----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH---------HHH----CCC-----
T ss_pred c----cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH---------Hhh----ccc-----
Confidence 2 2334689999999999987765 5778999999999999999999853110 000 000
Q ss_pred ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.+....+ ..+.+++.+||+.||++|||+.|+++
T Consensus 222 -~~~~~~s----~~~~~li~~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 222 -FFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp -CCSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CCCCCCC----HHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 0111112 45778889999999999999999977
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.2e-29 Score=267.44 Aligned_cols=214 Identities=21% Similarity=0.306 Sum_probs=148.6
Q ss_pred ccccccccccccCCceeEEEEEe-cC-CcEEEEEEecccC--ccchHhHHHHHHHHhcC---CCCccceeeeEEEe----
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QD-GQEIAVKRLSKAS--GQGQEEFMNEVMVISNL---QHRNLVRLLGCCVE---- 562 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~-~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l---~H~nIv~l~g~~~~---- 562 (760)
.++|+++++||+|+||+||+|+. ++ ++.||||+++... ......+.+|+.+|+.| +|||||+++++|..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~ 85 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 85 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence 46899999999999999999996 34 5679999987532 23345677888887665 89999999999864
Q ss_pred -CCeeEEEEeccCCCChhhh---------------------------------------------------hccccceeE
Q 004345 563 -REENMLIYEYMPNKSLDSF---------------------------------------------------LFDFGLARI 590 (760)
Q Consensus 563 -~~~~~lV~Ey~~~gsL~~~---------------------------------------------------L~DFGla~~ 590 (760)
....+++|||+.++.+... |+|||+++.
T Consensus 86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~ 165 (305)
T d1blxa_ 86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 165 (305)
T ss_dssp SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhh
Confidence 2467999999998876432 249999886
Q ss_pred ecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHH-----hccCC
Q 004345 591 FGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWK-----LWNDN 665 (760)
Q Consensus 591 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~-----~~~~~ 665 (760)
.... .......||+.|||||++.+..++.++||||+||++|||++|+.||......+....+..... .+...
T Consensus 166 ~~~~---~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 242 (305)
T d1blxa_ 166 YSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 242 (305)
T ss_dssp CCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred hccc---ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccc
Confidence 5322 233456899999999999999999999999999999999999999964432221111111000 00000
Q ss_pred -Ccc-cccc---ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 666 -NVI-DLVD---PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 666 -~~~-~~~d---~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
... .... ..............+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~ 292 (305)
T d1blxa_ 243 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292 (305)
T ss_dssp CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000 0000 00000011111245678899999999999999999976
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.7e-29 Score=265.42 Aligned_cols=218 Identities=19% Similarity=0.272 Sum_probs=150.6
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEeccc--CccchHhHHHHHHHHhcCCCCccceeeeEEEe--------
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKA--SGQGQEEFMNEVMVISNLQHRNLVRLLGCCVE-------- 562 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~-------- 562 (760)
.++|++.++||+|+||+||+|+. .+++.||||++... .....+.+.+|+.+|++++||||+++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 37899999999999999999996 57899999998643 33455779999999999999999999999865
Q ss_pred CCeeEEEEeccCCCChhhh--------------------------------------------------hccccceeEec
Q 004345 563 REENMLIYEYMPNKSLDSF--------------------------------------------------LFDFGLARIFG 592 (760)
Q Consensus 563 ~~~~~lV~Ey~~~gsL~~~--------------------------------------------------L~DFGla~~~~ 592 (760)
+...++||||++++.+..+ |+|||+++.+.
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~ 168 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 168 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecc
Confidence 3457999999988776543 24999998765
Q ss_pred CCCcc--cccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccc
Q 004345 593 GNQDQ--AATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVID 669 (760)
Q Consensus 593 ~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (760)
..... ......+||+.|+|||.+... .++.|+||||+||++|||++|+.||..........................
T Consensus 169 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 248 (318)
T d3blha1 169 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 248 (318)
T ss_dssp C-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred cccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccc
Confidence 33222 222345799999999998765 689999999999999999999999864333222211111111111100000
Q ss_pred --------ccccccc-CCCCHHH------HHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 670 --------LVDPLIS-ESGFKME------IIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 670 --------~~d~~l~-~~~~~~~------~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.+..... ....... ...+++++.+||+.||++|||++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 249 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp CCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 0000000 0011111 2356789999999999999999999873
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.95 E-value=1.2e-28 Score=258.92 Aligned_cols=210 Identities=20% Similarity=0.276 Sum_probs=150.4
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCCCcccee-eeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRL-LGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l-~g~~~~~~~~~lV~Ey 572 (760)
++|++.+.||+|+||.||+|+. .+++.||||++.... ..+++.+|++++++++|+|+|.. .++..+++..++||||
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~ 84 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 84 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence 5799999999999999999995 568999999886532 34568899999999987765554 5556777888999999
Q ss_pred cCCCChhhh------------------------------------------------------hccccceeEecCCCcc-
Q 004345 573 MPNKSLDSF------------------------------------------------------LFDFGLARIFGGNQDQ- 597 (760)
Q Consensus 573 ~~~gsL~~~------------------------------------------------------L~DFGla~~~~~~~~~- 597 (760)
+.+ +|... |+|||+|+.+......
T Consensus 85 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~ 163 (299)
T d1ckia_ 85 LGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 163 (299)
T ss_dssp CCC-BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCC
T ss_pred cCC-chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecccccccc
Confidence 954 44332 1499999987543321
Q ss_pred ----cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 598 ----AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 598 ----~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
.......||+.|||||.+.+..++.++|||||||++|||++|+.||........................ +
T Consensus 164 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 238 (299)
T d1ckia_ 164 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----E 238 (299)
T ss_dssp BCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCH-----H
T ss_pred ceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCCh-----h
Confidence 1234568999999999999999999999999999999999999999654332221111111000000000 0
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccc
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEI 716 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 716 (760)
.+.... ...+.+++..||+.||++||++.++.+.|+...
T Consensus 239 ~~~~~~----p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~ 277 (299)
T d1ckia_ 239 VLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277 (299)
T ss_dssp HHTTTS----CHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred HhccCC----CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 111111 245778888999999999999999999887654
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.95 E-value=2.1e-28 Score=256.21 Aligned_cols=212 Identities=15% Similarity=0.230 Sum_probs=158.7
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCCC-CccceeeeEEEeCCeeEEEEec
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQH-RNLVRLLGCCVEREENMLIYEY 572 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H-~nIv~l~g~~~~~~~~~lV~Ey 572 (760)
++|++.++||+|+||.||+|+. .+++.||||++... ...+.+.+|+++++.++| +|++.+++++..+...++||||
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~ 82 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 82 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccc--cCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence 6899999999999999999995 46899999988643 234568889999999975 8999999999999999999999
Q ss_pred cCCCChhhhh--------------------------------------------------------ccccceeEecCCCc
Q 004345 573 MPNKSLDSFL--------------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 573 ~~~gsL~~~L--------------------------------------------------------~DFGla~~~~~~~~ 596 (760)
+ +++|.+++ +|||+|+.+.....
T Consensus 83 ~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~ 161 (293)
T d1csna_ 83 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 161 (293)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred c-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCcc
Confidence 9 67887652 49999998653321
Q ss_pred c-----cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccc
Q 004345 597 Q-----AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLV 671 (760)
Q Consensus 597 ~-----~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (760)
. ......+||+.|||||.+.+..++.++|||||||++|||+||+.||.........................+
T Consensus 162 ~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~-- 239 (293)
T d1csna_ 162 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE-- 239 (293)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH--
T ss_pred ccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHH--
Confidence 1 123346899999999999999999999999999999999999999964433222111111111100001111
Q ss_pred cccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHHHhccccC
Q 004345 672 DPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSMLNSEIKD 718 (760)
Q Consensus 672 d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~ 718 (760)
+....+ +++.+++..|++.+|++||+++.+.+.|++.++.
