Citrus Sinensis ID: 004396
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 756 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ZVN2 | 704 | Acyltransferase-like prot | yes | no | 0.911 | 0.978 | 0.619 | 0.0 | |
| Q9LW26 | 701 | Acyltransferase-like prot | no | no | 0.798 | 0.861 | 0.508 | 1e-174 |
| >sp|Q9ZVN2|Y1457_ARATH Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana GN=At1g54570 PE=1 SV=1 | Back alignment and function desciption |
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Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/704 (61%), Positives = 541/704 (76%), Gaps = 15/704 (2%)
Query: 56 VSPSFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGALIDVGNGTL 115
V P+ ++S + +F+ RAQ + G + S + NG +N + NG
Sbjct: 10 VLPNLRLSSNQRRNFKVRAQ-ISGENKKATSLEPVNNNGSVSLSTTVQNQKGANEVNG-- 66
Query: 116 KPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRP 175
K K + ++S+E+E+LWDDGYG+ SVKDY AAKEI+K DGGPPRWF PVDCGRP
Sbjct: 67 -----KGKSKRKIVSDEIELLWDDGYGSKSVKDYFAAAKEILKADGGPPRWFSPVDCGRP 121
Query: 176 LKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRRE 235
++ +PTLLFLPG+DG G+GL+ HHK LGKAF V CLHIPV DRTPFEGL+K VE+ +R+E
Sbjct: 122 VEDAPTLLFLPGMDGTGMGLVPHHKALGKAFHVSCLHIPVLDRTPFEGLLKVVEDVLRQE 181
Query: 236 HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP 295
A+ P KPIYLVGDSFGGCLALAVAARN ++DL+LIL NPATSF RS LQPL PIL+ +P
Sbjct: 182 QATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFDRSPLQPLLPILEMVP 241
Query: 296 DELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLP-ALLPRLSVMSDIIPK 354
+ELH VPY LS++MGDPIKMA + I+N+LP +K+E+L L +LP LS + IIP+
Sbjct: 242 EELHFTVPYALSFIMGDPIKMATLGIDNQLPTGVKIEKLRQRLTKTMLPLLSELGGIIPR 301
Query: 355 DTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNF 414
+TLLWKLKLL+S AYANSR+HAV+AEVLVLASGKD MLPS++EAKRL+ L+NC VR F
Sbjct: 302 ETLLWKLKLLRSGCAYANSRIHAVQAEVLVLASGKDMMLPSQEEAKRLHGLLKNCSVRCF 361
Query: 415 KDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQVVGLLRVAS 474
KDNGHTLLLE+ ISLLT+IKGT KYRRS + D V+DFLPPS+ E YA D+V+G LR A
Sbjct: 362 KDNGHTLLLEDSISLLTVIKGTGKYRRSWRYDLVSDFLPPSKGELAYALDEVLGFLRNAV 421
Query: 475 SSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHP 534
SV ST+EDGKIVKGLAGVP++GPVLLVGYHML+G EL + E F++EKNI+ G+AHP
Sbjct: 422 GSVFFSTMEDGKIVKGLAGVPDKGPVLLVGYHMLMGLELGPMSEAFIKEKNILFRGMAHP 481
Query: 535 EIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGGAREALHYKGEE 594
++ + + F DW+KV GA PV A NLFKLL +KSHVLL+PGGAREALH +GE+
Sbjct: 482 VLYSD--NDPAKAFDYGDWIKVFGAYPVTATNLFKLLDSKSHVLLFPGGAREALHNRGEQ 539
Query: 595 YKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLMSIPVINDCVRELARDT 654
YKL WPEQQEFVRMAARFGATIVPFG VGEDDIA+LVLDY DLM IP++ND + E+ RDT
Sbjct: 540 YKLIWPEQQEFVRMAARFGATIVPFGTVGEDDIAELVLDYNDLMKIPILNDYITEVTRDT 599
Query: 655 --VNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENANELYLH 712
+R+++ GEVANQ L+ PGL+PKVPGRFYYLFGKPI+TKGR +KDKE AN++YL
Sbjct: 600 KQFKLREESEGEVANQPLYLPGLIPKVPGRFYYLFGKPIETKGRPELVKDKEEANQVYLE 659
Query: 713 IKSQVERCLDYLLKKREEDPYRNIIDRTAYRAVY--GDEVPTFK 754
+K++VE + YLLKKREEDPYR+++DR Y + VP+F+
Sbjct: 660 VKAEVENSIAYLLKKREEDPYRSVLDRLNYSLTHTTATHVPSFE 703
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: - |
| >sp|Q9LW26|Y3684_ARATH Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 613 bits (1581), Expect = e-174, Method: Compositional matrix adjust.
Identities = 316/621 (50%), Positives = 421/621 (67%), Gaps = 17/621 (2%)
Query: 146 VKDYLDAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKA 205
+ D+L+ A+E + GGPPRWF P++CG SP LL+LPGIDG GLGLI HHK LG+
Sbjct: 87 LSDFLEEAREFVGDGGGPPRWFSPLECGAQATNSPLLLYLPGIDGTGLGLIRHHKKLGEI 146
Query: 206 FEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT 265
F++ CLHIPV DRTP + LVK +EETV+ E+ P +PIYLVG+S G CLAL VAARNP
Sbjct: 147 FDIWCLHIPVSDRTPVKDLVKLIEETVKSENFRLPNRPIYLVGESIGACLALDVAARNPN 206
Query: 266 IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVP--YLLSYVMGDPIKMAMVNIEN 323
IDL LIL NPAT +QPL +L +PD L + + + GDP+ + + N
Sbjct: 207 IDLSLILVNPATHVNNFMVQPLSGMLNVLPDGLPTLLEDIFDFGFKQGDPLTGMLDALSN 266
Query: 324 RLPPRIKLEQLSN-------NLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH 376
++++ ++ A+ L +S + PKDTLLWKL++LK A A NS ++
Sbjct: 267 EF----SVQRMGGVGGGMLRDVLAVSANLPTLSRMFPKDTLLWKLEMLKYAIASVNSHIY 322
Query: 377 AVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436
+V+AE L+L SG+D+ L E++ R + +L CIVR DNG LLE+G+ L TIIK T
Sbjct: 323 SVRAETLILLSGRDHWLLKEEDIDRYSRTLPKCIVRKLDDNGQFPLLEDGVDLATIIKCT 382
Query: 437 CKYRRSRKLDSVADFLPPSRQEFKYAFDQVVGLLRVASSSVMLSTLEDGKIVKGLAGVPN 496
C YRR + D + D++ P+ E K D LL +S VMLSTLEDG +V+ L G+P+
Sbjct: 383 CFYRRGKSHDHITDYIMPTTFELKQQVDDH-RLLMDGTSPVMLSTLEDGTVVRSLEGLPS 441
Query: 497 EGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKV 556
EGPVL VGYHM+LGFEL +V + + E+NI + G+AHP +F L++S + M D K+
Sbjct: 442 EGPVLYVGYHMILGFELAPMVIQLMTERNIHLRGLAHPMLF-KNLQDSLVDTKMFDKYKI 500
Query: 557 MGAVPVAARNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATI 616
MG VPV+ N++KLL K+HVLLYPGG REALH KGEEYKLFWPE+ EFVR+A++FGA I
Sbjct: 501 MGGVPVSHFNIYKLLREKAHVLLYPGGVREALHRKGEEYKLFWPERSEFVRVASKFGAKI 560
Query: 617 VPFGAVGEDDIADLVLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLL 676
VPFG VGEDDI ++VLD D +IP++ D + + +D NIR+ E+ NQ +FPGL+
Sbjct: 561 VPFGVVGEDDICEIVLDSNDQRNIPILKDLMEKATKDAGNIREGDESELGNQECYFPGLV 620
Query: 677 PKVPGRFYYLFGKPIQTKGREVSLKDKENANELYLHIKSQVERCLDYLLKKREEDPYRNI 736
PK+PGRFYY FGKPI+T G+E LKDKE A ELYL +KS+VE+C+DYL KRE DPYR++
Sbjct: 621 PKIPGRFYYYFGKPIETAGKEKELKDKEKAQELYLQVKSEVEQCIDYLKVKRESDPYRHL 680
Query: 737 IDRTAYRAVYG--DEVPTFKL 755
+ R Y+A +G E+PTF L
Sbjct: 681 LPRMLYQASHGWSSEIPTFDL 701
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 756 | ||||||
| 255542416 | 723 | catalytic, putative [Ricinus communis] g | 0.931 | 0.973 | 0.712 | 0.0 | |
| 224131374 | 724 | predicted protein [Populus trichocarpa] | 0.929 | 0.970 | 0.722 | 0.0 | |
| 224125508 | 689 | predicted protein [Populus trichocarpa] | 0.906 | 0.994 | 0.699 | 0.0 | |
| 359487917 | 711 | PREDICTED: acyltransferase-like protein | 0.933 | 0.992 | 0.708 | 0.0 | |
| 224125526 | 638 | predicted protein [Populus trichocarpa] | 0.837 | 0.992 | 0.729 | 0.0 | |
| 224131378 | 680 | predicted protein [Populus trichocarpa] | 0.865 | 0.961 | 0.711 | 0.0 | |
| 224125518 | 683 | predicted protein [Populus trichocarpa] | 0.896 | 0.992 | 0.638 | 0.0 | |
| 356571157 | 691 | PREDICTED: acyltransferase-like protein | 0.900 | 0.985 | 0.670 | 0.0 | |
| 356504086 | 703 | PREDICTED: acyltransferase-like protein | 0.921 | 0.991 | 0.665 | 0.0 | |
| 298204932 | 602 | unnamed protein product [Vitis vinifera] | 0.791 | 0.993 | 0.743 | 0.0 |
| >gi|255542416|ref|XP_002512271.1| catalytic, putative [Ricinus communis] gi|223548232|gb|EEF49723.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1048 bits (2709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/723 (71%), Positives = 600/723 (82%), Gaps = 19/723 (2%)
Query: 48 MASVINFPVSPSFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGAL 107
MASV++F VSP +++NS+ K + R QS+ G DST+LSSGS+AVNG E NGAL
Sbjct: 1 MASVVSFRVSPYYLLNSEIKPRLQVRVQSLDGSDSTMLSSGSVAVNGTSFIGRIENNGAL 60
Query: 108 ---------------IDVGNGTLKPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDA 152
ID GNG LK RVEKK+ VKNV S++ EVLWDDGYGT + KDYL+
Sbjct: 61 NGGSTTTKKEEGRVLIDGGNGRLKSRVEKKQ-VKNV-SQDFEVLWDDGYGTKTAKDYLEG 118
Query: 153 AKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLH 212
AKE+ + D GPPRWF P++ G+PLK SPTLLFLPG+DG+GLGL LHHK LGK FEV CLH
Sbjct: 119 AKEMNRLDDGPPRWFSPIESGQPLKDSPTLLFLPGLDGVGLGLTLHHKALGKVFEVWCLH 178
Query: 213 IPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILIL 272
IPVY+RTPFEGLVKFVEETVR EHA P+KPIYLVGDSFGGCLALAVAARNP IDL++IL
Sbjct: 179 IPVYNRTPFEGLVKFVEETVRLEHALFPDKPIYLVGDSFGGCLALAVAARNPKIDLVVIL 238
Query: 273 SNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLE 332
+NPATSFGRSQLQPL P+L+A P+ LH AVPYLLS+VMG+P+KMAMV++E LPPR+K+E
Sbjct: 239 ANPATSFGRSQLQPLLPVLEAFPEGLHNAVPYLLSFVMGNPLKMAMVDVEYILPPRLKIE 298
Query: 333 QLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNM 392
QLS NL ALLP LS ++DIIPKDTL+WKLKLLKSA+AY NSRLHAVKAEVLVLASG D M
Sbjct: 299 QLSGNLTALLPYLSGLADIIPKDTLVWKLKLLKSAAAYTNSRLHAVKAEVLVLASGADYM 358
Query: 393 LPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFL 452
LPS DEAKRL NSLQNCIVR+FKDNGHTLLLE+GI+LLTIIKGT KYRRSR++D V+DFL
Sbjct: 359 LPSADEAKRLKNSLQNCIVRHFKDNGHTLLLEDGINLLTIIKGTGKYRRSRRIDFVSDFL 418
Query: 453 PPSRQEFKYAFDQVVGLLRVASSSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFE 512
PPS EFK F ++ GLLR + + + STL+DG+IV+GLAGVPN+GPV+LVGYHML+G E
Sbjct: 419 PPSMSEFKRGFYEISGLLRFVTGAALFSTLDDGRIVRGLAGVPNKGPVILVGYHMLMGLE 478
Query: 513 LYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLS 572
LYSL EEFLREKNI + G+AHP I GRLE +NEF ++DW++VMGA+PV NLFKLLS
Sbjct: 479 LYSLYEEFLREKNIALRGLAHPIISNGRLEELTNEFSVSDWMQVMGALPVTPSNLFKLLS 538
Query: 573 TKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVL 632
TKSHVLLYPGGAREALHYKGE+YKLFWP+Q EFVRMAARFGATIVPFG+VGEDDIA+L L
Sbjct: 539 TKSHVLLYPGGAREALHYKGEQYKLFWPDQPEFVRMAARFGATIVPFGSVGEDDIAELAL 598
Query: 633 DYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQ 692
DY DLM IPV+ND +RE R + IRD ++GEV NQ LF PGLLPKVPGRFY+LFGKPI+
Sbjct: 599 DYNDLMKIPVLNDYIRESTRSAIRIRDPSQGEVGNQELFIPGLLPKVPGRFYFLFGKPIE 658
Query: 693 TKGREVSLKDKENANELYLHIKSQVERCLDYLLKKREEDPYRNIIDRTAYRAVYG--DEV 750
TKG+E LKDK ANELYL +KS+V+R +DYLLKKRE DPYR+IIDRT YRA+Y +EV
Sbjct: 659 TKGKEELLKDKGYANELYLQVKSEVKRNMDYLLKKRETDPYRSIIDRTLYRALYSPLNEV 718
Query: 751 PTF 753
P F
Sbjct: 719 PAF 721
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224131374|ref|XP_002328523.1| predicted protein [Populus trichocarpa] gi|222838238|gb|EEE76603.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1040 bits (2690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/725 (72%), Positives = 605/725 (83%), Gaps = 22/725 (3%)
Query: 48 MASVINFPVSPSFVINSQYKTSFRARAQSVGGG-DSTVLSSGSIAVNGDPVSREKEKNG- 105
M V+N V P FV NS+ K R R QS+G G +S +LSS SI V G + EKEKNG
Sbjct: 1 MPLVVNSLVLPYFVTNSEAKLRSRVRVQSLGSGRESKILSSDSIPVKGTSI-EEKEKNGD 59
Query: 106 --------------ALIDVGNGTLK-PRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYL 150
LID GNG LK RVEKK+ VK+VIS +LEVLWDDGYGT +V+DYL
Sbjct: 60 LVDGFVRKIEKSDEGLIDGGNGRLKYTRVEKKR-VKDVISNDLEVLWDDGYGTKTVRDYL 118
Query: 151 DAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRC 210
+ AKEIIKPDGGPPRWFCPV+CG+PLK SP LLF PGIDG+GLGL LHHK LGK FEVRC
Sbjct: 119 EGAKEIIKPDGGPPRWFCPVECGQPLKDSPILLFFPGIDGVGLGLTLHHKALGKVFEVRC 178
Query: 211 LHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLIL 270
LHIPVYDRTPFEGLVKFVE+ VR EHASSP KPIYLVGDSFGGCLALAVAARNP IDL+L
Sbjct: 179 LHIPVYDRTPFEGLVKFVEKIVRLEHASSPNKPIYLVGDSFGGCLALAVAARNPEIDLVL 238
Query: 271 ILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330
IL+NPATSF RSQLQP FP+L+A+PDELH AVPYLLS+VMGDP+KMAMVNIE++LPP ++
Sbjct: 239 ILANPATSFNRSQLQPFFPLLEALPDELHNAVPYLLSFVMGDPVKMAMVNIESKLPPGLQ 298
Query: 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390
+EQLSNNL A+LP LS ++DIIPKDTLLWKLKLLKSA+AYANSRLH+VKAEVLVL+SGKD
Sbjct: 299 IEQLSNNLTAMLPSLSGLADIIPKDTLLWKLKLLKSAAAYANSRLHSVKAEVLVLSSGKD 358
Query: 391 NMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVAD 450
MLPS DE++RL +SL+NC VR+FK+NGHT+LLE+G++LLTIIKGT KYRRSR+LD V++
Sbjct: 359 QMLPSGDESQRLKSSLKNCTVRHFKENGHTILLEDGVNLLTIIKGTSKYRRSRRLDFVSN 418
Query: 451 FLPPSRQEFKYAFDQVVGLLRVASSSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLG 510
++PPS EFK F++ VGLL+ ASS+ M STL+DG IV+GL GVPNEGPVLLVGYHMLLG
Sbjct: 419 YVPPSMSEFKRGFEE-VGLLQTASSAAMFSTLDDGNIVRGLGGVPNEGPVLLVGYHMLLG 477
Query: 511 FELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKL 570
EL SLVE FLREKNIMV G+AHP +F G LE SS EF +TDW+KVMGAVPV A N++KL
Sbjct: 478 LELSSLVEAFLREKNIMVRGMAHPMLFTGGLELSSKEFSITDWMKVMGAVPVTASNIYKL 537
Query: 571 LSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADL 630
LST SHVLLYPGG REA HY+GEEYKL WP+QQEFVRMAARFGATIVPFGAVGEDDIA+L
Sbjct: 538 LSTNSHVLLYPGGVREAFHYRGEEYKLIWPKQQEFVRMAARFGATIVPFGAVGEDDIAEL 597
Query: 631 VLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKP 690
VLDY DLM IPV+N VR+ R + IRD+ +GEVANQ + PGLLPKVPGRFY+LFGKP
Sbjct: 598 VLDYNDLMKIPVVNGYVRDATRKSTKIRDENQGEVANQVFYIPGLLPKVPGRFYFLFGKP 657
Query: 691 IQTKGREVSLKDKENANELYLHIKSQVERCLDYLLKKREEDPYRNIIDRTAYRAVY--GD 748
I+TKG+ L+D+ENAN+LYLHIKS+VE CL YLLKKRE+DPYR+IIDRT YRA+ +
Sbjct: 658 IETKGKGEILEDRENANQLYLHIKSEVESCLAYLLKKREDDPYRSIIDRTVYRALRSPSN 717
Query: 749 EVPTF 753
EVP F
Sbjct: 718 EVPAF 722
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125508|ref|XP_002319604.1| predicted protein [Populus trichocarpa] gi|222857980|gb|EEE95527.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1021 bits (2639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/708 (69%), Positives = 577/708 (81%), Gaps = 23/708 (3%)
Query: 48 MASVINFPVSPSFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGAL 107
MAS+ +SP +NS K F RAQS+GGGDSTVLSS I VNG KEKNGAL
Sbjct: 1 MASIFTCNISPYVALNSGNKPRFGVRAQSLGGGDSTVLSSDEIVVNGTSFVGPKEKNGAL 60
Query: 108 IDVGNGTLKPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWF 167
ID GN LE+LWDDG+GT +VKDYLD AKEIIKPDGGPPRWF
Sbjct: 61 IDGGN--------------------LELLWDDGHGTKTVKDYLDGAKEIIKPDGGPPRWF 100
Query: 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKF 227
CP +CG+PLK SP LLFLPG+DG+GLGL LHHK LGKAFEVRCLHIPVYDRT FEGLVK
Sbjct: 101 CPAECGKPLKDSPVLLFLPGLDGVGLGLALHHKALGKAFEVRCLHIPVYDRTTFEGLVKI 160
Query: 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL 287
VEETVR EHASSP KPIYLVG+SFG CLALAVAARNP IDL+LIL NPATSF RSQL PL
Sbjct: 161 VEETVRLEHASSPNKPIYLVGESFGACLALAVAARNPKIDLVLILVNPATSFSRSQL-PL 219
Query: 288 FPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSV 347
PIL+A+PD LH PYL+ +V G+P+KMAM NIE +LPPR++ +QL +NL ALLP +SV
Sbjct: 220 LPILEALPDGLHDVFPYLVGFVTGNPVKMAMANIEYKLPPRLQFQQLYHNLTALLPSVSV 279
Query: 348 MSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407
+SDIIPK+TL+W+LKLLKSA+AYANSRLHAVKAEVLVLASG DN+LPS+DEA RL +SL+
Sbjct: 280 LSDIIPKETLIWRLKLLKSAAAYANSRLHAVKAEVLVLASGNDNLLPSKDEAHRLKSSLK 339
Query: 408 NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQVV 467
NC VR FKDNGH++L+E+G++LLTIIKGTCKYRRSR+LD V+DFLPPS EFK AFD+V
Sbjct: 340 NCKVRFFKDNGHSMLMEDGLNLLTIIKGTCKYRRSRRLDLVSDFLPPSMSEFKCAFDEVT 399
Query: 468 GLLRVASSSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIM 527
GL R+A+ + + STL+DGKIVKGLAGVP+EGPVL +GYHML+G E+YSLV+EFLREKNIM
Sbjct: 400 GLFRLATCAAVFSTLDDGKIVKGLAGVPDEGPVLFIGYHMLMGLEIYSLVDEFLREKNIM 459
Query: 528 VHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGGAREA 587
V G+AHP++F +E SS EF ++DW+KVMGAVPV NLFKLLS KSHVLLYPGG REA
Sbjct: 460 VRGVAHPDLFSEIMEGSSTEFSVSDWMKVMGAVPVTGSNLFKLLSKKSHVLLYPGGQREA 519
Query: 588 LHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLMSIPVINDCV 647
LHYKGE YKL WP+Q EFVRMAARFGATIVPFG VGEDDIA+L LDY DLM IP++ND
Sbjct: 520 LHYKGEAYKLIWPDQPEFVRMAARFGATIVPFGTVGEDDIAELALDYHDLMKIPILNDFA 579
Query: 648 RELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENAN 707
R+L + +RD+++GEVA+ LF PGLLPK+PGRFY+LFGKPI+TKG + L+DKENA
Sbjct: 580 RDLMSKSSRVRDESKGEVASTDLFIPGLLPKIPGRFYFLFGKPIKTKGMKEMLEDKENAK 639
Query: 708 ELYLHIKSQVERCLDYLLKKREEDPYRNIIDRTAYRAVYG--DEVPTF 753
+LYLH+KS+V+ + YLLKKREEDPYR+IIDRT YRA Y EVP F
Sbjct: 640 QLYLHVKSEVQNSIAYLLKKREEDPYRSIIDRTIYRAFYSPLPEVPAF 687
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359487917|ref|XP_002271452.2| PREDICTED: acyltransferase-like protein At1g54570, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/709 (70%), Positives = 583/709 (82%), Gaps = 3/709 (0%)
Query: 48 MASVINFPVS-PSFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGA 106
MASV +F V+ PSFV+ S+ K+ RA+ Q + G DS+++SS S+ VNG V +K K
Sbjct: 1 MASVSSFRVALPSFVLKSECKSRNRAQIQCLTGPDSSMVSSDSVLVNGASVVGDKSKIEP 60
Query: 107 LIDVGNGTLKPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRW 166
LI+ N L +VE+KK VK + E+LEVLWDDGYGT++VKDYL+ +KE+I+PDGGPPRW
Sbjct: 61 LINGENRRLGSKVEEKKSVKYDVKEQLEVLWDDGYGTETVKDYLEISKEMIRPDGGPPRW 120
Query: 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVK 226
FCPV CG+PLK SP LLFLPGIDG+GLGLILHHK LGK FEVRC+HIPVYDRTPFEGLVK
Sbjct: 121 FCPVACGQPLKDSPVLLFLPGIDGVGLGLILHHKALGKVFEVRCMHIPVYDRTPFEGLVK 180
Query: 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP 286
VE+TVR EHASSP KPIYL+G+SFGGCLALAVAARNPTIDL++IL NPATSFGRSQLQP
Sbjct: 181 LVEKTVRLEHASSPNKPIYLLGESFGGCLALAVAARNPTIDLVVILVNPATSFGRSQLQP 240
Query: 287 LFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLS 346
L PIL+++PD LH VPYLLS++MGDP+KMAMVNI++ LPP +EQLS NL ALLP LS
Sbjct: 241 LLPILESLPDGLHFTVPYLLSFIMGDPMKMAMVNIDSTLPPPFVVEQLSGNLTALLPCLS 300
Query: 347 VMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406
+SDIIPKDTL WKLKLLKSA+AYANSRLHAVKAEVL+LASGKDNMLPS DEA+RL N L
Sbjct: 301 GLSDIIPKDTLHWKLKLLKSAAAYANSRLHAVKAEVLLLASGKDNMLPSGDEARRLWNLL 360
Query: 407 QNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQV 466
QNC VR FKDNGHTLLLE+G++LLTIIKG +YRRSR+ D V+DFLPPS E K AFDQ
Sbjct: 361 QNCRVRYFKDNGHTLLLEDGVNLLTIIKGALRYRRSRRHDYVSDFLPPSMSELKRAFDQQ 420
Query: 467 VGLLRVASSSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNI 526
LLR +S +M STLE+GKIVKG+AGVPNEGPVLLVGYHML+G EL L+EEFLREKNI
Sbjct: 421 NRLLRFGASPIMFSTLENGKIVKGIAGVPNEGPVLLVGYHMLMGLELSFLIEEFLREKNI 480
Query: 527 MVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGGARE 586
MV G+AHPE+FL R + S+EF DW ++ GAVPV A NLFKL S KSH+LLYPGGARE
Sbjct: 481 MVRGVAHPELFLERRASPSDEFSYFDWTRIYGAVPVTASNLFKLFSKKSHILLYPGGARE 540
Query: 587 ALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLMSIPVINDC 646
ALH KGEEY+LFWP+Q EFVRMAA FGATIVPFG VGEDDIA+LVLDY DLM IP++ND
Sbjct: 541 ALHRKGEEYQLFWPDQPEFVRMAAHFGATIVPFGVVGEDDIAELVLDYDDLMRIPLVNDY 600
Query: 647 VRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENA 706
++E RD V R GEV N+ LF P L PKVPGRFYYLFGKPI+TKGRE LK+KENA
Sbjct: 601 IKETTRDAVRPRAGFSGEVGNENLFVPVLFPKVPGRFYYLFGKPIETKGRENELKNKENA 660
Query: 707 NELYLHIKSQVERCLDYLLKKREEDPYRNIIDRTAYRAVYG--DEVPTF 753
N LYL IKS++E + YL+KKRE+DPYR IIDRT Y+A+ +VPTF
Sbjct: 661 NVLYLQIKSEIEHIMAYLIKKREKDPYRGIIDRTIYQAISAPPGQVPTF 709
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125526|ref|XP_002319608.1| predicted protein [Populus trichocarpa] gi|222857984|gb|EEE95531.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/636 (72%), Positives = 542/636 (85%), Gaps = 3/636 (0%)
Query: 121 KKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRPLKGSP 180
KKK VK+VIS +L+VLWDDGYGT + KD+ + AKE+I+PDGGPPRWFCP +CG+PLK SP
Sbjct: 1 KKKSVKDVISSDLDVLWDDGYGTKTAKDFFEGAKEMIRPDGGPPRWFCPTECGQPLKDSP 60
Query: 181 TLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSP 240
LLF PGI G+GL L LHHK LGK FEVRCLHIPV DRTPFEGLVKFVEETVR EHASSP
Sbjct: 61 ILLFCPGIVGVGLALTLHHKALGKVFEVRCLHIPVNDRTPFEGLVKFVEETVRLEHASSP 120
Query: 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHC 300
KPIYLVGDSFGGCL LAVAARNP IDL++IL+NPATSF RSQL+PL P+ +A+PD L+
Sbjct: 121 NKPIYLVGDSFGGCLVLAVAARNPEIDLVVILANPATSFDRSQLRPLIPLWEALPDGLYN 180
Query: 301 AVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWK 360
A+PYLLS+VMG+P++MA VNIE RLPPR+++EQL NL ALLP LS + DIIPKDTL+WK
Sbjct: 181 ALPYLLSFVMGNPVEMARVNIEYRLPPRLQIEQLFQNLIALLPHLSDLVDIIPKDTLIWK 240
Query: 361 LKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHT 420
LKLLKSA++YANSRLHAVKAEVLVL+SG D+MLPS DEA+RL +L+NC VR FKDNGH
Sbjct: 241 LKLLKSAASYANSRLHAVKAEVLVLSSGNDHMLPSGDEAQRLKRTLKNCTVRYFKDNGHN 300
Query: 421 LLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQVVGLLRVASSSVMLS 480
+L+E G++LL +IKGT KYRRSR++D V DF+PPS EFK +D+V GLLR A+ S M S
Sbjct: 301 ILMEGGVNLLAVIKGTGKYRRSRRIDLVLDFIPPSMSEFKQGYDEVFGLLRFATGSAMFS 360
Query: 481 TLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGR 540
TL DGKIVKGL GVPNEGPVLLVGYHML+G E+YSLV EFLREKNIMV G+AHP +F R
Sbjct: 361 TLNDGKIVKGLHGVPNEGPVLLVGYHMLMGLEVYSLVPEFLREKNIMVRGVAHPVVFRER 420
Query: 541 LENSSNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWP 600
SS EF + DW+KVMGAVPV A NLF LLSTKSHVLLYPGGAREALH +GEEYKLFWP
Sbjct: 421 QGVSSPEFSLADWMKVMGAVPVTASNLFNLLSTKSHVLLYPGGAREALHNRGEEYKLFWP 480
Query: 601 EQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLMSIPVINDCVRELARDTVNIRDD 660
+QQEFVRMAARFGATIVPFG VGEDD+A+LVLDY D M IPVIND +R+ R+++ +RD
Sbjct: 481 DQQEFVRMAARFGATIVPFGTVGEDDVAELVLDYNDFMKIPVINDYIRDANRNSIRLRDK 540
Query: 661 TRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGR-EVSLKDKENANELYLHIKSQVER 719
++GEVANQ L+ PG+LPKVPGRFY+LFGKPI+TK R E L+D+ENAN+LYLHIKS+VER
Sbjct: 541 SKGEVANQELYLPGILPKVPGRFYFLFGKPIETKDRKEEILEDRENANQLYLHIKSEVER 600
Query: 720 CLDYLLKKREEDPYRNIIDRTAYRAVYG--DEVPTF 753
C+ YLLKKREEDPYR+I+DRT YRA++ EVP F
Sbjct: 601 CIAYLLKKREEDPYRSIVDRTVYRALHSPLHEVPAF 636
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224131378|ref|XP_002328524.1| predicted protein [Populus trichocarpa] gi|222838239|gb|EEE76604.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/658 (71%), Positives = 549/658 (83%), Gaps = 4/658 (0%)
Query: 99 REKEKNGALIDVGNGTLKPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIK 158
REKEK G D N +LK VEKK VK+VIS L+VLWDDGYGT +VKDY + AKE+I+
Sbjct: 22 REKEKTGGRADAWNASLKCGVEKK-CVKDVISSHLDVLWDDGYGTKTVKDYFEEAKEMIR 80
Query: 159 PDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDR 218
PDGGPPRWFCPV+CG+PLK SP LLF PG+DG+G L LHHK LGK FEVRCLHIPV DR
Sbjct: 81 PDGGPPRWFCPVECGQPLKDSPVLLFCPGLDGVGSALALHHKALGKVFEVRCLHIPVRDR 140
Query: 219 TPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278
TPFEGLV VE+TVR EHASSP KPIYL+GDSFGGCL LA+AARNP IDL++IL+NPATS
Sbjct: 141 TPFEGLVTIVEKTVRLEHASSPSKPIYLLGDSFGGCLVLAIAARNPEIDLVVILANPATS 200
Query: 279 FGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNL 338
F RSQLQPLFP+ +A PD L+ A+PYLLS++MGDP+KMA VNI++RLP R+++EQL NL
Sbjct: 201 FDRSQLQPLFPLSEAWPDGLYNAMPYLLSFIMGDPVKMARVNIDHRLPRRLQIEQLFQNL 260
Query: 339 PALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398
ALLP LS ++DI+PKDTL+WKLKLLKSA++Y NSR+HAVKAEVLVL+SG D MLPS DE
Sbjct: 261 IALLPCLSDLADIVPKDTLIWKLKLLKSAASYTNSRIHAVKAEVLVLSSGNDYMLPSGDE 320
Query: 399 AKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQE 458
A+RL +SL+NC VR FKDNGHT+LLE+G++LLT+IKGT KYRRSR ++ V DF+PPS E
Sbjct: 321 AQRLKSSLKNCTVRYFKDNGHTILLEDGVNLLTVIKGTGKYRRSRTINFVTDFVPPSMSE 380
Query: 459 FKYAFDQVVGLLRVASSSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVE 518
FKY D++VGLL A+ S M STL+DGKIVKGL GVPNEGPVL VG HML+G E+ SLV
Sbjct: 381 FKYGNDELVGLLSFATGSAMFSTLDDGKIVKGLHGVPNEGPVLFVGNHMLMGLEVCSLVL 440
Query: 519 EFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVL 578
EFLRE+NIMV G+AHP + R SS EF TDW+KVMGAVPV A NLFKLLSTKSHVL
Sbjct: 441 EFLRERNIMVRGVAHPVVLGEREWVSSPEFSFTDWMKVMGAVPVTASNLFKLLSTKSHVL 500
Query: 579 LYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLM 638
LYPGGARE+LH++GEEY+LFWP+QQEFVRMAARFGATIVPFG VGEDDIA+LVLDY DLM
Sbjct: 501 LYPGGARESLHHRGEEYRLFWPDQQEFVRMAARFGATIVPFGTVGEDDIAELVLDYNDLM 560
Query: 639 SIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGR-E 697
IPV+ND +R ++ IRD ++GEVANQ L+ PGLLPK+PGRFY+LFGKPI TKGR E
Sbjct: 561 KIPVLNDYIRNATSSSIRIRDKSKGEVANQELYLPGLLPKLPGRFYFLFGKPIATKGRKE 620
Query: 698 VSLKDKENANELYLHIKSQVERCLDYLLKKREEDPYRNIIDRTAYRAVYG--DEVPTF 753
L+D+ENA +LYLHIKS+VE C+ YLLKKREEDPYRNI+DRT Y A++ EVP F
Sbjct: 621 EILEDRENAKQLYLHIKSEVEGCIAYLLKKREEDPYRNIVDRTVYHALHSPLHEVPAF 678
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125518|ref|XP_002319606.1| predicted protein [Populus trichocarpa] gi|222857982|gb|EEE95529.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/709 (63%), Positives = 555/709 (78%), Gaps = 31/709 (4%)
Query: 48 MASVINFPVSPSFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGAL 107
MAS + + P F +NS K F+AR QS S S+A+
Sbjct: 1 MASFVTSGILPCFGLNSDVKPRFQARVQS----------SASVALK-------------- 36
Query: 108 IDVGNGTLKPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWF 167
G LKP +E+KK V + ++LE LWDDGYGT ++KDY D AKE+I+PDGGPPRWF
Sbjct: 37 ----LGRLKPSIEEKKWVNDFGPKDLEPLWDDGYGTKTIKDYFDGAKEMIRPDGGPPRWF 92
Query: 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKF 227
CP++CG+PLK SPTLLFLPG+DG+GLGL LHHK LGKAFEV CLHIPVYDRT FEGLVK
Sbjct: 93 CPIECGQPLKSSPTLLFLPGVDGVGLGLTLHHKALGKAFEVLCLHIPVYDRTSFEGLVKN 152
Query: 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL 287
VEETVR EHA +P KPIYLVG+S GGCLA+AVAARNP +DL++IL+NPATSFGRS+LQP
Sbjct: 153 VEETVRLEHARNPNKPIYLVGESIGGCLAIAVAARNPKVDLVVILANPATSFGRSKLQPF 212
Query: 288 FPILKAMPDELHCAVPYLLSYVM-GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLS 346
PIL+A+P++LH V ++ G+P+KMAMV +E+RLP R+K+ +L NL ALL LS
Sbjct: 213 LPILEAVPNQLHNGVANFFYFLTSGNPVKMAMVGVEDRLPSRLKIGKLYQNLMALLHNLS 272
Query: 347 VMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406
V++DIIPKDTL+WK+KLL+SA+ YANS LH VKAEVL+LAS +D +LPS DEA RL + L
Sbjct: 273 VVADIIPKDTLVWKMKLLRSAADYANSCLHNVKAEVLLLASERDRLLPSRDEALRLKSLL 332
Query: 407 QNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQV 466
QNC VRNFK NGH +LLE+G+ LLT IKGT KYRRS+++D V+D+LPPS EFK F++
Sbjct: 333 QNCTVRNFKGNGHAILLEDGVGLLTAIKGTSKYRRSKRIDFVSDYLPPSTSEFKSFFEEA 392
Query: 467 VGLLRVASSSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNI 526
GLL A+ S M STLEDGKIVKGLAGVPNEGPVLLVGYHML+ F++Y L E FLREKNI
Sbjct: 393 YGLLLYAAGSTMFSTLEDGKIVKGLAGVPNEGPVLLVGYHMLMAFDIYPLGEGFLREKNI 452
Query: 527 MVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGGARE 586
MV G+ HP++F G+LE+SSNEF DW++VMG V A NLFKLLSTKSHV+LYPGGARE
Sbjct: 453 MVRGLGHPDLFTGKLEDSSNEFAYADWIRVMGTVAGTASNLFKLLSTKSHVVLYPGGARE 512
Query: 587 ALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLMSIPVINDC 646
+LH KGEEYKLFWP+QQEFVR AARFGATIVPFG VGEDD+ LVLDY D+M IP+++D
Sbjct: 513 SLHNKGEEYKLFWPDQQEFVRTAARFGATIVPFGTVGEDDLTHLVLDYHDMMKIPIVSDY 572
Query: 647 VRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENA 706
+RE+ IRD+++GEVANQ ++ PG+LPK+PGRFYYLFGKPI+TKG E L+D+ENA
Sbjct: 573 IREVNSKATRIRDNSKGEVANQQVYIPGVLPKLPGRFYYLFGKPIKTKGMEDMLRDRENA 632
Query: 707 NELYLHIKSQVERCLDYLLKKREEDPYRNIIDRTAYRAVY--GDEVPTF 753
N+LYLH+KS+VE + YLLKKREEDPYR++I+RT Y+A++ VPTF
Sbjct: 633 NQLYLHVKSEVENNIAYLLKKREEDPYRSLINRTIYQALHSPSSNVPTF 681
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356571157|ref|XP_003553746.1| PREDICTED: acyltransferase-like protein At1g54570, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/714 (67%), Positives = 554/714 (77%), Gaps = 33/714 (4%)
Query: 48 MASVINFPVSPSFVINSQYKTSFRARAQSVGGGDSTVLSSGS---IAVNGDPVSREKEKN 104
MASV F VSP+ + + F RA VLSS S AVNG
Sbjct: 1 MASVTGFLVSPAGAVRHHW---FGVRA---------VLSSESGTVAAVNGSSSQ------ 42
Query: 105 GALIDVGNGTLKPRVEKKK--LVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGG 162
NG+L + EKK L E L LWDDGYG SV+DY AAKE+ K DGG
Sbjct: 43 -------NGSLALKEEKKVPLLRGEEEEEGLAALWDDGYGRRSVEDYFAAAKEMCKSDGG 95
Query: 163 PPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFE 222
PPRWFCP++CG P K SPTLLFLPG+DG GLGL LHHK LGKAFEVRCLHIPV+DRTPFE
Sbjct: 96 PPRWFCPLECGPPFKDSPTLLFLPGMDGTGLGLTLHHKALGKAFEVRCLHIPVHDRTPFE 155
Query: 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS 282
GLVK V E V+ E A SP KPIYLVGDS GG LALAVAA NPT+DL+LIL+NPATSFG+S
Sbjct: 156 GLVKLVGEAVKLECALSPNKPIYLVGDSLGGSLALAVAAHNPTVDLVLILANPATSFGQS 215
Query: 283 QLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALL 342
QLQPLFP ++A+PDE+H AVP+LLS++MGDP+KMA V+IEN+LPP K+EQLS NL ALL
Sbjct: 216 QLQPLFPFMEALPDEMHVAVPFLLSFIMGDPVKMASVSIENKLPPAKKIEQLSYNLTALL 275
Query: 343 PRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402
P L ++DIIP+DTLLWKLKLLKSA+AYANSR+HAV+AEVLVLASGKDNMLPS +EA+RL
Sbjct: 276 PCLPELADIIPRDTLLWKLKLLKSAAAYANSRIHAVEAEVLVLASGKDNMLPSTNEAQRL 335
Query: 403 NNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYA 462
LQNC VR FKD+GHTLLLE+GI LLTIIKGTC YRRSR+ D V DF+PPS EF+YA
Sbjct: 336 VGLLQNCKVRVFKDSGHTLLLEDGIGLLTIIKGTCMYRRSRRHDLVRDFIPPSMTEFRYA 395
Query: 463 FDQVVGLLRVASSSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLR 522
DQVVG R A+ SV STLEDGKIVKGL+GVP+EGPVL VGYHMLLG EL SL + FL
Sbjct: 396 MDQVVGSFRSATGSVFFSTLEDGKIVKGLSGVPDEGPVLYVGYHMLLGLELISLTDGFLS 455
Query: 523 EKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPG 582
EK I + GIAHP++F +E+ S+EF M DW+K+ G VPV+A N+FKLLSTKSHVLLYPG
Sbjct: 456 EKGIALRGIAHPDLFRPEVESWSSEFSMFDWVKIFGGVPVSASNIFKLLSTKSHVLLYPG 515
Query: 583 GAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLMSIPV 642
GAREALHYKGEEYKL WP+ EFVRMAARFGATIVPFGAVGEDDIA+LVLDY DLM IP+
Sbjct: 516 GAREALHYKGEEYKLIWPDHPEFVRMAARFGATIVPFGAVGEDDIAELVLDYNDLMKIPI 575
Query: 643 INDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKD 702
+ND +R + RD+V RD+T GEVANQ L FP LLPK+PGRFY+LFGKPI+TKG + LKD
Sbjct: 576 VNDQIRNMNRDSVKFRDETSGEVANQNLSFPVLLPKIPGRFYFLFGKPIRTKGMDKMLKD 635
Query: 703 KENANELYLHIKSQVERCLDYLLKKREEDPYRNIIDRTAYRAVY---GDEVPTF 753
+E+AN++YL IKS+VE L+YL+KKREEDPYRN IDR Y+ Y D P+F
Sbjct: 636 RESANQMYLQIKSEVEHNLNYLIKKREEDPYRNFIDRKMYQIFYPPETDSTPSF 689
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504086|ref|XP_003520830.1| PREDICTED: acyltransferase-like protein At1g54570, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/712 (66%), Positives = 560/712 (78%), Gaps = 15/712 (2%)
Query: 48 MASVINFPVSP-SFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGA 106
MA V F S V + +++ RA S ++ +GS + NG + +E++K
Sbjct: 1 MALVTGFLASHVGAVRHHRFEVGIGVRAVSSSESETVAAVNGSSSRNGSLLLKEEKKVPF 60
Query: 107 LIDVGNGTLKPRVEKKKLVKNVISEE-LEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPR 165
L RVE+KK + EE L LWDDGYG SV+DY AAKE+ K DGGPPR
Sbjct: 61 L----------RVEEKKNKRGEEEEEGLAALWDDGYGRRSVEDYFAAAKEMCKSDGGPPR 110
Query: 166 WFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLV 225
WFCP++CG P K SPTLLFLPG+DG GLGL LHH+ LGKAFEVRCLHIPV+DRTPFEGLV
Sbjct: 111 WFCPLECGPPFKDSPTLLFLPGMDGTGLGLTLHHQALGKAFEVRCLHIPVHDRTPFEGLV 170
Query: 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQ 285
K V E V+ E A SP KPIYLVGDSFGG LALAVAARNPT+DL+LIL+NPATSFG+SQLQ
Sbjct: 171 KLVGEAVKLECALSPNKPIYLVGDSFGGSLALAVAARNPTVDLVLILANPATSFGQSQLQ 230
Query: 286 PLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRL 345
PLFP ++A+PDELH AVP+LLS++MGDP+KMA VNI+N+LPP K+EQLS NL ALLP L
Sbjct: 231 PLFPFMEALPDELHVAVPFLLSFIMGDPVKMASVNIDNKLPPAKKIEQLSYNLTALLPCL 290
Query: 346 SVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405
++DIIP+DTLLWKLKLLKSA+AYANSR+HAVKAEVLVLASGKDNMLPS +EA+RL
Sbjct: 291 PELADIIPRDTLLWKLKLLKSAAAYANSRIHAVKAEVLVLASGKDNMLPSINEAQRLMGL 350
Query: 406 LQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQ 465
LQNC VR FKD+GHTLLLE+GI LLTIIKGTC YRRSR+ D V DF+PPS EF+YA DQ
Sbjct: 351 LQNCKVRVFKDSGHTLLLEDGIGLLTIIKGTCMYRRSRRHDLVRDFIPPSMTEFRYAMDQ 410
Query: 466 VVGLLRVASSSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKN 525
VVG R + SV STLEDGKI KGL+GVP+EGPVL VGYHMLLG EL SL + FL EK
Sbjct: 411 VVGSFRSVTGSVFFSTLEDGKITKGLSGVPDEGPVLYVGYHMLLGLELISLTDGFLSEKG 470
Query: 526 IMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGGAR 585
I++ GIAHPE+F ++E+ S+EF M DW+K+ G VPV+A N+FKLLSTKSHVLLYPGGAR
Sbjct: 471 IVLRGIAHPELFRPKVESWSSEFSMIDWVKIFGGVPVSASNIFKLLSTKSHVLLYPGGAR 530
Query: 586 EALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLMSIPVIND 645
EALHYKGE YKL WP+ EFVRMAARFGATIVPFGAVGEDD+A+LVLDY DLM IP++ND
Sbjct: 531 EALHYKGEAYKLTWPDHPEFVRMAARFGATIVPFGAVGEDDLAELVLDYNDLMKIPIVND 590
Query: 646 CVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKEN 705
+R + RD+V RD+T GEVANQ L FP LLPK+PGRFY+LFGKPI+TKG + LKD+E+
Sbjct: 591 RIRNMNRDSVKFRDETSGEVANQNLTFPVLLPKIPGRFYFLFGKPIKTKGMDKILKDRES 650
Query: 706 ANELYLHIKSQVERCLDYLLKKREEDPYRNIIDRTAYRAVY---GDEVPTFK 754
AN++YL IKS+VE L+YL+KKREEDPYRN +DR Y+ Y D P+FK
Sbjct: 651 ANQMYLEIKSEVEHNLNYLIKKREEDPYRNFVDRKMYQIFYPHETDPTPSFK 702
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|298204932|emb|CBI34239.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/600 (74%), Positives = 506/600 (84%), Gaps = 2/600 (0%)
Query: 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPV 215
+I+PDGGPPRWFCPV CG+PLK SP LLFLPGIDG+GLGLILHHK LGK FEVRC+HIPV
Sbjct: 1 MIRPDGGPPRWFCPVACGQPLKDSPVLLFLPGIDGVGLGLILHHKALGKVFEVRCMHIPV 60
Query: 216 YDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275
YDRTPFEGLVK VE+TVR EHASSP KPIYL+G+SFGGCLALAVAARNPTIDL++IL NP
Sbjct: 61 YDRTPFEGLVKLVEKTVRLEHASSPNKPIYLLGESFGGCLALAVAARNPTIDLVVILVNP 120
Query: 276 ATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLS 335
ATSFGRSQLQPL PIL+++PD LH VPYLLS++MGDP+KMAMVNI++ LPP +EQLS
Sbjct: 121 ATSFGRSQLQPLLPILESLPDGLHFTVPYLLSFIMGDPMKMAMVNIDSTLPPPFVVEQLS 180
Query: 336 NNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPS 395
NL ALLP LS +SDIIPKDTL WKLKLLKSA+AYANSRLHAVKAEVL+LASGKDNMLPS
Sbjct: 181 GNLTALLPCLSGLSDIIPKDTLHWKLKLLKSAAAYANSRLHAVKAEVLLLASGKDNMLPS 240
Query: 396 EDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPS 455
DEA+RL N LQNC VR FKDNGHTLLLE+G++LLTIIKG +YRRSR+ D V+DFLPPS
Sbjct: 241 GDEARRLWNLLQNCRVRYFKDNGHTLLLEDGVNLLTIIKGALRYRRSRRHDYVSDFLPPS 300
Query: 456 RQEFKYAFDQVVGLLRVASSSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYS 515
E K AFDQ LLR +S +M STLE+GKIVKG+AGVPNEGPVLLVGYHML+G EL
Sbjct: 301 MSELKRAFDQQNRLLRFGASPIMFSTLENGKIVKGIAGVPNEGPVLLVGYHMLMGLELSF 360
Query: 516 LVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLSTKS 575
L+EEFLREKNIMV G+AHPE+FL R + S+EF DW ++ GAVPV A NLFKL S KS
Sbjct: 361 LIEEFLREKNIMVRGVAHPELFLERRASPSDEFSYFDWTRIYGAVPVTASNLFKLFSKKS 420
Query: 576 HVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYK 635
H+LLYPGGAREALH KGEEY+LFWP+Q EFVRMAA FGATIVPFG VGEDDIA+LVLDY
Sbjct: 421 HILLYPGGAREALHRKGEEYQLFWPDQPEFVRMAAHFGATIVPFGVVGEDDIAELVLDYD 480
Query: 636 DLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKG 695
DLM IP++ND ++E RD V R GEV N+ LF P L PKVPGRFYYLFGKPI+TKG
Sbjct: 481 DLMRIPLVNDYIKETTRDAVRPRAGFSGEVGNENLFVPVLFPKVPGRFYYLFGKPIETKG 540
Query: 696 REVSLKDKENANELYLHIKSQVERCLDYLLKKREEDPYRNIIDRTAYRAVYG--DEVPTF 753
RE LK+KENAN LYL IKS++E + YL+KKRE+DPYR IIDRT Y+A+ +VPTF
Sbjct: 541 RENELKNKENANVLYLQIKSEIEHIMAYLIKKREKDPYRGIIDRTIYQAISAPPGQVPTF 600
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 756 | ||||||
| TAIR|locus:2199481 | 704 | PES1 "AT1G54570" [Arabidopsis | 0.911 | 0.978 | 0.583 | 5.2e-216 | |
| TAIR|locus:2088404 | 701 | PES2 "AT3G26840" [Arabidopsis | 0.802 | 0.865 | 0.470 | 4.3e-148 | |
| TAIR|locus:2163091 | 684 | AT5G41120 "AT5G41120" [Arabido | 0.797 | 0.881 | 0.453 | 2.3e-142 | |
| TAIR|locus:2088474 | 634 | AT3G26820 "AT3G26820" [Arabido | 0.320 | 0.381 | 0.520 | 6.4e-125 | |
| UNIPROTKB|O53962 | 287 | Rv1920 "PROBABLE MEMBRANE PROT | 0.306 | 0.808 | 0.304 | 3.5e-17 | |
| UNIPROTKB|E1C0A2 | 311 | LOC421125 "Uncharacterized pro | 0.179 | 0.437 | 0.297 | 7.5e-05 | |
| UNIPROTKB|E1BU95 | 316 | LOC421125 "Uncharacterized pro | 0.179 | 0.430 | 0.297 | 7.7e-05 | |
| UNIPROTKB|E1C5P7 | 317 | LOC421125 "Uncharacterized pro | 0.179 | 0.429 | 0.297 | 7.8e-05 | |
| ZFIN|ZDB-GENE-040426-1267 | 331 | tmem68 "transmembrane protein | 0.164 | 0.374 | 0.274 | 0.00026 | |
| FB|FBgn0085377 | 323 | CG34348 [Drosophila melanogast | 0.165 | 0.386 | 0.268 | 0.00062 |
| TAIR|locus:2199481 PES1 "AT1G54570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2087 (739.7 bits), Expect = 5.2e-216, P = 5.2e-216
Identities = 411/704 (58%), Positives = 513/704 (72%)
Query: 56 VSPSFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGALIDVGNGTL 115
V P+ ++S + +F+ RAQ + G + S + NG +N + NG
Sbjct: 10 VLPNLRLSSNQRRNFKVRAQ-ISGENKKATSLEPVNNNGSVSLSTTVQNQKGANEVNG-- 66
Query: 116 KPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRP 175
K K + ++S+E+E+LWDDGYG+ SVKDY AAKEI+K DGGPPRWF PVDCGRP
Sbjct: 67 -----KGKSKRKIVSDEIELLWDDGYGSKSVKDYFAAAKEILKADGGPPRWFSPVDCGRP 121
Query: 176 LKGSPTXXXXXXXXXXXXXXXXXXXXXXXAFEVRCLHIPVYDRTPFEGLVKFVEETVRRE 235
++ +PT AF V CLHIPV DRTPFEGL+K VE+ +R+E
Sbjct: 122 VEDAPTLLFLPGMDGTGMGLVPHHKALGKAFHVSCLHIPVLDRTPFEGLLKVVEDVLRQE 181
Query: 236 HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP 295
A+ P KPIYLVGDSFGGCLALAVAARN ++DL+LIL NPATSF RS LQPL PIL+ +P
Sbjct: 182 QATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFDRSPLQPLLPILEMVP 241
Query: 296 DELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLP-ALLPRLSVMSDIIPK 354
+ELH VPY LS++MGDPIKMA + I+N+LP +K+E+L L +LP LS + IIP+
Sbjct: 242 EELHFTVPYALSFIMGDPIKMATLGIDNQLPTGVKIEKLRQRLTKTMLPLLSELGGIIPR 301
Query: 355 DTXXXXXXXXXSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNF 414
+T S AYANSR+HAV+AEVLVLASGKD MLPS++EAKRL+ L+NC VR F
Sbjct: 302 ETLLWKLKLLRSGCAYANSRIHAVQAEVLVLASGKDMMLPSQEEAKRLHGLLKNCSVRCF 361
Query: 415 KDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQVVGLLRVAS 474
KDNGHTLLLE+ ISLLT+IKGT KYRRS + D V+DFLPPS+ E YA D+V+G LR A
Sbjct: 362 KDNGHTLLLEDSISLLTVIKGTGKYRRSWRYDLVSDFLPPSKGELAYALDEVLGFLRNAV 421
Query: 475 SSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHP 534
SV ST+EDGKIVKGLAGVP++GPVLLVGYHML+G EL + E F++EKNI+ G+AHP
Sbjct: 422 GSVFFSTMEDGKIVKGLAGVPDKGPVLLVGYHMLMGLELGPMSEAFIKEKNILFRGMAHP 481
Query: 535 EIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGGAREALHYKGEE 594
++ + ++G DW+KV GA PV A NLFKLL +KSHVLL+PGGAREALH +GE+
Sbjct: 482 VLYSDNDPAKAFDYG--DWIKVFGAYPVTATNLFKLLDSKSHVLLFPGGAREALHNRGEQ 539
Query: 595 YKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLMSIPVINDCVRELARDT 654
YKL WPEQQEFVRMAARFGATIVPFG VGEDDIA+LVLDY DLM IP++ND + E+ RDT
Sbjct: 540 YKLIWPEQQEFVRMAARFGATIVPFGTVGEDDIAELVLDYNDLMKIPILNDYITEVTRDT 599
Query: 655 --VNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENANELYLH 712
+R+++ GEVANQ L+ PGL+PKVPGRFYYLFGKPI+TKGR +KDKE AN++YL
Sbjct: 600 KQFKLREESEGEVANQPLYLPGLIPKVPGRFYYLFGKPIETKGRPELVKDKEEANQVYLE 659
Query: 713 IKSQVERCLDYLLKKREEDPYRNIIDRTAYRAVY--GDEVPTFK 754
+K++VE + YLLKKREEDPYR+++DR Y + VP+F+
Sbjct: 660 VKAEVENSIAYLLKKREEDPYRSVLDRLNYSLTHTTATHVPSFE 703
|
|
| TAIR|locus:2088404 PES2 "AT3G26840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1446 (514.1 bits), Expect = 4.3e-148, P = 4.3e-148
Identities = 291/618 (47%), Positives = 391/618 (63%)
Query: 146 VKDYLDAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTXXXXXXXXXXXXXXXXXXXXXXXA 205
+ D+L+ A+E + GGPPRWF P++CG SP
Sbjct: 87 LSDFLEEAREFVGDGGGPPRWFSPLECGAQATNSPLLLYLPGIDGTGLGLIRHHKKLGEI 146
Query: 206 FEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT 265
F++ CLHIPV DRTP + LVK +EETV+ E+ P +PIYLVG+S G CLAL VAARNP
Sbjct: 147 FDIWCLHIPVSDRTPVKDLVKLIEETVKSENFRLPNRPIYLVGESIGACLALDVAARNPN 206
Query: 266 IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSY--VMGDPIKMAMVNIEN 323
IDL LIL NPAT +QPL +L +PD L + + + GDP+ + + N
Sbjct: 207 IDLSLILVNPATHVNNFMVQPLSGMLNVLPDGLPTLLEDIFDFGFKQGDPLTGMLDALSN 266
Query: 324 RLPPRIKLEQLSNNLP----ALLPRLSVMSDIIPKDTXXXXXXXXXSASAYANSRLHAVK 379
+ ++ + + A+ L +S + PKDT A A NS +++V+
Sbjct: 267 EFSVQ-RMGGVGGGMLRDVLAVSANLPTLSRMFPKDTLLWKLEMLKYAIASVNSHIYSVR 325
Query: 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439
AE L+L SG+D+ L E++ R + +L CIVR DNG LLE+G+ L TIIK TC Y
Sbjct: 326 AETLILLSGRDHWLLKEEDIDRYSRTLPKCIVRKLDDNGQFPLLEDGVDLATIIKCTCFY 385
Query: 440 RRSRKLDSVADFLPPSRQEFKYAFDQVVGLLRVASSSVMLSTLEDGKIVKGLAGVPNEGP 499
RR + D + D++ P+ E K D LL +S VMLSTLEDG +V+ L G+P+EGP
Sbjct: 386 RRGKSHDHITDYIMPTTFELKQQVDDH-RLLMDGTSPVMLSTLEDGTVVRSLEGLPSEGP 444
Query: 500 VLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGA 559
VL VGYHM+LGFEL +V + + E+NI + G+AHP +F L++S + M D K+MG
Sbjct: 445 VLYVGYHMILGFELAPMVIQLMTERNIHLRGLAHPMLFKN-LQDSLVDTKMFDKYKIMGG 503
Query: 560 VPVAARNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPF 619
VPV+ N++KLL K+HVLLYPGG REALH KGEEYKLFWPE+ EFVR+A++FGA IVPF
Sbjct: 504 VPVSHFNIYKLLREKAHVLLYPGGVREALHRKGEEYKLFWPERSEFVRVASKFGAKIVPF 563
Query: 620 GAVGEDDIADLVLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKV 679
G VGEDDI ++VLD D +IP++ D + + +D NIR+ E+ NQ +FPGL+PK+
Sbjct: 564 GVVGEDDICEIVLDSNDQRNIPILKDLMEKATKDAGNIREGDESELGNQECYFPGLVPKI 623
Query: 680 PGRFYYLFGKPIQTKGREVSLKDKENANELYLHIKSQVERCLDYLLKKREEDPYRNIIDR 739
PGRFYY FGKPI+T G+E LKDKE A ELYL +KS+VE+C+DYL KRE DPYR+++ R
Sbjct: 624 PGRFYYYFGKPIETAGKEKELKDKEKAQELYLQVKSEVEQCIDYLKVKRESDPYRHLLPR 683
Query: 740 TAYRAVYG--DEVPTFKL 755
Y+A +G E+PTF L
Sbjct: 684 MLYQASHGWSSEIPTFDL 701
|
|
| TAIR|locus:2163091 AT5G41120 "AT5G41120" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1392 (495.1 bits), Expect = 2.3e-142, P = 2.3e-142
Identities = 280/618 (45%), Positives = 392/618 (63%)
Query: 145 SVKDYLDAAKEIIKPDGG---PPRWFCPVDCGRPLKGSPTXXXXXXXXXXXXXXXXXXXX 201
S+ D+L A + + DGG PPRWF P++CG SP
Sbjct: 72 SLTDFLTEAGDFVNSDGGDGGPPRWFSPLECGARAPESPLLLYLPGIDGTGLGLIRQHKR 131
Query: 202 XXXAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAA 261
F++ CLH PV DRTP + K +E+TVR EH P +PIY+VG+S G LAL VAA
Sbjct: 132 LGEIFDIWCLHFPVKDRTPARDIGKLIEKTVRSEHYRFPNRPIYIVGESIGASLALDVAA 191
Query: 262 RNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM--AMV 319
NP IDL+LIL+NP T F LQP+ +L+ +PD VP L++ G +M M+
Sbjct: 192 SNPDIDLVLILANPVTRFTNLMLQPVLALLEILPD----GVPGLITENFGFYQEMFETML 247
Query: 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTXXXXXXXXXSASAYANSRLHAVK 379
N EN + L + A L + I PKDT SASA ANS++ V
Sbjct: 248 N-ENDAAQMGR--GLLGDFFATSSNLPTLIRIFPKDTLLWKLQLLKSASASANSQMDTVN 304
Query: 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439
A+ L+L SG+D L ++++ +RL +L C VR ++NG L LE+G+ L++IIK Y
Sbjct: 305 AQTLILLSGRDQWLMNKEDIERLRGALPRCEVRELENNGQFLFLEDGVDLVSIIKRAYYY 364
Query: 440 RRSRKLDSVADFLPPSRQEFKYAFDQVVGLLRVASSSVMLSTLEDGKIVKGLAGVPNEGP 499
RR + LD ++D++ P+ EFK +++ LL +S V LSTL++G +V+ LAG+P+EGP
Sbjct: 365 RRGKSLDYISDYILPTPFEFK-EYEESQRLLTAVTSPVFLSTLKNGAVVRSLAGIPSEGP 423
Query: 500 VLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGA 559
VL VG HMLLG EL+++ FL+E+NI++ G+AHP +F + + + + D +++GA
Sbjct: 424 VLYVGNHMLLGMELHAIALHFLKERNILLRGLAHPLMFTKKTGSKLPDMQLYDLFRIIGA 483
Query: 560 VPVAARNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPF 619
VPV+ N +KLL +K+HV LYPGG REALH KGEEYKLFWPE EFVR+A++FGA I+PF
Sbjct: 484 VPVSGMNFYKLLRSKAHVALYPGGVREALHRKGEEYKLFWPEHSEFVRIASKFGAKIIPF 543
Query: 620 GAVGEDDIADLVLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKV 679
G VGEDD+ ++VLDY D M IP + + + E+ +D+VN+R+D GE+ Q L PG++PK+
Sbjct: 544 GVVGEDDLCEMVLDYDDQMKIPFLKNLIEEITQDSVNLRNDEEGELGKQDLHLPGIVPKI 603
Query: 680 PGRFYYLFGKPIQTKGREVSLKDKENANELYLHIKSQVERCLDYLLKKREEDPYRNIIDR 739
PGRFY FGKPI T+GRE L +KE A+E+YL +KS+VERC++YL KRE DPYRNI+ R
Sbjct: 604 PGRFYAYFGKPIDTEGREKELNNKEKAHEVYLQVKSEVERCMNYLKIKRETDPYRNILPR 663
Query: 740 TAYRAVYG--DEVPTFKL 755
+ Y +G ++PTF L
Sbjct: 664 SLYYLTHGFSSQIPTFDL 681
|
|
| TAIR|locus:2088474 AT3G26820 "AT3G26820" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 663 (238.4 bits), Expect = 6.4e-125, Sum P(2) = 6.4e-125
Identities = 129/248 (52%), Positives = 173/248 (69%)
Query: 513 LYSLVEE--FLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKL 570
+ S +E+ L+E+NI + G+ HP +F+ +++S + M D K+MG VPV+ N +KL
Sbjct: 388 MLSTLEDGLLLKERNIHMRGLTHPMVFM-YIQDSLVDPKMFDKYKLMGGVPVSNMNFYKL 446
Query: 571 LSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADL 630
L K+HVLLYPGG REALH KGEEYKLFWPEQ EFVR+A++FGA IVPFG VGEDDI ++
Sbjct: 447 LREKAHVLLYPGGVREALHRKGEEYKLFWPEQSEFVRVASKFGAKIVPFGVVGEDDIFNI 506
Query: 631 VLDYKDLMSIPVINDCVRELARDTVNIR-DDTRGEVANQALFFPGLLPKVPGRFYYLFGK 689
VLD D +IP++ D + + +D N+R +T+ + PGL+PK+PGRFYY FGK
Sbjct: 507 VLDSNDQRNIPILKDLMEKATKDAGNLRWKETKANWETKIAIIPGLVPKIPGRFYYYFGK 566
Query: 690 PIQTKGREVSLKDKENANELYLHIKSQVERCLDYLLKKREEDPYRNIIDRTAYRAVYG-- 747
PI G+E LKDKE A E+YL KS+VE+C+ YL KRE DPYR ++ R Y+A +G
Sbjct: 567 PIDLAGKEKELKDKEKAQEVYLQAKSEVEQCIAYLKMKRECDPYRQLLPRMMYQASHGWS 626
Query: 748 DEVPTFKL 755
E+PTF L
Sbjct: 627 CEIPTFDL 634
|
|
| UNIPROTKB|O53962 Rv1920 "PROBABLE MEMBRANE PROTEIN" [Mycobacterium tuberculosis H37Rv (taxid:83332)] | Back alignment and assigned GO terms |
|---|
Score = 221 (82.9 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 77/253 (30%), Positives = 113/253 (44%)
Query: 488 VKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNE 547
V G+ VP E LLVG H LG L+ L E+ +V + F ++
Sbjct: 49 VYGIENVPTER-ALLVGNHNTLGLVDAPLLAAELWERGRIVRSLGDHAHF--KIP----- 100
Query: 548 FGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVR 607
G D L G V +L+ V+++PGGARE K E YKL W + F R
Sbjct: 101 -GWRDALTRTGVVEGTREITSELMRRGELVMVFPGGAREVNKRKNERYKLVWKNRLGFAR 159
Query: 608 MAARFGATIVPFGAVGEDDIADLVLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVAN 667
+A + G IVPF +VG + D+VLD + + PV + LA + +D G
Sbjct: 160 LAIQHGYPIVPFASVGAEHGIDIVLDNESPLLAPV-----QFLAEKLLGTKD---GPALV 211
Query: 668 QALFFPGLLPKV-PGRFYYLFGKPIQTKGREVSLKDKENANELYLHIKSQVERCLDYLLK 726
+ + GL P P R YY FG+PI T D A + + +E ++ +L
Sbjct: 212 RGV---GLTPVPRPERQYYWFGEPIDTTEFMGQQADDNAARRVRERAAAAIEHGIELMLA 268
Query: 727 KREEDPYRNIIDR 739
+R DP R+++ R
Sbjct: 269 ERAADPNRSLVGR 281
|
|
| UNIPROTKB|E1C0A2 LOC421125 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 126 (49.4 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 44/148 (29%), Positives = 69/148 (46%)
Query: 472 VASSSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFE-LYSLVEEFLREKNIMVHG 530
VAS + + + G + G+ +P EGP ++V YH + + LY L FL +K + +
Sbjct: 57 VASFWDIYARIWHGYELHGVENLP-EGPGIVVYYHGAIPIDYLYFLSRLFLWKKRLCLSV 115
Query: 531 IAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGGAREALHY 590
H F+ RL G+ L+V G +P L V + PGG REAL +
Sbjct: 116 ADH---FVFRLP------GLKLLLEVTGVMPGTREECLSALKNGHLVSISPGGVREAL-F 165
Query: 591 KGEEYKLFWPEQQEFVRMAARFGATIVP 618
E Y+L W ++ F ++A I+P
Sbjct: 166 SDESYQLMWGNRKGFAQVALDAKVPIIP 193
|
|
| UNIPROTKB|E1BU95 LOC421125 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 126 (49.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 44/148 (29%), Positives = 69/148 (46%)
Query: 472 VASSSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFE-LYSLVEEFLREKNIMVHG 530
VAS + + + G + G+ +P EGP ++V YH + + LY L FL +K + +
Sbjct: 57 VASFWDIYARIWHGYELHGVENLP-EGPGIVVYYHGAIPIDYLYFLSRLFLWKKRLCLSV 115
Query: 531 IAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGGAREALHY 590
H F+ RL G+ L+V G +P L V + PGG REAL +
Sbjct: 116 ADH---FVFRLP------GLKLLLEVTGVMPGTREECLSALKNGHLVSISPGGVREAL-F 165
Query: 591 KGEEYKLFWPEQQEFVRMAARFGATIVP 618
E Y+L W ++ F ++A I+P
Sbjct: 166 SDESYQLMWGNRKGFAQVALDAKVPIIP 193
|
|
| UNIPROTKB|E1C5P7 LOC421125 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 126 (49.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 44/148 (29%), Positives = 69/148 (46%)
Query: 472 VASSSVMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFE-LYSLVEEFLREKNIMVHG 530
VAS + + + G + G+ +P EGP ++V YH + + LY L FL +K + +
Sbjct: 57 VASFWDIYARIWHGYELHGVENLP-EGPGIVVYYHGAIPIDYLYFLSRLFLWKKRLCLSV 115
Query: 531 IAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGGAREALHY 590
H F+ RL G+ L+V G +P L V + PGG REAL +
Sbjct: 116 ADH---FVFRLP------GLKLLLEVTGVMPGTREECLSALKNGHLVSISPGGVREAL-F 165
Query: 591 KGEEYKLFWPEQQEFVRMAARFGATIVP 618
E Y+L W ++ F ++A I+P
Sbjct: 166 SDESYQLMWGNRKGFAQVALDAKVPIIP 193
|
|
| ZFIN|ZDB-GENE-040426-1267 tmem68 "transmembrane protein 68" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 125 (49.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 37/135 (27%), Positives = 63/135 (46%)
Query: 485 GKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENS 544
G + GL +P+EGP L+V YH + + Y + + +K H +A + FL ++
Sbjct: 110 GYEIHGLDKIPDEGPALIVYYHGAIPVDYYYFLATVIIQKGRTCHSVA--DHFLFKVP-- 165
Query: 545 SNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVL-LYPGGAREALHYKGEEYKLFWPEQQ 603
G L+V + + L H+L + PGG REAL + E Y L W +++
Sbjct: 166 ----GFKLLLEVFSVIHGPQEECVRALRN-GHLLGISPGGVREAL-FSDETYPLLWGKRK 219
Query: 604 EFVRMAARFGATIVP 618
F ++A ++P
Sbjct: 220 GFAQVAIDSKVPVIP 234
|
|
| FB|FBgn0085377 CG34348 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 118 (46.6 bits), Expect = 0.00062, P = 0.00062
Identities = 36/134 (26%), Positives = 61/134 (45%)
Query: 485 GKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENS 544
G V GL VP EGP L+V YH + ++Y L L ++ +++ I + FL +L
Sbjct: 96 GYEVIGLENVPQEGPALIVYYHGAIPIDMYYLNSRMLLQRERLIYTIG--DRFLFKLPG- 152
Query: 545 SNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQE 604
+G + P ++ +L + + + PGG EA + Y+L W +
Sbjct: 153 ---WGTIS--EAFHVSPGTVQSCVSILRDGNLLAISPGGVYEA-QFGDHYYELLWRNRVG 206
Query: 605 FVRMAARFGATIVP 618
F ++A A I+P
Sbjct: 207 FAKVAIEAKAPIIP 220
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.139 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 756 712 0.00084 121 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 620 (66 KB)
Total size of DFA: 344 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 60.15u 0.22s 60.37t Elapsed: 00:00:02
Total cpu time: 60.15u 0.22s 60.37t Elapsed: 00:00:02
Start: Tue May 21 11:32:16 2013 End: Tue May 21 11:32:18 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9ZVN2 | Y1457_ARATH | 2, ., 3, ., 1, ., - | 0.6193 | 0.9113 | 0.9786 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 756 | |||
| cd07987 | 212 | cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltra | 1e-35 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 2e-05 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 6e-05 | |
| pfam03982 | 297 | pfam03982, DAGAT, Diacylglycerol acyltransferase | 6e-05 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 8e-04 | |
| pfam00975 | 224 | pfam00975, Thioesterase, Thioesterase domain | 0.004 |
| >gnl|CDD|153249 cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 1e-35
Identities = 65/236 (27%), Positives = 96/236 (40%), Gaps = 38/236 (16%)
Query: 485 GKIVKGLAGVPNEGPVLLVGYHMLLGFELYSL-VEEFLREKNIMVHGIAHPEIFLGRLEN 543
V+GL +P+EGP LLV H L + L L + +A +F
Sbjct: 7 VYEVRGLENIPDEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALADHFLFPL---- 62
Query: 544 SSNEFGMTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQ 603
G+ D L+ +GAVP + N +LL VL++PGGAREAL K EEY L W +++
Sbjct: 63 ----PGLRDLLRRLGAVPGSRENCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRK 118
Query: 604 EFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLMSIPVINDCVRELARDTVNIRDDTRG 663
F R+A R GA IVP GE+++ V+ D + +
Sbjct: 119 GFARLALRAGAPIVPVFTFGEEEL------------FRVLGDPDGPVGK----------- 155
Query: 664 EVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENANELYLHIKSQVER 719
F L Y +FG+PI + E+ EL+ + +
Sbjct: 156 ------RLFRLLPLPRRLPLYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAALRE 205
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins. Length = 212 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.9 bits (110), Expect = 2e-05
Identities = 52/265 (19%), Positives = 82/265 (30%), Gaps = 16/265 (6%)
Query: 178 GSPTLLFLPGIDGLG---LGLILHHKPLGKAFEVRCLHIPVYDRTPFEG--LVKFVEETV 232
G P L+ L G G + L + V + + R+ G L + ++
Sbjct: 20 GGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLA 79
Query: 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILK 292
A EK + LVG S GG +ALA+A R+P L+L PA G + P
Sbjct: 80 ALLDALGLEKVV-LVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGA 138
Query: 293 AMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDII 352
A LL + L+ L A L + +
Sbjct: 139 APLAA---LADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFAR 195
Query: 353 PKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLP---SEDEAKRLNNSLQNC 409
L L L + L++ D ++P + A L N +
Sbjct: 196 AARADLAAALLALLDRDLRA-ALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLV 254
Query: 410 IVRNFKDNGHTLLLEEGISLLTIIK 434
++ GH LE + +
Sbjct: 255 VIP---GAGHFPHLEAPEAFAAALL 276
|
Length = 282 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 6e-05
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL- 287
E V + PE I LVG S GG +AL +AAR+P + ++L+ L L
Sbjct: 46 AEAVLADAPLDPE-RIVLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPPDALDDLAKLT 104
Query: 288 FPIL 291
P+L
Sbjct: 105 VPVL 108
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|112781 pfam03982, DAGAT, Diacylglycerol acyltransferase | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 6e-05
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 552 DWLKVMGAVPVAARNLFKLLS---TKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRM 608
+ L +G + V+ ++ +L V+L GGA EAL ++ L ++ FVR+
Sbjct: 115 EILLSLGLIEVSRESIEYVLDKCGKGRAVVLVVGGAAEALEAHPGKHTLTLKNRKGFVRI 174
Query: 609 AARFGATIVPFGAVGEDDI 627
A + GA +VP + GE+D+
Sbjct: 175 ALKTGADLVPVYSFGENDV 193
|
The terminal step of triacylglycerol (TAG) formation is catalyzed by the enzyme diacylglycerol acyltransferase (DAGAT). Length = 297 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 8e-04
Identities = 41/220 (18%), Positives = 67/220 (30%), Gaps = 29/220 (13%)
Query: 214 PVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLI--LI 271
+ F+ L + +E + + LVG S GG +ALA AA+ P D + L+
Sbjct: 18 KDFADYRFDDLAEDLE-ALLDAL---GLDKVNLVGHSMGGLIALAYAAKYP--DRVKALV 71
Query: 272 LSNPATSFG---RSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328
L G + L IK +
Sbjct: 72 LVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALLGRA--IKQFQALGRPFVSDF 129
Query: 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG 388
+K +LS+ + D LL + + L + L++
Sbjct: 130 LKQFELSSLIRFGETLA--------LDGLLGYALGYDLVWDRS-AALKDIDVPTLIIWGD 180
Query: 389 KDNMLP---SEDEAKRLNNSLQNCIVRNFKDNGHTLLLEE 425
D ++P SE A N+ + D GH LE+
Sbjct: 181 DDPLVPPDASEKLAALFPNAQ----LVVIDDAGHLAQLEK 216
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|216224 pfam00975, Thioesterase, Thioesterase domain | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.004
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVA----ARNPTIDLILILSNPA 276
E L + E +RR PE P L G S GG LA VA R +++ A
Sbjct: 47 IEELAEEYAEALRRIQ---PEGPYALFGHSMGGLLAFEVARRLERRGEEPAGLILSDAYA 103
Query: 277 TSFGRSQ 283
FGR +
Sbjct: 104 PHFGRRE 110
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. Length = 224 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 756 | |||
| cd07987 | 212 | LPLAT_MGAT-like Lysophospholipid Acyltransferases | 99.97 | |
| PLN02783 | 315 | diacylglycerol O-acyltransferase | 99.96 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.93 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.93 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.93 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.92 | |
| PF03982 | 297 | DAGAT: Diacylglycerol acyltransferase ; InterPro: | 99.92 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.92 | |
| PLN02578 | 354 | hydrolase | 99.91 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.91 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.91 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.91 | |
| PRK15018 | 245 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr | 99.91 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.91 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.91 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.91 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.91 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.91 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.9 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.9 | |
| cd07986 | 210 | LPLAT_ACT14924-like Lysophospholipid Acyltransfera | 99.9 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.9 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.9 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.9 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.9 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.9 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.9 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.89 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.89 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.89 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.89 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.88 | |
| PTZ00261 | 355 | acyltransferase; Provisional | 99.88 | |
| cd07992 | 203 | LPLAT_AAK14816-like Lysophospholipid Acyltransfera | 99.88 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.87 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.87 | |
| KOG2848 | 276 | consensus 1-acyl-sn-glycerol-3-phosphate acyltrans | 99.86 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.86 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.86 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.86 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.86 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.85 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.85 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.85 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.85 | |
| PLN02901 | 214 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 99.85 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.84 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.84 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.83 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.83 | |
| PLN02511 | 388 | hydrolase | 99.82 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.81 | |
| KOG0831 | 334 | consensus Acyl-CoA:diacylglycerol acyltransferase | 99.81 | |
| cd07988 | 163 | LPLAT_ABO13168-like Lysophospholipid Acyltransfera | 99.81 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.8 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.79 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.79 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.78 | |
| COG0204 | 255 | PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas | 99.77 | |
| cd07985 | 235 | LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA | 99.77 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.77 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.75 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.75 | |
| PRK08043 | 718 | bifunctional acyl-[acyl carrier protein] synthetas | 99.74 | |
| cd07991 | 211 | LPLAT_LPCAT1-like Lysophospholipid Acyltransferase | 99.74 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.73 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 99.73 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.72 | |
| TIGR00530 | 130 | AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra | 99.71 | |
| cd07983 | 189 | LPLAT_DUF374-like Lysophospholipid Acyltransferase | 99.7 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 99.7 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.7 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.69 | |
| cd06551 | 187 | LPLAT Lysophospholipid acyltransferases (LPLATs) o | 99.69 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.68 | |
| PRK10566 | 249 | esterase; Provisional | 99.67 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.66 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.66 | |
| PF01553 | 132 | Acyltransferase: Acyltransferase; InterPro: IPR002 | 99.65 | |
| KOG4321 | 279 | consensus Predicted phosphate acyltransferases [Li | 99.65 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.64 | |
| cd07993 | 205 | LPLAT_DHAPAT-like Lysophospholipid Acyltransferase | 99.64 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.61 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.61 | |
| PRK14014 | 301 | putative acyltransferase; Provisional | 99.55 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.55 | |
| cd07989 | 184 | LPLAT_AGPAT-like Lysophospholipid Acyltransferases | 99.52 | |
| PRK03355 | 783 | glycerol-3-phosphate acyltransferase; Validated | 99.52 | |
| TIGR03703 | 799 | plsB glycerol-3-phosphate O-acyltransferase. Membe | 99.51 | |
| PLN02833 | 376 | glycerol acyltransferase family protein | 99.51 | |
| PRK04974 | 818 | glycerol-3-phosphate acyltransferase; Validated | 99.5 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.49 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.49 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.48 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.46 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.44 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.44 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 99.43 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 99.42 | |
| PLN00021 | 313 | chlorophyllase | 99.4 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 99.4 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.38 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.38 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.37 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.35 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.35 | |
| cd07984 | 192 | LPLAT_LABLAT-like Lysophospholipid Acyltransferase | 99.35 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.35 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.32 | |
| smart00563 | 118 | PlsC Phosphate acyltransferases. Function in phosp | 99.32 | |
| KOG2847 | 286 | consensus Phosphate acyltransferase [Lipid transpo | 99.3 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.28 | |
| PLN02510 | 374 | probable 1-acyl-sn-glycerol-3-phosphate acyltransf | 99.28 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.26 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.26 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.26 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.26 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.22 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.22 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.19 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.19 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.18 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.16 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.13 | |
| PLN02588 | 525 | glycerol-3-phosphate acyltransferase | 99.12 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.12 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.08 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.07 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.06 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.06 | |
| cd07990 | 193 | LPLAT_LCLAT1-like Lysophospholipid Acyltransferase | 99.03 | |
| PRK10115 | 686 | protease 2; Provisional | 99.03 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 98.99 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 98.98 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 98.95 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 98.91 | |
| PRK11915 | 621 | glycerol-3-phosphate acyltransferase; Reviewed | 98.91 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 98.9 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.88 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 98.87 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 98.84 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 98.82 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.81 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 98.81 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 98.78 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 98.78 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 98.77 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.75 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 98.72 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.71 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 98.7 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.68 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 98.65 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.62 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 98.61 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.57 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.57 | |
| PLN02380 | 376 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 98.56 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.56 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.55 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.55 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 98.53 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.49 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.47 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.46 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.44 | |
| PRK08419 | 298 | lipid A biosynthesis lauroyl acyltransferase; Revi | 98.4 | |
| COG2121 | 214 | Uncharacterized protein conserved in bacteria [Fun | 98.35 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.35 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.33 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.3 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.27 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.22 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.21 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.2 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.17 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 98.17 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.17 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.13 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.12 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.11 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.1 | |
| COG3176 | 292 | Putative hemolysin [General function prediction on | 98.08 | |
| PRK07920 | 298 | lipid A biosynthesis lauroyl acyltransferase; Prov | 98.08 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 97.96 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 97.95 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 97.95 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 97.93 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 97.91 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 97.83 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 97.8 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 97.79 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 97.66 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 97.65 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.64 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.63 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 97.6 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 97.57 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 97.55 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 97.52 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 97.48 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 97.47 | |
| PF03279 | 295 | Lip_A_acyltrans: Bacterial lipid A biosynthesis ac | 97.46 | |
| PRK06628 | 290 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.46 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 97.45 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.43 | |
| COG2937 | 810 | PlsB Glycerol-3-phosphate O-acyltransferase [Lipid | 97.4 | |
| PRK06553 | 308 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.29 | |
| PLN02349 | 426 | glycerol-3-phosphate acyltransferase | 97.22 | |
| COG1560 | 308 | HtrB Lauroyl/myristoyl acyltransferase [Cell envel | 97.12 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.06 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 97.01 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 96.94 | |
| PRK06946 | 293 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.89 | |
| PRK05646 | 310 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.89 | |
| PRK08943 | 314 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA ac | 96.85 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 96.84 | |
| PRK06860 | 309 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.8 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 96.79 | |
| PRK08733 | 306 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.76 | |
| PRK08706 | 289 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.75 | |
| TIGR02208 | 305 | lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl) | 96.73 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 96.72 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 96.69 | |
| TIGR02207 | 303 | lipid_A_htrB lipid A biosynthesis lauroyl (or palm | 96.67 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 96.56 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 96.52 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 96.51 | |
| PRK05906 | 454 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.51 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 96.5 | |
| KOG3729 | 715 | consensus Mitochondrial glycerol-3-phosphate acylt | 96.48 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 96.37 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 96.36 | |
| KOG1505 | 346 | consensus Lysophosphatidic acid acyltransferase LP | 96.32 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 96.32 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 96.29 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 96.26 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 96.15 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 96.12 | |
| PRK08025 | 305 | lipid A biosynthesis palmitoleoyl acyltransferase; | 96.11 | |
| PRK08734 | 305 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.09 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 96.06 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 95.97 | |
| PRK08905 | 289 | lipid A biosynthesis lauroyl acyltransferase; Vali | 95.93 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 95.77 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.64 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 95.62 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 95.46 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 95.34 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 95.3 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 95.19 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 95.12 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 94.85 | |
| PLN02209 | 437 | serine carboxypeptidase | 94.65 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 94.6 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 94.41 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 94.17 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 94.15 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 94.15 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 94.02 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 93.97 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 93.97 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 93.93 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 93.84 | |
| PRK05645 | 295 | lipid A biosynthesis lauroyl acyltransferase; Prov | 93.77 | |
| KOG3730 | 685 | consensus Acyl-CoA:dihydroxyactetone-phosphate acy | 93.09 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 93.0 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 93.0 | |
| PLN02454 | 414 | triacylglycerol lipase | 92.21 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 92.15 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 91.77 | |
| PLN02162 | 475 | triacylglycerol lipase | 91.32 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 91.1 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 91.07 | |
| PLN02310 | 405 | triacylglycerol lipase | 90.81 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 90.8 | |
| PLN02847 | 633 | triacylglycerol lipase | 90.43 | |
| PLN02571 | 413 | triacylglycerol lipase | 90.34 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 90.17 | |
| PLN00413 | 479 | triacylglycerol lipase | 90.03 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 90.01 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 89.9 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 89.44 | |
| PLN02934 | 515 | triacylglycerol lipase | 89.41 | |
| PLN02408 | 365 | phospholipase A1 | 88.49 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 88.11 | |
| PLN02324 | 415 | triacylglycerol lipase | 86.59 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 86.57 | |
| PLN02753 | 531 | triacylglycerol lipase | 86.0 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 85.78 | |
| PLN02761 | 527 | lipase class 3 family protein | 85.31 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 84.87 | |
| PLN02802 | 509 | triacylglycerol lipase | 84.78 | |
| PLN02719 | 518 | triacylglycerol lipase | 84.56 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 81.01 |
| >cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=255.35 Aligned_cols=202 Identities=32% Similarity=0.455 Sum_probs=164.7
Q ss_pred EEecccCCCCCCCEEEEecCCCchhhHHHHHHH-HHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCHH
Q 004396 487 IVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEE-FLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAAR 565 (756)
Q Consensus 487 ~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~-~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~~ 565 (756)
+|+|.||+|++||+|+|+||+++.+|++++... .....++.++++++..+|.. |+++++++.+|+++++|+
T Consensus 9 ~v~g~e~lp~~~~~i~v~NH~s~~~D~~~l~~~~~~~~~~~~~~~la~~~~~~~--------p~~~~~~~~~g~i~~~r~ 80 (212)
T cd07987 9 EVRGLENIPDEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALADHFLFPL--------PGLRDLLRRLGAVPGSRE 80 (212)
T ss_pred EEeccccCCCCCcEEEEECCcchhHHHHHHHHHHHHhCCCCeeEEeecccceeC--------ccHHHHHHHcCCcccCHH
Confidence 899999999999999999999885599888777 33344688999999999976 679999999999999999
Q ss_pred hHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhhhhcCccccccccchHH
Q 004396 566 NLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLMSIPVIND 645 (756)
Q Consensus 566 ~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~~~~~~~~~~~~~~~ 645 (756)
++.++|++|++|+|||||+||+.....+++...+++|+||++||.++|+|||||++.|+++.++...+... +.+.+
T Consensus 81 ~~~~~L~~G~~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~----~~~~~ 156 (212)
T cd07987 81 NCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRKGFARLALRAGAPIVPVFTFGEEELFRVLGDPDG----PVGKR 156 (212)
T ss_pred HHHHHhcCCCEEEEEcCCHHHHhccCCCeEEEEECCCcCHHHHHHHcCCCeEeEEEeCcHHHHhhhccCCC----Cceee
Confidence 99999999999999999999988765667777889999999999999999999999999999765544221 00000
Q ss_pred HHHHhhcccccccccccccccccccccCccCCCCCceEEEEeCCcccCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 004396 646 CVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENANELYLHIKSQVERCLDYLL 725 (756)
Q Consensus 646 ~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~~p~~p~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~v~~~v~~~~~~l~ 725 (756)
.+ .++.-+.++++.++||+||++........+++.+++++++++++|++++++.+
T Consensus 157 -----------~~--------------~~l~~p~~~~i~v~~G~Pi~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 211 (212)
T cd07987 157 -----------LF--------------RLLPLPRRLPLYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAALRELIEKHK 211 (212)
T ss_pred -----------hh--------------ceeccCCCCcceEEeCCCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00 01111235789999999999986544557899999999999999998877653
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins. |
| >PLN02783 diacylglycerol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=256.31 Aligned_cols=213 Identities=15% Similarity=0.205 Sum_probs=166.7
Q ss_pred CcEEecccCCCCCCCEEEEecCCCchhhHHHHHHH-HHHhcC-ceeccccccccccccccccCCCccHHHHHHHcCcccc
Q 004396 485 GKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEE-FLREKN-IMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPV 562 (756)
Q Consensus 485 ~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~-~~~~~~-~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v 562 (756)
..+++|.||+|+++++||++||++. +|..++... .....+ +.++++|++++|+. |+++++++++|++||
T Consensus 88 ~v~v~g~e~l~~~~~~I~~~nH~S~-ldi~~~~~~~~~~~~p~~~~~~lak~~lf~i--------P~~g~~~~~~G~ipv 158 (315)
T PLN02783 88 RLHVEDEEAFDPNRAYVFGYEPHSV-LPIGVIALADLSGFLPLPKIRALASSAVFYT--------PFLRHIWTWLGLDPA 158 (315)
T ss_pred EEEEEchhhCCCCCCEEEEECCCcc-hhhHHHhhhhhhhccCCCchHHHhhhhhccC--------cHHHHHHHHcCCeEE
Confidence 4578999999999999999999955 465443221 122233 67999999999987 799999999999999
Q ss_pred CHHhHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhhhhcCccccccccc
Q 004396 563 AARNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLMSIPV 642 (756)
Q Consensus 563 ~~~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~~~~~~~~~~~~ 642 (756)
+|+++.++|++|.+|+|||||+||+.+...+....++++|+||+++|.++|+|||||+++|+++++..+.... ++
T Consensus 159 ~R~~~~~~Lk~G~sv~IfPeGtre~~~~~~~~~~~~~~~k~G~~~lA~~~g~PIVPv~i~G~~~~~~~~~~~~-----~~ 233 (315)
T PLN02783 159 SRKNFTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPLVPVFCFGQTRAYKWWKPGG-----PL 233 (315)
T ss_pred cHHHHHHHHhCCCEEEEEcCCchhhcccCCCccccccCCCCcHHHHHHHcCCCEEEEEEECchhhhhhhcCCc-----cH
Confidence 9999999999999999999999998877666777778999999999999999999999999999986553211 23
Q ss_pred hHHHHHHhhcccccccccccccccccccccCc----cCCCCCceEEEEeCCcccCCCCCCcCCCHHHHHHHHHHHHHHHH
Q 004396 643 INDCVRELARDTVNIRDDTRGEVANQALFFPG----LLPKVPGRFYYLFGKPIQTKGREVSLKDKENANELYLHIKSQVE 718 (756)
Q Consensus 643 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg----~~p~~p~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~v~~~v~ 718 (756)
..++-+.++-. .+.+.| ..| +|.+++++||+||+++... .+++|.++++++++.++++
T Consensus 234 ~~~l~r~~~~~---------------p~~~wg~~~~piP-~~~~i~vvvG~PI~v~~~~--~~~~e~v~~~~~~~~~al~ 295 (315)
T PLN02783 234 VPKLSRAIGFT---------------PIVFWGRYGSPIP-HRTPMHVVVGKPIEVKKNP--QPSQEEVAEVLEQFVEALQ 295 (315)
T ss_pred HHHHHHhcCcC---------------ceeeecccCcccC-CCceEEEEecCCccCCCCC--CCCHHHHHHHHHHHHHHHH
Confidence 33333322210 111111 133 3689999999999998642 3678899999999999999
Q ss_pred HHHHHHHHHhc
Q 004396 719 RCLDYLLKKRE 729 (756)
Q Consensus 719 ~~~~~l~~~r~ 729 (756)
+++++.+.+.+
T Consensus 296 ~L~~~~k~~~g 306 (315)
T PLN02783 296 DLFEKHKARAG 306 (315)
T ss_pred HHHHHHHHhcC
Confidence 99999888764
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.1e-25 Score=233.25 Aligned_cols=249 Identities=18% Similarity=0.164 Sum_probs=157.4
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC--------------hhHHHHHHHHHH
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--------------FEGLVKFVEETV 232 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss--------------~~~~a~dv~~~i 232 (756)
++|...|. ++|+|||+||++++...|..+++.|++.|+|+++|+||||.|+ ++++++++.+++
T Consensus 20 i~y~~~G~---~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l 96 (294)
T PLN02824 20 IRYQRAGT---SGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFC 96 (294)
T ss_pred EEEEEcCC---CCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHH
Confidence 45666664 2589999999999999999999999888999999999999872 578899999999
Q ss_pred HHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCc-CCcCCc-hhHHhhchhHHHH-hH-HhHhhh
Q 004396 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGR-SQLQPL-FPILKAMPDELHC-AV-PYLLSY 308 (756)
Q Consensus 233 ~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~-~~~~~~-~~~~~~~~~~~~~-~~-~~~~~~ 308 (756)
+++..+ +++|+||||||.+|+.+|.++|++|+++|++++...... ...... .+....+...... .. ..++..