T Consensus 240 ---l~~~~p----~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~ 279 (293)
T d1csna_ 240 ---LCAGFP----EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279 (293)
T ss_dssp ---HTTTSC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ---hcCCCC----HHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHH
Confidence 111111 4577788899999999999999999988876543
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.7e-28 Score=258.52 Aligned_cols=202 Identities=23% Similarity=0.329 Sum_probs=152.3
Q ss_pred cccccccccccCCceeEEEEEe----cCCcEEEEEEeccc----CccchHhHHHHHHHHhcCCC-CccceeeeEEEeCCe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL----QDGQEIAVKRLSKA----SGQGQEEFMNEVMVISNLQH-RNLVRLLGCCVEREE 565 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~l~~~----~~~~~~~f~~E~~~l~~l~H-~nIv~l~g~~~~~~~ 565 (760)
++|++.++||+|+||+||+|+. .+++.||||++++. .....+.+.+|++++++++| |||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 6799999999999999999984 24789999999753 22345679999999999966 899999999999999
Q ss_pred eEEEEeccCCCChhhhh--------------------------------------------------ccccceeEecCCC
Q 004345 566 NMLIYEYMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQ 595 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~ 595 (760)
.++||||+.+|+|.+++ +|||+++.+....
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~ 183 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 183 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG
T ss_pred eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccc
Confidence 99999999999998763 4999999775333
Q ss_pred cccccceeeeeccccCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCccccccc
Q 004345 596 DQAATKRLVGTYGYMSPEYAMEG--RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNVIDLVDP 673 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 673 (760)
.. ......|++.|+|||.+... .++.++|||||||+||||++|+.||...........+ ....... . +
T Consensus 184 ~~-~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i--~~~~~~~-~------~ 253 (322)
T d1vzoa_ 184 TE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI--SRRILKS-E------P 253 (322)
T ss_dssp GG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHH--HHHHHHC-C------C
T ss_pred cc-cccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHhcccC-C------C
Confidence 22 23346799999999999754 4788999999999999999999998644332211111 1111100 0 0
Q ss_pred cccCCCCHHHHHHHHHHHHhcccCCcCCCCC-----HHHHHH
Q 004345 674 LISESGFKMEIIRCVNVGLLCVQEFVKDRPN-----MPTVVS 710 (760)
Q Consensus 674 ~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt-----~~ev~~ 710 (760)
. .+.....++.+++.+||+.||++||| ++|+++
T Consensus 254 ~----~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 254 P----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp C----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred C----CcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 0 11122356778889999999999994 788876
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.2e-28 Score=264.49 Aligned_cols=215 Identities=19% Similarity=0.272 Sum_probs=145.6
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC------
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE------ 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~------ 564 (760)
.++|++.++||+|+||+||+|+. .+++.||||+++... ....+.+.+|+++|++++|||||+++++|...+
T Consensus 17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~ 96 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 96 (346)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence 46899999999999999999995 468999999997542 233567899999999999999999999998665
Q ss_pred eeEEEEeccCCCChhhh-------------------------------------------------hccccceeEecCCC
Q 004345 565 ENMLIYEYMPNKSLDSF-------------------------------------------------LFDFGLARIFGGNQ 595 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~-------------------------------------------------L~DFGla~~~~~~~ 595 (760)
..+|||||+ +.+|..+ |+|||+|+.....
T Consensus 97 ~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~- 174 (346)
T d1cm8a_ 97 DFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE- 174 (346)
T ss_dssp CCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS-
T ss_pred eEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCc-
Confidence 469999999 4555543 2499999876432
Q ss_pred cccccceeeeeccccCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHH--------HHhccCCC
Q 004345 596 DQAATKRLVGTYGYMSPEYAMEG-RFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYA--------WKLWNDNN 666 (760)
Q Consensus 596 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~--------~~~~~~~~ 666 (760)
.....||+.|+|||.+.+. .++.++||||+||++|||++|+.||............... ........
T Consensus 175 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (346)
T d1cm8a_ 175 ----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 250 (346)
T ss_dssp ----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred ----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchh
Confidence 2346799999999998764 5789999999999999999999998644322111110000 00000000
Q ss_pred -------ccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH--Hhcc
Q 004345 667 -------VIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM--LNSE 715 (760)
Q Consensus 667 -------~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~--L~~~ 715 (760)
..+.....+.. ........+.+++.+||+.||++|||+.|+++. ++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~-~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~ 307 (346)
T d1cm8a_ 251 AKNYMKGLPELEKKDFAS-ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 307 (346)
T ss_dssp HHHHHHHSCCCCCCCGGG-TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred hhhhhccCCcccccchHH-hccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence 00000000000 001112456788999999999999999999984 5554
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=4.3e-28 Score=253.78 Aligned_cols=212 Identities=19% Similarity=0.268 Sum_probs=154.3
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeCCeeEEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVEREENMLIYE 571 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 571 (760)
++|+++++||+|+||+||+|+. .+++.||||+++... ....+++.+|+.+|++++|||||++++++.+....++|+|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 5899999999999999999995 578899999996442 3345789999999999999999999999999999999999
Q ss_pred ccCCCChhhhh--------------------------------------------------ccccceeEecCCCcccccc
Q 004345 572 YMPNKSLDSFL--------------------------------------------------FDFGLARIFGGNQDQAATK 601 (760)
Q Consensus 572 y~~~gsL~~~L--------------------------------------------------~DFGla~~~~~~~~~~~~~ 601 (760)
++.+++|..++ +|||.++....... ...
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~--~~~ 159 (292)
T d1unla_ 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR--CYS 159 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS--CCC
T ss_pred eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCc--cce
Confidence 99998887652 49999998753322 222
Q ss_pred eeeeeccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccC---CC---cccccc--
Q 004345 602 RLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWND---NN---VIDLVD-- 672 (760)
Q Consensus 602 ~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~d-- 672 (760)
...+++.|+|||.+.... ++.++||||+||++|||++|+.|+.......+ ....+...... .. .....+
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T d1unla_ 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH--HHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHH--HHHHHHhhcCCCChhhhhhhhhccccc
Confidence 346788999999988665 68999999999999999999999753322211 11111111110 00 000000
Q ss_pred ------cc-ccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 673 ------PL-ISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 673 ------~~-l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.. -...........+.+++.+|++.||++|||++||++
T Consensus 238 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 000011112245778889999999999999999976
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.95 E-value=1.4e-27 Score=254.37 Aligned_cols=210 Identities=17% Similarity=0.320 Sum_probs=152.2
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCC-CCccceeeeEEEeC--CeeEEEE
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVER--EENMLIY 570 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~--~~~~lV~ 570 (760)
++|++.++||+|+||+||+|+. .+++.||||+++.. ..+++.+|+++|++++ ||||+++++++... ...++||
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~ 111 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 111 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence 6899999999999999999996 57899999999643 3567899999999995 99999999999754 4689999
Q ss_pred eccCCCChhhh------------------------------------------------hccccceeEecCCCcccccce
Q 004345 571 EYMPNKSLDSF------------------------------------------------LFDFGLARIFGGNQDQAATKR 602 (760)
Q Consensus 571 Ey~~~gsL~~~------------------------------------------------L~DFGla~~~~~~~~~~~~~~ 602 (760)
||+.+++|..+ |+|||+|+....... ...