T Consensus 97 ~~l~~~----~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (294)
T PLN02824 97 SDVVGD----PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKS 172 (294)
T ss_pred HHhcCC----CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHh
Confidence 987654 899999999999999999999999999999998542111 110000 0111111000000 00 000000
Q ss_pred hcCChhHHHHHhhhc-CCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH-HHHHhhhccCCCCcEEEEE
Q 004396 309 VMGDPIKMAMVNIEN-RLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHAVKAEVLVLA 386 (756)
Q Consensus 309 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLvI~ 386 (756)
. ...... ...... ..............+.. ..............+... .......+.++++|+|+|+
T Consensus 173 ~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~ 241 (294)
T PLN02824 173 V-ATPETV-KNILCQCYHDDSAVTDELVEAILR---------PGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAW 241 (294)
T ss_pred h-cCHHHH-HHHHHHhccChhhccHHHHHHHHh---------ccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEE
Confidence 0 000000 000000 00000000000000000 000000111111111100 0011255788999999999
Q ss_pred eCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 387 G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
|++|.+++.+. ++.+.+..+++++++++++||++++|+|+++++.|.
T Consensus 242 G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 288 (294)
T PLN02824 242 GEKDPWEPVEL-GRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIE 288 (294)
T ss_pred ecCCCCCChHH-HHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHH
Confidence 99999999985 888888888899999999999999999999999998
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-25 Score=229.02 Aligned_cols=238 Identities=16% Similarity=0.197 Sum_probs=149.8
Q ss_pred eeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC------ChhHHHHHHHHHHHHhhccCCC
Q 004396 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPE 241 (756)
Q Consensus 168 ~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S------s~~~~a~dv~~~i~~l~~~~~~ 241 (756)
+|...|+ +.|+|||+||++++...|..+++.|.+.|+|+++|+||||.| +++++++++.+ +. .
T Consensus 5 ~y~~~G~---g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~----~~----~ 73 (256)
T PRK10349 5 WWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ----QA----P 73 (256)
T ss_pred chhhcCC---CCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCHHHHHHHHHh----cC----C
Confidence 4556665 345799999999999999999999988899999999999998 34555554432 22 2
Q ss_pred CCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCC-cCCch-hHHhhchhHHHHhHHhHhhhhcCChhHHHHH
Q 004396 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQ-LQPLF-PILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (756)
Q Consensus 242 ~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (756)
++++||||||||.+|+.+|.++|++++++|++++........ +.... .....+...+.......+..+. ..
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 146 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFL-------AL 146 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHH-------HH
Confidence 489999999999999999999999999999999865432211 11110 0111110000000000000000 00
Q ss_pred hhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCC-hhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHH
Q 004396 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398 (756)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~ 398 (756)
..............+...+. ....+ ...+......+.. .+..+.+.++++|+|+|+|++|.++|.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lii~G~~D~~~~~~~- 214 (256)
T PRK10349 147 QTMGTETARQDARALKKTVL---------ALPMPEVDVLNGGLEILKT--VDLRQPLQNVSMPFLRLYGYLDGLVPRKV- 214 (256)
T ss_pred HHccCchHHHHHHHHHHHhh---------ccCCCcHHHHHHHHHHHHh--CccHHHHhhcCCCeEEEecCCCccCCHHH-
Confidence 00000000000000000000 00000 1111111111111 12346788999999999999999999985
Q ss_pred HHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 399 AKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 399 ~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++.+.+.++++++++++++||++++|+|+.|++.+.+
T Consensus 215 ~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~ 251 (256)
T PRK10349 215 VPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVA 251 (256)
T ss_pred HHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHH
Confidence 8999999999999999999999999999999999983
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-25 Score=230.19 Aligned_cols=237 Identities=22% Similarity=0.246 Sum_probs=155.2
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
++++|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++++.++++.++.. +++|+|||
T Consensus 24 ~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~~~----~~~LvG~S 99 (276)
T TIGR02240 24 GLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLDYG----QVNAIGVS 99 (276)
T ss_pred CCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCcC----ceEEEEEC
Confidence 457899999999999999999999988999999999999998 4789999999999997655 89999999
Q ss_pred hhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHH
Q 004396 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (756)
Q Consensus 251 ~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (756)
|||.+|+.+|.++|++++++||++++.......... .......... .......................+ ..
T Consensus 100 ~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~ 171 (276)
T TIGR02240 100 WGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKP--KVLMMMASPR-----RYIQPSHGIHIAPDIYGGAFRRDP-EL 171 (276)
T ss_pred HHHHHHHHHHHHCHHHhhheEEeccCCccccCCCch--hHHHHhcCch-----hhhccccccchhhhhccceeeccc-hh
Confidence 999999999999999999999999876421111100 0000000000 000000000000000000000000 00
Q ss_pred HHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeE
Q 004396 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (756)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~ 410 (756)
....... ... .......+. ............+.++++|+|+|+|++|++++++. ++++.+.+++++
T Consensus 172 ~~~~~~~----------~~~-~~~~~~~~~--~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~-~~~l~~~~~~~~ 237 (276)
T TIGR02240 172 AMAHASK----------VRS-GGKLGYYWQ--LFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLIN-MRLLAWRIPNAE 237 (276)
T ss_pred hhhhhhh----------ccc-CCCchHHHH--HHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHH-HHHHHHhCCCCE
Confidence 0000000 000 000001111 11111111125578999999999999999999995 999999999999
Q ss_pred EEEEcCCCCcccccchhhHHHHhhhccccccCc
Q 004396 411 VRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (756)
Q Consensus 411 l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr~~ 443 (756)
++++++ ||++++|+|+++++.|. .|+.+..
T Consensus 238 ~~~i~~-gH~~~~e~p~~~~~~i~--~fl~~~~ 267 (276)
T TIGR02240 238 LHIIDD-GHLFLITRAEAVAPIIM--KFLAEER 267 (276)
T ss_pred EEEEcC-CCchhhccHHHHHHHHH--HHHHHhh
Confidence 999985 99999999999999999 4555433
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-24 Score=227.71 Aligned_cols=259 Identities=11% Similarity=0.057 Sum_probs=156.1
Q ss_pred cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHHHH
Q 004396 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEE 230 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~ 230 (756)
+.+|.. ++|.+.|+ +|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.+
T Consensus 13 ~~~g~~---i~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ 85 (295)
T PRK03592 13 EVLGSR---MAYIETGE----GDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDA 85 (295)
T ss_pred EECCEE---EEEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 335544 46666675 68999999999999999999999987789999999999999 58889999999
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhc
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (756)
++++++.. +++++||||||.+|+.+|.++|++|+++|++++..... .+.............+.. +.......
T Consensus 86 ll~~l~~~----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~ 157 (295)
T PRK03592 86 WFDALGLD----DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPM--TWDDFPPAVRELFQALRS--PGEGEEMV 157 (295)
T ss_pred HHHHhCCC----CeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCc--chhhcchhHHHHHHHHhC--cccccccc
Confidence 99997654 89999999999999999999999999999999843211 111000000000000000 00000000
Q ss_pred CChhHHHHHhhh----cCCChHHHHHHHHhhhhhhh--hhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEE
Q 004396 311 GDPIKMAMVNIE----NRLPPRIKLEQLSNNLPALL--PRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (756)
Q Consensus 311 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLv 384 (756)
............ ....+ +....+...+.... .................. ...........+.++++|+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~i~~P~li 233 (295)
T PRK03592 158 LEENVFIERVLPGSILRPLSD-EEMAVYRRPFPTPESRRPTLSWPRELPIDGEPAD---VVALVEEYAQWLATSDVPKLL 233 (295)
T ss_pred cchhhHHhhcccCcccccCCH-HHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchh---hHhhhhHhHHHhccCCCCeEE
Confidence 000000000000 00000 00000100000000 000000000000000000 000011123567889999999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 385 LASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 385 I~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|+|++|.++++....+.+.+..+++++++++++||++++|+|+++++.|.+
T Consensus 234 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~ 284 (295)
T PRK03592 234 INAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAA 284 (295)
T ss_pred EeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHH
Confidence 999999999555323444556789999999999999999999999999983
|
|
| >PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.9e-25 Score=226.83 Aligned_cols=225 Identities=23% Similarity=0.286 Sum_probs=168.9
Q ss_pred EecccCCCCCCCEEEEecCC--CchhhHHHHH----HHHHHhc-CceeccccccccccccccccCCCccHHHHHHHcCcc
Q 004396 488 VKGLAGVPNEGPVLLVGYHM--LLGFELYSLV----EEFLREK-NIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAV 560 (756)
Q Consensus 488 v~g~~~lp~~gp~l~v~NH~--~~~~d~~~l~----~~~~~~~-~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v 560 (756)
+..-+.+|+++.+|| +.|+ .+++..++.. ..+.... +...+.++...+|.. |++|+++.++|++
T Consensus 53 l~~~~~l~p~~~Yif-~~hPHGvl~~g~~~~f~t~~~~~~~~fpg~~~~~~tl~~~f~~--------P~~R~~~~~~G~~ 123 (297)
T PF03982_consen 53 LVKTADLDPDKNYIF-GFHPHGVLPIGAFVNFATDATGFSKLFPGIRPHLLTLSVNFRI--------PFFRDFLLWLGAV 123 (297)
T ss_pred EEecccCCcCCceEE-eeCCCccccCcchhcccccccCcchhCCCcceeEEEeccceec--------cccchhhhhcccc
Confidence 334567998888777 5566 5555553322 1222222 345566666677776 7999999999999
Q ss_pred ccCHHhHHHHhcC---CCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhhhhcCcccc
Q 004396 561 PVAARNLFKLLST---KSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDL 637 (756)
Q Consensus 561 ~v~~~~~~~~l~~---g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~~~~~~~ 637 (756)
+++|+++.++|++ |++|+|+|||.+|++..+++++++.|+.|+||+|+|+++|+|||||+.+||+|+|+.+.....
T Consensus 124 ~~sr~s~~~~L~~~~~G~~v~ivpGG~~E~l~~~p~~~~l~lk~RkGFvklAl~~Ga~LVPv~~FGE~d~~~~~~~~~~- 202 (297)
T PF03982_consen 124 SASRESIRYLLSRGGSGNAVVIVPGGAAEALLAHPGRERLYLKNRKGFVKLALQHGAPLVPVYSFGENDLYDQVQNPPG- 202 (297)
T ss_pred cccccccceeecccCCCceeeeccCcHHHHhhcCCCceEEEECCcchHHHhHHHcCCcEEeEEEeCChhheeeccCCch-
Confidence 9999999999997 556999999999999999999999999999999999999999999999999999887644331
Q ss_pred ccccchHHHHHHhhccccccccccccccccccccc---CccCCCCCceEEEEeCCcccCCCCCCcCCCHHHHHHHHHHHH
Q 004396 638 MSIPVINDCVRELARDTVNIRDDTRGEVANQALFF---PGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENANELYLHIK 714 (756)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~---pg~~p~~p~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~v~ 714 (756)
..+.+++.++++..+...-+.. ++.++- .|++|. +.+++++||+||+++.. +.+++|++++++++..
T Consensus 203 ~~~r~~q~~~~~~~g~~~~~f~-------Grg~f~~~~~gllP~-r~pi~~VVG~PI~v~~~--~~Pt~e~Vd~~H~~Y~ 272 (297)
T PF03982_consen 203 SWLRRFQRWLKKKFGFSLPLFW-------GRGIFPSYSFGLLPY-RRPITTVVGKPIPVPKI--ENPTQEDVDKLHARYI 272 (297)
T ss_pred hHHHHHHHHHHHHcCcceeeee-------cccccCCCccccccc-CCceEEEeeceecccCC--CCcCHHHHHHHHHHHH
Confidence 2222344455444443333322 111111 155664 78999999999999865 5678999999999999
Q ss_pred HHHHHHHHHHHHHhccCC
Q 004396 715 SQVERCLDYLLKKREEDP 732 (756)
Q Consensus 715 ~~v~~~~~~l~~~r~~~~ 732 (756)
+++++++++.+.+...++
T Consensus 273 ~~L~~LFd~~K~~~g~~~ 290 (297)
T PF03982_consen 273 EALRELFDKHKAKYGYPP 290 (297)
T ss_pred HHHHHHHHHHHHhcCCCC
Confidence 999999999999987544
|
; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups |
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-23 Score=227.60 Aligned_cols=254 Identities=14% Similarity=0.149 Sum_probs=153.4
Q ss_pred eeeccCCCC--CCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhh
Q 004396 167 FCPVDCGRP--LKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREH 236 (756)
Q Consensus 167 ~~~~~~G~~--~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~ 236 (756)
++|.+.|+. .+++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++.+.
T Consensus 74 i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~ 153 (360)
T PLN02679 74 INYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVV 153 (360)
T ss_pred EEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhc
Confidence 466666641 11358999999999999999999999988999999999999988 36789999999999876
Q ss_pred ccCCCCCEEEEEeChhhHHHHHHHHh-CCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhH--HHH------hHHhHhh
Q 004396 237 ASSPEKPIYLVGDSFGGCLALAVAAR-NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDE--LHC------AVPYLLS 307 (756)
Q Consensus 237 ~~~~~~~v~LvGhS~GG~vAl~~A~~-~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~ 307 (756)
.. +++|+||||||.+++.+|+. +|++|+++|+++++..................+.. ... ....++.
T Consensus 154 ~~----~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (360)
T PLN02679 154 QK----PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFN 229 (360)
T ss_pred CC----CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHH
Confidence 54 89999999999999998874 79999999999986533211100000000000000 000 0000000
Q ss_pred hhcCCh-hHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH-HHHHHhhhccCCCCcEEEE
Q 004396 308 YVMGDP-IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS-ASAYANSRLHAVKAEVLVL 385 (756)
Q Consensus 308 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLvI 385 (756)
...... ............. ...+...+.+.. ................. ........+.++++|+|+|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii 298 (360)
T PLN02679 230 RVKQRDNLKNILLSVYGNKE--AVDDELVEIIRG---------PADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVL 298 (360)
T ss_pred HhcCHHHHHHHHHHhccCcc--cCCHHHHHHHHh---------hccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEE
Confidence 000000 0000000000000 000000000000 00000111111111100 0001125578899999999
Q ss_pred EeCCCCCCCCHH----HHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 386 ASGKDNMLPSED----EAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 386 ~G~~D~~vp~~~----~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+|++|.++|.+. ..+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 299 ~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~ 352 (360)
T PLN02679 299 WGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLP 352 (360)
T ss_pred EeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHH
Confidence 999999998862 12456677899999999999999999999999999983
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-23 Score=225.74 Aligned_cols=249 Identities=16% Similarity=0.155 Sum_probs=157.1
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccC
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASS 239 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~ 239 (756)
++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +.+++++++.++++.+..+
T Consensus 78 i~Y~~~g~----g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~~- 152 (354)
T PLN02578 78 IHYVVQGE----GLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVKE- 152 (354)
T ss_pred EEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhccC-
Confidence 46666665 67899999999999999999999988999999999999998 4677889999999987644
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch------hHHhh-chhHHHHhHHhHhhh----
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF------PILKA-MPDELHCAVPYLLSY---- 308 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~---- 308 (756)
+++++||||||.+++.+|.++|++++++|+++++..+......... ..... ...............
T Consensus 153 ---~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (354)
T PLN02578 153 ---PAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFW 229 (354)
T ss_pred ---CeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999986543322111000 00000 000000000000000
Q ss_pred hcCChhHHHHHhhhcCCC-hHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH-----HHHHhhhccCCCCcE
Q 004396 309 VMGDPIKMAMVNIENRLP-PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-----SAYANSRLHAVKAEV 382 (756)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~Pv 382 (756)
....+..... ....... .....+.+.+.+. ...............+... .....+.+.++++|+
T Consensus 230 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 299 (354)
T PLN02578 230 QAKQPSRIES-VLKSVYKDKSNVDDYLVESIT---------EPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPL 299 (354)
T ss_pred HhcCHHHHHH-HHHHhcCCcccCCHHHHHHHH---------hcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCE
Confidence 0000000000 0000000 0000000000000 0000010110011111110 011235678899999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 383 LVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 383 LvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++|+|++|.+++.+. ++++.+.+++++++++ ++||++++|+|+++++.|.+
T Consensus 300 LiI~G~~D~~v~~~~-~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~ 350 (354)
T PLN02578 300 LLLWGDLDPWVGPAK-AEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLE 350 (354)
T ss_pred EEEEeCCCCCCCHHH-HHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHH
Confidence 999999999999995 9999999999999999 58999999999999999984
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-23 Score=210.58 Aligned_cols=217 Identities=23% Similarity=0.266 Sum_probs=147.3
Q ss_pred EEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC---------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChh
Q 004396 182 LLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (756)
Q Consensus 182 lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S---------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~G 252 (756)
|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.+... +++++|||+|
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~----~~~lvG~S~G 76 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK----KVILVGHSMG 76 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS----SEEEEEETHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc----cccccccccc
Confidence 79999999999999999999999999999999999988 3678899999999997663 8999999999
Q ss_pred hHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHH
Q 004396 253 GCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLE 332 (756)
Q Consensus 253 G~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (756)
|.+++.+|.++|++++++|+++|......... . ......+.......... ............... ....
T Consensus 77 g~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~ 145 (228)
T PF12697_consen 77 GMIALRLAARYPDRVKGLVLLSPPPPLPDSPS---R---SFGPSFIRRLLAWRSRS----LRRLASRFFYRWFDG-DEPE 145 (228)
T ss_dssp HHHHHHHHHHSGGGEEEEEEESESSSHHHHHC---H---HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHTH-HHHH
T ss_pred cccccccccccccccccceeeccccccccccc---c---cccchhhhhhhhccccc----ccccccccccccccc-cccc
Confidence 99999999999999999999999763211100 0 00000010000000000 000000000000000 0000
Q ss_pred HHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH--HHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeE
Q 004396 333 QLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS--ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (756)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~ 410 (756)
.... .........+.. ........+.++++|+++++|++|.+++.+. .+.+.+.+++++
T Consensus 146 ~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~-~~~~~~~~~~~~ 206 (228)
T PF12697_consen 146 DLIR------------------SSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPES-AEELADKLPNAE 206 (228)
T ss_dssp HHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHH-HHHHHHHSTTEE
T ss_pred cccc------------------ccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHH-HHHHHHHCCCCE
Confidence 0000 011111111111 2233346778889999999999999999874 999999999999
Q ss_pred EEEEcCCCCcccccchhhHHHH
Q 004396 411 VRNFKDNGHTLLLEEGISLLTI 432 (756)
Q Consensus 411 l~~i~~aGH~~~~e~p~~~~~~ 432 (756)
+++++++||++++|+|+++++.
T Consensus 207 ~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 207 LVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp EEEETTSSSTHHHHSHHHHHHH
T ss_pred EEEECCCCCccHHHCHHHHhcC
Confidence 9999999999999999999864
|
... |
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=224.28 Aligned_cols=241 Identities=18% Similarity=0.176 Sum_probs=153.1
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC---------ChhHHHHHHHHHHHHhh
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREH 236 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S---------s~~~~a~dv~~~i~~l~ 236 (756)
++|.+.|.+ ++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++++.+++++++
T Consensus 36 i~y~~~G~~--~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~ 113 (302)
T PRK00870 36 MHYVDEGPA--DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLD 113 (302)
T ss_pred EEEEecCCC--CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcC
Confidence 567777763 46899999999999999999999996 5799999999999988 36788999999999865
Q ss_pred ccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHH-HhHHhHhhhhcCChhH
Q 004396 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH-CAVPYLLSYVMGDPIK 315 (756)
Q Consensus 237 ~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 315 (756)
.. +++|+||||||.+|+.+|.++|++|+++|++++........................ ......+.....
T Consensus 114 ~~----~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 185 (302)
T PRK00870 114 LT----DVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTV---- 185 (302)
T ss_pred CC----CEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhcccc----
Confidence 54 899999999999999999999999999999997542211100000000000000000 000000000000
Q ss_pred HHHHhhhcCCChHHHHHHHHhhh-----hhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCC
Q 004396 316 MAMVNIENRLPPRIKLEQLSNNL-----PALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (756)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D 390 (756)
..... +....+.... .........+........... ........+.++++|+++|+|++|
T Consensus 186 -------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~i~~P~lii~G~~D 250 (302)
T PRK00870 186 -------RDLSD-AVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVA-------ANRAAWAVLERWDKPFLTAFSDSD 250 (302)
T ss_pred -------ccCCH-HHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchH-------HHHHHHHhhhcCCCceEEEecCCC
Confidence 00000 0000000000 000000000000000000000 001112567889999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCeE---EEEEcCCCCcccccchhhHHHHhh
Q 004396 391 NMLPSEDEAKRLNNSLQNCI---VRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 391 ~~vp~~~~~~~l~~~l~~~~---l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
.+++.. .+.+.+.+++++ +.+++++||++++|+|+.+++.|.
T Consensus 251 ~~~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 295 (302)
T PRK00870 251 PITGGG--DAILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVL 295 (302)
T ss_pred CcccCc--hHHHHhhcccccccceeeecCCCccchhhChHHHHHHHH
Confidence 999986 478889899876 889999999999999999999988
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=218.49 Aligned_cols=229 Identities=13% Similarity=0.089 Sum_probs=148.3
Q ss_pred EEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeCh
Q 004396 181 TLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGDSF 251 (756)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~ 251 (756)
.|||+||++.+...|..+++.| +++|+|+++|+||||.| +++++++|+.++++.+... ++++|+||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~---~~~~lvGhSm 81 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPD---HKVILVGHSI 81 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCC---CCEEEEecCc
Confidence 4999999999999999999999 77899999999999987 4788999999999986431 3899999999
Q ss_pred hhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhH-------HHHHhhhcC
Q 004396 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIK-------MAMVNIENR 324 (756)
Q Consensus 252 GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 324 (756)
||.+++.+|.++|++|+++|++++......... .......... ....+...+......+.. .........
T Consensus 82 GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (255)
T PLN02965 82 GGGSVTEALCKFTDKISMAIYVAAAMVKPGSII--SPRLKNVMEG-TEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQ 158 (255)
T ss_pred chHHHHHHHHhCchheeEEEEEccccCCCCCCc--cHHHHhhhhc-cccceeeeeccCCCCCcchhhcCHHHHHHHHhcC
Confidence 999999999999999999999998532111000 0000000000 000000000000000000 000000000
Q ss_pred CChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHH
Q 004396 325 LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (756)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~ 404 (756)
... +...... ........... ... ......+.++++|+++|+|++|..+|++. ++.+.+
T Consensus 159 ~~~-~~~~~~~--------------~~~~~~~~~~~-~~~----~~~~~~~~~i~vP~lvi~g~~D~~~~~~~-~~~~~~ 217 (255)
T PLN02965 159 SPL-EDYTLSS--------------KLLRPAPVRAF-QDL----DKLPPNPEAEKVPRVYIKTAKDNLFDPVR-QDVMVE 217 (255)
T ss_pred CCH-HHHHHHH--------------HhcCCCCCcch-hhh----hhccchhhcCCCCEEEEEcCCCCCCCHHH-HHHHHH
Confidence 000 0000000 00000000000 000 01123456789999999999999999995 999999
Q ss_pred hCCCeEEEEEcCCCCcccccchhhHHHHhhhc
Q 004396 405 SLQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (756)
Q Consensus 405 ~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (756)
.++++++++++++||++++|+|+++++.|.+.
T Consensus 218 ~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~ 249 (255)
T PLN02965 218 NWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQA 249 (255)
T ss_pred hCCcceEEEecCCCCchhhcCHHHHHHHHHHH
Confidence 99999999999999999999999999999865
|
|
| >PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.7e-24 Score=215.44 Aligned_cols=174 Identities=15% Similarity=0.167 Sum_probs=137.3
Q ss_pred CcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCH
Q 004396 485 GKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAA 564 (756)
Q Consensus 485 ~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~ 564 (756)
.++++|.||+|+++|+|+|+||+++ +|.+++...+ .....++++.++|+. |+++++++..|++||+|
T Consensus 52 ~v~v~g~e~~p~~~~~IivaNH~S~-lD~~~l~~~~----~~~~~fvaK~el~~~--------P~~g~~~~~~g~i~VdR 118 (245)
T PRK15018 52 KVECRKPADAESYGNAIYIANHQNN-YDMVTASNIV----QPPTVTVGKKSLLWI--------PFFGQLYWLTGNLLIDR 118 (245)
T ss_pred EEEEEccCCCCCCCCEEEEECCCch-HHHHHHHHHh----CCCcEEEEeHHHhhC--------CHHHHHHHhCCCeEEeC
Confidence 4568899999999999999999987 6987765442 344568999999987 68899999999999998
Q ss_pred Hh----------HHHHhc-CCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhhhhcC
Q 004396 565 RN----------LFKLLS-TKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLD 633 (756)
Q Consensus 565 ~~----------~~~~l~-~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~~~ 633 (756)
++ +.+.++ .|.+|+|||||||+... ++ .++|+|++++|.++|+|||||++.|..+.++.
T Consensus 119 ~~~~~~~~~l~~~~~~l~~~g~sv~IFPEGTRs~~g------~l-~~Fk~Ga~~lA~~~~~PIvPv~i~g~~~~~~~--- 188 (245)
T PRK15018 119 NNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGR------GL-LPFKTGAFHAAIAAGVPIIPVCVSTTSNKINL--- 188 (245)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEECCccCCCCC------CC-CCccHHHHHHHHHcCCCEEEEEEECccccccc---
Confidence 53 234454 47789999999996422 23 38999999999999999999999987665210
Q ss_pred ccccccccchHHHHHHhhcccccccccccccccccccccCccCCCCCceEEEEeCCcccCCCCCCcCCCHHHHHHHHHHH
Q 004396 634 YKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENANELYLHI 713 (756)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~~p~~p~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~v 713 (756)
....|+++++.||+||+++++ ..++.+++.+++
T Consensus 189 ------------------------------------------~~~~~g~i~v~~~~PI~~~~~-----~~~~~~~l~~~v 221 (245)
T PRK15018 189 ------------------------------------------NRLHNGLVIVEMLPPIDVSQY-----GKDQVRELAAHC 221 (245)
T ss_pred ------------------------------------------CCccCeeEEEEEcCCCcCCCC-----ChhhHHHHHHHH
Confidence 001378999999999999875 235578888999
Q ss_pred HHHHHHHHHHHHHHh
Q 004396 714 KSQVERCLDYLLKKR 728 (756)
Q Consensus 714 ~~~v~~~~~~l~~~r 728 (756)
++.|++.++++.++.
T Consensus 222 ~~~i~~~~~~l~~~~ 236 (245)
T PRK15018 222 RSIMEQKIAELDKEV 236 (245)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999998888887665
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.9e-23 Score=217.98 Aligned_cols=242 Identities=14% Similarity=0.147 Sum_probs=152.0
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC--------hhHHHHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--------FEGLVKFV 228 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss--------~~~~a~dv 228 (756)
...+|.. ++|...|+ +|+|||+||++.+...|..+++.|.++|+|+++|+||||.|+ ++++++++
T Consensus 19 ~~~~~~~---i~y~~~G~----~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 91 (286)
T PRK03204 19 FDSSRGR---IHYIDEGT----GPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVI 91 (286)
T ss_pred EEcCCcE---EEEEECCC----CCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHHHHH
Confidence 3345554 46777775 689999999999999999999999888999999999999873 57888999
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhh-ch-hHHHHh-H-Hh
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKA-MP-DELHCA-V-PY 304 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~-~~-~~~~~~-~-~~ 304 (756)
.+++++++.. +++++||||||.+++.+|..+|++++++|++++.... .... ....... .. ...... . ..
T Consensus 92 ~~~~~~~~~~----~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
T PRK03204 92 GEFVDHLGLD----RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWP-ADTL--AMKAFSRVMSSPPVQYAILRRN 164 (286)
T ss_pred HHHHHHhCCC----CEEEEEECccHHHHHHHHHhChhheeEEEEECccccC-CCch--hHHHHHHHhccccchhhhhhhh
Confidence 9999886544 8999999999999999999999999999998875311 0000 0000000 00 000000 0 00
Q ss_pred -HhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHH----HH---HHHHHHHhhhcc
Q 004396 305 -LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLK----LL---KSASAYANSRLH 376 (756)
Q Consensus 305 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~l~ 376 (756)
......... .....+. .....+.. ............ .+ ..........+.
T Consensus 165 ~~~~~~~~~~-------~~~~~~~-~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
T PRK03204 165 FFVERLIPAG-------TEHRPSS-AVMAHYRA--------------VQPNAAARRGVAEMPKQILAARPLLARLAREVP 222 (286)
T ss_pred HHHHHhcccc-------ccCCCCH-HHHHHhcC--------------CCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhh
Confidence 000000000 0000000 00000000 000000000000 00 000011111111
Q ss_pred C--CCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 377 A--VKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 377 ~--i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
. +++|+|+|+|++|.++++....+.+.+.+|++++++++++||++++|+|+++++.|.
T Consensus 223 ~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~ 282 (286)
T PRK03204 223 ATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAII 282 (286)
T ss_pred hhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHH
Confidence 1 389999999999998866533688999999999999999999999999999999997
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=216.99 Aligned_cols=243 Identities=19% Similarity=0.214 Sum_probs=155.9
Q ss_pred eccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCC
Q 004396 169 PVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSP 240 (756)
Q Consensus 169 ~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~ 240 (756)
|...|.+.+++|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++++.+++++++..
T Consensus 3 ~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~-- 80 (257)
T TIGR03611 3 YELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE-- 80 (257)
T ss_pred EEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC--
Confidence 344454444688999999999999999999999988999999999999988 4788999999999986544
Q ss_pred CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHh
Q 004396 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVN 320 (756)
Q Consensus 241 ~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (756)
+++++||||||.+|+.+|.++|+.++++|++++......... ....... .++..............
T Consensus 81 --~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~----~~~~~~~--------~~~~~~~~~~~~~~~~~ 146 (257)
T TIGR03611 81 --RFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTR----RCFDVRI--------ALLQHAGPEAYVHAQAL 146 (257)
T ss_pred --cEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHH----HHHHHHH--------HHHhccCcchhhhhhhh
Confidence 899999999999999999999999999999987543211000 0000000 00000000000000000
Q ss_pred hhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHH
Q 004396 321 IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAK 400 (756)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~ 400 (756)
. ... ..........+.. .....................+... +....+.++++|+++++|++|.++|++. ++
T Consensus 147 ~--~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~ 218 (257)
T TIGR03611 147 F--LYP-ADWISENAARLAA--DEAHALAHFPGKANVLRRINALEAF--DVSARLDRIQHPVLLIANRDDMLVPYTQ-SL 218 (257)
T ss_pred h--hcc-ccHhhccchhhhh--hhhhcccccCccHHHHHHHHHHHcC--CcHHHhcccCccEEEEecCcCcccCHHH-HH
Confidence 0 000 0000000000000 0000000000111111111111111 1225577899999999999999999995 89
Q ss_pred HHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 401 RLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 401 ~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++.+.+++++++.++++||++++++|+++++.|.+
T Consensus 219 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 253 (257)
T TIGR03611 219 RLAAALPNAQLKLLPYGGHASNVTDPETFNRALLD 253 (257)
T ss_pred HHHHhcCCceEEEECCCCCCccccCHHHHHHHHHH
Confidence 99999999999999999999999999999999873
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-23 Score=215.15 Aligned_cols=247 Identities=19% Similarity=0.221 Sum_probs=156.4
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhcc
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHAS 238 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~ 238 (756)
++|.+.|. +++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++++..+
T Consensus 18 ~~~~~~g~--~~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~ 95 (278)
T TIGR03056 18 WHVQDMGP--TAGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGLS 95 (278)
T ss_pred EEEEecCC--CCCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCCC
Confidence 45666665 2468999999999999999999999988999999999999987 4788999999999886543
Q ss_pred CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCC--hhHH
Q 004396 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGD--PIKM 316 (756)
Q Consensus 239 ~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 316 (756)
+++|+||||||.+++.+|.++|++++++|++++.............+........ .............. ....
T Consensus 96 ----~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 170 (278)
T TIGR03056 96 ----PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLAC-NPFTPPMMSRGAADQQRVER 170 (278)
T ss_pred ----CceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhh-cccchHHHHhhcccCcchhH
Confidence 8899999999999999999999999999999885532111100000000000000 00000000000000 0000
Q ss_pred HHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH-HHHHhhhccCCCCcEEEEEeCCCCCCCC
Q 004396 317 AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHAVKAEVLVLASGKDNMLPS 395 (756)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLvI~G~~D~~vp~ 395 (756)
............ .. ....... ............+... .......+.++++|+++|+|++|.++|.
T Consensus 171 ~~~~~~~~~~~~-~~-~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~ 236 (278)
T TIGR03056 171 LIRDTGSLLDKA-GM-TYYGRLI------------RSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPP 236 (278)
T ss_pred Hhhccccccccc-hh-hHHHHhh------------cCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCH
Confidence 000000000000 00 0000000 0000000000111000 0011245788999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 396 EDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 396 ~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+. .+.+.+.+++++++.++++||++++|+|+++++.|.+
T Consensus 237 ~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 275 (278)
T TIGR03056 237 DE-SKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQ 275 (278)
T ss_pred HH-HHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHH
Confidence 84 9999999999999999999999999999999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.1e-23 Score=227.72 Aligned_cols=264 Identities=15% Similarity=0.177 Sum_probs=153.6
Q ss_pred eeeccCCCCC-CCCCEEEEECCCCCchhhHHH-hHhhhc----CCcEEEEeccCCCCCC--------ChhHHHHHHH-HH
Q 004396 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGLGLIL-HHKPLG----KAFEVRCLHIPVYDRT--------PFEGLVKFVE-ET 231 (756)
Q Consensus 167 ~~~~~~G~~~-~~~p~lV~lHG~~~s~~~~~~-~~~~L~----~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~-~~ 231 (756)
+++...|.+. +.+|+|||+||++++...|.. +++.|+ ++|+|+++|+||||.| +++++++++. .+
T Consensus 188 l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~l 267 (481)
T PLN03087 188 LFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSV 267 (481)
T ss_pred EEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHH
Confidence 4555555432 235799999999999999985 446654 6899999999999987 3677888884 77
Q ss_pred HHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhc------hh-HHHHhHHh
Q 004396 232 VRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAM------PD-ELHCAVPY 304 (756)
Q Consensus 232 i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~ 304 (756)
++.++.. +++++||||||.+++.+|.++|++|+++|+++++.................. +. ........
T Consensus 268 l~~lg~~----k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (481)
T PLN03087 268 LERYKVK----SFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVAC 343 (481)
T ss_pred HHHcCCC----CEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHH
Confidence 8875544 8999999999999999999999999999999985432211110000000000 00 00000000
Q ss_pred HhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhh-hhccCChhhHHHHHHHHHH----HHHHHhhhccCCC
Q 004396 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSV-MSDIIPKDTLLWKLKLLKS----ASAYANSRLHAVK 379 (756)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~i~ 379 (756)
++... ....... ........+....+.... .....+.+ ................... ........+.+|+
T Consensus 344 w~~~~-~~~~~~~---~~~~~~~~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~ 418 (481)
T PLN03087 344 WYEHI-SRTICLV---ICKNHRLWEFLTRLLTRN-RMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLK 418 (481)
T ss_pred HHHHH-Hhhhhcc---cccchHHHHHHHHHhhhh-hhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCC
Confidence 00000 0000000 000000000000000000 00000000 0000000000000000000 0111223334789
Q ss_pred CcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccc-cchhhHHHHhhhccccccC
Q 004396 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLL-EEGISLLTIIKGTCKYRRS 442 (756)
Q Consensus 380 ~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~-e~p~~~~~~I~~~~f~rr~ 442 (756)
+|+|+|+|++|.++|++. .+.+.+.+|++++++++++||+.++ |+|+.+++.|. .||+++
T Consensus 419 vPtLII~Ge~D~ivP~~~-~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~--~F~~~~ 479 (481)
T PLN03087 419 CDVAIFHGGDDELIPVEC-SYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELE--EIWRRS 479 (481)
T ss_pred CCEEEEEECCCCCCCHHH-HHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHH--HHhhcc
Confidence 999999999999999995 9999999999999999999999986 99999999998 677664
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.4e-23 Score=213.09 Aligned_cols=231 Identities=13% Similarity=0.105 Sum_probs=151.5
Q ss_pred CCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
.++|+|||+||++++...|..++..|+++|+|+++|+||||.| +++++++|+.++++.+... +++|+|||
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~~~----~~~lvGhS 89 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQIE----KATFIGHS 89 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC----ceEEEEEC
Confidence 4578999999999999999999999998999999999999988 5899999999999986544 79999999
Q ss_pred hhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHH
Q 004396 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (756)
Q Consensus 251 ~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (756)
|||.+|+.+|.++|++|+++|++++........ ........ +............. ..............
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~--~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 158 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR--RHDEIFAA--------INAVSEAGATTRQQ-AAAIMRQHLNEEGV 158 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCCCCccch--hhHHHHHH--------HHHhhhcccccHHH-HHHHHHHhcCCHHH
Confidence 999999999999999999999998643211100 00000000 00000000000000 00000000000000
Q ss_pred HHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeE
Q 004396 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (756)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~ 410 (756)
.......+. ........ ...| ..+.. ......+..+++|+|+|+|++|.+++.+. .+.+.+.+++++
T Consensus 159 ~~~~~~~~~-------~~~~~~~~-~~~~--~~~~~--~~~~~~~~~~~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~~ 225 (255)
T PRK10673 159 IQFLLKSFV-------DGEWRFNV-PVLW--DQYPH--IVGWEKIPAWPHPALFIRGGNSPYVTEAY-RDDLLAQFPQAR 225 (255)
T ss_pred HHHHHhcCC-------cceeEeeH-HHHH--HhHHH--HhCCcccCCCCCCeEEEECCCCCCCCHHH-HHHHHHhCCCcE
Confidence 000000000 00000000 0000 00100 01124567889999999999999999884 999999999999
Q ss_pred EEEEcCCCCcccccchhhHHHHhhh
Q 004396 411 VRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 411 l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+++++++||++++|+|+.+++.|.+
T Consensus 226 ~~~~~~~gH~~~~~~p~~~~~~l~~ 250 (255)
T PRK10673 226 AHVIAGAGHWVHAEKPDAVLRAIRR 250 (255)
T ss_pred EEEeCCCCCeeeccCHHHHHHHHHH
Confidence 9999999999999999999999873
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.1e-23 Score=218.05 Aligned_cols=247 Identities=19% Similarity=0.175 Sum_probs=153.4
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHH---hHhhh-cCCcEEEEeccCCCCCCCh--------hHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLIL---HHKPL-GKAFEVRCLHIPVYDRTPF--------EGL 224 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~---~~~~L-~~gy~Vi~~Dl~G~G~Ss~--------~~~ 224 (756)
++.+|....-++|...|+ +|+|||+||++++...|.. .+..+ +++|+|+++|+||||.|+. ..+
T Consensus 12 ~~~~~~~~~~~~y~~~g~----~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 87 (282)
T TIGR03343 12 INEKGLSNFRIHYNEAGN----GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVN 87 (282)
T ss_pred cccccccceeEEEEecCC----CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchh
Confidence 344554434466777665 6789999999988877754 34455 5689999999999999942 135
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCc-----hhHHhhchhHHH
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL-----FPILKAMPDELH 299 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~-----~~~~~~~~~~~~ 299 (756)
++++.++++.+..+ +++++||||||.+++.+|.++|++++++|++++.... ....... ............
T Consensus 88 ~~~l~~~l~~l~~~----~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T TIGR03343 88 ARAVKGLMDALDIE----KAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLG-PSLFAPMPMEGIKLLFKLYAEPSY 162 (282)
T ss_pred HHHHHHHHHHcCCC----CeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCC-ccccccCchHHHHHHHHHhcCCCH
Confidence 78888998886655 8999999999999999999999999999999975321 1100000 000000000000
Q ss_pred HhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHH---HHHHHHhhhcc
Q 004396 300 CAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK---SASAYANSRLH 376 (756)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~ 376 (756)
......+.....++ ... .....+........ . ............ .........+.
T Consensus 163 ~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~~~~l~ 220 (282)
T TIGR03343 163 ETLKQMLNVFLFDQ---------SLI-TEELLQGRWENIQR-----------Q-PEHLKNFLISSQKAPLSTWDVTARLG 220 (282)
T ss_pred HHHHHHHhhCccCc---------ccC-cHHHHHhHHHHhhc-----------C-HHHHHHHHHhccccccccchHHHHHh
Confidence 00000000000000 000 00000000000000 0 000000000000 00011235678
Q ss_pred CCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 377 AVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 377 ~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++++|+|+++|++|.+++++. ++++.+.+|++++++++++||++++|+|+.+++.|.+
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~-~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~ 278 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDH-GLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVID 278 (282)
T ss_pred hCCCCEEEEEccCCCcCCchh-HHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHH
Confidence 899999999999999999985 9999999999999999999999999999999999973
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.6e-23 Score=209.45 Aligned_cols=231 Identities=17% Similarity=0.237 Sum_probs=145.7
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC------hhHHHHHHHHHHHHhhccCCCCCEEEEEeCh
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASSPEKPIYLVGDSF 251 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss------~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~ 251 (756)
+.|+|||+||++++...|..+++.|+++|+|+++|+||||.|+ ++++++++.+.+ .++++++||||
T Consensus 3 g~~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~--------~~~~~lvG~S~ 74 (245)
T TIGR01738 3 GNVHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQA--------PDPAIWLGWSL 74 (245)
T ss_pred CCceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhC--------CCCeEEEEEcH
Confidence 3478999999999999999999999888999999999999983 455555544332 13899999999
Q ss_pred hhHHHHHHHHhCCCcceEEEEeCCCCcCCcCC-cC-Cch-hHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChH
Q 004396 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQ-LQ-PLF-PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (756)
Q Consensus 252 GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (756)
||.+++.+|.++|+++.++|++++........ +. ... .....+...........+.... ..... ......
T Consensus 75 Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~ 147 (245)
T TIGR01738 75 GGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFL------ALQTL-GTPTAR 147 (245)
T ss_pred HHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHH------HHHHh-cCCccc
Confidence 99999999999999999999998865432211 11 000 0011000000000000000000 00000 000000
Q ss_pred HHHHHHHhhhhhhhhhhhhhhccCC-hhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC
Q 004396 329 IKLEQLSNNLPALLPRLSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (756)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~ 407 (756)
.....+...+.. ...+ ...+......+.. ......+.++++|+++++|++|.+++.+. .+.+.+.++
T Consensus 148 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~Pvlii~g~~D~~~~~~~-~~~~~~~~~ 215 (245)
T TIGR01738 148 QDARALKQTLLA---------RPTPNVQVLQAGLEILAT--VDLRQPLQNISVPFLRLYGYLDGLVPAKV-VPYLDKLAP 215 (245)
T ss_pred hHHHHHHHHhhc---------cCCCCHHHHHHHHHHhhc--ccHHHHHhcCCCCEEEEeecCCcccCHHH-HHHHHHhCC
Confidence 000111110000 0000 0111111111111 11235678999999999999999999985 888999999
Q ss_pred CeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 408 NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 408 ~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++++++++++||++++|+|+++++.|.+
T Consensus 216 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 243 (245)
T TIGR01738 216 HSELYIFAKAAHAPFLSHAEAFCALLVA 243 (245)
T ss_pred CCeEEEeCCCCCCccccCHHHHHHHHHh
Confidence 9999999999999999999999999984
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924 | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-24 Score=213.25 Aligned_cols=170 Identities=20% Similarity=0.220 Sum_probs=121.6
Q ss_pred cCcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccC
Q 004396 484 DGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVA 563 (756)
Q Consensus 484 ~~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~ 563 (756)
+.++++|.||||++||+|+|+||++..+|++++...+.. .+..++++++..+|.. |+++.+ .++++
T Consensus 8 ~~v~v~G~e~lp~~g~~iiv~NH~s~~~D~~~l~~~~~~-~~~~~~~lak~~l~~~--------p~l~~~-----~i~v~ 73 (210)
T cd07986 8 LEVDVSGLENIPKDGPVVIVANHPFGILDGLILADLLGS-VRPDVRILANQLLSKI--------PELRDL-----FIPVD 73 (210)
T ss_pred EEEecCchhcCCCCCCEEEEEcCCccchHHHHHHHHHHH-hCCCeEEEeHHhhhhC--------cchHhh-----EEecc
Confidence 467899999999999999999998544798877665433 3457899999999976 345444 46665
Q ss_pred HH--------------hHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhh
Q 004396 564 AR--------------NLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIAD 629 (756)
Q Consensus 564 ~~--------------~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~ 629 (756)
+. ++.++|++|++|+|||||+|+..+...++..+. ++|+|+++||.++|+|||||++.|.++.+.
T Consensus 74 r~~~~~~~~~~~~~~~~~~~~L~~G~~l~IFPEGtrs~~~~~~g~~~~~-~fk~G~~~lA~~~~~pIvPv~i~g~~~~~~ 152 (210)
T cd07986 74 PLEGRAALAKNRESLREALRHLKNGGALIIFPAGRVSTASPPFGRVSDR-PWNPFVARLARKAKAPVVPVYFSGRNSRLF 152 (210)
T ss_pred CCCCcchhhhhHHHHHHHHHHHhCCCEEEEECCcccccccccCCccccC-CccHHHHHHHHHHCCCEEEEEEeeeCcHHH
Confidence 42 577899999999999999998655432333333 889999999999999999999999987643
Q ss_pred hhcCccccccccchHHHHHHhhcccccccccccccccccccccC-ccCCCCCceEEEEeCCcccCCCC
Q 004396 630 LVLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFP-GLLPKVPGRFYYLFGKPIQTKGR 696 (756)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p-g~~p~~p~~~~~~~G~PI~~~~~ 696 (756)
...+.- . +.++ ...+| +.+.+.++++.+.||+||++.++
T Consensus 153 ~~~~~~-----------~-------~~~~----------~~~~~~~~~~~~~~~v~v~~g~pI~~~~~ 192 (210)
T cd07986 153 YLAGLI-----------H-------PTLR----------TLLLPRELLNKRGKTIRIRVGRPIPPEEL 192 (210)
T ss_pred HHHHcc-----------C-------HHHH----------HHHHHHHHHHhCCCEEEEEeCCcCCHHHH
Confidence 221100 0 0000 01122 22223478999999999999865
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins. |
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=208.08 Aligned_cols=238 Identities=20% Similarity=0.185 Sum_probs=155.6
Q ss_pred eeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCC
Q 004396 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSP 240 (756)
Q Consensus 168 ~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~ 240 (756)
+|...|+ .+++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++.+..+
T Consensus 3 ~~~~~g~-~~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~-- 79 (251)
T TIGR02427 3 HYRLDGA-ADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIE-- 79 (251)
T ss_pred eEEeecC-CCCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC--
Confidence 3444454 23578999999999999999999999988999999999999988 5788999999999986543
Q ss_pred CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhch-hHHHHhHHhHhhhhcCChhHHHHH
Q 004396 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP-DELHCAVPYLLSYVMGDPIKMAMV 319 (756)
Q Consensus 241 ~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 319 (756)
+++++||||||.+++.+|.++|+.++++|++++........ ........+. ..........+.......
T Consensus 80 --~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 149 (251)
T TIGR02427 80 --RAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPE--SWNARIAAVRAEGLAALADAVLERWFTPG------ 149 (251)
T ss_pred --ceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchh--hHHHHHhhhhhccHHHHHHHHHHHHcccc------
Confidence 89999999999999999999999999999998754321110 0000000000 000000000000000000
Q ss_pred hhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHH
Q 004396 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA 399 (756)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~ 399 (756)
.........+.+.+.+. ..+...+......+. .......+.++++|+++++|++|.+++.+. .
T Consensus 150 ---~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~-~ 212 (251)
T TIGR02427 150 ---FREAHPARLDLYRNMLV-----------RQPPDGYAGCCAAIR--DADFRDRLGAIAVPTLCIAGDQDGSTPPEL-V 212 (251)
T ss_pred ---cccCChHHHHHHHHHHH-----------hcCHHHHHHHHHHHh--cccHHHHhhhcCCCeEEEEeccCCcCChHH-H
Confidence 00000000001110000 000011111111111 111235567899999999999999999995 8
Q ss_pred HHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 400 KRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 400 ~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+.+.+.+++.++++++++||++++|+|+.+++.+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 248 (251)
T TIGR02427 213 REIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRD 248 (251)
T ss_pred HHHHHhCCCceEEEECCCCCcccccChHHHHHHHHH
Confidence 889999999999999999999999999999998873
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=219.55 Aligned_cols=241 Identities=17% Similarity=0.157 Sum_probs=153.0
Q ss_pred eeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----------ChhHHHHHHHHHHHHhh
Q 004396 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVEETVRREH 236 (756)
Q Consensus 168 ~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----------s~~~~a~dv~~~i~~l~ 236 (756)
+|.+.|. .++|+|||+||++++...|+.+++.|+++|+|+++|+||||.| +++++++++.++++++.
T Consensus 118 ~y~~~G~--~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~ 195 (383)
T PLN03084 118 FCVESGS--NNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK 195 (383)
T ss_pred EEEecCC--CCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC
Confidence 5666775 2468999999999999999999999988999999999999976 46788999999999976
Q ss_pred ccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHH
Q 004396 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM 316 (756)
Q Consensus 237 ~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (756)
.. +++|+|||+||.+++.+|.++|++++++|+++|+.......... .+..+.... ...++. ..+...
T Consensus 196 ~~----~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~---~l~~~~~~l---~~~~~~---~~~~~~ 262 (383)
T PLN03084 196 SD----KVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPS---TLSEFSNFL---LGEIFS---QDPLRA 262 (383)
T ss_pred CC----CceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchH---HHHHHHHHH---hhhhhh---cchHHH
Confidence 65 89999999999999999999999999999999865321111110 010000000 000000 000000
Q ss_pred HHHhhhc----CCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH----HHHHHhhhc--cCCCCcEEEEE
Q 004396 317 AMVNIEN----RLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS----ASAYANSRL--HAVKAEVLVLA 386 (756)
Q Consensus 317 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l--~~i~~PvLvI~ 386 (756)
....... .... +....+...+.. .......+......+.. ........+ .++++|+|+|+
T Consensus 263 ~~~~~~~~~~~~~~~-e~~~~~~~~~~~---------~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~ 332 (383)
T PLN03084 263 SDKALTSCGPYAMKE-DDAMVYRRPYLT---------SGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCW 332 (383)
T ss_pred HhhhhcccCccCCCH-HHHHHHhccccC---------CcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEe
Confidence 0000000 0000 000000000000 00000000000111110 000011111 46899999999
Q ss_pred eCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 387 G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|++|.+++.+. .+.+.+. +++++++++++||++++|+|+++++.|.+
T Consensus 333 G~~D~~v~~~~-~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~ 379 (383)
T PLN03084 333 GLRDRWLNYDG-VEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISG 379 (383)
T ss_pred eCCCCCcCHHH-HHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHH
Confidence 99999999984 8888776 58999999999999999999999999983
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-22 Score=218.31 Aligned_cols=252 Identities=17% Similarity=0.190 Sum_probs=154.6
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhh-HHHhHhhhc-CCcEEEEeccCCCCCC--------ChhHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLG-LILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGLV 225 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~-~~~~~~~L~-~gy~Vi~~Dl~G~G~S--------s~~~~a 225 (756)
+...+|..+.+....+.+. +.+++|||+||++++... |..+++.|+ .+|+|+++|+||||.| ++++++
T Consensus 66 ~~~~~g~~l~~~~~~p~~~--~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 143 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENS--RPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLV 143 (349)
T ss_pred EEcCCCCEEEEEEEecCCC--CCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHH
Confidence 3445666543333222211 246899999999988764 678888895 5899999999999988 478889
Q ss_pred HHHHHHHHHhhcc--CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHH
Q 004396 226 KFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303 (756)
Q Consensus 226 ~dv~~~i~~l~~~--~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (756)
+|+.++++.+... .+..+++|+||||||.+++.+|.++|+.++++||++|+........... ....+........+
T Consensus 144 ~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~--~~~~~~~~~~~~~p 221 (349)
T PLN02385 144 DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPP--LVLQILILLANLLP 221 (349)
T ss_pred HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCch--HHHHHHHHHHHHCC
Confidence 9999998887643 2345799999999999999999999999999999998664322111100 00000000000000
Q ss_pred hHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEE
Q 004396 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVL 383 (756)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 383 (756)
.. ......... .............. .. . ........+......+.. .......+.++++|+|
T Consensus 222 ~~-~~~~~~~~~-------~~~~~~~~~~~~~~-~~-------~-~~~~~~~~~~~~~~~l~~-~~~~~~~l~~i~~P~L 283 (349)
T PLN02385 222 KA-KLVPQKDLA-------ELAFRDLKKRKMAE-YN-------V-IAYKDKPRLRTAVELLRT-TQEIEMQLEEVSLPLL 283 (349)
T ss_pred Cc-eecCCCccc-------cccccCHHHHHHhh-cC-------c-ceeCCCcchHHHHHHHHH-HHHHHHhcccCCCCEE
Confidence 00 000000000 00000000000000 00 0 000001112222222222 1233467889999999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhC--CCeEEEEEcCCCCcccccchhhHH
Q 004396 384 VLASGKDNMLPSEDEAKRLNNSL--QNCIVRNFKDNGHTLLLEEGISLL 430 (756)
Q Consensus 384 vI~G~~D~~vp~~~~~~~l~~~l--~~~~l~~i~~aGH~~~~e~p~~~~ 430 (756)
+|+|++|.+++++. ++.+.+.+ +++++++++++||.+++|+|+++.
T Consensus 284 ii~G~~D~vv~~~~-~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~ 331 (349)
T PLN02385 284 ILHGEADKVTDPSV-SKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMI 331 (349)
T ss_pred EEEeCCCCccChHH-HHHHHHHcCCCCceEEEeCCCeeecccCCChhhH
Confidence 99999999999995 88888887 568999999999999999998733
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-22 Score=211.08 Aligned_cols=248 Identities=14% Similarity=0.116 Sum_probs=151.6
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKF 227 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~d 227 (756)
...||..+....+.+... ..+.|+++||++++...|..+++.| ..+|+|+++|+||||.| ++.++++|
T Consensus 6 ~~~~g~~l~~~~~~~~~~---~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d 82 (276)
T PHA02857 6 FNLDNDYIYCKYWKPITY---PKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRD 82 (276)
T ss_pred ecCCCCEEEEEeccCCCC---CCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHH
Confidence 445666533323333212 2567777799999999999999999 55899999999999988 24556677
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHh-
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL- 306 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 306 (756)
+.+.++.+....+..+++|+||||||.+|+.+|.++|+.++++|+++|..... . .... .. ........+
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~--~-~~~~---~~----~~~~~~~~~~ 152 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAE--A-VPRL---NL----LAAKLMGIFY 152 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccc--c-ccHH---HH----HHHHHHHHhC
Confidence 77777665544555689999999999999999999999999999999865311 1 0000 00 000000000
Q ss_pred hhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEE
Q 004396 307 SYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLA 386 (756)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~ 386 (756)
......... .. .... . .......... +. . ........+..... .......+.+.++++|+|+|+
T Consensus 153 ~~~~~~~~~--~~----~~~~-~-~~~~~~~~~~--~~----~-~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvliv~ 216 (276)
T PHA02857 153 PNKIVGKLC--PE----SVSR-D-MDEVYKYQYD--PL----V-NHEKIKAGFASQVL-KATNKVRKIIPKIKTPILILQ 216 (276)
T ss_pred CCCccCCCC--Hh----hccC-C-HHHHHHHhcC--CC----c-cCCCccHHHHHHHH-HHHHHHHHhcccCCCCEEEEe
Confidence 000000000 00 0000 0 0000000000 00 0 00001111111111 112223467889999999999
Q ss_pred eCCCCCCCCHHHHHHHHHhC-CCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 387 SGKDNMLPSEDEAKRLNNSL-QNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 387 G~~D~~vp~~~~~~~l~~~l-~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
|++|.++|++. ++++.+.+ +++++++++++||.++.|+++.-.+++.
T Consensus 217 G~~D~i~~~~~-~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~ 264 (276)
T PHA02857 217 GTNNEISDVSG-AYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMK 264 (276)
T ss_pred cCCCCcCChHH-HHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHH
Confidence 99999999995 98988876 4789999999999999998854444444
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=205.74 Aligned_cols=261 Identities=18% Similarity=0.167 Sum_probs=154.5
Q ss_pred CCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC-----------hhHHHHHHH
Q 004396 161 GGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-----------FEGLVKFVE 229 (756)
Q Consensus 161 g~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss-----------~~~~a~dv~ 229 (756)
+..-.|..-....+ ++++++||+||+|++...|....+.|++.++|+++|++|+|+|+ ...+++-++
T Consensus 74 ~~~~iw~~~~~~~~--~~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE 151 (365)
T KOG4409|consen 74 NGIEIWTITVSNES--ANKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIE 151 (365)
T ss_pred CCceeEEEeecccc--cCCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHH
Confidence 33444544333333 46889999999999999999999999999999999999999993 445666666
Q ss_pred HHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhh
Q 004396 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYV 309 (756)
Q Consensus 230 ~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (756)
++-...++. +.+|+||||||++|..||.+||++|+.|||++|+.-..+..... -...-+..+...+..+ ..
T Consensus 152 ~WR~~~~L~----KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~---~~~~~~~~w~~~~~~~--~~ 222 (365)
T KOG4409|consen 152 QWRKKMGLE----KMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEP---EFTKPPPEWYKALFLV--AT 222 (365)
T ss_pred HHHHHcCCc----ceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcch---hhcCCChHHHhhhhhh--hh
Confidence 666665555 99999999999999999999999999999999987433220000 0000000000000000 00
Q ss_pred cCChhHHHHHhhhcCCChH---HHHHHHHhhhhh------hhhhhhhhh--ccCChhhHHHHHHHHHHHHHHHhhhccCC
Q 004396 310 MGDPIKMAMVNIENRLPPR---IKLEQLSNNLPA------LLPRLSVMS--DIIPKDTLLWKLKLLKSASAYANSRLHAV 378 (756)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 378 (756)
..+|+...... ....+. .+...+...+.. ...+..... .......+.........+...+.+++..+
T Consensus 223 ~~nPl~~LR~~--Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l 300 (365)
T KOG4409|consen 223 NFNPLALLRLM--GPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLREL 300 (365)
T ss_pred cCCHHHHHHhc--cccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhh
Confidence 01111110000 000000 000000000000 000000000 00111112211111112222234556666
Q ss_pred C--CcEEEEEeCCCCCCCCHHHHHHHHHh--CCCeEEEEEcCCCCcccccchhhHHHHhhhc
Q 004396 379 K--AEVLVLASGKDNMLPSEDEAKRLNNS--LQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (756)
Q Consensus 379 ~--~PvLvI~G~~D~~vp~~~~~~~l~~~--l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (756)
+ +|+++|+|++|.+.... ..++.+. ...++.++++++||.+.+|+|+.|++.|.+.
T Consensus 301 ~~~~pv~fiyG~~dWmD~~~--g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~ 360 (365)
T KOG4409|consen 301 KKDVPVTFIYGDRDWMDKNA--GLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEE 360 (365)
T ss_pred ccCCCEEEEecCcccccchh--HHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHH
Confidence 6 99999999999887765 5555553 3468999999999999999999999999854
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.1e-22 Score=214.61 Aligned_cols=262 Identities=14% Similarity=0.131 Sum_probs=158.4
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------------C
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------------P 220 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------------s 220 (756)
.+...||.. ++|...+.+ +++++||++||++++...|..++..| +++|+|+++|+||||.| +
T Consensus 34 ~~~~~~g~~---l~~~~~~~~-~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 109 (330)
T PRK10749 34 EFTGVDDIP---IRFVRFRAP-HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVER 109 (330)
T ss_pred EEEcCCCCE---EEEEEccCC-CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcccc
Confidence 445667765 355444431 24678999999999998999998877 78999999999999987 3
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHH
Q 004396 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHC 300 (756)
Q Consensus 221 ~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (756)
++++++|+.++++.+....+..+++++||||||.+++.+|.++|+.++++|+++|+....... ... ....+.....
T Consensus 110 ~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-~~~--~~~~~~~~~~- 185 (330)
T PRK10749 110 FNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PSW--MARRILNWAE- 185 (330)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC-CcH--HHHHHHHHHH-
Confidence 678899999999887544455689999999999999999999999999999999875432111 110 0000000000
Q ss_pred hHHhH---hhhhcCChhHHHHHhhhcCCC-hHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhcc
Q 004396 301 AVPYL---LSYVMGDPIKMAMVNIENRLP-PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH 376 (756)
Q Consensus 301 ~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 376 (756)
..+.. +........... ...+... ..+......+.+.. .... ........+....+.. .......+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~ 256 (330)
T PRK10749 186 GHPRIRDGYAIGTGRWRPLP--FAINVLTHSRERYRRNLRFYAD----DPEL--RVGGPTYHWVRESILA-GEQVLAGAG 256 (330)
T ss_pred HhcCCCCcCCCCCCCCCCCC--cCCCCCCCCHHHHHHHHHHHHh----CCCc--ccCCCcHHHHHHHHHH-HHHHHhhcc
Confidence 00000 000000000000 0000000 00001111110000 0000 0001122222222211 112336678
Q ss_pred CCCCcEEEEEeCCCCCCCCHHHHHHHHHhC-------CCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 377 AVKAEVLVLASGKDNMLPSEDEAKRLNNSL-------QNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 377 ~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l-------~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
++++|+|+|+|++|.+++++. ++.+.+.+ +++++++++|+||.++.|.++...+++.
T Consensus 257 ~i~~P~Lii~G~~D~vv~~~~-~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~ 320 (330)
T PRK10749 257 DITTPLLLLQAEEERVVDNRM-HDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALN 320 (330)
T ss_pred CCCCCEEEEEeCCCeeeCHHH-HHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHH
Confidence 899999999999999999994 88888765 3568999999999999998854443433
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=207.87 Aligned_cols=252 Identities=16% Similarity=0.124 Sum_probs=163.7
Q ss_pred eeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC---------ChhHHHHHHHHHHHH
Q 004396 165 RWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRR 234 (756)
Q Consensus 165 ~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S---------s~~~~a~dv~~~i~~ 234 (756)
.++++.+.|. .++|.|+++||++.+..+|+.++..| +.+|+|+++|+||+|.| ++..++.|+..++++
T Consensus 32 I~~h~~e~g~--~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~ 109 (322)
T KOG4178|consen 32 IRLHYVEGGP--GDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDH 109 (322)
T ss_pred EEEEEEeecC--CCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHH
Confidence 4567777776 47999999999999999999999999 55699999999999999 588999999999999
Q ss_pred hhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHh---HHhHhhh-hc
Q 004396 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCA---VPYLLSY-VM 310 (756)
Q Consensus 235 l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~ 310 (756)
++.+ +++++||+||+.+|..+|..+|++|+++|+++......... ........+.+..+.. .+..... +.
T Consensus 110 Lg~~----k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~--~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s 183 (322)
T KOG4178|consen 110 LGLK----KAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLK--PLDSSKAIFGKSYYICLFQEPGKPETELS 183 (322)
T ss_pred hccc----eeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccc--hhhhhccccCccceeEeccccCcchhhhc
Confidence 8855 99999999999999999999999999999999866511110 0000000000000000 0000000 00
Q ss_pred CChhHHHHHhhh-cCC-------------ChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHH---hh
Q 004396 311 GDPIKMAMVNIE-NRL-------------PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA---NS 373 (756)
Q Consensus 311 ~~~~~~~~~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 373 (756)
.+...+....+. ... +.+.+.+++. ........+.+...++.++...... ..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~-----------~~~~~f~~~g~~gplNyyrn~~r~w~a~~~ 252 (322)
T KOG4178|consen 184 KDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIA-----------FYVSKFQIDGFTGPLNYYRNFRRNWEAAPW 252 (322)
T ss_pred cchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHH-----------HHHhccccccccccchhhHHHhhCchhccc
Confidence 000000000000 000 0000011100 0001111222333333333333322 35
Q ss_pred hccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCe-EEEEEcCCCCcccccchhhHHHHhhh
Q 004396 374 RLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC-IVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 374 ~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~-~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.+.++++|+++|+|+.|.+.+.....+.+.+..|+. +.++++++||++++|+|+++++.|.+
T Consensus 253 ~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~ 315 (322)
T KOG4178|consen 253 ALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILG 315 (322)
T ss_pred cccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHH
Confidence 678899999999999999998874366677777866 88899999999999999999999984
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-22 Score=206.50 Aligned_cols=222 Identities=16% Similarity=0.183 Sum_probs=138.6
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChh
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~G 252 (756)
+|+|||+||++++...|..+++.|+ +|+|+++|+||||.| +++++++++.++++++... +++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~~----~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNIL----PYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCCC----CeEEEEECHH
Confidence 6789999999999999999999995 699999999999998 6889999999999986544 8999999999
Q ss_pred hHHHHHHHHhCCCc-ceEEEEeCCCCcCCcCCcCCchhHHhhch-hHHHHh-----HHhHhhhhcCChhHHHHHhhhcCC
Q 004396 253 GCLALAVAARNPTI-DLILILSNPATSFGRSQLQPLFPILKAMP-DELHCA-----VPYLLSYVMGDPIKMAMVNIENRL 325 (756)
Q Consensus 253 G~vAl~~A~~~P~~-v~~lVLi~p~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 325 (756)
|.+|+.+|.++|+. ++++|++++......... ....... ..+... ....+..+...+ .....
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 145 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEE----RQARWQNDRQWAQRFRQEPLEQVLADWYQQP-------VFASL 145 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCCCCCCHHH----HHHHHhhhHHHHHHhccCcHHHHHHHHHhcc-------hhhcc
Confidence 99999999999764 999999887543221100 0000000 000000 000000000000 00000
Q ss_pred ChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHH-HHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHH
Q 004396 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-SASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (756)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~ 404 (756)
.... ...+..... . .............. ....+..+.+.++++|+++|+|++|..+. .+.+
T Consensus 146 ~~~~-~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~------~~~~ 207 (242)
T PRK11126 146 NAEQ-RQQLVAKRS----------N-NNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ------ALAQ 207 (242)
T ss_pred CccH-HHHHHHhcc----------c-CCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH------HHHH
Confidence 0000 000000000 0 00000000000000 00112235678999999999999998552 1222
Q ss_pred hCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 405 SLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 405 ~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
. .++++++++++||++++|+|+++++.|.+
T Consensus 208 ~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 237 (242)
T PRK11126 208 Q-LALPLHVIPNAGHNAHRENPAAFAASLAQ 237 (242)
T ss_pred H-hcCeEEEeCCCCCchhhhChHHHHHHHHH
Confidence 2 38999999999999999999999999973
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=214.97 Aligned_cols=250 Identities=14% Similarity=0.152 Sum_probs=145.7
Q ss_pred eeeccCCCCC-----CCCCEEEEECCCCCchhhHH--HhHhhh--------cCCcEEEEeccCCCCCCC-----------
Q 004396 167 FCPVDCGRPL-----KGSPTLLFLPGIDGLGLGLI--LHHKPL--------GKAFEVRCLHIPVYDRTP----------- 220 (756)
Q Consensus 167 ~~~~~~G~~~-----~~~p~lV~lHG~~~s~~~~~--~~~~~L--------~~gy~Vi~~Dl~G~G~Ss----------- 220 (756)
++|.+.|++. +.+|+|||+||++++...|. .+.+.| +++|+|+++|+||||.|+
T Consensus 52 i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~ 131 (360)
T PRK06489 52 LHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFP 131 (360)
T ss_pred EEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCC
Confidence 5666667521 11689999999999988875 343333 678999999999999883
Q ss_pred ---hhHHHHHHHHHH-HHhhccCCCCCEE-EEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhch
Q 004396 221 ---FEGLVKFVEETV-RREHASSPEKPIY-LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP 295 (756)
Q Consensus 221 ---~~~~a~dv~~~i-~~l~~~~~~~~v~-LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~ 295 (756)
++++++++..++ ++++.. +++ ++||||||.+|+.+|.++|++|+++|++++....... .... ......
T Consensus 132 ~~~~~~~a~~~~~~l~~~lgi~----~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~-~~~~--~~~~~~ 204 (360)
T PRK06489 132 RYDYDDMVEAQYRLVTEGLGVK----HLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSG-RNWM--WRRMLI 204 (360)
T ss_pred cccHHHHHHHHHHHHHHhcCCC----ceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccH-HHHH--HHHHHH
Confidence 456777776654 655544 664 8999999999999999999999999999875421110 0000 000000
Q ss_pred hHHHHhHHhHhhhhc-CChhHHHH----H---------hhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHH
Q 004396 296 DELHCAVPYLLSYVM-GDPIKMAM----V---------NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKL 361 (756)
Q Consensus 296 ~~~~~~~~~~~~~~~-~~~~~~~~----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (756)
..... ...+..... ..+..+.. . .................... .. ........+....
T Consensus 205 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~ 276 (360)
T PRK06489 205 ESIRN-DPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERL------AA-PVTADANDFLYQW 276 (360)
T ss_pred HHHHh-CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHH------Hh-hhhcCHHHHHHHH
Confidence 00000 000000000 00000000 0 00000000000000100000 00 0000111111111
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHH--HHHHHhCCCeEEEEEcCC----CCcccccchhhHHHHhhh
Q 004396 362 KLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA--KRLNNSLQNCIVRNFKDN----GHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 362 ~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~--~~l~~~l~~~~l~~i~~a----GH~~~~e~p~~~~~~I~~ 435 (756)
.... ..+..+.+.+|++|+|+|+|++|.++|++. + +.+.+.+|++++++++++ ||.++ |+|+.+++.|.+
T Consensus 277 ~~~~--~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~-~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~ 352 (360)
T PRK06489 277 DSSR--DYNPSPDLEKIKAPVLAINSADDERNPPET-GVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAE 352 (360)
T ss_pred HHhh--ccChHHHHHhCCCCEEEEecCCCcccChhh-HHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHH
Confidence 1111 111246788999999999999999999884 4 789999999999999996 99997 899999999983
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=211.41 Aligned_cols=265 Identities=16% Similarity=0.147 Sum_probs=159.0
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchh-hHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGL 224 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~ 224 (756)
.+...||..+.+..+.+.+. .+..++|||+||++.+.. .|..+...| .++|+|+++|+||||.| +++++
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~-~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~ 114 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSS-SPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLV 114 (330)
T ss_pred eEEcCCCCEEEEEEEecCCC-CCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHH
Confidence 45556777643333322221 123578999999986643 456667778 46899999999999988 36778
Q ss_pred HHHHHHHHHHhhcc--CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhH
Q 004396 225 VKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAV 302 (756)
Q Consensus 225 a~dv~~~i~~l~~~--~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (756)
++|+.++++.+... ....+++|+||||||.+++.++.++|+.++++|+++|........... .... ..... .
T Consensus 115 ~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~-~~~~~----~ 188 (330)
T PLN02298 115 VEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPP-WPIP-QILTF----V 188 (330)
T ss_pred HHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCc-hHHH-HHHHH----H
Confidence 99999999988653 234579999999999999999999999999999999866432211000 0000 00000 0
Q ss_pred HhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcE
Q 004396 303 PYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEV 382 (756)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 382 (756)
..++......+.. ......... .....+.. .. +. .........+....+ .........+.++++|+
T Consensus 189 ~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~-~~---~~-----~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pv 254 (330)
T PLN02298 189 ARFLPTLAIVPTA---DLLEKSVKV-PAKKIIAK-RN---PM-----RYNGKPRLGTVVELL-RVTDYLGKKLKDVSIPF 254 (330)
T ss_pred HHHCCCCccccCC---CcccccccC-HHHHHHHH-hC---cc-----ccCCCccHHHHHHHH-HHHHHHHHhhhhcCCCE
Confidence 0000000000000 000000000 00000000 00 00 000001111111222 11222346788999999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhCC--CeEEEEEcCCCCcccccchhhHHHHhhhc--ccccc
Q 004396 383 LVLASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIKGT--CKYRR 441 (756)
Q Consensus 383 LvI~G~~D~~vp~~~~~~~l~~~l~--~~~l~~i~~aGH~~~~e~p~~~~~~I~~~--~f~rr 441 (756)
|+|+|++|.++|++. ++++.+.++ ++++++++++||.+++++|+...+.+.+. .|+.+
T Consensus 255 Lii~G~~D~ivp~~~-~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 255 IVLHGSADVVTDPDV-SRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred EEEecCCCCCCCHHH-HHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999995 898888774 78999999999999999998765554433 55544
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-22 Score=216.94 Aligned_cols=247 Identities=23% Similarity=0.312 Sum_probs=149.2
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCC--cEEEEeccCCCCCC---------ChhHHHHHHHHHHHHhhccCCCCCEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKA--FEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEKPIYL 246 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~g--y~Vi~~Dl~G~G~S---------s~~~~a~dv~~~i~~l~~~~~~~~v~L 246 (756)
++|+||++|||+++..+|..++..|.+. +.|+++|++|||.+ +..++++.+..+...... .++++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~----~~~~l 132 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFV----EPVSL 132 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcC----cceEE
Confidence 5889999999999999999999999665 99999999999954 366677777777766444 48999
Q ss_pred EEeChhhHHHHHHHHhCCCcceEEE---EeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhc
Q 004396 247 VGDSFGGCLALAVAARNPTIDLILI---LSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIEN 323 (756)
Q Consensus 247 vGhS~GG~vAl~~A~~~P~~v~~lV---Li~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (756)
+|||+||.+|+.+|+.+|+.|+++| ++++...........................+.. ...+..........
T Consensus 133 vghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~~~~~~~~~ 208 (326)
T KOG1454|consen 133 VGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLS----LTEPVRLVSEGLLR 208 (326)
T ss_pred EEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccc----cccchhheeHhhhc
Confidence 9999999999999999999999999 5555442222211111111111111110000000 00000000000000
Q ss_pred C-----CChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCC-CcEEEEEeCCCCCCCCHH
Q 004396 324 R-----LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVK-AEVLVLASGKDNMLPSED 397 (756)
Q Consensus 324 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~PvLvI~G~~D~~vp~~~ 397 (756)
. .......+....-+.. .. ......+.................+.+.++. ||+|+++|++|+++|.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~- 281 (326)
T KOG1454|consen 209 CLKVVYTDPSRLLEKLLHLLSR---PV---KEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLE- 281 (326)
T ss_pred ceeeeccccccchhhhhhheec---cc---ccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHH-
Confidence 0 0000000000000000 00 0000000000000000000111224556676 99999999999999999
Q ss_pred HHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 398 EAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 398 ~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
.++.+.+.+|++++++++++||.+|+|.|+++++.|. .|+++
T Consensus 282 ~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~--~Fi~~ 323 (326)
T KOG1454|consen 282 LAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLR--SFIAR 323 (326)
T ss_pred HHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHH--HHHHH
Confidence 5999999999999999999999999999999999998 55544
|
|
| >PTZ00261 acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.4e-22 Score=205.90 Aligned_cols=175 Identities=10% Similarity=0.111 Sum_probs=130.3
Q ss_pred ccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCHHh----
Q 004396 491 LAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARN---- 566 (756)
Q Consensus 491 ~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~~~---- 566 (756)
.||||+ +|+|+++||+++ +|.+++...+....-+..+++++.++|+. |+++++++..|++||+|++
T Consensus 123 ~EnIP~-~~~IivsNHqS~-lDi~vl~~~~p~r~~~~~~fVAKkELfki--------P~fG~~l~~~G~IPVdR~~~~~g 192 (355)
T PTZ00261 123 WDDISR-HGCAYVGNHTSF-WDVYAFIGLTPFRHLLNTRTLMKSSLRKI--------PIFGGVFDRVGHFPVHFKSDSDG 192 (355)
T ss_pred cccCCC-CCEEEEECCCch-HHHHHHHHHcccccccccEEEEHHHHhhc--------cHHHHHHHHCCCeeeeccccccc
Confidence 589996 599999999988 79988888764332235688999999987 6899999999999998621
Q ss_pred ---------------HHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhhhh
Q 004396 567 ---------------LFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLV 631 (756)
Q Consensus 567 ---------------~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~ 631 (756)
+.+.|++|.+|+|||||||+... + .+. ++|+|++++|.++|+||||+++.|.++.++.
T Consensus 193 ~~~vdrea~~~v~~~~~e~Lk~G~sLvIFPEGTRS~~g---g--~L~-pFK~GaF~LAieagvPIVPvai~Gs~~~wP~- 265 (355)
T PTZ00261 193 NFEVDKEKQAQVQQAIDAHLRLGGSLAFFPEGAINKHP---Q--VLQ-TFRYGTFATIIKHRMEVYYMVSVGSEKTWPW- 265 (355)
T ss_pred ccccchHHHHHHHHHHHHHHHCCCEEEEECCcCCcCCC---C--cCC-CCcHHHHHHHHHcCCCEEEEEEeChhhcCCC-
Confidence 23578999999999999995321 1 233 9999999999999999999999998776311
Q ss_pred cCccccccccchHHHHHHhhcccccccccccccccccccccCc-cCCCCCceEEEEeCC-cccCCCCCCcCCCHHHHHHH
Q 004396 632 LDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPG-LLPKVPGRFYYLFGK-PIQTKGREVSLKDKENANEL 709 (756)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg-~~p~~p~~~~~~~G~-PI~~~~~~~~~~~~~~~~~l 709 (756)
+ ..++.|+++++.||+ ||+++++.. ....+.++++
T Consensus 266 ------------------------------------------g~~l~~~pg~I~V~iG~~PI~~~~~~~-~eL~~~lr~l 302 (355)
T PTZ00261 266 ------------------------------------------WMMIGGLPADMHIRIGAYPIDYDRDSS-KDVAVGLQQR 302 (355)
T ss_pred ------------------------------------------CCccCCCCceEEEEECCCCCCCCCCCH-HHHHHHHHHH
Confidence 1 123358999999999 999876411 0111234555
Q ss_pred HHHHHHHHHHHHHHHH
Q 004396 710 YLHIKSQVERCLDYLL 725 (756)
Q Consensus 710 ~~~v~~~v~~~~~~l~ 725 (756)
.+++.++|++.++.+.