T Consensus 112 e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~---~~~ 188 (328)
T d3bqca1 112 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE---YNV 188 (328)
T ss_dssp ECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCC---CCS
T ss_pred eecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCc---ccc
Confidence 99999999775 249999998654332 334
Q ss_pred eeeeccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHH-----------HHHHHhccC--CCcc
Q 004345 603 LVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLL-----------GYAWKLWND--NNVI 668 (760)
Q Consensus 603 ~~gt~~y~aPE~~~~~~-~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~-----------~~~~~~~~~--~~~~ 668 (760)
..+|+.|+|||.+.... ++.++||||+||+++||++|+.||............ .+....-.. ....
T Consensus 189 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 268 (328)
T d3bqca1 189 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN 268 (328)
T ss_dssp CCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGG
T ss_pred cccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccc
Confidence 67899999999987654 799999999999999999999998654332211000 000000000 0000
Q ss_pred cccc--------ccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 669 DLVD--------PLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 669 ~~~d--------~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
.... ..............+.+++.+||+.||++|||++|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 269 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp GTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000 00011111112245788999999999999999999976
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.9e-28 Score=261.33 Aligned_cols=217 Identities=16% Similarity=0.202 Sum_probs=149.2
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC-ccchHhHHHHHHHHhcCCCCccceeeeEEEeCC----eeE
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS-GQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE----ENM 567 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~----~~~ 567 (760)
+++|+++++||+|+||+||+|+. .+++.||||++++.. ....+.+++|+.+|++++||||+++++++.... ..+
T Consensus 7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~ 86 (345)
T d1pmea_ 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 86 (345)
T ss_dssp CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence 45799999999999999999985 579999999997543 334568999999999999999999999997654 235
Q ss_pred EEEeccCCCChhhhh-------------------------------------------------ccccceeEecCCCcc-
Q 004345 568 LIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQDQ- 597 (760)
Q Consensus 568 lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~~- 597 (760)
+++||+.+|+|.+++ +|||+|+........
T Consensus 87 ~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~ 166 (345)
T d1pmea_ 87 YLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 166 (345)
T ss_dssp EEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC
T ss_pred EEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccc
Confidence 556677899998873 499999876443322
Q ss_pred cccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHhccCCCc--------c
Q 004345 598 AATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKLWNDNNV--------I 668 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 668 (760)
......+||+.|+|||.+.. ..++.++||||+||++|||++|+.||......+................. .
T Consensus 167 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (345)
T d1pmea_ 167 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR 246 (345)
T ss_dssp CTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHH
T ss_pred eeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhh
Confidence 22345679999999999854 56789999999999999999999998643322111111100000000000 0
Q ss_pred ccc--cccccCCCCHH-----HHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 669 DLV--DPLISESGFKM-----EIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 669 ~~~--d~~l~~~~~~~-----~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
... .+.. ...+.. ...++.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 247 NYLLSLPHK-NKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHTSCCC-CCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccccCCcc-CCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000 0000 000111 11357789999999999999999999874
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=9.4e-28 Score=257.80 Aligned_cols=208 Identities=19% Similarity=0.211 Sum_probs=144.5
Q ss_pred ccccccccccCCceeEEEEEec-CCcEEEEEEecccCccchHhHHHHHHHHhcCCCCccceeeeEEEeCC------eeEE
Q 004345 496 NFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKASGQGQEEFMNEVMVISNLQHRNLVRLLGCCVERE------ENML 568 (760)
Q Consensus 496 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~------~~~l 568 (760)
+|+..++||+|+||+||+|+.. +++.||||++.... ..+.+|+++|++++|||||++++++.... ..+|
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc----hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 5788899999999999999964 68999999996543 23347999999999999999999986532 4689
Q ss_pred EEeccCCCChhhh------------------------------------------------------hccccceeEecCC
Q 004345 569 IYEYMPNKSLDSF------------------------------------------------------LFDFGLARIFGGN 594 (760)
Q Consensus 569 V~Ey~~~gsL~~~------------------------------------------------------L~DFGla~~~~~~ 594 (760)
|||||+++.+..+ |+|||+++.+...
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~ 176 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTT
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCC
Confidence 9999987643322 2499999877543
Q ss_pred CcccccceeeeeccccCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHH--------HHHhccC-
Q 004345 595 QDQAATKRLVGTYGYMSPEYAME-GRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGY--------AWKLWND- 664 (760)
Q Consensus 595 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~--------~~~~~~~- 664 (760)
.. .....||..|+|||.+.. ..++.++||||+||++|||++|+.||......+....+.. .+.....
T Consensus 177 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~ 253 (350)
T d1q5ka_ 177 EP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253 (350)
T ss_dssp SC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC-
T ss_pred cc---cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccc
Confidence 32 234579999999999875 4689999999999999999999999864432221111000 0000000
Q ss_pred ---CCccccccccccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHHH
Q 004345 665 ---NNVIDLVDPLISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVS 710 (760)
Q Consensus 665 ---~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~ 710 (760)
......................+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 302 (350)
T d1q5ka_ 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302 (350)
T ss_dssp --CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000000000000011112345778889999999999999999986
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=4.4e-28 Score=260.92 Aligned_cols=215 Identities=18% Similarity=0.219 Sum_probs=143.9
Q ss_pred ccccccccccccCCceeEEEEEec-CCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeC------C
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKLQ-DGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER------E 564 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~------~ 564 (760)
.++|++.++||+|+||+||+|+.. +++.||||++.... ....+++.+|+.++++++|||||++++++... .
T Consensus 16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~ 95 (355)
T d2b1pa1 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 95 (355)
T ss_dssp ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence 368999999999999999999964 68999999997542 23345789999999999999999999999643 5
Q ss_pred eeEEEEeccCCCChhhh-----------------------------------------------hccccceeEecCCCcc
Q 004345 565 ENMLIYEYMPNKSLDSF-----------------------------------------------LFDFGLARIFGGNQDQ 597 (760)
Q Consensus 565 ~~~lV~Ey~~~gsL~~~-----------------------------------------------L~DFGla~~~~~~~~~ 597 (760)
..|+||||+.++.+... ++|||+++......
T Consensus 96 ~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~-- 173 (355)
T d2b1pa1 96 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-- 173 (355)
T ss_dssp EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred eeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccccc--
Confidence 78999999987765443 13899888654322
Q ss_pred cccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHH---------HH-------HHh
Q 004345 598 AATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLG---------YA-------WKL 661 (760)
Q Consensus 598 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~---------~~-------~~~ 661 (760)
......+|+.|+|||++.+..+++++||||+||+++||++|+.||............. +. ...
T Consensus 174 -~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 252 (355)
T d2b1pa1 174 -MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 252 (355)
T ss_dssp --------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHH
T ss_pred -ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHH
Confidence 2334678999999999999999999999999999999999999986432211110000 00 000
Q ss_pred ccCC------CccccccccccCC---CCHHHHHHHHHHHHhcccCCcCCCCCHHHHHHH
Q 004345 662 WNDN------NVIDLVDPLISES---GFKMEIIRCVNVGLLCVQEFVKDRPNMPTVVSM 711 (760)
Q Consensus 662 ~~~~------~~~~~~d~~l~~~---~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~~ 711 (760)
.... ............. ........+.+++.+||+.||++|||++|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 0000111111010 112234678899999999999999999999863
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=4.3e-27 Score=252.59 Aligned_cols=217 Identities=18% Similarity=0.231 Sum_probs=147.6
Q ss_pred ccccccccccccCCceeEEEEEe-cCCcEEEEEEecccC--ccchHhHHHHHHHHhcCCCCccceeeeEEEeC-----Ce
Q 004345 494 TNNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKAS--GQGQEEFMNEVMVISNLQHRNLVRLLGCCVER-----EE 565 (760)
Q Consensus 494 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~-----~~ 565 (760)
.++|++.++||+|+||+||+|+. .+++.||||++++.. ....+++.+|+++|++++|||||++++++... ..
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~ 96 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 96 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence 56899999999999999999995 579999999997543 23446789999999999999999999998643 34
Q ss_pred eEEEEeccCCCChhhhh-------------------------------------------------ccccceeEecCCCc
Q 004345 566 NMLIYEYMPNKSLDSFL-------------------------------------------------FDFGLARIFGGNQD 596 (760)
Q Consensus 566 ~~lV~Ey~~~gsL~~~L-------------------------------------------------~DFGla~~~~~~~~ 596 (760)
.++++||+.+|+|.+++ +|||++....
T Consensus 97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~---- 172 (348)
T d2gfsa1 97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 172 (348)
T ss_dssp CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCT----
T ss_pred eEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccC----
Confidence 46777888999998873 3888886542
Q ss_pred ccccceeeeeccccCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcccccccHHHHHHHh-----ccCCC---c
Q 004345 597 QAATKRLVGTYGYMSPEYAMEGR-FSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELTLLGYAWKL-----WNDNN---V 667 (760)
Q Consensus 597 ~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~~~~~~~~~-----~~~~~---~ 667 (760)
.......||+.|+|||.+.... ++.++||||+||++|||++|+.||...........+...... ..... .
T Consensus 173 -~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 251 (348)
T d2gfsa1 173 -DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 251 (348)
T ss_dssp -GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHH
T ss_pred -cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhh
Confidence 2223467899999999877654 689999999999999999999998643322111111000000 00000 0
Q ss_pred ccccccccc-CCCCH-----HHHHHHHHHHHhcccCCcCCCCCHHHHHH--HHhcc
Q 004345 668 IDLVDPLIS-ESGFK-----MEIIRCVNVGLLCVQEFVKDRPNMPTVVS--MLNSE 715 (760)
Q Consensus 668 ~~~~d~~l~-~~~~~-----~~~~~~~~l~~~Cl~~~P~~RPt~~ev~~--~L~~~ 715 (760)
......... ..... .....+.+++.+||+.||++|||+.|+++ .+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~ 307 (348)
T d2gfsa1 252 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307 (348)
T ss_dssp HHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred hhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence 000000000 00000 11245778999999999999999999987 35443
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=5.9e-24 Score=229.09 Aligned_cols=227 Identities=15% Similarity=0.173 Sum_probs=150.4
Q ss_pred cccccccccccCCceeEEEEEe-cCCcEEEEEEecccCccchHhHHHHHHHHhcCC-----------CCccceeeeEEEe
Q 004345 495 NNFQLANKLGQGGFGPVYKGKL-QDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-----------HRNLVRLLGCCVE 562 (760)
Q Consensus 495 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~nIv~l~g~~~~ 562 (760)
++|++.++||+|+||+||+|+. .+++.||||++++.. ...+.+.+|+.++++++ |+|||++++++..
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~ 91 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 91 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence 3599999999999999999996 578999999997542 23467888999888775 5789999998865
Q ss_pred C--CeeEEEEeccCCCChhhh-----------------------------------------------------------
Q 004345 563 R--EENMLIYEYMPNKSLDSF----------------------------------------------------------- 581 (760)
Q Consensus 563 ~--~~~~lV~Ey~~~gsL~~~----------------------------------------------------------- 581 (760)
. ...+++++++..+.....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~ 171 (362)
T d1q8ya_ 92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQI 171 (362)
T ss_dssp EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred ccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccccccee
Confidence 3 455677776654432111
Q ss_pred -hccccceeEecCCCcccccceeeeeccccCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCccccccc----HHH
Q 004345 582 -LFDFGLARIFGGNQDQAATKRLVGTYGYMSPEYAMEGRFSEKSDVFSFGVLLLEIVSGRKNTSFYHEEFELT----LLG 656 (760)
Q Consensus 582 -L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSfGv~l~ElltG~~p~~~~~~~~~~~----~~~ 656 (760)
|+|||.++.... .....+||+.|+|||.+....++.++||||+||+++||++|+.||.......... +..
T Consensus 172 kl~dfg~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~ 246 (362)
T d1q8ya_ 172 KIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 246 (362)
T ss_dssp EECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred eEeeccccccccc-----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence 138888876432 2234679999999999999999999999999999999999999986432211111 111
Q ss_pred HHHHh-----------------ccCCCccccccc----------cccCCCCHHHHHHHHHHHHhcccCCcCCCCCHHHHH
Q 004345 657 YAWKL-----------------WNDNNVIDLVDP----------LISESGFKMEIIRCVNVGLLCVQEFVKDRPNMPTVV 709 (760)
Q Consensus 657 ~~~~~-----------------~~~~~~~~~~d~----------~l~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ev~ 709 (760)
..... .........+.. .............+.+++.+|++.||++|||++|++
T Consensus 247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L 326 (362)
T d1q8ya_ 247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 326 (362)
T ss_dssp HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 10000 000000000000 011223455667889999999999999999999998
Q ss_pred HH--Hhccc--cCCCCCCCCce
Q 004345 710 SM--LNSEI--KDLPAAKQPAF 727 (760)
Q Consensus 710 ~~--L~~~~--~~~~~p~~p~~ 727 (760)
+. +++.. +++..|..|..
T Consensus 327 ~Hp~f~~~~~~~~~~~p~~~~~ 348 (362)
T d1q8ya_ 327 NHPWLKDTLGMEEIRVPDRELY 348 (362)
T ss_dssp TCGGGTTCTTCTTCCCTTSCTT
T ss_pred cCcccCCCCCcccCCCCCcccC
Confidence 84 54332 23444444444
|
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Gastrodianin (antifungal protein) species: Gastrodia elata [TaxId: 91201]
Probab=99.83 E-value=2.1e-20 Score=164.73 Aligned_cols=112 Identities=24% Similarity=0.425 Sum_probs=93.0
Q ss_pred cccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEE
Q 004345 24 TDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVV 103 (760)
Q Consensus 24 ~dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l 103 (760)
+|||.|||.|..|++|+| |.|+|.|...| + |.|++. .++||.||++.|. .++.|.|+.||+|+|
T Consensus 1 tDtL~~gq~L~~g~~l~~--g~~~l~~q~DG-N-----Lvly~~------~~~vW~s~~~~~~--~~~~l~l~~dGnLvl 64 (112)
T d1xd5a_ 1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDC-N-----LVLYDN------NRAVWASGTNGKA--SGCVLKMQNDGNLVI 64 (112)
T ss_dssp CCEEETTEEECTTCEEEE--TTEEEEECTTS-C-----EEEEET------TEEEEECCCTTSC--SSEEEEECTTSCEEE
T ss_pred CCEecCCCEecCCCEEEE--CCEEEEEcCCC-C-----EEEEcC------CcEEEEccCccCC--CCcEEEEeccccEEE
Confidence 589999999999999975 88999999876 4 566543 4799999999884 457899999999999
Q ss_pred EcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcc
Q 004345 104 LNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTD 155 (760)
Q Consensus 104 ~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTD 155 (760)
.|+ +..+|++++.... +..+|+|+|+|||||++. ++.++|||+.+|+|
T Consensus 65 ~~~-~~~~w~s~t~~~~--~~~~l~L~ddGNlvly~~-~~~~~W~S~t~~~n 112 (112)
T d1xd5a_ 65 YSG-SRAIWASNTNRQN--GNYYLILQRDRNVVIYDN-SNNAIWATHTNVGN 112 (112)
T ss_dssp EET-TEEEEECCCCCSC--CCCEEEECTTSCEEEECT-TSCEEEECCCCCCC
T ss_pred Eec-CCeEEEEeeccCC--CceEEEEcCCCCEEEECC-CCcEEecCCCccCC
Confidence 997 4567777765433 457899999999999997 46789999999986
|
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Garlic (Allium sativum) [TaxId: 4682]
Probab=99.80 E-value=1.8e-19 Score=157.17 Aligned_cols=107 Identities=20% Similarity=0.289 Sum_probs=89.8
Q ss_pred ccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEEE
Q 004345 25 DTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVL 104 (760)
Q Consensus 25 dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l~ 104 (760)
|+|.+||.|..|++|.+ |.|.|+|...+ + |.++. . .++||+||++.|+. ..+.|.|+.||+|+|.