T Consensus 303 mqe~~~~I~~el~~~~ 318 (355)
T PTZ00261 303 MQKVRDEIAAEVAAAE 318 (355)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 6666666666665554
|
|
| >cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.8e-22 Score=198.49 Aligned_cols=166 Identities=24% Similarity=0.333 Sum_probs=132.8
Q ss_pred cCcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccC
Q 004396 484 DGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVA 563 (756)
Q Consensus 484 ~~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~ 563 (756)
...+|+|.||+|+++|+|+|+||+..-+|.+++... .++.++++++..+|.. |+++++++.+|++|++
T Consensus 14 ~~v~v~G~e~lp~~~~~I~v~NH~~s~~D~~~l~~~----~~~~~~~v~~~~~~~~--------p~~~~~~~~~g~ipI~ 81 (203)
T cd07992 14 RRITVVGRENVPKDGPVIFLGNHPNALIDPLLLAAT----LRRPVRFLAKADLFKN--------PLIGWLLESFGAIPVY 81 (203)
T ss_pred eeeEEECCccCCCCCCEEEEeCCccchhhHHHHHHh----cCCCcEEEEEhhhccc--------hHHHHHHHHcCceEeE
Confidence 346899999999999999999999422688877665 4578999999999976 6899999999999998
Q ss_pred HH------------------hHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHH------cCCceeee
Q 004396 564 AR------------------NLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAAR------FGATIVPF 619 (756)
Q Consensus 564 ~~------------------~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~------~g~~IVPv 619 (756)
|. .+.++|++|..|+|||||+|+.. +. .+++++|+++||.+ +++||||+
T Consensus 82 r~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~l~IFPEGtr~~~------~~-~~~fk~G~~~lA~~a~~~~~~~vpIvPv 154 (203)
T cd07992 82 RPKDLARGGIGKISNAAVFDAVGEALKAGGAIGIFPEGGSHDR------PR-LLPLKAGAARMALEALEAGQKDVKIVPV 154 (203)
T ss_pred cCCCcccccccchhHHHHHHHHHHHHhCCCEEEEeCCCCCCCC------CC-ccCcCccHHHHHHHHHhcCCCCCeEEee
Confidence 63 45678899999999999998421 22 34899999999986 69999999
Q ss_pred eeecccchhhhhcCccccccccchHHHHHHhhcccccccccccccccccccccCccCCCCCceEEEEeCCcccCCCCCCc
Q 004396 620 GAVGEDDIADLVLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVS 699 (756)
Q Consensus 620 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~~p~~p~~~~~~~G~PI~~~~~~~~ 699 (756)
++.+.... ..++++++.||+||++++....
T Consensus 155 ~i~~~~~~--------------------------------------------------~~~~~i~i~~g~pi~~~~~~~~ 184 (203)
T cd07992 155 GLNYEDKS--------------------------------------------------RFRSRVLVEFGKPISVSAFEEA 184 (203)
T ss_pred eEEeCCCC--------------------------------------------------CCCCeEEEEECCCccccccccc
Confidence 99644211 1257899999999999987655
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 004396 700 LKDKENANELYLHIKSQVE 718 (756)
Q Consensus 700 ~~~~~~~~~l~~~v~~~v~ 718 (756)
+.+++..+.+++++.++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~ 203 (203)
T cd07992 185 EASRDVEKKLINQLEAELE 203 (203)
T ss_pred ccchhHHHHHHHHHHHhhC
Confidence 5677777777777777653
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins. |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.9e-22 Score=195.76 Aligned_cols=272 Identities=17% Similarity=0.214 Sum_probs=180.0
Q ss_pred CCCCccHHHHHHhhcccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhc--CCcEEEEeccCCCC
Q 004396 140 GYGTDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG--KAFEVRCLHIPVYD 217 (756)
Q Consensus 140 ~~~~~~~~~y~~~~~~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~--~gy~Vi~~Dl~G~G 217 (756)
+|....|++||++.+++..+++. ..+-.|. .+.+.+.+|.++++||.|.++.+|+.++.+|. -..+|+++|+||||
T Consensus 37 e~S~~pWs~yFdekedv~i~~~~-~t~n~Y~-t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHG 114 (343)
T KOG2564|consen 37 EYSPVPWSDYFDEKEDVSIDGSD-LTFNVYL-TLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHG 114 (343)
T ss_pred ccCCCchHHhhccccccccCCCc-ceEEEEE-ecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccC
Confidence 34456789999998777544433 2222333 33334568999999999999999999999993 34788889999999
Q ss_pred CC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh--CCCcceEEEEeCCCCcCCcCCcCCc
Q 004396 218 RT--------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPATSFGRSQLQPL 287 (756)
Q Consensus 218 ~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~--~P~~v~~lVLi~p~~~~~~~~~~~~ 287 (756)
.| +.+.+++|+.++++.+....+ .+|+||||||||.+|.+.|.. .|. +.|+++++...+..-..+..+
T Consensus 115 eTk~~~e~dlS~eT~~KD~~~~i~~~fge~~-~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~m 192 (343)
T KOG2564|consen 115 ETKVENEDDLSLETMSKDFGAVIKELFGELP-PQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNSM 192 (343)
T ss_pred ccccCChhhcCHHHHHHHHHHHHHHHhccCC-CceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHHH
Confidence 98 689999999999999874433 379999999999999988865 355 889999998765444444444
Q ss_pred hhHHhhchhHHH---HhHHhHhhhh-cCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHH--
Q 004396 288 FPILKAMPDELH---CAVPYLLSYV-MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKL-- 361 (756)
Q Consensus 288 ~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 361 (756)
..++...|..+. +++.+.+..- .++... +...+... .....+ ...+.|+.
T Consensus 193 ~~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~~S-ArVsmP~~------~~~~~e-----------------Gh~yvwrtdL 248 (343)
T KOG2564|consen 193 QHFLRNRPKSFKSIEDAIEWHVRSGQLRNRDS-ARVSMPSQ------LKQCEE-----------------GHCYVWRTDL 248 (343)
T ss_pred HHHHhcCCccccchhhHHHHHhcccccccccc-ceEecchh------eeeccC-----------------CCcEEEEeec
Confidence 455555554332 3333332111 111100 00000000 000000 01122211
Q ss_pred ----HHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhcc
Q 004396 362 ----KLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTC 437 (756)
Q Consensus 362 ----~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~ 437 (756)
..+..+...+...+-...+|-++|.++.|.+.. ...+.++..+.++.+++.+||+.+.+.|..++..+- .
T Consensus 249 ~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDk----dLtiGQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~--~ 322 (343)
T KOG2564|consen 249 EKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDK----DLTIGQMQGKFQLQVLPLCGHFVHEDSPHKVAECLC--V 322 (343)
T ss_pred cccchhHHHHHhhhhhHhhCCCccceeEEecccccCc----ceeeeeeccceeeeeecccCceeccCCcchHHHHHH--H
Confidence 223333333445666788999999999888762 334456667889999999999999999999999988 8
Q ss_pred ccccCcCc
Q 004396 438 KYRRSRKL 445 (756)
Q Consensus 438 f~rr~~~~ 445 (756)
||.|++..
T Consensus 323 f~~Rn~~~ 330 (343)
T KOG2564|consen 323 FWIRNRFA 330 (343)
T ss_pred HHhhhccc
Confidence 88887744
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.8e-21 Score=196.99 Aligned_cols=235 Identities=22% Similarity=0.276 Sum_probs=143.4
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC---------hhHHHHH-HHHHHHHhhccCCCCCEEEEE
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---------FEGLVKF-VEETVRREHASSPEKPIYLVG 248 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss---------~~~~a~d-v~~~i~~l~~~~~~~~v~LvG 248 (756)
+|+|||+||++++...|..+++.|+++|+|+++|+||||.|+ +++++++ +..+++.+ +.++++++|
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G 76 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL----GIEPFFLVG 76 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc----CCCeEEEEE
Confidence 378999999999999999999999989999999999999883 5566666 55555553 345899999
Q ss_pred eChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch-hHHhhchhHHH-HhHHhHhhhhcCChhHHHHHhhhcCCC
Q 004396 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF-PILKAMPDELH-CAVPYLLSYVMGDPIKMAMVNIENRLP 326 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (756)
|||||.+|+.+|.++|+.+.+++++++............. .........+. .....+......... ........
T Consensus 77 ~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 152 (251)
T TIGR03695 77 YSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPL----FASQKNLP 152 (251)
T ss_pred eccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCce----eeecccCC
Confidence 9999999999999999999999999886543211100000 00000000000 000000000000000 00000000
Q ss_pred hHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH-HHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q 004396 327 PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS-ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405 (756)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~ 405 (756)
. ...+.+.... .. .........+..... ........+.++++|+++++|++|..++ + ..+.+.+.
T Consensus 153 ~-~~~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~-~~~~~~~~ 218 (251)
T TIGR03695 153 P-EQRQALRAKR----------LA-NNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-Q-IAKEMQKL 218 (251)
T ss_pred h-HHhHHHHHhc----------cc-ccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-H-HHHHHHhc
Confidence 0 0001111100 00 001111111111100 0111224567899999999999998774 4 37778888
Q ss_pred CCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 406 LQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 406 l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.++++++.++++||++++|+|+.+++.|.+
T Consensus 219 ~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~ 248 (251)
T TIGR03695 219 LPNLTLVIIANAGHNIHLENPEAFAKILLA 248 (251)
T ss_pred CCCCcEEEEcCCCCCcCccChHHHHHHHHH
Confidence 899999999999999999999999999874
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-21 Score=189.83 Aligned_cols=176 Identities=16% Similarity=0.178 Sum_probs=141.2
Q ss_pred cCcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccC
Q 004396 484 DGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVA 563 (756)
Q Consensus 484 ~~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~ 563 (756)
-+++|+|.||+|+++|+|+|+|||+. +|.+.+... .+.....+|+..++.. |++.+.+-..|.++++
T Consensus 75 ~r~ev~g~E~L~~~~p~ViVsNHQS~-LDil~m~~i----~p~~cvviaKr~L~yv--------p~~gl~m~L~gvvfId 141 (276)
T KOG2848|consen 75 LRFEVRGEENLPKSKPAVIVSNHQSS-LDILGMGSI----WPKNCVVIAKRSLFYV--------PIFGLAMYLSGVVFID 141 (276)
T ss_pred eEEEEechhhCCccCCeEEEecchhH-HHHHHHHhh----cCCceEEEEeeeeeec--------chHHHHHHHcCceEEe
Confidence 46789999999999999999999976 699888777 4567788999999976 6788889999999999
Q ss_pred HHh-----------HHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhhhhc
Q 004396 564 ARN-----------LFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVL 632 (756)
Q Consensus 564 ~~~-----------~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~~ 632 (756)
|.+ +.++.+++..|-+||||||.... . ++|+|+|++.+|+++++|||||.+.+-.++|..-.
T Consensus 142 R~r~~~Ai~~l~~~~~~mkk~~~kvWvFPEGTRn~~g------~-llPFKKGAF~lAvqaqVPIVPvv~ssy~~f~~~~~ 214 (276)
T KOG2848|consen 142 RSRREKAIDTLDKCAERMKKENRKVWVFPEGTRNKEG------R-LLPFKKGAFHLAVQAQVPIVPVVFSSYGDFYSTKE 214 (276)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCeeEEEccCCccCCCC------c-ccccccceeeeehhcCCCEEEEEEecccccccCcc
Confidence 943 33444556999999999994222 2 44999999999999999999999976666531100
Q ss_pred CccccccccchHHHHHHhhcccccccccccccccccccccCccCCCCCceEEEEeCCcccCCCCCCcCCCHHHHHHHHHH
Q 004396 633 DYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENANELYLH 712 (756)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~~p~~p~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~ 712 (756)
..+- .|.+.+.+.+||+++++ +++++++|.++
T Consensus 215 -----------------------------------------k~f~--sG~v~V~vL~pI~Tegl-----T~ddv~~L~~~ 246 (276)
T KOG2848|consen 215 -----------------------------------------KVFN--SGNVIVRVLPPIPTEGL-----TKDDVDVLSDE 246 (276)
T ss_pred -----------------------------------------ceee--cceEEEEEcCCCCccCC-----CcccHHHHHHH
Confidence 0111 48999999999999986 67889999999
Q ss_pred HHHHHHHHHHHHHHH
Q 004396 713 IKSQVERCLDYLLKK 727 (756)
Q Consensus 713 v~~~v~~~~~~l~~~ 727 (756)
++++|.+.+++.-..
T Consensus 247 ~R~~M~~~~~ei~~~ 261 (276)
T KOG2848|consen 247 CRSAMLETFKEISAE 261 (276)
T ss_pred HHHHHHHHHHHhchh
Confidence 999999888776544
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-21 Score=209.31 Aligned_cols=259 Identities=17% Similarity=0.176 Sum_probs=152.5
Q ss_pred eeeccCCCCC-CCCCEEEEECCCCCchh-----------hHHHhH---hhh-cCCcEEEEeccCC--CCCC---------
Q 004396 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGL-----------GLILHH---KPL-GKAFEVRCLHIPV--YDRT--------- 219 (756)
Q Consensus 167 ~~~~~~G~~~-~~~p~lV~lHG~~~s~~-----------~~~~~~---~~L-~~gy~Vi~~Dl~G--~G~S--------- 219 (756)
++|...|.++ .++++|||+||++++.. .|..++ ..| .++|+|+++|+|| ||.|
T Consensus 18 ~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~ 97 (351)
T TIGR01392 18 VAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGG 97 (351)
T ss_pred EEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCC
Confidence 5777777532 24679999999999774 377775 245 7889999999999 5543
Q ss_pred ----------ChhHHHHHHHHHHHHhhccCCCCC-EEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch
Q 004396 220 ----------PFEGLVKFVEETVRREHASSPEKP-IYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF 288 (756)
Q Consensus 220 ----------s~~~~a~dv~~~i~~l~~~~~~~~-v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~ 288 (756)
+++++++++.+++++++.. + ++|+||||||.+++.+|.++|++++++|++++.......... ..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~ 172 (351)
T TIGR01392 98 RPYGSDFPLITIRDDVKAQKLLLDHLGIE----QIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIA-FN 172 (351)
T ss_pred CcCCCCCCCCcHHHHHHHHHHHHHHcCCC----CceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHH-HH
Confidence 2578999999999987654 6 999999999999999999999999999999986533211000 00
Q ss_pred hHHhhchhHHHHhHHhHhh-hhcCC--h---hHHHH-HhhhcCCChHHHHHHHHhhh----------------hhhhhh-
Q 004396 289 PILKAMPDELHCAVPYLLS-YVMGD--P---IKMAM-VNIENRLPPRIKLEQLSNNL----------------PALLPR- 344 (756)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~-~~~~~--~---~~~~~-~~~~~~~~~~~~~~~~~~~~----------------~~~~~~- 344 (756)
... ....... +.+.. ..... + ..... ...............+.... ..+...
T Consensus 173 ~~~---~~~~~~~-~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (351)
T TIGR01392 173 EVQ---RQAILAD-PNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQ 248 (351)
T ss_pred HHH---HHHHHhC-CCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHH
Confidence 000 0000000 00000 00000 0 00000 00000000000000000000 000000
Q ss_pred hhhhhccCChhhHHHHHHHHHHHH-----HHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEE-----EE
Q 004396 345 LSVMSDIIPKDTLLWKLKLLKSAS-----AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVR-----NF 414 (756)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~-----~i 414 (756)
............+......+.... .+..+.+.+|++|+|+|+|++|.++|++. ++.+.+.+++++++ ++
T Consensus 249 ~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~-~~~~a~~i~~~~~~v~~~~i~ 327 (351)
T TIGR01392 249 GDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAE-SRELAKALPAAGLRVTYVEIE 327 (351)
T ss_pred HHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHH-HHHHHHHHhhcCCceEEEEeC
Confidence 000001111111111112222111 11246788999999999999999999995 99999999988766 56
Q ss_pred cCCCCcccccchhhHHHHhhh
Q 004396 415 KDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 415 ~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+++||++++|+|+.+++.|.+
T Consensus 328 ~~~GH~~~le~p~~~~~~l~~ 348 (351)
T TIGR01392 328 SPYGHDAFLVETDQVEELIRG 348 (351)
T ss_pred CCCCcchhhcCHHHHHHHHHH
Confidence 789999999999999999983
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.5e-21 Score=207.06 Aligned_cols=254 Identities=13% Similarity=0.014 Sum_probs=148.3
Q ss_pred eeeccCCCCC-CCCCEEEEECCCCCchhhHHHhH---hhh-cCCcEEEEeccCCCCCCCh----------hH-----HHH
Q 004396 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGLGLILHH---KPL-GKAFEVRCLHIPVYDRTPF----------EG-----LVK 226 (756)
Q Consensus 167 ~~~~~~G~~~-~~~p~lV~lHG~~~s~~~~~~~~---~~L-~~gy~Vi~~Dl~G~G~Ss~----------~~-----~a~ 226 (756)
++|...|+.. .+.|+||++||++++...|..++ +.| .++|+|+++|+||||.|+. ++ +++
T Consensus 28 l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~ 107 (339)
T PRK07581 28 LAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYD 107 (339)
T ss_pred EEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHH
Confidence 4677777532 24567888888887777776544 467 4689999999999999841 11 467
Q ss_pred HHHH----HHHHhhccCCCCC-EEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhc-------
Q 004396 227 FVEE----TVRREHASSPEKP-IYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAM------- 294 (756)
Q Consensus 227 dv~~----~i~~l~~~~~~~~-v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~------- 294 (756)
|+.+ ++++++.. + ++||||||||.+|+.+|.++|++|+++|++++..................+
T Consensus 108 ~~~~~~~~l~~~lgi~----~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 183 (339)
T PRK07581 108 NVRAQHRLLTEKFGIE----RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFN 183 (339)
T ss_pred HHHHHHHHHHHHhCCC----ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 7765 55666654 7 579999999999999999999999999999875532110000000000000
Q ss_pred -------hhHHHHhHHhHhhhhcCChhHHHHHhhhcCCC---hHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHH
Q 004396 295 -------PDELHCAVPYLLSYVMGDPIKMAMVNIENRLP---PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLL 364 (756)
Q Consensus 295 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (756)
+..........+......+..+... ...... .......... ..............+..+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~ 252 (339)
T PRK07581 184 GGWYAEPPERGLRAHARVYAGWGFSQAFYRQE-LWRAMGYASLEDFLVGFWE----------GNFLPRDPNNLLAMLWTW 252 (339)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhh-hccccChhhHHHHHHHHHH----------HhhcccCcccHHHHHHHh
Confidence 0000000000000000000000000 000000 0000000000 000001112222221111
Q ss_pred HHH--------HHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcC-CCCcccccchhhHHHHhhh
Q 004396 365 KSA--------SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKD-NGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 365 ~~~--------~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~-aGH~~~~e~p~~~~~~I~~ 435 (756)
... ..+....+.+|++|+|+|+|++|.++|++. ++.+.+.+++++++++++ +||+.++|+|++++..|++
T Consensus 253 ~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~-~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~ 331 (339)
T PRK07581 253 QRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPED-CEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDA 331 (339)
T ss_pred hhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHH-HHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHH
Confidence 110 012346788999999999999999999985 899999999999999998 9999999999999999984
Q ss_pred c
Q 004396 436 T 436 (756)
Q Consensus 436 ~ 436 (756)
.
T Consensus 332 ~ 332 (339)
T PRK07581 332 A 332 (339)
T ss_pred H
Confidence 3
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-21 Score=209.16 Aligned_cols=250 Identities=16% Similarity=0.154 Sum_probs=146.2
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchh------------hHHHhHh---hh-cCCcEEEEeccCCCCCC-----ChhHHH
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGL------------GLILHHK---PL-GKAFEVRCLHIPVYDRT-----PFEGLV 225 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~------------~~~~~~~---~L-~~gy~Vi~~Dl~G~G~S-----s~~~~a 225 (756)
++|...|. +++++||+||+.++.. .|..+++ .| +++|+|+++|+||||.| +.++++
T Consensus 48 l~y~~~G~---~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~~~~~~~~a 124 (343)
T PRK08775 48 LRYELIGP---AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDVPIDTADQA 124 (343)
T ss_pred EEEEEecc---CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCCCCCHHHHH
Confidence 56777774 1334666666655554 6888886 57 57899999999999977 578899
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhh---ch-----hH
Q 004396 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKA---MP-----DE 297 (756)
Q Consensus 226 ~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~---~~-----~~ 297 (756)
+|+.+++++++.+ +.++|+||||||.+|+.+|.++|++|.++|++++........ ......... .. ..
T Consensus 125 ~dl~~ll~~l~l~---~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 200 (343)
T PRK08775 125 DAIALLLDALGIA---RLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYA-AAWRALQRRAVALGQLQCAEK 200 (343)
T ss_pred HHHHHHHHHcCCC---cceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHH-HHHHHHHHHHHHcCCCCCCch
Confidence 9999999997664 135799999999999999999999999999999864321000 000000000 00 00
Q ss_pred HHHhHHhHhhh-hcCChhHHHHHhhhcCCC-----hHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHH
Q 004396 298 LHCAVPYLLSY-VMGDPIKMAMVNIENRLP-----PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA 371 (756)
Q Consensus 298 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (756)
........+.. .......+ ...+..... .......+..... ............. ...... ...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~---~~~~~~-~~~ 269 (343)
T PRK08775 201 HGLALARQLAMLSYRTPEEF-EERFDAPPEVINGRVRVAAEDYLDAAG------AQYVARTPVNAYL---RLSESI-DLH 269 (343)
T ss_pred hHHHHHHHHHHHHcCCHHHH-HHHhCCCccccCCCccchHHHHHHHHH------HHHHHhcChhHHH---HHHHHH-hhc
Confidence 00000000000 00000000 000000000 0000000000000 0000000111111 111100 001
Q ss_pred hhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhC-CCeEEEEEcC-CCCcccccchhhHHHHhhh
Q 004396 372 NSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL-QNCIVRNFKD-NGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 372 ~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l-~~~~l~~i~~-aGH~~~~e~p~~~~~~I~~ 435 (756)
...+.+|++|+|+|+|++|.++|.+. .+++.+.+ ++++++++++ +||++++|+|+++++.|.+
T Consensus 270 ~~~l~~I~~PtLvi~G~~D~~~p~~~-~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~ 334 (343)
T PRK08775 270 RVDPEAIRVPTVVVAVEGDRLVPLAD-LVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTT 334 (343)
T ss_pred CCChhcCCCCeEEEEeCCCEeeCHHH-HHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHH
Confidence 23468899999999999999999884 88888877 6999999985 9999999999999999983
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-20 Score=205.59 Aligned_cols=246 Identities=18% Similarity=0.134 Sum_probs=144.3
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCCh--------h----HHHHHHHHHHHHhhccCCCCCEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPF--------E----GLVKFVEETVRREHASSPEKPIY 245 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss~--------~----~~a~dv~~~i~~l~~~~~~~~v~ 245 (756)
++|+|||+||++++...|...+..|+++|+|+++|+||||.|+. + .+++++.++++.++. .+++
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~----~~~~ 179 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNL----SNFI 179 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCC----CCeE
Confidence 57899999999999999998899998889999999999999831 1 234556666665433 3899
Q ss_pred EEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHH-------
Q 004396 246 LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAM------- 318 (756)
Q Consensus 246 LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 318 (756)
|+||||||.+|+.+|.++|+.++++|+++|+......... ..........+...+...+......+.....
T Consensus 180 lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~ 257 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDK--SEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGP 257 (402)
T ss_pred EEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchh--HHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhH
Confidence 9999999999999999999999999999986532221100 0000000000000000000000000000000
Q ss_pred -----H---hhhcC-----CChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHH----HHHHHHhhhccCCCCc
Q 004396 319 -----V---NIENR-----LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK----SASAYANSRLHAVKAE 381 (756)
Q Consensus 319 -----~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~i~~P 381 (756)
. .+... ... +....+.+ ++.... .........+..+. .........+.++++|
T Consensus 258 ~l~~~~~~~~~~~~~~~~~l~~-~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 327 (402)
T PLN02894 258 NLVRRYTTARFGAHSTGDILSE-EESKLLTD-------YVYHTL--AAKASGELCLKYIFSFGAFARKPLLESASEWKVP 327 (402)
T ss_pred HHHHHHHHHHhhhcccccccCc-chhhHHHH-------HHHHhh--cCCCchHHHHHHhccCchhhcchHhhhcccCCCC
Confidence 0 00000 000 00000000 000000 00000000011110 0112233667889999
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhC-CCeEEEEEcCCCCcccccchhhHHHHhhhc--ccccc
Q 004396 382 VLVLASGKDNMLPSEDEAKRLNNSL-QNCIVRNFKDNGHTLLLEEGISLLTIIKGT--CKYRR 441 (756)
Q Consensus 382 vLvI~G~~D~~vp~~~~~~~l~~~l-~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~--~f~rr 441 (756)
+++|+|++|.+.+.. .+.+.+.. +.+++++++++||++++|+|+.|++.|.+. .|++.
T Consensus 328 ~liI~G~~D~i~~~~--~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 328 TTFIYGRHDWMNYEG--AVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred EEEEEeCCCCCCcHH--HHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccC
Confidence 999999999877643 55665555 468999999999999999999999999976 55554
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-20 Score=197.09 Aligned_cols=232 Identities=13% Similarity=0.158 Sum_probs=145.4
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvG 248 (756)
++|+|||+||++++...|..+...|. .+|+|+++|+||||.| +++++++++.++++.+.. .++++|||
T Consensus 17 ~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~---~~~v~lvG 93 (273)
T PLN02211 17 QPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPE---NEKVILVG 93 (273)
T ss_pred CCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCC---CCCEEEEE
Confidence 47899999999999999999999994 6899999999999965 578889999999987532 24899999
Q ss_pred eChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhh-hcCChhHHHHHhhhcCCCh
Q 004396 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSY-VMGDPIKMAMVNIENRLPP 327 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 327 (756)
|||||.++..++.++|++++++|++++.... .............+.... ....+.. ......... .......
T Consensus 94 hS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~--~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~ 166 (273)
T PLN02211 94 HSAGGLSVTQAIHRFPKKICLAVYVAATMLK--LGFQTDEDMKDGVPDLSE--FGDVYELGFGLGPDQPP---TSAIIKK 166 (273)
T ss_pred ECchHHHHHHHHHhChhheeEEEEeccccCC--CCCCHHHHHhccccchhh--hccceeeeeccCCCCCC---ceeeeCH
Confidence 9999999999999999999999999764311 000000000000100000 0000000 000000000 0000000
Q ss_pred HHHHHH-HHhhhhhhhhhhhhhhccCChhhHHHHHHHHH-----HHH-HHHhhhccCC-CCcEEEEEeCCCCCCCCHHHH
Q 004396 328 RIKLEQ-LSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-----SAS-AYANSRLHAV-KAEVLVLASGKDNMLPSEDEA 399 (756)
Q Consensus 328 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~l~~i-~~PvLvI~G~~D~~vp~~~~~ 399 (756)
+.... ++. ..+.+...+...... ... ........++ ++|+++|.|++|..+|++. .
T Consensus 167 -~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~-~ 230 (273)
T PLN02211 167 -EFRRKILYQ--------------MSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQ-Q 230 (273)
T ss_pred -HHHHHHHhc--------------CCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHH-H
Confidence 00000 000 001111111101000 000 0001223345 7899999999999999995 8
Q ss_pred HHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhc
Q 004396 400 KRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (756)
Q Consensus 400 ~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (756)
+.+.+.+++.+++.++ +||.+++++|+++++.|.+.
T Consensus 231 ~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~ 266 (273)
T PLN02211 231 EAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKA 266 (273)
T ss_pred HHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHH
Confidence 9999999999999997 89999999999999999854
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.9e-20 Score=194.38 Aligned_cols=259 Identities=20% Similarity=0.199 Sum_probs=146.4
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhh-HHHhHhhhcC-CcEEEEeccCCCCCCC----------hhHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLG-LILHHKPLGK-AFEVRCLHIPVYDRTP----------FEGL 224 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~-~~~~~~~L~~-gy~Vi~~Dl~G~G~Ss----------~~~~ 224 (756)
++.+++. +.|...+.+ ..+++|||+||++++... |..+...+.+ +|+|+++|+||||.|+ ++++
T Consensus 7 ~~~~~~~---~~~~~~~~~-~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 82 (288)
T TIGR01250 7 ITVDGGY---HLFTKTGGE-GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYF 82 (288)
T ss_pred ecCCCCe---EEEEeccCC-CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHH
Confidence 3445544 234444431 126789999998665554 5555555654 8999999999999872 5778
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHh
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (756)
++++.+++++++.. +++++||||||.+++.+|.++|+++.++|++++........ .........++......+..
T Consensus 83 ~~~~~~~~~~~~~~----~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (288)
T TIGR01250 83 VDELEEVREKLGLD----KFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYV-KELNRLRKELPPEVRAAIKR 157 (288)
T ss_pred HHHHHHHHHHcCCC----cEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHH-HHHHHHHhhcChhHHHHHHH
Confidence 89998888886544 79999999999999999999999999999998754221100 00000001111100000000
Q ss_pred Hhhh-hcCChhHHHHH-hhh-----cCCChHHHHHHHHhhhhhhhhhhhhhhccC-ChhhHHHHHHHHHHHHHHHhhhcc
Q 004396 305 LLSY-VMGDPIKMAMV-NIE-----NRLPPRIKLEQLSNNLPALLPRLSVMSDII-PKDTLLWKLKLLKSASAYANSRLH 376 (756)
Q Consensus 305 ~~~~-~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~ 376 (756)
.... ...++...... ... ................. ....... ....+.. ...+ ...+..+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~--~~~~~~~~l~ 228 (288)
T TIGR01250 158 CEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMN------TNVYNIMQGPNEFTI-TGNL--KDWDITDKLS 228 (288)
T ss_pred HHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccC------HHHHhcccCCccccc-cccc--cccCHHHHhh
Confidence 0000 00000000000 000 00000000000000000 0000000 0000000 0000 0001225668
Q ss_pred CCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 377 AVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 377 ~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++++|+++++|++|.+ +++ ..+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 229 ~i~~P~lii~G~~D~~-~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 285 (288)
T TIGR01250 229 EIKVPTLLTVGEFDTM-TPE-AAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSD 285 (288)
T ss_pred ccCCCEEEEecCCCcc-CHH-HHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHH
Confidence 8999999999999985 556 48889999999999999999999999999999999973
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-20 Score=206.23 Aligned_cols=261 Identities=15% Similarity=0.136 Sum_probs=155.9
Q ss_pred eeeccCCCCC-CCCCEEEEECCCCCchhh-------------HHHhHh---hh-cCCcEEEEeccCCC-CCC--------
Q 004396 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGLG-------------LILHHK---PL-GKAFEVRCLHIPVY-DRT-------- 219 (756)
Q Consensus 167 ~~~~~~G~~~-~~~p~lV~lHG~~~s~~~-------------~~~~~~---~L-~~gy~Vi~~Dl~G~-G~S-------- 219 (756)
++|...|.++ .++|+|||+||++++... |..++. .| .++|+|+++|++|+ |.|
T Consensus 35 ~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~ 114 (379)
T PRK00175 35 LAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINP 114 (379)
T ss_pred EEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCC
Confidence 5677777642 236899999999999985 666652 44 78999999999983 322
Q ss_pred -------------ChhHHHHHHHHHHHHhhccCCCCC-EEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcC
Q 004396 220 -------------PFEGLVKFVEETVRREHASSPEKP-IYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQ 285 (756)
Q Consensus 220 -------------s~~~~a~dv~~~i~~l~~~~~~~~-v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~ 285 (756)
+++++++++.+++++++.. + ++++||||||.+++.+|.++|++++++|++++..........
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 190 (379)
T PRK00175 115 DTGKPYGSDFPVITIRDWVRAQARLLDALGIT----RLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIA 190 (379)
T ss_pred CCCCcccCCCCcCCHHHHHHHHHHHHHHhCCC----CceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHH
Confidence 4779999999999997765 6 589999999999999999999999999999986533211000
Q ss_pred CchhHHhhch---h-------------HHHHhHHhHhhh-hcCChhHHHHHhhhcCCChH---------HHHHHHHhhhh
Q 004396 286 PLFPILKAMP---D-------------ELHCAVPYLLSY-VMGDPIKMAMVNIENRLPPR---------IKLEQLSNNLP 339 (756)
Q Consensus 286 ~~~~~~~~~~---~-------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 339 (756)
........+. . ........++.. ......... ..+....... ...+.+....
T Consensus 191 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~-~~f~~~~~~~~~~~~~~~~~~~~~~l~~~- 268 (379)
T PRK00175 191 FNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELD-EKFGRELQSGELPFGFDVEFQVESYLRYQ- 268 (379)
T ss_pred HHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHH-hhcCccccccccccCCCccchHHHHHHHH-
Confidence 0000000000 0 000000000000 000000000 0000000000 0000000000
Q ss_pred hhhhhhhhhhccCChhhHHHHHHHHHHHH------HHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCe----
Q 004396 340 ALLPRLSVMSDIIPKDTLLWKLKLLKSAS------AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC---- 409 (756)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~---- 409 (756)
..........+.+......+.... .+....+.+|++|+|+|+|++|.++|++. ++.+.+.++++
T Consensus 269 -----~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~-~~~la~~i~~a~~~~ 342 (379)
T PRK00175 269 -----GDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPAR-SREIVDALLAAGADV 342 (379)
T ss_pred -----HHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHH-HHHHHHHHHhcCCCe
Confidence 000011112222222222222111 11346788999999999999999999995 99999999887
Q ss_pred EEEEEc-CCCCcccccchhhHHHHhhhcccccc
Q 004396 410 IVRNFK-DNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 410 ~l~~i~-~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
++++++ ++||++++|+|+++++.|. .|+.+
T Consensus 343 ~l~~i~~~~GH~~~le~p~~~~~~L~--~FL~~ 373 (379)
T PRK00175 343 SYAEIDSPYGHDAFLLDDPRYGRLVR--AFLER 373 (379)
T ss_pred EEEEeCCCCCchhHhcCHHHHHHHHH--HHHHh
Confidence 788785 8999999999999999998 45544
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-20 Score=196.63 Aligned_cols=261 Identities=20% Similarity=0.199 Sum_probs=166.1
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCC---------hhHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP---------FEGL 224 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss---------~~~~ 224 (756)
.+...||...++........ ...+||++||++....-|..++..| ..||.|+++|+||||.|. ++++
T Consensus 13 ~~~~~d~~~~~~~~~~~~~~---~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~ 89 (298)
T COG2267 13 YFTGADGTRLRYRTWAAPEP---PKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADY 89 (298)
T ss_pred eeecCCCceEEEEeecCCCC---CCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHH
Confidence 44566776644444433322 2378999999999999999999999 789999999999999995 9999
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHh
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (756)
.+|+..+++......+..+++|+||||||.|++.++.+++..++++||.+|+..... ............... ..
T Consensus 90 ~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~--~~~~~~~~~~~~~~~----~~ 163 (298)
T COG2267 90 VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG--AILRLILARLALKLL----GR 163 (298)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh--hHHHHHHHHHhcccc----cc
Confidence 999999999988767788999999999999999999999999999999999875532 000000000000000 00
Q ss_pred HhhhhcCChhHHHHHhh-hcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEE
Q 004396 305 LLSYVMGDPIKMAMVNI-ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVL 383 (756)
Q Consensus 305 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 383 (756)
+...+..+. .. .... ....+......+.+..-. .......+..|....+.............+++|+|
T Consensus 164 ~~p~~~~~~-~~-~~~~~~~~~sr~~~~~~~~~~dP---------~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvL 232 (298)
T COG2267 164 IRPKLPVDS-NL-LEGVLTDDLSRDPAEVAAYEADP---------LIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVL 232 (298)
T ss_pred cccccccCc-cc-ccCcCcchhhcCHHHHHHHhcCC---------ccccCCccHHHHHHHHHhhcccchhccccccCCEE
Confidence 000000000 00 0000 000000000001111000 00122334444444333332122345678899999
Q ss_pred EEEeCCCCCCC-CHHHHHHHHHhC--CCeEEEEEcCCCCcccccchhhHHHHhhhc
Q 004396 384 VLASGKDNMLP-SEDEAKRLNNSL--QNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (756)
Q Consensus 384 vI~G~~D~~vp-~~~~~~~l~~~l--~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (756)
+++|++|.+++ .+. ..++.+.. ++.++++++|+.|.++.|.+....+.++..
T Consensus 233 ll~g~~D~vv~~~~~-~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~ 287 (298)
T COG2267 233 LLQGGDDRVVDNVEG-LARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDI 287 (298)
T ss_pred EEecCCCccccCcHH-HHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHH
Confidence 99999999999 574 66666655 467899999999999999876544444433
|
|
| >PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-20 Score=189.21 Aligned_cols=124 Identities=25% Similarity=0.378 Sum_probs=103.2
Q ss_pred cCcEEecccCCCC-CCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCcccc
Q 004396 484 DGKIVKGLAGVPN-EGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPV 562 (756)
Q Consensus 484 ~~~~v~g~~~lp~-~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v 562 (756)
.+++++|.||+|+ ++|+|+|+||+++ +|.+++.. ..+.++++++..+|.. |+++++++..|++|+
T Consensus 35 ~~~~v~g~e~lp~~~~p~iiv~NH~S~-~D~~~l~~-----~~~~~~~v~k~~l~~~--------P~~g~~~~~~~~i~v 100 (214)
T PLN02901 35 YKIEVEGLENLPSPDEPAVYVSNHQSF-LDIYTLFH-----LGRPFKFISKTSIFLI--------PIIGWAMYMTGHIPL 100 (214)
T ss_pred eeEEEECCccCCCCCCcEEEEECCCCc-hHHHHHhh-----cCCceEEEEEHHhhhc--------cHHHHHHHHCCcEEE
Confidence 4678999999996 6899999999977 69876542 2456789999999987 688999999999999
Q ss_pred CHH----------hHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchh
Q 004396 563 AAR----------NLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIA 628 (756)
Q Consensus 563 ~~~----------~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~ 628 (756)
+|+ .+.+.|++|..|+|||||+|... + ++ .++++|++++|.++|+||||+++.|.++.+
T Consensus 101 ~R~~~~~~~~~~~~~~~~l~~g~~v~IfPEGtr~~~----~--~~-~~f~~G~~~lA~~~~~pIvPv~i~g~~~~~ 169 (214)
T PLN02901 101 KRMDRRSQLECLKRCMELLKKGASVFFFPEGTRSKD----G--KL-AAFKKGAFSVAAKTGVPVVPITLVGTGKIM 169 (214)
T ss_pred ecCCcHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCC----C--cc-cCchhhHHHHHHHcCCCEEEEEEecchhhC
Confidence 873 35678899999999999998522 1 22 388999999999999999999999887663
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-19 Score=196.97 Aligned_cols=236 Identities=18% Similarity=0.222 Sum_probs=149.6
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvG 248 (756)
..++|||+||++++...|..+++.| .++|+|+++|+||||.| +++++++|+.++++.+....+..+++++|
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 214 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFG 214 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 3678999999999998999999999 57999999999999987 36778899999999988766666899999
Q ss_pred eChhhHHHHHHHHhCC---CcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCC
Q 004396 249 DSFGGCLALAVAARNP---TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRL 325 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P---~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (756)
|||||.+++.++. +| +.++++|+.+|+...... .+....+........+.+. ....+. ...
T Consensus 215 hSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~-----~~~~~~~~~l~~~~~p~~~-~~~~~~---------~~~ 278 (395)
T PLN02652 215 HSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA-----HPIVGAVAPIFSLVAPRFQ-FKGANK---------RGI 278 (395)
T ss_pred ECHHHHHHHHHHh-ccCcccccceEEEECcccccccc-----hHHHHHHHHHHHHhCCCCc-ccCccc---------ccC
Confidence 9999999997764 55 479999999987532111 0111111110000001000 000000 000
Q ss_pred ChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q 004396 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405 (756)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~ 405 (756)
............+.. +. .. .......+....+. ...+....+.++++|+|+++|++|.++|++. ++.+.+.
T Consensus 279 ~~s~~~~~~~~~~~d--p~---~~--~g~i~~~~~~~~~~-~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~-a~~l~~~ 349 (395)
T PLN02652 279 PVSRDPAALLAKYSD--PL---VY--TGPIRVRTGHEILR-ISSYLTRNFKSVTVPFMVLHGTADRVTDPLA-SQDLYNE 349 (395)
T ss_pred CcCCCHHHHHHHhcC--CC---cc--cCCchHHHHHHHHH-HHHHHHhhcccCCCCEEEEEeCCCCCCCHHH-HHHHHHh
Confidence 000000000000000 00 00 00001111111111 1122346788999999999999999999995 8888887
Q ss_pred CC--CeEEEEEcCCCCccccc-chhhHHHHhhhccccc
Q 004396 406 LQ--NCIVRNFKDNGHTLLLE-EGISLLTIIKGTCKYR 440 (756)
Q Consensus 406 l~--~~~l~~i~~aGH~~~~e-~p~~~~~~I~~~~f~r 440 (756)
++ +.+++++++++|.++.| +++++.+.+. .|++
T Consensus 350 ~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~--~FL~ 385 (395)
T PLN02652 350 AASRHKDIKLYDGFLHDLLFEPEREEVGRDII--DWME 385 (395)
T ss_pred cCCCCceEEEECCCeEEeccCCCHHHHHHHHH--HHHH
Confidence 65 47999999999999887 6788888777 4544
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.1e-20 Score=200.56 Aligned_cols=234 Identities=21% Similarity=0.221 Sum_probs=148.9
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccC
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASS 239 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~ 239 (756)
++|...|. .++++|||+||++++...|..+...|.++|+|+++|+||||.| +++++++++.++++.++..
T Consensus 121 i~~~~~g~--~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~- 197 (371)
T PRK14875 121 VRYLRLGE--GDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALGIE- 197 (371)
T ss_pred EEEecccC--CCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCc-
Confidence 35555554 2478999999999999999999999988899999999999988 5888999999999885543
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchh-HHHHhHHhHhhhhcCChhHHHH
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD-ELHCAVPYLLSYVMGDPIKMAM 318 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 318 (756)
+++|+||||||.+++.+|.++|+++.++|+++|......... . +...+.. .....+...+.....++..
T Consensus 198 ---~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 267 (371)
T PRK14875 198 ---RAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEING-D---YIDGFVAAESRRELKPVLELLFADPAL--- 267 (371)
T ss_pred ---cEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccch-h---HHHHhhcccchhHHHHHHHHHhcChhh---
Confidence 899999999999999999999999999999988642211110 0 0000000 0000011111111111100
Q ss_pred HhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH---HHHHHhhhccCCCCcEEEEEeCCCCCCCC
Q 004396 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS---ASAYANSRLHAVKAEVLVLASGKDNMLPS 395 (756)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~PvLvI~G~~D~~vp~ 395 (756)
... ........... .......+......... ...+....+.++++|+|+++|++|.++|.
T Consensus 268 ------~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~ 330 (371)
T PRK14875 268 ------VTR-QMVEDLLKYKR----------LDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPA 330 (371)
T ss_pred ------CCH-HHHHHHHHHhc----------cccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCH
Confidence 000 00000000000 00000000000000000 00112245678899999999999999988
Q ss_pred HHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 396 EDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 396 ~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
+. .+.+ .+++++++++++||++++|+|+++++.|.
T Consensus 331 ~~-~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 365 (371)
T PRK14875 331 AH-AQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLLA 365 (371)
T ss_pred HH-Hhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHHH
Confidence 74 5443 34789999999999999999999999997
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.9e-20 Score=231.03 Aligned_cols=253 Identities=15% Similarity=0.132 Sum_probs=159.7
Q ss_pred CCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC---------------hhHHHH
Q 004396 162 GPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---------------FEGLVK 226 (756)
Q Consensus 162 ~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss---------------~~~~a~ 226 (756)
+.-.|++|.+.|+ .+++++|||+||++++...|..++..|++.|+|+++|+||||.|+ ++++++
T Consensus 1355 ~~~~~i~~~~~G~-~~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~ 1433 (1655)
T PLN02980 1355 GFSCLIKVHEVGQ-NAEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVAD 1433 (1655)
T ss_pred ceEEEEEEEecCC-CCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHH
Confidence 4556788888775 235689999999999999999999999888999999999999873 566788
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHH-hhchhHHH-HhHHh
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPIL-KAMPDELH-CAVPY 304 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~ 304 (756)
++..+++++... +++|+||||||.+|+.+|.++|++++++|++++................ ........ .....
T Consensus 1434 ~l~~ll~~l~~~----~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 1509 (1655)
T PLN02980 1434 LLYKLIEHITPG----KVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEI 1509 (1655)
T ss_pred HHHHHHHHhCCC----CEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHH
Confidence 888888886544 8999999999999999999999999999999875432211100000000 00000000 00000
Q ss_pred HhhhhcCChhHHHHHhhhcCC-ChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHH-HHHHHHhhhccCCCCcE
Q 004396 305 LLSYVMGDPIKMAMVNIENRL-PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-SASAYANSRLHAVKAEV 382 (756)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pv 382 (756)
....++.... .... ......+.... .........+...+..+. .......+.+.++++|+
T Consensus 1510 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~Pt 1571 (1655)
T PLN02980 1510 FLENWYSGEL-------WKSLRNHPHFNKIVAS-----------RLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPL 1571 (1655)
T ss_pred HHHHhccHHH-------hhhhccCHHHHHHHHH-----------HHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCE
Confidence 0000000000 0000 00000000000 000001111111111111 01112336789999999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhCCC------------eEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 383 LVLASGKDNMLPSEDEAKRLNNSLQN------------CIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 383 LvI~G~~D~~vp~~~~~~~l~~~l~~------------~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
|+|+|++|..++ +. ++++.+.+++ +++++++++||++++|+|+.+++.|. .|+.+
T Consensus 1572 LlI~Ge~D~~~~-~~-a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~--~FL~~ 1638 (1655)
T PLN02980 1572 LLVVGEKDVKFK-QI-AQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALR--KFLTR 1638 (1655)
T ss_pred EEEEECCCCccH-HH-HHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHH--HHHHh
Confidence 999999999875 43 7778877765 48999999999999999999999998 46654
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-19 Score=179.55 Aligned_cols=228 Identities=19% Similarity=0.216 Sum_probs=157.7
Q ss_pred CCCEEEEECCCCCch-hhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHh--hccCCCCCEE
Q 004396 178 GSPTLLFLPGIDGLG-LGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRRE--HASSPEKPIY 245 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l--~~~~~~~~v~ 245 (756)
..-.|+++||++... ..|...+..| ..||.|+++|++|||.| +++.+++|+..+++.. ...+++.+.+
T Consensus 53 pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~F 132 (313)
T KOG1455|consen 53 PRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRF 132 (313)
T ss_pred CceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCee
Confidence 355899999998876 6777788888 67999999999999999 5899999999999964 4456678999
Q ss_pred EEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHh--------hhhcCChhHHH
Q 004396 246 LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL--------SYVMGDPIKMA 317 (756)
Q Consensus 246 LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 317 (756)
|.||||||+|++.++.++|+..+|+|+++|............ ....+...+...+|.+. ...+.++
T Consensus 133 L~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p--~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp---- 206 (313)
T KOG1455|consen 133 LFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHP--PVISILTLLSKLIPTWKIVPTKDIIDVAFKDP---- 206 (313)
T ss_pred eeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCc--HHHHHHHHHHHhCCceeecCCccccccccCCH----
Confidence 999999999999999999999999999999875544332221 12212122222222221 1111111
Q ss_pred HHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCC-hhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCH
Q 004396 318 MVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSE 396 (756)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~ 396 (756)
+..+....+ ...+. ...+.-...+++ ...++...+.++++|.+++||++|.++.++
T Consensus 207 -----------~~r~~~~~n-----------pl~y~g~pRl~T~~ElLr-~~~~le~~l~~vtvPflilHG~dD~VTDp~ 263 (313)
T KOG1455|consen 207 -----------EKRKILRSD-----------PLCYTGKPRLKTAYELLR-VTADLEKNLNEVTVPFLILHGTDDKVTDPK 263 (313)
T ss_pred -----------HHHHHhhcC-----------CceecCCccHHHHHHHHH-HHHHHHHhcccccccEEEEecCCCcccCcH
Confidence 111111110 00011 112222223333 334456889999999999999999999999
Q ss_pred HHHHHHHHhCC--CeEEEEEcCCCCcccc-cchhhHHHHhhh
Q 004396 397 DEAKRLNNSLQ--NCIVRNFKDNGHTLLL-EEGISLLTIIKG 435 (756)
Q Consensus 397 ~~~~~l~~~l~--~~~l~~i~~aGH~~~~-e~p~~~~~~I~~ 435 (756)
. ++.+.+..+ +.++..+||.-|.++. |-++++.....+
T Consensus 264 ~-Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~D 304 (313)
T KOG1455|consen 264 V-SKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGD 304 (313)
T ss_pred H-HHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHH
Confidence 5 999999886 7899999999999998 555555544443
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.8e-20 Score=202.95 Aligned_cols=259 Identities=13% Similarity=0.165 Sum_probs=147.5
Q ss_pred cccccCCCCCc--eeeeeccCCCCCCCCCEEEEECCCCCchhh-H-HHhHhhh-cCCcEEEEeccCCCCCCC-------h
Q 004396 154 KEIIKPDGGPP--RWFCPVDCGRPLKGSPTLLFLPGIDGLGLG-L-ILHHKPL-GKAFEVRCLHIPVYDRTP-------F 221 (756)
Q Consensus 154 ~~~~~~dg~~~--~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~-~-~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-------~ 221 (756)
+.+...||+.. .|+..... ....++|+||++||++++... | ..++..+ +++|+|+++|+||||.|. .
T Consensus 74 e~l~~~DG~~~~ldw~~~~~~-~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~ 152 (388)
T PLN02511 74 ECLRTPDGGAVALDWVSGDDR-ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYS 152 (388)
T ss_pred EEEECCCCCEEEEEecCcccc-cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEc
Confidence 34556777764 34332111 112357899999999776543 4 4455544 789999999999999984 2
Q ss_pred hHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCc--ceEEEEeCCCCcCCcCCcCCchhHHhhchhHHH
Q 004396 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTI--DLILILSNPATSFGRSQLQPLFPILKAMPDELH 299 (756)
Q Consensus 222 ~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~--v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~ 299 (756)
..+++|+.++++++...++..+++++||||||.+++.++.++|+. +.++++++++....... ..+...+.....
T Consensus 153 ~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~----~~~~~~~~~~y~ 228 (388)
T PLN02511 153 ASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIAD----EDFHKGFNNVYD 228 (388)
T ss_pred CCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHH----HHHhccHHHHHH
Confidence 467899999999998877777999999999999999999999987 78888777644320000 000000000000
Q ss_pred HhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCC
Q 004396 300 CAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVK 379 (756)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 379 (756)
..+...+........... ........... ... ...+..+...+.... ....... ..+. .......+.+|+
T Consensus 229 ~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~-~~~-~~~~~~fd~~~t~~~--~gf~~~~---~yy~--~~s~~~~L~~I~ 298 (388)
T PLN02511 229 KALAKALRKIFAKHALLF-EGLGGEYNIPL-VAN-AKTVRDFDDGLTRVS--FGFKSVD---AYYS--NSSSSDSIKHVR 298 (388)
T ss_pred HHHHHHHHHHHHHHHHHH-hhCCCccCHHH-HHh-CCCHHHHHHhhhhhc--CCCCCHH---HHHH--HcCchhhhccCC
Confidence 000000000000000000 00000000000 000 000000000000000 0000000 0011 011236788999
Q ss_pred CcEEEEEeCCCCCCCCHHHH-HHHHHhCCCeEEEEEcCCCCcccccchhh
Q 004396 380 AEVLVLASGKDNMLPSEDEA-KRLNNSLQNCIVRNFKDNGHTLLLEEGIS 428 (756)
Q Consensus 380 ~PvLvI~G~~D~~vp~~~~~-~~l~~~l~~~~l~~i~~aGH~~~~e~p~~ 428 (756)
+|+|+|+|++|++++.+. . ..+.+..+++++++++++||+.++|+|+.
T Consensus 299 vPtLiI~g~dDpi~p~~~-~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~ 347 (388)
T PLN02511 299 VPLLCIQAANDPIAPARG-IPREDIKANPNCLLIVTPSGGHLGWVAGPEA 347 (388)
T ss_pred CCeEEEEcCCCCcCCccc-CcHhHHhcCCCEEEEECCCcceeccccCCCC
Confidence 999999999999999873 4 45667789999999999999999999865
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-18 Score=186.90 Aligned_cols=113 Identities=19% Similarity=0.221 Sum_probs=87.7
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCC---------hhHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP---------FEGL 224 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss---------~~~~ 224 (756)
.+...||.. ++|.+.|.+ ++++|||+||++++...+ .....+ .++|+|+++|+||||.|+ .+++
T Consensus 8 ~~~~~~~~~---l~y~~~g~~--~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 81 (306)
T TIGR01249 8 YLNVSDNHQ---LYYEQSGNP--DGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDL 81 (306)
T ss_pred eEEcCCCcE---EEEEECcCC--CCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHH
Confidence 344445555 456666652 467899999988776543 333444 468999999999999883 5678
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
++|+..++++++.. +++++||||||.+++.+|.++|++++++|++++..
T Consensus 82 ~~dl~~l~~~l~~~----~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 82 VADIEKLREKLGIK----NWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHcCCC----CEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 88888888886544 89999999999999999999999999999998754
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >KOG0831 consensus Acyl-CoA:diacylglycerol acyltransferase (DGAT) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-19 Score=182.28 Aligned_cols=188 Identities=22% Similarity=0.260 Sum_probs=156.1
Q ss_pred CceeccccccccccccccccCCCccHHHHHHHcCccccCHHhHHHHhcC---CCeEEEEeCcchhccccCCcceeEEcCC
Q 004396 525 NIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARNLFKLLST---KSHVLLYPGGAREALHYKGEEYKLFWPE 601 (756)
Q Consensus 525 ~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~~~~~~~l~~---g~~v~ifPeG~re~~~~~~~~~~l~~~~ 601 (756)
++..+.++....|.. |++|+++++.|.+.|+++++..+|.+ |++|+|-+||+.|++..+++.+.|.++.
T Consensus 134 gi~~~l~tl~~~F~~--------P~~Re~l~~~Gl~svSk~s~~~~Ls~~~~Gnav~IVvGGAqEaL~s~PG~~~L~Lk~ 205 (334)
T KOG0831|consen 134 GIRPKLMTLSGQFYT--------PFLREYLMSLGLCSVSRESIEYLLSKKGKGNAVVIVVGGAQEALDSHPGKNTLTLKN 205 (334)
T ss_pred CCCHHHcccccceec--------cHHHHHHHHcCCccccHHHHHHHhccCCCCCEEEEEeCchHHHHHhCCCCceEEEec
Confidence 456777777777776 69999999999999999999999977 4999999999999999999999999999
Q ss_pred chhHHHHHHHcCCceeeeeeecccchhhhhcCccccccccchHHHHHHhhcccccccccccccccccccccC--ccCCCC
Q 004396 602 QQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFP--GLLPKV 679 (756)
Q Consensus 602 ~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p--g~~p~~ 679 (756)
|+||+|||.++|+++||++.+||+|+|+.+.+..+ ..+..++.+.++..+-.+.+-. ++.++.+ |++|-
T Consensus 206 RkGFVklAl~tGs~LVP~~sFGE~di~~q~~np~~-s~lr~~Q~~~k~~~gf~~~~f~-------grg~~~~~~gllP~- 276 (334)
T KOG0831|consen 206 RKGFVKLALQTGASLVPVFSFGENDVYKQVENPKG-SRLRKFQEWFKKIFGFTPPIFY-------GRGFFQYTFGLLPF- 276 (334)
T ss_pred cccHHHHHHHhCCCcCceeecccceeeeeecCCCc-chhHHHHHHHHHhcCcccceEe-------cccccccccccccc-
Confidence 99999999999999999999999999988876554 2333466666665554444432 2233333 66664
Q ss_pred CceEEEEeCCcccCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 004396 680 PGRFYYLFGKPIQTKGREVSLKDKENANELYLHIKSQVERCLDYLLKKREED 731 (756)
Q Consensus 680 p~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~v~~~v~~~~~~l~~~r~~~ 731 (756)
..++.++||+||+++. .+.+++|.++++++++.+++++++++.+.++..+
T Consensus 277 r~pi~~VVG~Pi~v~k--~~~Pt~e~id~~H~~y~~~L~~LF~~hK~k~g~~ 326 (334)
T KOG0831|consen 277 RRPITTVVGEPIPVPK--TENPTQEQIDKYHGLYIDALRKLFDEHKTKYGVP 326 (334)
T ss_pred cCcceeEecCccCCcc--CcCCCHHHHHHHHHHHHHHHHHHHHhhccccCCC
Confidence 6889999999999986 4668999999999999999999999999887544
|
|
| >cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-19 Score=172.01 Aligned_cols=116 Identities=15% Similarity=0.188 Sum_probs=94.0
Q ss_pred cCcEEecccCCCC-CCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCcccc
Q 004396 484 DGKIVKGLAGVPN-EGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPV 562 (756)
Q Consensus 484 ~~~~v~g~~~lp~-~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v 562 (756)
.|++++| ++|. ++|+|+|+||+++ +|.+++...+.. .++.++++++..+|+. |+ +++++.+|++||
T Consensus 8 ~g~~~~g--~~p~~~~~~iiv~NH~S~-~D~~~l~~~~~~-~~~~~~~vak~~l~~~--------p~-g~~~~~~g~i~V 74 (163)
T cd07988 8 SGWRIEG--EPPNKPKFVVIGAPHTSN-WDFVLGLLAAFA-LGLKISFLGKHSLFKP--------PL-GPFMRWLGGIPV 74 (163)
T ss_pred cCEEEEe--EcCCCCceEEEEECCCcc-HHHHHHHHHHHh-cCCceEEEEEHHhhhC--------cH-HHHHHHcCCEEe
Confidence 4667776 3776 4799999999988 799887765432 4578899999999987 56 889999999999
Q ss_pred CHHh-------HHHHhcCC--CeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeee
Q 004396 563 AARN-------LFKLLSTK--SHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 563 ~~~~-------~~~~l~~g--~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
+|++ +.+.|++| .+|+|||||+|+.. -++|+|++++|.++|+||+||++.
T Consensus 75 ~r~~~~~~~~~~~~~l~~g~~~~l~IFPEGtR~~~----------~~fk~G~~~lA~~~~~PIvPv~i~ 133 (163)
T cd07988 75 DRSRAGGLVEQVVEEFRRREEFVLAIAPEGTRSKV----------DKWKTGFYHIARGAGVPILLVYLD 133 (163)
T ss_pred EcCCcccHHHHHHHHHHhCCCcEEEEeCCCCCCCC----------cChhhHHHHHHHHcCCCEEEEEEe
Confidence 9853 44566665 47999999998641 167999999999999999999994
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins. |
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.5e-18 Score=163.55 Aligned_cols=211 Identities=19% Similarity=0.226 Sum_probs=148.2
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
+..|||+||+.|+....+.+.+.| .+||.|+++.+||||.. +.+||.+++.+..+++... +...|.++|-|
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEeec
Confidence 467999999999999999999999 67999999999999965 7999999999999998732 34589999999
Q ss_pred hhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCc-hhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHH
Q 004396 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL-FPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (756)
Q Consensus 251 ~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (756)
|||.+|+.+|.++| ++++|.++++... ..+... ..++..+ .+ +.... ...
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~--k~~~~iie~~l~y~--------~~-~kk~e-------------~k~--- 144 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNV--KSWRIIIEGLLEYF--------RN-AKKYE-------------GKD--- 144 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCccc--ccchhhhHHHHHHH--------HH-hhhcc-------------CCC---
Confidence 99999999999998 8899999886632 111111 1111111 00 00000 000
Q ss_pred HHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC--
Q 004396 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-- 407 (756)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~-- 407 (756)
.+.+.+.+..+ .++....+..+......+...+..|..|++++.|++|+++|.+. ++.+.+...
T Consensus 145 -~e~~~~e~~~~------------~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~s-A~~Iy~~v~s~ 210 (243)
T COG1647 145 -QEQIDKEMKSY------------KDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAES-ANFIYDHVESD 210 (243)
T ss_pred -HHHHHHHHHHh------------hcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHH-HHHHHHhccCC
Confidence 11111111110 00111222233334444557889999999999999999999995 999888774
Q ss_pred CeEEEEEcCCCCcccccch-hhHHHHh
Q 004396 408 NCIVRNFKDNGHTLLLEEG-ISLLTII 433 (756)
Q Consensus 408 ~~~l~~i~~aGH~~~~e~p-~~~~~~I 433 (756)
..++.+++++||.+..+.. +.+.+.+
T Consensus 211 ~KeL~~~e~SgHVIt~D~Erd~v~e~V 237 (243)
T COG1647 211 DKELKWLEGSGHVITLDKERDQVEEDV 237 (243)
T ss_pred cceeEEEccCCceeecchhHHHHHHHH
Confidence 6799999999999988755 4444444
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=4e-18 Score=174.53 Aligned_cols=243 Identities=18% Similarity=0.192 Sum_probs=158.3
Q ss_pred CCCCEEEEECCCCCchhhHHHhHhhhcC--CcEEEEeccCCCCCC------ChhHHHHHHHHHHHHhhccCCCCCEEEEE
Q 004396 177 KGSPTLLFLPGIDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~--gy~Vi~~Dl~G~G~S------s~~~~a~dv~~~i~~l~~~~~~~~v~LvG 248 (756)
...|+++++||+.+++..|+.+...|++ +-.|+++|.|.||.| +.+++++|+..+|+.........+++|+|
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~G 129 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLG 129 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceecc
Confidence 3589999999999999999999999954 468999999999999 58999999999999976544456999999
Q ss_pred eChhh-HHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHh---hchhH------HHHhHHhHhhhhcCChhHHHH
Q 004396 249 DSFGG-CLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILK---AMPDE------LHCAVPYLLSYVMGDPIKMAM 318 (756)
Q Consensus 249 hS~GG-~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~~ 318 (756)
||||| .+++..+..+|+.+..+|+++-+.............+.. ..+.. .....+.+.. .
T Consensus 130 HsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~-~--------- 199 (315)
T KOG2382|consen 130 HSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIE-V--------- 199 (315)
T ss_pred cCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHH-H---------
Confidence 99999 888888889999999999987655311111111111111 11100 0000001000 0
Q ss_pred HhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhc--cCCCCcEEEEEeCCCCCCCCH
Q 004396 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL--HAVKAEVLVLASGKDNMLPSE 396 (756)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~PvLvI~G~~D~~vp~~ 396 (756)
.......+.+...+.. ...-....-..+.+.+...+..+. .......+ .....|||+++|.++.+++.+
T Consensus 200 ------~~d~~~~~fi~~nl~~-~~~~~s~~w~~nl~~i~~~~~~~~--~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~ 270 (315)
T KOG2382|consen 200 ------GFDNLVRQFILTNLKK-SPSDGSFLWRVNLDSIASLLDEYE--ILSYWADLEDGPYTGPVLFIKGLQSKFVPDE 270 (315)
T ss_pred ------hcchHHHHHHHHhcCc-CCCCCceEEEeCHHHHHHHHHHHH--hhcccccccccccccceeEEecCCCCCcChh
Confidence 0000001111111110 000001111122233332222211 01111222 566789999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 397 DEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 397 ~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
. -.++.+.+|+++++.++++||++|.|+|+++.+.|.+ |+.+
T Consensus 271 ~-~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~--Fl~~ 312 (315)
T KOG2382|consen 271 H-YPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISE--FLEE 312 (315)
T ss_pred H-HHHHHHhccchheeecccCCceeecCCHHHHHHHHHH--Hhcc
Confidence 5 8999999999999999999999999999999999986 6544
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.1e-18 Score=183.12 Aligned_cols=251 Identities=15% Similarity=0.122 Sum_probs=146.4
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchh-hH-------------------------HHhHhhh-cCCcEEE
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GL-------------------------ILHHKPL-GKAFEVR 209 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~-~~-------------------------~~~~~~L-~~gy~Vi 209 (756)
...||..+++..+... . .+.+|+++||+++... .| ..+++.| .+||.|+
T Consensus 3 ~~~~g~~l~~~~~~~~-~---~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~ 78 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVK-N---AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVY 78 (332)
T ss_pred cCCCCCeEEEeeeecc-C---CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEE
Confidence 3456666444443322 2 2558999999988885 21 3467888 7799999
Q ss_pred EeccCCCCCC-----------ChhHHHHHHHHHHHHhhc-------------------cCC-CCCEEEEEeChhhHHHHH
Q 004396 210 CLHIPVYDRT-----------PFEGLVKFVEETVRREHA-------------------SSP-EKPIYLVGDSFGGCLALA 258 (756)
Q Consensus 210 ~~Dl~G~G~S-----------s~~~~a~dv~~~i~~l~~-------------------~~~-~~~v~LvGhS~GG~vAl~ 258 (756)
++|+||||+| +++++++|+..+++.... .++ +.|++|+||||||.+++.
T Consensus 79 ~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 79 GLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred EecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 9999999987 377888999999987653 234 578999999999999999
Q ss_pred HHHhCCC--------cceEEEEeCCCCcCCcCCcC---CchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCCh
Q 004396 259 VAARNPT--------IDLILILSNPATSFGRSQLQ---PLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (756)
Q Consensus 259 ~A~~~P~--------~v~~lVLi~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (756)
++.++++ .++|+|+++|+......... ........+...+....+.+ ...... .. ... +
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~---~~~~~~-----~~-~~~-~ 228 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTF---RISKKI-----RY-EKS-P 228 (332)
T ss_pred HHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcc---cccCcc-----cc-ccC-h
Confidence 9876542 58999999987643211100 00000000000000000100 000000 00 000 0
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCC--CCcEEEEEeCCCCCCCCHHHHHHHHHh
Q 004396 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAV--KAEVLVLASGKDNMLPSEDEAKRLNNS 405 (756)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~PvLvI~G~~D~~vp~~~~~~~l~~~ 405 (756)
...+.... .+.. . ...-+..+...++... ......+..+ ++|+|+++|++|.+++++. ++.+.+.
T Consensus 229 -~~~~~~~~-----Dp~~---~--~~~~s~~~~~~l~~~~-~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~-~~~~~~~ 295 (332)
T TIGR01607 229 -YVNDIIKF-----DKFR---Y--DGGITFNLASELIKAT-DTLDCDIDYIPKDIPILFIHSKGDCVCSYEG-TVSFYNK 295 (332)
T ss_pred -hhhhHHhc-----Cccc---c--CCcccHHHHHHHHHHH-HHHHhhHhhCCCCCCEEEEEeCCCCccCHHH-HHHHHHh
Confidence 00000000 0000 0 0111222222222211 1122344555 7999999999999999985 8888766
Q ss_pred C--CCeEEEEEcCCCCcccccc-hhhHHHHhh
Q 004396 406 L--QNCIVRNFKDNGHTLLLEE-GISLLTIIK 434 (756)
Q Consensus 406 l--~~~~l~~i~~aGH~~~~e~-p~~~~~~I~ 434 (756)
. ++++++++++++|.++.|. .+++.+.|.
T Consensus 296 ~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~ 327 (332)
T TIGR01607 296 LSISNKELHTLEDMDHVITIEPGNEEVLKKII 327 (332)
T ss_pred ccCCCcEEEEECCCCCCCccCCCHHHHHHHHH
Confidence 5 5789999999999999985 455655554
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.6e-18 Score=200.58 Aligned_cols=265 Identities=13% Similarity=0.092 Sum_probs=147.5
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC---------ChhHHHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT---------PFEGLVKF 227 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S---------s~~~~a~d 227 (756)
...||.. ++|...|.+ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|
T Consensus 8 ~~~~g~~---l~~~~~g~~--~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~d 82 (582)
T PRK05855 8 VSSDGVR---LAVYEWGDP--DRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADD 82 (582)
T ss_pred EeeCCEE---EEEEEcCCC--CCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHH
Confidence 3445655 456566652 478999999999999999999999988999999999999988 37889999
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC--CCcceEEEEeCCCCcCCcCCcCC--chh-HHhhchhHHHHhH
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPATSFGRSQLQP--LFP-ILKAMPDELHCAV 302 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~--P~~v~~lVLi~p~~~~~~~~~~~--~~~-~~~~~~~~~~~~~ 302 (756)
+.++++.+... ++++|+||||||.+++.++.+. ++.+..++.+++........+.. ... .............
T Consensus 83 l~~~i~~l~~~---~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (582)
T PRK05855 83 FAAVIDAVSPD---RPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLL 159 (582)
T ss_pred HHHHHHHhCCC---CcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHh
Confidence 99999986533 3699999999999998887762 34444444444321000000000 000 0000000000000
Q ss_pred HhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH--HHHHhhhccCCCC
Q 004396 303 PYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA--SAYANSRLHAVKA 380 (756)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~ 380 (756)
..+.......+.. ......... . ...................... .. +........+... .......+..+++
T Consensus 160 ~~~~~~~~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (582)
T PRK05855 160 RSWYIYLFHLPVL-PELLWRLGL-G-RAWPRLLRRVEGTPVDPIPTQT-TL-SDGAHGVKLYRANMIRSLSRPRERYTDV 234 (582)
T ss_pred hhHHHHHHhCCCC-cHHHhccch-h-hHHHHhhhhccCCCcchhhhhh-hh-ccccchHHHHHhhhhhhhccCccCCccC
Confidence 0000000000000 000000000 0 0000000000000000000000 00 0000000111100 0111233556899
Q ss_pred cEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhc
Q 004396 381 EVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (756)
Q Consensus 381 PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (756)
|+|+|+|++|.+++... .+.+.+.+++.++++++ +||++++|+|+.+++.|.+.
T Consensus 235 P~lii~G~~D~~v~~~~-~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~f 288 (582)
T PRK05855 235 PVQLIVPTGDPYVRPAL-YDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEF 288 (582)
T ss_pred ceEEEEeCCCcccCHHH-hccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHH
Confidence 99999999999999985 88888888898988886 69999999999999999843
|
|
| >COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.4e-18 Score=179.02 Aligned_cols=128 Identities=27% Similarity=0.407 Sum_probs=106.4
Q ss_pred ccCcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCcccc
Q 004396 483 EDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPV 562 (756)
Q Consensus 483 ~~~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v 562 (756)
..+++|+|.||+|+++|+|+|+||+++ +|.+++...+.... .++++++..+|+. |+++++++.+|++++
T Consensus 49 ~~r~~v~G~e~lp~~~~~ivvaNH~S~-~D~~~l~~~~~~~~--~~~f~~k~~l~~~--------p~~g~~~~~~~~i~v 117 (255)
T COG0204 49 GLRVEVEGLENLPKGGPALVVANHQSF-LDPLLLSLALPRRG--PVRFVAKKELFKV--------PLLGWLLRLLGAIPV 117 (255)
T ss_pred CceEEEEeeecCCCCCCEEEEECchhh-hhHHHHhhhcCCCc--ceEEEeehhhccC--------chHHHHHHHcCeeEe
Confidence 357889999999998999999999986 79988887753222 6999999999987 589999999999999
Q ss_pred CHHh---------HHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccch
Q 004396 563 AARN---------LFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDI 627 (756)
Q Consensus 563 ~~~~---------~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~ 627 (756)
+|.+ +..+++.|..++|||||||... .....++++|++++|.++++||||+.+.|..+.
T Consensus 118 ~r~~~~~~~~~~~~~~~~~~g~~l~iFPEGtr~~~------~~~~~~~k~g~~~~a~~~~~PivPv~i~g~~~~ 185 (255)
T COG0204 118 DRENPDDETLRAAVARLKAGGRSLVIFPEGTRSRG------GEELLPFKRGAARLALEAGVPIVPVAIVGAEEL 185 (255)
T ss_pred cCCCCcHHHHHHHHHHHHhCCcEEEECCCcCcCCC------ccccCCCcchHHHHHHHcCCCEEeEEEeCCccc
Confidence 9964 3344444799999999999542 111238899999999999999999999988777
|
|
| >cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.6e-18 Score=169.62 Aligned_cols=190 Identities=14% Similarity=0.100 Sum_probs=131.0
Q ss_pred ccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCHHh----
Q 004396 491 LAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARN---- 566 (756)
Q Consensus 491 ~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~~~---- 566 (756)
.||||.++++|+++||++. +|..++...+. +..+++|+.++|..... ....|+.+++++..|++||.|+.
T Consensus 15 ~e~ip~~~~vIl~sNH~S~-~Dp~ii~~~~~----r~~~~lAk~~lf~ag~~-~~~~pl~~~f~~~~~~~pV~r~k~~~~ 88 (235)
T cd07985 15 EEQLAQGHNVVLLANHQTE-ADPAVISLLLE----KTHPYLAENMIYVAGDR-VVSDPLCKPFSMGRNLLCVHSKKHIDD 88 (235)
T ss_pred HHhccCCCCEEEEECCccc-ccHHHHHHHhc----cccHHHhhhhheecccc-ccccHhHHHHHhhCCceeeecCccccc
Confidence 5899999999999999987 69988887753 55689999999943211 11237899999999999997753
Q ss_pred ------------------HHHHhcCCCe-EEEEeCcchhccccCCcceeEEcCCc----hhHHHHHHHcCCc--eeeeee
Q 004396 567 ------------------LFKLLSTKSH-VLLYPGGAREALHYKGEEYKLFWPEQ----QEFVRMAARFGAT--IVPFGA 621 (756)
Q Consensus 567 ------------------~~~~l~~g~~-v~ifPeG~re~~~~~~~~~~l~~~~~----~gf~rlA~~~g~~--IVPv~~ 621 (756)
+.++|++|.. |.|||||+|+.....++ .+.- +|. .+|.+||.++|+| |+|+++
T Consensus 89 ~P~~~~~k~~~~~~alk~~~~lLk~G~~~i~IfPEGtR~r~~~~g~-~~p~-~Fd~~~~~~~~~La~~s~~p~hi~Plai 166 (235)
T cd07985 89 PPELKEEKMKANLATLKEMQQLLNEGGQLIWVAPSGGRDRPDANGE-WYPD-PFDPSAVEMMRLLAQKSRVPTHLYPMAL 166 (235)
T ss_pred chhhhhhhhhccHHHHHHHHHHHHcCCeEEEEcCCCCCCCCCCCCC-ccCC-ccchHHHHHHHHHHHhcCCCceEEeeEE
Confidence 5568899877 78999999976544322 1111 233 4588999999999 999999
Q ss_pred ecccchhhhhcCccccccccchHHHHHHhhcccccccccccccccccccccCccCCCCCceEEEEeCCcccCCCCCCcCC
Q 004396 622 VGEDDIADLVLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLK 701 (756)
Q Consensus 622 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~~p~~p~~~~~~~G~PI~~~~~~~~~~ 701 (756)
. ..|+++--.. +.+.++. -| .. .+.++.+.||+||+..+......
T Consensus 167 ~-~ydi~Ppp~~------------v~~~ige----~r-----------------~~-~f~~v~i~vg~~i~~~~~~~~~~ 211 (235)
T cd07985 167 L-TYDIMPPPKQ------------VEKEIGE----KR-----------------AV-AFTGVGLAVGEEIDFSAIAATHK 211 (235)
T ss_pred E-eecccCCCcc------------ccccccc----cc-----------------cc-cccceEEEecCCccchhhhcccC
Confidence 8 4444211000 0000000 00 11 25789999999999986532223
Q ss_pred -CHHHHHHHHHHHHHHHHHHHHH
Q 004396 702 -DKENANELYLHIKSQVERCLDY 723 (756)
Q Consensus 702 -~~~~~~~l~~~v~~~v~~~~~~ 723 (756)
.++..+++.+++.++|.++++.
T Consensus 212 d~~e~~~~~~~~i~~~v~~~y~~ 234 (235)
T cd07985 212 DPEEVREAFSKAAFDSVKRLYNV 234 (235)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhc
Confidence 3677778888888888877653
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). |
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.6e-17 Score=177.41 Aligned_cols=230 Identities=12% Similarity=0.111 Sum_probs=133.0
Q ss_pred CCCEEEEECCCCCchhh--HHHhHhhh-cCCcEEEEeccCCCCCCCh-------hHHHHHHHHHHHHhhccCCCCCEEEE
Q 004396 178 GSPTLLFLPGIDGLGLG--LILHHKPL-GKAFEVRCLHIPVYDRTPF-------EGLVKFVEETVRREHASSPEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~--~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~-------~~~a~dv~~~i~~l~~~~~~~~v~Lv 247 (756)
++|+||++||++++... +..+++.| .+||+|+++|+||||.+.. ....+|+..+++.+....+..+++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~v 136 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAV 136 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEE
Confidence 47899999999877443 45577777 7799999999999997731 23467777777777665566789999
Q ss_pred EeChhhHHHHHHHHhCCCc--ceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcC-
Q 004396 248 GDSFGGCLALAVAARNPTI--DLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENR- 324 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~~--v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 324 (756)
||||||.+++.+++++++. +.++|+++++....... ..+...........+...+... ...........
T Consensus 137 G~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~~~ 208 (324)
T PRK10985 137 GYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACS----YRMEQGFSRVYQRYLLNLLKAN----AARKLAAYPGTL 208 (324)
T ss_pred EecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHH----HHHhhhHHHHHHHHHHHHHHHH----HHHHHHhccccc
Confidence 9999999988888887643 88888888765321100 0000000000000000000000 00000000000
Q ss_pred -CChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHH
Q 004396 325 -LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLN 403 (756)
Q Consensus 325 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~ 403 (756)
... +.... ...+..+..... .+...+......+.... ....+.++++|+++|+|++|++++.+. .+.+.
T Consensus 209 ~~~~-~~~~~-~~~~~~fd~~~~-----~~~~g~~~~~~~y~~~~--~~~~l~~i~~P~lii~g~~D~~~~~~~-~~~~~ 278 (324)
T PRK10985 209 PINL-AQLKS-VRRLREFDDLIT-----ARIHGFADAIDYYRQCS--ALPLLNQIRKPTLIIHAKDDPFMTHEV-IPKPE 278 (324)
T ss_pred cCCH-HHHhc-CCcHHHHhhhhe-----eccCCCCCHHHHHHHCC--hHHHHhCCCCCEEEEecCCCCCCChhh-ChHHH
Confidence 000 00000 000000000000 00001111111121111 236678999999999999999999884 77777
Q ss_pred HhCCCeEEEEEcCCCCcccccc
Q 004396 404 NSLQNCIVRNFKDNGHTLLLEE 425 (756)
Q Consensus 404 ~~l~~~~l~~i~~aGH~~~~e~ 425 (756)
+..+++++++++++||+.++|.
T Consensus 279 ~~~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 279 SLPPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred HhCCCeEEEECCCCCceeeCCC
Confidence 7888999999999999999886
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.3e-17 Score=167.90 Aligned_cols=259 Identities=13% Similarity=0.076 Sum_probs=156.5
Q ss_pred cccccCCCCCce-eeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCC-CCC-------ChhH
Q 004396 154 KEIIKPDGGPPR-WFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVY-DRT-------PFEG 223 (756)
Q Consensus 154 ~~~~~~dg~~~~-~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~-G~S-------s~~~ 223 (756)
.-+...||..++ |+.+-+... .+..++||+.||+++....+..+++.| .+||.|+.+|++|| |.| ++..
T Consensus 12 ~~~~~~dG~~L~Gwl~~P~~~~-~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~ 90 (307)
T PRK13604 12 HVICLENGQSIRVWETLPKENS-PKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSI 90 (307)
T ss_pred heEEcCCCCEEEEEEEcCcccC-CCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccc
Confidence 344556666643 444432111 234689999999999887899999999 78999999999988 887 2344
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHH
Q 004396 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303 (756)
Q Consensus 224 ~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (756)
..+|+.++++.+... ...++.|+||||||.+|+.+|... .++++|+.+|..... ..+.. .+.
T Consensus 91 g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~--------d~l~~-------~~~ 152 (307)
T PRK13604 91 GKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLR--------DTLER-------ALG 152 (307)
T ss_pred cHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHH--------HHHHH-------hhh
Confidence 578888888887654 345899999999999997777643 389999999866321 01110 000
Q ss_pred hHhhh--hcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCc
Q 004396 304 YLLSY--VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAE 381 (756)
Q Consensus 304 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 381 (756)
..+.. ....+... .+ ..... ....+...... ... . ......+.+.+++.|
T Consensus 153 ~~~~~~p~~~lp~~~---d~-~g~~l--~~~~f~~~~~~-----------~~~---------~--~~~s~i~~~~~l~~P 204 (307)
T PRK13604 153 YDYLSLPIDELPEDL---DF-EGHNL--GSEVFVTDCFK-----------HGW---------D--TLDSTINKMKGLDIP 204 (307)
T ss_pred cccccCccccccccc---cc-ccccc--cHHHHHHHHHh-----------cCc---------c--ccccHHHHHhhcCCC
Confidence 00000 00000000 00 00000 00000000000 000 0 000112445667899
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhCC--CeEEEEEcCCCCcccccch---hhHHHHhhhccccccCcCcccccccCCCCH
Q 004396 382 VLVLASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEG---ISLLTIIKGTCKYRRSRKLDSVADFLPPSR 456 (756)
Q Consensus 382 vLvI~G~~D~~vp~~~~~~~l~~~l~--~~~l~~i~~aGH~~~~e~p---~~~~~~I~~~~f~rr~~~~~~v~d~~pPs~ 456 (756)
+|+|||++|.++|.+. ++++.+.++ +++++.++|++|.+.. +. ..+-+-+.++..--.+...|...++..|+.
T Consensus 205 vLiIHG~~D~lVp~~~-s~~l~e~~~s~~kkl~~i~Ga~H~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (307)
T PRK13604 205 FIAFTANNDSWVKQSE-VIDLLDSIRSEQCKLYSLIGSSHDLGE-NLVVLRNFYQSVTKAAIALDNGSLDLDVDIIEPSF 282 (307)
T ss_pred EEEEEcCCCCccCHHH-HHHHHHHhccCCcEEEEeCCCccccCc-chHHHHHHHHHHHHHHheecCCcccccccccCCCH
Confidence 9999999999999995 999998775 7999999999998763 32 223333333322223445566778888988
Q ss_pred HHHHH
Q 004396 457 QEFKY 461 (756)
Q Consensus 457 ~e~~~ 461 (756)
+++-.
T Consensus 283 ~~~~~ 287 (307)
T PRK13604 283 EDLTS 287 (307)
T ss_pred HHHHH
Confidence 76644
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.4e-17 Score=178.11 Aligned_cols=268 Identities=14% Similarity=0.079 Sum_probs=162.3
Q ss_pred ccccCCCCCc--eeeeeccCCCCC-CCCCEEEEECCCCCchhh-------------HHHhH---hhh-cCCcEEEEeccC
Q 004396 155 EIIKPDGGPP--RWFCPVDCGRPL-KGSPTLLFLPGIDGLGLG-------------LILHH---KPL-GKAFEVRCLHIP 214 (756)
Q Consensus 155 ~~~~~dg~~~--~~~~~~~~G~~~-~~~p~lV~lHG~~~s~~~-------------~~~~~---~~L-~~gy~Vi~~Dl~ 214 (756)
.+....|..+ .-++|...|..+ .+.++||++|++.++... |..++ ..| .+.|.|+|+|..
T Consensus 29 ~f~l~~G~~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~l 108 (389)
T PRK06765 29 EFTTEGGRTIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTL 108 (389)
T ss_pred CEEccCCCCcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEeccc
Confidence 3444455443 346788888753 345899999999886522 55454 345 467999999998
Q ss_pred CCCC--------------------C--------ChhHHHHHHHHHHHHhhccCCCCCEE-EEEeChhhHHHHHHHHhCCC
Q 004396 215 VYDR--------------------T--------PFEGLVKFVEETVRREHASSPEKPIY-LVGDSFGGCLALAVAARNPT 265 (756)
Q Consensus 215 G~G~--------------------S--------s~~~~a~dv~~~i~~l~~~~~~~~v~-LvGhS~GG~vAl~~A~~~P~ 265 (756)
|-|. + +++++++++..++++++.. ++. ++||||||++|+.+|.++|+
T Consensus 109 G~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~----~~~~vvG~SmGG~ial~~a~~~P~ 184 (389)
T PRK06765 109 CNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA----RLHAVMGPSMGGMQAQEWAVHYPH 184 (389)
T ss_pred CCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC----CceEEEEECHHHHHHHHHHHHChH
Confidence 7642 1 4889999999999987765 775 99999999999999999999
Q ss_pred cceEEEEeCCCCcCCcCCcCCchh----HHhhchhH------------HH-HhHHhHhhhhcCChhHHHHHhhhcC----
Q 004396 266 IDLILILSNPATSFGRSQLQPLFP----ILKAMPDE------------LH-CAVPYLLSYVMGDPIKMAMVNIENR---- 324 (756)
Q Consensus 266 ~v~~lVLi~p~~~~~~~~~~~~~~----~~~~~~~~------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~---- 324 (756)
+++++|++++.............. .+..-+.+ .. .............+..+ ...+.+.
T Consensus 185 ~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~-~~~f~r~~~~~ 263 (389)
T PRK06765 185 MVERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFY-ETTFPRNASIE 263 (389)
T ss_pred hhheEEEEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHH-HHHcCcCcccc
Confidence 999999998755321110000100 00000000 00 00000000000000000 0000000
Q ss_pred C------ChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHH-----HHhhhccCCCCcEEEEEeCCCCCC
Q 004396 325 L------PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASA-----YANSRLHAVKAEVLVLASGKDNML 393 (756)
Q Consensus 325 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i~~PvLvI~G~~D~~v 393 (756)
. ......+.+.+ .........+....+....+.+..... +..+.+.++++|+|+|+|++|.++
T Consensus 264 ~~~~~~~~~~~~~e~yl~------~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~ 337 (389)
T PRK06765 264 VDPYEKVSTLTSFEKEIN------KATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQ 337 (389)
T ss_pred ccccccccchhhHHHHHH------HHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCC
Confidence 0 00000000000 000112223344444444444433321 234678899999999999999999
Q ss_pred CCHHHHHHHHHhCC----CeEEEEEcC-CCCcccccchhhHHHHhh
Q 004396 394 PSEDEAKRLNNSLQ----NCIVRNFKD-NGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 394 p~~~~~~~l~~~l~----~~~l~~i~~-aGH~~~~e~p~~~~~~I~ 434 (756)
|++. .+.+.+.++ +++++++++ +||+.++|+|+.+++.|.
T Consensus 338 p~~~-~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~ 382 (389)
T PRK06765 338 PPRY-NYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIY 382 (389)
T ss_pred CHHH-HHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHH
Confidence 9985 888888886 689999985 999999999999999998
|
|
| >PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-17 Score=198.51 Aligned_cols=122 Identities=18% Similarity=0.156 Sum_probs=103.9
Q ss_pred CcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCH
Q 004396 485 GKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAA 564 (756)
Q Consensus 485 ~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~ 564 (756)
+++++|.||+|++||+|+|+||+++ +|.+++...+ .+.+.++++..+++. |+++++++..|++|++|
T Consensus 15 ~~~v~g~~~~~~~~~~i~v~NH~s~-~D~~~l~~~~----~~~~~~~~k~~l~~~--------~~~~~~~~~~~~i~v~r 81 (718)
T PRK08043 15 RVRVTGDTQALKGERVLITPNHVSF-LDGILLALFL----PVRPVFAVYTSISQQ--------WYMRWLKPYIDFVPLDP 81 (718)
T ss_pred EEEEEccccCCCCCCEEEEECCCch-HHHHHHHHhC----CCCeEEEEeHHHhhh--------HHHHHHHHhCCEEEecC
Confidence 6789999999999999999999987 7998888763 335667888888876 68899999999999998
Q ss_pred Hh------HHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccc
Q 004396 565 RN------LFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDD 626 (756)
Q Consensus 565 ~~------~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~ 626 (756)
.+ +.+.|++|..|+|||||+|+. ++ + ..++|+|++++|.++|+|||||++.|.+.
T Consensus 82 ~~~~~~~~~~~~l~~g~~~~iFPEGtr~~----~~--~-~~~~k~G~~~~a~~~~~pivPv~i~g~~~ 142 (718)
T PRK08043 82 TKPMAIKHLVRLVEQGRPVVIFPEGRITV----TG--S-LMKIYDGAGFVAAKSGATVIPVRIEGAEL 142 (718)
T ss_pred CCHHHHHHHHHHHhCCCEEEEeCCCccCC----CC--C-ccCcchHHHHHHHHCCCCEEEEEEECCcc
Confidence 65 667899999999999999952 22 2 23899999999999999999999998754
|
|
| >cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-17 Score=166.96 Aligned_cols=176 Identities=16% Similarity=0.191 Sum_probs=121.9
Q ss_pred cCcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccC
Q 004396 484 DGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVA 563 (756)
Q Consensus 484 ~~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~ 563 (756)
..++++|.+|+| ++|+|+|+||+++ +|.+++... ...+++++..+++. |+++++++.+|+++|+
T Consensus 11 ~~~~v~g~~~~p-~~~~iiv~NH~S~-~D~~~l~~~------~~~~fv~k~el~~~--------p~~g~~~~~~g~i~v~ 74 (211)
T cd07991 11 YVIKVHGKPDPP-EAPRIIVANHTSF-IDPLILFSD------LFPSIVAKKELGKL--------PFIGTILRALGCIFVD 74 (211)
T ss_pred EEEEEECCCCCC-CCCeEEEECCCcH-HHHHHHhhh------cCcEEEEehhhccC--------cHHHHHHHhCCceEEe
Confidence 467899999999 6899999999987 699887765 45678899888876 6899999999999998
Q ss_pred HHh----------HHHHhc--CCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhhhh
Q 004396 564 ARN----------LFKLLS--TKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLV 631 (756)
Q Consensus 564 ~~~----------~~~~l~--~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~ 631 (756)
|++ +.+.++ +|..|+|||||+|+. ++ .+. ++++|++ ++++||+||++.|.+......
T Consensus 75 R~~~~~~~~~~~~~~~~~~~~~g~~v~iFPEGtrs~----~~--~l~-~Fk~gaf----~~~~pI~Pv~i~~~~~~~~~~ 143 (211)
T cd07991 75 RSEPKDRKKVVEEIKERATDPNWPPILIFPEGTTTN----GK--ALI-MFKKGAF----EPGVPVQPVAIRYPNKFVDAF 143 (211)
T ss_pred CCCchhHHHHHHHHHHHHhCCCCCeEEEecCccccC----CC--EEE-eeccccc----cCCCeeEEEEEEecCccCCcc
Confidence 854 234556 469999999999852 22 344 8899975 489999999998876532211
Q ss_pred cCccccccccchHHHHHHhhcccccccccccccccccccccCccCCCCCceEEEEeCCcccCCCCCCcCCCHHHHHHHHH
Q 004396 632 LDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENANELYL 711 (756)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~~p~~p~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~ 711 (756)
....+.. .+..+++ ++...++++.+.||+||+++ . +.++.+++.+
T Consensus 144 ~~~~~~~---~~~~l~~--------------------------~l~~~~~~v~v~~l~pi~~~-~-----~~~~~~~l~~ 188 (211)
T cd07991 144 WNSSGYS---SLMYLFR--------------------------LLTQPANVLEVEFLPVYTPS-E-----EGEDPKEFAN 188 (211)
T ss_pred cCCCCcc---HHHHHHH--------------------------HhCCcceEEEEEECCCcccc-c-----CCCCHHHHHH
Confidence 1111000 0011111 12223789999999999984 2 1133455666
Q ss_pred HHHHHHHHHH
Q 004396 712 HIKSQVERCL 721 (756)
Q Consensus 712 ~v~~~v~~~~ 721 (756)
+++++|.+.+
T Consensus 189 ~v~~~i~~~l 198 (211)
T cd07991 189 RVRLIMANKL 198 (211)
T ss_pred HHHHHHHHhc
Confidence 6666666543
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences. |
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.1e-17 Score=164.13 Aligned_cols=212 Identities=19% Similarity=0.204 Sum_probs=124.8
Q ss_pred cEEEEeccCCCCCCC-----------hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeC
Q 004396 206 FEVRCLHIPVYDRTP-----------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSN 274 (756)
Q Consensus 206 y~Vi~~Dl~G~G~Ss-----------~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~ 274 (756)
|+|+++|+||+|.|+ .+++++++..+++.++.+ +++++||||||.+++.+|+.+|++|+++|+++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~ 76 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK----KINLVGHSMGGMLALEYAAQYPERVKKLVLIS 76 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS----SEEEEEETHHHHHHHHHHHHSGGGEEEEEEES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC----CeEEEEECCChHHHHHHHHHCchhhcCcEEEe
Confidence 789999999999885 567888888888887665 79999999999999999999999999999999
Q ss_pred CCC----cCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhc
Q 004396 275 PAT----SFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSD 350 (756)
Q Consensus 275 p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (756)
++. ......+.. ............................. ...... ........... ......
T Consensus 77 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~-----~~~~~~ 144 (230)
T PF00561_consen 77 PPPDLPDGLWNRIWPR-GNLQGQLLDNFFNFLSDPIKPLLGRWPKQ-FFAYDR-----EFVEDFLKQFQ-----SQQYAR 144 (230)
T ss_dssp ESSHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-----HHHHTHHHHHH-----HHHHHH
T ss_pred eeccchhhhhHHHHhh-hhhhhhHHHhhhccccccchhhhhhhhhh-eeeccC-----ccccchhhccc-----hhhhhH
Confidence 852 000000000 00000000000000000000000000000 000000 00000000000 000000
Q ss_pred cCChhhHHHHH--HHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhh
Q 004396 351 IIPKDTLLWKL--KLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGIS 428 (756)
Q Consensus 351 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~ 428 (756)
........... .............+.++++|+|+++|++|.++|++. ...+.+.+|+.++++++++||+.++++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~-~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~ 223 (230)
T PF00561_consen 145 FAETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPES-SEQLAKLIPNSQLVLIEGSGHFAFLEGPDE 223 (230)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHH-HHHHHHHSTTEEEEEETTCCSTHHHHSHHH
T ss_pred HHHHHHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHH-HHHHHHhcCCCEEEECCCCChHHHhcCHHh
Confidence 00000000000 011111222236678899999999999999999995 888999999999999999999999999999
Q ss_pred HHHHhh
Q 004396 429 LLTIIK 434 (756)
Q Consensus 429 ~~~~I~ 434 (756)
+++.|.
T Consensus 224 ~~~~i~ 229 (230)
T PF00561_consen 224 FNEIII 229 (230)
T ss_dssp HHHHHH
T ss_pred hhhhhc
Confidence 999886
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.6e-17 Score=206.18 Aligned_cols=124 Identities=20% Similarity=0.270 Sum_probs=105.4
Q ss_pred cCcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccC
Q 004396 484 DGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVA 563 (756)
Q Consensus 484 ~~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~ 563 (756)
.+.+++|.||+|+++|+|+|+||+++ +|.+++...+ ++.++++++.++|+. |+++++++.+|++||+
T Consensus 427 ~~~~v~g~e~lp~~~~~i~~~nH~s~-~D~~~~~~~~----~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~v~ 493 (1146)
T PRK08633 427 YRLRVEGRENIPAKGGALLLGNHVSW-IDWALLQAAS----PRPIRFVMERSIYEK--------WYLKWFFKLFGVIPIS 493 (1146)
T ss_pred EEEEEECCcCCCCCCCEEEEECCCch-HHHHHHHHHc----CCCeEEEeeHHhhhC--------hhHHHHHHHCCEEEec
Confidence 35689999999999999999999987 6988777663 567889999999987 6899999999999999
Q ss_pred HH-------hHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccch
Q 004396 564 AR-------NLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDI 627 (756)
Q Consensus 564 ~~-------~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~ 627 (756)
|. .+.+.|++|++|+|||||+|+... ++. ++|+|++++|.++++|||||++.|.+..
T Consensus 494 r~~~~~~~~~~~~~l~~g~~~~ifPeGt~~~~~------~~~-~~~~g~~~~a~~~~~~i~pv~~~g~~~~ 557 (1146)
T PRK08633 494 SGGSKESLEFIRKALDDGEVVCIFPEGAITRNG------QLN-EFKRGFELIVKGTDVPIIPFYIRGLWGS 557 (1146)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEECCcCCCCCC------Ccc-chhHHHHHHHHHCCCCEEEEEEeccccc
Confidence 84 456789999999999999996322 233 8999999999999999999999986544
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-17 Score=153.92 Aligned_cols=227 Identities=17% Similarity=0.154 Sum_probs=151.6
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCch-hhHHHhHhhh-c-CCcEEEEeccCCCCCCC----------hhHHHHHHHHHHH
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLG-LGLILHHKPL-G-KAFEVRCLHIPVYDRTP----------FEGLVKFVEETVR 233 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~-~~~~~~~~~L-~-~gy~Vi~~Dl~G~G~Ss----------~~~~a~dv~~~i~ 233 (756)
+.|.+.|. +...|++++|.-++. ..|.+++..| . ..+.|+++|-||+|.|. +..-+++..++++
T Consensus 33 l~y~~~G~---G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~ 109 (277)
T KOG2984|consen 33 LGYCKYGH---GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLME 109 (277)
T ss_pred eeeeecCC---CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHH
Confidence 57888887 566899999985554 5788888877 2 23999999999999992 4455666777777
Q ss_pred HhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCCh
Q 004396 234 REHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDP 313 (756)
Q Consensus 234 ~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (756)
.+... ++.++|+|=||..|+.+|+++++.|.++|+.+.+.-.+...... ...+.+.. .| +.....|
T Consensus 110 aLk~~----~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma----~kgiRdv~-----kW-s~r~R~P 175 (277)
T KOG2984|consen 110 ALKLE----PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMA----FKGIRDVN-----KW-SARGRQP 175 (277)
T ss_pred HhCCC----CeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHH----HhchHHHh-----hh-hhhhcch
Confidence 76655 99999999999999999999999999999987755332221111 11111100 00 0001111
Q ss_pred hHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH--HHHHhhhccCCCCcEEEEEeCCCC
Q 004396 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA--SAYANSRLHAVKAEVLVLASGKDN 391 (756)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~PvLvI~G~~D~ 391 (756)
.. ....+ ++....+..+ .......... ....+..+++++||+|+++|++|+
T Consensus 176 ~e-------~~Yg~-e~f~~~wa~w-------------------vD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp 228 (277)
T KOG2984|consen 176 YE-------DHYGP-ETFRTQWAAW-------------------VDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDP 228 (277)
T ss_pred HH-------HhcCH-HHHHHHHHHH-------------------HHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCC
Confidence 00 00000 0000000000 0000000000 001246789999999999999999
Q ss_pred CCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhccccc
Q 004396 392 MLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (756)
Q Consensus 392 ~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~r 440 (756)
+++..+ +..+....+.+++++++.++|.+++.-+++|+..+. +|+.
T Consensus 229 ~~~~~h-v~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~--dFl~ 274 (277)
T KOG2984|consen 229 FCGDPH-VCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVL--DFLK 274 (277)
T ss_pred CCCCCC-ccchhhhcccceEEEccCCCcceeeechHHHHHHHH--HHHh
Confidence 999996 888999999999999999999999999999999988 4443
|
|
| >TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.8e-17 Score=152.31 Aligned_cols=117 Identities=23% Similarity=0.284 Sum_probs=99.9
Q ss_pred CcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCH
Q 004396 485 GKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAA 564 (756)
Q Consensus 485 ~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~ 564 (756)
+++++|.+++|+++|+|+++||+.. +|.+++...+ .+.+++++++.+|+. |++++++..+|+++++|
T Consensus 3 ~~~v~g~~~lp~~~~~i~v~nH~s~-~D~~~~~~~~----~~~~~~~~~~~~~~~--------p~~~~~~~~~g~~~i~r 69 (130)
T TIGR00530 3 KVEVVGPENLPAKSPVLVVANHQSN-LDPLTLSAAF----PPPIVFIAKKELKWI--------PFFGIMLWLTGAIFIDR 69 (130)
T ss_pred EEEEECcccCCCCCCEEEEECCCch-hHHHHHHHHc----CCCcEEEEhHHhhhC--------CHHHHHHHHcCCEEecC
Confidence 5689999999999999999999976 7998766653 367888999988876 67899999999999987
Q ss_pred Hh----------HHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeee
Q 004396 565 RN----------LFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGA 621 (756)
Q Consensus 565 ~~----------~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~ 621 (756)
.+ +.++|++|..|+|||||+++. .+ ..+++++|++++|.++|+||||+++
T Consensus 70 ~~~~~~~~~~~~~~~~l~~g~~v~ifPeG~~~~----~~---~~~~f~~g~~~la~~~~~pvvpv~~ 129 (130)
T TIGR00530 70 ENIRAIATALKAAIEVLKQGRSIGVFPEGTRSR----GR---DILPFKKGAFHIAIKAGVPILPVVL 129 (130)
T ss_pred CChHHHHHHHHHHHHHHhCCCEEEEeCCCCCCC----CC---CCCCcchhHHHHHHHcCCCEEeEEe
Confidence 54 678899999999999999862 11 2458999999999999999999986
|
1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase. |
| >cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374 | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=158.58 Aligned_cols=166 Identities=20% Similarity=0.287 Sum_probs=115.9
Q ss_pred ccCcEEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcC
Q 004396 483 EDGKIVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMG 558 (756)
Q Consensus 483 ~~~~~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g 558 (756)
..+++++|.|++| +++|+|+++||++. +|++++.. .+..+.+++.+... . +++.++++.+|
T Consensus 7 ~~~~~v~g~e~l~~~~~~~~~~I~~~~H~s~-l~~~~~~~-----~~~~~~~v~~~~~~-~--------~~~~~~~~~~g 71 (189)
T cd07983 7 TLRWRVIGDESADALIAQGEPVILAFWHGRL-LLMPYLFR-----RRKRIAALISRSKD-G--------EIIARVLERLG 71 (189)
T ss_pred eEeEEEeCchhhhhhccCCCCEEEEEeCchH-HHhHHHhc-----cCCCeEEEEecCcC-H--------HHHHHHHHHhC
Confidence 3567899999998 57899999999863 56655432 14556666665432 2 56888999999
Q ss_pred ccccCH----------HhHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchh
Q 004396 559 AVPVAA----------RNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIA 628 (756)
Q Consensus 559 ~v~v~~----------~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~ 628 (756)
++++++ ..+.+.|++|..|+|||||+|... -++++|++++|.++|+||||+++.|.....
T Consensus 72 ~~~i~r~~~~~~~~~~~~~~~~lk~g~~v~ifpeG~r~~~----------~~~~~G~~~lA~~~~~pIvPv~i~~~~~~~ 141 (189)
T cd07983 72 IRVVRGSSSRGGAAALREMLRALKDGYNIAITPDGPRGPR----------YKVKPGVILLARKSGAPIVPVAIAASRAWR 141 (189)
T ss_pred CCEEEcCCCCcHHHHHHHHHHHHhCCCEEEEcCCCCCCcc----------eecchHHHHHHHHhCCCEEEEEEEEEccEe
Confidence 999964 246678899999999999987321 167899999999999999999998754321
Q ss_pred hhhcCccccccccchHHHHHHhhcccccccccccccccccccccCc-cCCCCCceEEEEeCCcccCCCCCCcCCCHHHHH
Q 004396 629 DLVLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPG-LLPKVPGRFYYLFGKPIQTKGREVSLKDKENAN 707 (756)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg-~~p~~p~~~~~~~G~PI~~~~~~~~~~~~~~~~ 707 (756)
..- +.. ..|...+++.+.||+||+++.. .+++..+
T Consensus 142 ~~~----------------------------------------~~~~~~p~~~~~~~v~~~~pi~~~~~----~~~~~~~ 177 (189)
T cd07983 142 LKS----------------------------------------WDRFIIPKPFSRVVIVFGEPIHVPPD----ADEEELE 177 (189)
T ss_pred ccC----------------------------------------ccccccCCCCcceEEEEeCCEeeCCC----CCHHHHH
Confidence 000 000 0222236899999999998742 2355566
Q ss_pred HHHHHHHHHH
Q 004396 708 ELYLHIKSQV 717 (756)
Q Consensus 708 ~l~~~v~~~v 717 (756)
++.+++.+.+
T Consensus 178 ~~~~~~~~~~ 187 (189)
T cd07983 178 EYRLELEAAL 187 (189)
T ss_pred HHHHHHHHHh
Confidence 6665555444
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins. |
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.5e-17 Score=201.96 Aligned_cols=123 Identities=20% Similarity=0.248 Sum_probs=105.7
Q ss_pred CcEEecccCCCCCC-CEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccC
Q 004396 485 GKIVKGLAGVPNEG-PVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVA 563 (756)
Q Consensus 485 ~~~v~g~~~lp~~g-p~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~ 563 (756)
+++++|.||+|+++ |+|+|+||+++ +|.+++...+ ++.+++++++++++. |+++.+++.+|++|++
T Consensus 440 ~~~~~g~~~~~~~~~~~i~~~nH~s~-~D~~~l~~~~----~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~ 506 (1140)
T PRK06814 440 RVEVKGLENLQKAGKKAVIAANHVSF-LDGPLLAAYL----PEEPTFAIDTDIAKA--------WWVKPFLKLAKALPVD 506 (1140)
T ss_pred EEEEeCCccccccCCCEEEEECCcch-HHHHHHHHhC----CCCeEEEEeHHHhhh--------hHHHHHHHhcCeeecC
Confidence 47899999999865 79999999988 7999888763 566889999999986 6889999999999999
Q ss_pred HHh------HHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccch
Q 004396 564 ARN------LFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDI 627 (756)
Q Consensus 564 ~~~------~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~ 627 (756)
|++ +.+.|++|++|+|||||+|+.. + ++. |+|+|++++|.++++||+||++.|....
T Consensus 507 r~~~~~~~~~~~~l~~g~~~~ifPeGtr~~~----~--~~~-~f~~g~~~~a~~~~~~i~pv~i~g~~~~ 569 (1140)
T PRK06814 507 PTNPMATRTLIKEVQKGEKLVIFPEGRITVT----G--SLM-KIYDGPGMIADKAGAMVVPVRIDGLQFT 569 (1140)
T ss_pred CCChHHHHHHHHHHHCCCEEEEeCCCCCCCC----C--Ccc-ccchHHHHHHHHCCCCEEEEEEcCcccc
Confidence 854 5678999999999999999532 2 233 9999999999999999999999988655
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.7e-16 Score=161.07 Aligned_cols=225 Identities=15% Similarity=0.079 Sum_probs=132.1
Q ss_pred CCEEEEECCCC----CchhhHHHhHhhh-cCCcEEEEeccCCCCCC-----ChhHHHHHHHHHHHHhhccC-CCCCEEEE
Q 004396 179 SPTLLFLPGID----GLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASS-PEKPIYLV 247 (756)
Q Consensus 179 ~p~lV~lHG~~----~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i~~l~~~~-~~~~v~Lv 247 (756)
++.+|++||.+ ++...|..+++.| +++|.|+++|+||||.| +++++.+|+.++++.+.... +.++++++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~ 105 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAPHLRRIVAW 105 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCcEEEE
Confidence 45677777754 3344566778888 56899999999999988 46778889999999876543 23579999
Q ss_pred EeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhc-hhHHHHhHHhHhhhhcCChhHHHHHhhhcCCC
Q 004396 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAM-PDELHCAVPYLLSYVMGDPIKMAMVNIENRLP 326 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (756)
||||||.+++.+|.. ++.++++|+++|........... ..... ...... ........... ..
T Consensus 106 G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~g~-----------~~ 168 (274)
T TIGR03100 106 GLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAAS---RIRHYYLGQLLS--ADFWRKLLSGE-----------VN 168 (274)
T ss_pred EECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHH---HHHHHHHHHHhC--hHHHHHhcCCC-----------cc
Confidence 999999999998765 47899999999864321111100 00000 000000 00000000000 00
Q ss_pred hHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHH----HHH
Q 004396 327 PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA----KRL 402 (756)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~----~~l 402 (756)
.......+...+..+.. ..... .. ......+...+.++++|+|+++|+.|...+.-.+. .+.
T Consensus 169 ~~~~~~~~~~~~~~~~~-----~~~~~---~~------~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~ 234 (274)
T TIGR03100 169 LGSSLRGLGDALLKARQ-----KGDEV---AH------GGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAW 234 (274)
T ss_pred HHHHHHHHHHHHHhhhh-----cCCCc---cc------chHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhh
Confidence 00011111111000000 00000 00 00223334667788999999999999886321100 344
Q ss_pred HHhC--CCeEEEEEcCCCCcccccch-hhHHHHhh
Q 004396 403 NNSL--QNCIVRNFKDNGHTLLLEEG-ISLLTIIK 434 (756)
Q Consensus 403 ~~~l--~~~~l~~i~~aGH~~~~e~p-~~~~~~I~ 434 (756)
.+.+ ++++++.+++++|++..|.. +++.+.|.
T Consensus 235 ~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~ 269 (274)
T TIGR03100 235 RGALEDPGIERVEIDGADHTFSDRVWREWVAARTT 269 (274)
T ss_pred HHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHH
Confidence 4444 79999999999999955554 88888887
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=169.29 Aligned_cols=205 Identities=15% Similarity=0.096 Sum_probs=128.1
Q ss_pred CCCEEEEECCCCCch-hhHHHhHhhh-cCCcEEEEeccCCCCCCCh----hHHHHHHHHHHHHhhccC--CCCCEEEEEe
Q 004396 178 GSPTLLFLPGIDGLG-LGLILHHKPL-GKAFEVRCLHIPVYDRTPF----EGLVKFVEETVRREHASS--PEKPIYLVGD 249 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~----~~~a~dv~~~i~~l~~~~--~~~~v~LvGh 249 (756)
..|+||++||+++.. ..|..+++.| ..||.|+++|+||+|.|.- .+......++++.+.... ...++.++||
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~ 272 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGF 272 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEE
Confidence 468888888887764 5677788888 6789999999999998831 233222234444433221 2358999999
Q ss_pred ChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHH
Q 004396 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (756)
Q Consensus 250 S~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (756)
||||.+|+.+|..+|++++++|+++|........ ......++......+.. .++.. ...
T Consensus 273 S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~----~~~~~~~p~~~~~~la~----~lg~~----------~~~--- 331 (414)
T PRK05077 273 RFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD----PKRQQQVPEMYLDVLAS----RLGMH----------DAS--- 331 (414)
T ss_pred ChHHHHHHHHHHhCCcCceEEEEECCccchhhcc----hhhhhhchHHHHHHHHH----HhCCC----------CCC---
Confidence 9999999999999999999999998865211000 00011111110000000 00000 000
Q ss_pred HHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhc-cCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCC
Q 004396 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL-HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN 408 (756)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~ 408 (756)
...+.. .+..+ .......+ .++++|+|+|+|++|.++|.+. ++.+.+..++
T Consensus 332 -~~~l~~-----------------------~l~~~---sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~-a~~l~~~~~~ 383 (414)
T PRK05077 332 -DEALRV-----------------------ELNRY---SLKVQGLLGRRCPTPMLSGYWKNDPFSPEED-SRLIASSSAD 383 (414)
T ss_pred -hHHHHH-----------------------Hhhhc---cchhhhhhccCCCCcEEEEecCCCCCCCHHH-HHHHHHhCCC
Confidence 000000 00000 00000112 5789999999999999999995 9999999999
Q ss_pred eEEEEEcCCCCcccccchhhHHHHhh
Q 004396 409 CIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 409 ~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
.++++++++ .+.+.++.+.+.+.
T Consensus 384 ~~l~~i~~~---~~~e~~~~~~~~i~ 406 (414)
T PRK05077 384 GKLLEIPFK---PVYRNFDKALQEIS 406 (414)
T ss_pred CeEEEccCC---CccCCHHHHHHHHH
Confidence 999999986 45678888877776
|
|
| >cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.7e-16 Score=155.55 Aligned_cols=164 Identities=23% Similarity=0.286 Sum_probs=121.3
Q ss_pred cCcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccC
Q 004396 484 DGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVA 563 (756)
Q Consensus 484 ~~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~ 563 (756)
..++++|.||+|+++|+|+++||+.. +|.+++...+....+..+.+++++..+. +..+++.+|+++++
T Consensus 12 ~~~~~~g~~~~p~~~~~i~v~nH~s~-~D~~~~~~~~~~~~~~~~~~v~~~~~~~-----------~~~~~~~~g~~~i~ 79 (187)
T cd06551 12 VRLEVKGPPPPPGGGPVLFVSNHSSW-WDGLILFLLLERGLRRDVYGLMDEELLE-----------RYPFFTRLGAFSVD 79 (187)
T ss_pred EEEEEeccccCCCCCCEEEEEcchhh-HHHHHHHHHHHhccCCCeEEEEcHhhhh-----------hChHHhhcCeEEec
Confidence 35789999999999999999999976 5988777665432345677777766651 22345666999997
Q ss_pred H----------HhHHHHhcC-CCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhhhhc
Q 004396 564 A----------RNLFKLLST-KSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVL 632 (756)
Q Consensus 564 ~----------~~~~~~l~~-g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~~ 632 (756)
| +.+.++|++ |..|+|||||+++... .. ..++++|++++|.++++||||+++.+.++.+
T Consensus 80 r~~~~~~~~~~~~~~~~l~~~g~~v~ifPeG~~~~~~-----~~-~~~~~~g~~~la~~~~~~IvPv~i~~~~~~~---- 149 (187)
T cd06551 80 RDSPRSAAKSLKYVARLLSKPGSVVWIFPEGTRTRRD-----KR-PLQFKPGVAHLAEKAGVPIVPVALRYTFELF---- 149 (187)
T ss_pred CCChhhHHHHHHHHHHHHhcCCcEEEEeCCcccCCCC-----CC-cccccchHHHHHHHcCCcEEEEEEecccccc----
Confidence 5 236778999 9999999999985322 12 2278999999999999999999998765551
Q ss_pred CccccccccchHHHHHHhhcccccccccccccccccccccCccCCCCCceEEEEeCCcccCCCCCCcCCCHHHHHHHHHH
Q 004396 633 DYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENANELYLH 712 (756)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~~p~~p~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~ 712 (756)
+...++++.||+||.++.. ...+++.++
T Consensus 150 ---------------------------------------------~~~~~~~i~~~~pi~~~~~-------~~~~~~~~~ 177 (187)
T cd06551 150 ---------------------------------------------EQFPEIFVRIGPPIPYAET-------ALGEELAAE 177 (187)
T ss_pred ---------------------------------------------CCCCcEEEEECCCcccccc-------ccHHHHHHH
Confidence 1146899999999999854 224556666
Q ss_pred HHHHHHHHH
Q 004396 713 IKSQVERCL 721 (756)
Q Consensus 713 v~~~v~~~~ 721 (756)
+.+.|++++
T Consensus 178 ~~~~~~~~~ 186 (187)
T cd06551 178 LANRLTRLL 186 (187)
T ss_pred HHHHHHHhc
Confidence 666665543
|
Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.2e-15 Score=167.81 Aligned_cols=252 Identities=18% Similarity=0.110 Sum_probs=149.7
Q ss_pred ceeeeeccCCCCCCCCCEEEEECCCCCchhhHH-----HhHhhh-cCCcEEEEeccCCCCCC----ChhHHHH-HHHHHH
Q 004396 164 PRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLI-----LHHKPL-GKAFEVRCLHIPVYDRT----PFEGLVK-FVEETV 232 (756)
Q Consensus 164 ~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~-----~~~~~L-~~gy~Vi~~Dl~G~G~S----s~~~~a~-dv~~~i 232 (756)
...++|.+... ...+++||++||+......|. .++..| ++||+|+++|++|+|.+ ++++++. ++.+.+
T Consensus 174 ~eLi~Y~P~t~-~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al 252 (532)
T TIGR01838 174 FQLIQYEPTTE-TVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAAL 252 (532)
T ss_pred EEEEEeCCCCC-cCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHH
Confidence 45677765543 124688999999987777664 577888 68999999999999987 4667764 466666
Q ss_pred HHhhccCCCCCEEEEEeChhhHHHH----HHHHhC-CCcceEEEEeCCCCcCCcCCcCCch---hHHhhchhHH------
Q 004396 233 RREHASSPEKPIYLVGDSFGGCLAL----AVAARN-PTIDLILILSNPATSFGRSQLQPLF---PILKAMPDEL------ 298 (756)
Q Consensus 233 ~~l~~~~~~~~v~LvGhS~GG~vAl----~~A~~~-P~~v~~lVLi~p~~~~~~~~~~~~~---~~~~~~~~~~------ 298 (756)
+.+....+.++++++||||||.++. .+++.+ ++++++++++++...+........+ .....+....
T Consensus 253 ~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~l 332 (532)
T TIGR01838 253 EVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYL 332 (532)
T ss_pred HHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCC
Confidence 6665445566999999999999852 245555 7899999999988766432111100 0000000000
Q ss_pred -HHhHHhHhhhhcCChhHHH--HHhhhcCCCh-HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHH----
Q 004396 299 -HCAVPYLLSYVMGDPIKMA--MVNIENRLPP-RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY---- 370 (756)
Q Consensus 299 -~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 370 (756)
...+...|..+..+.+... .........+ ......+.. -...++.....+.+..+...+..
T Consensus 333 pg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~-----------D~t~lP~~~~~~~lr~ly~~N~L~~G~ 401 (532)
T TIGR01838 333 DGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNS-----------DSTNLPGKMHNFYLRNLYLQNALTTGG 401 (532)
T ss_pred CHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhc-----------cCccchHHHHHHHHHHHHhcCCCcCCe
Confidence 0001111111111110000 0000000000 000000000 00112333333333222211111
Q ss_pred -----HhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhh
Q 004396 371 -----ANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGIS 428 (756)
Q Consensus 371 -----~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~ 428 (756)
....+.+|++|+|+|+|++|.++|.+. ++.+.+.+++.+..+++++||.+++++|..
T Consensus 402 ~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~s-a~~l~~~i~~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 402 LEVCGVRLDLSKVKVPVYIIATREDHIAPWQS-AYRGAALLGGPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred eEECCEecchhhCCCCEEEEeeCCCCcCCHHH-HHHHHHHCCCCEEEEECCCCCchHhhCCCC
Confidence 125678899999999999999999995 899999999999999999999999999864
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.6e-15 Score=154.48 Aligned_cols=108 Identities=19% Similarity=0.220 Sum_probs=78.9
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCC-------hh-------HHHHHHHHH
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-------FE-------GLVKFVEET 231 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-------~~-------~~a~dv~~~ 231 (756)
++|.+.+..++..|+||++||++++...|..+++.| .+||.|+++|+||||.+. +. +..+|+.++
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 344444332234789999999999998899899999 568999999999998751 11 224556566
Q ss_pred HHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeC
Q 004396 232 VRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSN 274 (756)
Q Consensus 232 i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~ 274 (756)
++.+.... ..++++++||||||.+++.+++++|+...+++++.
T Consensus 95 ~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 95 RAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred HHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 66554332 34689999999999999999999887655555544
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.2e-15 Score=142.07 Aligned_cols=143 Identities=24% Similarity=0.338 Sum_probs=113.1
Q ss_pred EEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHH
Q 004396 181 TLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAV 259 (756)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~ 259 (756)
+||++||++++...|..+.+.| +++|.|+++|+|++|.+...+-++++.+.++.... ...+++++|||+||.+++.+
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~ 78 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGADAVERVLADIRAGYP--DPDRIILIGHSMGGAIAANL 78 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSHHHHHHHHHHHHHHC--TCCEEEEEEETHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhHHHHHHHHHHHhhcC--CCCcEEEEEEccCcHHHHHH
Confidence 5899999999999999999999 67899999999999998544444444444322122 34599999999999999999
Q ss_pred HHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhh
Q 004396 260 AARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLP 339 (756)
Q Consensus 260 A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (756)
+.++ ..++++|++++.. .
T Consensus 79 ~~~~-~~v~~~v~~~~~~------------------~------------------------------------------- 96 (145)
T PF12695_consen 79 AARN-PRVKAVVLLSPYP------------------D------------------------------------------- 96 (145)
T ss_dssp HHHS-TTESEEEEESESS------------------G-------------------------------------------
T ss_pred hhhc-cceeEEEEecCcc------------------c-------------------------------------------
Confidence 9998 8899999998710 0
Q ss_pred hhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC-CeEEEEEcCCC
Q 004396 340 ALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNG 418 (756)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~-~~~l~~i~~aG 418 (756)
.+.+.+.+.|+++++|++|..++.+. .+++.+.++ +.+++++++++
T Consensus 97 --------------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~i~g~~ 143 (145)
T PF12695_consen 97 --------------------------------SEDLAKIRIPVLFIHGENDPLVPPEQ-VRRLYEALPGPKELYIIPGAG 143 (145)
T ss_dssp --------------------------------CHHHTTTTSEEEEEEETT-SSSHHHH-HHHHHHHHCSSEEEEEETTS-
T ss_pred --------------------------------hhhhhccCCcEEEEEECCCCcCCHHH-HHHHHHHcCCCcEEEEeCCCc
Confidence 02234556799999999999999985 888888777 68999999999
Q ss_pred Cc
Q 004396 419 HT 420 (756)
Q Consensus 419 H~ 420 (756)
|+
T Consensus 144 H~ 145 (145)
T PF12695_consen 144 HF 145 (145)
T ss_dssp TT
T ss_pred Cc
Confidence 95
|
... |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-15 Score=150.15 Aligned_cols=179 Identities=18% Similarity=0.176 Sum_probs=116.1
Q ss_pred CEEEEECCCCCchhhHHH--hHhhhc---CCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhH
Q 004396 180 PTLLFLPGIDGLGLGLIL--HHKPLG---KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGC 254 (756)
Q Consensus 180 p~lV~lHG~~~s~~~~~~--~~~~L~---~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~ 254 (756)
|+|||+||++++...|.. +.+.++ .+|+|+++|+|||+ +++++++.++++++.. ++++++||||||.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~----~~~~~~l~~l~~~~~~----~~~~lvG~S~Gg~ 73 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP----ADAAELLESLVLEHGG----DPLGLVGSSLGGY 73 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH----HHHHHHHHHHHHHcCC----CCeEEEEECHHHH
Confidence 579999999999999984 335553 37999999999996 5788888888887544 3899999999999
Q ss_pred HHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHH
Q 004396 255 LALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQL 334 (756)
Q Consensus 255 vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (756)
+|+.+|.++|. ++|+++|+... . ..+. ..+... .++ .........+..
T Consensus 74 ~a~~~a~~~~~---~~vl~~~~~~~-------~----~~~~--------~~~~~~-~~~---------~~~~~~~~~~~~ 121 (190)
T PRK11071 74 YATWLSQCFML---PAVVVNPAVRP-------F----ELLT--------DYLGEN-ENP---------YTGQQYVLESRH 121 (190)
T ss_pred HHHHHHHHcCC---CEEEECCCCCH-------H----HHHH--------HhcCCc-ccc---------cCCCcEEEcHHH
Confidence 99999999983 46888885421 0 0000 000000 000 000000000000
Q ss_pred HhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEE
Q 004396 335 SNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNF 414 (756)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i 414 (756)
.+ .........+. .++|+++++|++|.++|.+. +.++.+ +++.+++
T Consensus 122 ~~-----------------------------d~~~~~~~~i~-~~~~v~iihg~~De~V~~~~-a~~~~~---~~~~~~~ 167 (190)
T PRK11071 122 IY-----------------------------DLKVMQIDPLE-SPDLIWLLQQTGDEVLDYRQ-AVAYYA---ACRQTVE 167 (190)
T ss_pred HH-----------------------------HHHhcCCccCC-ChhhEEEEEeCCCCcCCHHH-HHHHHH---hcceEEE
Confidence 00 00000012233 67889999999999999995 888887 4578889
Q ss_pred cCCCCcccccchhhHHHHhh
Q 004396 415 KDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 415 ~~aGH~~~~e~p~~~~~~I~ 434 (756)
+|++|.. ...++..+.+.
T Consensus 168 ~ggdH~f--~~~~~~~~~i~ 185 (190)
T PRK11071 168 EGGNHAF--VGFERYFNQIV 185 (190)
T ss_pred CCCCcch--hhHHHhHHHHH
Confidence 9999987 33355544444
|
|
| >PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function [] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.6e-17 Score=154.41 Aligned_cols=120 Identities=22% Similarity=0.367 Sum_probs=71.5
Q ss_pred cEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCH-
Q 004396 486 KIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAA- 564 (756)
Q Consensus 486 ~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~- 564 (756)
++|+|.||+|+++|+|+++||+++ +|.+++...+.+..+..+++++...++.. |+++.+++.+|.++++|
T Consensus 2 v~v~g~e~l~~~~~~i~v~NH~s~-~D~~~l~~~~~~~~~~~~~~~~~~~~~~~--------p~~~~~~~~~~~i~i~r~ 72 (132)
T PF01553_consen 2 VEVEGLENLPKGGGVIFVSNHQSW-LDGFALMALLQRSGPRRPRFVAKDELFKI--------PFLGWFLRRLGFIPIDRS 72 (132)
T ss_dssp ----HHHHHHTT-EEEEEE----T-THHHHHHHHHTTT-HHH-EEEEECHHHH---------TTTHHHHHEEEEE--CCH
T ss_pred CccCccccCCCCCCEEEEecCCCC-CcchheeehhhhhccccceeEeeeccccc--------hhhhhhhhhccceeeeee
Confidence 578999999999999999999988 79988888764444467888999888876 57889999999999999
Q ss_pred ---------HhHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeee
Q 004396 565 ---------RNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGA 621 (756)
Q Consensus 565 ---------~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~ 621 (756)
+.+.+.|++|..|+|||||++... +++ .++++|++++|.+++++||||++
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~i~ifPEG~~~~~------~~~-~~~~~G~~~~a~~~~~~ivPv~i 131 (132)
T PF01553_consen 73 NRKKNRKALKDIKEILRKGGSIVIFPEGTRSRS------GEL-LPFKKGAFHIALKAKVPIVPVAI 131 (132)
T ss_dssp HHHHHHHHHHHHHHHHHC---EEE-TT-S---B--------B-----HHHHHHHHHH---------
T ss_pred cccccchhHHHHHHHhhhcceeeecCCccCcCC------Ccc-CCccHHHHHHHHHcCCccccccC
Confidence 346678899999999999988432 334 59999999999999999999987
|
This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A. |
| >KOG4321 consensus Predicted phosphate acyltransferases [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.7e-17 Score=148.23 Aligned_cols=180 Identities=24% Similarity=0.386 Sum_probs=144.9
Q ss_pred cccCcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccc
Q 004396 482 LEDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVP 561 (756)
Q Consensus 482 ~~~~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~ 561 (756)
.++|++|.|+||+|.+||.++|.+|...++|...+...++.++.+.+..+.+..+|+- |+|..+-..+..-|
T Consensus 28 iyhgyeviglenvpqegpalivyyhgaipidmyylnsrmllqrerliytigdrflfkl--------pgwgtiseafhvsp 99 (279)
T KOG4321|consen 28 IYHGYEVIGLENVPQEGPALIVYYHGAIPIDMYYLNSRMLLQRERLIYTIGDRFLFKL--------PGWGTISEAFHVSP 99 (279)
T ss_pred hccceeEeecccCCCcCceEEEEEcCccceeeeeechHHHHhhhhheEeecceeEEeC--------CCccchhhhhccCC
Confidence 4689999999999999999999999988899988888888888999999999999976 57877888899999
Q ss_pred cCHHhHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhhhhcCcccccccc
Q 004396 562 VAARNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLDYKDLMSIP 641 (756)
Q Consensus 562 v~~~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~~~~~~~~~~~ 641 (756)
.+-.+|...|++|..+.|-|||+-|+... +.-|.+.|+.+-||++.|+++++||+|++..+-.+-|..+ .
T Consensus 100 gtvqscvsilrdgnllaispggvyeaqfg-dhyyellwrnrvgfakvaieakapiipcftqnlregfrqv---------g 169 (279)
T KOG4321|consen 100 GTVQSCVSILRDGNLLAISPGGVYEAQFG-DHYYELLWRNRVGFAKVAIEAKAPIIPCFTQNLREGFRQV---------G 169 (279)
T ss_pred ccHHHHHHhhccCcEEEEcCCceeeeccc-hHHHHHHHhccccceeeeeecCCCccchhHHHHHHHHHHh---------h
Confidence 99999999999999999999999988764 5569999999999999999999999999986444443222 1
Q ss_pred chHHHHHHhhcccccccccccccccccccccC--ccCCCCCceEEEEeCCcccCCC
Q 004396 642 VINDCVRELARDTVNIRDDTRGEVANQALFFP--GLLPKVPGRFYYLFGKPIQTKG 695 (756)
Q Consensus 642 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~p--g~~p~~p~~~~~~~G~PI~~~~ 695 (756)
+++-++..+..+ +| +| -++..+|.++....||||+.++
T Consensus 170 ifrtffmrlynk---vr-------------ipvypiyggfpvkfrtylgkpipyde 209 (279)
T KOG4321|consen 170 IFRTFFMRLYNK---VR-------------IPVYPIYGGFPVKFRTYLGKPIPYDE 209 (279)
T ss_pred HHHHHHHHHhhc---cc-------------ceeeeccCCcceeehhhcCCCCCCCC
Confidence 122222222211 22 33 1222357889999999999764
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.3e-15 Score=160.69 Aligned_cols=102 Identities=20% Similarity=0.207 Sum_probs=83.8
Q ss_pred CCEEEEECCCCCchhhH-----HHhHhhh-cCCcEEEEeccCCCCCC----ChhHHHH-HHHHHHHHhhccCCCCCEEEE
Q 004396 179 SPTLLFLPGIDGLGLGL-----ILHHKPL-GKAFEVRCLHIPVYDRT----PFEGLVK-FVEETVRREHASSPEKPIYLV 247 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~-----~~~~~~L-~~gy~Vi~~Dl~G~G~S----s~~~~a~-dv~~~i~~l~~~~~~~~v~Lv 247 (756)
+++||++||+..+...+ ..+++.| .+||+|+++|++|+|.+ ++++++. ++.++++.+....+.++++++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lv 141 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKLDQISLL 141 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCCCcccEE
Confidence 55799999986555444 4678888 67899999999999976 5777764 477777777666666799999
Q ss_pred EeChhhHHHHHHHHhCCCcceEEEEeCCCCcCC
Q 004396 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFG 280 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~ 280 (756)
||||||.+++.+++.+|+.++++|++++...+.
T Consensus 142 GhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 142 GICQGGTFSLCYAALYPDKIKNLVTMVTPVDFE 174 (350)
T ss_pred EECHHHHHHHHHHHhCchheeeEEEeccccccC
Confidence 999999999999999999999999999877543
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.6e-16 Score=155.85 Aligned_cols=111 Identities=19% Similarity=0.213 Sum_probs=88.5
Q ss_pred CCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCHHh--------
Q 004396 495 PNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARN-------- 566 (756)
Q Consensus 495 p~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~~~-------- 566 (756)
++++|+|+|+||+++ +|.+++...+. ..+..+++++....|.. ++++++++.+|+++|+|++
T Consensus 19 ~~~~~~i~v~NH~S~-lD~~~l~~~~~-~~~~~~~~va~~e~~~~--------~~~g~~l~~~g~i~I~R~~~~~~~~~~ 88 (205)
T cd07993 19 QEGHPVVLLPTHRSY-LDFLLLSFILF-SLGLPLPHIAAGENLNI--------PILGTLLRRLGAFFIRRSFGKDPLYRA 88 (205)
T ss_pred hcCCCEEEEecCcch-hHHHHHHHHHH-HCCCCCcEEEEchhhCc--------HHHHHHHHHCCCEEEecCCCccHHHHH
Confidence 334899999999987 79988776643 34455677777777755 5788999999999998752
Q ss_pred -----HHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHc-------CCceeeeeee
Q 004396 567 -----LFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARF-------GATIVPFGAV 622 (756)
Q Consensus 567 -----~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~-------g~~IVPv~~~ 622 (756)
+.++|++|.+|+|||||||+. ++ ++ .++|.|++++|.++ ++|||||++.
T Consensus 89 ~~~~~~~~~l~~g~~l~iFPEGtrs~----~g--~~-~~~k~G~~~~a~~~~~~~~~~~v~IvPV~i~ 149 (205)
T cd07993 89 VLQEYVQELLKNGQPLEFFIEGTRSR----TG--KL-LPPKLGLLSVVVEAYLKGSVPDVLIVPVSIS 149 (205)
T ss_pred HHHHHHHHHHhCCceEEEEcCCCCCC----CC--Cc-cchHHHHHHHHHHHHhhCCCCCeEEEEeEEe
Confidence 356889999999999999953 22 23 38899999999998 9999999995
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.1e-14 Score=147.07 Aligned_cols=247 Identities=21% Similarity=0.231 Sum_probs=142.1
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcC---CcEEEEeccCCCCCCC-----hhHHHHHHHHHHHHhhcc
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK---AFEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHAS 238 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~---gy~Vi~~Dl~G~G~Ss-----~~~~a~dv~~~i~~l~~~ 238 (756)
+.+...+.. .|+++++||++++...|......+.. .|+|+++|+||||.|+ ...+++++..+++.++..
T Consensus 12 ~~~~~~~~~---~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~ 88 (282)
T COG0596 12 LAYREAGGG---GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDALGLE 88 (282)
T ss_pred EEEeecCCC---CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCCcccccHHHHHHHHHHHHHHhCCC
Confidence 344444442 55899999999999999884333321 2999999999999984 445578888998886655
Q ss_pred CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCC-------chhHHhhchhHH-HHhHHhHhhhhc
Q 004396 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP-------LFPILKAMPDEL-HCAVPYLLSYVM 310 (756)
Q Consensus 239 ~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~ 310 (756)
+++++||||||.+++.++.++|+.+.++|++++........... ............ ............
T Consensus 89 ----~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (282)
T COG0596 89 ----KVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALG 164 (282)
T ss_pred ----ceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhccc
Confidence 69999999999999999999999999999999865311100000 000000000000 000000000000
Q ss_pred -CChhHHHH-HhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeC
Q 004396 311 -GDPIKMAM-VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG 388 (756)
Q Consensus 311 -~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~ 388 (756)
........ ........ ......... .... ................ .....+..+++|+++++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~ 230 (282)
T COG0596 165 LLAALAAAARAGLAEALR-----APLLGAAAA---AFAR----AARADLAAALLALLDR--DLRAALARITVPTLIIHGE 230 (282)
T ss_pred ccccccccchhccccccc-----cccchhHhh---hhhh----hcccccchhhhccccc--ccchhhccCCCCeEEEecC
Confidence 00000000 00000000 000000000 0000 0000000000000000 1124567788999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCC-eEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 389 KDNMLPSEDEAKRLNNSLQN-CIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 389 ~D~~vp~~~~~~~l~~~l~~-~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+|.+.+... ...+.+.+++ +++.+++++||+.++++|+.+++.+.+
T Consensus 231 ~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 277 (282)
T COG0596 231 DDPVVPAEL-ARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLA 277 (282)
T ss_pred CCCcCCHHH-HHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHH
Confidence 997777663 6777778885 999999999999999999999888874
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.2e-15 Score=160.73 Aligned_cols=126 Identities=18% Similarity=0.176 Sum_probs=91.2
Q ss_pred hhcccccCCCCCceeeeeccCCC--CCCCCCEEEEECCCCCchhhHHH------hHhhh-cCCcEEEEeccCCCCCC---
Q 004396 152 AAKEIIKPDGGPPRWFCPVDCGR--PLKGSPTLLFLPGIDGLGLGLIL------HHKPL-GKAFEVRCLHIPVYDRT--- 219 (756)
Q Consensus 152 ~~~~~~~~dg~~~~~~~~~~~G~--~~~~~p~lV~lHG~~~s~~~~~~------~~~~L-~~gy~Vi~~Dl~G~G~S--- 219 (756)
+...+.+.||..+....+...+. ...++|+|+|+||+++++..|.. +...| .+||+|+++|+||++.|
T Consensus 45 e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh 124 (395)
T PLN02872 45 TEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGH 124 (395)
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCC
Confidence 44567788887754444321111 01246899999999999888742 33346 56899999999998643
Q ss_pred -------------ChhHHH-HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCC---cceEEEEeCCCCcC
Q 004396 220 -------------PFEGLV-KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT---IDLILILSNPATSF 279 (756)
Q Consensus 220 -------------s~~~~a-~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~---~v~~lVLi~p~~~~ 279 (756)
++++++ .|+.++++.+.... .+++++|||||||.+++.++ .+|+ +++.+++++|....
T Consensus 125 ~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~-~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 125 VTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT-NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred CCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc-CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhh
Confidence 366777 79999999875432 35899999999999998555 5776 68888999987643
|
|
| >PRK14014 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=9.5e-14 Score=146.19 Aligned_cols=133 Identities=14% Similarity=0.082 Sum_probs=102.0
Q ss_pred ccCcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCcccc
Q 004396 483 EDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPV 562 (756)
Q Consensus 483 ~~~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v 562 (756)
...++|+|.|++|+++|+|+|+||+++ +|.+++...+.+ .-...+++++.+++.. |++++.+..+|.+.+
T Consensus 72 g~k~~V~G~e~l~~~~~~IiisNHqS~-~D~l~l~~~~~~-~~~~~kfv~K~eL~~i--------P~~G~~~~~~~~ifi 141 (301)
T PRK14014 72 RTQWDVEGLEGLSKKGWYLVISNHQSW-VDILVLQYVFNR-RIPMLKFFLKQELIWV--------PFLGLAWWALDFPFM 141 (301)
T ss_pred CcEEEEEcCCCCCCCCCEEEEECCCcH-HHHHHHHHHHhh-ccCceEEEehHHhhhc--------ccHHHHHHHcCCeEE
Confidence 346789999999999999999999988 699887776543 2235788999999876 688999999999999
Q ss_pred CHHh---------------------HHHHhcCCCeEEEEeCcchhcccc---CCcceeEEcCCchhHHHHHHHcC----C
Q 004396 563 AARN---------------------LFKLLSTKSHVLLYPGGAREALHY---KGEEYKLFWPEQQEFVRMAARFG----A 614 (756)
Q Consensus 563 ~~~~---------------------~~~~l~~g~~v~ifPeG~re~~~~---~~~~~~l~~~~~~gf~rlA~~~g----~ 614 (756)
+|.+ +.++.+.|..++|||||||..... ....|+-.++.|.|.+++|.++. .
T Consensus 142 ~R~~~~~~~~~p~~~~~d~~~~~~a~~~~~~~~~~l~IFPEGTR~t~~k~~~~~~~~~~lL~pk~ggf~~a~~~~~~~~~ 221 (301)
T PRK14014 142 KRYSKAYLAKNPELKGKDLETTRRACEKFKRMPTTIVNFVEGTRFTPEKHQQQQSPYQHLLKPKAGGIAFALNAMGEQFD 221 (301)
T ss_pred eccchhhhhhchhhhhhHHHHHHHHHHHHhcCCcEEEEeccceecCcccccccCCCcccccCCCCccHHHHHHhhhccCC
Confidence 8742 112233478999999999954332 11234344588999999999986 7
Q ss_pred ceeeeeeeccc
Q 004396 615 TIVPFGAVGED 625 (756)
Q Consensus 615 ~IVPv~~~G~~ 625 (756)
+|+||.+.+.+
T Consensus 222 ~I~dvti~y~~ 232 (301)
T PRK14014 222 GLLDVTIVYPD 232 (301)
T ss_pred EEEEEEEEeCC
Confidence 89999998665
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.7e-14 Score=139.70 Aligned_cols=179 Identities=20% Similarity=0.201 Sum_probs=134.6
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcC--CcEEEEeccCCCCCC----ChhHHHHHHHHHHHHhhccC-CCCCEEEEEeCh
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRT----PFEGLVKFVEETVRREHASS-PEKPIYLVGDSF 251 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~--gy~Vi~~Dl~G~G~S----s~~~~a~dv~~~i~~l~~~~-~~~~v~LvGhS~ 251 (756)
.+++++.||......+...+...|+. +++|+++|+.|+|.| +-....+|+.++.+.+...+ +..+++|+|+|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~Si 139 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQSI 139 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEecC
Confidence 58999999997776666666667755 799999999999999 34467788999998888887 478999999999
Q ss_pred hhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHH
Q 004396 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKL 331 (756)
Q Consensus 252 GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (756)
|+..++.+|++.| +.++||.+|-.+..+- . .+ +. ..
T Consensus 140 Gt~~tv~Lasr~~--~~alVL~SPf~S~~rv--------~--~~----------------~~----------------~~ 175 (258)
T KOG1552|consen 140 GTVPTVDLASRYP--LAAVVLHSPFTSGMRV--------A--FP----------------DT----------------KT 175 (258)
T ss_pred CchhhhhHhhcCC--cceEEEeccchhhhhh--------h--cc----------------Cc----------------ce
Confidence 9999999999998 9999999984422000 0 00 00 00
Q ss_pred HHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCe-E
Q 004396 332 EQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC-I 410 (756)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~-~ 410 (756)
..+.+. ++. .+.+..|+||+|++||++|.+++... ..++.+..++. +
T Consensus 176 ~~~~d~--------------f~~-----------------i~kI~~i~~PVLiiHgtdDevv~~sH-g~~Lye~~k~~~e 223 (258)
T KOG1552|consen 176 TYCFDA--------------FPN-----------------IEKISKITCPVLIIHGTDDEVVDFSH-GKALYERCKEKVE 223 (258)
T ss_pred EEeecc--------------ccc-----------------cCcceeccCCEEEEecccCceecccc-cHHHHHhccccCC
Confidence 000000 000 26678899999999999999999997 99999999865 8
Q ss_pred EEEEcCCCCcccccchhhHHHHh
Q 004396 411 VRNFKDNGHTLLLEEGISLLTII 433 (756)
Q Consensus 411 l~~i~~aGH~~~~e~p~~~~~~I 433 (756)
-.++.|+||.-..-.|+-+....
T Consensus 224 pl~v~g~gH~~~~~~~~yi~~l~ 246 (258)
T KOG1552|consen 224 PLWVKGAGHNDIELYPEYIEHLR 246 (258)
T ss_pred CcEEecCCCcccccCHHHHHHHH
Confidence 88899999987766655444433
|
|
| >cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-13 Score=134.75 Aligned_cols=164 Identities=24% Similarity=0.328 Sum_probs=122.2
Q ss_pred ccCcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCcccc
Q 004396 483 EDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPV 562 (756)
Q Consensus 483 ~~~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v 562 (756)
..+++++|.+++++++|+|+++||+.. +|.+++...+ +.....++.+.++.. +++.++++.+|.+++
T Consensus 9 ~~~v~v~~~~~~~~~~~~i~~~nH~~~-~D~~~~~~~~----~~~~~~v~~~~~~~~--------~~~~~~~~~~g~~~v 75 (184)
T cd07989 9 GVRVRVEGLENLPPKGPVIIVANHQSY-LDPLVLGAAL----PRPIRFVAKKELFKI--------PFLGWLLRLLGAIPI 75 (184)
T ss_pred ceEEEEEccccCCCCCCEEEEECCcch-HHHHHHHhhc----cCceEEEEhHHhhhC--------chHHHHHHHCCeEEE
Confidence 356789999999988999999999966 5886655543 345677888777654 678899999999999
Q ss_pred CHH----------hHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhhhhc
Q 004396 563 AAR----------NLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVL 632 (756)
Q Consensus 563 ~~~----------~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~~ 632 (756)
++. .+.++|++|+.++|||||+++.. ....+++.|.+++|.++++||||+++.|.+..+...
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~g~~l~i~peg~~~~~-------~~~~~~~~g~~~lA~~~~~~Vvpv~~~~~~~~~~~~- 147 (184)
T cd07989 76 DRGNGRSAREALREAIEALKEGESVVIFPEGTRSRD-------GELLPFKSGAFRLAKEAGVPIVPVAISGTWGSLPKG- 147 (184)
T ss_pred ecCCchhHHHHHHHHHHHHHCCCEEEEecCcccCCC-------CCcCCCcccHHHHHHHcCCCEEeEEEeChhhhCcCC-
Confidence 652 35678889999999999997532 224488999999999999999999998876663211
Q ss_pred CccccccccchHHHHHHhhcccccccccccccccccccccCccCCCCCceEEEEeCCcccCCCCCCcCCCHHHHHHHHHH
Q 004396 633 DYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENANELYLH 712 (756)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~~p~~p~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~ 712 (756)
..+..+.++++.||+||+++.. ..+.+...++.++
T Consensus 148 ------------------------------------------~~~~~~~~~~i~~~~pi~~~~~---~~~~~~~~~~~~~ 182 (184)
T cd07989 148 ------------------------------------------KKLPRPGRVTVRIGEPIPPEGL---ELAEEDRKELREK 182 (184)
T ss_pred ------------------------------------------CCcCCCCcEEEEEcCCcChhhh---ccchHHHHHHHHh
Confidence 1223356799999999998864 2334444444443
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins. |
| >PRK03355 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.9e-14 Score=159.96 Aligned_cols=120 Identities=15% Similarity=0.135 Sum_probs=91.7
Q ss_pred cEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCHH
Q 004396 486 KIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAAR 565 (756)
Q Consensus 486 ~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~~ 565 (756)
..++.++++++++|+|||+||.++ +|.+++...+.+.--..++++|...++. |+++++++.+|++++.|+
T Consensus 255 ~~~~~lr~~~~~~~vV~vpNHrS~-lD~lll~~~l~~~gl~~~~i~Ag~~L~~---------~~lG~llr~~Ga~fIrR~ 324 (783)
T PRK03355 255 YELAALRALLEEHPAVLLFSHRSY-IDGLVVPVAMQENRLPPVHVFGGINLSF---------GPMGPIMRRSGMIFIRRN 324 (783)
T ss_pred HHHHHHHhccCCCCEEEEECCCcc-hHHHHHHHHHhhcCCCCcEEEeHHHhcc---------HHHHHHHHHcCcEEecCC
Confidence 344556778889999999999987 6998887775433225677777777652 468899999999999984
Q ss_pred h-------------HHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHH-------HcCCceeeeeee
Q 004396 566 N-------------LFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAA-------RFGATIVPFGAV 622 (756)
Q Consensus 566 ~-------------~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~-------~~g~~IVPv~~~ 622 (756)
. ...+++.|.+|.+||||||+..+ ++ .++|.|..+++. ..++|||||++.
T Consensus 325 ~~~~~ly~~vl~eyi~~Ll~~G~~v~iFpEGTRSrtG------kL-l~pK~Gll~~~~~a~~~~~~~~v~IVPV~I~ 394 (783)
T PRK03355 325 IGDDPLYKYVLREYVGYLVEKRFNLSWYIEGTRSRTG------KL-LPPKLGLLSYVADAYLDGRSDDVLLQPVSIS 394 (783)
T ss_pred CCchHHHHHHHHHHHHHHHhCCCeEEEEecCCCCCCC------CC-CcccccHHHHHHHHHHhcccCCCEEEEEEEE
Confidence 2 12345679999999999996332 23 389999988775 479999999995
|
|
| >TIGR03703 plsB glycerol-3-phosphate O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.51 E-value=9.2e-14 Score=161.79 Aligned_cols=121 Identities=18% Similarity=0.211 Sum_probs=92.7
Q ss_pred ccCcEEecccCCCC---CC-CEEEEecCCCchhhHHHHHHHHHHhcCce-eccccccccccccccccCCCccHHHHHHHc
Q 004396 483 EDGKIVKGLAGVPN---EG-PVLLVGYHMLLGFELYSLVEEFLREKNIM-VHGIAHPEIFLGRLENSSNEFGMTDWLKVM 557 (756)
Q Consensus 483 ~~~~~v~g~~~lp~---~g-p~l~v~NH~~~~~d~~~l~~~~~~~~~~~-~r~la~~~~f~~~~~~~~p~~~~~~~~~~~ 557 (756)
.+|+.|.|.|++|+ ++ |+|||+||.++ +|.+++...+. ..+.. .+..+...+ .. |+++++++..
T Consensus 273 y~~v~V~g~E~l~~~~~~~~pvI~vpNHrS~-lD~llL~~~l~-~~~l~~p~iaag~nL-~~--------p~~g~llr~~ 341 (799)
T TIGR03703 273 YQGINVNNADRVRKLAQKGHEIIYVPCHRSH-MDYLLLSYVLY-HEGLVPPHIAAGINL-NF--------WPAGPIFRRG 341 (799)
T ss_pred cCceEEechhhcccccCCCCcEEEEECCCCc-hHHHHHHHHHh-hcCCCCceEEechhh-cc--------HHHHHHHHHC
Confidence 46788999999995 55 99999999986 79988776654 33433 333333332 22 6788999999
Q ss_pred CccccCHHh-------------HHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHc-------CCcee
Q 004396 558 GAVPVAARN-------------LFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARF-------GATIV 617 (756)
Q Consensus 558 g~v~v~~~~-------------~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~-------g~~IV 617 (756)
|++++.|+. +..++++|.+|.|||||+|+. .+ ++. ++|.|..+||.+. +++||
T Consensus 342 GaffIrR~~~~~~ly~~vl~eyi~~ll~~G~~v~iFpEGtRSr----tG--kll-~pK~G~l~~a~~a~~~~~~~~v~IV 414 (799)
T TIGR03703 342 GAFFIRRSFKGNKLYSAVFREYLHELFAKGYSVEYFVEGGRSR----TG--RLL-PPKTGMLAMTLQAMLRGIRRPITLV 414 (799)
T ss_pred CceEeecCCCcchhHHHHHHHHHHHHHhCCCEEEEEcCCCcCC----CC--Ccc-chHHHHHHHHHHHhhccCCCCcEEE
Confidence 999998842 235789999999999999963 22 233 8999999999887 89999
Q ss_pred eeee
Q 004396 618 PFGA 621 (756)
Q Consensus 618 Pv~~ 621 (756)
||++
T Consensus 415 PVsI 418 (799)
T TIGR03703 415 PVYI 418 (799)
T ss_pred EEEE
Confidence 9988
|
Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system. |
| >PLN02833 glycerol acyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-13 Score=147.95 Aligned_cols=173 Identities=13% Similarity=0.121 Sum_probs=105.3
Q ss_pred cEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCHH
Q 004396 486 KIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAAR 565 (756)
Q Consensus 486 ~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~~ 565 (756)
++++|.++.|. +|+|+|+||+++ +|.+++.... . ..++++.... +++ ++.+.+++..|+++++|+
T Consensus 152 i~v~G~e~~~~-~~~IiVaNH~S~-lDi~vL~s~~----p--~~~v~kk~~~------~~~-~~~~~~~~~~g~I~VdR~ 216 (376)
T PLN02833 152 IKYHGPRPSRR-PKQVFVANHTSM-IDFIVLEQMT----P--FAVIMQKHPG------WVG-FLQNTILESVGCIWFNRT 216 (376)
T ss_pred EEEECCcCCCC-CCEEEEECCCCh-HHHHHHHhhc----C--ceEEEEehhh------hhH-HHHHHHHHHcCcEEecCC
Confidence 56789887764 689999999988 7998876652 1 1122322221 122 345678999999999884
Q ss_pred h----------HHHHhc--CCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhhhhcC
Q 004396 566 N----------LFKLLS--TKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLD 633 (756)
Q Consensus 566 ~----------~~~~l~--~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~~~ 633 (756)
+ +.+.++ +|..|+|||||||+. ++ .+ .++|+|++ +.|+||+||++.......+..++
T Consensus 217 ~~~~~~~~~~~l~~~l~~~~G~~llIFPEGTrs~----~~--~l-~~FK~Gaf----~~g~pI~PVaI~y~~~~~~~fW~ 285 (376)
T PLN02833 217 EAKDREVVAKKLRDHVQDPDRNPLLIFPEGTCVN----NE--YT-VMFKKGAF----ELGCTVCPIAIKYNKIFVDAFWN 285 (376)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC----CC--cc-cccchhhH----hcCCeEEEEEEEecCcccccccC
Confidence 3 122233 699999999999853 22 23 38999975 46999999999744321111111
Q ss_pred ccccccccchHHHHHHhhcccccccccccccccccccccCccCCCCCceEEEEeCCcccCCCCCCcCCCHHHHHHHHHHH
Q 004396 634 YKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGREVSLKDKENANELYLHI 713 (756)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~~p~~p~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~v 713 (756)
.. +..++..+.+ ++...+..+.+.|++||+.... ++.+++.+++
T Consensus 286 s~---~~s~~~~l~~--------------------------ll~~~~~~v~V~~LpPi~~~~~-------e~~~efA~rv 329 (376)
T PLN02833 286 SR---KQSFTMHLLR--------------------------LMTSWAVVCDVWYLEPQTLRPG-------ETPIEFAERV 329 (376)
T ss_pred CC---CccHHHhHHH--------------------------HhCCCceEEEEEECCCcCCCCC-------CCHHHHHHHH
Confidence 00 0011112222 1233467899999999987521 2345555566
Q ss_pred HHHHHHH
Q 004396 714 KSQVERC 720 (756)
Q Consensus 714 ~~~v~~~ 720 (756)
+++|.+.
T Consensus 330 ~~~Ia~~ 336 (376)
T PLN02833 330 RDMIAKR 336 (376)
T ss_pred HHHHHHh
Confidence 5555554
|
|
| >PRK04974 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.50 E-value=1e-13 Score=161.54 Aligned_cols=123 Identities=17% Similarity=0.149 Sum_probs=96.3
Q ss_pred cccCcEEecccCCCC---C-CCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHc
Q 004396 482 LEDGKIVKGLAGVPN---E-GPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVM 557 (756)
Q Consensus 482 ~~~~~~v~g~~~lp~---~-gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~ 557 (756)
+++|+.|.|.|+||+ + .|+|||+||.+. +|.+++...+. ..+..+..+|....|.. |+++++++..
T Consensus 282 ly~~i~V~g~e~L~~~~~~~~~vI~v~NHrS~-lD~llL~~~l~-~~gl~~p~iAagenl~~--------p~lg~llr~~ 351 (818)
T PRK04974 282 LYQGINVHNAERVRQLAQDGHEIVYVPCHRSH-MDYLLLSYVLY-HQGLVPPHIAAGINLNF--------WPAGPIFRRG 351 (818)
T ss_pred HhCceEEcchhhhhhcccCCCCEEEEeCCCCc-hHHHHHHHHHh-hcCCCCceEEehHHhcc--------hHHHHHHHHC
Confidence 346788999999994 4 499999999986 79977776654 44555555665555654 6889999999
Q ss_pred CccccCHHh-------------HHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHc-------CCcee
Q 004396 558 GAVPVAARN-------------LFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARF-------GATIV 617 (756)
Q Consensus 558 g~v~v~~~~-------------~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~-------g~~IV 617 (756)
|+++|.|+. +.+++++|.+|.|||||+|+.. + ++. |.|.|.++||.++ +++||
T Consensus 352 GaffIrR~~~~~~ly~~vl~~yi~~ll~~G~~v~iFpEGtRSRt----G--kll-ppK~G~l~~a~~a~~~~~~~dv~IV 424 (818)
T PRK04974 352 GAFFIRRSFKGNKLYSTVFREYLGELFARGYSVEYFVEGGRSRT----G--RLL-QPKTGMLAMTLQAMLRGSRRPITLV 424 (818)
T ss_pred CceEeeCCCCchHHHHHHHHHHHHHHHhCCCEEEEEcCCCcCCC----C--CCc-chhhhHHHHHHHHhhcccCCCcEEE
Confidence 999998852 2357889999999999999632 2 333 8899999999987 48999
Q ss_pred eeee
Q 004396 618 PFGA 621 (756)
Q Consensus 618 Pv~~ 621 (756)
||++
T Consensus 425 PVsI 428 (818)
T PRK04974 425 PVYI 428 (818)
T ss_pred EEEE
Confidence 9988
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.2e-13 Score=142.36 Aligned_cols=246 Identities=19% Similarity=0.251 Sum_probs=145.3
Q ss_pred cccccCCCCC--ceeeeeccC-C-CCCCCCCEEEEECCCCCchh-hH-HHhHhhh-cCCcEEEEeccCCCCCCC------
Q 004396 154 KEIIKPDGGP--PRWFCPVDC-G-RPLKGSPTLLFLPGIDGLGL-GL-ILHHKPL-GKAFEVRCLHIPVYDRTP------ 220 (756)
Q Consensus 154 ~~~~~~dg~~--~~~~~~~~~-G-~~~~~~p~lV~lHG~~~s~~-~~-~~~~~~L-~~gy~Vi~~Dl~G~G~Ss------ 220 (756)
+.+..+||+. ..|+..... . ....+.|.||++||+.+++. .| +.++..+ .+||+|++++.||+|++.
T Consensus 96 eii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~ 175 (409)
T KOG1838|consen 96 EIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRL 175 (409)
T ss_pred EEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCce
Confidence 3445778876 345533222 1 11235799999999965554 44 3344333 789999999999999883
Q ss_pred -hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCC---CcceEEEEeCCCCcCCcCC--cCCchhHHhhc
Q 004396 221 -FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPATSFGRSQ--LQPLFPILKAM 294 (756)
Q Consensus 221 -~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P---~~v~~lVLi~p~~~~~~~~--~~~~~~~~~~~ 294 (756)
-..+.+|+.+++++++..+|..+.+.+|.||||.+.+.+..+.. ..+.++.+.+|+..+.... .... .
T Consensus 176 f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~------~ 249 (409)
T KOG1838|consen 176 FTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPL------Y 249 (409)
T ss_pred eecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhccc------c
Confidence 34568899999999999999999999999999999999997754 3577788888866331110 0000 0
Q ss_pred hhHHHHhHHhHhh--------hhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH
Q 004396 295 PDELHCAVPYLLS--------YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS 366 (756)
Q Consensus 295 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (756)
.......+..-+. .+..+..... ..... ....++.+.+... . +.-+.. ...++.
T Consensus 250 ~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d---~~~~~---~SvreFD~~~t~~-------~--~gf~~~---deYY~~ 311 (409)
T KOG1838|consen 250 RRFYNRALTLNLKRIVLRHRHTLFEDPVDFD---VILKS---RSVREFDEALTRP-------M--FGFKSV---DEYYKK 311 (409)
T ss_pred hHHHHHHHHHhHHHHHhhhhhhhhhccchhh---hhhhc---CcHHHHHhhhhhh-------h--cCCCcH---HHHHhh
Confidence 0011111111000 0111110000 00000 1112222211110 0 000000 011111
Q ss_pred HHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccc
Q 004396 367 ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEE 425 (756)
Q Consensus 367 ~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~ 425 (756)
+.....+.+|++|+|+|++.+|+++|...--.......|++-+.+-.-+||..++|.
T Consensus 312 --aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 312 --ASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred --cchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 112377899999999999999999999632344456678888888888999999987
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.9e-13 Score=139.95 Aligned_cols=99 Identities=19% Similarity=0.194 Sum_probs=83.8
Q ss_pred CCEEEEECCCCCc----hhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCCCCCEEE
Q 004396 179 SPTLLFLPGIDGL----GLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYL 246 (756)
Q Consensus 179 ~p~lV~lHG~~~s----~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~L 246 (756)
.++|||+||+++. ...|..+++.| ..+|.|+++|+||||.| +++++++|+..+++.+... +..+++|
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v~L 103 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHPPVTL 103 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCCCEEE
Confidence 5789999999864 34577778888 57899999999999988 3677889988887776543 3468999
Q ss_pred EEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 247 VGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 247 vGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
+||||||.+++.+|.++|+.++++|+++|..+
T Consensus 104 vG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 104 WGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 99999999999999999999999999998653
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-13 Score=131.28 Aligned_cols=182 Identities=19% Similarity=0.221 Sum_probs=131.4
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh--cCCcEEEEeccCCCCCC----ChhHHHHHHHHHHHHhhcc--CCCCCEEEEEe
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL--GKAFEVRCLHIPVYDRT----PFEGLVKFVEETVRREHAS--SPEKPIYLVGD 249 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L--~~gy~Vi~~Dl~G~G~S----s~~~~a~dv~~~i~~l~~~--~~~~~v~LvGh 249 (756)
..|+++++||..|+-....+.+.-+ .-+..|+.+++||+|.| +-+.+.-|-+++++++..+ ....+++|.|.
T Consensus 77 S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfGr 156 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGR 156 (300)
T ss_pred CCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEec
Confidence 4899999999999988877777665 45789999999999999 3555666777777776543 33578999999
Q ss_pred ChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHH
Q 004396 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (756)
Q Consensus 250 S~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (756)
|+||++|+.+|+++.+++.++|+-+...+..........++. ...++.+.
T Consensus 157 SlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~-------~k~i~~lc----------------------- 206 (300)
T KOG4391|consen 157 SLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFP-------MKYIPLLC----------------------- 206 (300)
T ss_pred ccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccch-------hhHHHHHH-----------------------
Confidence 999999999999999999999999875543222111111100 00000000
Q ss_pred HHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC--
Q 004396 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-- 407 (756)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~-- 407 (756)
.+..+. ....+...+.|.|+|.|.+|.++|+.. .+.+.+.+|
T Consensus 207 -~kn~~~----------------------------------S~~ki~~~~~P~LFiSGlkDelVPP~~-Mr~Ly~~c~S~ 250 (300)
T KOG4391|consen 207 -YKNKWL----------------------------------SYRKIGQCRMPFLFISGLKDELVPPVM-MRQLYELCPSR 250 (300)
T ss_pred -HHhhhc----------------------------------chhhhccccCceEEeecCccccCCcHH-HHHHHHhCchh
Confidence 000000 013345678899999999999999996 999999998
Q ss_pred CeEEEEEcCCCCcccccc
Q 004396 408 NCIVRNFKDNGHTLLLEE 425 (756)
Q Consensus 408 ~~~l~~i~~aGH~~~~e~ 425 (756)
+.++..||++.|.-.+-.
T Consensus 251 ~Krl~eFP~gtHNDT~i~ 268 (300)
T KOG4391|consen 251 TKRLAEFPDGTHNDTWIC 268 (300)
T ss_pred hhhheeCCCCccCceEEe
Confidence 568999999999765543
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.2e-12 Score=158.76 Aligned_cols=112 Identities=13% Similarity=0.038 Sum_probs=79.1
Q ss_pred ceeeeeccCCCC---CCCCCEEEEECCCCCchhhHHHh-----Hhhh-cCCcEEEEeccCCCCCC---------ChhHHH
Q 004396 164 PRWFCPVDCGRP---LKGSPTLLFLPGIDGLGLGLILH-----HKPL-GKAFEVRCLHIPVYDRT---------PFEGLV 225 (756)
Q Consensus 164 ~~~~~~~~~G~~---~~~~p~lV~lHG~~~s~~~~~~~-----~~~L-~~gy~Vi~~Dl~G~G~S---------s~~~~a 225 (756)
.+.++|.+.... ...+++|||+||++.+...|... ++.| .++|+|+++|+ |.+ ++.+++
T Consensus 49 ~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i 125 (994)
T PRK07868 49 YRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHV 125 (994)
T ss_pred EEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHH
Confidence 345566443210 13568999999999999999875 6778 67899999995 333 344444
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC-CCcceEEEEeCCCCcC
Q 004396 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSF 279 (756)
Q Consensus 226 ~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~-P~~v~~lVLi~p~~~~ 279 (756)
..+.+.++.+.... .++++|+||||||.+++.+|+.+ +++|+++|++++...+
T Consensus 126 ~~l~~~l~~v~~~~-~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 126 VALSEAIDTVKDVT-GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDT 179 (994)
T ss_pred HHHHHHHHHHHHhh-CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccccc
Confidence 44455544432221 24899999999999999998755 4689999998887644
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.4e-12 Score=131.63 Aligned_cols=164 Identities=16% Similarity=0.166 Sum_probs=113.3
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcC-CcEEEEeccCCCC-------CC-------C-------hhHHHHHHHHHHHHh
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGK-AFEVRCLHIPVYD-------RT-------P-------FEGLVKFVEETVRRE 235 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~-gy~Vi~~Dl~G~G-------~S-------s-------~~~~a~dv~~~i~~l 235 (756)
..|+|||+||++++...|..+.+.|.+ .+.+..++.+|.. .+ + +.+..+.+.++++.+
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999953 3444455555431 11 0 122233344444443
Q ss_pred hccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCCh
Q 004396 236 HASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDP 313 (756)
Q Consensus 236 ~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (756)
.... ..++++|+|||+||.+++.++.++|+.+.++|.+++... ..+
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~--------------~~~------------------ 142 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA--------------SLP------------------ 142 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------------ccc------------------
Confidence 3222 245899999999999999999999988888877654110 000
Q ss_pred hHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCC
Q 004396 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNML 393 (756)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~v 393 (756)
.....+.|++++||++|.++
T Consensus 143 ------------------------------------------------------------~~~~~~~pvli~hG~~D~vv 162 (232)
T PRK11460 143 ------------------------------------------------------------ETAPTATTIHLIHGGEDPVI 162 (232)
T ss_pred ------------------------------------------------------------ccccCCCcEEEEecCCCCcc
Confidence 00113579999999999999
Q ss_pred CCHHHHHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 394 PSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 394 p~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
|.+. ++++.+.+. +++++.++++||.+..+.-+...+.+.
T Consensus 163 p~~~-~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 163 DVAH-AVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred CHHH-HHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 9995 888777664 568899999999997666666655554
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1e-12 Score=134.53 Aligned_cols=246 Identities=19% Similarity=0.268 Sum_probs=134.6
Q ss_pred cccccCCCCCc--eeeeeccCCCCCCCCCEEEEECCCCCchh-hH-HHhHhhh-cCCcEEEEeccCCCCCCC-------h
Q 004396 154 KEIIKPDGGPP--RWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GL-ILHHKPL-GKAFEVRCLHIPVYDRTP-------F 221 (756)
Q Consensus 154 ~~~~~~dg~~~--~~~~~~~~G~~~~~~p~lV~lHG~~~s~~-~~-~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-------~ 221 (756)
+.+...||+.+ .|... .. ....|.||++||+.|+.. .| +.+...+ .+||.|+++|+|||+.+. -
T Consensus 52 e~v~~pdg~~~~ldw~~~---p~-~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh 127 (345)
T COG0429 52 ERLETPDGGFIDLDWSED---PR-AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYH 127 (345)
T ss_pred EEEEcCCCCEEEEeeccC---cc-ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceec
Confidence 34556677653 33332 11 235789999999966554 44 4466677 789999999999999881 3
Q ss_pred hHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCC---CcceEEEEeCCCCcCCcC-C-c-CCch-hH-Hhh
Q 004396 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPATSFGRS-Q-L-QPLF-PI-LKA 293 (756)
Q Consensus 222 ~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P---~~v~~lVLi~p~~~~~~~-~-~-~~~~-~~-~~~ 293 (756)
..+.+|+..+++.+....+.++++.+|.|+||.+.+.+..+.. ...+++++.+|.. +... . . +... .+ ...
T Consensus 128 ~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~D-l~~~~~~l~~~~s~~ly~r~ 206 (345)
T COG0429 128 SGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFD-LEACAYRLDSGFSLRLYSRY 206 (345)
T ss_pred ccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHH-HHHHHHHhcCchhhhhhHHH
Confidence 4455899999999888888899999999999944444444332 2334444444422 1000 0 0 0000 00 000
Q ss_pred chhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHH--HhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHH
Q 004396 294 MPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQL--SNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA 371 (756)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (756)
+...+.......+..+ .... +....+.+ ...+..+...+. .+.-.+....+.++... .
T Consensus 207 l~~~L~~~~~~kl~~l------------~~~~-p~~~~~~ik~~~ti~eFD~~~T-----ap~~Gf~da~dYYr~aS--s 266 (345)
T COG0429 207 LLRNLKRNAARKLKEL------------EPSL-PGTVLAAIKRCRTIREFDDLLT-----APLHGFADAEDYYRQAS--S 266 (345)
T ss_pred HHHHHHHHHHHHHHhc------------Cccc-CcHHHHHHHhhchHHhccceee-----ecccCCCcHHHHHHhcc--c
Confidence 0011111111111111 0000 00001100 011111111100 00111111112222211 1
Q ss_pred hhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHH-hCCCeEEEEEcCCCCcccccc
Q 004396 372 NSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN-SLQNCIVRNFKDNGHTLLLEE 425 (756)
Q Consensus 372 ~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~-~l~~~~l~~i~~aGH~~~~e~ 425 (756)
...|.+|.+|+|+|++.+|++++++. ...... ..|+..+..-+-+||..++..
T Consensus 267 ~~~L~~Ir~PtLii~A~DDP~~~~~~-iP~~~~~~np~v~l~~t~~GGHvGfl~~ 320 (345)
T COG0429 267 LPLLPKIRKPTLIINAKDDPFMPPEV-IPKLQEMLNPNVLLQLTEHGGHVGFLGG 320 (345)
T ss_pred cccccccccceEEEecCCCCCCChhh-CCcchhcCCCceEEEeecCCceEEeccC
Confidence 37789999999999999999999974 655555 667899999999999999884
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.2e-13 Score=144.47 Aligned_cols=117 Identities=17% Similarity=0.184 Sum_probs=92.6
Q ss_pred cccCcEEecccCCCCC---CCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcC
Q 004396 482 LEDGKIVKGLAGVPNE---GPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMG 558 (756)
Q Consensus 482 ~~~~~~v~g~~~lp~~---gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g 558 (756)
.....+|+|.||+|.+ +|+|+|+||.++ +|.+++...+ ++.+++++ +| . +.+.+++...+
T Consensus 269 ~G~~v~V~G~e~~P~~~~~~gvL~v~NH~S~-lDp~~l~~al----~R~v~~va---y~-~--------~~ls~ll~~i~ 331 (498)
T PLN02499 269 FGGKVIVKGKPPPPASGGNSGVLFVCTHRTL-MDPVVLSTVL----GRSIPAVT---YS-I--------SRLSEILSPIP 331 (498)
T ss_pred cCceEEEEcCCCCCCcCCCCCEEEEeCCCCc-ccHHHHHHHc----CCceeehH---hh-H--------HHHHHHhcccC
Confidence 4467889999999976 799999999987 6998888874 46667776 33 2 46788899999
Q ss_pred ccccCHH------hHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccch
Q 004396 559 AVPVAAR------NLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDI 627 (756)
Q Consensus 559 ~v~v~~~------~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~ 627 (756)
++|++|+ ++.++|++|. |+|||||||.. + . . .+++++||+.+| +|||||++.-....
T Consensus 332 avrv~R~r~~d~~air~lL~~G~-lvIFPEGTrsr----e-g-~-LlrFk~l~aela----~pVVPVAI~~~~~~ 394 (498)
T PLN02499 332 TVRLTRIRDVDAEKIKRELARGD-LVVCPEGTTCR----E-P-F-LLRFSALFAELT----DRIVPVAMNYRVGF 394 (498)
T ss_pred eeeecCCchhHHHHHHHHhhCCC-EEEcCCCCCCC----C-C-c-ccccchhhhhhc----CceEeEEEEeccce
Confidence 9999885 4778999999 99999999842 2 1 2 338999999888 89999999544333
|
|
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.4e-13 Score=151.33 Aligned_cols=125 Identities=13% Similarity=0.144 Sum_probs=95.7
Q ss_pred ecccCcEEe--ccc------CCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHH
Q 004396 481 TLEDGKIVK--GLA------GVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTD 552 (756)
Q Consensus 481 t~~~~~~v~--g~~------~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~ 552 (756)
...+|+.+. |++ +.|+ .|+|||+||.++ +|.+++...+...--..++++|...+|.. |++++
T Consensus 605 rly~gI~V~~~~lerLr~~e~~p~-~pvVfVpNHRS~-lDyLLLsyvL~~~GL~~P~IAAGdNLL~~--------P~LG~ 674 (1108)
T PTZ00374 605 RLYDRVSLNSGAFERLHRYVAMPR-VAVVLLPLHRSY-IDFIIMTYLLAVMGLPLPHVCAGDDFLRM--------GPIAT 674 (1108)
T ss_pred HhcCCEEECcHHHHHHHHHhcCCC-CcEEEEeCCccc-hHHHHHHHHHHhCCCCceEEEEchhhhcc--------hHHHH
Confidence 344566665 244 4464 599999999987 58877766654333256789999998876 68999
Q ss_pred HHHHcCccccCHHh-------------HHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHc-------
Q 004396 553 WLKVMGAVPVAARN-------------LFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARF------- 612 (756)
Q Consensus 553 ~~~~~g~v~v~~~~-------------~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~------- 612 (756)
+++..|+++|.|+. ...+|++|.+|.+||||+|+.. + ++. +.|.|..+|+.++
T Consensus 675 LLR~~GAFFIRRsf~~d~LYsAVLreYI~~LLk~G~sVeiFpEGTRSRT----G--KLL-pPK~GlLkmalda~l~g~~~ 747 (1108)
T PTZ00374 675 LMRGSGAFFMRRSFRDDPLYAALFKEYVRHLVLRRRPLEFFIEGTRSRT----G--KTM-APKLGLLKFICDTFYEGQQE 747 (1108)
T ss_pred HHHHCCeEEEeCCCCchHHHHHHHHHHHHHHHhCCCeEEEecCcCcCCC----C--Ccc-cchhhHHHHHHHHHhhcccC
Confidence 99999999998742 2457889999999999999632 2 333 6799999999977
Q ss_pred --CCceeeeeee
Q 004396 613 --GATIVPFGAV 622 (756)
Q Consensus 613 --g~~IVPv~~~ 622 (756)
+++||||+|.