T Consensus 2 ~~L~~g~~L~~g~~l~~--g~~~l~~q~dg-n-----Lvl~~-~-----~~~vW~ant~~~~~-~~~~l~l~~dGnLvl~ 66 (109)
T d1kj1a_ 2 NLLTNGEGLYAGQSLDV--EPYHFIMQEDC-N-----LVLYD-H-----STSVWASNTGILGK-KGCKAVLQSDGNFVVY 66 (109)
T ss_dssp CEEETTCEEETTCEEEE--TTEEEEECTTS-C-----EEEEE-T-----TEEEEECCCCCTTC-CCCEEEECTTSCEEEE
T ss_pred CCccCCCEEeCCCEEEe--CCEEEEecCCC-e-----EEEEe-C-----CEEEEEeCCCCCCc-eeEEEEEcCCceEEEE
Confidence 78999999999999974 88999998766 3 55543 2 47899999999975 4678999999999999
Q ss_pred cCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCC
Q 004345 105 NGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQE 152 (760)
Q Consensus 105 d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~ 152 (760)
|++|.++|+|++.... +...|.|+|+|||||+++ .+|||+-|
T Consensus 67 ~~~g~~vW~s~t~~~~--~~~~l~L~ddGNlvly~~----~~W~S~t~ 108 (109)
T d1kj1a_ 67 DAEGRSLWASHSVRGN--GNYVLVLQEDGNVVIYGS----DIWSTGTY 108 (109)
T ss_dssp CSSSCEEEECCCCCCS--SCCEEEECTTSCEEEECC----EEEECCCC
T ss_pred eCCCcEEEEEeeECCC--CCEEEEEeCCCcEEEECC----CEecCCCc
Confidence 9999999999976443 456899999999999964 49999854
|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Snowdrop (Galanthus nivalis) [TaxId: 4670]
Probab=99.80 E-value=1.3e-19 Score=158.10 Aligned_cols=106 Identities=21% Similarity=0.302 Sum_probs=90.3
Q ss_pred ccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEEE
Q 004345 25 DTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVL 104 (760)
Q Consensus 25 dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l~ 104 (760)
|+|.+||.|..|++|. +|.|+|.|+.+| + |.|+.. .++||.||++.|. ..+.|.+..+|+|+|.
T Consensus 2 ~~L~~g~~L~~G~~l~--ng~~~l~~q~DG-N-----Lvly~~------~~~vW~s~~~~~~--~~~~l~l~~~Gnlvl~ 65 (108)
T d1jpca_ 2 NILYSGETLSTGEFLN--YGSFVFIMQEDC-N-----LVLYDV------DKPIWATNTGGLS--RSCFLSMQTDGNLVVY 65 (108)
T ss_dssp CEEETTEEECTTCEEE--ETTEEEEECTTS-C-----EEEEET------TEEEEECCCTTSC--SSCEEEECTTSCEEEE
T ss_pred CCccCCCEecCCCEEE--cCCEEEEECCCC-e-----EEEEeC------CceeeEeCCCCCC--CccEEEEeccceEEEE
Confidence 7899999999999995 699999999887 4 667643 3789999999983 4578999999999999
Q ss_pred cCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCC
Q 004345 105 NGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQE 152 (760)
Q Consensus 105 d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~ 152 (760)
|++|.++|+|++.... ...+|.|+|+|||||++. .+||||+|
T Consensus 66 ~~~g~~vWsS~t~~~~--~~~~l~L~ddGNlVly~~----~~W~S~t~ 107 (108)
T d1jpca_ 66 NPSNKPIWASNTGGQN--GNYVCILQKDRNVVIYGT----DRWATGTH 107 (108)
T ss_dssp CTTCCEEEECCCCCSC--SCEEEEECTTSCEEEEEC----CCCCCCCC
T ss_pred CCCccceEEccccCCC--CcEEEEEcCCCCEEEeCC----CcccCCCC
Confidence 9999999999976543 345789999999999975 48999987
|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=99.64 E-value=1.8e-16 Score=140.21 Aligned_cols=103 Identities=21% Similarity=0.327 Sum_probs=84.8
Q ss_pred EEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCC
Q 004345 63 GIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNIS 142 (760)
Q Consensus 63 gIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~ 142 (760)
-|||..+ +.++.+|++|++.|+.....+|.+..||||+|.+. +.++|++++.... ....|+|+|+|||||+|. +
T Consensus 11 ~il~~~~--~~~~~~~~l~~~q~l~~g~y~L~~q~DGNLvL~~~-~~~vW~s~t~~~~--~~~~~~l~~~GnLvl~d~-~ 84 (120)
T d1dlpa2 11 SILYSTQ--GNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAGKG--TGCRAVLQPNGRMDVLTN-Q 84 (120)
T ss_dssp EECCCC----CCCCCCEECSSCCCBCSSCEEEEETTTEEEEEBT-TBCCSCCCCCSSC--SSCEEEEETTTEEEEEET-T
T ss_pred eEEEcCC--CCCCcccEEcCCCeeEcCCEEEEEcCCCcEEEecC-CcEEEEEccccCC--CcEEEEEeCCeeEEEEcC-C
Confidence 5899876 88999999999999987777999999999999986 6688999876433 357899999999999998 5
Q ss_pred CceeeeecCCCcccccCCCcccccccCCccEEEEeecCCCCCCCcceEEeecCCCcceEE
Q 004345 143 QVSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVF 202 (760)
Q Consensus 143 ~~~lWQSFd~PTDTlLpg~~l~~~~~~g~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~ 202 (760)
+.+|||||. +.+.|.|.+.++++|...++
T Consensus 85 ~~~lW~S~t-------------------------------~~~~~~~~l~Lq~DGnlvlY 113 (120)
T d1dlpa2 85 NIAVWTSGN-------------------------------SRSAGRYVFVLQPDRNLAIY 113 (120)
T ss_dssp TEEEEECCC-------------------------------CCSSSCCEEEECSSSCEEEE
T ss_pred CCEEEEeCC-------------------------------CCCCCcEEEEECCCCcEEEe
Confidence 778999972 23567889999999986554
|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=99.56 E-value=1.3e-14 Score=127.57 Aligned_cols=104 Identities=17% Similarity=0.342 Sum_probs=82.5
Q ss_pred cccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEE
Q 004345 24 TDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVV 103 (760)
Q Consensus 24 ~dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l 103 (760)
.+||.++|+| ...+..|.|.|.|...| + |.+ |.. .++||.||+..+. ....|.|..||+|+|
T Consensus 14 ~~~l~~~q~l----~~~~~~~~y~l~mQ~DG-N-----LVL-y~~-----~~~vWssnt~~~~--~~~~l~l~~dGnLvL 75 (119)
T d1b2pa_ 14 PQILHATESL----EILFGTHVYRFIMQTDC-N-----LVL-YDN-----NNPIWATNTGGLG--NGCRAVLQPDGVLVV 75 (119)
T ss_dssp CCEEETTCEE----EEEETTEEEEEEECTTS-C-----EEE-EET-----TEEEEECCCTTSC--SSCEEEECTTSCEEE
T ss_pred CCEEeCCCeE----EEecCCceEEEEECCCC-c-----EEE-EEC-----CeEEEEecCCCCC--cceEEEEEeCCCEEE
Confidence 4566666666 34778999999998887 4 444 432 4789999998873 457899999999999
Q ss_pred EcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecC
Q 004345 104 LNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQ 151 (760)
Q Consensus 104 ~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd 151 (760)
.|++|.+||++++.... +..+|+|+|+|||||++. ++|||-.
T Consensus 76 ~d~~g~~vWsS~t~~~~--~~~~l~Lq~DGNlvlYg~----~~W~S~T 117 (119)
T d1b2pa_ 76 ITNENVTVWQSPVAGKA--GHYVLVLQPDRNVVIYGD----ALWATQT 117 (119)
T ss_dssp ECTTCCEEEECSCCCCS--SCEEEEECTTSCEEEEES----EEEECCC
T ss_pred ECCCCcEEEECCCcCCC--CceEEEEcCCCCEEEECC----CEeccCC
Confidence 99999999999886543 356799999999999964 5999853
|
| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=99.54 E-value=2e-15 Score=131.94 Aligned_cols=110 Identities=25% Similarity=0.347 Sum_probs=89.5
Q ss_pred EEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCC
Q 004345 64 IWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQ 143 (760)
Q Consensus 64 Iw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~ 143 (760)
|||.-. +..+..|+.+.++++.....+|.+..||||||.++ +.++|++++... .+..+.|+|+|||||++. ++
T Consensus 3 ~~~~~~--~~~~~~~tl~~~~~l~~g~~~l~~q~DGNLvL~~~-~~~vW~s~t~~~---~~~~l~l~~dGNLvl~d~-~~ 75 (115)
T d1dlpa1 3 ILFGLS--HEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDS-DVRVWASNTAGA---TGCRAVLQSDGLLVILTA-QN 75 (115)
T ss_dssp CCBCSS--SSSCSCSCCCTTCEECSTTEEEEECTTSCEEEEES-SSEEECCCCCSC---SCCBCCBCSSSCBCCBCT-TT
T ss_pred EEEecC--CCCCCcceecCCCcEEcCCEEEEECCCCeEEEEcC-CeeEEEcccCCC---CceEEEEeccCCEEEEcc-CC
Confidence 677653 56677899999999987778999999999999985 678999997543 367899999999999998 56
Q ss_pred ceeeeecCCCcccccCCCcccccccCCccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCC
Q 004345 144 VSIWDSFQEPTDTFYSEMKVSTDLRTGKKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGP 216 (760)
Q Consensus 144 ~~lWQSFd~PTDTlLpg~~l~~~~~~g~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~ 216 (760)
.+||||+- +.+.|.|.+.|+++|...++ ..++|.+|+
T Consensus 76 ~~vWsS~t-------------------------------~~~~g~y~l~Lq~DGNlvlY-----~~~~Wssgt 112 (115)
T d1dlpa1 76 TIRWSSGT-------------------------------KGSIGNYVLVLQPDRTVTIY-----GPGLWDSGT 112 (115)
T ss_dssp CCSCCCCC-------------------------------CCCSSCCEEEECSSSCEEEE-----CSEEEECSC
T ss_pred CEEEEcCC-------------------------------CCCCCCEEEEECCCCcEEEe-----CCCeecCCC
Confidence 78999862 33678999999999986543 247999886
|
| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=99.28 E-value=2.4e-12 Score=112.11 Aligned_cols=98 Identities=22% Similarity=0.373 Sum_probs=76.0
Q ss_pred cccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEE
Q 004345 24 TDTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVV 103 (760)
Q Consensus 24 ~dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l 103 (760)
.+||.++++| .+|.|.|.|...| + |.++.. ..+||.+|...+ ..+.+.|..||+|||
T Consensus 14 ~~tl~~~~~l--------~~g~~~l~~q~DG-N-----LvL~~~------~~~vW~s~t~~~---~~~~l~l~~dGNLvl 70 (115)
T d1dlpa1 14 PQTLHAAQSL--------ELSSFRFTMQSDC-N-----LVLFDS------DVRVWASNTAGA---TGCRAVLQSDGLLVI 70 (115)
T ss_dssp CSCCCTTCEE--------CSTTEEEEECTTS-C-----EEEEES------SSEEECCCCCSC---SCCBCCBCSSSCBCC
T ss_pred cceecCCCcE--------EcCCEEEEECCCC-e-----EEEEcC------CeeEEEcccCCC---CceEEEEeccCCEEE
Confidence 3556655555 3577999998877 4 666532 368999997654 457899999999999
Q ss_pred EcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeec
Q 004345 104 LNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSF 150 (760)
Q Consensus 104 ~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSF 150 (760)
.|.++.+||++++.... +...++|+++|||||++. .+|+|-
T Consensus 71 ~d~~~~~vWsS~t~~~~--g~y~l~Lq~DGNlvlY~~----~~Wssg 111 (115)
T d1dlpa1 71 LTAQNTIRWSSGTKGSI--GNYVLVLQPDRTVTIYGP----GLWDSG 111 (115)
T ss_dssp BCTTTCCSCCCCCCCCS--SCCEEEECSSSCEEEECS----EEEECS
T ss_pred EccCCCEEEEcCCCCCC--CCEEEEECCCCcEEEeCC----CeecCC
Confidence 99999999999886544 456799999999999954 599984
|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Fetuin-binding protein Scafet precursor species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=98.96 E-value=9.1e-10 Score=96.43 Aligned_cols=97 Identities=20% Similarity=0.334 Sum_probs=71.2
Q ss_pred ccccCCCcccCCCeEEeCCCeEEEeecCCCCCCCccEEEEEeecCCCCCCcEEEEccCCCCCCCCCcEEEEecCccEEEE
Q 004345 25 DTITSSQFIRDPESIISSGSKFKLGFFSPDGNFTNRYIGIWYNKGGSANKTVVWVANRNKPLIDSSGIFTISEDGNLVVL 104 (760)
Q Consensus 25 dti~~g~~l~~~~~lvS~~g~F~lGFf~~~~~~~~~ylgIw~~~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~L~l~ 104 (760)
+++.++|+|. .|.|.|.|-..| + |.|+.. ..+||.+|.... +....+.|..+|+|||.