T Consensus 748 v~dV~IVPVSIs 759 (1108)
T PTZ00374 748 LDDVLIIPVSLS 759 (1108)
T ss_pred CCCCEEEEEEEe
Confidence 8999999995
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.9e-12 Score=134.41 Aligned_cols=101 Identities=20% Similarity=0.121 Sum_probs=74.3
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhc----------cCCCCCEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHA----------SSPEKPIYL 246 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~----------~~~~~~v~L 246 (756)
+.|+|||+||++.+...|..+++.| +.||.|+++|++|++.++.....++..++++.+.. ....+++++
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l 130 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLAL 130 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheEE
Confidence 4799999999999999999999999 56899999999987654221112222222222111 112258999
Q ss_pred EEeChhhHHHHHHHHhCCC-----cceEEEEeCCCCc
Q 004396 247 VGDSFGGCLALAVAARNPT-----IDLILILSNPATS 278 (756)
Q Consensus 247 vGhS~GG~vAl~~A~~~P~-----~v~~lVLi~p~~~ 278 (756)
+||||||.+|+.+|..+++ .++++|+++|...
T Consensus 131 ~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 131 AGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred EEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 9999999999999998874 5789999998653
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-12 Score=145.90 Aligned_cols=122 Identities=17% Similarity=0.217 Sum_probs=89.2
Q ss_pred eeeecccCcEEecccCCCC---CCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH
Q 004396 478 MLSTLEDGKIVKGLAGVPN---EGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL 554 (756)
Q Consensus 478 ~~~t~~~~~~v~g~~~lp~---~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~ 554 (756)
++....-.++|+|.+|+|+ ++|+|+|+||+++ +|.+++...+ ++.+.+++. +. ..+.+++
T Consensus 278 ~~~~~Gv~v~v~G~e~~p~~~~~~~~l~v~NHqS~-lD~~~l~~al----~~~~~~v~~---~~---------~~l~~~l 340 (497)
T PLN02177 278 NYKLLGIRLIVKGNPPPPPKKGQPGVLFVCNHRTV-LDPVVTAVAL----GRKISCVTY---SI---------SKFSELI 340 (497)
T ss_pred HHHHcCcEEEEEcCCCCCcccCCCCeEEEECCCCc-chHHHHHHHc----CCCeEEEee---hH---------HHHHHHH
Confidence 3444445678899999995 3799999999987 6998877774 344555551 11 1357789
Q ss_pred HHcCccccCHHh------HHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchh
Q 004396 555 KVMGAVPVAARN------LFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIA 628 (756)
Q Consensus 555 ~~~g~v~v~~~~------~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~ 628 (756)
..+++++++|++ +.++|++| .++|||||||.. ++ .+. +++.+|+.++ .|||||++.|....+
T Consensus 341 ~~i~~~~ldR~r~~~~~~~~~lL~~g-~lvIFPEGTrs~----~~--~l~-~Fk~~fa~l~----~pIVPVAI~~~~~~f 408 (497)
T PLN02177 341 SPIKAVALSREREKDAANIKRLLEEG-DLVICPEGTTCR----EP--FLL-RFSALFAELT----DRIVPVAINTKQSMF 408 (497)
T ss_pred HhcCEEEEeCCChHHHHHHHHHHhcC-CEEECcCcCCCC----CC--Ccc-hHHHHHHHHC----CcEEEEEEEcccccc
Confidence 999999999843 44778888 588999999842 21 233 7788887777 599999999887664
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.5e-11 Score=119.79 Aligned_cols=212 Identities=17% Similarity=0.226 Sum_probs=136.1
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
.++.|+|+|=.|++...|+.....|.....++++++||+|.- +++++++.+...+.. ....+++.+.|||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~---~~~d~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLP---PLLDAPFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhcc---ccCCCCeeecccc
Confidence 367899999999999999999999988899999999999854 577777776666552 2445699999999
Q ss_pred hhhHHHHHHHHhCC---CcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCCh
Q 004396 251 FGGCLALAVAARNP---TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (756)
Q Consensus 251 ~GG~vAl~~A~~~P---~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (756)
|||.+|.++|.+.. ....++.+.+.... ....... .....+. ..+.. +..+. +.++
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP-~~~~~~~----i~~~~D~--~~l~~-l~~lg-------------G~p~ 141 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAP-HYDRGKQ----IHHLDDA--DFLAD-LVDLG-------------GTPP 141 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCC-CCcccCC----ccCCCHH--HHHHH-HHHhC-------------CCCh
Confidence 99999999997642 23556666554332 0100000 0111110 00000 11111 1110
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH----HHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHH
Q 004396 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS----ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLN 403 (756)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~ 403 (756)
+ +.+ .++-..+.+-.++. ...|....-..++||+.++.|++|..+..+. ...+.
T Consensus 142 -e----~le----------------d~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~-~~~W~ 199 (244)
T COG3208 142 -E----LLE----------------DPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDE-LGAWR 199 (244)
T ss_pred -H----Hhc----------------CHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHH-HHHHH
Confidence 0 000 01111111111211 1111113336789999999999999999985 88777
Q ss_pred HhCC-CeEEEEEcCCCCcccccchhhHHHHhhhc
Q 004396 404 NSLQ-NCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (756)
Q Consensus 404 ~~l~-~~~l~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (756)
+... ..++++++| |||.+.++.+++.+.|.+.
T Consensus 200 ~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~ 232 (244)
T COG3208 200 EHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQH 232 (244)
T ss_pred HhhcCCceEEEecC-cceehhhhHHHHHHHHHHH
Confidence 7776 789999995 9999999999999888844
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.38 E-value=3e-11 Score=127.47 Aligned_cols=113 Identities=14% Similarity=0.182 Sum_probs=77.8
Q ss_pred eeeeccCCCCCCCCCEEEEECCCCCchhhHHHhH---hhh-cCCcEEEEeccCCCC-----CC---------------C-
Q 004396 166 WFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH---KPL-GKAFEVRCLHIPVYD-----RT---------------P- 220 (756)
Q Consensus 166 ~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~---~~L-~~gy~Vi~~Dl~G~G-----~S---------------s- 220 (756)
+.-|.+.+.+.++.|+|+|+||++++...|.... ..+ ..++.|+.+|..++| .+ +
T Consensus 34 ~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 113 (283)
T PLN02442 34 FSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQ 113 (283)
T ss_pred EEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeecccc
Confidence 3334443332346899999999999887775432 344 458999999987655 10 0
Q ss_pred --------hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 221 --------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 221 --------~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
.+.+.+++...++........++++++||||||..|+.++.++|+.+++++.+++...
T Consensus 114 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 114 EKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred CCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 0113455555555532222345899999999999999999999999999999988653
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.2e-11 Score=128.75 Aligned_cols=267 Identities=18% Similarity=0.152 Sum_probs=160.4
Q ss_pred ceeeeeccCCCCCC-CCCEEEEECCCCCchhh-----------HHHhH---hhh-cCCcEEEEeccCCCC-CC-------
Q 004396 164 PRWFCPVDCGRPLK-GSPTLLFLPGIDGLGLG-----------LILHH---KPL-GKAFEVRCLHIPVYD-RT------- 219 (756)
Q Consensus 164 ~~~~~~~~~G~~~~-~~p~lV~lHG~~~s~~~-----------~~~~~---~~L-~~gy~Vi~~Dl~G~G-~S------- 219 (756)
..|+.|..+|..+. ....||++||+.++... |..++ +.+ ...|.|+|.|..|.+ .|
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 35788888887643 34589999999886543 23332 234 357999999998876 33
Q ss_pred -------------ChhHHHHHHHHHHHHhhccCCCCCEE-EEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcC
Q 004396 220 -------------PFEGLVKFVEETVRREHASSPEKPIY-LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQ 285 (756)
Q Consensus 220 -------------s~~~~a~dv~~~i~~l~~~~~~~~v~-LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~ 285 (756)
++.|++..-..++++++++ ++. +||-||||+.|++++..+|+.|..+|.++++.........
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~----~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia 190 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDALGIK----KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIA 190 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhcCcc----eEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHH
Confidence 3678888888888998877 665 8999999999999999999999999998875532111100
Q ss_pred --Cch-hHHhhchhH------------HHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHH-HHHhhhhhhh-hhhhhh
Q 004396 286 --PLF-PILKAMPDE------------LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLE-QLSNNLPALL-PRLSVM 348 (756)
Q Consensus 286 --~~~-~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~ 348 (756)
... ..+..-|.+ -...+...+..+...........+.+......... ........++ ......
T Consensus 191 ~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf 270 (368)
T COG2021 191 FNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKF 270 (368)
T ss_pred HHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHH
Confidence 000 000011111 00011111111111110000111111000000000 0000011111 111233
Q ss_pred hccCChhhHHHHHHHHHHHHH-----HHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeE-EEEE-cCCCCcc
Q 004396 349 SDIIPKDTLLWKLKLLKSASA-----YANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI-VRNF-KDNGHTL 421 (756)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~-l~~i-~~aGH~~ 421 (756)
...++..++.+..+.+...+. ++...|.+|++|+|++.-+.|.+.|++. .+.+.+.++.+. ++++ ...||..
T Consensus 271 ~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~-~~~~~~~L~~~~~~~~i~S~~GHDa 349 (368)
T COG2021 271 VARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPEL-QRALAEALPAAGALREIDSPYGHDA 349 (368)
T ss_pred HhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHH-HHHHHHhccccCceEEecCCCCchh
Confidence 444666677766666554322 2335688999999999999999999994 999999999776 6666 4579999
Q ss_pred cccchhhHHHHhhh
Q 004396 422 LLEEGISLLTIIKG 435 (756)
Q Consensus 422 ~~e~p~~~~~~I~~ 435 (756)
++...+.+...|.+
T Consensus 350 FL~e~~~~~~~i~~ 363 (368)
T COG2021 350 FLVESEAVGPLIRK 363 (368)
T ss_pred hhcchhhhhHHHHH
Confidence 99999998888873
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.9e-11 Score=125.46 Aligned_cols=117 Identities=15% Similarity=0.163 Sum_probs=80.0
Q ss_pred CCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHh--Hhhh--cCCcEEEEecc--CCCCCCC--------------
Q 004396 161 GGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILH--HKPL--GKAFEVRCLHI--PVYDRTP-------------- 220 (756)
Q Consensus 161 g~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~--~~~L--~~gy~Vi~~Dl--~G~G~Ss-------------- 220 (756)
+.+..+.-|.+.+...++.|+|+|+||++++...|... +..+ ..++.|+++|. +|+|.+.
T Consensus 24 ~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~ 103 (275)
T TIGR02821 24 GVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFY 103 (275)
T ss_pred CCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcccc
Confidence 33433344444332123479999999999999888543 3455 24899999998 5554211
Q ss_pred --------------hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 221 --------------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 221 --------------~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
...+++++..+++.... ...++++++||||||.+|+.++.++|+.+.++++++|...
T Consensus 104 ~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 104 VDATEEPWSQHYRMYSYIVQELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred ccCCcCcccccchHHHHHHHHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 12234566666665211 1234899999999999999999999999999999988653
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.9e-11 Score=123.19 Aligned_cols=236 Identities=17% Similarity=0.180 Sum_probs=138.0
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhh-HHHhH-----hhhcCCcEEEEeccCCCCCC-----------ChhHHHHHHH
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLG-LILHH-----KPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVE 229 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~-~~~~~-----~~L~~gy~Vi~~Dl~G~G~S-----------s~~~~a~dv~ 229 (756)
+++.-+|++..++|++|-.|-.|.+..+ |..+. +.+.+.|.++-+|.||+..- |++++++++.
T Consensus 11 v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~ 90 (283)
T PF03096_consen 11 VHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLP 90 (283)
T ss_dssp EEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHH
T ss_pred EEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHH
Confidence 3666677765579999999999999887 66644 45578999999999999643 6999999999
Q ss_pred HHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch--hHHh------hchhHHHHh
Q 004396 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF--PILK------AMPDELHCA 301 (756)
Q Consensus 230 ~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~--~~~~------~~~~~~~~~ 301 (756)
+++++++.+ .++-+|--.||.|.+.+|.++|++|.|+||++|.... ..|..+. .+.. .+....
T Consensus 91 ~Vl~~f~lk----~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~--~gw~Ew~~~K~~~~~L~~~gmt~~~--- 161 (283)
T PF03096_consen 91 EVLDHFGLK----SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA--AGWMEWFYQKLSSWLLYSYGMTSSV--- 161 (283)
T ss_dssp HHHHHHT-------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----HHHHHHHHHH-------CTTS-H---
T ss_pred HHHHhCCcc----EEEEEeeccchhhhhhccccCccceeEEEEEecCCCC--ccHHHHHHHHHhcccccccccccch---
Confidence 999999887 8999999999999999999999999999999996532 1111110 0000 000000
Q ss_pred HHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCc
Q 004396 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAE 381 (756)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 381 (756)
...++...++..... . ..+..+.+.. .+.....+..+...++.+... .++...+....||
T Consensus 162 ~d~Ll~h~Fg~~~~~------~---n~Dlv~~yr~----------~l~~~~Np~Nl~~f~~sy~~R-~DL~~~~~~~~c~ 221 (283)
T PF03096_consen 162 KDYLLWHYFGKEEEE------N---NSDLVQTYRQ----------HLDERINPKNLALFLNSYNSR-TDLSIERPSLGCP 221 (283)
T ss_dssp HHHHHHHHS-HHHHH------C---T-HHHHHHHH----------HHHT-TTHHHHHHHHHHHHT------SECTTCCS-
T ss_pred HHhhhhccccccccc------c---cHHHHHHHHH----------HHhcCCCHHHHHHHHHHHhcc-ccchhhcCCCCCC
Confidence 011111111111000 0 0011111111 111223334444444444322 2234566778899
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhCC--CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 382 VLVLASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 382 vLvI~G~~D~~vp~~~~~~~l~~~l~--~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
+|++.|+..+.... +..+...+. +.++..++++|=.++.|+|..+++.++
T Consensus 222 vLlvvG~~Sp~~~~---vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~ 273 (283)
T PF03096_consen 222 VLLVVGDNSPHVDD---VVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFK 273 (283)
T ss_dssp EEEEEETTSTTHHH---HHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHH
T ss_pred eEEEEecCCcchhh---HHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHH
Confidence 99999998877633 556666663 679999999999999999999999887
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.9e-12 Score=125.64 Aligned_cols=120 Identities=19% Similarity=0.130 Sum_probs=84.6
Q ss_pred CcEEecccCCCC----CCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHH----H
Q 004396 485 GKIVKGLAGVPN----EGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLK----V 556 (756)
Q Consensus 485 ~~~v~g~~~lp~----~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~----~ 556 (756)
.++++|.|+++. ++|+|+++||... +|.+...... .+..+..++++. .. +.+..+++ .
T Consensus 3 ~~~i~~~e~l~~~~~~~~~~il~~~H~g~-~e~~~~~~~~---~~~~~~~v~~~~--~~--------~~~~~~~~~~r~~ 68 (192)
T cd07984 3 RVEREGLEHLEAALAKGKGVILLTAHFGN-WELAGLALAL---LGYPVTVVYRPL--KN--------PLLDRLITRGRER 68 (192)
T ss_pred eeEecCHHHHHHHHHcCCCEEEEcccchH-HHHHHHHHHh---cCCCeeEEEECC--CC--------HHHHHHHHHHHHh
Confidence 456889888884 5899999999854 5876654443 234455565543 11 34555554 5
Q ss_pred cCccccCHH----hHHHHhcCCCeEEEEeCcchhccccCCcceeE-----EcCCchhHHHHHHHcCCceeeeeee
Q 004396 557 MGAVPVAAR----NLFKLLSTKSHVLLYPGGAREALHYKGEEYKL-----FWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 557 ~g~v~v~~~----~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l-----~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
.|+.+++++ .+.+.|++|+.|+|||+|+++... ...+ .-+.+.|+++||.++|+||||+++.
T Consensus 69 ~g~~~i~~~~~~~~~~~~l~~g~~v~i~pD~~~~~~~----~~~~~F~G~~~~~~~G~~~lA~~~~~pivp~~~~ 139 (192)
T cd07984 69 FGARLIPRGGGLRELIRALKKGEIVGILPDQDPGRKG----GVFVPFFGRPAATPTGPARLALKTGAPVVPAFAY 139 (192)
T ss_pred cCCeeEcCCchHHHHHHHHhCCCEEEEEeCCCCCCCC----CEEeccCCCCccchHHHHHHHHHHCCcEEEEEEE
Confidence 688888763 567889999999999999985321 1111 1145899999999999999999995
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins. |
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.3e-10 Score=116.76 Aligned_cols=93 Identities=23% Similarity=0.240 Sum_probs=84.0
Q ss_pred CEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 180 PTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
.+||=+||.+|+...|+.+.+.| ..+.+++++.+||+|.+ +-++-..-+.++++.+... .+++.+|||
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~---~~~i~~gHS 112 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK---GKLIFLGHS 112 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC---CceEEEEec
Confidence 38999999999999999999999 78999999999999988 4677788889999998876 489999999
Q ss_pred hhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 251 FGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 251 ~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
.||-.|+.+|..+| ..|++|++|..
T Consensus 113 rGcenal~la~~~~--~~g~~lin~~G 137 (297)
T PF06342_consen 113 RGCENALQLAVTHP--LHGLVLINPPG 137 (297)
T ss_pred cchHHHHHHHhcCc--cceEEEecCCc
Confidence 99999999999995 56999999966
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=4e-11 Score=114.35 Aligned_cols=201 Identities=11% Similarity=0.111 Sum_probs=124.5
Q ss_pred CCEEEEECCCCCchh--hHHHhHhhh-cCCcEEEEeccCCCCCCC-------hhHHHHHHHHHHHHhhccCCCCC-EEEE
Q 004396 179 SPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHASSPEKP-IYLV 247 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~--~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-------~~~~a~dv~~~i~~l~~~~~~~~-v~Lv 247 (756)
...+|++||+-++.. ....++.+| ..++.++.+|++|.|.|+ ....++|+..+++++... ++- -+++
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~--nr~v~vi~ 110 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS--NRVVPVIL 110 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC--ceEEEEEE
Confidence 678999999977654 456677888 678999999999999992 666789999999987643 222 2678
Q ss_pred EeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCCh
Q 004396 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (756)
|||-||.+++.+|.++++ +.-+|-+++.. ...... -..+......++.. -.++-..+ .++.
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNcsGRy--dl~~~I-----~eRlg~~~l~~ike-~Gfid~~~--------rkG~-- 171 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD-IRNVINCSGRY--DLKNGI-----NERLGEDYLERIKE-QGFIDVGP--------RKGK-- 171 (269)
T ss_pred eecCccHHHHHHHHhhcC-chheEEccccc--chhcch-----hhhhcccHHHHHHh-CCceecCc--------ccCC--
Confidence 999999999999999977 44455444322 111100 00000000000000 00000000 0000
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhc--cCCCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q 004396 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL--HAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405 (756)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~ 405 (756)
....+..+.+... ...++-+.. -..+||||-+||..|.++|.++ +..+++.
T Consensus 172 --------------------y~~rvt~eSlmdr------Lntd~h~aclkId~~C~VLTvhGs~D~IVPve~-AkefAk~ 224 (269)
T KOG4667|consen 172 --------------------YGYRVTEESLMDR------LNTDIHEACLKIDKQCRVLTVHGSEDEIVPVED-AKEFAKI 224 (269)
T ss_pred --------------------cCceecHHHHHHH------HhchhhhhhcCcCccCceEEEeccCCceeechh-HHHHHHh
Confidence 0000111111111 111111222 2347999999999999999995 9999999
Q ss_pred CCCeEEEEEcCCCCcccccchh
Q 004396 406 LQNCIVRNFKDNGHTLLLEEGI 427 (756)
Q Consensus 406 l~~~~l~~i~~aGH~~~~e~p~ 427 (756)
+|+-++++++|+.|.....+.+
T Consensus 225 i~nH~L~iIEgADHnyt~~q~~ 246 (269)
T KOG4667|consen 225 IPNHKLEIIEGADHNYTGHQSQ 246 (269)
T ss_pred ccCCceEEecCCCcCccchhhh
Confidence 9999999999999987655443
|
|
| >smart00563 PlsC Phosphate acyltransferases | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.5e-12 Score=115.59 Aligned_cols=107 Identities=27% Similarity=0.382 Sum_probs=86.7
Q ss_pred EEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCHHh----------HHH
Q 004396 500 VLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARN----------LFK 569 (756)
Q Consensus 500 ~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~~~----------~~~ 569 (756)
+|+++||++. +|.+++...+.+ .++..++++++.++.. |+++.++...|+++++|.. +.+
T Consensus 1 ~i~v~NH~s~-~D~~~l~~~~~~-~~~~~~~~~~~~~~~~--------p~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~ 70 (118)
T smart00563 1 ALVVANHQSF-LDPLVLSALLPR-KGGRVRFVAKKELFYV--------PLLGWLLRLLGAIFIDRENGRLARAALREAVR 70 (118)
T ss_pred CEEEECCCch-HHHHHHHHHccc-ccCceEEEeHHHHhhc--------cHHHHHHHHCCCeEEeCCCcHHHHHHHHHHHH
Confidence 4899999985 799888777543 3357888999888876 5788999999999997632 456
Q ss_pred HhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeec
Q 004396 570 LLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVG 623 (756)
Q Consensus 570 ~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G 623 (756)
.+++|..++|||||++.... . ..++++|++++|.+++++|+|+++.|
T Consensus 71 ~l~~~~~~~ifPeG~~~~~~------~-~~~~~~g~~~la~~~~~~v~Pv~~~~ 117 (118)
T smart00563 71 LLRDGGWLLIFPEGTRSRPG------K-LLPFKKGAARLALEAGVPIVPVAIRG 117 (118)
T ss_pred HHhCCCEEEEeCCcccCCCC------C-cCCCcccHHHHHHHcCCCEEeEEEec
Confidence 78889999999999974322 2 33889999999999999999999965
|
Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family. |
| >KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.2e-12 Score=126.77 Aligned_cols=172 Identities=20% Similarity=0.193 Sum_probs=125.9
Q ss_pred hhhhhccceeeeecccCcEEecccC-------CCCCCCEEEEecCCCchhhHHHHHH-----HHHHhcCceecccccccc
Q 004396 469 LLRVASSSVMLSTLEDGKIVKGLAG-------VPNEGPVLLVGYHMLLGFELYSLVE-----EFLREKNIMVHGIAHPEI 536 (756)
Q Consensus 469 ~~r~~~~~~~~~t~~~~~~v~g~~~-------lp~~gp~l~v~NH~~~~~d~~~l~~-----~~~~~~~~~~r~la~~~~ 536 (756)
.....++.+++-++.|...+.+.|. =|+..|.|-|+||++. +|.+.+.. .+......+....||..-
T Consensus 33 ~lv~~~sk~v~~~g~Nk~~v~n~e~l~~l~~~Rp~n~PLiTVSNH~S~-vDDP~~W~~L~~~~f~~~~~~RWtlaAhdIC 111 (286)
T KOG2847|consen 33 SLVGGVSKLVLMTGYNKLLVHNRETLTALLESRPPNRPLITVSNHMSC-VDDPLVWGILKLRLFLNLKNIRWTLAAHDIC 111 (286)
T ss_pred HHHHHHHHHHHHhcccccccccHHHHHHHHHcCCCCCCeEEEecchhc-cCCceeEEEechhhhcchhhhheehhhhhch
Confidence 4445556666667778888888764 4778899999999965 46655432 223333566777899999
Q ss_pred ccccccccCCCccHHHHHHHcCccccCHH---------hHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHH
Q 004396 537 FLGRLENSSNEFGMTDWLKVMGAVPVAAR---------NLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVR 607 (756)
Q Consensus 537 f~~~~~~~~p~~~~~~~~~~~g~v~v~~~---------~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~r 607 (756)
|++ ++...+++...++|+.|. -|.+.|..|.-|-|||||.+.. .+ +-+..+|-|..|
T Consensus 112 F~n--------~~~S~fFslGkclPi~RG~GvYQ~gmd~~i~kLn~g~WVHiFPEGkV~q----~~--~~~~rfKWGigR 177 (286)
T KOG2847|consen 112 FTN--------PFHSNFFSLGKCLPIVRGEGVYQKGMDFAIEKLNDGSWVHIFPEGKVNQ----ME--KEMLRFKWGIGR 177 (286)
T ss_pred hcc--------HHHHHHHhcCceEeeeccCccccccHHHHHHhcCCCCeEEECCCceeec----cc--cchhheecccee
Confidence 998 678889999999999994 4788999999999999998743 11 223367789999
Q ss_pred HHHHcCCc--eeeeeeecccchhhhhcCccccccccchHHHHHHhhcccccccccccccccccccccCccCCCCCceEEE
Q 004396 608 MAARFGAT--IVPFGAVGEDDIADLVLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYY 685 (756)
Q Consensus 608 lA~~~g~~--IVPv~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~~p~~p~~~~~ 685 (756)
|..++..+ |+|+...|-+|+++... -..|++...+++
T Consensus 178 lI~ea~~~PIVlPi~h~Gmedi~P~~~-----------------------------------------p~vp~~Gk~vtV 216 (286)
T KOG2847|consen 178 LILEAPKPPIVLPIWHTGMEDIMPEAP-----------------------------------------PYVPRFGKTVTV 216 (286)
T ss_pred eeecCCCCCEEeehhhhhHHHhCccCC-----------------------------------------CccCCCCCEEEE
Confidence 99988653 67999998888842211 013445568999
Q ss_pred EeCCcccCCCC
Q 004396 686 LFGKPIQTKGR 696 (756)
Q Consensus 686 ~~G~PI~~~~~ 696 (756)
.+|+||+....
T Consensus 217 ~IG~P~~~~d~ 227 (286)
T KOG2847|consen 217 TIGDPINFDDV 227 (286)
T ss_pred EeCCCcchhHH
Confidence 99999998743
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.1e-10 Score=116.83 Aligned_cols=247 Identities=13% Similarity=0.118 Sum_probs=156.5
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhh-HHHhH-----hhhcCCcEEEEeccCCCCCC---------
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLG-LILHH-----KPLGKAFEVRCLHIPVYDRT--------- 219 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~-~~~~~-----~~L~~gy~Vi~~Dl~G~G~S--------- 219 (756)
.+.+..|. +++.-+|++..++|.+|=.|.++.+..+ |..+. ..+...|.|+-+|.|||-.-
T Consensus 26 ~V~T~~G~----v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~ 101 (326)
T KOG2931|consen 26 DVETAHGV----VHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYP 101 (326)
T ss_pred eecccccc----EEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCC
Confidence 34444444 3777788876678999999999999887 66544 45555699999999999532
Q ss_pred --ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch--hHHhhch
Q 004396 220 --PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF--PILKAMP 295 (756)
Q Consensus 220 --s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~--~~~~~~~ 295 (756)
|++++++++..++++++.+ .++-+|.-.|+.|...+|..||++|.|+||+++.... ..|..+. .+...+-
T Consensus 102 yPsmd~LAd~l~~VL~~f~lk----~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a--~gwiew~~~K~~s~~l 175 (326)
T KOG2931|consen 102 YPSMDDLADMLPEVLDHFGLK----SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA--KGWIEWAYNKVSSNLL 175 (326)
T ss_pred CCCHHHHHHHHHHHHHhcCcc----eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC--chHHHHHHHHHHHHHH
Confidence 7999999999999998877 7899999999999999999999999999999985532 1222111 0000000
Q ss_pred ---hHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHh
Q 004396 296 ---DELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYAN 372 (756)
Q Consensus 296 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (756)
.........++...++.... .. ..++.+.+.. .+.....+..+.-.+..+....+ +.
T Consensus 176 ~~~Gmt~~~~d~ll~H~Fg~e~~---------~~----~~diVq~Yr~------~l~~~~N~~Nl~~fl~ayn~R~D-L~ 235 (326)
T KOG2931|consen 176 YYYGMTQGVKDYLLAHHFGKEEL---------GN----NSDIVQEYRQ------HLGERLNPKNLALFLNAYNGRRD-LS 235 (326)
T ss_pred HhhchhhhHHHHHHHHHhccccc---------cc----cHHHHHHHHH------HHHhcCChhHHHHHHHHhcCCCC-cc
Confidence 00001111122222222100 00 1122222211 11122333344434343332211 11
Q ss_pred hhc----cCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC--CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 373 SRL----HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 373 ~~l----~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~--~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
... ..++||+|++.|++.+.+.. ...+...+. +..+..+.++|-.+..++|..+++.++
T Consensus 236 ~~r~~~~~tlkc~vllvvGd~Sp~~~~---vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~ 300 (326)
T KOG2931|consen 236 IERPKLGTTLKCPVLLVVGDNSPHVSA---VVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFK 300 (326)
T ss_pred ccCCCcCccccccEEEEecCCCchhhh---hhhhhcccCcccceEEEEcccCCcccccCchHHHHHHH
Confidence 111 25569999999999887744 344455553 678899999999999999999999988
|
|
| >PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.1e-11 Score=126.63 Aligned_cols=202 Identities=16% Similarity=0.153 Sum_probs=124.3
Q ss_pred CcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhc-CceeccccccccccccccccCCCccHHHHHHHcCccccC
Q 004396 485 GKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREK-NIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVA 563 (756)
Q Consensus 485 ~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~-~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~ 563 (756)
.++++| |++|.++++|+++||++. +|.+++.....+.. -..++++++..++.. |++++.++.+|.++++
T Consensus 80 kv~v~G-e~l~~~~~~IiiaNH~S~-~D~l~l~~l~~r~~~~~~~kfv~K~eL~~i--------P~~Gw~~~~~g~I~v~ 149 (374)
T PLN02510 80 KVVFSG-DKVPPEERVLLIANHRTE-VDWMYLWDLALRKGCLGYIKYVLKSSLMKL--------PVFGWAFHIFEFIPVE 149 (374)
T ss_pred EEEEEe-ecCCCCCcEEEEECCCch-HHHHHHHHHHHhcCCCcccEEEEeHHHhhc--------hHHHHHHHHcCCeeee
Confidence 467889 899888999999999987 69877655443322 246888999999987 6889999999999999
Q ss_pred HH---------hHHHHhcCC---CeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhhhh
Q 004396 564 AR---------NLFKLLSTK---SHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLV 631 (756)
Q Consensus 564 ~~---------~~~~~l~~g---~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~ 631 (756)
|+ ++.+.++++ ..|+|||||||... ..+.++.++|.+.|+||+.-.+.-...
T Consensus 150 R~~~~D~~~l~~~l~~lk~~~~~~~LvIFPEGTR~t~-----------~~~~~s~~~A~k~glPil~~vL~PRt~----- 213 (374)
T PLN02510 150 RKWEVDEPNIRQMLSSFKDPRDPLWLALFPEGTDYTE-----------AKCQRSQKFAAEHGLPILNNVLLPKTK----- 213 (374)
T ss_pred CCccccHHHHHHHHHHHhccCCCcEEEEeCCcCCCCc-----------cccchHHHHHHHcCCCcceeEEcCccc-----
Confidence 74 233445543 57999999999421 224678999999999999877731111
Q ss_pred cCccccccccchHHHHHHhhcccccccccccccccccccccCcc-CCCCCceEEEEeCCcccCCCCCCcCCCHHHHHHHH
Q 004396 632 LDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGL-LPKVPGRFYYLFGKPIQTKGREVSLKDKENANELY 710 (756)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~-~p~~p~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~ 710 (756)
.+...++.+......+.|=.-+--.+.+. +..+ ....|.++.+++- .++.++.. .+++..++--
T Consensus 214 ----------Gf~~~l~~L~~~l~~IyDvTi~Y~~~~Ps-~~~~~~g~~p~~vhihvr-r~pi~~iP---~~~~~~~~WL 278 (374)
T PLN02510 214 ----------GFVSCLQELRCSLDAVYDVTIGYKHRCPS-FLDNVFGIDPSEVHIHIR-RIPLKQIP---TSEDEVSAWL 278 (374)
T ss_pred ----------cHHHHHHHHHHHHHhheeEEEEeCCCCCC-HHHHhcCCCCcEEEEEEE-EEECcccc---CcHHHHHHHH
Confidence 11111122211111121100000000000 0011 1213677888773 45554432 3455666666
Q ss_pred HHHHHHHHHHHHHHHHH
Q 004396 711 LHIKSQVERCLDYLLKK 727 (756)
Q Consensus 711 ~~v~~~v~~~~~~l~~~ 727 (756)
.+.=.+=+++|+++.+.
T Consensus 279 ~~~w~eKD~lL~~f~~~ 295 (374)
T PLN02510 279 MDRFQLKDQLLSDFYAQ 295 (374)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 66667777777777765
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.26 E-value=8.2e-11 Score=119.17 Aligned_cols=169 Identities=21% Similarity=0.207 Sum_probs=104.1
Q ss_pred CCCEEEEECCCCCchhhHHHhHh-hh-cCCcEEEEeccCC------CCC---C----------------ChhHHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHK-PL-GKAFEVRCLHIPV------YDR---T----------------PFEGLVKFVEE 230 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~-~L-~~gy~Vi~~Dl~G------~G~---S----------------s~~~~a~dv~~ 230 (756)
..++|||+||+|++...|..... .+ .....++++.-|- .|. + .+++-++.+.+
T Consensus 13 ~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~ 92 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDE 92 (216)
T ss_dssp -SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHH
Confidence 57899999999999988776655 22 3456666654321 122 1 13334455666
Q ss_pred HHHHhhcc-CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhh
Q 004396 231 TVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYV 309 (756)
Q Consensus 231 ~i~~l~~~-~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (756)
+|+.+... .+.++++|.|.|.||++|+.++.++|+.+.++|.+++.......
T Consensus 93 li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~--------------------------- 145 (216)
T PF02230_consen 93 LIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE--------------------------- 145 (216)
T ss_dssp HHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC---------------------------
T ss_pred HHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc---------------------------
Confidence 66654322 34568999999999999999999999999999999874311000
Q ss_pred cCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCC
Q 004396 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGK 389 (756)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~ 389 (756)
.... ..... +.|++++||.+
T Consensus 146 ------------------------~~~~----------------------------------~~~~~--~~pi~~~hG~~ 165 (216)
T PF02230_consen 146 ------------------------LEDR----------------------------------PEALA--KTPILIIHGDE 165 (216)
T ss_dssp ------------------------CHCC----------------------------------HCCCC--TS-EEEEEETT
T ss_pred ------------------------cccc----------------------------------ccccC--CCcEEEEecCC
Confidence 0000 01111 67999999999
Q ss_pred CCCCCCHHHHHHHHHhC----CCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 390 DNMLPSEDEAKRLNNSL----QNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 390 D~~vp~~~~~~~l~~~l----~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
|.++|.+. ++...+.+ .+++++.++++||.+..+.-..+.+.|+
T Consensus 166 D~vvp~~~-~~~~~~~L~~~~~~v~~~~~~g~gH~i~~~~~~~~~~~l~ 213 (216)
T PF02230_consen 166 DPVVPFEW-AEKTAEFLKAAGANVEFHEYPGGGHEISPEELRDLREFLE 213 (216)
T ss_dssp -SSSTHHH-HHHHHHHHHCTT-GEEEEEETT-SSS--HHHHHHHHHHHH
T ss_pred CCcccHHH-HHHHHHHHHhcCCCEEEEEcCCCCCCCCHHHHHHHHHHHh
Confidence 99999884 77666655 3679999999999998766666665554
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.4e-11 Score=120.21 Aligned_cols=168 Identities=18% Similarity=0.163 Sum_probs=104.6
Q ss_pred HHHhHhhh-cCCcEEEEeccCCCCCC----------C-hhHHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHH
Q 004396 195 LILHHKPL-GKAFEVRCLHIPVYDRT----------P-FEGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVA 260 (756)
Q Consensus 195 ~~~~~~~L-~~gy~Vi~~Dl~G~G~S----------s-~~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A 260 (756)
|....+.| ++||.|+.+|+||.+.. . -...++|+.+.++.+.... ..+++.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 33455667 78999999999998854 1 2334677777777765442 236899999999999999999
Q ss_pred HhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhh
Q 004396 261 ARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPA 340 (756)
Q Consensus 261 ~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (756)
.++|+.++++|..+|............ . ... ... .. ...+ . . ....+...
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~------~---~~~--~~~-~~-~~~~-----------~---~-~~~~~~~~-- 132 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTD------I---YTK--AEY-LE-YGDP-----------W---D-NPEFYREL-- 132 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTC------C---HHH--GHH-HH-HSST-----------T---T-SHHHHHHH--
T ss_pred cccceeeeeeeccceecchhccccccc------c---ccc--ccc-cc-cCcc-----------c---h-hhhhhhhh--
Confidence 999999999999988653311110000 0 000 000 00 0000 0 0 00000000
Q ss_pred hhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccC--CCCcEEEEEeCCCCCCCCHHHHHHHHHhCC----CeEEEEE
Q 004396 341 LLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA--VKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNF 414 (756)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~----~~~l~~i 414 (756)
.....+.+ +++|+|++||++|..+|.+. +.++.+.+. +++++++
T Consensus 133 -----------------------------s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~-s~~~~~~L~~~g~~~~~~~~ 182 (213)
T PF00326_consen 133 -----------------------------SPISPADNVQIKPPVLIIHGENDPRVPPSQ-SLRLYNALRKAGKPVELLIF 182 (213)
T ss_dssp -----------------------------HHGGGGGGCGGGSEEEEEEETTBSSSTTHH-HHHHHHHHHHTTSSEEEEEE
T ss_pred -----------------------------ccccccccccCCCCEEEEccCCCCccCHHH-HHHHHHHHHhcCCCEEEEEc
Confidence 00133444 78999999999999999995 888877663 5899999
Q ss_pred cCCCCccc
Q 004396 415 KDNGHTLL 422 (756)
Q Consensus 415 ~~aGH~~~ 422 (756)
|++||...
T Consensus 183 p~~gH~~~ 190 (213)
T PF00326_consen 183 PGEGHGFG 190 (213)
T ss_dssp TT-SSSTT
T ss_pred CcCCCCCC
Confidence 99999554
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.2e-10 Score=117.71 Aligned_cols=100 Identities=14% Similarity=0.151 Sum_probs=74.5
Q ss_pred CCCEEEEECCCCCchhhHHH---hHhhh-cCCcEEEEeccCCCCCCC-------------hhHHHHHHHHHHHHhhccCC
Q 004396 178 GSPTLLFLPGIDGLGLGLIL---HHKPL-GKAFEVRCLHIPVYDRTP-------------FEGLVKFVEETVRREHASSP 240 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~---~~~~L-~~gy~Vi~~Dl~G~G~Ss-------------~~~~a~dv~~~i~~l~~~~~ 240 (756)
..|+||++||.+++...+.. +.+.+ ..+|.|+++|++|++.+. ......++.++++.+...+.
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 47999999999988877652 33333 368999999999987431 01234455566665554332
Q ss_pred --CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 241 --EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 241 --~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
.++++|+|||+||.+++.++.++|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 3589999999999999999999999999998887644
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.8e-11 Score=139.27 Aligned_cols=220 Identities=16% Similarity=0.136 Sum_probs=127.9
Q ss_pred ccccCCCCCceeeeeccCCC-CCCCCCEEEEECCCCCchhh--HHHhHhhh-cCCcEEEEeccCCCCCC----------C
Q 004396 155 EIIKPDGGPPRWFCPVDCGR-PLKGSPTLLFLPGIDGLGLG--LILHHKPL-GKAFEVRCLHIPVYDRT----------P 220 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~-~~~~~p~lV~lHG~~~s~~~--~~~~~~~L-~~gy~Vi~~Dl~G~G~S----------s 220 (756)
.+...||.....+-+.+.+. +.++-|+||++||.+..... |....+.| .+||.|+.+++||.+.- .
T Consensus 369 ~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~ 448 (620)
T COG1506 369 TYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGD 448 (620)
T ss_pred EEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhc
Confidence 44556775433333333332 22235999999999755544 55666777 78999999999977542 0
Q ss_pred -hhHHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhH
Q 004396 221 -FEGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDE 297 (756)
Q Consensus 221 -~~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~ 297 (756)
-....+|+.+.++.+.... ..+++.+.|||+||.+++.++.+.| .+++.+...+....... ........
T Consensus 449 ~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~-------~~~~~~~~ 520 (620)
T COG1506 449 WGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLY-------FGESTEGL 520 (620)
T ss_pred cCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhh-------ccccchhh
Confidence 1123344444444322111 2358999999999999999999887 55555554442211000 00000000
Q ss_pred HHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccC
Q 004396 298 LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA 377 (756)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 377 (756)
.. ........+ . . ....+ ....+ .....+
T Consensus 521 ~~-----~~~~~~~~~-------------~-~-~~~~~----------------------------~~~sp---~~~~~~ 549 (620)
T COG1506 521 RF-----DPEENGGGP-------------P-E-DREKY----------------------------EDRSP---IFYADN 549 (620)
T ss_pred cC-----CHHHhCCCc-------------c-c-ChHHH----------------------------HhcCh---hhhhcc
Confidence 00 000000000 0 0 00000 00000 144578
Q ss_pred CCCcEEEEEeCCCCCCCCHHHHHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhhhc
Q 004396 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (756)
Q Consensus 378 i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (756)
+++|+|+|||++|..++.++ +.++.+.+. +++++++|+.||.+.- |+...+.+++.
T Consensus 550 i~~P~LliHG~~D~~v~~~q-~~~~~~aL~~~g~~~~~~~~p~e~H~~~~--~~~~~~~~~~~ 609 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQ-AEQLVDALKRKGKPVELVVFPDEGHGFSR--PENRVKVLKEI 609 (620)
T ss_pred cCCCEEEEeecCCccCChHH-HHHHHHHHHHcCceEEEEEeCCCCcCCCC--chhHHHHHHHH
Confidence 99999999999999999995 888887774 6799999999999875 55555555544
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.22 E-value=4e-10 Score=125.45 Aligned_cols=252 Identities=13% Similarity=0.034 Sum_probs=146.1
Q ss_pred ceeeeeccCCCCCCCCCEEEEECCCCCchhhH-----HHhHhhh-cCCcEEEEeccCCCCCC----ChhHHHHHHHHHHH
Q 004396 164 PRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGL-----ILHHKPL-GKAFEVRCLHIPVYDRT----PFEGLVKFVEETVR 233 (756)
Q Consensus 164 ~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~-----~~~~~~L-~~gy~Vi~~Dl~G~G~S----s~~~~a~dv~~~i~ 233 (756)
...++|.+... ...+.+||++|.+-.-...+ ..+++.| .+||+|+++|+++-+.. +++|+++.+.+.++
T Consensus 201 ~eLiqY~P~te-~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald 279 (560)
T TIGR01839 201 LELIQYKPITE-QQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLSTYVDALKEAVD 279 (560)
T ss_pred eEEEEeCCCCC-CcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHH
Confidence 45667755432 23467899999987555555 3477777 89999999999887765 68999999999999
Q ss_pred HhhccCCCCCEEEEEeChhhHHHHH----HHHhCCC-cceEEEEeCCCCcCCcCC-cCCch--hHHhhchhH-------H
Q 004396 234 REHASSPEKPIYLVGDSFGGCLALA----VAARNPT-IDLILILSNPATSFGRSQ-LQPLF--PILKAMPDE-------L 298 (756)
Q Consensus 234 ~l~~~~~~~~v~LvGhS~GG~vAl~----~A~~~P~-~v~~lVLi~p~~~~~~~~-~~~~~--~~~~~~~~~-------~ 298 (756)
.+....+.+++.++||||||.+++. +|+++++ +|+.++++.+...+.... ...+. ..+...... -
T Consensus 280 ~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lp 359 (560)
T TIGR01839 280 AVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLD 359 (560)
T ss_pred HHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcC
Confidence 9887777889999999999999997 7888886 799999988777654322 11110 000000000 0
Q ss_pred HHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHH-------
Q 004396 299 HCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA------- 371 (756)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 371 (756)
...+...|..+-.+.+................. .++..+... ...++.....+.+.++.. +...
T Consensus 360 g~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~----fdll~Wn~D----~t~lPg~~~~e~l~ly~~-N~L~~pG~l~v 430 (560)
T TIGR01839 360 GSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPA----FDILYWNND----TTRLPAAFHGDLLDMFKS-NPLTRPDALEV 430 (560)
T ss_pred HHHHHHHHHhcCchhhhHHHHHHHhhcCCCcch----hhHHHHhCc----CccchHHHHHHHHHHHhc-CCCCCCCCEEE
Confidence 011111111111111100000000000000000 001111111 111333344443332221 1100
Q ss_pred ---hhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccch
Q 004396 372 ---NSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEG 426 (756)
Q Consensus 372 ---~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p 426 (756)
.-.|.+|+||++++.|++|.++|.+. +..+.+.+..-...++-.+||..=.=+|
T Consensus 431 ~G~~idL~~I~~Pvl~va~~~DHIvPw~s-~~~~~~l~gs~~~fvl~~gGHIggivnp 487 (560)
T TIGR01839 431 CGTPIDLKKVKCDSFSVAGTNDHITPWDA-VYRSALLLGGKRRFVLSNSGHIQSILNP 487 (560)
T ss_pred CCEEechhcCCCCeEEEecCcCCcCCHHH-HHHHHHHcCCCeEEEecCCCccccccCC
Confidence 13567899999999999999999995 9999998874333444457998544433
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.22 E-value=8.7e-11 Score=128.57 Aligned_cols=100 Identities=16% Similarity=0.061 Sum_probs=79.8
Q ss_pred CCCEEEEECCCCCch--hhHHH-hHhhhc---CCcEEEEeccCCCCCCC-------hhHHHHHHHHHHHHhhc--cCCCC
Q 004396 178 GSPTLLFLPGIDGLG--LGLIL-HHKPLG---KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHA--SSPEK 242 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~--~~~~~-~~~~L~---~gy~Vi~~Dl~G~G~Ss-------~~~~a~dv~~~i~~l~~--~~~~~ 242 (756)
++|++|++||++++. ..|.. +.+.|. ..|+|+++|++|+|.+. ...+++++.++++.+.. ..+-+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 578999999998764 45765 555552 36999999999999873 34566777888887642 22346
Q ss_pred CEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 243 ~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
+++||||||||.+|..++.+.|+++.++++++|+.
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 89999999999999999999999999999999965
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.4e-09 Score=111.01 Aligned_cols=95 Identities=26% Similarity=0.315 Sum_probs=79.5
Q ss_pred CEEEEECCCCCchhhHHHhHhhhcCC-cEEEEeccCCCCCC-----ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhh
Q 004396 180 PTLLFLPGIDGLGLGLILHHKPLGKA-FEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (756)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L~~g-y~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG 253 (756)
++|+|+|+.+++...|..+++.|... +.|++++.+|.+.. +++++++...+.|.... +..+++|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~---~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQ---PEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHT---SSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhC---CCCCeeehccCccH
Confidence 37999999999999999999999886 99999999999733 78888888777776643 33489999999999
Q ss_pred HHHHHHHHhC---CCcceEEEEeCCCC
Q 004396 254 CLALAVAARN---PTIDLILILSNPAT 277 (756)
Q Consensus 254 ~vAl~~A~~~---P~~v~~lVLi~p~~ 277 (756)
.+|.++|.+. ...+..++++++..
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCC
Confidence 9999999663 45688999999644
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-10 Score=111.50 Aligned_cols=161 Identities=19% Similarity=0.177 Sum_probs=102.7
Q ss_pred EEEECCCCCchh-hHHHhH-hhhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHH
Q 004396 182 LLFLPGIDGLGL-GLILHH-KPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAV 259 (756)
Q Consensus 182 lV~lHG~~~s~~-~~~~~~-~~L~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~ 259 (756)
|+++||++++.. .|.... +.|...++|...|+ ..-+.+++.+.+.+.+... .++++|||||+|+..++.+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~---~~P~~~~W~~~l~~~i~~~-----~~~~ilVaHSLGc~~~l~~ 72 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW---DNPDLDEWVQALDQAIDAI-----DEPTILVAHSLGCLTALRW 72 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC-----TS--HHHHHHHHHHCCHC------TTTEEEEEETHHHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc---CCCCHHHHHHHHHHHHhhc-----CCCeEEEEeCHHHHHHHHH
Confidence 688999988864 576644 55655577777766 3336777777777666642 3369999999999999999
Q ss_pred H-HhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhh
Q 004396 260 A-ARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNL 338 (756)
Q Consensus 260 A-~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (756)
+ .....+|.|++|++|........ ..+ . ...+..
T Consensus 73 l~~~~~~~v~g~lLVAp~~~~~~~~---------~~~--------~--------------------------~~~f~~-- 107 (171)
T PF06821_consen 73 LAEQSQKKVAGALLVAPFDPDDPEP---------FPP--------E--------------------------LDGFTP-- 107 (171)
T ss_dssp HHHTCCSSEEEEEEES--SCGCHHC---------CTC--------G--------------------------GCCCTT--
T ss_pred HhhcccccccEEEEEcCCCcccccc---------hhh--------h--------------------------cccccc--
Confidence 9 67778999999999854210000 000 0 000000
Q ss_pred hhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCC
Q 004396 339 PALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNG 418 (756)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aG 418 (756)
.....+.+|.++|.+++|+++|.+. ++++++.+ +++++.++++|
T Consensus 108 ----------------------------------~p~~~l~~~~~viaS~nDp~vp~~~-a~~~A~~l-~a~~~~~~~~G 151 (171)
T PF06821_consen 108 ----------------------------------LPRDPLPFPSIVIASDNDPYVPFER-AQRLAQRL-GAELIILGGGG 151 (171)
T ss_dssp ----------------------------------SHCCHHHCCEEEEEETTBSSS-HHH-HHHHHHHH-T-EEEEETS-T
T ss_pred ----------------------------------CcccccCCCeEEEEcCCCCccCHHH-HHHHHHHc-CCCeEECCCCC
Confidence 0111224567999999999999995 99999998 89999999999
Q ss_pred CcccccchhhHHH
Q 004396 419 HTLLLEEGISLLT 431 (756)
Q Consensus 419 H~~~~e~p~~~~~ 431 (756)
|+.-.+.-..+-+
T Consensus 152 Hf~~~~G~~~~p~ 164 (171)
T PF06821_consen 152 HFNAASGFGPWPE 164 (171)
T ss_dssp TSSGGGTHSS-HH
T ss_pred CcccccCCCchHH
Confidence 9987765544443
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.18 E-value=6e-10 Score=113.04 Aligned_cols=158 Identities=22% Similarity=0.223 Sum_probs=108.1
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCC---CC---------------hhHHHHHHHHHHHHhhccC
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDR---TP---------------FEGLVKFVEETVRREHASS 239 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~---Ss---------------~~~~a~dv~~~i~~l~~~~ 239 (756)
.|.||++|++.|-....+.+++.| +.||.|+++|+-+-.. ++ .+...+++.+.++.+....
T Consensus 14 ~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~ 93 (218)
T PF01738_consen 14 RPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQP 93 (218)
T ss_dssp EEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTT
T ss_pred CCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcc
Confidence 789999999988888888888999 6799999999744433 21 2345677777788776654
Q ss_pred --CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHH
Q 004396 240 --PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMA 317 (756)
Q Consensus 240 --~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (756)
...+|.++|+||||.+++.+|.+. +.+++.|..-|.... .
T Consensus 94 ~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~---------------~---------------------- 135 (218)
T PF01738_consen 94 EVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP---------------P---------------------- 135 (218)
T ss_dssp TCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG---------------G----------------------
T ss_pred ccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC---------------C----------------------
Confidence 346899999999999999999887 678888886651000 0
Q ss_pred HHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHH
Q 004396 318 MVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSED 397 (756)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~ 397 (756)
.. .....++++|+++++|++|+.++.+.
T Consensus 136 --------------~~--------------------------------------~~~~~~~~~P~l~~~g~~D~~~~~~~ 163 (218)
T PF01738_consen 136 --------------PP--------------------------------------LEDAPKIKAPVLILFGENDPFFPPEE 163 (218)
T ss_dssp --------------GH--------------------------------------HHHGGG--S-EEEEEETT-TTS-HHH
T ss_pred --------------cc--------------------------------------hhhhcccCCCEeecCccCCCCCChHH
Confidence 00 02346678999999999999999984
Q ss_pred HHHHHHHhC----CCeEEEEEcCCCCcccccchh
Q 004396 398 EAKRLNNSL----QNCIVRNFKDNGHTLLLEEGI 427 (756)
Q Consensus 398 ~~~~l~~~l----~~~~l~~i~~aGH~~~~e~p~ 427 (756)
.+.+.+.+ ..+++++++|++|........
T Consensus 164 -~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 164 -VEALEEALKAAGVDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp -HHHHHHHHHCTTTTEEEEEETT--TTTTSTTST
T ss_pred -HHHHHHHHHhcCCcEEEEECCCCcccccCCCCc
Confidence 66666665 578999999999976654433
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.5e-10 Score=121.23 Aligned_cols=101 Identities=15% Similarity=0.069 Sum_probs=79.7
Q ss_pred CCCEEEEECCCCCch-hhHHHh-Hhhh-c-CCcEEEEeccCCCCCCC-------hhHHHHHHHHHHHHhhcc--CCCCCE
Q 004396 178 GSPTLLFLPGIDGLG-LGLILH-HKPL-G-KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEKPI 244 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~~-~~~L-~-~gy~Vi~~Dl~G~G~Ss-------~~~~a~dv~~~i~~l~~~--~~~~~v 244 (756)
++|++|++||++++. ..|... ...+ . .+|+|+++|+++++.+. .+.+++++..+++.+... .+.+++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i 114 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENV 114 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHE
Confidence 578999999999887 566554 4444 3 57999999999986542 444566777777776443 234589
Q ss_pred EEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 245 ~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
+||||||||.+|..++.++|+++.++++++|+..
T Consensus 115 ~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 115 HLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred EEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 9999999999999999999999999999999763
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.4e-09 Score=112.10 Aligned_cols=99 Identities=18% Similarity=0.145 Sum_probs=71.9
Q ss_pred CCEEEEECCCCCchh---hHHHhHhhhc-CCcEEEEec----cCCCCCCChhHHHHHHHHHHHHhhccC----CCCCEEE
Q 004396 179 SPTLLFLPGIDGLGL---GLILHHKPLG-KAFEVRCLH----IPVYDRTPFEGLVKFVEETVRREHASS----PEKPIYL 246 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~---~~~~~~~~L~-~gy~Vi~~D----l~G~G~Ss~~~~a~dv~~~i~~l~~~~----~~~~v~L 246 (756)
...|||+.|++.... ....+++.|. .+|.|+-+- +.|+|-++++.-++||.++++++.... ..++|+|
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVL 112 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVL 112 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS------S-EEE
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEEE
Confidence 558999999976543 4677888884 589998887 579999999999999999999988763 4579999
Q ss_pred EEeChhhHHHHHHHHhCC-----CcceEEEEeCCCC
Q 004396 247 VGDSFGGCLALAVAARNP-----TIDLILILSNPAT 277 (756)
Q Consensus 247 vGhS~GG~vAl~~A~~~P-----~~v~~lVLi~p~~ 277 (756)
+|||.|+.-+++|+.+.. ..|.|+||-+|..
T Consensus 113 mGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVS 148 (303)
T PF08538_consen 113 MGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVS 148 (303)
T ss_dssp EEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE--
T ss_pred EecCCCcHHHHHHHhccCccccccceEEEEEeCCCC
Confidence 999999999999997753 6799999999866
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PLN02588 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.9e-10 Score=120.97 Aligned_cols=113 Identities=15% Similarity=0.138 Sum_probs=81.6
Q ss_pred cccCcEEeccc--CCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCc
Q 004396 482 LEDGKIVKGLA--GVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGA 559 (756)
Q Consensus 482 ~~~~~~v~g~~--~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~ 559 (756)
..-+++++|-. .-+.++|+|+|+||+++ +|.+++...+. .+.++.+ .|.. +.++++++.+|+
T Consensus 309 ~Gvrl~v~g~~p~~~~~~~gvI~V~NH~S~-LDPi~L~~Al~---rr~I~~m----tFsi--------p~lg~lL~~i~t 372 (525)
T PLN02588 309 SGIHLTLTVNDLISSDRKKGCLFVCNHRTL-LDPLYISYALR---KKNIKAV----TYSL--------SRLSELLAPIKT 372 (525)
T ss_pred cCcEEEEEeCCCCCCCCCCCEEEEECCcch-hhHHHHHHHcc---cCcceEE----EEEh--------HHHHHHHHhcCc
Confidence 33455666433 22345899999999987 69888887752 1224444 3543 468899999999
Q ss_pred cccCHHh------HHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeee
Q 004396 560 VPVAARN------LFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 560 v~v~~~~------~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
++++|++ +.++|++|+ ++|||||||.. + ..+. ++++||+.+| ++||||++.
T Consensus 373 i~VdRdr~~D~~aI~~LLk~Gd-lVIFPEGTRsr----~--g~Ll-rFk~l~A~la----~~IVPVAI~ 429 (525)
T PLN02588 373 VRLTRDRVKDGQAMEKLLSQGD-LVVCPEGTTCR----E--PYLL-RFSPLFSEVC----DVIVPVAID 429 (525)
T ss_pred eeecCCCcchHHHHHHHHhCCC-EEEccCccccC----C--Cccc-ChhhhHHHhc----CceeeEEEE
Confidence 9999864 567788887 77999999842 2 2233 8899998887 789999995
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.12 E-value=3e-09 Score=113.31 Aligned_cols=205 Identities=16% Similarity=0.080 Sum_probs=115.5
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCC-C--------------------C------hhHHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDR-T--------------------P------FEGLVKFVEE 230 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~-S--------------------s------~~~~a~dv~~ 230 (756)
.-|.||.+||.++....+...+..-..||.|+.+|.||+|. + + +..+..|...
T Consensus 82 ~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~r 161 (320)
T PF05448_consen 82 KLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVR 161 (320)
T ss_dssp SEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHH
T ss_pred CcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHH
Confidence 47899999999999877776665557899999999999993 2 1 2234566666
Q ss_pred HHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhch-hHHHHhHHhHhh
Q 004396 231 TVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP-DELHCAVPYLLS 307 (756)
Q Consensus 231 ~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 307 (756)
.++.+.... ..++|.+.|.|+||.+++.+|+..| +|+++++..|...- ....+.... ...+..+..++.
T Consensus 162 avd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d-------~~~~~~~~~~~~~y~~~~~~~~ 233 (320)
T PF05448_consen 162 AVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD-------FRRALELRADEGPYPEIRRYFR 233 (320)
T ss_dssp HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS-------HHHHHHHT--STTTHHHHHHHH
T ss_pred HHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc-------hhhhhhcCCccccHHHHHHHHh
Confidence 666665432 2468999999999999999999885 69999988875421 111111000 000000111110
Q ss_pred hhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEe
Q 004396 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLAS 387 (756)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G 387 (756)
..-... +..++..+.+.. .+.......|+||+++-.|
T Consensus 234 ~~d~~~---------------~~~~~v~~~L~Y----------------------------~D~~nfA~ri~~pvl~~~g 270 (320)
T PF05448_consen 234 WRDPHH---------------EREPEVFETLSY----------------------------FDAVNFARRIKCPVLFSVG 270 (320)
T ss_dssp HHSCTH---------------CHHHHHHHHHHT----------------------------T-HHHHGGG--SEEEEEEE
T ss_pred ccCCCc---------------ccHHHHHHHHhh----------------------------hhHHHHHHHcCCCEEEEEe
Confidence 000000 001111111110 0112445789999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCC-CeEEEEEcCCCCcccccc-hhhHHHHhh
Q 004396 388 GKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLEE-GISLLTIIK 434 (756)
Q Consensus 388 ~~D~~vp~~~~~~~l~~~l~-~~~l~~i~~aGH~~~~e~-p~~~~~~I~ 434 (756)
-.|+++|+.. .-...+.++ ..++.+++..||....+. .++..+.++
T Consensus 271 l~D~~cPP~t-~fA~yN~i~~~K~l~vyp~~~He~~~~~~~~~~~~~l~ 318 (320)
T PF05448_consen 271 LQDPVCPPST-QFAAYNAIPGPKELVVYPEYGHEYGPEFQEDKQLNFLK 318 (320)
T ss_dssp TT-SSS-HHH-HHHHHCC--SSEEEEEETT--SSTTHHHHHHHHHHHHH
T ss_pred cCCCCCCchh-HHHHHhccCCCeeEEeccCcCCCchhhHHHHHHHHHHh
Confidence 9999999995 777888776 679999999999877665 554544444
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.5e-09 Score=105.84 Aligned_cols=164 Identities=21% Similarity=0.210 Sum_probs=113.9
Q ss_pred CCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccC--CCC---------CC--Ch-------hHHHHHHHHHHHHhh
Q 004396 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIP--VYD---------RT--PF-------EGLVKFVEETVRREH 236 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~--G~G---------~S--s~-------~~~a~dv~~~i~~l~ 236 (756)
+..|+||++||+|++...+.+....+...+.++.+.=+ -.| .. +. +.+++.+....++.+
T Consensus 16 p~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~g 95 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYG 95 (207)
T ss_pred CCCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 46789999999999999998866665555555554310 001 11 22 233333334444433
Q ss_pred ccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHH
Q 004396 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM 316 (756)
Q Consensus 237 ~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (756)
.. ..+++++|+|-||.+++.+..++|+.++++|+.++.......
T Consensus 96 i~--~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~---------------------------------- 139 (207)
T COG0400 96 ID--SSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE---------------------------------- 139 (207)
T ss_pred CC--hhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc----------------------------------
Confidence 32 469999999999999999999999999999998884422100
Q ss_pred HHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCH
Q 004396 317 AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSE 396 (756)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~ 396 (756)
..-..-..|+++++|+.|+++|..
T Consensus 140 --------------------------------------------------------~~~~~~~~pill~hG~~Dpvvp~~ 163 (207)
T COG0400 140 --------------------------------------------------------LLPDLAGTPILLSHGTEDPVVPLA 163 (207)
T ss_pred --------------------------------------------------------cccccCCCeEEEeccCcCCccCHH
Confidence 000112469999999999999999
Q ss_pred HHHHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 397 DEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 397 ~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
. +.++.+.+. +++.+.++ .||.+..|.-+...+.+.
T Consensus 164 ~-~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~wl~ 203 (207)
T COG0400 164 L-AEALAEYLTASGADVEVRWHE-GGHEIPPEELEAARSWLA 203 (207)
T ss_pred H-HHHHHHHHHHcCCCEEEEEec-CCCcCCHHHHHHHHHHHH
Confidence 5 888887764 67888888 899998877666665554
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.07 E-value=3e-08 Score=103.30 Aligned_cols=100 Identities=22% Similarity=0.306 Sum_probs=86.0
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh----cCCcEEEEeccCCCCCC-------------ChhHHHHHHHHHHHHhhccC--
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL----GKAFEVRCLHIPVYDRT-------------PFEGLVKFVEETVRREHASS-- 239 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L----~~gy~Vi~~Dl~G~G~S-------------s~~~~a~dv~~~i~~l~~~~-- 239 (756)
++.++|++|.+|-...|..+++.| ...+.|+++.+.||..+ +++++++...++++......
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 468999999999999999988777 25799999999999643 47788888888888876644
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCC---CcceEEEEeCCCCc
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPATS 278 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P---~~v~~lVLi~p~~~ 278 (756)
+..+++|+|||.|++++++++.+.+ ..|.+++++-|...
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 5679999999999999999999999 78999999999763
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.9e-09 Score=114.37 Aligned_cols=206 Identities=17% Similarity=0.165 Sum_probs=113.0
Q ss_pred CCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhH-hhh-cCCcEEEEeccCCCCCCC-------hhHHHHHHHH
Q 004396 160 DGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH-KPL-GKAFEVRCLHIPVYDRTP-------FEGLVKFVEE 230 (756)
Q Consensus 160 dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~-~~L-~~gy~Vi~~Dl~G~G~Ss-------~~~~a~dv~~ 230 (756)
++..+.+++.-. +. +..|+||++.|+.+....+..++ +.| ..|+.++++|.||.|.|. .+.+.+.|.+
T Consensus 174 g~~I~g~LhlP~-~~--~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd 250 (411)
T PF06500_consen 174 GKTIPGYLHLPS-GE--KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLD 250 (411)
T ss_dssp TCEEEEEEEESS-SS--S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHH
T ss_pred CcEEEEEEEcCC-CC--CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHH
Confidence 333445555433 32 34789999999999887765554 566 699999999999999872 3344555555
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhc
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (756)
.+..... ....+|.++|.|+||.+|+.+|..++++++++|..+++....-.. .......|......+...++...
T Consensus 251 ~L~~~p~-VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~----~~~~~~~P~my~d~LA~rlG~~~ 325 (411)
T PF06500_consen 251 YLASRPW-VDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTD----PEWQQRVPDMYLDVLASRLGMAA 325 (411)
T ss_dssp HHHHSTT-EEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-----HHHHTTS-HHHHHHHHHHCT-SC
T ss_pred HHhcCCc-cChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhcc----HHHHhcCCHHHHHHHHHHhCCcc
Confidence 5555321 124589999999999999999999999999999998865221100 01122233222222211111100
Q ss_pred CChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhc--cCCCCcEEEEEeC
Q 004396 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL--HAVKAEVLVLASG 388 (756)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~PvLvI~G~ 388 (756)
.+ .+.+...+..++-. ....| .+.++|+|.+.++
T Consensus 326 ~~------------------~~~l~~el~~~SLk--------------------------~qGlL~~rr~~~plL~i~~~ 361 (411)
T PF06500_consen 326 VS------------------DESLRGELNKFSLK--------------------------TQGLLSGRRCPTPLLAINGE 361 (411)
T ss_dssp E-------------------HHHHHHHGGGGSTT--------------------------TTTTTTSS-BSS-EEEEEET
T ss_pred CC------------------HHHHHHHHHhcCcc--------------------------hhccccCCCCCcceEEeecC
Confidence 00 11111111110000 00233 6678999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCeEEEEEcCCC
Q 004396 389 KDNMLPSEDEAKRLNNSLQNCIVRNFKDNG 418 (756)
Q Consensus 389 ~D~~vp~~~~~~~l~~~l~~~~l~~i~~aG 418 (756)
+|++.|.++ .+.+...-.+.+...++...
T Consensus 362 ~D~v~P~eD-~~lia~~s~~gk~~~~~~~~ 390 (411)
T PF06500_consen 362 DDPVSPIED-SRLIAESSTDGKALRIPSKP 390 (411)
T ss_dssp T-SSS-HHH-HHHHHHTBTT-EEEEE-SSS
T ss_pred CCCCCCHHH-HHHHHhcCCCCceeecCCCc
Confidence 999999994 88888877778888888644
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.8e-09 Score=114.45 Aligned_cols=101 Identities=20% Similarity=0.065 Sum_probs=75.4
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhhc--CCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhc---cC--CCCCEEEE
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHA---SS--PEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~---~~--~~~~v~Lv 247 (756)
+.|+||++||.+ ++...|..+...|+ .++.|+++|+|.....++....+|+.+.++.+.. .. ...+++|+
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 159 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFA 159 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEE
Confidence 368999999976 56667777888884 4899999999988877655555555555444321 11 23589999
Q ss_pred EeChhhHHHHHHHHhC------CCcceEEEEeCCCCc
Q 004396 248 GDSFGGCLALAVAARN------PTIDLILILSNPATS 278 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~------P~~v~~lVLi~p~~~ 278 (756)
|+|+||.+|+.++... +..+.++|++.|...
T Consensus 160 G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 160 GDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred EECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 9999999999998653 357889999988664
|
|
| >cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.2e-10 Score=110.57 Aligned_cols=117 Identities=12% Similarity=-0.028 Sum_probs=87.6
Q ss_pred cCcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcC--ceeccccccccccccccccCCCccHHHHHHHcCccc
Q 004396 484 DGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKN--IMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVP 561 (756)
Q Consensus 484 ~~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~--~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~ 561 (756)
..++++|.++++.++++|+++||+++ +|.+++.....+ .+ ..++++++..++.. |++++.+...|.++
T Consensus 10 ~~i~v~G~~~~~~~~~~iiv~NH~s~-~D~~~~~~~~~~-~~~~~~~~~v~K~~l~~~--------p~~g~~~~~~~~i~ 79 (193)
T cd07990 10 VKVVVYGDEPKLPKERALIISNHRSE-VDWLVLWMLADR-FGRLGRLKIVLKDSLKYP--------PLGGWGWQLGEFIF 79 (193)
T ss_pred eEEEEEecCccCCCccEEEEEcCCcc-cCHHHHHHHHHH-cCccceEEeeehhhhhcC--------ChhhHHHhhCeeEE
Confidence 35678999999778899999999987 699877666433 33 47889999999865 67888999999999
Q ss_pred cCHHh---------HHHHhcC---CCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeee
Q 004396 562 VAARN---------LFKLLST---KSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGA 621 (756)
Q Consensus 562 v~~~~---------~~~~l~~---g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~ 621 (756)
++|+. ..+.+++ |..++|||||||..... ...+.++|.+.|+|+++-.+
T Consensus 80 v~R~~~~d~~~i~~~~~~l~~~~~~~~lviFPEGTr~~~~~-----------~~~~~~~a~k~~~p~l~~vL 140 (193)
T cd07990 80 LKRKWEKDEKTIKRQLKRLKDSPEPFWLLIFPEGTRFTEEK-----------KERSQEFAEKNGLPPLKHVL 140 (193)
T ss_pred EECChHHhHHHHHHHHHHHhcCCCCcEEEEeCcccCCCHHH-----------HHHHHHHHHHcCCCCcceee
Confidence 99852 2233444 89999999999853221 12344788888888886554
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=4e-09 Score=124.02 Aligned_cols=224 Identities=16% Similarity=0.123 Sum_probs=133.6
Q ss_pred cccCCCCCc-eeeeeccCCCCCCCCCEEEEECCCCCchh--hHHHhHhhh-cCCcEEEEeccCCCCCC------------
Q 004396 156 IIKPDGGPP-RWFCPVDCGRPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRT------------ 219 (756)
Q Consensus 156 ~~~~dg~~~-~~~~~~~~G~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~gy~Vi~~Dl~G~G~S------------ 219 (756)
+...||... .|+.+.+........|+||++||..+... .|......| ++||.|...+.||-|.-
T Consensus 421 ~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~ 500 (686)
T PRK10115 421 ITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLK 500 (686)
T ss_pred EECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhc
Confidence 456777663 35665443221234699999999866653 355555555 89999999999997643
Q ss_pred ---ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchh
Q 004396 220 ---PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD 296 (756)
Q Consensus 220 ---s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~ 296 (756)
+++|+++.+..++++ +. ....++.+.|.|.||.++..++.++|++++++|...|.......... ..++.
T Consensus 501 k~~~~~D~~a~~~~Lv~~-g~-~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~------~~~p~ 572 (686)
T PRK10115 501 KKNTFNDYLDACDALLKL-GY-GSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLD------ESIPL 572 (686)
T ss_pred CCCcHHHHHHHHHHHHHc-CC-CChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhccc------CCCCC
Confidence 455555555555544 11 12468999999999999999999999999999998875432110000 00000
Q ss_pred HHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhcc
Q 004396 297 ELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH 376 (756)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 376 (756)
... .+ ...+++.. .+..+.+...++ ...+.
T Consensus 573 ~~~-----~~-~e~G~p~~----------------~~~~~~l~~~SP----------------------------~~~v~ 602 (686)
T PRK10115 573 TTG-----EF-EEWGNPQD----------------PQYYEYMKSYSP----------------------------YDNVT 602 (686)
T ss_pred Chh-----HH-HHhCCCCC----------------HHHHHHHHHcCc----------------------------hhccC
Confidence 000 00 00122200 000000000000 14456
Q ss_pred CCCCc-EEEEEeCCCCCCCCHHHHHHHHHhCC----CeEEEEE---cCCCCcccccchhhHHHHhhhccc
Q 004396 377 AVKAE-VLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNF---KDNGHTLLLEEGISLLTIIKGTCK 438 (756)
Q Consensus 377 ~i~~P-vLvI~G~~D~~vp~~~~~~~l~~~l~----~~~l~~i---~~aGH~~~~e~p~~~~~~I~~~~f 438 (756)
+++.| +|+++|.+|..|++.+ +.++...+. ..+.+++ +++||..--.+-+.+.+.-.+..|
T Consensus 603 ~~~~P~lLi~~g~~D~RV~~~~-~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aF 671 (686)
T PRK10115 603 AQAYPHLLVTTGLHDSQVQYWE-PAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAF 671 (686)
T ss_pred ccCCCceeEEecCCCCCcCchH-HHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 77889 5677999999999995 888877764 4567777 899998443333443333333344
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.7e-09 Score=122.25 Aligned_cols=119 Identities=12% Similarity=-0.031 Sum_probs=89.5
Q ss_pred cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchh---hH-HHhHhhh-cCCcEEEEeccCCCCCCC-----h-hHHHH
Q 004396 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL---GL-ILHHKPL-GKAFEVRCLHIPVYDRTP-----F-EGLVK 226 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~---~~-~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-----~-~~~a~ 226 (756)
..||..+....+.+.+. +..|+||++||++.+.. .+ ......| ++||.|+++|+||+|.|. . .+.++
T Consensus 3 ~~DG~~L~~~~~~P~~~--~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~ 80 (550)
T TIGR00976 3 MRDGTRLAIDVYRPAGG--GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAA 80 (550)
T ss_pred CCCCCEEEEEEEecCCC--CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccch
Confidence 34666654333444332 24789999999987653 12 2233455 789999999999999993 2 56788
Q ss_pred HHHHHHHHhhcc-CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 227 FVEETVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 227 dv~~~i~~l~~~-~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
|+.++++.+..+ ..+.+|.++|||+||.+++.+|..+|+.++++|..++...
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 999999987654 2245899999999999999999999999999999887654
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.4e-09 Score=123.07 Aligned_cols=100 Identities=17% Similarity=0.202 Sum_probs=80.0
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC------------------------------ChhHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT------------------------------PFEGLVK 226 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S------------------------------s~~~~a~ 226 (756)
+.|+|||+||++++...|..+++.|. ++|+|+++|+||||.| .+.+.+.
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 45799999999999999999999994 7899999999999988 2466678
Q ss_pred HHHHHHHHhh------cc------CCCCCEEEEEeChhhHHHHHHHHhCCC-----------cceEEEEeCCCC
Q 004396 227 FVEETVRREH------AS------SPEKPIYLVGDSFGGCLALAVAARNPT-----------IDLILILSNPAT 277 (756)
Q Consensus 227 dv~~~i~~l~------~~------~~~~~v~LvGhS~GG~vAl~~A~~~P~-----------~v~~lVLi~p~~ 277 (756)
|+..+...+. .. .+..+++++||||||.+++.++..... .+....+.+|..
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an~~~~~~~~~~l~~~~~a~l~~pgG 601 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYANTPLGSPTADALYAVNAASLQNPGG 601 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcCccccCCccccccccceeeeecCCc
Confidence 8888888776 11 445799999999999999999975322 234566666554
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=3e-08 Score=102.25 Aligned_cols=139 Identities=19% Similarity=0.222 Sum_probs=103.0
Q ss_pred hHHHHhcCCC--CccHHHHHHhhcccccC-CCCCceeeeeccCCCC-CCCCCEEEEECCCCCchhhHHHhHhhhcC----
Q 004396 133 LEVLWDDGYG--TDSVKDYLDAAKEIIKP-DGGPPRWFCPVDCGRP-LKGSPTLLFLPGIDGLGLGLILHHKPLGK---- 204 (756)
Q Consensus 133 ~~~~~~~~~~--~~~~~~y~~~~~~~~~~-dg~~~~~~~~~~~G~~-~~~~p~lV~lHG~~~s~~~~~~~~~~L~~---- 204 (756)
...+|.+.|. ++..+.++..-+.+.+. .|-...+++......+ .+.--+|+++|||+|+-..|..+++-|.+
T Consensus 102 vv~ywr~~y~~~W~e~e~~ln~f~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~h 181 (469)
T KOG2565|consen 102 VVEYWRDLYLPKWKEREEFLNQFKQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRH 181 (469)
T ss_pred HHHHHHHhhcccHHHHHHHHHhhhhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCcccc
Confidence 5568888887 44445566555555433 5777777776554322 22334799999999999999999988832
Q ss_pred ------CcEEEEeccCCCCCCC--------hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEE
Q 004396 205 ------AFEVRCLHIPVYDRTP--------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLIL 270 (756)
Q Consensus 205 ------gy~Vi~~Dl~G~G~Ss--------~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~l 270 (756)
.|+|+|+.+||+|-|+ ..+.|.-+..++-.++-+ ++++-|-.||+.|+..+|..+|+.|.|+
T Consensus 182 g~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~n----kffiqGgDwGSiI~snlasLyPenV~Gl 257 (469)
T KOG2565|consen 182 GNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGYN----KFFIQGGDWGSIIGSNLASLYPENVLGL 257 (469)
T ss_pred CCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCcc----eeEeecCchHHHHHHHHHhhcchhhhHh
Confidence 3899999999999882 445566666666665544 9999999999999999999999999988
Q ss_pred EEeCC
Q 004396 271 ILSNP 275 (756)
Q Consensus 271 VLi~p 275 (756)
-+-.+
T Consensus 258 Hlnm~ 262 (469)
T KOG2565|consen 258 HLNMC 262 (469)
T ss_pred hhccc
Confidence 77443
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.5e-08 Score=95.78 Aligned_cols=164 Identities=19% Similarity=0.205 Sum_probs=113.1
Q ss_pred CCCCEEEEECCC-----CCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--ChhH---HHHHHHHHHHHhhccCCCCCE-
Q 004396 177 KGSPTLLFLPGI-----DGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--PFEG---LVKFVEETVRREHASSPEKPI- 244 (756)
Q Consensus 177 ~~~p~lV~lHG~-----~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--s~~~---~a~dv~~~i~~l~~~~~~~~v- 244 (756)
+..|..|.+|-. ..+...-..++..| ..||.|+.+|+||-|+| +++. -.+|..+.++.++.+.+..+.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~ 105 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASC 105 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhh
Confidence 357777777754 23334455566777 78999999999999999 2221 245666777777777776665
Q ss_pred EEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcC
Q 004396 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENR 324 (756)
Q Consensus 245 ~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (756)
.|.|+|+|++|++.+|.+.|+.- ..+.+.|....
T Consensus 106 ~l~GfSFGa~Ia~~la~r~~e~~-~~is~~p~~~~--------------------------------------------- 139 (210)
T COG2945 106 WLAGFSFGAYIAMQLAMRRPEIL-VFISILPPINA--------------------------------------------- 139 (210)
T ss_pred hhcccchHHHHHHHHHHhccccc-ceeeccCCCCc---------------------------------------------
Confidence 78999999999999999987642 33333321100
Q ss_pred CChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHH
Q 004396 325 LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (756)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~ 404 (756)
++ ...+....+|.++|+|+.|.++.... ..+..+
T Consensus 140 ----------~d-----------------------------------fs~l~P~P~~~lvi~g~~Ddvv~l~~-~l~~~~ 173 (210)
T COG2945 140 ----------YD-----------------------------------FSFLAPCPSPGLVIQGDADDVVDLVA-VLKWQE 173 (210)
T ss_pred ----------hh-----------------------------------hhhccCCCCCceeEecChhhhhcHHH-HHHhhc
Confidence 00 03345567899999999999998884 666665
Q ss_pred hCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 405 SLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 405 ~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
. ...+++++++++||.+-. -..+.+.|.
T Consensus 174 ~-~~~~~i~i~~a~HFF~gK-l~~l~~~i~ 201 (210)
T COG2945 174 S-IKITVITIPGADHFFHGK-LIELRDTIA 201 (210)
T ss_pred C-CCCceEEecCCCceeccc-HHHHHHHHH
Confidence 5 567899999999998754 344444444
|
|
| >PRK11915 glycerol-3-phosphate acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.9e-09 Score=118.52 Aligned_cols=191 Identities=17% Similarity=0.188 Sum_probs=113.9
Q ss_pred ccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCHH-----
Q 004396 491 LAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAAR----- 565 (756)
Q Consensus 491 ~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~~----- 565 (756)
+.++.++.|+||++||.++ +|.+++...++...-...+.++...++. |.+..+++..|++.+-|.
T Consensus 108 lr~~~~~~pvIfvp~HrS~-lDylllsyvL~~~~l~~~~~~ag~nl~~---------~~lg~~lr~~GafFirRsf~~~~ 177 (621)
T PRK11915 108 LRKLDRKATLAFAFSHRSY-LDGMLLPEVILANRLSPALTFGGANLNF---------FPMGAWAKRTGAIFIRRQTKDIP 177 (621)
T ss_pred HHHhccCCCEEEEeccccc-cHHHHHHHHHHHcCCCCceeehhhhhcc---------hhHHHHHHhCCcEEeccCCCCch
Confidence 4455667899999999988 7998888766543334445555444442 568889999999887663
Q ss_pred --------hHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHH-------HHcCCceeeeeeecccchhhh
Q 004396 566 --------NLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMA-------ARFGATIVPFGAVGEDDIADL 630 (756)
Q Consensus 566 --------~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA-------~~~g~~IVPv~~~G~~~~~~~ 630 (756)
-+..+|++|.++.+||||+|+..+ ++. +-|.|...+. ...+++||||+|. |+.
T Consensus 178 LY~~vl~eYi~~ll~~G~~le~F~EG~RSRtG------kll-~Pk~GlLs~vv~~~~~~~~~dV~iVPVsI~-----YDr 245 (621)
T PRK11915 178 VYRFVLRAYAAQLVQNHVNLTWSIEGGRTRTG------KLR-PPVFGILRYITDAVDEIDGPEVYLVPTSIV-----YDQ 245 (621)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCC------CCC-CCchhhHHHHHHHHhcCCCCCeEEEEEEEe-----ecc
Confidence 245789999999999999996432 233 5455555544 3458999999994 333
Q ss_pred hcCccccccccchHHHHHHhhccccccccccccccccccccc-CccCCCCCceEEEEeCCcccCCCCCC-----cCCCHH
Q 004396 631 VLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFF-PGLLPKVPGRFYYLFGKPIQTKGREV-----SLKDKE 704 (756)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-pg~~p~~p~~~~~~~G~PI~~~~~~~-----~~~~~~ 704 (756)
+++.. .+...+.+....-.. ....+.. ..+.. .-|++++.||+||...++.+ ......
T Consensus 246 V~E~~---------~y~~El~G~~K~~Es------l~~l~~~~~~l~~-~~G~i~V~FgePisL~~~l~~~~~~~~~~~~ 309 (621)
T PRK11915 246 LHEVE---------AMTTEAYGAVKRPED------LRFLVRLARQQGE-RLGRAYLDFGEPLPLRKRLQELRADKSGTGS 309 (621)
T ss_pred cccHH---------HHHHHhcCCCCCccH------HHHHHHHHHHHhh-cCceEEEECCCCccHHHHHhhhccCcccchh
Confidence 33322 122222221100000 0000000 01111 24899999999999886521 111234
Q ss_pred HHHHHHHHHHHHHHH
Q 004396 705 NANELYLHIKSQVER 719 (756)
Q Consensus 705 ~~~~l~~~v~~~v~~ 719 (756)
..+++-.+|...|.+
T Consensus 310 ~v~~La~~V~~~In~ 324 (621)
T PRK11915 310 EIERIALDVEHRINR 324 (621)
T ss_pred HHHHHHHHHHHHHhh
Confidence 456666666665554
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1e-08 Score=111.03 Aligned_cols=125 Identities=14% Similarity=0.098 Sum_probs=97.7
Q ss_pred HhhcccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhH-----h-hh-cCCcEEEEeccCCCCCC----
Q 004396 151 DAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH-----K-PL-GKAFEVRCLHIPVYDRT---- 219 (756)
Q Consensus 151 ~~~~~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~-----~-~L-~~gy~Vi~~Dl~G~G~S---- 219 (756)
.+...+.+.||-.+.+-.+-..+ ..+|+|++.||+.+++..|-... . .| .+||+||.-..||.-.|
T Consensus 48 ~E~h~V~T~DgYiL~lhRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~ 124 (403)
T KOG2624|consen 48 VEEHEVTTEDGYILTLHRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHK 124 (403)
T ss_pred eEEEEEEccCCeEEEEeeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhc
Confidence 34567788898865554443332 35899999999999999997643 1 22 57999999999997655
Q ss_pred -------------ChhHHH-HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCC---cceEEEEeCCCCc
Q 004396 220 -------------PFEGLV-KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT---IDLILILSNPATS 278 (756)
Q Consensus 220 -------------s~~~~a-~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~---~v~~lVLi~p~~~ 278 (756)
|+++++ -|+-+.|+......+..+++.||||.|+.....+++..|+ +|+.+++++|+..