T Consensus 24 ~~l~~~q~l~--------~g~y~L~~q~DG-N-----LvL~~~------~~~vW~s~t~~~--~~~~~~~l~~~GnLvl~ 81 (120)
T d1dlpa2 24 QTLHATQSLQ--------LSPYRLSMETDC-N-----LVLFDR------DDRVWSTNTAGK--GTGCRAVLQPNGRMDVL 81 (120)
T ss_dssp CEECSSCCCB--------CSSCEEEEETTT-E-----EEEEBT------TBCCSCCCCCSS--CSSCEEEEETTTEEEEE
T ss_pred cEEcCCCeeE--------cCCEEEEEcCCC-c-----EEEecC------CcEEEEEccccC--CCcEEEEEeCCeeEEEE
Confidence 4555566554 355888776554 2 555422 367899885443 45578999999999999
Q ss_pred cCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeee
Q 004345 105 NGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDS 149 (760)
Q Consensus 105 d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQS 149 (760)
|.++.++|+|++.... +..++.|+++|||||++. .+|.|
T Consensus 82 d~~~~~lW~S~t~~~~--~~~~l~Lq~DGnlvlY~~----~~W~t 120 (120)
T d1dlpa2 82 TNQNIAVWTSGNSRSA--GRYVFVLQPDRNLAIYGG----ALWTT 120 (120)
T ss_dssp ETTTEEEEECCCCCSS--SCCEEEECSSSCEEEECC----CCCBC
T ss_pred cCCCCEEEEeCCCCCC--CcEEEEECCCCcEEEeCC----CcccC
Confidence 9999999999986544 356799999999999954 48975
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.93 E-value=2.2e-10 Score=109.90 Aligned_cols=79 Identities=18% Similarity=0.168 Sum_probs=60.7
Q ss_pred ccccccccCCceeEEEEEecCCcEEEEEEecccCc------------------cchHhHHHHHHHHhcCCCCccceeeeE
Q 004345 498 QLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASG------------------QGQEEFMNEVMVISNLQHRNLVRLLGC 559 (760)
Q Consensus 498 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~------------------~~~~~f~~E~~~l~~l~H~nIv~l~g~ 559 (760)
.+.++||+|+||.||+|+..+|+.||||+++.... .....+.+|...+.++.|+++++.+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 45689999999999999988999999998753210 001234578889999999999998866
Q ss_pred EEeCCeeEEEEeccCCCChhh
Q 004345 560 CVEREENMLIYEYMPNKSLDS 580 (760)
Q Consensus 560 ~~~~~~~~lV~Ey~~~gsL~~ 580 (760)
. ..+++|||+++..+..
T Consensus 83 ~----~~~lvme~~~~~~~~~ 99 (191)
T d1zara2 83 E----GNAVLMELIDAKELYR 99 (191)
T ss_dssp E----TTEEEEECCCCEEGGG
T ss_pred c----CCEEEEEeeccccccc
Confidence 3 2379999999877654
|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Bluebell (Scilla campanulata) [TaxId: 81759]
Probab=98.81 E-value=1.2e-08 Score=88.74 Aligned_cols=85 Identities=25% Similarity=0.445 Sum_probs=65.1
Q ss_pred EEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCcccccccCCc
Q 004345 92 IFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTGK 171 (760)
Q Consensus 92 ~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~~~g~ 171 (760)
+|.+..||||||.++ +.++|++++.+.. ..+.+.|.++|||||.|. ++.+||+|. |
T Consensus 33 ~l~mQ~DGNLVLy~~-~~~vWssnt~~~~--~~~~l~l~~dGnLvL~d~-~g~~vWsS~-----t--------------- 88 (119)
T d1b2pa_ 33 RFIMQTDCNLVLYDN-NNPIWATNTGGLG--NGCRAVLQPDGVLVVITN-ENVTVWQSP-----V--------------- 88 (119)
T ss_dssp EEEECTTSCEEEEET-TEEEEECCCTTSC--SSCEEEECTTSCEEEECT-TCCEEEECS-----C---------------
T ss_pred EEEECCCCcEEEEEC-CeEEEEecCCCCC--cceEEEEEeCCCEEEECC-CCcEEEECC-----C---------------
Confidence 578889999999976 5589999986543 357899999999999998 467899862 1
Q ss_pred cEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCC
Q 004345 172 KVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGP 216 (760)
Q Consensus 172 ~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~ 216 (760)
.-+.|.|.+.|+.+|...++ ..+.|.+++
T Consensus 89 -----------~~~~~~~~l~Lq~DGNlvlY-----g~~~W~S~T 117 (119)
T d1b2pa_ 89 -----------AGKAGHYVLVLQPDRNVVIY-----GDALWATQT 117 (119)
T ss_dssp -----------CCCSSCEEEEECTTSCEEEE-----ESEEEECCC
T ss_pred -----------cCCCCceEEEEcCCCCEEEE-----CCCEeccCC
Confidence 11346788999999986654 246898875
|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Snowdrop (Galanthus nivalis) [TaxId: 4670]
Probab=98.78 E-value=1.7e-08 Score=86.48 Aligned_cols=86 Identities=26% Similarity=0.458 Sum_probs=64.7
Q ss_pred cEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCcccccccCC
Q 004345 91 GIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTG 170 (760)
Q Consensus 91 ~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~~~g 170 (760)
-+|.+..||||||.+. +.+||++++.... ....+.|.++|||||++. ++.+||+| +|
T Consensus 21 ~~l~~q~DGNLvly~~-~~~vW~s~~~~~~--~~~~l~l~~~Gnlvl~~~-~g~~vWsS-----~t-------------- 77 (108)
T d1jpca_ 21 FVFIMQEDCNLVLYDV-DKPIWATNTGGLS--RSCFLSMQTDGNLVVYNP-SNKPIWAS-----NT-------------- 77 (108)
T ss_dssp EEEEECTTSCEEEEET-TEEEEECCCTTSC--SSCEEEECTTSCEEEECT-TCCEEEEC-----CC--------------
T ss_pred EEEEECCCCeEEEEeC-CceeeEeCCCCCC--CccEEEEeccceEEEECC-CccceEEc-----cc--------------
Confidence 5788999999999985 5689999986543 356899999999999998 56789986 11
Q ss_pred ccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCC
Q 004345 171 KKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGP 216 (760)
Q Consensus 171 ~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~ 216 (760)
....+.|.+.|+.+|...++ . .+.|.++.