T Consensus 125 ~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 125 KLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred ccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 466765 4788888887766677799999999999999999988875 7999999999883
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.5e-08 Score=98.12 Aligned_cols=100 Identities=21% Similarity=0.153 Sum_probs=72.7
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCC---CChhHHHHHHHHHHHH-hhcc------CCCCCEEEE
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDR---TPFEGLVKFVEETVRR-EHAS------SPEKPIYLV 247 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~---Ss~~~~a~dv~~~i~~-l~~~------~~~~~v~Lv 247 (756)
-|++||+||+......|..+++++ +.||-|+++|+...+. +.--+.+..+.+++.. +... ..-.++.|.
T Consensus 17 yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~ 96 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALA 96 (259)
T ss_pred cCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceEEe
Confidence 899999999998888899999999 7899999999544332 2111222222222221 2111 123589999
Q ss_pred EeChhhHHHHHHHHhC-----CCcceEEEEeCCCCc
Q 004396 248 GDSFGGCLALAVAARN-----PTIDLILILSNPATS 278 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~-----P~~v~~lVLi~p~~~ 278 (756)
|||-||-+|..++..+ +.+++++|+++|..+
T Consensus 97 GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 97 GHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred eeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 9999999999999887 568999999999774
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.7e-08 Score=104.94 Aligned_cols=237 Identities=11% Similarity=0.028 Sum_probs=134.4
Q ss_pred CCEEEEECCCCCchhhH-HHhHhhhcCCcEEEEeccCCCC-------CCChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 179 SPTLLFLPGIDGLGLGL-ILHHKPLGKAFEVRCLHIPVYD-------RTPFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~-~~~~~~L~~gy~Vi~~Dl~G~G-------~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
.|+||++.-+.+....+ +.+++.|-.+++|+..|+.--+ .=+++|+++-+.+++++++ . +++++|+|
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G----~-~v~l~GvC 176 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLG----P-DIHVIAVC 176 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhC----C-CCcEEEEc
Confidence 37899998887655544 4577887449999999986555 2278999998889998752 2 38999999
Q ss_pred hhhHHHHHHHHhC-----CCcceEEEEeCCCCcCCcCCcCCchhHHh-----hchhHHHH------------hHHhHh--
Q 004396 251 FGGCLALAVAARN-----PTIDLILILSNPATSFGRSQLQPLFPILK-----AMPDELHC------------AVPYLL-- 306 (756)
Q Consensus 251 ~GG~vAl~~A~~~-----P~~v~~lVLi~p~~~~~~~~~~~~~~~~~-----~~~~~~~~------------~~~~~~-- 306 (756)
+||..++.+++.. |+.++.++++.++..+...+ .....+.. .+...... .+|..+
T Consensus 177 qgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p-~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~ 255 (406)
T TIGR01849 177 QPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASP-TVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQL 255 (406)
T ss_pred hhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCC-chHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHH
Confidence 9999987776654 66799999998877664431 11111110 00000000 011110
Q ss_pred -hhhcCChhHHHH--H----hhhcCC-ChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHH-------
Q 004396 307 -SYVMGDPIKMAM--V----NIENRL-PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA------- 371 (756)
Q Consensus 307 -~~~~~~~~~~~~--~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 371 (756)
.+..-++..... . ....+. ...+....+++.+.. .-.++.+.+...+..+.......
T Consensus 256 ~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d--------~~dlpge~y~~~v~~vf~~n~L~~G~l~v~ 327 (406)
T TIGR01849 256 AGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLA--------VMDMTAEFYLQTIDVVFQQFLLPQGKFIVE 327 (406)
T ss_pred HHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhh--------ccCCcHHHHHHHHHHHHHhCCccCCcEEEC
Confidence 111112211000 0 000000 000001111111111 01133344443333322221111
Q ss_pred --hhhccCCC-CcEEEEEeCCCCCCCCHHHHHHHHHhC---C--CeEEEEEcCCCCcccccchhhHH
Q 004396 372 --NSRLHAVK-AEVLVLASGKDNMLPSEDEAKRLNNSL---Q--NCIVRNFKDNGHTLLLEEGISLL 430 (756)
Q Consensus 372 --~~~l~~i~-~PvLvI~G~~D~~vp~~~~~~~l~~~l---~--~~~l~~i~~aGH~~~~e~p~~~~ 430 (756)
.-++.+|+ +|+|.|.|++|.++++.. ++.+.+.+ + +.+.+..+++||+..+-....-.
T Consensus 328 G~~Vdl~~I~~~pll~V~ge~D~I~p~~q-t~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~ 393 (406)
T TIGR01849 328 GKRVDPGAITRVALLTVEGENDDISGLGQ-TKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFRE 393 (406)
T ss_pred CEEecHHHCcccceEEEeccCCCcCCHHH-hHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhh
Confidence 14567899 999999999999999995 88888875 4 44677777899998887655443
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1e-07 Score=97.31 Aligned_cols=155 Identities=19% Similarity=0.213 Sum_probs=119.6
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCC-CCC------------------ChhHHHHHHHHHHHHhhcc
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVY-DRT------------------PFEGLVKFVEETVRREHAS 238 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~-G~S------------------s~~~~a~dv~~~i~~l~~~ 238 (756)
.|.||++|++.+-....+...+.| ..||.|+++|+-+. |.+ +..+...|+.+.++.+...
T Consensus 27 ~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~ 106 (236)
T COG0412 27 FPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQ 106 (236)
T ss_pred CCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhC
Confidence 389999999999999999999999 78999999998552 222 1356778888888888754
Q ss_pred C--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHH
Q 004396 239 S--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM 316 (756)
Q Consensus 239 ~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (756)
. ...+|.++|+||||.+++.+|.+.| .+++.|..-+..... .
T Consensus 107 ~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~--------------------------------~--- 150 (236)
T COG0412 107 PQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD--------------------------------D--- 150 (236)
T ss_pred CCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC--------------------------------c---
Confidence 3 2457999999999999999999887 677777655422100 0
Q ss_pred HHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCH
Q 004396 317 AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSE 396 (756)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~ 396 (756)
.....++++|+|+.+|+.|..+|..
T Consensus 151 -------------------------------------------------------~~~~~~~~~pvl~~~~~~D~~~p~~ 175 (236)
T COG0412 151 -------------------------------------------------------TADAPKIKVPVLLHLAGEDPYIPAA 175 (236)
T ss_pred -------------------------------------------------------ccccccccCcEEEEecccCCCCChh
Confidence 0112578899999999999999999
Q ss_pred HHHHHHHHhCC----CeEEEEEcCCCCcccccc
Q 004396 397 DEAKRLNNSLQ----NCIVRNFKDNGHTLLLEE 425 (756)
Q Consensus 397 ~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~ 425 (756)
. .+.+.+.+. +.++.+++++.|..+-+.
T Consensus 176 ~-~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~ 207 (236)
T COG0412 176 D-VDALAAALEDAGVKVDLEIYPGAGHGFANDR 207 (236)
T ss_pred H-HHHHHHHHHhcCCCeeEEEeCCCccccccCC
Confidence 4 777776653 578899999889877554
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.82 E-value=7e-08 Score=93.66 Aligned_cols=238 Identities=14% Similarity=0.109 Sum_probs=128.9
Q ss_pred cccCCCCCceeeeeccCCCCCCCCC-EEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC----------ChhH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSP-TLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT----------PFEG 223 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p-~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S----------s~~~ 223 (756)
+...||....-..+-..|. .+ .++.-.+.+-....|++++... ..||+|+.+|+||.|.| ++.|
T Consensus 10 l~~~DG~~l~~~~~pA~~~----~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~D 85 (281)
T COG4757 10 LPAPDGYSLPGQRFPADGK----ASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLD 85 (281)
T ss_pred cccCCCccCccccccCCCC----CCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhh
Confidence 4456666533333322222 23 3444444455556677788888 67999999999999998 3667
Q ss_pred HH-HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch------hHHhh---
Q 004396 224 LV-KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF------PILKA--- 293 (756)
Q Consensus 224 ~a-~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~------~~~~~--- 293 (756)
++ .|+.+.++.++...+..+.+.||||+||.+.-. +.+++ +..+........... .+.... .+...
T Consensus 86 wA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL-~~~~~-k~~a~~vfG~gagws--g~m~~~~~l~~~~l~~lv~p 161 (281)
T COG4757 86 WARLDFPAALAALKKALPGHPLYFVGHSFGGQALGL-LGQHP-KYAAFAVFGSGAGWS--GWMGLRERLGAVLLWNLVGP 161 (281)
T ss_pred hhhcchHHHHHHHHhhCCCCceEEeeccccceeecc-cccCc-ccceeeEeccccccc--cchhhhhcccceeecccccc
Confidence 76 578888888887667889999999999987654 44454 444444433322211 110000 00000
Q ss_pred chhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhh
Q 004396 294 MPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANS 373 (756)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (756)
....+...+++. +.+-. ..++. ....++.. + .. .+...+ .........+
T Consensus 162 ~lt~w~g~~p~~---l~G~G---------~d~p~-~v~RdW~R----w----cR----~p~y~f------ddp~~~~~~q 210 (281)
T COG4757 162 PLTFWKGYMPKD---LLGLG---------SDLPG-TVMRDWAR----W----CR----HPRYYF------DDPAMRNYRQ 210 (281)
T ss_pred chhhccccCcHh---hcCCC---------ccCcc-hHHHHHHH----H----hc----Cccccc------cChhHhHHHH
Confidence 000111111111 11100 00100 00011100 0 00 000000 0000111235
Q ss_pred hccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE--EcC----CCCcccccch-hhHHHHh
Q 004396 374 RLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRN--FKD----NGHTLLLEEG-ISLLTII 433 (756)
Q Consensus 374 ~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~--i~~----aGH~~~~e~p-~~~~~~I 433 (756)
..+++.+|++.+...+|+.+|+.. .+.+.+..+|+.+.. ++. .||+-..-++ |.+-+.+
T Consensus 211 ~yaaVrtPi~~~~~~DD~w~P~As-~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~ 276 (281)
T COG4757 211 VYAAVRTPITFSRALDDPWAPPAS-RDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEM 276 (281)
T ss_pred HHHHhcCceeeeccCCCCcCCHHH-HHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHH
Confidence 567889999999999999999995 999999888875544 333 4898887776 4444433
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.4e-08 Score=90.23 Aligned_cols=157 Identities=19% Similarity=0.203 Sum_probs=108.4
Q ss_pred CEEEEECCCCCchh-hHHHhHhhhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHH
Q 004396 180 PTLLFLPGIDGLGL-GLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (756)
Q Consensus 180 p~lV~lHG~~~s~~-~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~ 258 (756)
+.+|++||+.+++. .|....+.= --.+-.+++.-.-.-..+||++.+...+... .++++||+||+|+..+++
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~--l~~a~rveq~~w~~P~~~dWi~~l~~~v~a~-----~~~~vlVAHSLGc~~v~h 75 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESA--LPNARRVEQDDWEAPVLDDWIARLEKEVNAA-----EGPVVLVAHSLGCATVAH 75 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhh--CccchhcccCCCCCCCHHHHHHHHHHHHhcc-----CCCeEEEEecccHHHHHH
Confidence 46899999977764 565543321 1225566666666667888888888887763 236999999999999999
Q ss_pred HHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhh
Q 004396 259 VAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNL 338 (756)
Q Consensus 259 ~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (756)
++.+....|.|++|++|+.-...... +..+..+ .
T Consensus 76 ~~~~~~~~V~GalLVAppd~~~~~~~------------------~~~~~tf--~-------------------------- 109 (181)
T COG3545 76 WAEHIQRQVAGALLVAPPDVSRPEIR------------------PKHLMTF--D-------------------------- 109 (181)
T ss_pred HHHhhhhccceEEEecCCCccccccc------------------hhhcccc--C--------------------------
Confidence 99988789999999998552110000 0000000 0
Q ss_pred hhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCC
Q 004396 339 PALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNG 418 (756)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aG 418 (756)
........-|.+++++.+|++++.+. ++.+++.+ ++.++...++|
T Consensus 110 ---------------------------------~~p~~~lpfps~vvaSrnDp~~~~~~-a~~~a~~w-gs~lv~~g~~G 154 (181)
T COG3545 110 ---------------------------------PIPREPLPFPSVVVASRNDPYVSYEH-AEDLANAW-GSALVDVGEGG 154 (181)
T ss_pred ---------------------------------CCccccCCCceeEEEecCCCCCCHHH-HHHHHHhc-cHhheeccccc
Confidence 01123345699999999999999995 99999988 46677777789
Q ss_pred Cccccc
Q 004396 419 HTLLLE 424 (756)
Q Consensus 419 H~~~~e 424 (756)
|+.-.+
T Consensus 155 HiN~~s 160 (181)
T COG3545 155 HINAES 160 (181)
T ss_pred ccchhh
Confidence 975433
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=98.81 E-value=8.3e-08 Score=93.88 Aligned_cols=86 Identities=22% Similarity=0.386 Sum_probs=63.6
Q ss_pred EEEECCCCCchhhHHH--hHhhhc---CCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHH
Q 004396 182 LLFLPGIDGLGLGLIL--HHKPLG---KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (756)
Q Consensus 182 lV~lHG~~~s~~~~~~--~~~~L~---~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vA 256 (756)
|+++||+.++..+... +.+.++ ....+.++|++-+ .++..+.+.++++.... +.+.|||+||||..|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~----p~~a~~~l~~~i~~~~~----~~~~liGSSlGG~~A 73 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF----PEEAIAQLEQLIEELKP----ENVVLIGSSLGGFYA 73 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC----HHHHHHHHHHHHHhCCC----CCeEEEEEChHHHHH
Confidence 7999999999887654 334443 3467888888743 45566777777777433 359999999999999
Q ss_pred HHHHHhCCCcceEEEEeCCCCc
Q 004396 257 LAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 257 l~~A~~~P~~v~~lVLi~p~~~ 278 (756)
..+|.+++-. + ||+||+..
T Consensus 74 ~~La~~~~~~--a-vLiNPav~ 92 (187)
T PF05728_consen 74 TYLAERYGLP--A-VLINPAVR 92 (187)
T ss_pred HHHHHHhCCC--E-EEEcCCCC
Confidence 9999988532 2 99999773
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.8e-08 Score=100.08 Aligned_cols=98 Identities=24% Similarity=0.285 Sum_probs=72.1
Q ss_pred EEEECCCCC---chhhHHHhHhhh-c-CCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhcc-----CCCCCEEEEEeCh
Q 004396 182 LLFLPGIDG---LGLGLILHHKPL-G-KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-----SPEKPIYLVGDSF 251 (756)
Q Consensus 182 lV~lHG~~~---s~~~~~~~~~~L-~-~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~-----~~~~~v~LvGhS~ 251 (756)
||++||.+. +......+...+ . .++.|+.+|+|=....++.+..+|+.+.++.+... ....+|+|+|+|.
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccccccccceEEeeccc
Confidence 789999753 334445556666 3 68999999999888888888988888888877655 4456999999999
Q ss_pred hhHHHHHHHHhCCC----cceEEEEeCCCCcC
Q 004396 252 GGCLALAVAARNPT----IDLILILSNPATSF 279 (756)
Q Consensus 252 GG~vAl~~A~~~P~----~v~~lVLi~p~~~~ 279 (756)
||.+|+.++....+ .++++++++|....
T Consensus 81 Gg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 81 GGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999975332 48999999996543
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.6e-07 Score=120.44 Aligned_cols=96 Identities=23% Similarity=0.318 Sum_probs=84.2
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhh
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG 253 (756)
+++++|+||++++...|..+.+.|...++|+++|.+|+|.+ +++++++++.+.++.+. +..+++++||||||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~---~~~p~~l~G~S~Gg 1144 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQQ---PHGPYHLLGYSLGG 1144 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhhC---CCCCEEEEEechhh
Confidence 57899999999999999999999988999999999999865 68999999988888743 23489999999999
Q ss_pred HHHHHHHHh---CCCcceEEEEeCCCC
Q 004396 254 CLALAVAAR---NPTIDLILILSNPAT 277 (756)
Q Consensus 254 ~vAl~~A~~---~P~~v~~lVLi~p~~ 277 (756)
.+|..+|.+ .++.+..++++++..
T Consensus 1145 ~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1145 TLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred HHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999985 578899999998743
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.2e-07 Score=98.47 Aligned_cols=237 Identities=16% Similarity=0.107 Sum_probs=137.4
Q ss_pred CCCEEEEECCCCCchhhHH-----HhHhhh-cCCcEEEEeccCCCCCC----ChhHHH-HHHHHHHHHhhccCCCCCEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLI-----LHHKPL-GKAFEVRCLHIPVYDRT----PFEGLV-KFVEETVRREHASSPEKPIYL 246 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~-----~~~~~L-~~gy~Vi~~Dl~G~G~S----s~~~~a-~dv~~~i~~l~~~~~~~~v~L 246 (756)
.+++++++|-+-..-..|. .++..| .+|+.|+.+|+++-+.+ +++|++ +.+...++......+.++|.+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inl 185 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINL 185 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccce
Confidence 4667888998866555443 244555 78999999999877666 688888 777777777766666679999
Q ss_pred EEeChhhHHHHHHHHhCCCc-ceEEEEeCCCCcCCcCCcCCch-hH--HhhchhHHH-------HhHHhHhhhhcCChhH
Q 004396 247 VGDSFGGCLALAVAARNPTI-DLILILSNPATSFGRSQLQPLF-PI--LKAMPDELH-------CAVPYLLSYVMGDPIK 315 (756)
Q Consensus 247 vGhS~GG~vAl~~A~~~P~~-v~~lVLi~p~~~~~~~~~~~~~-~~--~~~~~~~~~-------~~~~~~~~~~~~~~~~ 315 (756)
+|||.||.++..+++.++.+ |+.++++.+...+......... .. +..+..... ..+...|..+..+.+.
T Consensus 186 iGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndli 265 (445)
T COG3243 186 IGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLI 265 (445)
T ss_pred eeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccc
Confidence 99999999999999999877 9998887766644332211111 11 111110000 0111112222111111
Q ss_pred HH--HHhhhcCCCh-HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHH---------hhhccCCCCcEE
Q 004396 316 MA--MVNIENRLPP-RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA---------NSRLHAVKAEVL 383 (756)
Q Consensus 316 ~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~i~~PvL 383 (756)
.. ......+..+ ......+. .-....+.....+.++.+....... .-.|.+|+||++
T Consensus 266 w~~fV~nyl~ge~pl~fdllyWn-----------~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy 334 (445)
T COG3243 266 WNYFVNNYLDGEQPLPFDLLYWN-----------ADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVY 334 (445)
T ss_pred hHHHHHHhcCCCCCCchhHHHhh-----------CCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceE
Confidence 10 0000011110 00000000 0011233344444443222211111 145789999999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccch
Q 004396 384 VLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEG 426 (756)
Q Consensus 384 vI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p 426 (756)
.+.|++|.+.|.+. .....+.+++-...++-++||....=+|
T Consensus 335 ~~a~~~DhI~P~~S-v~~g~~l~~g~~~f~l~~sGHIa~vVN~ 376 (445)
T COG3243 335 NLAAEEDHIAPWSS-VYLGARLLGGEVTFVLSRSGHIAGVVNP 376 (445)
T ss_pred EEeecccccCCHHH-HHHHHHhcCCceEEEEecCceEEEEeCC
Confidence 99999999999995 8888888888444444558999876554
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.1e-07 Score=91.19 Aligned_cols=108 Identities=18% Similarity=0.180 Sum_probs=71.5
Q ss_pred eeccCCCCCCCCCEEEEECCCCCchhhHHHh--Hhhh--cCCcEEEEeccCCCC--CC--------------ChhHHHHH
Q 004396 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILH--HKPL--GKAFEVRCLHIPVYD--RT--------------PFEGLVKF 227 (756)
Q Consensus 168 ~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~--~~~L--~~gy~Vi~~Dl~G~G--~S--------------s~~~~a~d 227 (756)
-|.+.+.+....|+||++||.+++...+... ...| ..+|-|+.++..... .. +...+++.
T Consensus 5 lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~l 84 (220)
T PF10503_consen 5 LYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAAL 84 (220)
T ss_pred EecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHH
Confidence 3444444323479999999999999887653 2345 356777777743110 00 12223333
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
+..+..+..++ ..+|++.|+|.||.++..+++.+|+.+.++.+.+...
T Consensus 85 v~~v~~~~~iD--~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 85 VDYVAARYNID--PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HHhHhhhcccC--CCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 33333333333 4599999999999999999999999999988877644
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1e-06 Score=98.99 Aligned_cols=104 Identities=20% Similarity=0.156 Sum_probs=77.0
Q ss_pred CCCCCEEEEECCCCCchhhHHHhHh------------------hhcCCcEEEEeccC-CCCCC---------ChhHHHHH
Q 004396 176 LKGSPTLLFLPGIDGLGLGLILHHK------------------PLGKAFEVRCLHIP-VYDRT---------PFEGLVKF 227 (756)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~~~~~~------------------~L~~gy~Vi~~Dl~-G~G~S---------s~~~~a~d 227 (756)
.++.|++|+++|.+|++..+..+.+ .+.+...++.+|.| |+|.| +.++.++|
T Consensus 74 ~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d 153 (462)
T PTZ00472 74 NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSED 153 (462)
T ss_pred CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHH
Confidence 4578999999999888876533220 12345789999986 88877 35678899
Q ss_pred HHHHHHHhhccCC---CCCEEEEEeChhhHHHHHHHHhC----------CCcceEEEEeCCCCcC
Q 004396 228 VEETVRREHASSP---EKPIYLVGDSFGGCLALAVAARN----------PTIDLILILSNPATSF 279 (756)
Q Consensus 228 v~~~i~~l~~~~~---~~~v~LvGhS~GG~vAl~~A~~~----------P~~v~~lVLi~p~~~~ 279 (756)
+.++++......+ ..+++|+|||+||.++..+|.+. +-.++|+++-++....
T Consensus 154 ~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred HHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 9998887654444 47999999999999998888652 1247899998887643
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.71 E-value=8.8e-08 Score=97.12 Aligned_cols=100 Identities=17% Similarity=0.204 Sum_probs=72.2
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh---------cCCcEEEEeccCCCCCC----ChhHHHHHHHHHHHHhhccC-----
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL---------GKAFEVRCLHIPVYDRT----PFEGLVKFVEETVRREHASS----- 239 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L---------~~gy~Vi~~Dl~G~G~S----s~~~~a~dv~~~i~~l~~~~----- 239 (756)
++.+|||+||.+++...++.+...+ ...++++++|+...... .+.+.++.+.+.++.+...+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 4678999999999998887776544 12588999998665322 45555555555555543333
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCC---CcceEEEEeCCCC
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPAT 277 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P---~~v~~lVLi~p~~ 277 (756)
+.++++||||||||.+|-.++...+ +.|+.+|.++++.
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 5689999999999999988876543 5789999887644
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=98.70 E-value=6.5e-07 Score=87.83 Aligned_cols=252 Identities=13% Similarity=0.101 Sum_probs=118.0
Q ss_pred CCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCC-CCC-------ChhHHHHHHHH
Q 004396 160 DGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVY-DRT-------PFEGLVKFVEE 230 (756)
Q Consensus 160 dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~-G~S-------s~~~~a~dv~~ 230 (756)
+|..++..+-.+..+-.+.+++||+-+|++.....|..++.+| .+||+|+.+|--.| |.| ++....+++..
T Consensus 11 ~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~ 90 (294)
T PF02273_consen 11 DGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLT 90 (294)
T ss_dssp TTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHH
T ss_pred CCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHH
Confidence 3444333333333322345789999999999999999999999 78999999997766 666 57788889999
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHH-HhHHhHhhhh
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH-CAVPYLLSYV 309 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 309 (756)
+++.+. ..+.+++-|++-|+.|-+|+..|++- .+.-+|...+...+ ...+.+... +.+...+..+
T Consensus 91 V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnl-----------r~TLe~al~~Dyl~~~i~~l 156 (294)
T PF02273_consen 91 VIDWLA-TRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNL-----------RDTLEKALGYDYLQLPIEQL 156 (294)
T ss_dssp HHHHHH-HTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-H-----------HHHHHHHHSS-GGGS-GGG-
T ss_pred HHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeH-----------HHHHHHHhccchhhcchhhC
Confidence 998888 44566899999999999999999854 36677776543311 111110000 0000000000
Q ss_pred cCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH---HHHHHhhhccCCCCcEEEEE
Q 004396 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS---ASAYANSRLHAVKAEVLVLA 386 (756)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~PvLvI~ 386 (756)
..+. .- .......-.+..+.... .-......+..+.+|++..+
T Consensus 157 p~dl-------------------------df---------eGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~ 202 (294)
T PF02273_consen 157 PEDL-------------------------DF---------EGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFT 202 (294)
T ss_dssp -SEE-------------------------EE---------TTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEE
T ss_pred CCcc-------------------------cc---------cccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEE
Confidence 0000 00 00000111111111110 00112356688899999999
Q ss_pred eCCCCCCCCHHHHHHHHHhC--CCeEEEEEcCCCCcccccchhh---HHHHhhhccccccCcCcccccccCCCCHHHHHH
Q 004396 387 SGKDNMLPSEDEAKRLNNSL--QNCIVRNFKDNGHTLLLEEGIS---LLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKY 461 (756)
Q Consensus 387 G~~D~~vp~~~~~~~l~~~l--~~~~l~~i~~aGH~~~~e~p~~---~~~~I~~~~f~rr~~~~~~v~d~~pPs~~e~~~ 461 (756)
+++|.++.... ...+.... +.+++..++|++|.+- |++.. |-+.+.++..--.....|...++..|+.+.+-.
T Consensus 203 A~~D~WV~q~e-V~~~~~~~~s~~~klysl~Gs~HdL~-enl~vlrnfy~svtkaaiald~~~~~l~~~~~ep~fe~lt~ 280 (294)
T PF02273_consen 203 ANDDDWVKQSE-VEELLDNINSNKCKLYSLPGSSHDLG-ENLVVLRNFYQSVTKAAIALDSGSLDLDIDIIEPTFEDLTI 280 (294)
T ss_dssp ETT-TTS-HHH-HHHHHTT-TT--EEEEEETT-SS-TT-SSHHHHHHHHHHHHHHHHHHHTT------------HHHHHH
T ss_pred eCCCccccHHH-HHHHHHhcCCCceeEEEecCccchhh-hChHHHHHHHHHHHHHHHhhcCCceeeeccccCCCHHHHHH
Confidence 99999998884 88877755 3789999999999765 33322 222222221111223344455667777766543
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.1e-07 Score=90.34 Aligned_cols=180 Identities=18% Similarity=0.183 Sum_probs=114.8
Q ss_pred CCCEEEEECCC----CCchhhHHHhHhhhcCCcEEEEeccCCCCCC-ChhHHHHHHHHHHHHhhccCCC-CCEEEEEeCh
Q 004396 178 GSPTLLFLPGI----DGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-PFEGLVKFVEETVRREHASSPE-KPIYLVGDSF 251 (756)
Q Consensus 178 ~~p~lV~lHG~----~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-s~~~~a~dv~~~i~~l~~~~~~-~~v~LvGhS~ 251 (756)
..+++||+||. +.-..........+..+|+|..+++--+..- ++++...++...++......++ +.+.+-|||.
T Consensus 66 ~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSa 145 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSA 145 (270)
T ss_pred CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEcccch
Confidence 47899999995 3334455556677788999999876444333 5666666665555554444554 3466678999
Q ss_pred hhHHHHHHHHh-CCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHH
Q 004396 252 GGCLALAVAAR-NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (756)
Q Consensus 252 GG~vAl~~A~~-~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (756)
|+.+|+.+..+ +..+|.|+++.++... +..+.+...++.+ +++..+
T Consensus 146 GAHLa~qav~R~r~prI~gl~l~~GvY~-----------------------l~EL~~te~g~dl---------gLt~~~- 192 (270)
T KOG4627|consen 146 GAHLAAQAVMRQRSPRIWGLILLCGVYD-----------------------LRELSNTESGNDL---------GLTERN- 192 (270)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHhhHhh-----------------------HHHHhCCcccccc---------Ccccch-
Confidence 99999988766 3357777777665321 1111111111111 000000
Q ss_pred HHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeE
Q 004396 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (756)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~ 410 (756)
.+... .....+..++.|+|++.|++|.-.-.+. .+.+...+.++.
T Consensus 193 ae~~S----------------------------------cdl~~~~~v~~~ilVv~~~~espklieQ-nrdf~~q~~~a~ 237 (270)
T KOG4627|consen 193 AESVS----------------------------------CDLWEYTDVTVWILVVAAEHESPKLIEQ-NRDFADQLRKAS 237 (270)
T ss_pred hhhcC----------------------------------ccHHHhcCceeeeeEeeecccCcHHHHh-hhhHHHHhhhcc
Confidence 00000 0014457788999999999998777774 788888888999
Q ss_pred EEEEcCCCCcccccc
Q 004396 411 VRNFKDNGHTLLLEE 425 (756)
Q Consensus 411 l~~i~~aGH~~~~e~ 425 (756)
+..++|.+|+-.+++
T Consensus 238 ~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 238 FTLFKNYDHYDIIEE 252 (270)
T ss_pred eeecCCcchhhHHHH
Confidence 999999999976653
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.4e-08 Score=80.62 Aligned_cols=55 Identities=11% Similarity=0.140 Sum_probs=50.6
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVR 233 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~ 233 (756)
+.+|+++||++.....|..+++.| +++|.|+++|+||||+| +++++++|+..+++
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 679999999999999999999999 78999999999999999 58999999988763
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.3e-07 Score=93.52 Aligned_cols=155 Identities=15% Similarity=0.157 Sum_probs=85.2
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh----cC-CcEEEEeccC-----CCCC-------------C----------------
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL----GK-AFEVRCLHIP-----VYDR-------------T---------------- 219 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L----~~-gy~Vi~~Dl~-----G~G~-------------S---------------- 219 (756)
++-||||||+++++..|+.+...| .+ .++.+.+|-| +-|- .
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 678999999999999998866555 45 7888888832 1110 0
Q ss_pred -ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC--------CCcceEEEEeCCCCcCCcCCcCCchhH
Q 004396 220 -PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN--------PTIDLILILSNPATSFGRSQLQPLFPI 290 (756)
Q Consensus 220 -s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~--------P~~v~~lVLi~p~~~~~~~~~~~~~~~ 290 (756)
.+++-.+.+.+.++..+. =..|+|+|.||.+|..++... ...++-+|++++.......
T Consensus 84 ~~~~~sl~~l~~~i~~~GP-----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~-------- 150 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGP-----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD-------- 150 (212)
T ss_dssp ---HHHHHHHHHHHHHH--------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---------
T ss_pred cCHHHHHHHHHHHHHhcCC-----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh--------
Confidence 134444455555555332 247999999999999888542 1245667777663311000
Q ss_pred HhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHH
Q 004396 291 LKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY 370 (756)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (756)
.+..
T Consensus 151 ----------------------------------------~~~~------------------------------------ 154 (212)
T PF03959_consen 151 ----------------------------------------YQEL------------------------------------ 154 (212)
T ss_dssp ----------------------------------------GTTT------------------------------------
T ss_pred ----------------------------------------hhhh------------------------------------
Confidence 0000
Q ss_pred HhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCC-eEEEEEcCCCCcccccch
Q 004396 371 ANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN-CIVRNFKDNGHTLLLEEG 426 (756)
Q Consensus 371 ~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~-~~l~~i~~aGH~~~~e~p 426 (756)
-.-.+|++|+|-|+|++|.+++++. .+.+.+.+.+ .++...+ +||.++....
T Consensus 155 --~~~~~i~iPtlHv~G~~D~~~~~~~-s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 155 --YDEPKISIPTLHVIGENDPVVPPER-SEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp --T--TT---EEEEEEETT-SSS-HHH-HHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred --hccccCCCCeEEEEeCCCCCcchHH-HHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 0115568999999999999999884 8999998877 7888887 5999886654
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=5.5e-07 Score=89.66 Aligned_cols=191 Identities=17% Similarity=0.096 Sum_probs=117.7
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC----------------------------hhHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP----------------------------FEGLVKFVE 229 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss----------------------------~~~~a~dv~ 229 (756)
..|.||-.||.++....|..+...-..||.|+.+|.||.|.|+ +.....|+.
T Consensus 82 ~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~ 161 (321)
T COG3458 82 KLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAV 161 (321)
T ss_pred ccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHH
Confidence 3789999999999999887777666889999999999999761 122333444
Q ss_pred HHHHHhhcc--CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhh
Q 004396 230 ETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS 307 (756)
Q Consensus 230 ~~i~~l~~~--~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (756)
.+++.+..- ....+|.+.|.|.||.+++.+|+.. .++++++++-|..+--.. + ++......+..+...+
T Consensus 162 ~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~-~rik~~~~~~Pfl~df~r-~------i~~~~~~~ydei~~y~- 232 (321)
T COG3458 162 RAVEILASLDEVDEERIGVTGGSQGGGLALAAAALD-PRIKAVVADYPFLSDFPR-A------IELATEGPYDEIQTYF- 232 (321)
T ss_pred HHHHHHhccCccchhheEEeccccCchhhhhhhhcC-hhhhcccccccccccchh-h------eeecccCcHHHHHHHH-
Confidence 444443221 1246899999999999999888876 478888887764432111 0 0000000000000000
Q ss_pred hhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEe
Q 004396 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLAS 387 (756)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G 387 (756)
+...+. ..+..+. +.. .+.....+++++|+|+..|
T Consensus 233 ---------------k~h~~~--e~~v~~T--------------------------L~y--fD~~n~A~RiK~pvL~svg 267 (321)
T COG3458 233 ---------------KRHDPK--EAEVFET--------------------------LSY--FDIVNLAARIKVPVLMSVG 267 (321)
T ss_pred ---------------HhcCch--HHHHHHH--------------------------Hhh--hhhhhHHHhhccceEEeec
Confidence 000000 1111111 100 1112344778999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCC-CeEEEEEcCCCCcccc
Q 004396 388 GKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLL 423 (756)
Q Consensus 388 ~~D~~vp~~~~~~~l~~~l~-~~~l~~i~~aGH~~~~ 423 (756)
--|+++|+.. .-.+.+.++ ..++.+++.-+|.-.-
T Consensus 268 L~D~vcpPst-qFA~yN~l~~~K~i~iy~~~aHe~~p 303 (321)
T COG3458 268 LMDPVCPPST-QFAAYNALTTSKTIEIYPYFAHEGGP 303 (321)
T ss_pred ccCCCCCChh-hHHHhhcccCCceEEEeeccccccCc
Confidence 9999999994 777777776 5678888877776543
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.2e-06 Score=87.09 Aligned_cols=111 Identities=19% Similarity=0.116 Sum_probs=77.9
Q ss_pred eeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCChhH---HHHHHHHHHH----Hhh
Q 004396 165 RWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEG---LVKFVEETVR----REH 236 (756)
Q Consensus 165 ~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~---~a~dv~~~i~----~l~ 236 (756)
.-+.+.+.|. -|+|+|+||+.-....|..++.++ +.||-|+++++-.--..+-.+ .+..+.+++. ++.
T Consensus 36 lI~tP~~~G~----yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~L 111 (307)
T PF07224_consen 36 LIVTPSEAGT----YPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVL 111 (307)
T ss_pred EEecCCcCCC----ccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhC
Confidence 3445666666 899999999999999999999999 789999999975332122111 2222222222 211
Q ss_pred c---cCCCCCEEEEEeChhhHHHHHHHHhCC--CcceEEEEeCCCCcC
Q 004396 237 A---SSPEKPIYLVGDSFGGCLALAVAARNP--TIDLILILSNPATSF 279 (756)
Q Consensus 237 ~---~~~~~~v~LvGhS~GG~vAl~~A~~~P--~~v~~lVLi~p~~~~ 279 (756)
. +..-.++.++|||.||-.|.++|..+. -.+++||-++|..+.
T Consensus 112 p~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 112 PENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred CCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 1 112358999999999999999998774 358899999997754
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.1e-06 Score=94.31 Aligned_cols=105 Identities=22% Similarity=0.201 Sum_probs=77.4
Q ss_pred CCCCEEEEECCCCC---chhhHHHhHhhh--cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccC-----CCCCEEE
Q 004396 177 KGSPTLLFLPGIDG---LGLGLILHHKPL--GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASS-----PEKPIYL 246 (756)
Q Consensus 177 ~~~p~lV~lHG~~~---s~~~~~~~~~~L--~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~-----~~~~v~L 246 (756)
.+.|+||++||.+. +..........+ ..++.|+++|+|-..+-++....+|+.+.+..+..+. ..++|.+
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v 156 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLRANAAELGIDPSRIAV 156 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHHhhhHhhCCCccceEE
Confidence 35899999999753 333443444444 5799999999998887777777777766666655332 2468999
Q ss_pred EEeChhhHHHHHHHHhCCC----cceEEEEeCCCCcCCc
Q 004396 247 VGDSFGGCLALAVAARNPT----IDLILILSNPATSFGR 281 (756)
Q Consensus 247 vGhS~GG~vAl~~A~~~P~----~v~~lVLi~p~~~~~~ 281 (756)
+|+|.||.+++.++..-.+ ...+.+++.|......
T Consensus 157 ~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 157 AGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred EecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 9999999999999876443 4678999999875543
|
|
| >PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.56 E-value=7.6e-07 Score=96.13 Aligned_cols=112 Identities=11% Similarity=-0.113 Sum_probs=74.1
Q ss_pred CcEEecccCCC---CCCCEEEEecCCCchhhHHHHHHHHHHhc-CceeccccccccccccccccCCCccHHHHHHHcCcc
Q 004396 485 GKIVKGLAGVP---NEGPVLLVGYHMLLGFELYSLVEEFLREK-NIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAV 560 (756)
Q Consensus 485 ~~~v~g~~~lp---~~gp~l~v~NH~~~~~d~~~l~~~~~~~~-~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v 560 (756)
.++++|-+... .+.++|+++||+++ +|.+++.....+.. -...+++++.++... |++++.+..+|.+
T Consensus 68 kv~V~gd~~~~~~~g~e~~lIisNHqS~-~D~l~l~~l~~r~~~l~~~~~vlKkeL~~i--------Pv~Gw~~~~~~~I 138 (376)
T PLN02380 68 KVQLYADEETFELMGKEHALVISNHRSD-IDWLVGWILAQRSGCLGSALAVMKKSSKFL--------PVIGWSMWFSEYV 138 (376)
T ss_pred EEEEEecchhhccCCCCcEEEEECCChh-HHHHHHHHHhhhcccccceeEeeHHHhhhc--------cHHHHHHHHcCCE
Confidence 34566644322 23579999999987 69987655433221 123566777766655 6888899999999
Q ss_pred ccCHHh---------HHHHhcC---CCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCce
Q 004396 561 PVAARN---------LFKLLST---KSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATI 616 (756)
Q Consensus 561 ~v~~~~---------~~~~l~~---g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~I 616 (756)
+++|+. +.+.+++ |..++|||||||..... ..-....|.+.|.|+
T Consensus 139 fIdR~~~~d~~~l~~~~~~l~~~~~~~wllIFPEGTR~~~~k-----------~~~s~~fA~~~glP~ 195 (376)
T PLN02380 139 FLERSWAKDENTLKSGFQRLKDFPRPFWLALFVEGTRFTQAK-----------LLAAQEYAASRGLPV 195 (376)
T ss_pred EecCCchhHHHHHHHHHHHHhhCCCccEEEEecCcCCCCchh-----------hHHHHHHHHHcCCCC
Confidence 999853 4455665 78899999999953221 112355677777776
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.56 E-value=3e-06 Score=88.98 Aligned_cols=228 Identities=16% Similarity=0.158 Sum_probs=125.8
Q ss_pred CCCCEEEEECCCCCchhhHHH-h-Hhhh-cCCcEEEEeccCCCCCC-----------Chh-------HHHHHHHHHHHHh
Q 004396 177 KGSPTLLFLPGIDGLGLGLIL-H-HKPL-GKAFEVRCLHIPVYDRT-----------PFE-------GLVKFVEETVRRE 235 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~-~-~~~L-~~gy~Vi~~Dl~G~G~S-----------s~~-------~~a~dv~~~i~~l 235 (756)
+.+|.+|.++|.|......+. + +..| .+|+..+.+..|-||.- .+. ..+.+...++..+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 358899999999886554443 2 4555 67999999999999843 122 2334445555555
Q ss_pred hccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhH
Q 004396 236 HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIK 315 (756)
Q Consensus 236 ~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (756)
..+ +..++.+.|.||||.+|..+|+..|..+..+-.+++..... .+ ....+..... +..+... +.+...
T Consensus 170 ~~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~--vF--t~Gvls~~i~-----W~~L~~q-~~~~~~ 238 (348)
T PF09752_consen 170 ERE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASV--VF--TEGVLSNSIN-----WDALEKQ-FEDTVY 238 (348)
T ss_pred Hhc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCc--ch--hhhhhhcCCC-----HHHHHHH-hcccch
Confidence 544 56699999999999999999999998887666666644210 00 0001111000 0000000 000000
Q ss_pred HHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCC-----CCcEEEEEeCCC
Q 004396 316 MAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAV-----KAEVLVLASGKD 390 (756)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-----~~PvLvI~G~~D 390 (756)
... .............. ..-......+.+. .+...... ...+.+. .-.+.++.+++|
T Consensus 239 ~~~---~~~~~~~~~~~~~~----------~~~~~~~~~Ea~~----~m~~~md~-~T~l~nf~~P~dp~~ii~V~A~~D 300 (348)
T PF09752_consen 239 EEE---ISDIPAQNKSLPLD----------SMEERRRDREALR----FMRGVMDS-FTHLTNFPVPVDPSAIIFVAAKND 300 (348)
T ss_pred hhh---hcccccCcccccch----------hhccccchHHHHH----HHHHHHHh-hccccccCCCCCCCcEEEEEecCc
Confidence 000 00000000000000 0000000111111 11111111 1222222 345889999999
Q ss_pred CCCCCHHHHHHHHHhCCCeEEEEEcCCCCcc-cccchhhHHHHhhh
Q 004396 391 NMLPSEDEAKRLNNSLQNCIVRNFKDNGHTL-LLEEGISLLTIIKG 435 (756)
Q Consensus 391 ~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~-~~e~p~~~~~~I~~ 435 (756)
.++|... ...+.+..|+++++.+++ ||.. ++-+.+.+.+.|.+
T Consensus 301 aYVPr~~-v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~D 344 (348)
T PF09752_consen 301 AYVPRHG-VLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYD 344 (348)
T ss_pred eEechhh-cchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHH
Confidence 9999984 889999999999999986 9975 55667777777764
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.8e-07 Score=93.25 Aligned_cols=96 Identities=27% Similarity=0.364 Sum_probs=82.0
Q ss_pred CEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhH
Q 004396 180 PTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGC 254 (756)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~ 254 (756)
|+|+|+|+.+|....|..+...|.+...|+.++.||++.- +++++++...+.|... .|..+++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~---QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRV---QPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccccCCHHHHHHHHHHHHHHh---CCCCCEEEEeeccccH
Confidence 5799999999999999999999988899999999999732 6777777777777664 4556899999999999
Q ss_pred HHHHHHHh---CCCcceEEEEeCCCCc
Q 004396 255 LALAVAAR---NPTIDLILILSNPATS 278 (756)
Q Consensus 255 vAl~~A~~---~P~~v~~lVLi~p~~~ 278 (756)
+|..+|.+ ..+.|..++++|+...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999976 3467999999998775
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.55 E-value=4e-07 Score=99.46 Aligned_cols=99 Identities=20% Similarity=0.190 Sum_probs=59.7
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------------C-----------------------
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------------P----------------------- 220 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------------s----------------------- 220 (756)
.-|+|||-||++++...|..++..| +.||-|+++|+|..-.. .
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 4799999999999999999999999 89999999999854211 0
Q ss_pred ------hhHHHHHHHHHHHHhhc---cC-------------------CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEE
Q 004396 221 ------FEGLVKFVEETVRREHA---SS-------------------PEKPIYLVGDSFGGCLALAVAARNPTIDLILIL 272 (756)
Q Consensus 221 ------~~~~a~dv~~~i~~l~~---~~-------------------~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVL 272 (756)
++.-+.++..+++.+.. .. .-.++.++|||+||+.++.++.+. .++++.|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 11112334444433321 00 024699999999999999888776 67889999
Q ss_pred eCCCC
Q 004396 273 SNPAT 277 (756)
Q Consensus 273 i~p~~ 277 (756)
+||+.
T Consensus 258 LD~W~ 262 (379)
T PF03403_consen 258 LDPWM 262 (379)
T ss_dssp ES---
T ss_pred eCCcc
Confidence 99854
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.5e-06 Score=89.65 Aligned_cols=104 Identities=16% Similarity=0.122 Sum_probs=75.2
Q ss_pred CCCEEEEECCCCCchh---hHHHhHh-------hh-cCCcEEEEeccCCCCCCC------hhHHHHHHHHHHHHhhccC-
Q 004396 178 GSPTLLFLPGIDGLGL---GLILHHK-------PL-GKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASS- 239 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~---~~~~~~~-------~L-~~gy~Vi~~Dl~G~G~Ss------~~~~a~dv~~~i~~l~~~~- 239 (756)
..|+||..|+++.... ....... .+ .+||.|++.|.||.|.|. ..+-++|..++|+-+..+.
T Consensus 19 ~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qpw 98 (272)
T PF02129_consen 19 PFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQPW 98 (272)
T ss_dssp SEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCTT
T ss_pred cccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCCC
Confidence 4789999999986541 1111111 14 789999999999999992 5556778888888776542
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCc
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGR 281 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~ 281 (756)
.+.+|.++|.|++|..++.+|+..|..+++++...+....-.
T Consensus 99 s~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 99 SNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp EEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred CCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 245899999999999999999989999999999887665433
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.4e-05 Score=78.82 Aligned_cols=234 Identities=12% Similarity=0.141 Sum_probs=135.6
Q ss_pred CCCCEEEEECCCCCchhhHHHhHhhh----cCCcEEEEeccCCCCCC----------------ChhHHHHHHHHHHHHhh
Q 004396 177 KGSPTLLFLPGIDGLGLGLILHHKPL----GKAFEVRCLHIPVYDRT----------------PFEGLVKFVEETVRREH 236 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L----~~gy~Vi~~Dl~G~G~S----------------s~~~~a~dv~~~i~~l~ 236 (756)
.+++.+++++|.+|....|..++..| .+.+.+|.+...||-.- +++++++--.++++...
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~ 106 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV 106 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC
Confidence 35889999999999999998888776 23467999998888532 47788888888888755
Q ss_pred ccCCCCCEEEEEeChhhHHHHHHHHhCC--CcceEEEEeCCCCc-CCcCCc-CCchhHHhhchhH-------HHHhHHhH
Q 004396 237 ASSPEKPIYLVGDSFGGCLALAVAARNP--TIDLILILSNPATS-FGRSQL-QPLFPILKAMPDE-------LHCAVPYL 305 (756)
Q Consensus 237 ~~~~~~~v~LvGhS~GG~vAl~~A~~~P--~~v~~lVLi~p~~~-~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~ 305 (756)
.+ +.+++++|||-|+++.+.+..... -.|.+.+++-|... ...++. ..+...+..++.. +....+.+
T Consensus 107 Pk--~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ 184 (301)
T KOG3975|consen 107 PK--DRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGF 184 (301)
T ss_pred CC--CCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHH
Confidence 44 569999999999999999987432 36888888877651 111110 1111111111100 00001111
Q ss_pred hhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHH----HHHHHHHHHhhhccCCCCc
Q 004396 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLK----LLKSASAYANSRLHAVKAE 381 (756)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~i~~P 381 (756)
+..+. ..........+++....... ...++.+..... .+........+.+.+-.+-
T Consensus 185 ir~~L------i~~~l~~~n~p~e~l~tal~--------------l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~ 244 (301)
T KOG3975|consen 185 IRFIL------IKFMLCGSNGPQEFLSTALF--------------LTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDS 244 (301)
T ss_pred HHHHH------HHHhcccCCCcHHHHhhHHH--------------hhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcE
Confidence 11000 00000000001111100000 000111111110 1111111112444555678
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhCCC--eEEEEEcCCCCcccccchhhHHHHhh
Q 004396 382 VLVLASGKDNMLPSEDEAKRLNNSLQN--CIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 382 vLvI~G~~D~~vp~~~~~~~l~~~l~~--~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
+.+.+|..|.++|.+. .+.+.+.+|. .++.+ ++.-|.....+.+..+..+.
T Consensus 245 l~Fyygt~DgW~p~~~-~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~ 297 (301)
T KOG3975|consen 245 LWFYYGTNDGWVPSHY-YDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVF 297 (301)
T ss_pred EEEEccCCCCCcchHH-HHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHH
Confidence 8999999999999995 9999999984 45555 77899999999888888776
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=4.9e-06 Score=76.28 Aligned_cols=153 Identities=19% Similarity=0.181 Sum_probs=105.3
Q ss_pred CCEEEEECCCCCchh--hHHHhHhhh-cCCcEEEEeccCCC-----CCC-------C-hhHHHHHHHHHHHHhhccCCCC
Q 004396 179 SPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVY-----DRT-------P-FEGLVKFVEETVRREHASSPEK 242 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~--~~~~~~~~L-~~gy~Vi~~Dl~G~-----G~S-------s-~~~~a~dv~~~i~~l~~~~~~~ 242 (756)
.-+||+-||.+++.+ .+...+..| .+|+.|..++++-. |+- + ..++...+.++-+. ....
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~----l~~g 89 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG----LAEG 89 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhc----ccCC
Confidence 347888999988776 466677888 67899999997533 211 1 34455555554444 3344
Q ss_pred CEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhh
Q 004396 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIE 322 (756)
Q Consensus 243 ~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (756)
+.++-|+||||-++..+|......|+++++++-+..... .|
T Consensus 90 pLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppG------------------------------KP--------- 130 (213)
T COG3571 90 PLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPG------------------------------KP--------- 130 (213)
T ss_pred ceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCC------------------------------Cc---------
Confidence 899999999999999999876666889998764321100 00
Q ss_pred cCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHH
Q 004396 323 NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (756)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l 402 (756)
++.. .+.|..+++|+|+.+|+.|.+-..+. ...
T Consensus 131 ---------e~~R------------------------------------t~HL~gl~tPtli~qGtrD~fGtr~~-Va~- 163 (213)
T COG3571 131 ---------EQLR------------------------------------TEHLTGLKTPTLITQGTRDEFGTRDE-VAG- 163 (213)
T ss_pred ---------ccch------------------------------------hhhccCCCCCeEEeecccccccCHHH-HHh-
Confidence 0000 15678899999999999999987763 422
Q ss_pred HHhCCCeEEEEEcCCCCcc
Q 004396 403 NNSLQNCIVRNFKDNGHTL 421 (756)
Q Consensus 403 ~~~l~~~~l~~i~~aGH~~ 421 (756)
+..-+..+++.+.++.|.+
T Consensus 164 y~ls~~iev~wl~~adHDL 182 (213)
T COG3571 164 YALSDPIEVVWLEDADHDL 182 (213)
T ss_pred hhcCCceEEEEeccCcccc
Confidence 2233578999999999975
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.1e-06 Score=88.08 Aligned_cols=99 Identities=16% Similarity=0.134 Sum_probs=71.0
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhc-C-C--cEEEEecc--CCC----C------------------C-CChhHHHHHHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLG-K-A--FEVRCLHI--PVY----D------------------R-TPFEGLVKFVE 229 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~-~-g--y~Vi~~Dl--~G~----G------------------~-Ss~~~~a~dv~ 229 (756)
..|.||+||++++...+..++..+. + + -.++.++- -|+ | + .+....++.+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 5579999999999999999998885 2 2 33433332 222 1 1 14677899999
Q ss_pred HHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCC-----cceEEEEeCCCC
Q 004396 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-----IDLILILSNPAT 277 (756)
Q Consensus 230 ~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~-----~v~~lVLi~p~~ 277 (756)
.++..|...+.-+++.+|||||||..++.++..+.. .+.++|.++.+.
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pf 143 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPF 143 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--T
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEecccc
Confidence 999999999988999999999999999999987542 578999988755
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.4e-06 Score=82.14 Aligned_cols=98 Identities=20% Similarity=0.158 Sum_probs=82.6
Q ss_pred CEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHH
Q 004396 180 PTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (756)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vA 256 (756)
..+||+.|=++-...=..+++.| ++|+.|+.+|-+-|=.+ +-++.+.|+..++++...+...++++|+|+|+|+-+.
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvl 82 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVL 82 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhH
Confidence 36788889888776667788899 78999999996555433 7899999999999998887778899999999999998
Q ss_pred HHHHHhCC----CcceEEEEeCCCC
Q 004396 257 LAVAARNP----TIDLILILSNPAT 277 (756)
Q Consensus 257 l~~A~~~P----~~v~~lVLi~p~~ 277 (756)
-....+.| ++|..++|++|..
T Consensus 83 P~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 83 PFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred HHHHhhCCHHHHhheeEEEEeccCC
Confidence 88888777 5799999999865
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.5e-06 Score=90.79 Aligned_cols=122 Identities=14% Similarity=0.080 Sum_probs=76.7
Q ss_pred cCcEEecccCCCC----CCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH----H
Q 004396 484 DGKIVKGLAGVPN----EGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL----K 555 (756)
Q Consensus 484 ~~~~v~g~~~lp~----~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~----~ 555 (756)
...+++|.|++++ ++|+|++++|... +|.+...... .+..+..++++.-. +.+..++ .
T Consensus 95 ~~v~i~g~e~l~~a~~~g~gvI~~t~H~Gn-wE~~~~~l~~---~~~~~~~v~~~~~n----------~~~~~~~~~~R~ 160 (298)
T PRK08419 95 NKVTFINEENLLDALKKKRPIIVTTAHYGY-WELFSLALAA---YYGAVSIVGRLLKS----------APINEMISKRRE 160 (298)
T ss_pred CcEEEECHHHHHHHHHcCCCEEEEeeCccH-HHHHHHHHHh---cCCCeEEEEeCCCC----------hHHHHHHHHHHH
Confidence 4678899999984 6899999999732 5876543332 23355555554332 2333333 3
Q ss_pred HcCccccC----HHhHHHHhcCCCeEEEEeCcchhccccCCccee----EEcCCchhHHHHHHHcCCceeeeeee
Q 004396 556 VMGAVPVA----ARNLFKLLSTKSHVLLYPGGAREALHYKGEEYK----LFWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 556 ~~g~v~v~----~~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~----l~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
..|.-.+. -..+.+.|++|+.|+|+|-.... .+.+..- ..-....|.++||.++|+||||+++.
T Consensus 161 ~~g~~~i~~~~~~r~~l~~Lk~g~~v~il~Dq~~~---~~~gv~v~FfG~~a~~~~g~a~LA~k~~apvvpv~~~ 232 (298)
T PRK08419 161 QFGIELIDKKGAMKELLKALKQGRALGILVDQNVV---PKEGVEVKFFNKRVTHTTIASILARRYNALIIPVFIF 232 (298)
T ss_pred HcCCeeEECccHHHHHHHHHHcCCeEEEEecCCCC---CCCCeEEecCCCCcccchhHHHHHHHHCCCEEEEEEE
Confidence 44543332 24577889999999999933211 0111111 11144589999999999999999994
|
|
| >COG2121 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.7e-06 Score=79.75 Aligned_cols=104 Identities=21% Similarity=0.324 Sum_probs=74.2
Q ss_pred CCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCH---------
Q 004396 494 VPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAA--------- 564 (756)
Q Consensus 494 lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~--------- 564 (756)
+-.++|+|+..=|.-+.+-. ..+. ..+.+..+..+..=. -+...++..+|.--|-.
T Consensus 42 ~~~~~p~I~afWHg~l~l~p----~~~~--~~~~~~amvS~s~DG---------EliA~~l~kfG~~~IRGSs~Kgg~~A 106 (214)
T COG2121 42 LANEKPGIVAFWHGQLALGP----FAFP--KGKKIYAMVSPSRDG---------ELIARLLEKFGLRVIRGSSNKGGISA 106 (214)
T ss_pred hhccCCeEEEEeccccccch----hhcc--CCCcEEEEEcCCcCH---------HHHHHHHHHcCceEEeccCCcchHHH
Confidence 66789999999998543322 2222 233455555543322 36778899999866632
Q ss_pred -HhHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeee
Q 004396 565 -RNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 565 -~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
.++.+.|++|.++.|-|.|-+...+ .-..|.+-+|.++|+||+|+++.
T Consensus 107 lr~l~k~Lk~G~~i~itpDgPkGp~~----------~~~~Gii~LA~~sg~pi~pv~~~ 155 (214)
T COG2121 107 LRALLKALKQGKSIAITPDGPKGPVH----------KIGDGIIALAQKSGVPIIPVGVA 155 (214)
T ss_pred HHHHHHHHhCCCcEEEcCCCCCCCce----------eccchhhHhhHhcCCCeEEEEEe
Confidence 2477889999999999999764332 23589999999999999999995
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.35 E-value=1e-06 Score=88.72 Aligned_cols=49 Identities=20% Similarity=0.441 Sum_probs=30.3
Q ss_pred hccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhC-----C-CeEEEEEcCCCCccc
Q 004396 374 RLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL-----Q-NCIVRNFKDNGHTLL 422 (756)
Q Consensus 374 ~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l-----~-~~~l~~i~~aGH~~~ 422 (756)
.+.++++|+|+|.|++|.+.|....++.+.+.+ + +.++..++++||++.
T Consensus 110 pvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~ 164 (213)
T PF08840_consen 110 PVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIE 164 (213)
T ss_dssp -GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---
T ss_pred cHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceec
Confidence 357789999999999999999886555555443 2 468889999999974
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.6e-06 Score=82.89 Aligned_cols=149 Identities=19% Similarity=0.241 Sum_probs=106.6
Q ss_pred CEEEEECCCCCchhh-HHHhHhhh-cCCcEEEEecc-CCCCCC---------------ChhHHHHHHHHHHHHhhccCCC
Q 004396 180 PTLLFLPGIDGLGLG-LILHHKPL-GKAFEVRCLHI-PVYDRT---------------PFEGLVKFVEETVRREHASSPE 241 (756)
Q Consensus 180 p~lV~lHG~~~s~~~-~~~~~~~L-~~gy~Vi~~Dl-~G~G~S---------------s~~~~a~dv~~~i~~l~~~~~~ 241 (756)
..||.+--.-|.... -+..+..+ ..||.|+++|+ +|--.| +.+-.-+++..+++.+......
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 466666665444443 55666777 57999999996 663322 2344456777777777766667
Q ss_pred CCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhh
Q 004396 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNI 321 (756)
Q Consensus 242 ~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (756)
++|-++|.+|||.++..+.+..| .+.+++..-|... +
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~---------------------------------d--------- 156 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV---------------------------------D--------- 156 (242)
T ss_pred ceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC---------------------------------C---------
Confidence 89999999999999998888876 5666666544110 0
Q ss_pred hcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHH
Q 004396 322 ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKR 401 (756)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~ 401 (756)
......+++|+|++.|+.|.++|++. ...
T Consensus 157 --------------------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~-v~~ 185 (242)
T KOG3043|consen 157 --------------------------------------------------SADIANVKAPILFLFAELDEDVPPKD-VKA 185 (242)
T ss_pred --------------------------------------------------hhHHhcCCCCEEEEeecccccCCHHH-HHH
Confidence 03446778999999999999999994 777
Q ss_pred HHHhCC-----CeEEEEEcCCCCccc
Q 004396 402 LNNSLQ-----NCIVRNFKDNGHTLL 422 (756)
Q Consensus 402 l~~~l~-----~~~l~~i~~aGH~~~ 422 (756)
+.+.+. +.+++++++.+|..+
T Consensus 186 ~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 186 WEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred HHHHHhcCcccceeEEEcCCccchhh
Confidence 777664 347999999999644
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.7e-05 Score=74.75 Aligned_cols=89 Identities=15% Similarity=0.201 Sum_probs=55.3
Q ss_pred EEEECCCCCchhh--HHHh-HhhhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHH
Q 004396 182 LLFLPGIDGLGLG--LILH-HKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (756)
Q Consensus 182 lV~lHG~~~s~~~--~~~~-~~~L~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~ 258 (756)
|+++||+.++..+ .... ...+....+++ +++ ..+..++ .+.+.+.+..+......+++.|||+|+||+.|..
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~--~~~P~~a-~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~ 76 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYS--TLHPKHD-MQHLLKEVDKMLQLSDDERPLICGVGLGGYWAER 76 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECC--CCCHHHH-HHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHH
Confidence 7899999999888 5332 22333334444 444 1222222 3344444443221111247899999999999999
Q ss_pred HHHhCCCcceEEEEeCCCCc
Q 004396 259 VAARNPTIDLILILSNPATS 278 (756)
Q Consensus 259 ~A~~~P~~v~~lVLi~p~~~ 278 (756)
+|.++. -..||+||+..
T Consensus 77 La~~~g---~~aVLiNPAv~ 93 (180)
T PRK04940 77 IGFLCG---IRQVIFNPNLF 93 (180)
T ss_pred HHHHHC---CCEEEECCCCC
Confidence 999985 26889999763
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.5e-05 Score=83.05 Aligned_cols=81 Identities=20% Similarity=0.242 Sum_probs=63.8
Q ss_pred hHhhhcCCcEEEEeccCCC---CCCChhHHHHHHHHHHHHhhccCCCC-CEEEEEeChhhHHHHHHHHhCCCcceEEEEe
Q 004396 198 HHKPLGKAFEVRCLHIPVY---DRTPFEGLVKFVEETVRREHASSPEK-PIYLVGDSFGGCLALAVAARNPTIDLILILS 273 (756)
Q Consensus 198 ~~~~L~~gy~Vi~~Dl~G~---G~Ss~~~~a~dv~~~i~~l~~~~~~~-~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi 273 (756)
+-.+|..|+.|+-+.+.-. |+ +++|.+.....+++.+....+.. +.+|||.+.||..++.+|+.+|+.+.-+|+.
T Consensus 93 vG~AL~~GHPvYFV~F~p~P~pgQ-Tl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvla 171 (581)
T PF11339_consen 93 VGVALRAGHPVYFVGFFPEPEPGQ-TLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLA 171 (581)
T ss_pred HHHHHHcCCCeEEEEecCCCCCCC-cHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeec
Confidence 4467777888877765322 33 68888888888888877776644 8999999999999999999999999888887
Q ss_pred CCCCcC
Q 004396 274 NPATSF 279 (756)
Q Consensus 274 ~p~~~~ 279 (756)
..+.++
T Consensus 172 GaPlsy 177 (581)
T PF11339_consen 172 GAPLSY 177 (581)
T ss_pred CCCccc
Confidence 666544
|
Their function is unknown. |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.22 E-value=9.6e-07 Score=92.89 Aligned_cols=199 Identities=19% Similarity=0.186 Sum_probs=119.3
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCC--CC--------C-----hhHHHHHHHHHHHHhhcc---
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYD--RT--------P-----FEGLVKFVEETVRREHAS--- 238 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G--~S--------s-----~~~~a~dv~~~i~~l~~~--- 238 (756)
..|+|++-||.|+....|..+++.+ +.||-|.++|++|-. +. + +-+-..|+..+++.+...
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 4789999999999999999999999 778999999999953 22 1 223444555555544322
Q ss_pred ------CCCCCEEEEEeChhhHHHHHHHHhCCCcceE--------EEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHh
Q 004396 239 ------SPEKPIYLVGDSFGGCLALAVAARNPTIDLI--------LILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (756)
Q Consensus 239 ------~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~--------lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (756)
....+|.++|||+||+.++.++....+.... .+...+...- . .....-.. ...+
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~-------~-~~l~q~~a---v~~~- 217 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLN-------G-RLLNQCAA---VWLP- 217 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcC-------h-hhhccccc---cccc-
Confidence 2246899999999999999988554321110 1111110000 0 00000000 0000
Q ss_pred HhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEE
Q 004396 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (756)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLv 384 (756)
.......++ .........+.... .+. ..-+.+++.|+++
T Consensus 218 ~~~~~~rDp------------------------------riravvA~~p~~~~--------~Fg---~tgl~~v~~P~~~ 256 (365)
T COG4188 218 RQAYDLRDP------------------------------RIRAVVAINPALGM--------IFG---TTGLVKVTDPVLL 256 (365)
T ss_pred hhhhccccc------------------------------cceeeeeccCCccc--------ccc---cccceeeecceee
Confidence 000000000 00000000000000 000 2567889999999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhCCCe--EEEEEcCCCCcccccchhhH
Q 004396 385 LASGKDNMLPSEDEAKRLNNSLQNC--IVRNFKDNGHTLLLEEGISL 429 (756)
Q Consensus 385 I~G~~D~~vp~~~~~~~l~~~l~~~--~l~~i~~aGH~~~~e~p~~~ 429 (756)
+.|..|.+.|...+..+....+++. -+..++++.|+-++|-.++.
T Consensus 257 ~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 257 AAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 9999999988887777788888876 68889999999999988875
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.6e-05 Score=76.07 Aligned_cols=48 Identities=21% Similarity=0.379 Sum_probs=42.4
Q ss_pred cCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccc
Q 004396 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEE 425 (756)
Q Consensus 376 ~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~ 425 (756)
..+++|.|-|.|+.|.+++.+. .+.|++.++++.+..-+ +||+++-.+
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~-s~~L~~~~~~a~vl~Hp-ggH~VP~~~ 207 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSER-SEQLAESFKDATVLEHP-GGHIVPNKA 207 (230)
T ss_pred cCCCCCeeEEecccceeecchH-HHHHHHhcCCCeEEecC-CCccCCCch
Confidence 6789999999999999999994 99999999999776666 599998665
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.20 E-value=6.4e-05 Score=80.13 Aligned_cols=103 Identities=18% Similarity=0.143 Sum_probs=73.8
Q ss_pred CCCCEEEEECCCCCc-----hhhHHHhHhhh--cCCcEEEEeccCCCCCCC----hhHHHHHHHHHHHH--hhccCCCCC
Q 004396 177 KGSPTLLFLPGIDGL-----GLGLILHHKPL--GKAFEVRCLHIPVYDRTP----FEGLVKFVEETVRR--EHASSPEKP 243 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s-----~~~~~~~~~~L--~~gy~Vi~~Dl~G~G~Ss----~~~~a~dv~~~i~~--l~~~~~~~~ 243 (756)
...|.|||+||.|.. ...|..+...+ .-+.-|+.+|+|=--+.. ++|..+.+.-+.++ +.......+
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~r 167 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNSWLKLGADPSR 167 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhHHHHhCCCccc
Confidence 468999999997543 34566677776 346789999998777664 55555555555553 222223457
Q ss_pred EEEEEeChhhHHHHHHHHhC------CCcceEEEEeCCCCcC
Q 004396 244 IYLVGDSFGGCLALAVAARN------PTIDLILILSNPATSF 279 (756)
Q Consensus 244 v~LvGhS~GG~vAl~~A~~~------P~~v~~lVLi~p~~~~ 279 (756)
|+|+|-|.||.+|..+|.+. +.++++.||+-|....
T Consensus 168 v~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 168 VFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred EEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 99999999999999998652 3679999999997744
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.7e-06 Score=90.01 Aligned_cols=102 Identities=18% Similarity=0.124 Sum_probs=65.8
Q ss_pred CCCCEEEEECCCCCch--hhHH-HhHhhh-c---CCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhc--cCC
Q 004396 177 KGSPTLLFLPGIDGLG--LGLI-LHHKPL-G---KAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHA--SSP 240 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~--~~~~-~~~~~L-~---~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~--~~~ 240 (756)
.+.|++|++|||.++. ..|. .+.+.+ . ..+.|+++|+...-.. ......+.+..+|..+.. ..+
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 3689999999998887 3454 345544 3 4799999998433222 134445555555555541 233
Q ss_pred CCCEEEEEeChhhHHHHHHHHhCCC--cceEEEEeCCCCc
Q 004396 241 EKPIYLVGDSFGGCLALAVAARNPT--IDLILILSNPATS 278 (756)
Q Consensus 241 ~~~v~LvGhS~GG~vAl~~A~~~P~--~v~~lVLi~p~~~ 278 (756)
..+++|||||+||.+|-.++..... ++..++.+||+..
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 5689999999999999999988877 8999999999773
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.1e-05 Score=92.13 Aligned_cols=79 Identities=13% Similarity=0.042 Sum_probs=62.7
Q ss_pred Hhhh-cCCcEEEEeccCCCCCCC-----h-hHHHHHHHHHHHHhhcc----------------CCCCCEEEEEeChhhHH
Q 004396 199 HKPL-GKAFEVRCLHIPVYDRTP-----F-EGLVKFVEETVRREHAS----------------SPEKPIYLVGDSFGGCL 255 (756)
Q Consensus 199 ~~~L-~~gy~Vi~~Dl~G~G~Ss-----~-~~~a~dv~~~i~~l~~~----------------~~~~~v~LvGhS~GG~v 255 (756)
.+.| .+||.|+..|.||+|.|+ . .+-.+|..++|+-+..+ ..+.+|.++|.|+||.+
T Consensus 272 ~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 272 NDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred HHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 3455 789999999999999992 2 44566777777776532 11469999999999999
Q ss_pred HHHHHHhCCCcceEEEEeCCCC
Q 004396 256 ALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 256 Al~~A~~~P~~v~~lVLi~p~~ 277 (756)
++.+|+..|+.++++|..++..
T Consensus 352 ~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 352 PNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHhhCCCcceEEEeeCCCC
Confidence 9999999999999999987654
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.8e-05 Score=75.39 Aligned_cols=169 Identities=20% Similarity=0.192 Sum_probs=112.2
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCC-------------------------CChhHHHHHHHHHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDR-------------------------TPFEGLVKFVEETV 232 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~-------------------------Ss~~~~a~dv~~~i 232 (756)
..+||++||.+.++..|..+++.| -++...+++.-|-.-- +++...++.+..++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 347999999999999998877776 3444555553221111 13555677777888
Q ss_pred HHhhccC-CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcC
Q 004396 233 RREHASS-PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMG 311 (756)
Q Consensus 233 ~~l~~~~-~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (756)
++.-... +..++.+-|.||||++++..+..+|..+.+++-..+.... ....++ .
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~----------~~~~~~--------~------- 137 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPR----------ASIGLP--------G------- 137 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccccccc----------chhhcc--------C-------
Confidence 7765432 2357899999999999999999998777777665442100 000000 0
Q ss_pred ChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCC
Q 004396 312 DPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDN 391 (756)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~ 391 (756)
+. .. .+ ..|++..||+.|+
T Consensus 138 ----------------------~~-------------------------------------~~-~~-~~~i~~~Hg~~d~ 156 (206)
T KOG2112|consen 138 ----------------------WL-------------------------------------PG-VN-YTPILLCHGTADP 156 (206)
T ss_pred ----------------------Cc-------------------------------------cc-cC-cchhheecccCCc
Confidence 00 00 00 5699999999999
Q ss_pred CCCCHHHHHHHHHhC----CCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 392 MLPSEDEAKRLNNSL----QNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 392 ~vp~~~~~~~l~~~l----~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
++|... .+.-.+.+ ..++++.+++.+|...-+.-+++...+.
T Consensus 157 ~vp~~~-g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~~ 202 (206)
T KOG2112|consen 157 LVPFRF-GEKSAQFLKSLGVRVTFKPYPGLGHSTSPQELDDLKSWIK 202 (206)
T ss_pred eeehHH-HHHHHHHHHHcCCceeeeecCCccccccHHHHHHHHHHHH
Confidence 999984 55444443 3589999999999988776666666555
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.13 E-value=3.2e-06 Score=84.67 Aligned_cols=83 Identities=17% Similarity=0.141 Sum_probs=55.6
Q ss_pred CEEEEECCCCC-chhhHHHhHhhh-cCCcE---EEEeccCCCCCCC-------hhHHHHHHHHHHHHhhccCCCCCEEEE
Q 004396 180 PTLLFLPGIDG-LGLGLILHHKPL-GKAFE---VRCLHIPVYDRTP-------FEGLVKFVEETVRREHASSPEKPIYLV 247 (756)
Q Consensus 180 p~lV~lHG~~~-s~~~~~~~~~~L-~~gy~---Vi~~Dl~G~G~Ss-------~~~~a~dv~~~i~~l~~~~~~~~v~Lv 247 (756)
.||||+||.++ ....|..+.+.| ++||. |+++++-....+. ..+.++++.++|+......+. +|-||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 36999999998 567899999999 78898 8999985555422 223446788888877765666 99999
Q ss_pred EeChhhHHHHHHHHhC
Q 004396 248 GDSFGGCLALAVAARN 263 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~ 263 (756)
||||||.++-.+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999988777543
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.1e-05 Score=80.23 Aligned_cols=100 Identities=16% Similarity=0.074 Sum_probs=71.7
Q ss_pred CCCEEEEECCCCCchhhHHH----hHhhhcCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEE
Q 004396 178 GSPTLLFLPGIDGLGLGLIL----HHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIY 245 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~----~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~ 245 (756)
++..+||+||+..+...-.. +...+.-...++++.||..|.. +...-...+..+++.+....+.++|+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 46799999999888654322 2233333348999999998854 23344566777777776666678999
Q ss_pred EEEeChhhHHHHHHHHh----CC-----CcceEEEEeCCCC
Q 004396 246 LVGDSFGGCLALAVAAR----NP-----TIDLILILSNPAT 277 (756)
Q Consensus 246 LvGhS~GG~vAl~~A~~----~P-----~~v~~lVLi~p~~ 277 (756)
|++||||+.+.+.+... .+ ..+..+||++|-.
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 99999999999988754 11 3577888888744
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.11 E-value=6e-06 Score=91.42 Aligned_cols=87 Identities=9% Similarity=0.009 Sum_probs=69.8
Q ss_pred CchhhHHHhHhhh-cCCcEEEEeccCCCCCC-----ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC
Q 004396 190 GLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN 263 (756)
Q Consensus 190 ~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~ 263 (756)
.....|..+++.| ..||. ...|++|+|.+ ..++..+++.++++.+....+.++++|+||||||.++..++..+
T Consensus 105 ~~~~~~~~li~~L~~~GY~-~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYK-EGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred chHHHHHHHHHHHHHcCCc-cCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHC
Confidence 4567899999999 45554 48899999976 25666777777777766656677999999999999999999988
Q ss_pred CC----cceEEEEeCCCC
Q 004396 264 PT----IDLILILSNPAT 277 (756)
Q Consensus 264 P~----~v~~lVLi~p~~ 277 (756)
|+ .|+++|.++++.
T Consensus 184 p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred CHhHHhHhccEEEECCCC
Confidence 85 478888887755
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.3e-05 Score=93.00 Aligned_cols=178 Identities=16% Similarity=0.162 Sum_probs=114.8
Q ss_pred CCCCEEEEECCCCCchh-------hHHHhHhhh-cCCcEEEEeccCCCCCC---------------ChhHHHHHHHHHHH
Q 004396 177 KGSPTLLFLPGIDGLGL-------GLILHHKPL-GKAFEVRCLHIPVYDRT---------------PFEGLVKFVEETVR 233 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~-------~~~~~~~~L-~~gy~Vi~~Dl~G~G~S---------------s~~~~a~dv~~~i~ 233 (756)
+.-|+||.+||.+++.. .|... .. ..++.|+.+|.||-|.. +.+|+...+..+++
T Consensus 524 ~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~ 601 (755)
T KOG2100|consen 524 KKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLK 601 (755)
T ss_pred CCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHh
Confidence 35688888999887332 23222 22 57899999999998754 36666666777776
Q ss_pred HhhccCCCCCEEEEEeChhhHHHHHHHHhCC-CcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCC
Q 004396 234 REHASSPEKPIYLVGDSFGGCLALAVAARNP-TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGD 312 (756)
Q Consensus 234 ~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P-~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (756)
....+ .+++.+.|+|+||.+++.++...| +.++..+.++|++.+........ .. .++.
T Consensus 602 ~~~iD--~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~t---------------er----ymg~ 660 (755)
T KOG2100|consen 602 LPFID--RSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYT---------------ER----YMGL 660 (755)
T ss_pred ccccc--HHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeeccccc---------------Hh----hcCC
Confidence 65333 568999999999999999999998 56666699999774321000000 00 0000
Q ss_pred hhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcE-EEEEeCCCC
Q 004396 313 PIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEV-LVLASGKDN 391 (756)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-LvI~G~~D~ 391 (756)
+ . + ....+.+ ......+..++.|. |++||+.|.
T Consensus 661 p-------------~-~-~~~~y~e-------------------------------~~~~~~~~~~~~~~~LliHGt~Dd 694 (755)
T KOG2100|consen 661 P-------------S-E-NDKGYEE-------------------------------SSVSSPANNIKTPKLLLIHGTEDD 694 (755)
T ss_pred C-------------c-c-ccchhhh-------------------------------ccccchhhhhccCCEEEEEcCCcC
Confidence 0 0 0 0000000 00013345556666 999999999
Q ss_pred CCCCHHHHHHHHHhCC----CeEEEEEcCCCCccccc
Q 004396 392 MLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLE 424 (756)
Q Consensus 392 ~vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e 424 (756)
.+..++ +.++.+.+. .+++.++|+..|.+-.-
T Consensus 695 nVh~q~-s~~~~~aL~~~gv~~~~~vypde~H~is~~ 730 (755)
T KOG2100|consen 695 NVHFQQ-SAILIKALQNAGVPFRLLVYPDENHGISYV 730 (755)
T ss_pred CcCHHH-HHHHHHHHHHCCCceEEEEeCCCCcccccc
Confidence 999885 777776663 47999999999987653
|
|
| >COG3176 Putative hemolysin [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.6e-06 Score=88.74 Aligned_cols=152 Identities=13% Similarity=0.089 Sum_probs=106.0
Q ss_pred eeeeecccCcEEecccCCCCCCCEEEEecCCCchhhHHHHHHHHHHhcCceecccccccccc-ccc--cccCCCccHHHH
Q 004396 477 VMLSTLEDGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFL-GRL--ENSSNEFGMTDW 553 (756)
Q Consensus 477 ~~~~t~~~~~~v~g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~-~~~--~~~~p~~~~~~~ 553 (756)
+|...+..++...+.+.+|+.++++.|+|| ++..|....... .++.....|.+++...-+ +++ +..++.- +.+-
T Consensus 59 vf~~el~~~l~~~~~~~~~d~d~fd~VcnH-lgv~Dg~~~~d~-~~~~vgtyR~l~~~~A~r~~~~ys~~ef~v~-~~~~ 135 (292)
T COG3176 59 VFSEELDARLDAAALERIPDQDRFDIVCNH-LGVRDGVIVADL-LKQLVGTYRLLANAQALRAGGFYSALEFPVD-WLEE 135 (292)
T ss_pred hhhhhcCcccccccccccCCCCCeeEeccc-cceecccchhhh-HhhhcCceEEeehHHHHHhCCCcccccccee-eecc
Confidence 455555667778889999999999999999 666688665554 566667888898843332 221 1111100 0000
Q ss_pred HHHcCccccCHHhHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeeecccchhhhhcC
Q 004396 554 LKVMGAVPVAARNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAVGEDDIADLVLD 633 (756)
Q Consensus 554 ~~~~g~v~v~~~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~G~~~~~~~~~~ 633 (756)
.+....+...|..+.+.+++|.+|++||.|..+.... +.++.+ ++...+.+++.+++++++|+++.|.+...+++..
T Consensus 136 ~~~~k~~e~grscv~~~yr~g~tl~lfwaG~~ay~~~--g~~~~~-~gcaS~~~~~~~~~a~~~p~~~~~r~~~~f~~~~ 212 (292)
T COG3176 136 LRPKKFNELGRSCVHREYREGRTLLLFWAGLVAYLDK--GRLDDM-PGCASVPGLPRKHGAALAPVHHNGRNSALFYLAA 212 (292)
T ss_pred cChHHHHHHHHHHHHHHHhcCCEEEEeccchhHHhhc--cCcccC-ccccccccchhhcccccchhheecccCCchhhhc
Confidence 1111144556677889999999999999999877654 445544 7778888899999999999999999888666655
Q ss_pred c
Q 004396 634 Y 634 (756)
Q Consensus 634 ~ 634 (756)
.
T Consensus 213 ~ 213 (292)
T COG3176 213 K 213 (292)
T ss_pred c
Confidence 3
|
|
| >PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.9e-05 Score=82.51 Aligned_cols=121 Identities=14% Similarity=0.074 Sum_probs=75.9
Q ss_pred cCcEE--ecccCCCC----CCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccc----cccccccccccCCCccHHHH
Q 004396 484 DGKIV--KGLAGVPN----EGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAH----PEIFLGRLENSSNEFGMTDW 553 (756)
Q Consensus 484 ~~~~v--~g~~~lp~----~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~----~~~f~~~~~~~~p~~~~~~~ 553 (756)
...++ +|.|++.+ ++|+|+++.|... +|....... ..+..+..++. +.++. .+...
T Consensus 88 ~~v~i~~~g~e~l~~a~~~gkgvIllt~H~Gn-wE~~~~~l~---~~~~~~~~vyr~~~n~~~~~----------~~~~~ 153 (298)
T PRK07920 88 ARVRVSIEGLEHLDAALAAGRGVVLALPHSGN-WDMAGAWLV---QHHGPFTTVAERLKPESLYE----------RFVAY 153 (298)
T ss_pred hhhhhccCCHHHHHHHHhcCCCeEEEecCCCH-HHHHHHHHH---HcCCCeEEEEeccCCHHHHH----------HHHHH
Confidence 34567 89988874 5799999999732 577543322 23344444443 33332 12234
Q ss_pred HHHcCc--cccCH------HhHHHHhcCCCeEEEEeCcchhccccCCcceeE----EcCCchhHHHHHHHcCCceeeeee
Q 004396 554 LKVMGA--VPVAA------RNLFKLLSTKSHVLLYPGGAREALHYKGEEYKL----FWPEQQEFVRMAARFGATIVPFGA 621 (756)
Q Consensus 554 ~~~~g~--v~v~~------~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l----~~~~~~gf~rlA~~~g~~IVPv~~ 621 (756)
-...|. ++... ..+.++|++|+.|+|.|..... . .+..-- .-...+|.++||.++|+||||+++
T Consensus 154 R~~~g~~~i~~~~~~~~~~r~ii~~Lk~g~~v~il~Dq~~~---~-~g~~v~FFG~~a~t~~g~a~LA~~~~apVvp~~~ 229 (298)
T PRK07920 154 RESLGFEVLPLTGGERPPFEVLAERLRAGGVVCLLADRDLT---R-SGVEVDFFGERTRMPAGPAALALETGAALLPVHL 229 (298)
T ss_pred HHhcCCEEEecCCCCchHHHHHHHHHHcCCeEEEEeccCcc---C-CCCEEeeCCCCCCCCCCHHHHHHHHCCcEEEEEE
Confidence 445664 44332 2367889999999999988642 1 111111 113458999999999999999999
Q ss_pred e
Q 004396 622 V 622 (756)
Q Consensus 622 ~ 622 (756)
.
T Consensus 230 ~ 230 (298)
T PRK07920 230 W 230 (298)
T ss_pred E
Confidence 4
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.96 E-value=3.8e-05 Score=78.10 Aligned_cols=98 Identities=16% Similarity=0.170 Sum_probs=67.7
Q ss_pred CCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC----------------------------C-----hh
Q 004396 177 KGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT----------------------------P-----FE 222 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S----------------------------s-----~~ 222 (756)
++-|++||-||++++...|..+.-.| +.||-|.++++|-+..+ . -+
T Consensus 116 ~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNe 195 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNE 195 (399)
T ss_pred CCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCH
Confidence 35799999999999999999999999 78999999999877543 0 01
Q ss_pred HH---HHHH---HHHHHHhhc--------------------cCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCC
Q 004396 223 GL---VKFV---EETVRREHA--------------------SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (756)
Q Consensus 223 ~~---a~dv---~~~i~~l~~--------------------~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p 275 (756)
+. ++.. ..+++++.. +....++.++|||+||+.++...+.+ ..++..|+++.
T Consensus 196 qv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~ 273 (399)
T KOG3847|consen 196 QVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeee
Confidence 11 1111 222222211 11224689999999999998777665 45667777665
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00052 Score=72.55 Aligned_cols=80 Identities=21% Similarity=0.145 Sum_probs=51.4
Q ss_pred hHhhhcCCcEEEEeccCCCCCC--ChhHHHHHHHHHHHHhhcc------CCCCCEEEEEeChhhHHHHHHHHh----CCC
Q 004396 198 HHKPLGKAFEVRCLHIPVYDRT--PFEGLVKFVEETVRREHAS------SPEKPIYLVGDSFGGCLALAVAAR----NPT 265 (756)
Q Consensus 198 ~~~~L~~gy~Vi~~Dl~G~G~S--s~~~~a~dv~~~i~~l~~~------~~~~~v~LvGhS~GG~vAl~~A~~----~P~ 265 (756)
+...|++||.|++.|+.|.|.. .-...+..+.+.++..+.. ....++.++|||-||.-++.+|.. -||
T Consensus 19 l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YApe 98 (290)
T PF03583_consen 19 LAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAPE 98 (290)
T ss_pred HHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCcc
Confidence 3455699999999999999874 1133334444444433211 134689999999999988766643 344
Q ss_pred c---ceEEEEeCCCC
Q 004396 266 I---DLILILSNPAT 277 (756)
Q Consensus 266 ~---v~~lVLi~p~~ 277 (756)
. +.+.++..++.
T Consensus 99 L~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 99 LNRDLVGAAAGGPPA 113 (290)
T ss_pred cccceeEEeccCCcc
Confidence 3 56666666544
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.95 E-value=6.6e-05 Score=76.47 Aligned_cols=117 Identities=22% Similarity=0.217 Sum_probs=80.0
Q ss_pred CCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhH--hhh--cCCcEEEEec-cCCC------CCC----C---h
Q 004396 160 DGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH--KPL--GKAFEVRCLH-IPVY------DRT----P---F 221 (756)
Q Consensus 160 dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~--~~L--~~gy~Vi~~D-l~G~------G~S----s---~ 221 (756)
+|....+..|.+.|.+ +++|+||++||-.+++..+.... ..| ..+|-|..+| ++++ +.+ + -
T Consensus 43 ~g~~r~y~l~vP~g~~-~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g 121 (312)
T COG3509 43 NGLKRSYRLYVPPGLP-SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRG 121 (312)
T ss_pred CCCccceEEEcCCCCC-CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCC
Confidence 3444455556666663 45689999999999999887765 666 3578898886 2222 222 1 1
Q ss_pred hHHHHHHHHHHHHhhccCC--CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 222 EGLVKFVEETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 222 ~~~a~dv~~~i~~l~~~~~--~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
.+-+..+.++++.+..++. ..+|++.|.|-||.++..+++.+|+.+.++.+++...