T Consensus 78 ------------~~~~~~~~l~L~ddGNlVly---~--~~~W~S~t 106 (108)
T d1jpca_ 78 ------------GGQNGNYVCILQKDRNVVIY---G--TDRWATGT 106 (108)
T ss_dssp ------------CCSCSCEEEEECTTSCEEEE---E--CCCCCCCC
T ss_pred ------------cCCCCcEEEEEcCCCCEEEe---C--CCcccCCC
Confidence 12346788889999876554 2 35787764
|
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Garlic (Allium sativum) [TaxId: 4682]
Probab=98.75 E-value=3.3e-08 Score=84.75 Aligned_cols=88 Identities=26% Similarity=0.464 Sum_probs=65.8
Q ss_pred cEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCcccccccCC
Q 004345 91 GIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTG 170 (760)
Q Consensus 91 ~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~~~g 170 (760)
-.|.+..||||+|.+ .+.+||++|+.... .....+.|.++|||||+|. ++.++|+| +|
T Consensus 21 ~~l~~q~dgnLvl~~-~~~~vW~ant~~~~-~~~~~l~l~~dGnLvl~~~-~g~~vW~s-----~t-------------- 78 (109)
T d1kj1a_ 21 YHFIMQEDCNLVLYD-HSTSVWASNTGILG-KKGCKAVLQSDGNFVVYDA-EGRSLWAS-----HS-------------- 78 (109)
T ss_dssp EEEEECTTSCEEEEE-TTEEEEECCCCCTT-CCCCEEEECTTSCEEEECS-SSCEEEEC-----CC--------------
T ss_pred EEEEecCCCeEEEEe-CCEEEEEeCCCCCC-ceeEEEEEcCCceEEEEeC-CCcEEEEE-----ee--------------
Confidence 578888999999987 45789999986433 2356799999999999998 57789987 11
Q ss_pred ccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCCC
Q 004345 171 KKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGPW 217 (760)
Q Consensus 171 ~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~~ 217 (760)
..+.|.|.+.|+++|...++ . .+.|.++++
T Consensus 79 ------------~~~~~~~~l~L~ddGNlvly---~--~~~W~S~t~ 108 (109)
T d1kj1a_ 79 ------------VRGNGNYVLVLQEDGNVVIY---G--SDIWSTGTY 108 (109)
T ss_dssp ------------CCCSSCCEEEECTTSCEEEE---C--CEEEECCCC
T ss_pred ------------ECCCCCEEEEEeCCCcEEEE---C--CCEecCCCc
Confidence 11346788999999876553 2 368988764
|
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Gastrodianin (antifungal protein) species: Gastrodia elata [TaxId: 91201]
Probab=98.34 E-value=1.7e-06 Score=74.38 Aligned_cols=88 Identities=25% Similarity=0.424 Sum_probs=64.2
Q ss_pred cEEEEecCccEEEEcCCCCEEEecCCCCCcCCCCceEEEecCCCEEEEeCCCCceeeeecCCCcccccCCCcccccccCC
Q 004345 91 GIFTISEDGNLVVLNGKKQVHWSSNVSSLANNSNTRAQLLDSGNLVLHDNISQVSIWDSFQEPTDTFYSEMKVSTDLRTG 170 (760)
Q Consensus 91 ~~l~l~~~G~L~l~d~~~~~vWst~~~~~~~~~~~~a~LldsGNlVl~~~~~~~~lWQSFd~PTDTlLpg~~l~~~~~~g 170 (760)
-.|.+..||||||.+. +.+||++++.... ..+.+.|..+|||||++. +..+|.|
T Consensus 21 ~~l~~q~DGNLvly~~-~~~vW~s~~~~~~--~~~~l~l~~dGnLvl~~~--~~~~w~s--------------------- 74 (112)
T d1xd5a_ 21 YLFIIQNDCNLVLYDN-NRAVWASGTNGKA--SGCVLKMQNDGNLVIYSG--SRAIWAS--------------------- 74 (112)
T ss_dssp EEEEECTTSCEEEEET-TEEEEECCCTTSC--SSEEEEECTTSCEEEEET--TEEEEEC---------------------
T ss_pred EEEEEcCCCCEEEEcC-CcEEEEccCccCC--CCcEEEEeccccEEEEec--CCeEEEE---------------------
Confidence 5788999999999874 6789999876533 357899999999999986 3456654
Q ss_pred ccEEEEeecCCCCCCCcceEEeecCCCcceEEEEEcCCcceeecCC
Q 004345 171 KKVQLTSWRSLSNPSIGSFSAGLDSFTIPEVFIWINGTRPYWRSGP 216 (760)
Q Consensus 171 ~~~~L~S~~s~~dps~G~~~l~~~~~~~~~~~~~~~~~~~yw~~g~ 216 (760)
.+.-..|.|.+.|+.+|...++ .....+.|.++.
T Consensus 75 ----------~t~~~~~~~~l~L~ddGNlvly--~~~~~~~W~S~t 108 (112)
T d1xd5a_ 75 ----------NTNRQNGNYYLILQRDRNVVIY--DNSNNAIWATHT 108 (112)
T ss_dssp ----------CCCCSCCCCEEEECTTSCEEEE--CTTSCEEEECCC
T ss_pred ----------eeccCCCceEEEEcCCCCEEEE--CCCCcEEecCCC
Confidence 1112346788999999876554 233467898875
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=92.95 E-value=0.14 Score=49.00 Aligned_cols=93 Identities=11% Similarity=0.000 Sum_probs=66.6
Q ss_pred HHHHHhccccccccccccCCceeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCC-CCccceeeeEEEeCCee
Q 004345 488 EELANATNNFQLANKLGQGGFGPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ-HRNLVRLLGCCVEREEN 566 (760)
Q Consensus 488 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~nIv~l~g~~~~~~~~ 566 (760)
.|+......|++.+..+-++.+.||+... +++.+.||+...........+.+|...+..+. |--+.+++.+...++..
T Consensus 7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~ 85 (263)
T d1j7la_ 7 PELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS 85 (263)
T ss_dssp HHHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred HHHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCce
Confidence 34555556777666655455578998875 45667788876554445556788998887664 44467888888888999
Q ss_pred EEEEeccCCCChhhh
Q 004345 567 MLIYEYMPNKSLDSF 581 (760)
Q Consensus 567 ~lV~Ey~~~gsL~~~ 581 (760)
++|||++++..+...
T Consensus 86 ~lv~~~l~G~~~~~~ 100 (263)
T d1j7la_ 86 NLLMSEADGVLCSEE 100 (263)
T ss_dssp EEEEECCSSEEHHHH
T ss_pred EEEEEeccccccccc
Confidence 999999998877543
|
| >d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Fibrillin-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.93 E-value=0.017 Score=36.08 Aligned_cols=32 Identities=38% Similarity=0.838 Sum_probs=26.0
Q ss_pred CCCcCCCccCCCccccCC-CCCcccccCCCccCC
Q 004345 289 NDCDVYGKCGAFGSCNSQ-KIPICSCLLGFEPKN 321 (760)
Q Consensus 289 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~gf~~~~ 321 (760)
|.|.+.+.|| ||-|+.- +.-.|.|-.||+|..
T Consensus 2 dECsignpCG-nGTCtNviGgFec~C~~GFepgp 34 (39)
T d1emoa2 2 DECSVGNPCG-NGTCKNVIGGFECTCEEGFEPGP 34 (39)
T ss_dssp CGGGTTCSSS-SSCEEECSSSEEECCSSSSCCCS
T ss_pred CccccCCccC-CceeeecccceEEeecCCcCCCc
Confidence 6799999999 5899753 455799999999863
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=86.30 E-value=0.51 Score=44.47 Aligned_cols=76 Identities=20% Similarity=0.176 Sum_probs=54.8
Q ss_pred ccccCCc-eeEEEEEecCCcEEEEEEecccCccchHhHHHHHHHHhcCC--CCccceeeeEEEeCCeeEEEEeccCCCCh
Q 004345 502 KLGQGGF-GPVYKGKLQDGQEIAVKRLSKASGQGQEEFMNEVMVISNLQ--HRNLVRLLGCCVEREENMLIYEYMPNKSL 578 (760)
Q Consensus 502 ~lG~G~~-g~Vy~~~~~~~~~vavK~l~~~~~~~~~~f~~E~~~l~~l~--H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 578 (760)
.+..|.. +.||+...+.+..+++|..... ....+..|+..++.+. +-.+.++++++.+++..++|||++++.++
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~---~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~ 93 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 93 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCcc---CHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence 3444443 6799998888888888976433 2345677888777663 33467788888888889999999998766
Q ss_pred hh
Q 004345 579 DS 580 (760)
Q Consensus 579 ~~ 580 (760)
..
T Consensus 94 ~~ 95 (255)
T d1nd4a_ 94 LS 95 (255)
T ss_dssp TT
T ss_pred cc
Confidence 43
|
| >d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: EGF-type module domain: Neurogenic locus notch homolog protein 1, Notch1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.39 E-value=0.2 Score=33.28 Aligned_cols=30 Identities=27% Similarity=0.755 Sum_probs=23.6
Q ss_pred CCCcC-CCccCCCccccCC-CCCcccccCCCc
Q 004345 289 NDCDV-YGKCGAFGSCNSQ-KIPICSCLLGFE 318 (760)
Q Consensus 289 ~~C~~-~~~CG~~g~C~~~-~~~~C~C~~gf~ 318 (760)
|.|.. ...|..+|.|... +.-.|.|++||+
T Consensus 4 deC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~ 35 (42)
T d2vj3a1 4 DECSLGANPCEHAGKCINTLGSFECQCLQGYT 35 (42)
T ss_dssp CTTTSSSCSSSTTCEEEECSSSEEEECCTTEE
T ss_pred ccccCCCCCCCCCcEeECCCCCEEeECCCCCc
Confidence 56875 5689999999754 346799999985
|