T Consensus 122 ~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 122 VDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 1223334444444443333 3489999999999999999999999999988877644
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00013 Score=81.48 Aligned_cols=104 Identities=19% Similarity=0.197 Sum_probs=71.8
Q ss_pred CCCCCEEEEECCCCCchhhHHHhHh-------------------hhcCCcEEEEeccC-CCCCC----------ChhHHH
Q 004396 176 LKGSPTLLFLPGIDGLGLGLILHHK-------------------PLGKAFEVRCLHIP-VYDRT----------PFEGLV 225 (756)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~~~~~~-------------------~L~~gy~Vi~~Dl~-G~G~S----------s~~~~a 225 (756)
.++.|++|.+.|.+|++..+..+.+ .+.+..+++-+|.| |.|.| +.++.+
T Consensus 37 ~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a 116 (415)
T PF00450_consen 37 PEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAA 116 (415)
T ss_dssp GCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHH
T ss_pred CCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccchhhHHH
Confidence 4678999999999998888754321 11246789999965 89988 356778
Q ss_pred HHHHHHHHHhhccCC---CCCEEEEEeChhhHHHHHHHHh----C------CCcceEEEEeCCCCcC
Q 004396 226 KFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAAR----N------PTIDLILILSNPATSF 279 (756)
Q Consensus 226 ~dv~~~i~~l~~~~~---~~~v~LvGhS~GG~vAl~~A~~----~------P~~v~~lVLi~p~~~~ 279 (756)
+++..+|...-...+ .++++|.|.|+||..+-.+|.. . +-.++|+++.++....
T Consensus 117 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 117 EDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 888888877655444 4699999999999988777743 2 3458899999997743
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=97.91 E-value=6.1e-05 Score=74.97 Aligned_cols=91 Identities=27% Similarity=0.302 Sum_probs=69.7
Q ss_pred EECCCC--CchhhHHHhHhhhcCCcEEEEeccCCCCCC-----ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHH
Q 004396 184 FLPGID--GLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (756)
Q Consensus 184 ~lHG~~--~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vA 256 (756)
|+|+.+ ++...|..+...|...+.|+++|.+|++.+ +++++++.....+... .+..+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRA---AGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCCeEEEEECHHHHHH
Confidence 456554 677789999999988899999999999876 4666666555444432 334589999999999999
Q ss_pred HHHHHh---CCCcceEEEEeCCCC
Q 004396 257 LAVAAR---NPTIDLILILSNPAT 277 (756)
Q Consensus 257 l~~A~~---~P~~v~~lVLi~p~~ 277 (756)
..++.+ .++.+.+++++++..
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCC
Confidence 988876 456789999887644
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00026 Score=78.40 Aligned_cols=99 Identities=22% Similarity=0.183 Sum_probs=75.6
Q ss_pred CCCEEEEECCCCCchh---hHHH--h--Hhhh-cCCcEEEEeccCCCCCC---------------ChhHHHHHHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGL---GLIL--H--HKPL-GKAFEVRCLHIPVYDRT---------------PFEGLVKFVEETVRR 234 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~---~~~~--~--~~~L-~~gy~Vi~~Dl~G~G~S---------------s~~~~a~dv~~~i~~ 234 (756)
.-|+++++-|.++.-. .|.. . ...| +.||-|+++|-||.-.- .++|.++-+.-+.++
T Consensus 641 kYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq 720 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQ 720 (867)
T ss_pred CCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHh
Confidence 4789999999876432 2221 1 2344 68999999999997422 588888888888888
Q ss_pred hhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 235 l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
.+.. .-.+|.+-|+|+||++++...+++|+.++..|.-+|.+
T Consensus 721 ~gfi-dmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT 762 (867)
T KOG2281|consen 721 TGFI-DMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT 762 (867)
T ss_pred cCcc-cchheeEeccccccHHHHHHhhcCcceeeEEeccCcce
Confidence 6522 24589999999999999999999999998888766644
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00049 Score=71.77 Aligned_cols=86 Identities=19% Similarity=0.127 Sum_probs=65.7
Q ss_pred CCCEEEEECCCCCchhhHH------HhHhhh--cCCcEEEEeccCCCCCC----ChhHHHHHHHHHHHHhhccC---CCC
Q 004396 178 GSPTLLFLPGIDGLGLGLI------LHHKPL--GKAFEVRCLHIPVYDRT----PFEGLVKFVEETVRREHASS---PEK 242 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~------~~~~~L--~~gy~Vi~~Dl~G~G~S----s~~~~a~dv~~~i~~l~~~~---~~~ 242 (756)
+...||+.-|.++.-+... ..+..+ ..+-+|+.+.+||.|.| +.+++++|-.+.++.+.... ..+
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~ 215 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAK 215 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChh
Confidence 4678999988876655511 122333 34679999999999988 58999999999999887432 246
Q ss_pred CEEEEEeChhhHHHHHHHHhC
Q 004396 243 PIYLVGDSFGGCLALAVAARN 263 (756)
Q Consensus 243 ~v~LvGhS~GG~vAl~~A~~~ 263 (756)
.+++.|||+||.++..++.++
T Consensus 216 ~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 216 NIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred eEEEeeccccHHHHHHHHHhc
Confidence 899999999999999876664
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=97.79 E-value=5.4e-05 Score=76.54 Aligned_cols=84 Identities=17% Similarity=0.176 Sum_probs=50.7
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcC---CcEEEEeccCCC----CCC--ChhHHHHHHHHHHHHhhccCC--CCCEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGK---AFEVRCLHIPVY----DRT--PFEGLVKFVEETVRREHASSP--EKPIYL 246 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~---gy~Vi~~Dl~G~----G~S--s~~~~a~dv~~~i~~l~~~~~--~~~v~L 246 (756)
....|||+||+.++...|..+...+.. .+.--.+...++ +.+ +++..++.+.+-|........ .+++.+
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Isf 82 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISF 82 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceE
Confidence 466899999999999999877666633 222111122221 112 355555554433333322222 258999
Q ss_pred EEeChhhHHHHHHHH
Q 004396 247 VGDSFGGCLALAVAA 261 (756)
Q Consensus 247 vGhS~GG~vAl~~A~ 261 (756)
|||||||.++-.+..
T Consensus 83 IgHSLGGli~r~al~ 97 (217)
T PF05057_consen 83 IGHSLGGLIARYALG 97 (217)
T ss_pred EEecccHHHHHHHHH
Confidence 999999999876554
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00021 Score=69.32 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=77.0
Q ss_pred CCEEEEECCCCCchh---hHHHhHhhh-cCCcEEEEecc----CCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 179 SPTLLFLPGIDGLGL---GLILHHKPL-GKAFEVRCLHI----PVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~---~~~~~~~~L-~~gy~Vi~~Dl----~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
...|||+-|++..-. .-..+...| ..++.++-+.+ -|+|.+++.+-++|+..+++++....-...|+|+|||
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhS 115 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHS 115 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhccCcccceEEEecC
Confidence 457999999876543 334556666 66788888875 5789999999999999999987766545689999999
Q ss_pred hhhHHHHHHHHh--CCCcceEEEEeCCCC
Q 004396 251 FGGCLALAVAAR--NPTIDLILILSNPAT 277 (756)
Q Consensus 251 ~GG~vAl~~A~~--~P~~v~~lVLi~p~~ 277 (756)
.|+.=.+.+..+ .+..+.+.|+.+|..
T Consensus 116 TGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 116 TGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred ccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 999998888833 456677778877755
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0019 Score=71.63 Aligned_cols=112 Identities=14% Similarity=0.039 Sum_probs=66.9
Q ss_pred eeeeccCCCCCCCCCEEEEECCCCCchh-hHHHhHhhh-cCC----cEEEEeccCC-CCCC----C----hhHHHHHHHH
Q 004396 166 WFCPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPL-GKA----FEVRCLHIPV-YDRT----P----FEGLVKFVEE 230 (756)
Q Consensus 166 ~~~~~~~G~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L-~~g----y~Vi~~Dl~G-~G~S----s----~~~~a~dv~~ 230 (756)
..-|.+.+-..+..|+|+++||-..... .....+..| +++ .-++.+|..+ ..++ . ...+++++.-
T Consensus 196 v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP 275 (411)
T PRK10439 196 VWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLP 275 (411)
T ss_pred EEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHH
Confidence 3344443321235799999999542211 112223333 333 3456776531 1122 1 2334566666
Q ss_pred HHHHhh-ccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 231 TVRREH-ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 231 ~i~~l~-~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
+|+..- .....++.+|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 276 ~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 276 QVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 666531 12223578999999999999999999999999999999753
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00027 Score=74.06 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=72.8
Q ss_pred CCCEEEEECCCCCchhh-HHHhH---hhhcCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEE
Q 004396 178 GSPTLLFLPGIDGLGLG-LILHH---KPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIY 245 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~-~~~~~---~~L~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~ 245 (756)
++..+||+||++.+-+. -...+ ........++.+.||..|.- +.+.-..+++.+|+.+..+.+.++|+
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 57799999999776543 22222 33345578889999887743 45555677888888888777788999
Q ss_pred EEEeChhhHHHHHHHHh--------CCCcceEEEEeCCCC
Q 004396 246 LVGDSFGGCLALAVAAR--------NPTIDLILILSNPAT 277 (756)
Q Consensus 246 LvGhS~GG~vAl~~A~~--------~P~~v~~lVLi~p~~ 277 (756)
|++||||..++++...+ .+.+++-+||.+|-.
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 99999999999988754 234566777777644
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00026 Score=70.27 Aligned_cols=99 Identities=12% Similarity=0.001 Sum_probs=76.6
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCc------EEEEeccCCC----C------------------CCChhHHHHHHHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAF------EVRCLHIPVY----D------------------RTPFEGLVKFVEE 230 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy------~Vi~~Dl~G~----G------------------~Ss~~~~a~dv~~ 230 (756)
.-|.||+||.+|+..++..++..|.+.+ =+..+|--|- | +++..++...+..
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 3478999999999999999998885444 2555565552 1 1257778889999
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCC-----CcceEEEEeCCCC
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNP-----TIDLILILSNPAT 277 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P-----~~v~~lVLi~p~~ 277 (756)
++..|+..+.-.++.+|||||||.-...++..+. ..++++|.++...
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 9999988888889999999999999999998754 2477788877644
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00047 Score=75.92 Aligned_cols=163 Identities=17% Similarity=0.212 Sum_probs=107.1
Q ss_pred CCCEEEEECCCC---Cchh---hHHHhHhhhcCCcEEEEeccC-CCCCCChhHHHHHHHHHHH----HhhccCCCCCEEE
Q 004396 178 GSPTLLFLPGID---GLGL---GLILHHKPLGKAFEVRCLHIP-VYDRTPFEGLVKFVEETVR----REHASSPEKPIYL 246 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~---~~~~~~~~L~~gy~Vi~~Dl~-G~G~Ss~~~~a~dv~~~i~----~l~~~~~~~~v~L 246 (756)
..|.++++||.+ .+.+ .|........+--.|-.+|++ +.|.-.+...++-+..+.+ ++...++..+|+|
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~gefpha~IiL 254 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITGEFPHAPIIL 254 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhccCCCCceEE
Confidence 468899999987 1112 233333333555778888875 3444455444444444433 4455677889999
Q ss_pred EEeChhhHHHHHHHHhCC-CcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCC
Q 004396 247 VGDSFGGCLALAVAARNP-TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRL 325 (756)
Q Consensus 247 vGhS~GG~vAl~~A~~~P-~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (756)
+|.|||+.++.+....+. ..|.++|.++=+...... +
T Consensus 255 vGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg------------------------------p------------ 292 (784)
T KOG3253|consen 255 VGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG------------------------------P------------ 292 (784)
T ss_pred EecccCceeeEEeccccCCceEEEEEEecccccCCCc------------------------------c------------
Confidence 999999988888876654 237777776521110000 0
Q ss_pred ChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q 004396 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405 (756)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~ 405 (756)
+.+. .+.+-.++.|+|+|.|.+|..+++.. .+.+.+.
T Consensus 293 ------rgir------------------------------------DE~Lldmk~PVLFV~Gsnd~mcspn~-ME~vreK 329 (784)
T KOG3253|consen 293 ------RGIR------------------------------------DEALLDMKQPVLFVIGSNDHMCSPNS-MEEVREK 329 (784)
T ss_pred ------cCCc------------------------------------chhhHhcCCceEEEecCCcccCCHHH-HHHHHHH
Confidence 0000 04455678999999999999999995 9999887
Q ss_pred CC-CeEEEEEcCCCCcccccc
Q 004396 406 LQ-NCIVRNFKDNGHTLLLEE 425 (756)
Q Consensus 406 l~-~~~l~~i~~aGH~~~~e~ 425 (756)
.. ..+++++.+++|.+-.-.
T Consensus 330 MqA~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 330 MQAEVELHVIGGADHSMAIPK 350 (784)
T ss_pred hhccceEEEecCCCccccCCc
Confidence 65 779999999999875543
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0016 Score=64.54 Aligned_cols=79 Identities=23% Similarity=0.168 Sum_probs=53.9
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcE-EEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFE-VRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~-Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl 257 (756)
..+|||..|+|.+...+.++. +..+++ ++++|++..... . ++ ...+.++|||+|||-.+|.
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l~~d--------~-~~-------~~y~~i~lvAWSmGVw~A~ 72 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDLDFD--------F-DL-------SGYREIYLVAWSMGVWAAN 72 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCcccccc--------c-cc-------ccCceEEEEEEeHHHHHHH
Confidence 568999999999999887764 223343 567788754321 1 11 1245899999999999998
Q ss_pred HHHHhCCCcceEEEEeCCCC
Q 004396 258 AVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 258 ~~A~~~P~~v~~lVLi~p~~ 277 (756)
.+....| +...|.+++..
T Consensus 73 ~~l~~~~--~~~aiAINGT~ 90 (213)
T PF04301_consen 73 RVLQGIP--FKRAIAINGTP 90 (213)
T ss_pred HHhccCC--cceeEEEECCC
Confidence 8766543 56667777644
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00033 Score=74.65 Aligned_cols=97 Identities=15% Similarity=0.028 Sum_probs=57.4
Q ss_pred CCCEEEEECCCCCchhhHHH------------------hHhhh-cCCcEEEEeccCCCCCC-------------------
Q 004396 178 GSPTLLFLPGIDGLGLGLIL------------------HHKPL-GKAFEVRCLHIPVYDRT------------------- 219 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~------------------~~~~L-~~gy~Vi~~Dl~G~G~S------------------- 219 (756)
..|.||++||-++..+.... ....| .+||-|+++|.+|+|+.
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 37899999998876644221 23445 57999999999999854
Q ss_pred -------Ch-hHHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCC
Q 004396 220 -------PF-EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (756)
Q Consensus 220 -------s~-~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p 275 (756)
|+ ...+-|....++.+.... ..++|.++|+||||..++.+|+.. ++|++.|..+-
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 11 111223344555544321 136899999999999999999987 67877776553
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00022 Score=76.94 Aligned_cols=99 Identities=14% Similarity=0.059 Sum_probs=73.0
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcE---EEEeccCCCCCC-ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhh
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFE---VRCLHIPVYDRT-PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~---Vi~~Dl~G~G~S-s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG 253 (756)
.-+++++||++.+...|..+...+ ..++. ++++++++...+ +....++.+...++......+.+++.|+||||||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG 138 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGG 138 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCccccccHHHHHHHHHHHHhhcCCCceEEEeecccc
Confidence 348999999988888888877666 34455 888888865322 3444444444555544444555699999999999
Q ss_pred HHHHHHHHhCC--CcceEEEEeCCCC
Q 004396 254 CLALAVAARNP--TIDLILILSNPAT 277 (756)
Q Consensus 254 ~vAl~~A~~~P--~~v~~lVLi~p~~ 277 (756)
.++..++...+ ..|+.++.++++-
T Consensus 139 ~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 139 LDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred hhhHHHHhhcCccceEEEEEEeccCC
Confidence 99999999888 7899999988754
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00085 Score=71.97 Aligned_cols=115 Identities=22% Similarity=0.175 Sum_probs=76.6
Q ss_pred eeeeeccCCCCCCCCCEEEEECCCCCchhhHH-------HhHhhhcCCcEEEEeccCCCC----CCChhHHHHHHHHHHH
Q 004396 165 RWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLI-------LHHKPLGKAFEVRCLHIPVYD----RTPFEGLVKFVEETVR 233 (756)
Q Consensus 165 ~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~-------~~~~~L~~gy~Vi~~Dl~G~G----~Ss~~~~a~dv~~~i~ 233 (756)
.|+.-.+.....+..|+||++||.|-.-.... .+...|. ...++++|+.-.. ...+..+..++.+..+
T Consensus 108 ~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~ 186 (374)
T PF10340_consen 108 YWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYD 186 (374)
T ss_pred EEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHH
Confidence 56654333211234699999999865443222 2223444 4589999986544 2356666677777777
Q ss_pred HhhccCCCCCEEEEEeChhhHHHHHHHHhCC-----CcceEEEEeCCCCcCC
Q 004396 234 REHASSPEKPIYLVGDSFGGCLALAVAARNP-----TIDLILILSNPATSFG 280 (756)
Q Consensus 234 ~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P-----~~v~~lVLi~p~~~~~ 280 (756)
++....+.++|+|+|-|.||.+++.+..... ..-+++||++|+....
T Consensus 187 ~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 187 YLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 7664456779999999999999998875321 2357899999998654
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00044 Score=71.15 Aligned_cols=94 Identities=17% Similarity=0.191 Sum_probs=64.4
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC-----hhH--HHHHHHH-HHHHhhccCCCCCEEEEEe
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-----FEG--LVKFVEE-TVRREHASSPEKPIYLVGD 249 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss-----~~~--~a~dv~~-~i~~l~~~~~~~~v~LvGh 249 (756)
+...|+|.-|..+--+.= -+...++-+|.|+.+++||++.|+ ..+ -++.+.+ .|..++ ++.+.|+|.|+
T Consensus 242 gq~LvIC~EGNAGFYEvG-~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lg--f~~edIilygW 318 (517)
T KOG1553|consen 242 GQDLVICFEGNAGFYEVG-VMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLG--FRQEDIILYGW 318 (517)
T ss_pred CceEEEEecCCccceEee-eecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcC--CCccceEEEEe
Confidence 456888888865432210 123445679999999999999994 111 1222222 333333 45678999999
Q ss_pred ChhhHHHHHHHHhCCCcceEEEEeCC
Q 004396 250 SFGGCLALAVAARNPTIDLILILSNP 275 (756)
Q Consensus 250 S~GG~vAl~~A~~~P~~v~~lVLi~p 275 (756)
|.||.-++.+|..+|+ |+++||-++
T Consensus 319 SIGGF~~~waAs~YPd-VkavvLDAt 343 (517)
T KOG1553|consen 319 SIGGFPVAWAASNYPD-VKAVVLDAT 343 (517)
T ss_pred ecCCchHHHHhhcCCC-ceEEEeecc
Confidence 9999999999999986 778888654
|
|
| >PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0016 Score=69.34 Aligned_cols=126 Identities=17% Similarity=0.099 Sum_probs=74.2
Q ss_pred cCcEEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCc
Q 004396 484 DGKIVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGA 559 (756)
Q Consensus 484 ~~~~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~ 559 (756)
...+++|.|++- .++|+|++.-|.- .+|....... ..+..+..+..+.--.. +. -.+...-...|.
T Consensus 103 ~~~~~~g~e~l~~a~~~g~gvIl~t~H~G-nwE~~~~~l~---~~~~~~~~i~~~~~n~~-----~~-~~~~~~R~~~g~ 172 (295)
T PF03279_consen 103 KRVEIEGEEHLEAALAEGRGVILLTGHFG-NWELAGRALA---RRGPPVAVIYRPQKNPY-----ID-RLLNKLRERFGI 172 (295)
T ss_pred eEEEEECHHHHHHHHhcCCCCEEeCcCcC-hHHHHHHHHH---hhCCceEEEecCCccHh-----HH-HHHHHHHHhcCC
Confidence 345688988887 4689999999972 2465433222 23444444444331100 00 122223344555
Q ss_pred cccCHH----hHHHHhcCCCeEEEEeCcchhccccCCcce----eEEcCCchhHHHHHHHcCCceeeeeee
Q 004396 560 VPVAAR----NLFKLLSTKSHVLLYPGGAREALHYKGEEY----KLFWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 560 v~v~~~----~~~~~l~~g~~v~ifPeG~re~~~~~~~~~----~l~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
--++++ .+.++|++|+.|++.+-.... .+++.+ ...-..-.|.++||.++|+||||+++.
T Consensus 173 ~~i~~~~~~~~~~~~Lk~g~~v~~l~Dq~~~---~~~~~~v~FfG~~a~~~~g~a~lA~~~~apvvp~~~~ 240 (295)
T PF03279_consen 173 ELIPKGEGIRELIRALKEGGIVGLLGDQDPG---KKDGVFVPFFGRPASTPTGPARLARKTGAPVVPVFAY 240 (295)
T ss_pred eEecchhhHHHHHHHhccCCEEEEEECCCCC---CCCceEEeECCeecccccHHHHHHHHhCCcEEEEEEE
Confidence 444443 467889999999999875321 111111 111233489999999999999999994
|
Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane |
| >PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0031 Score=66.82 Aligned_cols=120 Identities=13% Similarity=0.148 Sum_probs=70.2
Q ss_pred ccCcEEecccCCC--CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH----HH
Q 004396 483 EDGKIVKGLAGVP--NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL----KV 556 (756)
Q Consensus 483 ~~~~~v~g~~~lp--~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~----~~ 556 (756)
....+++|.|++- +++|+|+++-|.. .+|........ .+..+..+.++. +.+.+..++ ..
T Consensus 97 ~~~v~~~g~e~l~~~~gkgvIl~t~H~G-nwE~~~~~l~~---~~~~~~~vyr~~----------~n~~~d~~~~~~R~~ 162 (290)
T PRK06628 97 ERRIEIIGIENIKKLEGQPFLLFSGHFA-NWDISLKILHK---FYPKVAVIYRKA----------NNPYVNKLVNESRAG 162 (290)
T ss_pred cCeEEEeCHHHHHHhcCCcEEEEEecch-HHHHHHHHHHH---hCCCeeEEEecC----------CCHHHHHHHHHHHHh
Confidence 3456778877664 4579999999972 24765433221 222233333322 113333333 34
Q ss_pred cCccccC--H---HhHHHHhcCCCeEEEEeC-----cchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeee
Q 004396 557 MGAVPVA--A---RNLFKLLSTKSHVLLYPG-----GAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 557 ~g~v~v~--~---~~~~~~l~~g~~v~ifPe-----G~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
.|.-.+. + ..+.+.|++|+.|.|.|- |..-.+..++ - ..-+|.++||.++|+||||+++.
T Consensus 163 ~g~~~i~~~~~~~r~l~k~Lk~g~~v~il~Dq~~~~gv~v~FFG~~--a----~t~~~~a~LA~~~~apvv~~~~~ 232 (290)
T PRK06628 163 DKLRLIPKGPEGSRALVRAIKESESIVMLVDQKMNDGIEVPFLGHP--A----MTASAIAKIALQYKYPIIPCQII 232 (290)
T ss_pred cCCceecCCCchHHHHHHHHHcCCeEEEEecccCCCCeeeecCCCc--c----ccchHHHHHHHHHCCCEEEEEEE
Confidence 4544442 2 457778899999999943 2221222111 1 22378899999999999999994
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00069 Score=68.68 Aligned_cols=99 Identities=19% Similarity=0.205 Sum_probs=62.6
Q ss_pred CCC-CEEEEECCCCCchhhHHH-hHhhh--------cCCcEEEEecc-CCCCCCC------hhHHHHHHHH-HHHHhhcc
Q 004396 177 KGS-PTLLFLPGIDGLGLGLIL-HHKPL--------GKAFEVRCLHI-PVYDRTP------FEGLVKFVEE-TVRREHAS 238 (756)
Q Consensus 177 ~~~-p~lV~lHG~~~s~~~~~~-~~~~L--------~~gy~Vi~~Dl-~G~G~Ss------~~~~a~dv~~-~i~~l~~~ 238 (756)
++- |.+||+||.|..+..-.. +...+ ..++-|+++.+ +-+..++ .....+.+.+ +.++.+++
T Consensus 188 kky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID 267 (387)
T COG4099 188 KKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNID 267 (387)
T ss_pred CccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccchhHHHHHHHHHHHHhhccCcc
Confidence 344 999999999887765433 22222 12345555552 2222221 2223333332 22222222
Q ss_pred CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 239 ~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
..+|+++|.|+||.-++.++.++|+.+++.+++++..
T Consensus 268 --~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 268 --RSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred --cceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 4689999999999999999999999999999998733
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00025 Score=73.40 Aligned_cols=102 Identities=21% Similarity=0.195 Sum_probs=65.3
Q ss_pred CCCCCEEEEECCCCCchhhHH--HhHhhh-cC----CcEEEEeccCCCCC-----------------C----Ch-hHHHH
Q 004396 176 LKGSPTLLFLPGIDGLGLGLI--LHHKPL-GK----AFEVRCLHIPVYDR-----------------T----PF-EGLVK 226 (756)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~~--~~~~~L-~~----gy~Vi~~Dl~G~G~-----------------S----s~-~~~a~ 226 (756)
.+.-|+|+++||.......+. ..+..+ .+ ..-+++++..+.+. . .+ +.+.+
T Consensus 21 ~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (251)
T PF00756_consen 21 SKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTE 100 (251)
T ss_dssp TTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHT
T ss_pred CCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhc
Confidence 346789999999732222221 223333 22 24566667655440 0 12 23445
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
++...|+..-...+.+ ..|+|+||||..|+.++.++|+.+.+++.++|...
T Consensus 101 el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred cchhHHHHhcccccce-eEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 6666666543322222 89999999999999999999999999999998653
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00099 Score=74.85 Aligned_cols=109 Identities=17% Similarity=0.116 Sum_probs=82.7
Q ss_pred CCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCHH-----------
Q 004396 497 EGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAAR----------- 565 (756)
Q Consensus 497 ~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~~----------- 565 (756)
..++++|..|-+. ||.+++...+....=.++|..|-- .+..|.++.++++.|++.+-|.
T Consensus 295 gheiVyvpcHRSh-iDylLLsy~ly~ngLvPpHiaAGI---------NLNf~p~G~i~RR~GAfFIRRsfKgn~LYs~Vf 364 (810)
T COG2937 295 GHEIVYVPCHRSH-IDYLLLSYVLYHNGLVPPHIAAGI---------NLNFWPMGPIFRRGGAFFIRRTFKGNPLYSTVF 364 (810)
T ss_pred CCceEEEecchhh-hhHHHHHHHHHhcCCCcchhhccc---------cccCccchHHHHhccceEEEeccCCChhHHHHH
Confidence 4599999999988 799888777664443444444431 2334678899999999999773
Q ss_pred --hHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHc-------CCceeeeeee
Q 004396 566 --NLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARF-------GATIVPFGAV 622 (756)
Q Consensus 566 --~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~-------g~~IVPv~~~ 622 (756)
-..++...|.+|=-|=||+|+..++ +++-|.|...|-+++ .+.+|||+|.
T Consensus 365 rEYl~~Lf~rgysleyfIEGGRSRTGr-------lL~PKtGmlsmtlqA~Lrg~~rpI~lvPvyIg 423 (810)
T COG2937 365 REYLGELFSRGYSLEYFIEGGRSRTGR-------LLPPKTGMLSMTLQAMLRGRTRPILLVPVYIG 423 (810)
T ss_pred HHHHHHHHhCCcceEEEeecCccccCC-------cCCCccchHHHHHHHHhcCCCCCeEEEeeEee
Confidence 3567889999999999999975443 448899999987765 4788999994
|
|
| >PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0032 Score=67.33 Aligned_cols=119 Identities=14% Similarity=0.156 Sum_probs=70.2
Q ss_pred cCcEEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH----H
Q 004396 484 DGKIVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL----K 555 (756)
Q Consensus 484 ~~~~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~----~ 555 (756)
...+++|.|++. +++|+|+++-|.. .+|....... ..+..+..++.+.- .+.+.+++ .
T Consensus 115 ~~~~~~g~e~l~~a~a~gkgvIllt~H~G-nWE~~~~~l~---~~~~~~~~vyr~~~----------n~~~d~~i~~~R~ 180 (308)
T PRK06553 115 GRVEVRGIEIFERLRDDGKPALIFTAHLG-NWELLAIAAA---AFGLDVTVLFRPPN----------NPYAARKVLEARR 180 (308)
T ss_pred CeeEecCHHHHHHHHhcCCCEEEEeeCch-HHHHHHHHHH---HcCCceEEEEecCC----------ChHHHHHHHHHHH
Confidence 456778888776 3579999999972 2477553322 23434444444322 12333333 3
Q ss_pred HcCcccc--CH---HhHHHHhcCCCeEEEEeCcc-----hhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeee
Q 004396 556 VMGAVPV--AA---RNLFKLLSTKSHVLLYPGGA-----REALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 556 ~~g~v~v--~~---~~~~~~l~~g~~v~ifPeG~-----re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
..|..-+ ++ ..+.+.|++|+.|.+.|--. .-.+. |.. -..-+|.++||.++|+||||+++.
T Consensus 181 ~~g~~~i~~~~~~~r~l~r~Lk~g~~v~il~DQ~~~~gv~v~FF--G~~----a~t~~~~a~LA~~~~apVvp~~~~ 251 (308)
T PRK06553 181 TTMGGLVPSGAGAAFALAGVLERGGHVGMLVDQKFTRGVEVTFF--GRP----VKTNPLLAKLARQYDCPVHGARCI 251 (308)
T ss_pred HcCCCcccCCChHHHHHHHHHHcCCeEEEEecccCCCCceeccC--CCc----CCCCchHHHHHHHHCCCEEEEEEE
Confidence 4443333 23 34667889999999995322 11111 111 123478899999999999999994
|
|
| >PLN02349 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00089 Score=70.78 Aligned_cols=122 Identities=15% Similarity=0.148 Sum_probs=73.5
Q ss_pred HHHHhcC-CCeEEEEeCcchhccccCCcceeEEcCCchh----HHHHHHHcCCc--eeeeeeecccchhhhhcCcccccc
Q 004396 567 LFKLLST-KSHVLLYPGGAREALHYKGEEYKLFWPEQQE----FVRMAARFGAT--IVPFGAVGEDDIADLVLDYKDLMS 639 (756)
Q Consensus 567 ~~~~l~~-g~~v~ifPeG~re~~~~~~~~~~l~~~~~~g----f~rlA~~~g~~--IVPv~~~G~~~~~~~~~~~~~~~~ 639 (756)
+..+|++ |..+.|||+|+|.......++...- ||..- |-+|+.++|+| +.|+++. .+|+|+
T Consensus 286 ~~~lL~~Gg~~iwIaPsGgRdR~d~~~g~~~pa-pFD~~svd~mR~l~~~s~~ptHfYPlAl~-----------~yDImP 353 (426)
T PLN02349 286 MALLLREGGQLIWIAPSGGRDRPDPLTGEWTPA-PFDPSAVDNMRRLTEKSKAPGHFYPLAML-----------SYDIMP 353 (426)
T ss_pred HHHHHhcCCeEEEEeCCCCCCCCCccCCCccCC-CCChHHHHHHHHHHHhcCCCccccchHHH-----------hCccCC
Confidence 5567788 7889999999997665533333332 55543 55678888875 6777763 444444
Q ss_pred ccchHHHHHHhhcccccccccccccccccccccCccCCCC---CceEEEEeCCcccCCCCCCcCC-CHHHHHHHHHHHHH
Q 004396 640 IPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKV---PGRFYYLFGKPIQTKGREVSLK-DKENANELYLHIKS 715 (756)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~~p~~---p~~~~~~~G~PI~~~~~~~~~~-~~~~~~~l~~~v~~ 715 (756)
=|-.-+ + ++.=++ -..+-+.||+-|+......... ..+.-+++.+++-+
T Consensus 354 PP~~VE--k-------------------------eIGE~R~v~F~gvGlsvg~EI~~~~~~~~~~~~~e~r~~~t~~~~~ 406 (426)
T PLN02349 354 PPPQVE--K-------------------------EIGERRLVGFTGVGLSVGEEIDFSDITAACEGGAEAREAFTQAAYA 406 (426)
T ss_pred Cccccc--c-------------------------ccCceeeeeeecceeeeccccchHhhhhhcCChHHHHHHHHHHHHH
Confidence 431100 0 111111 2456788999999865432223 34555666677888
Q ss_pred HHHHHHHHHHHH
Q 004396 716 QVERCLDYLLKK 727 (756)
Q Consensus 716 ~v~~~~~~l~~~ 727 (756)
.|.++...|++.
T Consensus 407 ~V~~~Y~~L~~a 418 (426)
T PLN02349 407 SVVEQYAVLKSA 418 (426)
T ss_pred HHHHHHHHHHHh
Confidence 888887777643
|
|
| >COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0078 Score=63.55 Aligned_cols=122 Identities=20% Similarity=0.126 Sum_probs=72.8
Q ss_pred CcEEecccCCCC----CCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHH----HHH
Q 004396 485 GKIVKGLAGVPN----EGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDW----LKV 556 (756)
Q Consensus 485 ~~~v~g~~~lp~----~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~----~~~ 556 (756)
..+++|+|++.+ .+|+|+++-|..- +|+......- ++..+-+++++.-- |.+.+. =..
T Consensus 106 ~~~v~g~e~l~e~l~~~~gvIl~~~H~gn-~E~~~~~l~~---~~~~~~~~yrp~~n----------p~ld~~i~~~R~r 171 (308)
T COG1560 106 RVEVEGLEHLEEALANGRGVILVTPHFGN-WELGGRALAQ---QGPKVTAMYRPPKN----------PLLDWLITRGRER 171 (308)
T ss_pred eeeecCHHHHHHHHHcCCCEEEEecCcch-HHHHHHHHHH---hCCCeeEEecCCCC----------HHHHHHHHHHHHh
Confidence 478999999973 5799999999732 5776654442 23222233322111 233323 344
Q ss_pred cCccccCH-----HhHHHHhcCCCeEEEEeCcchhccccCCcceeEEc---CCchhHHHHHHHcCCceeeeeee
Q 004396 557 MGAVPVAA-----RNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFW---PEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 557 ~g~v~v~~-----~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~---~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
.|.-.+.+ +.+.+.|++|+.|++-|.=.-.... +.....|= .--+|..+||.++|++|||++++
T Consensus 172 ~~~~~~~~~~~~ir~li~~Lk~G~~v~~lpDqd~~~~~--~vfvpFFg~~a~T~t~~~~LA~~~~a~vip~~~~ 243 (308)
T COG1560 172 FGGRLLPRKGEGIRQLIKALKQGEAVGYLPDQDYGPGE--SVFVPFFGVPAATTTGPAKLARLTGAAVVPVFPV 243 (308)
T ss_pred cCCcccCCCchhHHHHHHHHhcCCeEEEecCcccCCCC--CeEeccCCCcccccchHHHHHHHhCCCEEEEEEE
Confidence 55433433 3477889999999999964321100 00011110 11279999999999999999995
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0029 Score=71.21 Aligned_cols=100 Identities=21% Similarity=0.214 Sum_probs=67.4
Q ss_pred CCCEEEEECCCCCchhhHH--HhHhhhc--CCcEEEEeccCCCCCC--------------ChhHHHHHHHHHHHHhhccC
Q 004396 178 GSPTLLFLPGIDGLGLGLI--LHHKPLG--KAFEVRCLHIPVYDRT--------------PFEGLVKFVEETVRREHASS 239 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~--~~~~~L~--~gy~Vi~~Dl~G~G~S--------------s~~~~a~dv~~~i~~l~~~~ 239 (756)
++|++|++-|=+.-...+. .+...|+ -+--++++.+|-+|.| +.++-.+|+..+++++..+.
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 3677777755443322221 2334443 2568999999999999 57888899999998887443
Q ss_pred ---CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 240 ---PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 240 ---~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
.+.|++++|-|+||++|+.+-.++|+.+.+.+..+.+.
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 45689999999999999999999999999999877655
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.025 Score=58.10 Aligned_cols=59 Identities=17% Similarity=0.240 Sum_probs=47.8
Q ss_pred cCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC----CeEEEEEcCCCCcccc-cchhhHHHHhhh
Q 004396 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLL-EEGISLLTIIKG 435 (756)
Q Consensus 376 ~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~-e~p~~~~~~I~~ 435 (756)
....+|-|+++++.|.+++.+. .++..+... +++.+.++++.|..|+ ++|++..+.+.+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~-ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~ 238 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRD-VEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDE 238 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHH-HHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHh
Confidence 4556899999999999999995 777766553 4788889999999987 578888888763
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0032 Score=58.74 Aligned_cols=85 Identities=21% Similarity=0.230 Sum_probs=61.6
Q ss_pred EEEECCCCCchhhHHHhH--hhhcCCc---EEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHH
Q 004396 182 LLFLPGIDGLGLGLILHH--KPLGKAF---EVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (756)
Q Consensus 182 lV~lHG~~~s~~~~~~~~--~~L~~gy---~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vA 256 (756)
||++||+.++..+..... +.+.... ...++.+| .+....++.++.+|...+.. ...|+|.|+||+.|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l~----h~p~~a~~ele~~i~~~~~~----~p~ivGssLGGY~A 73 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHLP----HDPQQALKELEKAVQELGDE----SPLIVGSSLGGYYA 73 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCCC----CCHHHHHHHHHHHHHHcCCC----CceEEeecchHHHH
Confidence 899999999988876533 4444433 33333333 35788889999999885544 57999999999999
Q ss_pred HHHHHhCCCcceEEEEeCCCC
Q 004396 257 LAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 257 l~~A~~~P~~v~~lVLi~p~~ 277 (756)
..++.++. + +.|++||+.
T Consensus 74 t~l~~~~G--i-rav~~NPav 91 (191)
T COG3150 74 TWLGFLCG--I-RAVVFNPAV 91 (191)
T ss_pred HHHHHHhC--C-hhhhcCCCc
Confidence 99999874 2 356678765
|
|
| >PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0083 Score=63.63 Aligned_cols=120 Identities=18% Similarity=0.167 Sum_probs=69.3
Q ss_pred cCcEEecccCCCC--CCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH----HHc
Q 004396 484 DGKIVKGLAGVPN--EGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL----KVM 557 (756)
Q Consensus 484 ~~~~v~g~~~lp~--~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~----~~~ 557 (756)
...+++|.+++.. ++|+|++.-|.. .+|.+.....+. .+..+..++++. ..+.+.+++ ...
T Consensus 93 ~~~~~~g~~~~~~~~gkgvI~~t~H~G-nWEl~~~~~~~~--~~~~~~~vyr~~----------~n~~~d~~~~~~R~~~ 159 (293)
T PRK06946 93 KLVQVDSAIDLTDPDGPPTIFLGLHFV-GIEAGSIWLNYS--LRRRVGSLYTPM----------SNPLLDAIAKAARGRF 159 (293)
T ss_pred ceEEEECHHHHHhcCCCCEEEEecchh-HHHHHHHHHHhc--ccCCceEEeeCC----------CCHHHHHHHHHHHHhc
Confidence 4567788877663 579999999972 247765332211 122223333321 113333332 345
Q ss_pred CccccCHH----hHHHHhcCCCeEEEEeCcc-------hhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeee
Q 004396 558 GAVPVAAR----NLFKLLSTKSHVLLYPGGA-------REALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 558 g~v~v~~~----~~~~~l~~g~~v~ifPeG~-------re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
|..-++.. .+.++|++|+.|.+.|-=. .-.+...+ - .--+|.++||.++|+||||+++.
T Consensus 160 g~~~i~~~~~~r~~~~~Lk~g~~v~~l~Dq~~~~~~gv~v~FFG~~--a----~t~~~~a~LA~~~~a~vvp~~~~ 229 (293)
T PRK06946 160 GAEMVSRADSARQVLRWLRDGKPVMLGADMDFGLRDSTFVPFFGVP--A----CTLTAVSRLARTGGAQVVPFITE 229 (293)
T ss_pred CCCccCCCchHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCC--c----HHhHHHHHHHHhcCCeEEEEEEE
Confidence 55445433 4677888999999985332 11111111 0 12378899999999999999984
|
|
| >PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.01 Score=63.44 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=67.9
Q ss_pred cCcEEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH----H
Q 004396 484 DGKIVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL----K 555 (756)
Q Consensus 484 ~~~~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~----~ 555 (756)
+..+++|.|++- +++|+|++.-|.- .+|........ . ..+..+.++ ...+.+..++ .
T Consensus 105 ~~~~~~g~e~l~~a~~~gkgvI~~t~H~G-nWE~~~~~~~~---~-~~~~~vyr~----------~~n~~~d~~~~~~R~ 169 (310)
T PRK05646 105 RLAHIEGLEHLQQAQQEGQGVILMALHFT-TLEIGAALLGQ---Q-HTIDGMYRE----------HKNPVFDFIQRRGRE 169 (310)
T ss_pred CeEEEeCHHHHHHHHhCCCCEEEEecchh-HHHHHHHHHHc---c-CCCeEEeeC----------CCCHHHHHHHHHHhh
Confidence 456788888775 3579999999972 24775432221 1 111122221 1223444433 2
Q ss_pred HcCc--cccCHH---hHHHHhcCCCeEEEEeCcc-------hhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeee
Q 004396 556 VMGA--VPVAAR---NLFKLLSTKSHVLLYPGGA-------REALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 556 ~~g~--v~v~~~---~~~~~l~~g~~v~ifPeG~-------re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
..|. +++++. .+.++|++|+.|++.+-=. .-.+. |.. -..-+|.++||.++|+||||+++.
T Consensus 170 ~~g~~~i~~~~~~~r~ilk~Lk~g~~v~il~Dq~~~~~~gv~v~Ff--G~~----a~t~~g~a~LA~~~~apvvp~~~~ 242 (310)
T PRK05646 170 RHNLDSTAIEREDVRGMLKLLRAGRAIWYAPDQDYGAKQSIFVPLF--GIP----AATVTATTKFARLGRARVIPFTQK 242 (310)
T ss_pred ccCCCcccccHhhHHHHHHHHhCCCeEEEeCCCCCCCCCCEEecCC--CCc----chhhhHHHHHHHhhCCcEEEEEEE
Confidence 3443 434444 4667888999999985321 11111 111 122378899999999999999994
|
|
| >PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.012 Score=62.96 Aligned_cols=122 Identities=13% Similarity=0.101 Sum_probs=68.6
Q ss_pred cCcEEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH----H
Q 004396 484 DGKIVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL----K 555 (756)
Q Consensus 484 ~~~~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~----~ 555 (756)
...+++|.|++- .++++|+++-|. +.+|.+..... ..+..+..+..+.- .+.+..++ .
T Consensus 113 ~~~~~~g~e~l~~a~~~gkgvI~~t~H~-gnwE~~~~~~~---~~~~~~~~vyr~~~----------n~~~d~~~~~~R~ 178 (314)
T PRK08943 113 RRVEWHGLEILEEARANGENVIFLVPHG-WAIDIPAMLLA---SQGQPMAAMFHNQR----------NPLFDWLWNRVRR 178 (314)
T ss_pred CeEEEECHHHHHHHHhCCCCEEEEEech-hHHHHHHHHHH---hcCCCccEEEeCCC----------CHHHHHHHHHHHh
Confidence 456788888775 367999999995 33566443322 12333333333211 12333333 2
Q ss_pred HcCccccCH----HhHHHHhcCCCeEEEEeCcchhccccCCcceeEEc----CCchhHHHHHHHcCCceeeeeee
Q 004396 556 VMGAVPVAA----RNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFW----PEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 556 ~~g~v~v~~----~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~----~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
..|.--++. ..+.++|++|+.|++-+--.-. .+.+.+--|. ..-+|.++||.++|+||||++++
T Consensus 179 ~~g~~~i~~~~~~r~i~kaLk~g~~v~il~Dq~~~---~~~gv~v~FfG~~a~t~~g~a~LA~k~~apvvp~~~~ 250 (314)
T PRK08943 179 RFGGRLHAREDGIKPFISSVRQGYWGYYLPDEDHG---PEHSVFVDFFATYKATLPGIGRLAKVCRARVVPLFPV 250 (314)
T ss_pred hcCCeeecCchhHHHHHHHHhCCCeEEEeCCCCCC---CCCCEEeCCCCCchhHhHHHHHHHHHhCCeEEEEEEE
Confidence 334333322 3467888999999998533210 0011111110 12268899999999999999994
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.034 Score=55.74 Aligned_cols=52 Identities=21% Similarity=0.346 Sum_probs=41.2
Q ss_pred cEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcc-cccchhhHHHHhh
Q 004396 381 EVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTL-LLEEGISLLTIIK 434 (756)
Q Consensus 381 PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~-~~e~p~~~~~~I~ 434 (756)
-+.++.+++|..+|.. ....+.+..|+++++.++ +||.. .+-+.+.+...|.
T Consensus 308 l~ivv~A~~D~Yipr~-gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~ 360 (371)
T KOG1551|consen 308 LIIVVQAKEDAYIPRT-GVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIV 360 (371)
T ss_pred eEEEEEecCCcccccc-CcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHH
Confidence 3678889999999998 599999999999999999 68864 4445555555554
|
|
| >PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0099 Score=63.60 Aligned_cols=122 Identities=19% Similarity=0.157 Sum_probs=68.3
Q ss_pred cCcEEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH----H
Q 004396 484 DGKIVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL----K 555 (756)
Q Consensus 484 ~~~~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~----~ 555 (756)
...+++|.|++- +++|+|++.-|. ..+|.+...... .+ .+..+.++ ...+.+..++ .
T Consensus 108 ~~v~i~g~e~l~~a~~~gkgvI~lt~H~-GnwE~~~~~~~~---~~-~~~~vyr~----------~~n~~~d~~~~~~R~ 172 (309)
T PRK06860 108 RWTEVEGLEHIREVQAQGRGVLLVGVHF-LTLELGARIFGM---HN-PGIGVYRP----------NDNPLYDWLQTWGRL 172 (309)
T ss_pred CeEEEeCHHHHHHHHhCCCCEEEEecch-hHHHHHHHHHHc---cC-CCeEEeeC----------CCCHHHHHHHHHHHh
Confidence 456788888775 357999999996 224775533221 12 22222222 1113333332 2
Q ss_pred HcCccccCHH---hHHHHhcCCCeEEEEeCcchhccccCCcceeEEc----CCchhHHHHHHHcCCceeeeeee
Q 004396 556 VMGAVPVAAR---NLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFW----PEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 556 ~~g~v~v~~~---~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~----~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
..|..-++.. .+.++|++|+.|+|-|--.-. ...+-....+- ..-+|.++||.++|+||||+++.
T Consensus 173 ~~g~~~i~~~~~r~~~k~Lk~g~~v~il~Dq~~~--~~~gv~v~FfG~~~a~t~~g~a~LA~~~~apvvp~~~~ 244 (309)
T PRK06860 173 RSNKSMLDRKDLKGMIKALKKGERIWYAPDHDYG--PRSSVFVPFFAVEQAATTTGTWMLARMSKAAVIPFVPR 244 (309)
T ss_pred hcCCcCcCcccHHHHHHHHhcCCeEEEeCCCCCC--CCCCEEecCCCCCchhhHHHHHHHHHHhCCeEEEEEEE
Confidence 3454444443 467788999999998543210 00010011111 12368899999999999999994
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0074 Score=68.87 Aligned_cols=96 Identities=17% Similarity=0.183 Sum_probs=60.3
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-----------------cCCcEEEEeccCC-----CCCCChhHHHHHHHHHHHHh
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-----------------GKAFEVRCLHIPV-----YDRTPFEGLVKFVEETVRRE 235 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-----------------~~gy~Vi~~Dl~G-----~G~Ss~~~~a~dv~~~i~~l 235 (756)
++-||+|++|..|+..+-+.++..- ...|+.+++|+-+ ||+ ++.+.++-+.+.|+..
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~-~l~dQtEYV~dAIk~I 166 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGH-ILLDQTEYVNDAIKYI 166 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccH-hHHHHHHHHHHHHHHH
Confidence 4557999999999987766544222 1357788888643 233 4666666666665543
Q ss_pred hccC------C---CCCEEEEEeChhhHHHHHHHHhCCC----cceEEEEeCC
Q 004396 236 HASS------P---EKPIYLVGDSFGGCLALAVAARNPT----IDLILILSNP 275 (756)
Q Consensus 236 ~~~~------~---~~~v~LvGhS~GG~vAl~~A~~~P~----~v~~lVLi~p 275 (756)
...+ + .+.|+||||||||.+|...+. +|+ .|+-++-.+.
T Consensus 167 LslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t-lkn~~~~sVntIITlss 218 (973)
T KOG3724|consen 167 LSLYRGEREYASPLPHSVILVGHSMGGIVARATLT-LKNEVQGSVNTIITLSS 218 (973)
T ss_pred HHHhhcccccCCCCCceEEEEeccchhHHHHHHHh-hhhhccchhhhhhhhcC
Confidence 2211 1 345999999999999986654 443 4444444443
|
|
| >PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.016 Score=61.95 Aligned_cols=121 Identities=18% Similarity=0.165 Sum_probs=67.2
Q ss_pred cCcEEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHH---
Q 004396 484 DGKIVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKV--- 556 (756)
Q Consensus 484 ~~~~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~--- 556 (756)
...+++|.|++. +++|+|++.-|.- .+|.+...... . ..+..+.++ ...+.+..++..
T Consensus 108 ~~v~v~g~e~l~~a~~~gkgvI~~t~H~G-nWE~~~~~~~~---~-~~~~~vyr~----------~~n~~~d~~i~~~R~ 172 (306)
T PRK08733 108 PGVQIEGLEHLQQLQQQGRGVLLVSGHFM-TLEMCGRLLCD---H-VPLAGMYRR----------HRNPVFEWAVKRGRL 172 (306)
T ss_pred CcEEEeCHHHHHHHHhCCCCEEEEecCch-HHHHHHHHHHc---c-CCceEEEeC----------CCCHHHHHHHHHHHh
Confidence 456788888775 3579999999962 24775433221 1 112222221 112334443322
Q ss_pred -cCccccCH---HhHHHHhcCCCeEEEEeCcchhccccCCcceeEE----cCCchhHHHHHHHcCCceeeeeee
Q 004396 557 -MGAVPVAA---RNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLF----WPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 557 -~g~v~v~~---~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~----~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
.|.--+++ ..+.++|++|+.|++-|-=.-. .+.+..--| -..-+|.++||.++|+||||+++.
T Consensus 173 ~~g~~~i~~~~~r~~~kaLk~g~~v~il~Dq~~~---~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~ 243 (306)
T PRK08733 173 RYATHMFANEDLRATIKHLKRGGFLWYAPDQDMR---GKDTVFVPFFGHPASTITATHQLARLTGCAVVPYFHR 243 (306)
T ss_pred hcCCcCcCcccHHHHHHHHhCCCeEEEeCCCCCC---CCCcEEeCCCCCchhHHHHHHHHHHHhCCeEEEEEEE
Confidence 34322333 4567888999999998532100 001111111 022378899999999999999993
|
|
| >PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.017 Score=61.10 Aligned_cols=122 Identities=14% Similarity=0.019 Sum_probs=64.8
Q ss_pred cCcEEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCc
Q 004396 484 DGKIVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGA 559 (756)
Q Consensus 484 ~~~~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~ 559 (756)
...+++|.|++. +++|+|+++-|- ..+|.+..............+.+.++.+.. .+...-...|.
T Consensus 88 ~~~~~~~~e~l~~~~~~gkgvI~~t~H~-GnWEl~~~~~~~~~~~~~i~r~~~n~~~d~----------~~~~~R~~~g~ 156 (289)
T PRK08706 88 SLVRYRNKHYLDDALAAGEKVIILYPHF-TAFEMAVYALNQDVPLISMYSHQKNKILDE----------QILKGRNRYHN 156 (289)
T ss_pred CceEEECHHHHHHHHhCCCCEEEEecch-hHHHHHHHHHHccCCCcEEeeCCCCHHHHH----------HHHHHHhccCC
Confidence 346788888775 367999999996 224765533221111112233333333221 12222223443
Q ss_pred ccc--CH---HhHHHHh-cCCCeEEEEeC-------cchhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeee
Q 004396 560 VPV--AA---RNLFKLL-STKSHVLLYPG-------GAREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 560 v~v--~~---~~~~~~l-~~g~~v~ifPe-------G~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
..+ .+ ..+.++| ++|..|++.+- |..-.+.+++ -..-+|.+++|.++|+||||+++.
T Consensus 157 ~~i~~~~~~~r~i~k~L~k~~~~v~~l~Dq~~~~~~gv~v~FfG~~------a~t~~g~a~LA~~~~apvvp~~~~ 226 (289)
T PRK08706 157 VFLIGRTEGLRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIQ------TATITGLSRIAALANAKVIPAIPV 226 (289)
T ss_pred cccccChhhHHHHHHHHHhCCceEEEeCCCCCCCCCCEEeccCCcc------chhhhHHHHHHHhcCCeEEEEEEE
Confidence 222 23 3466778 57766676631 2111111111 122378899999999999999994
|
|
| >TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.014 Score=62.39 Aligned_cols=119 Identities=13% Similarity=0.050 Sum_probs=67.1
Q ss_pred cCcEEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH----H
Q 004396 484 DGKIVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL----K 555 (756)
Q Consensus 484 ~~~~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~----~ 555 (756)
...+++|.|++. +++|+|+++-|. +.+|........ .+..+..++.+. ..+.+..++ .
T Consensus 104 ~~~~i~g~e~l~~~~~~gkgvi~~t~H~-gnwE~~~~~~~~---~~~~~~~v~r~~----------~n~~~d~~~~~~R~ 169 (305)
T TIGR02208 104 RRVNLMGLEHIEAAQAAGKPVIFLVPHG-WAIDYAGLRLAS---QGLPMVTMFNNH----------KNPLFDWLWNRVRS 169 (305)
T ss_pred CceEEeCHHHHHHHHhCCCCEEEEecch-hHHHHHHHHHHh---cCCCceEEeeCC----------CCHHHHHHHHHHHh
Confidence 346788888775 367999999995 445655433221 222222222211 112333332 2
Q ss_pred HcCccccCH----HhHHHHhcCCCeEEEEeCc-------chhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeee
Q 004396 556 VMGAVPVAA----RNLFKLLSTKSHVLLYPGG-------AREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 556 ~~g~v~v~~----~~~~~~l~~g~~v~ifPeG-------~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
..|.--++. ..+.++|++|+.|+|-+-= ..-.+.++. - .--+|.++||.++|+||||+++.
T Consensus 170 ~~g~~~i~~~~~~r~i~~aLk~g~~v~il~Dq~~~~~~gv~v~FfG~~--a----~t~~~~a~LA~~~~apvv~~~~~ 241 (305)
T TIGR02208 170 RFGGHVYAREAGIKALLASLKRGESGYYLPDEDHGPEQSVFVPFFATY--K----ATLPVVGRLAKAGNAQVVPVFPG 241 (305)
T ss_pred cCCCceecChhhHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeccCCCc--c----hhHHHHHHHHHhcCCeEEEEEEE
Confidence 344333322 3467788999999998432 211111110 0 11267899999999999999994
|
This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars. |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0044 Score=68.45 Aligned_cols=82 Identities=11% Similarity=0.064 Sum_probs=60.9
Q ss_pred hHHHhHhhh-cCCcE------EEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCC-
Q 004396 194 GLILHHKPL-GKAFE------VRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT- 265 (756)
Q Consensus 194 ~~~~~~~~L-~~gy~------Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~- 265 (756)
.|..+++.| +.||. ..-+|+|---. ..+++...+...|+...... +++|+||||||||.++..+....+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~ 143 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQE 143 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccch
Confidence 788899888 33333 23368775433 34567777777777766555 7899999999999999999988742
Q ss_pred -----cceEEEEeCCCC
Q 004396 266 -----IDLILILSNPAT 277 (756)
Q Consensus 266 -----~v~~lVLi~p~~ 277 (756)
.|+++|.++++.
T Consensus 144 ~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 144 EWKDKYIKRFISIGTPF 160 (389)
T ss_pred hhHHhhhhEEEEeCCCC
Confidence 599999998865
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.011 Score=61.54 Aligned_cols=96 Identities=10% Similarity=0.071 Sum_probs=65.1
Q ss_pred CCEEEEECCCC--CchhhHHHhHhhhc--CCcEEEEeccCCCCC-C----ChhHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 004396 179 SPTLLFLPGID--GLGLGLILHHKPLG--KAFEVRCLHIPVYDR-T----PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (756)
Q Consensus 179 ~p~lV~lHG~~--~s~~~~~~~~~~L~--~gy~Vi~~Dl~G~G~-S----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGh 249 (756)
..|||+.||++ ++...+..+.+.+. .++.+.++. .|-|. + ++.++++.+.+.+...... ..-+.+||+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~s~~~~~~~Qv~~vce~l~~~~~L--~~G~naIGf 102 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQDSLFMPLRQQASIACEKIKQMKEL--SEGYNIVAE 102 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcccccccCHHHHHHHHHHHHhcchhh--cCceEEEEE
Confidence 45688999998 55557777766664 255455554 34444 2 3455555555555542211 236999999
Q ss_pred ChhhHHHHHHHHhCCC--cceEEEEeCCCC
Q 004396 250 SFGGCLALAVAARNPT--IDLILILSNPAT 277 (756)
Q Consensus 250 S~GG~vAl~~A~~~P~--~v~~lVLi~p~~ 277 (756)
|.||.++-.++.+.|+ .|..+|-+++.-
T Consensus 103 SQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 103 SQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred cchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 9999999999999987 488898877644
|
|
| >TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.016 Score=61.79 Aligned_cols=121 Identities=19% Similarity=0.170 Sum_probs=67.9
Q ss_pred cCcEEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH----H
Q 004396 484 DGKIVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL----K 555 (756)
Q Consensus 484 ~~~~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~----~ 555 (756)
...+++|.|++- +++++|++.-|. ..+|.+...... . ..+..+..+ .+.+.+..++ .
T Consensus 102 ~~v~i~g~e~l~~a~~~gkgvI~lt~H~-GnwE~~~~~~~~---~-~~~~~vyr~----------~~n~~~d~l~~~~R~ 166 (303)
T TIGR02207 102 KWMQIEGLEHLQRAQKQGRGVLLVGVHF-LTLELGARIFGQ---Q-QPGIGVYRP----------HNNPLFDWIQTRGRL 166 (303)
T ss_pred CcEEEECHHHHHHHHhcCCCEEEEecch-hHHHHHHHHHHc---c-CCCeEEEeC----------CCCHHHHHHHHHHHH
Confidence 456788888775 357999999996 224775433221 1 111222221 1123333333 2
Q ss_pred HcCccccCHH---hHHHHhcCCCeEEEEeCcchhccccCCcceeEE-----cCCchhHHHHHHHcCCceeeeeee
Q 004396 556 VMGAVPVAAR---NLFKLLSTKSHVLLYPGGAREALHYKGEEYKLF-----WPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 556 ~~g~v~v~~~---~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~-----~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
..|.--+++. .+.++|++|+.|+|-+--.-. .+.+.+--| -..-.|.+++|.++|+||||+++.
T Consensus 167 ~~g~~~i~~~~~r~i~~~Lk~g~~v~il~Dq~~~---~~~g~~v~FfG~~~a~~~~g~a~LA~~~~apvip~~~~ 238 (303)
T TIGR02207 167 RSNKAMIDRKDLRGMIKALKNGERIWYAPDHDYG---RKSSVFVPFFAVPDAATTTGTSILARLSKCAVVPFTPR 238 (303)
T ss_pred hcCCcccCcccHHHHHHHHhCCCeEEEeCCCCCC---CCCcEEeCCCCCCcchhHHHHHHHHHHhCCeEEEEEEE
Confidence 3343333333 477788999999998642210 001111111 122368899999999999999994
|
This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis. |
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.016 Score=65.20 Aligned_cols=124 Identities=14% Similarity=-0.001 Sum_probs=79.1
Q ss_pred hcccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchh-----hHHHhHh---hh-cCCcEEEEeccCCCCCCC--h
Q 004396 153 AKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-----GLILHHK---PL-GKAFEVRCLHIPVYDRTP--F 221 (756)
Q Consensus 153 ~~~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~-----~~~~~~~---~L-~~gy~Vi~~Dl~G~G~Ss--~ 221 (756)
...+...||..+.--.|.+.+. ...|+++..+-++-... .-....+ .+ ++||.|+..|.||.|.|. +
T Consensus 21 ~v~V~MRDGvrL~~dIy~Pa~~--g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~ 98 (563)
T COG2936 21 DVMVPMRDGVRLAADIYRPAGA--GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVF 98 (563)
T ss_pred eeeEEecCCeEEEEEEEccCCC--CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccc
Confidence 3455677887754444555433 23788888882221111 1112233 34 789999999999999992 1
Q ss_pred ----hHHHHHHHHHHHHhhc-cCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 222 ----EGLVKFVEETVRREHA-SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 222 ----~~~a~dv~~~i~~l~~-~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
.+=++|-.++|+-+.. ...+.+|..+|-|++|...+.+|+..|...+.++...+...
T Consensus 99 ~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 99 DPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 1122233333333222 22366999999999999999999999998888888776553
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.03 Score=63.40 Aligned_cols=129 Identities=22% Similarity=0.247 Sum_probs=80.2
Q ss_pred HHHHHhhcccccCCCCC-ceeeeeccCCCCCCCCCEEEEECCCCCchh--hHHHhH-hhhcCCcEEEEeccCCCCCC---
Q 004396 147 KDYLDAAKEIIKPDGGP-PRWFCPVDCGRPLKGSPTLLFLPGIDGLGL--GLILHH-KPLGKAFEVRCLHIPVYDRT--- 219 (756)
Q Consensus 147 ~~y~~~~~~~~~~dg~~-~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~--~~~~~~-~~L~~gy~Vi~~Dl~G~G~S--- 219 (756)
.+|..+.--....||.. |-.+.|...-.....+|++|+.-|.=+... .|.... ..|.+|+---..+.||-|.-
T Consensus 415 ~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~ 494 (682)
T COG1770 415 EDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRA 494 (682)
T ss_pred hHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChH
Confidence 45554433333355543 233333322111224788887776533332 233222 33367766656667887643
Q ss_pred ------------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 220 ------------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 220 ------------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
++.|+.+....++++-... .+.++++|-|.||+++..+|...|+.+.++|+--|..
T Consensus 495 WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~--~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFV 562 (682)
T COG1770 495 WYEDGKLLNKKNTFTDFIAAARHLVKEGYTS--PDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFV 562 (682)
T ss_pred HHHhhhhhhccccHHHHHHHHHHHHHcCcCC--ccceEEeccCchhHHHHHHHhhChhhhhheeecCCcc
Confidence 6888888777777652222 3489999999999999999999999999999977644
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0042 Score=71.20 Aligned_cols=98 Identities=12% Similarity=0.092 Sum_probs=59.4
Q ss_pred CCCCEEEEECCCCC---chhh--HHHhHhhhcCCcEEEEeccC----CCCCC---------ChhHH---HHHHHHHHHHh
Q 004396 177 KGSPTLLFLPGIDG---LGLG--LILHHKPLGKAFEVRCLHIP----VYDRT---------PFEGL---VKFVEETVRRE 235 (756)
Q Consensus 177 ~~~p~lV~lHG~~~---s~~~--~~~~~~~L~~gy~Vi~~Dl~----G~G~S---------s~~~~---a~dv~~~i~~l 235 (756)
++.|+||++||.+. +... ...++.... ++-|+.+++| |+..+ .+.|+ .+.+.+.++..
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCCChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 35799999999532 2222 122222211 4899999998 32222 12222 23344444443
Q ss_pred hccCCCCCEEEEEeChhhHHHHHHHHh--CCCcceEEEEeCCCC
Q 004396 236 HASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (756)
Q Consensus 236 ~~~~~~~~v~LvGhS~GG~vAl~~A~~--~P~~v~~lVLi~p~~ 277 (756)
+.+ ..+|+|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 172 ggd--~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 172 GGD--PDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred CCC--cceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 322 3589999999999999887765 235688888887644
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.03 Score=62.51 Aligned_cols=108 Identities=13% Similarity=0.041 Sum_probs=60.9
Q ss_pred CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH----HHcCcccc-CH---HhH
Q 004396 496 NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL----KVMGAVPV-AA---RNL 567 (756)
Q Consensus 496 ~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~----~~~g~v~v-~~---~~~ 567 (756)
+++|+|++.-|.. .+|....... .+..+..++.+ ...+.+.+++ ...|.--+ .+ ..+
T Consensus 138 ~gkGvIllt~H~G-NWEl~~~~l~----~~~p~~~vyRp----------~kNp~ld~li~~~R~r~G~~lI~~~~giR~l 202 (454)
T PRK05906 138 EQEGAILFCGHQA-NWELPFLYIT----KRYPGLAFAKP----------IKNRRLNKKIFSLRESFKGKIVPPKNGINQA 202 (454)
T ss_pred CCCCEEEEeehhh-HHHHHHHHHH----cCCCeEEEEec----------CCCHHHHHHHHHHHHhcCCeeecCchHHHHH
Confidence 4679999999972 2476433222 12233333332 1223333333 34555444 22 346
Q ss_pred HHHhcCCCeEEEEeCcchhccccCCcceeEE----cCCchhHHHHHHHcCCceeeeeee
Q 004396 568 FKLLSTKSHVLLYPGGAREALHYKGEEYKLF----WPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 568 ~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~----~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
.+.|++|+.|.|-|--.-. .++.+--| =.--+|.++||.++|+||||+++.
T Consensus 203 iraLk~G~~vgiL~DQ~~~----~~Gv~VpFFG~~a~T~tgpA~LA~rtgApVVpv~~~ 257 (454)
T PRK05906 203 LRALHQGEVVGIVGDQALL----SSSYSYPLFGSQAFTTTSPALLAYKTGKPVIAVAIY 257 (454)
T ss_pred HHHHhcCCEEEEEeCCCCC----CCceEeCCCCCccchhhHHHHHHHHhCCeEEEEEEE
Confidence 6788999999999644310 01111001 012378999999999999999994
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.009 Score=66.92 Aligned_cols=127 Identities=20% Similarity=0.269 Sum_probs=80.0
Q ss_pred HHHHhhcccccCCCCC-ceeeeeccCCCCCC-CCCEEEEECCCCCchh--hHHHhHhhh-cCCcEEEEeccCCCCCC---
Q 004396 148 DYLDAAKEIIKPDGGP-PRWFCPVDCGRPLK-GSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRT--- 219 (756)
Q Consensus 148 ~y~~~~~~~~~~dg~~-~~~~~~~~~G~~~~-~~p~lV~lHG~~~s~~--~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--- 219 (756)
+|-.+.......||.. |-++-+. ...... ..|.+|..+|.-+-.. .|..--..| ..|+-....|.||-|.-
T Consensus 438 ~y~~~r~~~~SkDGt~VPM~Iv~k-k~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~ 516 (712)
T KOG2237|consen 438 DYVVERIEVSSKDGTKVPMFIVYK-KDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQ 516 (712)
T ss_pred ceEEEEEEEecCCCCccceEEEEe-chhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccc
Confidence 4555556677888876 3344443 222222 3676666665422221 233222223 55666666678998743
Q ss_pred ------------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 220 ------------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 220 ------------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
+++|+..-+..+++.--. ...+..+.|.|.||.++.+++..+|+.+.++|+--|..
T Consensus 517 WHk~G~lakKqN~f~Dfia~AeyLve~gyt--~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 517 WHKDGRLAKKQNSFDDFIACAEYLVENGYT--QPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred hhhccchhhhcccHHHHHHHHHHHHHcCCC--CccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 466666666666654211 23589999999999999999999999999998866544
|
|
| >KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.015 Score=63.28 Aligned_cols=109 Identities=17% Similarity=0.238 Sum_probs=75.4
Q ss_pred CCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccCHH-----------
Q 004396 497 EGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAAR----------- 565 (756)
Q Consensus 497 ~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~~----------- 565 (756)
.-|.||+.=|.+- +|-+++ ..++...++..-.+|.-. .+..|++.++++.+|+..+.|+
T Consensus 157 g~PliFlPlHRSH-lDYlli-TwIL~~~~Ik~P~iAsGN--------NLnIP~Fg~Llr~LGaFFIrRriDp~~~G~KDV 226 (715)
T KOG3729|consen 157 GIPMVFLPLHRSH-LDYLLI-TWILWHFGIKLPHIASGN--------NLNIPGFGWLLRALGAFFIRRRVDPDDEGGKDV 226 (715)
T ss_pred CCceEEEecchhh-hhHHHH-HHHHHhcCcCCceeccCC--------ccccchHHHHHHhcchheeeeccCCCcccchhH
Confidence 3489999999965 576544 444556665544444422 3445788999999999988763
Q ss_pred --------hHHHHhcCCCeEEEEeCcchhccccCCcceeEEcCCchhHHHH---HHHc----CCceeeeeee
Q 004396 566 --------NLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRM---AARF----GATIVPFGAV 622 (756)
Q Consensus 566 --------~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rl---A~~~----g~~IVPv~~~ 622 (756)
-...+|++|..|=+|=||+|+..+. .. --|.|..-. |..+ ++-+|||.+.
T Consensus 227 LYRA~LH~yi~~~L~Q~~~iEfFlEGtRsR~GK---~~----~pk~GlLSVvV~a~~~g~IPD~LlvPVs~~ 291 (715)
T KOG3729|consen 227 LYRAILHSYIEQVLSQDMPIEFFLEGTRSRFGK---AL----TPKNGLLSVVVEAVQHGFIPDCLLVPVSYT 291 (715)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEeccccccCC---cC----CcccccHHHHHHHHhcCCCCceEEEeeecc
Confidence 2567899999999999999975542 11 235665544 4444 4679999984
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.029 Score=59.88 Aligned_cols=98 Identities=18% Similarity=0.196 Sum_probs=70.1
Q ss_pred CCEEEEECCCCCchh---hHHHhHhhh-cCCcEEEEeccCCC--CC-------------------CC-------------
Q 004396 179 SPTLLFLPGIDGLGL---GLILHHKPL-GKAFEVRCLHIPVY--DR-------------------TP------------- 220 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~---~~~~~~~~L-~~gy~Vi~~Dl~G~--G~-------------------Ss------------- 220 (756)
.-.||++||.+.+.+ ....+-..| ..|+.++++.+|.- .. ++
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 347999999988764 455666778 67999999998871 10 00
Q ss_pred ------hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCC-cceEEEEeCCCC
Q 004396 221 ------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-IDLILILSNPAT 277 (756)
Q Consensus 221 ------~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~-~v~~lVLi~p~~ 277 (756)
.+.+...+.+.+..+... +..+++||||+.|+..++.+.+..+. .++++|++++..
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~-~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQ-GGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 123344455555554433 45569999999999999999998874 589999999843
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0076 Score=57.19 Aligned_cols=56 Identities=21% Similarity=0.232 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCC----cceEEEEeCCCC
Q 004396 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT----IDLILILSNPAT 277 (756)
Q Consensus 222 ~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~----~v~~lVLi~p~~ 277 (756)
..+.+.+...++.....++..+++++|||+||.+|..++..... ....++..+++.
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 44556666666665544677799999999999999999887654 455666666533
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0069 Score=64.90 Aligned_cols=81 Identities=19% Similarity=0.167 Sum_probs=56.6
Q ss_pred CCCCCEEEEecCCCchhhHHHHHHHHHHhcCc--eeccccccccccccccccCCCccHHHHHHHcCccccCHHh------
Q 004396 495 PNEGPVLLVGYHMLLGFELYSLVEEFLREKNI--MVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAARN------ 566 (756)
Q Consensus 495 p~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~--~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~~~------ 566 (756)
+.+.++|+++||+.. +|-+.+. .+...+|. ..+.+.+..+=.. |++++.+...|-+.++|+-
T Consensus 68 ~~~e~alli~NH~~~-~Dwl~~w-~~~~~~G~l~~~~~~lK~~lk~~--------Pi~Gw~~~~~~fiFl~R~~~~d~~~ 137 (346)
T KOG1505|consen 68 YGKERALLIANHQSE-VDWLYLW-TYAQRKGVLGNVKIVLKKSLKYL--------PIFGWGMWFHGFIFLERNWEKDEKT 137 (346)
T ss_pred cCCCceEEEeccccc-cchhhHH-HHHhcCCchhhhhHHHhhHHHhC--------cchheeeeecceEEEecchhhhHHH
Confidence 556799999999966 4776655 33444553 5666666666443 4677789999999998842
Q ss_pred ---HHHHhcC---CCeEEEEeCcch
Q 004396 567 ---LFKLLST---KSHVLLYPGGAR 585 (756)
Q Consensus 567 ---~~~~l~~---g~~v~ifPeG~r 585 (756)
..+.+++ -.-++|||||||
T Consensus 138 l~~~~k~l~~~~~~~wLlLFPEGT~ 162 (346)
T KOG1505|consen 138 LISLLKHLKDSPDPYWLLLFPEGTR 162 (346)
T ss_pred HHHHHHHhccCCCceEEEEecCCCc
Confidence 3333333 478999999995
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.039 Score=56.99 Aligned_cols=96 Identities=16% Similarity=0.054 Sum_probs=53.8
Q ss_pred CCEEEEECCCCCch---hhHHHh---HhhhcCCcEEEEeccCCCCCC---------ChhHHHHHHHHHHHHhhccCCCCC
Q 004396 179 SPTLLFLPGIDGLG---LGLILH---HKPLGKAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEKP 243 (756)
Q Consensus 179 ~p~lV~lHG~~~s~---~~~~~~---~~~L~~gy~Vi~~Dl~G~G~S---------s~~~~a~dv~~~i~~l~~~~~~~~ 243 (756)
..|||+.||+|.+. ..+..+ ++..-.|--|.++++ |.+.+ .+.+.++.+.+.+.....- ..-
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L--~~G 81 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPEL--ANG 81 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGG--TT-
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhh--hcc
Confidence 45789999998753 244443 444445667888877 33321 2455566666666653221 236
Q ss_pred EEEEEeChhhHHHHHHHHhCCC-cceEEEEeCCCC
Q 004396 244 IYLVGDSFGGCLALAVAARNPT-IDLILILSNPAT 277 (756)
Q Consensus 244 v~LvGhS~GG~vAl~~A~~~P~-~v~~lVLi~p~~ 277 (756)
+++||+|.||.++-.++.+.|+ .|..+|-+++.-
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 9999999999999999999874 688899887644
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.009 Score=52.59 Aligned_cols=55 Identities=18% Similarity=0.280 Sum_probs=48.0
Q ss_pred CCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 379 ~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
..|+|++.++.|+.+|.+. ++.+.+.+++++++.+++.||..+.....-+.+++.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~-a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~ 88 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEG-ARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVD 88 (103)
T ss_pred CCCEEEEecCcCCCCcHHH-HHHHHHHCCCceEEEEeccCcceecCCChHHHHHHH
Confidence 5899999999999999995 999999999999999999999998744455555555
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.034 Score=54.00 Aligned_cols=100 Identities=17% Similarity=0.235 Sum_probs=67.0
Q ss_pred CCCEEEEECCCCCchhhHHH--hHhhh--cCCcEEEEecc--CCCC-----CC-------------C----------hhH
Q 004396 178 GSPTLLFLPGIDGLGLGLIL--HHKPL--GKAFEVRCLHI--PVYD-----RT-------------P----------FEG 223 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~--~~~~L--~~gy~Vi~~Dl--~G~G-----~S-------------s----------~~~ 223 (756)
.-|+|.++.|+.++.+.|.. -.+.. ..++.|+.+|- ||.. .| + .+-
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred cCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHH
Confidence 46899999999999887643 12222 45788999995 4442 22 1 223
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 224 ~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
.++.+.+++..-.......++.+.||||||.=|+..+.++|.+.+++-..+|-.
T Consensus 123 v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~ 176 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPIC 176 (283)
T ss_pred HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccccc
Confidence 345555555532222233579999999999999999999998887777666544
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.011 Score=62.13 Aligned_cols=53 Identities=19% Similarity=0.292 Sum_probs=41.4
Q ss_pred ccCCC-CcEEEEEeCCCCCCCCHHHHHHHHHhCCC--eEEEEEcCCCCcccccchhh
Q 004396 375 LHAVK-AEVLVLASGKDNMLPSEDEAKRLNNSLQN--CIVRNFKDNGHTLLLEEGIS 428 (756)
Q Consensus 375 l~~i~-~PvLvI~G~~D~~vp~~~~~~~l~~~l~~--~~l~~i~~aGH~~~~e~p~~ 428 (756)
+.++. +|+|+++|.+|..+|... +..+.+...+ .+...+++++|......+..
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~-~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~ 282 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRD-AEDLYEAARERPKKLLFVPGGGHIDLYDNPPA 282 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhh-hHHHHhhhccCCceEEEecCCccccccCccHH
Confidence 34444 799999999999999995 7777777665 57888899999888754443
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.037 Score=55.92 Aligned_cols=94 Identities=20% Similarity=0.139 Sum_probs=66.5
Q ss_pred CEEEEECCCCCchhh--HHHhHhhhc--CCcEEEEeccCCCC--CC---ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 180 PTLLFLPGIDGLGLG--LILHHKPLG--KAFEVRCLHIPVYD--RT---PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 180 p~lV~lHG~~~s~~~--~~~~~~~L~--~gy~Vi~~Dl~G~G--~S---s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
-++|++||++.+... +..+.+.+. .|..|+++|. |.| .| .+.++++.+.+.+...... .+-++++|.|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~l~pl~~Qv~~~ce~v~~m~~l--sqGynivg~S 100 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSSLMPLWEQVDVACEKVKQMPEL--SQGYNIVGYS 100 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhhhccHHHHHHHHHHHHhcchhc--cCceEEEEEc
Confidence 468889999887765 666666663 4678889886 444 55 4566666666666643322 3469999999
Q ss_pred hhhHHHHHHHHhCCC-cceEEEEeCCC
Q 004396 251 FGGCLALAVAARNPT-IDLILILSNPA 276 (756)
Q Consensus 251 ~GG~vAl~~A~~~P~-~v~~lVLi~p~ 276 (756)
.||.++-.++...++ .|..+|-++++
T Consensus 101 QGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 101 QGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred cccHHHHHHHHhCCCCCcceeEeccCC
Confidence 999999999987653 46666665543
|
|
| >PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.05 Score=58.09 Aligned_cols=122 Identities=17% Similarity=0.122 Sum_probs=68.2
Q ss_pred cCcEEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH----H
Q 004396 484 DGKIVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL----K 555 (756)
Q Consensus 484 ~~~~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~----~ 555 (756)
...+++|.|++- +++|+|+++-|.. .+|.+...... . ..+..+..+ ...+.+..++ .
T Consensus 106 ~~v~~~g~e~l~~a~~~gkgvI~lt~H~G-nwE~~~~~l~~---~-~~~~~vyr~----------~~n~~~d~~~~~~R~ 170 (305)
T PRK08025 106 KWFDVEGLDNLKRAQMQNRGVMVVGVHFM-SLELGGRVMGL---C-QPMMATYRP----------HNNKLMEWVQTRGRM 170 (305)
T ss_pred CeEEEECHHHHHHHHhCCCCEEEEecchh-HHHHHHHHHHc---c-CCCeEEEeC----------CCCHHHHHHHHHHHh
Confidence 456788888775 3579999999962 25775543321 1 122222221 1223444433 2
Q ss_pred HcCccccCH---HhHHHHhcCCCeEEEEeCcchhccccCCcceeEEc----CCchhHHHHHHHcCCceeeeeee
Q 004396 556 VMGAVPVAA---RNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLFW----PEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 556 ~~g~v~v~~---~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~~----~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
..|.-.+++ ..+.++|++|+.|+|-|-=.-. ...+-....+- ..-+|.+++|.++|+||||+++.
T Consensus 171 ~~g~~~i~~~~~r~~~~aLk~g~~v~il~DQ~~~--~~~gv~v~FfG~~~a~t~~g~~~LA~~~~apvvp~~~~ 242 (305)
T PRK08025 171 RSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYG--PKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMV 242 (305)
T ss_pred ccCCcCcCcccHHHHHHHHhCCCeEEEeCCCCCC--CCCCeEeCCCCCcchhHHHHHHHHHHhhCCeEEEEEEE
Confidence 334333443 3477888999999999432100 00010011111 12368899999999999999994
|
|
| >PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.038 Score=58.98 Aligned_cols=119 Identities=18% Similarity=0.156 Sum_probs=67.5
Q ss_pred cEEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHH----Hc
Q 004396 486 KIVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLK----VM 557 (756)
Q Consensus 486 ~~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~----~~ 557 (756)
.+++|.|++- +++|+|+++-|.. .+|........ . ..+..+.++ ...+.+..++. ..
T Consensus 97 ~~~~g~e~l~~~~~~gkgvI~lt~H~G-nwE~~~~~~~~---~-~~~~~vyr~----------~~n~~~d~~~~~~R~~~ 161 (305)
T PRK08734 97 RQRHGQELYDAALASGRGVIVAAPHFG-NWELLNQWLSE---R-GPIAIVYRP----------PESEAVDGFLQLVRGGD 161 (305)
T ss_pred EEecCHHHHHHHHHcCCCEEEEccccc-hHHHHHHHHHc---c-CCceEEEeC----------CCCHHHHHHHHHHhccC
Confidence 4577888775 3579999999972 24775533321 1 122222222 11234444433 34
Q ss_pred Ccccc--CH---HhHHHHhcCCCeEEEEeCcchhccccCCcceeEE----cCCchhHHHHHHHcCCceeeeeee
Q 004396 558 GAVPV--AA---RNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLF----WPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 558 g~v~v--~~---~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~----~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
|...+ .+ ..+.++|++|+.|++-+-=.-. .+.+..--| -..-+|.++||.++|+||||+++.
T Consensus 162 g~~~i~~~~~~~r~li~~Lk~g~~v~~l~Dq~~~---~~~gv~v~FfG~~a~t~~g~a~LA~~~~apVvp~~~~ 232 (305)
T PRK08734 162 NVRQVRAEGPAVRQLFKVLKDGGAVGILPDQQPK---MGDGVFAPFFGIPALTMTLVNRLAERTGATVLYGWCE 232 (305)
T ss_pred CCeeecCCchhHHHHHHHHhcCCeEEEeCCCCCC---CCCCeEeccCCCccchhhHHHHHHHHhCCeEEEEEEE
Confidence 44444 22 4577888999999988532200 001111111 123478999999999999999994
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.042 Score=53.29 Aligned_cols=97 Identities=20% Similarity=0.315 Sum_probs=62.9
Q ss_pred CCEEEEECCCCCchh-hHHH------------hH----hhhcCCcEEEEeccCC---CC----------CCChhHHHHHH
Q 004396 179 SPTLLFLPGIDGLGL-GLIL------------HH----KPLGKAFEVRCLHIPV---YD----------RTPFEGLVKFV 228 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~-~~~~------------~~----~~L~~gy~Vi~~Dl~G---~G----------~Ss~~~~a~dv 228 (756)
..++|++||-|-... +|++ ++ ++.+.||.|++.+--- +- +|+.+...--.
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 458999999876543 5654 11 2335789999886421 11 12233222222
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCC--CcceEEEEeCCCCcC
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP--TIDLILILSNPATSF 279 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P--~~v~~lVLi~p~~~~ 279 (756)
..++.. .....+++++||+||...+.+..++| +.|.++.|.+.+..+
T Consensus 181 ~~~v~p----a~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 181 KNIVLP----AKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHhcc----cCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 233322 33458999999999999999999998 578888888876533
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.058 Score=52.22 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=68.0
Q ss_pred CCCCCCCCCEEEEECCCCCchhhHHH--------hHh-------hhcCCcEEEEeccCCCCCC-----------ChhHHH
Q 004396 172 CGRPLKGSPTLLFLPGIDGLGLGLIL--------HHK-------PLGKAFEVRCLHIPVYDRT-----------PFEGLV 225 (756)
Q Consensus 172 ~G~~~~~~p~lV~lHG~~~s~~~~~~--------~~~-------~L~~gy~Vi~~Dl~G~G~S-----------s~~~~a 225 (756)
.|++..-..+.++++|.+.+...+.. +.+ ....+-.|-++-+.||..- --++-+
T Consensus 12 ~GD~d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga 91 (177)
T PF06259_consen 12 VGDPDTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGA 91 (177)
T ss_pred ECCcCCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHH
Confidence 35544446689999999776543211 111 1112224444444333211 145556
Q ss_pred HHHHHHHHHhhccC-CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 226 KFVEETVRREHASS-PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 226 ~dv~~~i~~l~~~~-~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
.++..+++.+.... +...+.++|||+|+.++-.++...+..+..+|++.++.
T Consensus 92 ~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 92 PRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 77888888777665 66789999999999999988877677888888887654
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.039 Score=58.43 Aligned_cols=118 Identities=15% Similarity=0.151 Sum_probs=64.0
Q ss_pred EEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH----HHcC
Q 004396 487 IVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL----KVMG 558 (756)
Q Consensus 487 ~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~----~~~g 558 (756)
+++|.|++. .++++|++.-|.- .+|.+...... . ..+..++.+. ..+.+..++ ...|
T Consensus 86 ~~~g~e~l~~a~~~gkgvIllt~H~G-nwE~~~~~~~~---~-~~~~~v~r~~----------~n~~~~~~~~~~R~~~g 150 (289)
T PRK08905 86 DDHGWEHVEAALAEGRGILFLTPHLG-CFEVTARYIAQ---R-FPLTAMFRPP----------RKAALRPLMEAGRARGN 150 (289)
T ss_pred eecCHHHHHHHHhcCCCEEEEecccc-hHHHHHHHHHh---c-CCceEEEECC----------CCHHHHHHHHHHhcccC
Confidence 456666554 3679999999972 24775433221 1 2233333321 112333322 2334
Q ss_pred c--cccCH---HhHHHHhcCCCeEEEEeCcchhccccCCcceeEE----cCCchhHHHHHHHcCCceeeeeee
Q 004396 559 A--VPVAA---RNLFKLLSTKSHVLLYPGGAREALHYKGEEYKLF----WPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 559 ~--v~v~~---~~~~~~l~~g~~v~ifPeG~re~~~~~~~~~~l~----~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
. ++.++ ..+.++|++|+.|.+-+--.-. . +.+..--| -..-.|-++||.++|+||||+++.
T Consensus 151 ~~~i~~~~~~~~~i~~aLk~g~~v~il~Dq~~~--~-~~g~~v~FfG~~a~~~~gpa~lA~~~~apvvp~~~~ 220 (289)
T PRK08905 151 MRTAPATPQGVRMLVKALRRGEAVGILPDQVPS--G-GEGVWAPFFGRPAYTMTLVARLAEVTGVPVIFVAGE 220 (289)
T ss_pred CceeccCCccHHHHHHHHhcCCeEEEcCCCCCC--C-CCceEecCCCCcchHHHHHHHHHHhhCCcEEEEEEE
Confidence 3 32222 3577888999999998432100 0 00111011 123478899999999999999994
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.069 Score=55.72 Aligned_cols=96 Identities=18% Similarity=0.098 Sum_probs=64.1
Q ss_pred CCEEEEECCCCCchh--hHHHhHhhhc--CCcEEEEeccCCCCC-C----ChhHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 004396 179 SPTLLFLPGIDGLGL--GLILHHKPLG--KAFEVRCLHIPVYDR-T----PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~--~~~~~~~~L~--~gy~Vi~~Dl~G~G~-S----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGh 249 (756)
..|+|+.||+|.+.. ....+.+.+. .|..+.++.. |-+. + ++.++++.+.+.+...... ..-+++||+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~~~~s~~~~~~~Qve~vce~l~~~~~l--~~G~naIGf 101 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNGVGDSWLMPLTQQAEIACEKVKQMKEL--SQGYNIVGR 101 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCCccccceeCHHHHHHHHHHHHhhchhh--hCcEEEEEE
Confidence 456888999987665 3444444442 2455556654 3322 2 4666666666666653222 235999999
Q ss_pred ChhhHHHHHHHHhCCC--cceEEEEeCCCC
Q 004396 250 SFGGCLALAVAARNPT--IDLILILSNPAT 277 (756)
Q Consensus 250 S~GG~vAl~~A~~~P~--~v~~lVLi~p~~ 277 (756)
|.||.++-.++.+.|+ .|..+|-+++.-
T Consensus 102 SQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 102 SQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred ccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 9999999999999987 599999877654
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.34 Score=58.04 Aligned_cols=89 Identities=30% Similarity=0.501 Sum_probs=63.6
Q ss_pred CCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCC--------CChhHHHHHHHHHHHHhhccCCCCCEEEEE
Q 004396 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDR--------TPFEGLVKFVEETVRREHASSPEKPIYLVG 248 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~--------Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvG 248 (756)
+..|+++|+|.+.+....+..++..|. .|.||. .++++.+.- +|++++.-.|..|..|+|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle---------~PaYglQ~T~~vP~dSies~A~~---yirqirkvQP~GPYrl~G 2188 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE---------IPAYGLQCTEAVPLDSIESLAAY---YIRQIRKVQPEGPYRLAG 2188 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC---------CcchhhhccccCCcchHHHHHHH---HHHHHHhcCCCCCeeeec
Confidence 357899999999998888888777763 233331 245555544 455555556667999999
Q ss_pred eChhhHHHHHHHHhCC--CcceEEEEeCCCC
Q 004396 249 DSFGGCLALAVAARNP--TIDLILILSNPAT 277 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P--~~v~~lVLi~p~~ 277 (756)
+|+|++++..+|.... +....+|+++.+.
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 9999999999986543 3455699998865
|
|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.2 Score=59.40 Aligned_cols=102 Identities=11% Similarity=0.038 Sum_probs=59.7
Q ss_pred CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHcCccccC---------HHh
Q 004396 496 NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVA---------ARN 566 (756)
Q Consensus 496 ~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~---------~~~ 566 (756)
.++|+||+.-|.. .|+....... ..+..+..+..+.- .+ -...|.-.++ -..
T Consensus 477 ~~kgvi~~t~H~g-nwE~~~~~~~---~~~~~~~~i~r~~~------------~~---R~~~g~~~i~~~~~~~~~~~r~ 537 (656)
T PRK15174 477 DQRGCIIVSAHLG-AMYAGPMILS---LLEMNSKWVASTPG------------VL---KGGYGERLISVSDKSEADVVRA 537 (656)
T ss_pred cCCCEEEEecCcc-hhhHHHHHHH---HcCCCceeeecchH------------HH---HHhcCCceeccCCCCcchHHHH
Confidence 4679999999962 1466554333 12333333333211 12 2444444341 235
Q ss_pred HHHHhcCCCeEEEEeCcc------hhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeee
Q 004396 567 LFKLLSTKSHVLLYPGGA------REALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 567 ~~~~l~~g~~v~ifPeG~------re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
+.+.|++|+.|+|-|--. .-.+..++ -..-+|.++||.++|+||||+++.
T Consensus 538 i~~aLk~g~~v~il~Dq~~~~~~~~v~FfG~~------a~~~~g~~~lA~~~~~pvv~~~~~ 593 (656)
T PRK15174 538 CMQTLHSGQSLVVAIDGALNLSAPTIDFFGQQ------ITYSTFCSRLAWKMHLPTVFSVPI 593 (656)
T ss_pred HHHHHHcCCeEEEEeCCCCCCCCceeccCCCc------cCcCcHHHHHHHHHCCCEEEeEEE
Confidence 778899999999993322 11111111 133478999999999999999993
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.068 Score=57.82 Aligned_cols=34 Identities=29% Similarity=0.278 Sum_probs=29.5
Q ss_pred CCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCC
Q 004396 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (756)
Q Consensus 242 ~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p 275 (756)
-|++++|+|.||.+|..+|.-.|..+++++=-++
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~ 217 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSS 217 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCc
Confidence 4899999999999999999999999987775444
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.08 Score=59.33 Aligned_cols=115 Identities=19% Similarity=0.228 Sum_probs=76.7
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchh----hHHHhH-hhhcCCcEEEEeccCCCCCC------------
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL----GLILHH-KPLGKAFEVRCLHIPVYDRT------------ 219 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~----~~~~~~-~~L~~gy~Vi~~Dl~G~G~S------------ 219 (756)
.+.||+.+-+|... .|-+.+..|++|+- +|+-.- .|.... ..|.+|..-+.-.+||-|.-
T Consensus 400 tSkDGT~IPYFiv~-K~~~~d~~pTll~a--YGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~n 476 (648)
T COG1505 400 TSKDGTRIPYFIVR-KGAKKDENPTLLYA--YGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKEN 476 (648)
T ss_pred EcCCCccccEEEEe-cCCcCCCCceEEEe--ccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhc
Confidence 56788886565554 44222357777654 443322 243333 34488888888889998854
Q ss_pred ---ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCC
Q 004396 220 ---PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPA 276 (756)
Q Consensus 220 ---s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~ 276 (756)
.++|++.-.++++++ +.. ..+++.+-|-|-||.+.-.+..++|+.+.++|+--|.
T Consensus 477 rq~vfdDf~AVaedLi~r-git-spe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPl 534 (648)
T COG1505 477 KQNVFDDFIAVAEDLIKR-GIT-SPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPL 534 (648)
T ss_pred chhhhHHHHHHHHHHHHh-CCC-CHHHhhhccCCCCceEEEeeeccChhhhCceeeccch
Confidence 266666666666654 111 1347889999999999999999999999888876653
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.06 Score=57.53 Aligned_cols=94 Identities=18% Similarity=0.159 Sum_probs=70.3
Q ss_pred CEEEEECCCCCchhhHHH-------hHhhhcCCcEEEEeccCCCCCC-----------------ChhHHHHHHHHHHHHh
Q 004396 180 PTLLFLPGIDGLGLGLIL-------HHKPLGKAFEVRCLHIPVYDRT-----------------PFEGLVKFVEETVRRE 235 (756)
Q Consensus 180 p~lV~lHG~~~s~~~~~~-------~~~~L~~gy~Vi~~Dl~G~G~S-----------------s~~~~a~dv~~~i~~l 235 (756)
-+|+|--|..++.+.|.. +++.+ +--++-.++|-+|+| +.++-..|...++..+
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~--~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l 158 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL--KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL 158 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh--CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH
Confidence 358888898888777654 33333 346788889999988 3556667777777777
Q ss_pred hccCC--CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCC
Q 004396 236 HASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (756)
Q Consensus 236 ~~~~~--~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p 275 (756)
+.+.. ..+|+.+|-|+||++|..+=.++|+.+.|....+.
T Consensus 159 K~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 159 KRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASA 200 (492)
T ss_pred hhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccC
Confidence 65532 46899999999999999999999999888766443
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.063 Score=58.03 Aligned_cols=47 Identities=13% Similarity=0.272 Sum_probs=41.3
Q ss_pred cCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC-CeEEEEEcCCCCcccc
Q 004396 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLL 423 (756)
Q Consensus 376 ~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~-~~~l~~i~~aGH~~~~ 423 (756)
.++++|.++|.|..|.+..++. ...+...+| ...++.+||++|....
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~-~~~y~d~L~G~K~lr~vPN~~H~~~~ 306 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDS-SNFYYDKLPGEKYLRYVPNAGHSLIG 306 (367)
T ss_pred HhcCccEEEEecCCCceeccCc-hHHHHhhCCCCeeEEeCCCCCcccch
Confidence 5568999999999999999995 888888888 5678899999999876
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.032 Score=51.79 Aligned_cols=39 Identities=28% Similarity=0.425 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 224 ~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
+.+.+.+.++.+..+++..++++.|||+||.+|..++..
T Consensus 46 ~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 46 LYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 334444444444444666789999999999999988865
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.046 Score=55.71 Aligned_cols=57 Identities=21% Similarity=0.311 Sum_probs=39.3
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC-----CCcceEEEEeCCCC
Q 004396 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-----PTIDLILILSNPAT 277 (756)
Q Consensus 221 ~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~-----P~~v~~lVLi~p~~ 277 (756)
+..+.+++...+..+..+.+..++++.|||+||.+|..+|... +..+..+..-+|..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 107 YKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 5555556666666655557778999999999999999888653 33455555555533
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.18 Score=56.28 Aligned_cols=113 Identities=23% Similarity=0.310 Sum_probs=73.9
Q ss_pred eeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHh----------------hh-------cCCcEEEEecc-CCCCCC--
Q 004396 166 WFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHK----------------PL-------GKAFEVRCLHI-PVYDRT-- 219 (756)
Q Consensus 166 ~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~----------------~L-------~~gy~Vi~~Dl-~G~G~S-- 219 (756)
|+.+.+.....++.|+++.+.|.+|++..+..+.+ .+ .+..+++-+|. .|.|.|
T Consensus 55 f~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~ 134 (437)
T PLN02209 55 FYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYS 134 (437)
T ss_pred EEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCC
Confidence 34444444434568999999999888766533210 11 23567999995 577876
Q ss_pred -------ChhHHHHHHHHHHHHhhccCC---CCCEEEEEeChhhHHHHHHHHh----C------CCcceEEEEeCCCCc
Q 004396 220 -------PFEGLVKFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAAR----N------PTIDLILILSNPATS 278 (756)
Q Consensus 220 -------s~~~~a~dv~~~i~~l~~~~~---~~~v~LvGhS~GG~vAl~~A~~----~------P~~v~~lVLi~p~~~ 278 (756)
+-++.++++..++...-...| .++++|.|.|+||..+-.+|.. + +=.++|+++.++...
T Consensus 135 ~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 135 KTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred CCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 123455677777766544443 4689999999999877777643 1 124679999888663
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.11 Score=55.29 Aligned_cols=102 Identities=17% Similarity=0.106 Sum_probs=62.3
Q ss_pred CCCEEEEECCCCCchhhHHH--hHhhh--cCCcEEEEecc--------------CCCCCC---------------ChhH-
Q 004396 178 GSPTLLFLPGIDGLGLGLIL--HHKPL--GKAFEVRCLHI--------------PVYDRT---------------PFEG- 223 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~--~~~~L--~~gy~Vi~~Dl--------------~G~G~S---------------s~~~- 223 (756)
+-|+++++||..++...+.. -++.. ..+..+++.|- .|-+.| .+++
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 57888999999888533221 12222 23455555432 233322 1233
Q ss_pred HHHHHHHHHHHhhccCCC-CCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcC
Q 004396 224 LVKFVEETVRREHASSPE-KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (756)
Q Consensus 224 ~a~dv~~~i~~l~~~~~~-~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~ 279 (756)
+++++-+.+++....... ....++||||||.=|+.+|+++|+++..+.-.+|....
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 234555444432221111 26789999999999999999999999999988886644
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.12 Score=50.34 Aligned_cols=74 Identities=15% Similarity=0.095 Sum_probs=49.7
Q ss_pred CCcEEEEeccCCCCCC-----ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh--C----CCcceEEEE
Q 004396 204 KAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--N----PTIDLILIL 272 (756)
Q Consensus 204 ~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~--~----P~~v~~lVL 272 (756)
....+..+++|-.... +..+=++++...|+.....-|+.+++|+|+|.|+.++..++.. . .++|.++++
T Consensus 38 ~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 38 TSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp CEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred CeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 4577777888765433 3444456666666666666788899999999999999999877 2 257888888
Q ss_pred eCCCC
Q 004396 273 SNPAT 277 (756)
Q Consensus 273 i~p~~ 277 (756)
+.-+.
T Consensus 118 fGdP~ 122 (179)
T PF01083_consen 118 FGDPR 122 (179)
T ss_dssp ES-TT
T ss_pred ecCCc
Confidence 76544
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.068 Score=60.34 Aligned_cols=84 Identities=10% Similarity=-0.024 Sum_probs=55.7
Q ss_pred hHHHhHhhh-cCCcE-----EEEeccCCCCCC--ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCC-
Q 004396 194 GLILHHKPL-GKAFE-----VRCLHIPVYDRT--PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP- 264 (756)
Q Consensus 194 ~~~~~~~~L-~~gy~-----Vi~~Dl~G~G~S--s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P- 264 (756)
.|..+++.| ..||. ...+|+|-.... .-+++-..+...|+.......+++|+|+||||||.+++.+.....
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~ 236 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEA 236 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccc
Confidence 568888888 44554 445555522211 235666677777777655555679999999999999999876321
Q ss_pred --------------CcceEEEEeCCCC
Q 004396 265 --------------TIDLILILSNPAT 277 (756)
Q Consensus 265 --------------~~v~~lVLi~p~~ 277 (756)
..|++.|.++++.
T Consensus 237 ~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 237 PAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred cccccCCcchHHHHHHHHHheeccccc
Confidence 2466777777644
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=94.15 E-value=2.2 Score=43.32 Aligned_cols=96 Identities=18% Similarity=0.193 Sum_probs=58.9
Q ss_pred CCEEEEECCC--CCch-hhHHHhHhhh-cCCcEEEEeccC-CCCCCC-hhHHHHHHHHHHHHhhccC----CCCCEEEEE
Q 004396 179 SPTLLFLPGI--DGLG-LGLILHHKPL-GKAFEVRCLHIP-VYDRTP-FEGLVKFVEETVRREHASS----PEKPIYLVG 248 (756)
Q Consensus 179 ~p~lV~lHG~--~~s~-~~~~~~~~~L-~~gy~Vi~~Dl~-G~G~Ss-~~~~a~dv~~~i~~l~~~~----~~~~v~LvG 248 (756)
.-+|-|+-|. |... -.|+.+.+.| .+||.|++.-+. |+..-. -.+..+.....++.+.... ..-|++-+|
T Consensus 17 ~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vG 96 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVG 96 (250)
T ss_pred CEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeee
Confidence 3467777775 3333 3688889999 678999998773 332211 1111222333333333221 124788899
Q ss_pred eChhhHHHHHHHHhCCCcceEEEEeC
Q 004396 249 DSFGGCLALAVAARNPTIDLILILSN 274 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P~~v~~lVLi~ 274 (756)
||+|+-+-+.+...++..-++-|+++
T Consensus 97 HSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 97 HSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred cccchHHHHHHhhhccCcccceEEEe
Confidence 99999999988887765556667765
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.15 Score=51.62 Aligned_cols=83 Identities=17% Similarity=0.103 Sum_probs=50.6
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~ 258 (756)
+..+|-.=|...+...|..-+.- +++.. ...+ +...++++.+....+. ++++.|||.||.+|..
T Consensus 37 ~~~~vaFRGTd~t~~~W~ed~~~-------------~~~~~-~~~q-~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~y 100 (224)
T PF11187_consen 37 GEYVVAFRGTDDTLVDWKEDFNM-------------SFQDE-TPQQ-KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQY 100 (224)
T ss_pred CeEEEEEECCCCchhhHHHHHHh-------------hcCCC-CHHH-HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHH
Confidence 44677778887766667642211 11111 1111 2334444444433443 5999999999999999
Q ss_pred HHHhCC----CcceEEEEeCCCC
Q 004396 259 VAARNP----TIDLILILSNPAT 277 (756)
Q Consensus 259 ~A~~~P----~~v~~lVLi~p~~ 277 (756)
+|...+ ++|.+++..+++.
T Consensus 101 aa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 101 AAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHccHHHhhheeEEEEeeCCC
Confidence 888743 5788888877644
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.041 Score=48.94 Aligned_cols=65 Identities=18% Similarity=0.203 Sum_probs=39.0
Q ss_pred hhhHHHHhcCCCCccHHHHHHhhcccc-cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHh
Q 004396 131 EELEVLWDDGYGTDSVKDYLDAAKEII-KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILH 198 (756)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~ 198 (756)
..+-..|.++|..+..++.+..-..+. .-+|..+.+++....+ +++.+|||+||+++|-..|..+
T Consensus 46 ~~L~~yW~~~fDWr~~E~~lN~~phf~t~I~g~~iHFih~rs~~---~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 46 KELVDYWRNEFDWRKHEARLNSFPHFKTEIDGLDIHFIHVRSKR---PNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp HHHHHHHHHT--HHHHHHHHTTS-EEEEEETTEEEEEEEE--S----TT-EEEEEE--SS--GGGGHHH
T ss_pred HHHHHHHhhcCChHHHHHHHHcCCCeeEEEeeEEEEEEEeeCCC---CCCeEEEEECCCCccHHhHHhh
Confidence 347788999998888777776555554 4467776666665543 3688999999999998877654
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.13 Score=54.90 Aligned_cols=86 Identities=19% Similarity=0.106 Sum_probs=68.4
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCL 255 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~v 255 (756)
...-||+.|=|+..+.=+.+.++| ..|+.|+.+|-.-|=.| +-++.++|+..+++....+.+.+++.|+|+|+|+-+
T Consensus 260 d~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADv 339 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADV 339 (456)
T ss_pred ceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchh
Confidence 456777888887777777788889 67999999995444333 789999999999999887777789999999999988
Q ss_pred HHHHHHhCC
Q 004396 256 ALAVAARNP 264 (756)
Q Consensus 256 Al~~A~~~P 264 (756)
.-..-.+.|
T Consensus 340 lP~~~n~L~ 348 (456)
T COG3946 340 LPFAYNRLP 348 (456)
T ss_pred hHHHHHhCC
Confidence 765555544
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.32 Score=53.57 Aligned_cols=98 Identities=16% Similarity=0.196 Sum_probs=76.2
Q ss_pred CCCEEEEECCCCCchhhH--------HHhHhhhcCCcEEEEeccCCCCCC--------------ChhHHHHHHHHHHHHh
Q 004396 178 GSPTLLFLPGIDGLGLGL--------ILHHKPLGKAFEVRCLHIPVYDRT--------------PFEGLVKFVEETVRRE 235 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~--------~~~~~~L~~gy~Vi~~Dl~G~G~S--------------s~~~~a~dv~~~i~~l 235 (756)
++|..|+|-|=+.-...| ...++.+ +-.|+.+++|=+|.| +.++...|+..+|+++
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkf--gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKF--GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHh--CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 578888888866555444 3333333 567999999999977 4677788999999998
Q ss_pred hccCC---CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 236 HASSP---EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 236 ~~~~~---~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
..+.+ ..|.+..|-|+-|.+++.+=..+|+.+.|.|..+.+.
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 87764 2389999999999999999999999998888765533
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.18 Score=55.73 Aligned_cols=100 Identities=19% Similarity=0.263 Sum_probs=64.2
Q ss_pred CCCCCEEEEECCC---CCchhhHHHhHhhh-cCC-cEEEEeccC----CC------C--CC-----ChhHH---HHHHHH
Q 004396 176 LKGSPTLLFLPGI---DGLGLGLILHHKPL-GKA-FEVRCLHIP----VY------D--RT-----PFEGL---VKFVEE 230 (756)
Q Consensus 176 ~~~~p~lV~lHG~---~~s~~~~~~~~~~L-~~g-y~Vi~~Dl~----G~------G--~S-----s~~~~---a~dv~~ 230 (756)
.++.|++|++||. +|++.....--..| +++ +-|+.+++| |+ + ++ -+.|+ .+.+.+
T Consensus 91 a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 91 AEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRD 170 (491)
T ss_pred CCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHH
Confidence 3468999999996 34444433344566 444 778888865 22 1 11 13333 356777
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCC---CcceEEEEeCCCCc
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPATS 278 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P---~~v~~lVLi~p~~~ 278 (756)
-|++.+.+ .++|.|+|+|.||+.++.+.+- | ..+.++|+.++...
T Consensus 171 NIe~FGGD--p~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 171 NIEAFGGD--PQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHhCCC--ccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 77776655 3589999999999988877653 3 35666777776553
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.33 Score=54.30 Aligned_cols=111 Identities=23% Similarity=0.230 Sum_probs=70.1
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhH---h-------------hh-------cCCcEEEEecc-CCCCCCC--
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH---K-------------PL-------GKAFEVRCLHI-PVYDRTP-- 220 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~---~-------------~L-------~~gy~Vi~~Dl-~G~G~Ss-- 220 (756)
+.+.+.....++.|+|+.+.|.+|++..+..+. + .| .+..+++-+|. .|.|.|.
T Consensus 54 y~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~ 133 (433)
T PLN03016 54 YYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSK 133 (433)
T ss_pred EEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCC
Confidence 333344333456899999999988776432211 1 11 23578999995 5888761
Q ss_pred -------hhHHHHHHHHHHHHhhccC---CCCCEEEEEeChhhHHHHHHHHh----C------CCcceEEEEeCCCC
Q 004396 221 -------FEGLVKFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAAR----N------PTIDLILILSNPAT 277 (756)
Q Consensus 221 -------~~~~a~dv~~~i~~l~~~~---~~~~v~LvGhS~GG~vAl~~A~~----~------P~~v~~lVLi~p~~ 277 (756)
-++.++++..++...-... ...+++|.|.|+||..+-.+|.. + +-.++|+++-+|..
T Consensus 134 ~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 134 TPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 1123355666655543333 34689999999999877777643 1 12577999988865
|
|
| >PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.4 Score=50.92 Aligned_cols=115 Identities=14% Similarity=-0.004 Sum_probs=62.1
Q ss_pred EEecccCCC----CCCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHH----HHcC
Q 004396 487 IVKGLAGVP----NEGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWL----KVMG 558 (756)
Q Consensus 487 ~v~g~~~lp----~~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~----~~~g 558 (756)
+++|.|++- +++++|+++-|.- .+|.+...... .. ....+.++ ...+.+.+++ ...|
T Consensus 97 ~~~g~e~l~~a~~~gkgvI~lt~H~G-nWE~~~~~~~~---~~-~~~~v~r~----------~~n~~~d~~~~~~R~~~g 161 (295)
T PRK05645 97 EVEGLEVLEQALASGKGVVGITSHLG-NWEVLNHFYCS---QC-KPIIFYRP----------PKLKAVDELLRKQRVQLG 161 (295)
T ss_pred EecCHHHHHHHHhcCCCEEEEecchh-hHHHHHHHHHh---cC-CCeEEEeC----------CCCHHHHHHHHHHhCCCC
Confidence 466766654 3578999999972 24765432221 11 11122221 1112333333 2334
Q ss_pred cccc--CH---HhHHHHhcCCCeEEEEeCc-------chhccccCCcceeEEcCCchhHHHHHHHcCCceeeeeee
Q 004396 559 AVPV--AA---RNLFKLLSTKSHVLLYPGG-------AREALHYKGEEYKLFWPEQQEFVRMAARFGATIVPFGAV 622 (756)
Q Consensus 559 ~v~v--~~---~~~~~~l~~g~~v~ifPeG-------~re~~~~~~~~~~l~~~~~~gf~rlA~~~g~~IVPv~~~ 622 (756)
..-+ .. ..+.++|++|+.|+|-+-= ..-.+.++. -..-++.+.+|.++++||||+++.
T Consensus 162 ~~~i~~~~~~~r~l~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~------a~t~~~~~~la~~~~~pvv~~~~~ 231 (295)
T PRK05645 162 NRVAPSTKEGILSVIKEVRKGGQVGIPADPEPAESAGIFVPFLGTQ------ALTSKFVPNMLAGGKAVGVFLHAL 231 (295)
T ss_pred CeEeecCcccHHHHHHHHhcCCeEEEcCCCCCCCCCCeEeCCCCCc------hhhhhHHHHHHHhhCCeEEEEEEE
Confidence 3323 22 3477888999999998422 111111111 011246778999999999999994
|
|
| >KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.31 Score=52.60 Aligned_cols=124 Identities=22% Similarity=0.248 Sum_probs=87.5
Q ss_pred ccCcEE--ecccCCCC---CCCEEEEecCCCchhhHHHHHHHHHHhcCceeccccccccccccccccCCCccHHHHHHHc
Q 004396 483 EDGKIV--KGLAGVPN---EGPVLLVGYHMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVM 557 (756)
Q Consensus 483 ~~~~~v--~g~~~lp~---~gp~l~v~NH~~~~~d~~~l~~~~~~~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~ 557 (756)
++|.-| .++.|+-+ +-|||+...|.++ +|.++ +..++...++.+-++|.-+=|.. | .+++.+++..
T Consensus 130 ~dg~yVNe~~~~~vr~~~~k~pV~~lPSHrsY-~DFll-lS~icy~YDi~iP~IAAGmDF~s-----M--k~mg~~LR~s 200 (685)
T KOG3730|consen 130 CDGFYVNEASMANVRKDMGKCPVLYLPSHRSY-MDFLL-LSYICYYYDIEIPGIAAGMDFHS-----M--KGMGTMLRKS 200 (685)
T ss_pred hcceeECHHHHHHHHHHhccCCEEEeccchhH-HHHHH-HHHHHHhccCCCchhhcccchHh-----h--hHHHHHHHhc
Confidence 344444 45556653 5699999999988 67654 44456667788888887666643 2 3678899999
Q ss_pred CccccCHH-------------hHHHHhcCC-CeEEEEeCcchhccccCCcceeEEcCCchhHHHHHHHc-------CCce
Q 004396 558 GAVPVAAR-------------NLFKLLSTK-SHVLLYPGGAREALHYKGEEYKLFWPEQQEFVRMAARF-------GATI 616 (756)
Q Consensus 558 g~v~v~~~-------------~~~~~l~~g-~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~rlA~~~-------g~~I 616 (756)
||...-|. -++.++..+ ..|=.|-||||+.... -. --|-|...|+.+- ++-|
T Consensus 201 GAFFMRRsFg~d~LYWaVFsEYv~t~v~N~~~~VEFFiEgTRSR~~K------~L-~PK~GlL~mvlePyf~geV~Dv~i 273 (685)
T KOG3730|consen 201 GAFFMRRSFGNDELYWAVFSEYVYTLVANYHIGVEFFIEGTRSRNFK------AL-VPKIGLLSMVLEPYFTGEVPDVMI 273 (685)
T ss_pred ccceeeeccCCceehHHHHHHHHHHHHhcCCCceEEEEeeccccccc------cc-CcchhhHHHHHhhhhcCCcCceEE
Confidence 99988773 355667765 6788999999974331 12 3367888888863 6789
Q ss_pred eeeeee
Q 004396 617 VPFGAV 622 (756)
Q Consensus 617 VPv~~~ 622 (756)
|||.+.
T Consensus 274 VPVSv~ 279 (685)
T KOG3730|consen 274 VPVSVA 279 (685)
T ss_pred EEeeec
Confidence 999984
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.17 Score=51.69 Aligned_cols=53 Identities=17% Similarity=0.203 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 224 ~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
+.+.+.-+|+.-- .....+..++|||+||.+++.....+|+.+...++++|+.
T Consensus 120 L~~~lkP~Ie~~y-~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 120 LTEQLKPFIEARY-RTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHHhhHHHHhccc-ccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 3444555555411 1123468999999999999999999999999999999855
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.17 Score=55.44 Aligned_cols=73 Identities=14% Similarity=0.124 Sum_probs=53.7
Q ss_pred hhHHHhHhhh-cCCcE------EEEeccCC-CCCC-ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC
Q 004396 193 LGLILHHKPL-GKAFE------VRCLHIPV-YDRT-PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN 263 (756)
Q Consensus 193 ~~~~~~~~~L-~~gy~------Vi~~Dl~G-~G~S-s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~ 263 (756)
..|..+++.| .=||. -..+|+|- +-.+ ..+++...+...|+......+++|++||+|||||.+.+.+...+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 4778888888 33444 45677764 2222 35666777777777766667778999999999999999999887
Q ss_pred CC
Q 004396 264 PT 265 (756)
Q Consensus 264 P~ 265 (756)
++
T Consensus 204 ~~ 205 (473)
T KOG2369|consen 204 EA 205 (473)
T ss_pred cc
Confidence 65
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.22 Score=54.46 Aligned_cols=40 Identities=20% Similarity=0.210 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhhccCCCCC--EEEEEeChhhHHHHHHHHh
Q 004396 223 GLVKFVEETVRREHASSPEKP--IYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 223 ~~a~dv~~~i~~l~~~~~~~~--v~LvGhS~GG~vAl~~A~~ 262 (756)
...+++...++.+...++..+ |++.|||+||++|+.+|..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 345556666666555566544 9999999999999998854
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.71 Score=51.47 Aligned_cols=111 Identities=20% Similarity=0.153 Sum_probs=73.4
Q ss_pred eeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-------------------cCCcEEEEeccC-CCCCC--------
Q 004396 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-------------------GKAFEVRCLHIP-VYDRT-------- 219 (756)
Q Consensus 168 ~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-------------------~~gy~Vi~~Dl~-G~G~S-------- 219 (756)
.+.++....+..|+||.|.|.+|.+..- .++.++ .+...++-+|.| |-|.|
T Consensus 62 wf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~ 140 (454)
T KOG1282|consen 62 WFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDY 140 (454)
T ss_pred EEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcC
Confidence 3334433345689999999998776544 222222 134578888976 77766
Q ss_pred --ChhHHHHHHHHHHHHhhccCC---CCCEEEEEeChhhHHHHHHHHh----C-----C-CcceEEEEeCCCCcC
Q 004396 220 --PFEGLVKFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAAR----N-----P-TIDLILILSNPATSF 279 (756)
Q Consensus 220 --s~~~~a~dv~~~i~~l~~~~~---~~~v~LvGhS~GG~vAl~~A~~----~-----P-~~v~~lVLi~p~~~~ 279 (756)
+-+..++|+..++.....+.| .++++|.|.|++|...-++|.. + | -.++|+++-+|....
T Consensus 141 ~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 141 KTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDP 215 (454)
T ss_pred cCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCc
Confidence 234456777666666544444 6899999999999777777743 2 1 257899998887643
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=91.77 E-value=0.39 Score=47.55 Aligned_cols=63 Identities=11% Similarity=0.109 Sum_probs=43.0
Q ss_pred hHhhhcCCcEEEEeccCCCCCC----------------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHH
Q 004396 198 HHKPLGKAFEVRCLHIPVYDRT----------------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAA 261 (756)
Q Consensus 198 ~~~~L~~gy~Vi~~Dl~G~G~S----------------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~ 261 (756)
++..++...+|+++-+|-.... .+.|..+....++++. ..+++++|+|||.|+.+...+..
T Consensus 38 qas~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~---n~GRPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 38 QASAFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANY---NNGRPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred HhhhhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhc---CCCCCEEEEEeChHHHHHHHHHH
Confidence 3445566778888887755322 2444455555555552 34679999999999999999987
Q ss_pred hC
Q 004396 262 RN 263 (756)
Q Consensus 262 ~~ 263 (756)
++
T Consensus 115 e~ 116 (207)
T PF11288_consen 115 EE 116 (207)
T ss_pred HH
Confidence 64
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.32 E-value=0.47 Score=52.36 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=24.5
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHH
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAA 261 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~ 261 (756)
+.+.++.+..++++.++++.|||+||++|+.+|+
T Consensus 264 I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 3333333333466779999999999999998765
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=91.10 E-value=0.29 Score=56.46 Aligned_cols=98 Identities=13% Similarity=0.084 Sum_probs=54.3
Q ss_pred CCCEEEEECCCCC---ch--hhHHHhHhhhcCCcEEEEeccC----CCC---CCC-------hhHH---HHHHHHHHHHh
Q 004396 178 GSPTLLFLPGIDG---LG--LGLILHHKPLGKAFEVRCLHIP----VYD---RTP-------FEGL---VKFVEETVRRE 235 (756)
Q Consensus 178 ~~p~lV~lHG~~~---s~--~~~~~~~~~L~~gy~Vi~~Dl~----G~G---~Ss-------~~~~---a~dv~~~i~~l 235 (756)
+.|++|++||.+. ++ ..+....-...++.-|+.+.+| |+- ... +.|+ .+.|.+-|...
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 4699999999632 22 1222211122567888888875 221 111 2232 24444455554
Q ss_pred hccCCCCCEEEEEeChhhHHHHHHHHhC--CCcceEEEEeCCCC
Q 004396 236 HASSPEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (756)
Q Consensus 236 ~~~~~~~~v~LvGhS~GG~vAl~~A~~~--P~~v~~lVLi~p~~ 277 (756)
+.+ ..+|+|+|||.||..+...+..- ...+.++|+.++..
T Consensus 204 GGD--p~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 204 GGD--PDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp TEE--EEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred ccC--Ccceeeeeecccccccceeeecccccccccccccccccc
Confidence 433 35899999999998887776552 26899999998744
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=91.07 E-value=0.18 Score=39.77 Aligned_cols=48 Identities=17% Similarity=0.092 Sum_probs=25.2
Q ss_pred HHHhhcccccCCCCCceeeeeccCC---CCCCCCCEEEEECCCCCchhhHH
Q 004396 149 YLDAAKEIIKPDGGPPRWFCPVDCG---RPLKGSPTLLFLPGIDGLGLGLI 196 (756)
Q Consensus 149 y~~~~~~~~~~dg~~~~~~~~~~~G---~~~~~~p~lV~lHG~~~s~~~~~ 196 (756)
|-.+...+.+.||-.+...+..... .....+|+|++.||+.+++..|-
T Consensus 10 Y~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 10 YPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp ---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred CCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 3345567788898776555543332 12456899999999999998883
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.81 E-value=0.33 Score=52.99 Aligned_cols=41 Identities=29% Similarity=0.357 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 222 ~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
+++.+.|..+++......+..++++.|||+||++|+.+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 33445555555543222234579999999999999988853
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.80 E-value=0.87 Score=47.33 Aligned_cols=100 Identities=18% Similarity=0.112 Sum_probs=60.2
Q ss_pred CCCCEEEEECCCCCc--hhhHHHhHhhh-c----CCcEEEEeccCC-------CCCC--ChhHHHHHHHHHHHHhhccC-
Q 004396 177 KGSPTLLFLPGIDGL--GLGLILHHKPL-G----KAFEVRCLHIPV-------YDRT--PFEGLVKFVEETVRREHASS- 239 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s--~~~~~~~~~~L-~----~gy~Vi~~Dl~G-------~G~S--s~~~~a~dv~~~i~~l~~~~- 239 (756)
...|++++.||-... ...++ +.+.| . ..--++.+|.-- ++.. .+..+++++.=.++..-...
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~-~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~ 174 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPR-ILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSA 174 (299)
T ss_pred ccccEEEEeccHHHHhcCChHH-HHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccc
Confidence 458999999985322 22222 22333 2 234455555421 0111 24445555555555422111
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
....-+|.|.|+||.+++..+.++|+.+..++..+|..
T Consensus 175 ~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 175 DADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred cCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 12357899999999999999999999999998888755
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.43 E-value=0.95 Score=51.35 Aligned_cols=40 Identities=23% Similarity=0.283 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 223 ~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
.+.+.+...+......+++-+++++|||+||.+|..++..
T Consensus 232 wI~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 232 WIAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 3444444455554455677799999999999999988764
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.34 E-value=0.38 Score=52.62 Aligned_cols=37 Identities=24% Similarity=0.330 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHhhccCCC--CCEEEEEeChhhHHHHHHHHh
Q 004396 222 EGLVKFVEETVRREHASSPE--KPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 222 ~~~a~dv~~~i~~l~~~~~~--~~v~LvGhS~GG~vAl~~A~~ 262 (756)
+++.+++..+++. ++. .++++.|||+||++|+.+|..
T Consensus 208 ~qvl~eV~~L~~~----y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEK----YKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHh----cCcccccEEEeccchHHHHHHHHHHH
Confidence 3445555555554 333 368999999999999988864
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.17 E-value=0.87 Score=50.58 Aligned_cols=102 Identities=19% Similarity=0.111 Sum_probs=69.6
Q ss_pred CCCCCEEEEECCCCCchhhHHHhHh----hh---------------cCCcEEEEecc-CCCCCC---------ChhHHHH
Q 004396 176 LKGSPTLLFLPGIDGLGLGLILHHK----PL---------------GKAFEVRCLHI-PVYDRT---------PFEGLVK 226 (756)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~~~~~~----~L---------------~~gy~Vi~~Dl-~G~G~S---------s~~~~a~ 226 (756)
..+.|.++.+.|.+|++..+-.+.+ .+ -..-+++-+|+ -|.|.| ++....+
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccch
Confidence 3468999999999999988766531 11 12346889994 577766 3555556
Q ss_pred HHHHHHHHhhccCC-----CCCEEEEEeChhhHHHHHHHHhCCC---cceEEEEeCCCC
Q 004396 227 FVEETVRREHASSP-----EKPIYLVGDSFGGCLALAVAARNPT---IDLILILSNPAT 277 (756)
Q Consensus 227 dv~~~i~~l~~~~~-----~~~v~LvGhS~GG~vAl~~A~~~P~---~v~~lVLi~p~~ 277 (756)
|+..+.+......+ .++.+|+|.|+||.-+..+|...-+ ..++++++.+..
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 66555554433221 2489999999999999998866443 467777777655
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.03 E-value=0.45 Score=52.63 Aligned_cols=34 Identities=29% Similarity=0.593 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHH
Q 004396 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAA 261 (756)
Q Consensus 224 ~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~ 261 (756)
+.+.+..+++ .+++.++++.|||+||++|..+|.
T Consensus 270 i~~~Lk~ll~----~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 270 ILRHLKEIFD----QNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHH----HCCCCeEEEEecCHHHHHHHHHHH
Confidence 3344444444 367779999999999999998875
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=90.01 E-value=1.6 Score=45.44 Aligned_cols=112 Identities=19% Similarity=0.224 Sum_probs=74.3
Q ss_pred eeeeeccCCCCCCCCCEEEEECCCCCchh-hHHHhHhhh-------c-------CCcEEEEeccC-CCCCC---------
Q 004396 165 RWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPL-------G-------KAFEVRCLHIP-VYDRT--------- 219 (756)
Q Consensus 165 ~~~~~~~~G~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L-------~-------~gy~Vi~~Dl~-G~G~S--------- 219 (756)
-|+.|..... ....|..+.+.|.++.+. .|-. ++++ + +.-+++-+|.| |.|.|
T Consensus 18 ~wly~~~~~~-ks~~pl~lwlqGgpGaSstG~GN-FeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~ 95 (414)
T KOG1283|consen 18 WWLYYATANV-KSERPLALWLQGGPGASSTGFGN-FEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYT 95 (414)
T ss_pred EEEeeecccc-ccCCCeeEEecCCCCCCCcCccc-hhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCccccc
Confidence 3444444332 235788888988765543 3322 2222 1 34568888875 77766
Q ss_pred -ChhHHHHHHHHHHHHhhccCC---CCCEEEEEeChhhHHHHHHHHhCC---------CcceEEEEeCCCCc
Q 004396 220 -PFEGLVKFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAARNP---------TIDLILILSNPATS 278 (756)
Q Consensus 220 -s~~~~a~dv~~~i~~l~~~~~---~~~v~LvGhS~GG~vAl~~A~~~P---------~~v~~lVLi~p~~~ 278 (756)
+.++.+.|+..+++.+....+ ..|++|+..|+||-+|..++...- ..+.+++|-+++.+
T Consensus 96 ~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 96 TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 578889999999988765544 579999999999999998885421 23557777776654
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=89.90 E-value=0.42 Score=53.41 Aligned_cols=40 Identities=28% Similarity=0.322 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 223 ~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
++.++|..+++.........++++.|||+||++|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3445566666553322223479999999999999988854
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=89.44 E-value=0.37 Score=51.71 Aligned_cols=45 Identities=18% Similarity=0.230 Sum_probs=33.7
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCC-----CcceEEEEeCCCCcCCcCCc
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNP-----TIDLILILSNPATSFGRSQL 284 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P-----~~v~~lVLi~p~~~~~~~~~ 284 (756)
+.+||.|||||+|+-+...+..... ..|+.++|+..+.......|
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W 267 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEW 267 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHH
Confidence 6779999999999999987775533 34888999887665443333
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.41 E-value=0.5 Score=52.73 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=25.2
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
...++.+...+++.++++.|||+||++|..+|..
T Consensus 308 ~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 308 RSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHH
Confidence 3333433344777899999999999999988753
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=88.49 E-value=0.64 Score=50.15 Aligned_cols=36 Identities=28% Similarity=0.346 Sum_probs=24.2
Q ss_pred HHHHHHHHhhccCCC--CCEEEEEeChhhHHHHHHHHh
Q 004396 227 FVEETVRREHASSPE--KPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 227 dv~~~i~~l~~~~~~--~~v~LvGhS~GG~vAl~~A~~ 262 (756)
++.+-++.+...++. .+|++.|||+||++|+.+|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 333333333333443 359999999999999988865
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=88.11 E-value=5.9 Score=37.16 Aligned_cols=77 Identities=14% Similarity=0.001 Sum_probs=51.1
Q ss_pred CEEEEECCCCCchhhHHHhHhhhcCCc-EEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHH
Q 004396 180 PTLLFLPGIDGLGLGLILHHKPLGKAF-EVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (756)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L~~gy-~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~ 258 (756)
..||+.-|++.....+.+++ +.+++ -++++|+...... =|..+ .+.+-||++|||-.+|-.
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~ld------fDfsA----------y~hirlvAwSMGVwvAeR 73 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNLD------FDFSA----------YRHIRLVAWSMGVWVAER 73 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCcc------cchhh----------hhhhhhhhhhHHHHHHHH
Confidence 48999999999988876653 23444 4678888654421 01111 125679999999999988
Q ss_pred HHHhCCCcceEEEEeCCC
Q 004396 259 VAARNPTIDLILILSNPA 276 (756)
Q Consensus 259 ~A~~~P~~v~~lVLi~p~ 276 (756)
+....+ .+..+.+++.
T Consensus 74 ~lqg~~--lksatAiNGT 89 (214)
T COG2830 74 VLQGIR--LKSATAINGT 89 (214)
T ss_pred HHhhcc--ccceeeecCC
Confidence 887653 4556666653
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=86.59 E-value=0.95 Score=49.53 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhhccCCC--CCEEEEEeChhhHHHHHHHHh
Q 004396 225 VKFVEETVRREHASSPE--KPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~--~~v~LvGhS~GG~vAl~~A~~ 262 (756)
.+.|..+++. +++ .+|++.|||+||++|+.+|..
T Consensus 200 l~eV~~L~~~----Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 200 QGELKRLLEL----YKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHH----CCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3444444443 443 369999999999999988854
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=86.57 E-value=41 Score=34.92 Aligned_cols=96 Identities=11% Similarity=0.095 Sum_probs=67.3
Q ss_pred CCEEEEECCCCCc-hhhHHHhHhhhcCCcEEEEeccC-------CCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 179 SPTLLFLPGIDGL-GLGLILHHKPLGKAFEVRCLHIP-------VYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 179 ~p~lV~lHG~~~s-~~~~~~~~~~L~~gy~Vi~~Dl~-------G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
.|.|+++--+.|. ....+...++|-....|+..|+- +-|.-+++|+.+-+.+++..++.+ +++++-+
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-----~hv~aVC 177 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-----AHVMAVC 177 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-----CcEEEEe
Confidence 4556666555444 44566778888777889999974 335558999999999999987654 5667766
Q ss_pred hh-----hHHHHHHHHhCCCcceEEEEeCCCCcC
Q 004396 251 FG-----GCLALAVAARNPTIDLILILSNPATSF 279 (756)
Q Consensus 251 ~G-----G~vAl~~A~~~P~~v~~lVLi~p~~~~ 279 (756)
.- +++++..+...|..-+.+++++++...
T Consensus 178 QP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 178 QPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred cCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 54 445555555677788899998877643
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=86.00 E-value=1 Score=50.44 Aligned_cols=22 Identities=36% Similarity=0.557 Sum_probs=19.2
Q ss_pred CCCEEEEEeChhhHHHHHHHHh
Q 004396 241 EKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 241 ~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
..+|++.|||+||++|+.+|..
T Consensus 311 ~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHH
Confidence 4589999999999999988853
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.78 E-value=0.86 Score=49.19 Aligned_cols=80 Identities=20% Similarity=0.133 Sum_probs=47.2
Q ss_pred CCCCEEEEECCCCC-chhhHHHhHhhhcCCcEEEEeccCCCCCC---C-------hhHHHHHHHHHHHHhhccCCCCCEE
Q 004396 177 KGSPTLLFLPGIDG-LGLGLILHHKPLGKAFEVRCLHIPVYDRT---P-------FEGLVKFVEETVRREHASSPEKPIY 245 (756)
Q Consensus 177 ~~~p~lV~lHG~~~-s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S---s-------~~~~a~dv~~~i~~l~~~~~~~~v~ 245 (756)
++...+|+.||+-+ +...|...+....+.+.=..+..+|+-.. | -..+++++.+.+.... -.++.
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~s----i~kIS 153 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYS----IEKIS 153 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccc----cceee
Confidence 34679999999977 66777777766643322223333443222 2 1223444444433322 24899
Q ss_pred EEEeChhhHHHHHHH
Q 004396 246 LVGDSFGGCLALAVA 260 (756)
Q Consensus 246 LvGhS~GG~vAl~~A 260 (756)
.||||+||.++..+.
T Consensus 154 fvghSLGGLvar~AI 168 (405)
T KOG4372|consen 154 FVGHSLGGLVARYAI 168 (405)
T ss_pred eeeeecCCeeeeEEE
Confidence 999999998876443
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=85.31 E-value=1.2 Score=49.99 Aligned_cols=21 Identities=38% Similarity=0.477 Sum_probs=18.4
Q ss_pred CCEEEEEeChhhHHHHHHHHh
Q 004396 242 KPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 242 ~~v~LvGhS~GG~vAl~~A~~ 262 (756)
.+|++.|||+||++|+..|..
T Consensus 294 ~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 479999999999999988853
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=84.87 E-value=2.5 Score=45.40 Aligned_cols=73 Identities=26% Similarity=0.310 Sum_probs=50.2
Q ss_pred EEEEeccC-CCCCC---------ChhHHHHHHHHHHHHhhccC---CCCCEEEEEeChhhHHHHHHHHh----C------
Q 004396 207 EVRCLHIP-VYDRT---------PFEGLVKFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAAR----N------ 263 (756)
Q Consensus 207 ~Vi~~Dl~-G~G~S---------s~~~~a~dv~~~i~~l~~~~---~~~~v~LvGhS~GG~vAl~~A~~----~------ 263 (756)
.++-+|.| |.|.| +-++.++|+..++...-... ..++++|.|.|+||..+-.+|.. .
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 67889988 77776 11234466666666654333 35799999999999988777754 1
Q ss_pred CCcceEEEEeCCCCcC
Q 004396 264 PTIDLILILSNPATSF 279 (756)
Q Consensus 264 P~~v~~lVLi~p~~~~ 279 (756)
+=.++|+++-++....
T Consensus 83 ~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 83 PINLQGYMLGNPVTYM 98 (319)
T ss_pred ceeeeEEEeCCCCCCc
Confidence 1257799998887643
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=84.78 E-value=1.2 Score=49.76 Aligned_cols=36 Identities=36% Similarity=0.366 Sum_probs=24.0
Q ss_pred HHHHHHHHhhccCCC--CCEEEEEeChhhHHHHHHHHh
Q 004396 227 FVEETVRREHASSPE--KPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 227 dv~~~i~~l~~~~~~--~~v~LvGhS~GG~vAl~~A~~ 262 (756)
++.+-++.+...+++ .+|++.|||+||++|+.+|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 343334433333443 368999999999999988764
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=84.56 E-value=1.3 Score=49.63 Aligned_cols=21 Identities=38% Similarity=0.525 Sum_probs=18.5
Q ss_pred CCEEEEEeChhhHHHHHHHHh
Q 004396 242 KPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 242 ~~v~LvGhS~GG~vAl~~A~~ 262 (756)
.+|++.|||+||++|+.+|..
T Consensus 298 ~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 479999999999999988853
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.01 E-value=3.4 Score=44.66 Aligned_cols=52 Identities=25% Similarity=0.359 Sum_probs=34.6
Q ss_pred EEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 207 EVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 207 ~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
.|-..-+..+....-..+.+++..+++. +++-++++-|||+||++|..+|..
T Consensus 140 ~v~~~f~~~~~~~~~~~~~~~~~~L~~~----~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 140 KVEAYFLDAYTSLWNSGLDAELRRLIEL----YPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred eEEEeccchhccccHHHHHHHHHHHHHh----cCCcEEEEecCChHHHHHHHHHHH
Confidence 3444333333333234566666666665 667799999999999999988854
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 65.3 bits (158), Expect = 6e-11
Identities = 102/622 (16%), Positives = 196/622 (31%), Gaps = 158/622 (25%)
Query: 7 IKGVSVSVKSILWNFQLSLVIAVQPVNSGKILIFIPLLFKTMASVINFPVSPSFVINSQY 66
K V KSIL ++ +I + SG + +F LL K V F V+ Y
Sbjct: 35 CKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEE---VLRINY 91
Query: 67 K---TSFRARAQSVGGGDSTVLSSGSIAVNGDP------VSREKEKNGALIDVGNGTLKP 117
K + + + + N + VSR + L+
Sbjct: 92 KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL---------KLRQ 142
Query: 118 RVEKKKLVKNVISEELEVLWDDGYG-TDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRPL 176
+ + + KNV+ + G G T D + K K D W ++
Sbjct: 143 ALLELRPAKNVL-----IDGVLGSGKTWVALDVCLSYKVQCKMDFK-IFW---LNLKN-- 191
Query: 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREH 236
SP + L +L+ + + R H + ++ +RR
Sbjct: 192 CNSPETVLEM------LQKLLYQ--IDPNWTSRSDHS---SNIKLR--IHSIQAELRRLL 238
Query: 237 ASSPEKPIYLVGD---------SFG-GCLALAVAARNPTI-DLI-------LILSNPATS 278
S P + LV +F C L + R + D + + L + + +
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLSCKIL-LTTRFKQVTDFLSAATTTHISLDHHSMT 297
Query: 279 FGRSQLQPLFP-----ILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIEN-------RLP 326
+++ L + +P E+ P LS ++ + I+ + +N +L
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS-IIAESIRDGLATWDNWKHVNCDKLT 356
Query: 327 PRIK--LEQLS-NNLPALLPRLSVMSD--IIPKDTL--LWKLKLLKSASAYANSRLHAVK 379
I+ L L + RLSV IP L +W
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW-------------------- 396
Query: 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQN--CIVRNFKDNG---HTLLLEEGISLL---- 430
+++ S+ + N L + + K++ ++ LE + L
Sbjct: 397 ----------FDVIKSDVM--VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA 444
Query: 431 ---TIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQVVGLLRVASSSVMLSTLE---- 483
+I+ Y + DS D +PP +Y + + L+ ++
Sbjct: 445 LHRSIVD---HYNIPKTFDS-DDLIPP--YLDQYFYSHIGHHLKNIEHPERMTLFRMVFL 498
Query: 484 -----DGKIVKGLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLREKN----IMVHGIAHP 534
+ KI G +L + L + Y + ++ + + +V+ I
Sbjct: 499 DFRFLEQKIRHDSTAWNASGSIL----NTLQQLKFY---KPYICDNDPKYERLVNAILD- 550
Query: 535 EIFLGRLENSSNEFGMTDWLKV 556
FL ++E + TD L++
Sbjct: 551 --FLPKIEENLICSKYTDLLRI 570
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.3 bits (145), Expect = 2e-09
Identities = 97/623 (15%), Positives = 184/623 (29%), Gaps = 149/623 (23%)
Query: 133 LEVLWDDGYGTD-SVKDYLDAAKEIIK------------PDGGPPRWFCPVDCGRPLKGS 179
L V D + + KD D K I+ G R F K
Sbjct: 22 LSVFEDA-FVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLF---WTLL-SKQE 76
Query: 180 PTL-LFLPGIDGLGLGLI---LHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRRE 235
+ F+ + + + + + + R ++I DR + F + V R
Sbjct: 77 EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTR-MYIEQRDRL-YNDNQVFAKYNVSRL 134
Query: 236 HAS----------SPEKPIYLVGDSFGGC----LALAVAARNPTIDLILILSNPA--TSF 279
P K + + G G +AL V + + + +
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGV--LGSGKTWVALDVCL---SYKVQCKMDFKIFWLNL 189
Query: 280 GRSQLQPLFPILKAMPDELHCAVPYLLSYV-MGDPIKMAMVNIENRLPPRIKLEQLSNNL 338
+L+ + L+ P S IK+ + +I+ L +K + N
Sbjct: 190 KNCNSPET--VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN-- 245
Query: 339 PALLPRLSVMSDIIPKDTLLWK---LK---LLKSASAYANSRLHAVKAEVLVLASGKDNM 392
LL V+ ++ ++ W L LL + L A + L +
Sbjct: 246 -CLL----VLLNV--QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298
Query: 393 LPSEDEAKRLNNSLQNCIVRNFKD------NGHTLL-------LEEGISLLTIIKGTCKY 439
+ DE K L L + +D + + +G++ K
Sbjct: 299 --TPDEVKSL---LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353
Query: 440 RRSRKLDSVADFLPPSRQEFKYAFDQVVGLLRVASSSVMLSTLEDGKIVKGLAGVPNEGP 499
+ + ++S + L P+ E++ FD+ LS +P
Sbjct: 354 KLTTIIESSLNVLEPA--EYRKMFDR-------------LSVFPPS--AH----IP---T 389
Query: 500 VLLVGY----------HMLLGFELYSLVEEFLREKNIMVHGIAHPEIFLGRLENSSNEFG 549
+LL ++ YSLVE+ +E I + I+L NE+
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS-----IYLELKVKLENEYA 444
Query: 550 MTDWLKVMGAVPVAARNLFKLLSTKSHVLLYPGG---------AREALHYKGEEYKLFWP 600
+ + V N+ K + + Y + H E LF
Sbjct: 445 LHRSI-------VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHP--ERMTLFRM 495
Query: 601 EQQEFVRMAARFGATIVPFGAVGEDDIADLVLD---YKDLM--SIP----VINDCVRELA 651
+F + + + A G I + + YK + + P ++N + L
Sbjct: 496 VFLDFRFLEQKIRHDSTAWNASG--SILNTLQQLKFYKPYICDNDPKYERLVNAILDFLP 553
Query: 652 RDTVNIRDDTRGEVANQALFFPG 674
+ N+ ++ AL
Sbjct: 554 KIEENLICSKYTDLLRIALMAED 576
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 52.4 bits (125), Expect = 3e-07
Identities = 35/214 (16%), Positives = 61/214 (28%), Gaps = 19/214 (8%)
Query: 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGR 281
++K S ++G S GG ALA P +L LIL P R
Sbjct: 121 VLKIATC--ELGSIDSHPALNVVIGHSMGGFQALACDVLQP--NLFHLLILIEPVV-ITR 175
Query: 282 SQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIK--------MAMVNIENRLPPRIKLEQ 333
+ P L ++ + L D M + +I
Sbjct: 176 KAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNI 235
Query: 334 LSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYAN---SRLHAVKAEVLVLASGKD 390
+ + K L + +A S + V+ + + +
Sbjct: 236 IDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARS 295
Query: 391 NMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLE 424
N P ++ L +LQN + H + +E
Sbjct: 296 NWCPPQN-QLFLQKTLQNYHLDVIPGGSHLVNVE 328
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 6e-07
Identities = 23/213 (10%), Positives = 55/213 (25%), Gaps = 52/213 (24%)
Query: 216 YDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275
+ + V H ++ +++ G S GG A+ P I + S+P
Sbjct: 69 LTKGNPDIWWAESSAAVA--HMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSP 126
Query: 276 ATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLS 335
+ + M + + ++
Sbjct: 127 ILPGKHHLVPGFLKYAEYMNR------------------------LAGKSDESTQI---- 158
Query: 336 NNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLP- 394
L +L + + + L+ VK + +G+D ++
Sbjct: 159 ------------------LAYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDG 200
Query: 395 --SEDEAKRLNNSLQNCIVRNFKDNGHTLLLEE 425
+ L N+ + + D H + +
Sbjct: 201 RLAYQLRDALINAARVDFHW-YDDAKHVITVNS 232
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 57/240 (23%)
Query: 200 KPLGKA-----FEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHASSPEKPIYLV 247
+ LG+ + + P + + V + + I +
Sbjct: 33 RMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYE-FLKNKGYEKIAVA 91
Query: 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS 307
G S GG +L + P ++ + + +S+ +L+ Y
Sbjct: 92 GLSLGGVFSLKLGYTVPIEGIVTM--CAPM-YIKSEETMYEGVLE-----------YARE 137
Query: 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA 367
Y + + E + P TL L+
Sbjct: 138 YKKREGKSEEQIEQE----------------MEKFKQ-------TPMKTLKA----LQEL 170
Query: 368 SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVR--NFKDNGHTLLLEE 425
A L + A V+ + D M+ + A + N +++ + + ++ +GH + L++
Sbjct: 171 IADVRDHLDLIYAPTFVVQARHDEMINPDS-ANIIYNEIESPVKQIKWYEQSGHVITLDQ 229
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 30/183 (16%)
Query: 241 EKPIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDEL 298
+ + +VG+S GG L V+ + +L+ L+L A + L PI+
Sbjct: 105 DGKVSIVGNSMGGATGLGVSVLHS--ELVNALVLMGSA-GLVVEIHEDLRPIINYDFTRE 161
Query: 299 HCAVPYLLSYVMGDPIKM--AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDT 356
+ +L+ + D K+ AM+N R A + + + +
Sbjct: 162 --GMVHLVKALTNDGFKIDDAMINS------RYTYATDEATRKAYVATMQWIRE------ 207
Query: 357 LLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKD 416
+ Y + V+ LV+ D ++P E A + + + +
Sbjct: 208 --------QGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVE-TAYKFLDLIDDSWGYIIPH 258
Query: 417 NGH 419
GH
Sbjct: 259 CGH 261
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 38/207 (18%)
Query: 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATS 278
G + V + + +K I L+G S GG + L VA + + ++ +
Sbjct: 63 VYGYIDNVANFITNSEVTKHQKNITLIGYSMGGAIVLGVALKKL--PNVRKVVSLSGGAR 120
Query: 279 FGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNL 338
F + + I D + + + I+N L + E L +
Sbjct: 121 FDKLDKDFMEKIYHNQLDN--------------NYLLECIGGIDNPLSEKY-FETLEKDP 165
Query: 339 PALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398
++ L I D + L + V + + + + E
Sbjct: 166 DIMINDLIACKLI---DLV---------------DNLKNIDIPVKAIVAKDELLTLVEY- 206
Query: 399 AKRLNNSLQNCIVRNFKDNGHTLLLEE 425
++ + ++N ++ F+ H LL+
Sbjct: 207 SEIIKKEVENSELKIFETGKHFLLVVN 233
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 3e-06
Identities = 31/210 (14%), Positives = 62/210 (29%), Gaps = 46/210 (21%)
Query: 218 RTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277
RT F V VEE + I++ G S GG L L +A +P I I+ ++
Sbjct: 87 RTTFHDWVASVEEGYG--WLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVD 144
Query: 278 SFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNN 337
+ L Y+ + +++ +
Sbjct: 145 IPAIAAGMTGG--------------GELPRYLDSIGSDLKNPDVKELAYEKTPTAS---- 186
Query: 338 LPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSED 397
L L A ++L + L+ S +D+++P +
Sbjct: 187 -----------------------LLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGN 223
Query: 398 EAKRLNNSLQNCIVR--NFKDNGHTLLLEE 425
A + + + +++ H L+
Sbjct: 224 -ADIIFQGISSTEKEIVRLRNSYHVATLDY 252
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 4e-06
Identities = 28/186 (15%), Positives = 59/186 (31%), Gaps = 23/186 (12%)
Query: 242 KPIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDELH 299
+ L G S+GG LA A+A D + L+ P + S+ I D
Sbjct: 89 RRFILYGHSYGGYLAQAIAFHLK--DQTLGVFLTCPVITADHSKRLTGKHINILEEDINP 146
Query: 300 CAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLW 359
+ + V I N+ + + T +
Sbjct: 147 VENKEYFADFLSM-----NVIINNQAWHDYQNLIIPGLQKE-------------DKTFID 188
Query: 360 KLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGH 419
+L+ S + + + ++ D ++ ++ +L N +N + GH
Sbjct: 189 QLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQE-QLKLINHNENGEIVLLNRTGH 247
Query: 420 TLLLEE 425
L++++
Sbjct: 248 NLMIDQ 253
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 6e-06
Identities = 28/190 (14%), Positives = 59/190 (31%), Gaps = 24/190 (12%)
Query: 244 IYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATSF----GRSQLQPLFPI-LKAMPD 296
G S GG LAL A + + +I+ A S + + + +
Sbjct: 93 WGFAGHSAGGMLALVYATEAQ--ESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVS 150
Query: 297 ELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKL-EQLSNNLPALLPRLSVMSDIIPKD 355
++ + + +++ +L N+ + RL+ + KD
Sbjct: 151 IMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKD 210
Query: 356 TLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFK 415
+ +L VK + D P + + N + N + F+
Sbjct: 211 YDVR-------------QKLKFVKIPSFIYCGKHDVQCPYIF-SCEIANLIPNATLTKFE 256
Query: 416 DNGHTLLLEE 425
++ H +EE
Sbjct: 257 ESNHNPFVEE 266
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} Length = 316 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 26/187 (13%), Positives = 50/187 (26%), Gaps = 23/187 (12%)
Query: 174 RPLKGSPTLLFL-PGIDGLGLGLILHHKPLGKAFEVRCLHIPVY-----DRTPFEGLVKF 227
++ S LFL I+G L L IP Y P + +
Sbjct: 40 NSVQSSERPLFLVHPIEGSTTVF----HSL-----ASRLSIPTYGLQCTRAAPLDSIHSL 90
Query: 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--------NPTIDLILILSNPATSF 279
+ PE P + G S+G C+A + ++ L L +P
Sbjct: 91 AAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPTYVL 150
Query: 280 GRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLP 339
+Q + A+ + + + + ++ + +
Sbjct: 151 AYTQSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDLII 210
Query: 340 ALLPRLS 346
L
Sbjct: 211 KSHQGLD 217
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A Length = 283 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 3e-05
Identities = 25/187 (13%), Positives = 49/187 (26%), Gaps = 23/187 (12%)
Query: 174 RPLKGSPTLLFL-PGIDGLGLGLILHHKPLGKAFEVRCLHIPVY-----DRTPFEGLVKF 227
++ S LFL I+G L L IP Y P + +
Sbjct: 18 NSVQSSERPLFLVHPIEGSTTVF----HSL-----ASRLSIPTYGLQCTRAAPLDSIHSL 68
Query: 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--------NPTIDLILILSNPATSF 279
+ PE P + G S+G C+A + ++ L L +P
Sbjct: 69 AAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPTYVL 128
Query: 280 GRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLP 339
+ + A+ + + + + ++ + +
Sbjct: 129 AYTGSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDLII 188
Query: 340 ALLPRLS 346
L
Sbjct: 189 KSHQGLD 195
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 31/260 (11%), Positives = 71/260 (27%), Gaps = 52/260 (20%)
Query: 180 PTLLFLPGIDGLGLGLILHHKPLGKAFEVRCL---------HIPVYDRTPFEGLVKFVEE 230
++ + G+ G L + + L + + PV + + + + + +
Sbjct: 17 SPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREPVMN---YPAMAQDLVD 73
Query: 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTI--DLILILSNPATSFGRSQLQPLF 288
T+ +G S GG +A+ A P L+ I P R +F
Sbjct: 74 TLDALQI----DKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRH-DEIF 128
Query: 289 PILKAMPDEL----HCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPR 344
+ A+ + A + ++ + + ++ R + L + P ++
Sbjct: 129 AAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIV-- 186
Query: 345 LSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404
++ A L + G + + L
Sbjct: 187 --------------------------GWEKIPAWDHPALFIPGGNSPYVSEQY-RDDLLA 219
Query: 405 SLQNCIVRNFKDNGHTLLLE 424
GH + E
Sbjct: 220 QFPQARAHVIAGAGHWVHAE 239
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 30/185 (16%), Positives = 62/185 (33%), Gaps = 26/185 (14%)
Query: 246 LVGDSFGGCLALAVAARNPTIDLI--LILSNPA----TSFGRSQLQPLFPILKAMPDELH 299
LVG++ GG A+ A P L+L P F + + + K
Sbjct: 110 LVGNALGGGTAVRFALDYP--ARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTR 167
Query: 300 CAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLW 359
+ L ++ D + ++ R L +L A + + ++W
Sbjct: 168 ENLEAFLRVMVYDKNLITPELVDQRF----ALASTPESLTATRAMGKSFAGADFEAGMMW 223
Query: 360 KLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGH 419
+ ++ ++ VL++ +D + P D A ++ + F GH
Sbjct: 224 R-------------EVYRLRQPVLLIWGREDRVNPL-DGALVALKTIPRAQLHVFGQCGH 269
Query: 420 TLLLE 424
+ +E
Sbjct: 270 WVQVE 274
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 27/181 (14%), Positives = 57/181 (31%), Gaps = 29/181 (16%)
Query: 246 LVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303
++G S GG + R P + + + +PA +F L V
Sbjct: 138 MIGLSLGGLHTMNFLLRMP--ERVKSAAILSPAETFLPFHHDFYKYALGLTASN---GVE 192
Query: 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKL 363
L+++M D + + ++ + + N P V +D
Sbjct: 193 TFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTD------------- 239
Query: 364 LKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLL 423
L + + +L+L + + R ++ + + K+ GH L +
Sbjct: 240 ---------EELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSM 290
Query: 424 E 424
E
Sbjct: 291 E 291
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 3e-05
Identities = 62/378 (16%), Positives = 114/378 (30%), Gaps = 73/378 (19%)
Query: 63 NSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGALIDVGNGTLKPRVEKK 122
+ FRA A+ + + A+ G E G L L+P
Sbjct: 40 RDEKGALFRAHARYCADACGELDLERAPALGGS--FAGLEPMGLLW-----ALEPEKPFW 92
Query: 123 KLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGR-------- 174
+ +K + V + G D L + + P W V GR
Sbjct: 93 RFLKRDVQIPFVVELEVLDGHDPEPGRLLCQAQHERHFLPPGVWRQSVRAGRVRATLFLP 152
Query: 175 -PLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--FEGL-VKFVEE 230
P ++ + GI G GL G F L ++ P + + +++ EE
Sbjct: 153 PGPGPFPGIIDIFGIGG-GLLEYRASLLAGHGFATLALAYYNFEDLPNNMDNISLEYFEE 211
Query: 231 TVR--REHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF 288
V +H I L+G S G + L++A+ + + ++ S +
Sbjct: 212 AVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKNVSATVSINGSGISGNTAIN---- 267
Query: 289 PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVM 348
+ Y L IK+A + + + R L N P+++P
Sbjct: 268 -----YKHSSIPPLGYDLRR-----IKVAFSGLVDIVDIRNALVGGYKN-PSMIP----- 311
Query: 349 SDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN 408
+ + +L++ D+ SE A+ ++ LQ
Sbjct: 312 --------------------------IEKAQGPILLIVGQDDHNWRSELYAQTVSERLQA 345
Query: 409 CIVRN-----FKDNGHTL 421
+ GH +
Sbjct: 346 HGKEKPQIICYPGTGHYI 363
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 5e-05
Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 20/181 (11%)
Query: 246 LVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303
+VG+S GG + L + P + + L + ++ L +L D
Sbjct: 107 IVGNSMGGAVTLQLVVEAP--ERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYR 164
Query: 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKL 363
L+ + DP + +K N P + VM +K
Sbjct: 165 ELIHSFVYDPENFP------GMEEIVKSRFEVANDPEVRRIQEVM---------FESMKA 209
Query: 364 LKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLL 423
+ + L + +VLV +D ++P D + L L++ + GH L
Sbjct: 210 GMESLVIPPATLGRLPHDVLVFHGRQDRIVPL-DTSLYLTKHLKHAELVVLDRCGHWAQL 268
Query: 424 E 424
E
Sbjct: 269 E 269
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 6e-05
Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 24/179 (13%)
Query: 243 PIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDELHC 300
++VG++FGG LA+A A R + + ++L A + L + P
Sbjct: 96 KAHIVGNAFGGGLAIATALRYS--ERVDRMVLMGAAG-TRFDVTEGLNAVWGYTPSIE-- 150
Query: 301 AVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWK 360
+ LL D + R I + ++ P
Sbjct: 151 NMRNLLDIFAYDRSLVTDELARLRYEASI-QPGFQESFSSMFPEP--------------- 194
Query: 361 LKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGH 419
+ A A ++ + + E L++ +D ++P + RL + + F GH
Sbjct: 195 RQRWIDALASSDEDIKTLPNETLIIHGREDQVVPL-SSSLRLGELIDRAQLHVFGRCGH 252
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 6e-05
Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 28/185 (15%)
Query: 246 LVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303
L+G+S GG ++A + P + + L+L T +K +
Sbjct: 111 LLGNSMGGHSSVAFTLKWP--ERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTI 168
Query: 304 ----YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLW 359
++ + D + E R L + + L + + +
Sbjct: 169 ENLKLMMDIFVFDTSDLTDALFEAR------LNNMLSRRDHLENFVKSLEANPKQFPDFG 222
Query: 360 KLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGH 419
RL +KA+ L++ D +P + RL + + + F+D GH
Sbjct: 223 -------------PRLAEIKAQTLIVWGRNDRFVPMD-AGLRLLSGIAGSELHIFRDCGH 268
Query: 420 TLLLE 424
E
Sbjct: 269 WAQWE 273
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 7e-05
Identities = 40/219 (18%), Positives = 68/219 (31%), Gaps = 37/219 (16%)
Query: 180 PTLLFLPGIDGLGLGLILHHKPLGKAFEVR----CLHIPVY--------DRTPFEGLVKF 227
PTL L + L L H G L IP Y + L +
Sbjct: 2230 PTLTRLNSVQSAERPLFLVHPIEGSITVFHGLAAKLSIPTYGLQCTGAAPLDSIQSLASY 2289
Query: 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR------NPTIDLILILSNPATSFGR 281
E +R+ PE P + G S+G C+A + ++ + L L + + +F
Sbjct: 2290 YIECIRQ---VQPEGPYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDGSHTFVL 2346
Query: 282 SQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR--IKLEQLSNNLP 339
+ Q + + + A AM + K+ + L
Sbjct: 2347 AYTQSVRAKMTPGCEAEAEA--------------KAMYFFVQQFTDMEQGKVLEALIPLQ 2392
Query: 340 ALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAV 378
L R++ D+I + L A+ +L A
Sbjct: 2393 GLEARVAATVDLITQSHAGLDRHALSFAARSFYQKLRAA 2431
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 9e-05
Identities = 38/187 (20%), Positives = 69/187 (36%), Gaps = 23/187 (12%)
Query: 242 KPIYLVGDSFGGCLALAVAARNPT-ID-LILILSNP--ATSFGRSQLQPLFPILKAMPDE 297
K I L G S GG +AL A I LIL ++P + + + + + D
Sbjct: 83 KSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDI 142
Query: 298 LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTL 357
+ ++ P+ + + + + +I+ ++LS + + L +
Sbjct: 143 A--GIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPN-- 198
Query: 358 LWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDN 417
LW RL +K L+LA D AK++ N + N +
Sbjct: 199 LW-------------PRLKEIKVPTLILAGEYDEKFVQ--IAKKMANLIPNSKCKLISAT 243
Query: 418 GHTLLLE 424
GHT+ +E
Sbjct: 244 GHTIHVE 250
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 37/177 (20%)
Query: 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFG 280
F V+ V + V P P++L+G S GG +A+ AA P ++L +P
Sbjct: 111 FHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPL---- 166
Query: 281 RSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPA 340
+ A P+ K+ + N + P + L + +
Sbjct: 167 ----------VLANPESAT-------------TFKVLAAKVLNLVLPNLSLGPID---SS 200
Query: 341 LLPRLSVMSDIIPKDTLLWKLKL-------LKSASAYANSRLHAVKAEVLVLASGKD 390
+L R DI D L+ + L L +A + L + L+L D
Sbjct: 201 VLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSAD 257
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 1e-04
Identities = 63/379 (16%), Positives = 110/379 (29%), Gaps = 77/379 (20%)
Query: 64 SQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGALIDVGNGTLKPRVEKKK 123
+ F+A A+ + + A+ G E L+P +
Sbjct: 57 DEKGALFQAHARYRADTLGELDLERAPALGGSFAGLEPMGLLW-------ALEPEKPLVR 109
Query: 124 LVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRPL------- 176
LVK + L V + G D L + P PV GR
Sbjct: 110 LVKRDVRTPLAVELEVLDGHDPDPGRLLCQTRHERYFLPPGVRREPVRVGRVRGTLFLPP 169
Query: 177 --KGSPTLLFLPGIDGLGLGLILHHKPL--GKAFEVRCLHIPVYDRTP--FEGL-VKFVE 229
P ++ + G G GL+ + L GK F V L Y+ P E L +++ E
Sbjct: 170 EPGPFPGIVDMFGTGG---GLLEYRASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFE 226
Query: 230 ETVR--REHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL 287
E + H + L+G S GG L L++A+ I ++++ + G +
Sbjct: 227 EAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLR--- 283
Query: 288 FPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSV 347
E V + +
Sbjct: 284 ------YKGETLPPVGVNRNRIK------------------------------------- 300
Query: 348 MSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407
++ D + L+ + + ++ L L D+ SE A LQ
Sbjct: 301 VTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQ 360
Query: 408 -----NCIVRNFKDNGHTL 421
+ + + GH +
Sbjct: 361 AHGRRKPQIICYPETGHYI 379
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* Length = 244 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 21/87 (24%), Positives = 28/87 (32%), Gaps = 12/87 (13%)
Query: 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVY--DRTPFEGLVKFVEETVRRE 235
G L P I G G+ K L + VY + ++ +
Sbjct: 21 GGKNLFCFPPISGFGIYF----KDLALQLNHKA---AVYGFHFIEEDSRIEQYVSRITEI 73
Query: 236 HASSPEKPIYLVGDSFGGCLALAVAAR 262
PE P L+G S GG LA V
Sbjct: 74 Q---PEGPYVLLGYSAGGNLAFEVVQA 97
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 34/179 (18%), Positives = 58/179 (32%), Gaps = 41/179 (22%)
Query: 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATS 278
F V+ V + V P P++L+G S GG +A+ AA P ++L +P
Sbjct: 93 FHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERP--GHFAGMVLISPLV- 149
Query: 279 FGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNL 338
L + K+ + N + P + +
Sbjct: 150 --------------------------LANPESATTFKVLAAKVLNSVLPNLSSGPID--- 180
Query: 339 PALLPRLSVMSDIIPKDTLLWKLKL-------LKSASAYANSRLHAVKAEVLVLASGKD 390
++L R DI D L+ + L L +A + L + L+L D
Sbjct: 181 SSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSAD 239
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A Length = 300 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 5e-04
Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 10/92 (10%)
Query: 178 GSPTLLFLPGIDGLGLGLILHH--KPLGKAFEVRCLHIPVYDR-----TPFEGLVKFVEE 230
G T++ G + L VR + P Y+ + + +
Sbjct: 66 GEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQAD 125
Query: 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262
V R +KP + G S G +A A+A
Sbjct: 126 AVIRTQ---GDKPFVVAGHSAGALMAYALATE 154
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A Length = 319 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 6e-04
Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 16/116 (13%)
Query: 159 PDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH--KPLGKAFEVRCLHIPVY 216
+ P R +G L+ G G + + + +P Y
Sbjct: 70 SERLDPVLLAGGPTDRA-EGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGY 128
Query: 217 -DRTP---------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262
T + + + R + + P+ L+G + G LA +A R
Sbjct: 129 GTGTGTGTALLPADLDTALDAQARAILRA---AGDAPVVLLGHAGGALLAHELAFR 181
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 6e-04
Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 10/105 (9%)
Query: 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDE 297
IY+ G S GG + AA D+I LI +PA LK P+
Sbjct: 98 FVTDIYMAGHSQGGLSVMLAAAMER--DIIKALIPLSPAAMIPEIARTGELLGLKFDPE- 154
Query: 298 LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALL 342
+P L G +K V + + +++ P L+
Sbjct: 155 ---NIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKY--TKPVLI 194
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 7e-04
Identities = 32/261 (12%), Positives = 65/261 (24%), Gaps = 37/261 (14%)
Query: 177 KGSPTLLFLP--GIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--------FEGLVK 226
+G+P +FL G L + + + P +P V
Sbjct: 39 EGNPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQANVGLRDWVN 98
Query: 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-ID-LILILSNPATSFGRSQL 284
+ + L S GG AL + ++ I + +
Sbjct: 99 AILMIFEHFKF----QSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFS 154
Query: 285 QPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPR 344
L+P L +L + ++ + +QL +
Sbjct: 155 SDLYPQLALRRQKLK----------TAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQ 204
Query: 345 LSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404
L+ + L K+ + + K +V + E E +
Sbjct: 205 LNDVQ-------SLPDFKIRLALGEEDFKTGISEKIPSIVFSESFREKEYLESEYLNKHT 257
Query: 405 SLQNCIVRNFKDNGHTLLLEE 425
+ ++ H L E
Sbjct: 258 QTK--LI--LCGQHHYLHWSE 274
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 756 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.96 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.96 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.95 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.94 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.94 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.94 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.94 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.94 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.94 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.94 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.94 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.94 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.93 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.93 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.93 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.93 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.93 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.93 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.93 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.93 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.93 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.93 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.93 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.93 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.93 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.93 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.93 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.93 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.93 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.93 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.92 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.92 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.92 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.92 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.92 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.92 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.92 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.92 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.92 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.92 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.92 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.92 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.92 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.91 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.91 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.91 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.91 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.91 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.91 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.91 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.91 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.91 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.91 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.91 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.91 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.91 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.91 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.91 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.9 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.9 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.9 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.9 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.9 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.9 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.9 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.9 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.89 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.89 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.89 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.89 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.89 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.89 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.89 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.88 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.88 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.88 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.88 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.88 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.88 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.88 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.88 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.88 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.87 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.87 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.78 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.87 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.86 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.86 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.86 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.86 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.85 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.85 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.84 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.84 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.83 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.82 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.82 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.82 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.82 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.82 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.81 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.8 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.8 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.79 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.79 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.79 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.78 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.78 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.78 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.78 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.78 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.78 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.77 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.77 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.77 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.76 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.76 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.76 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.75 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.75 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.74 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.74 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.74 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.73 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.73 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.73 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.73 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.73 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.72 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.72 | |
| 1iuq_A | 367 | Glycerol-3-phosphate acyltransferase; open twisted | 99.72 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.71 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.71 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.71 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.68 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.68 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.68 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.67 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.67 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.67 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.66 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.66 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.66 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.66 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.66 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.66 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.65 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.65 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.65 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.65 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.64 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.63 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.62 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.62 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.62 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.61 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.61 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.61 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.61 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.6 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.59 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.59 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.58 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.58 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.58 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.57 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.57 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.56 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.56 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.55 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.55 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.53 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.53 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.53 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.52 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.52 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.51 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.51 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.51 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.5 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.49 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.48 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.47 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.47 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.47 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.47 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.45 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.44 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.44 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.44 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.44 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.43 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.43 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.43 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.41 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.39 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.38 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.37 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.37 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.35 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.34 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.32 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.32 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.31 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.29 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.29 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.28 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.26 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.21 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.19 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.17 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.14 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.13 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.1 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.05 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.02 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.02 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.0 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.0 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 98.99 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 98.99 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 98.92 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 98.88 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 98.86 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 98.78 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 98.73 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 98.57 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.14 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.0 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 97.98 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 97.87 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 97.69 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 97.67 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.66 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.65 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 97.58 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.4 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 97.16 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.14 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 97.05 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 96.95 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 96.94 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 96.86 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 96.85 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 96.8 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 96.73 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 96.71 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 96.63 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 96.46 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.43 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 96.42 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 96.4 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 96.4 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 96.38 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 96.28 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 96.14 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 96.13 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 95.67 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 95.47 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 94.98 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 94.94 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 94.76 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 94.46 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 94.42 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 94.33 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 94.3 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 94.3 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 94.23 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 93.5 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 93.38 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 93.37 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 93.27 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 90.97 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 87.24 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 86.11 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 81.45 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-28 Score=253.20 Aligned_cols=246 Identities=14% Similarity=0.098 Sum_probs=167.0
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKF 227 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~d 227 (756)
.+.+.||.. ++|...|. .++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|
T Consensus 8 ~~~~~~g~~---l~y~~~G~--~~~p~lvl~hG~~~~~~~w~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~a~d 82 (266)
T 3om8_A 8 FLATSDGAS---LAYRLDGA--AEKPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLARLGED 82 (266)
T ss_dssp EEECTTSCE---EEEEEESC--TTSCEEEEECCTTCCGGGGGGGHHHHHTTCEEEEECCTTSTTSCCCCSCCCHHHHHHH
T ss_pred EEeccCCcE---EEEEecCC--CCCCEEEEeCCCccCHHHHHHHHHHhhcCcEEEEEcCCCCCCCCCCCCCCCHHHHHHH
Confidence 345667766 56777775 2478999999999999999999999988999999999999998 58899999
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchh--HHHHhHHhH
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD--ELHCAVPYL 305 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 305 (756)
+.++++.++.. +++|+||||||.+|+.+|.++|++|+++|++++........ ........... .........
T Consensus 83 l~~~l~~l~~~----~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 156 (266)
T 3om8_A 83 VLELLDALEVR----RAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAA--QWDERIAAVLQAEDMSETAAGF 156 (266)
T ss_dssp HHHHHHHTTCS----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSH--HHHHHHHHHHHCSSSHHHHHHH
T ss_pred HHHHHHHhCCC----ceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchh--HHHHHHHHHHccccHHHHHHHH
Confidence 99999998766 89999999999999999999999999999999865432110 00000000000 000000000
Q ss_pred hhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEE
Q 004396 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (756)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI 385 (756)
+..++... ...... ...+.+... ........+......+. ..+....+.+|++|+|+|
T Consensus 157 ~~~~~~~~-------~~~~~~--~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~d~~~~l~~i~~P~Lvi 214 (266)
T 3om8_A 157 LGNWFPPA-------LLERAE--PVVERFRAM-----------LMATNRHGLAGSFAAVR--DTDLRAQLARIERPTLVI 214 (266)
T ss_dssp HHHHSCHH-------HHHSCC--HHHHHHHHH-----------HHTSCHHHHHHHHHHHH--TCBCTTTGGGCCSCEEEE
T ss_pred HHHhcChh-------hhhcCh--HHHHHHHHH-----------HHhCCHHHHHHHHHHhh--ccchhhHhcCCCCCEEEE
Confidence 00000000 000000 001111110 00011112211111111 111236688999999999
Q ss_pred EeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 386 ASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 386 ~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+|++|.+++++. ++.+.+.+|++++++++ +||++++|+|+++++.|.+
T Consensus 215 ~G~~D~~~~~~~-~~~l~~~ip~a~~~~i~-~gH~~~~e~p~~~~~~i~~ 262 (266)
T 3om8_A 215 AGAYDTVTAASH-GELIAASIAGARLVTLP-AVHLSNVEFPQAFEGAVLS 262 (266)
T ss_dssp EETTCSSSCHHH-HHHHHHHSTTCEEEEES-CCSCHHHHCHHHHHHHHHH
T ss_pred EeCCCCCCCHHH-HHHHHHhCCCCEEEEeC-CCCCccccCHHHHHHHHHH
Confidence 999999999995 99999999999999997 8999999999999999983
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-27 Score=249.52 Aligned_cols=239 Identities=13% Similarity=0.185 Sum_probs=160.1
Q ss_pred eeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccC
Q 004396 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASS 239 (756)
Q Consensus 168 ~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~ 239 (756)
+|...|.+..++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.++..
T Consensus 4 ~y~~~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~- 82 (268)
T 3v48_A 4 KLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIE- 82 (268)
T ss_dssp CCEECCCSSTTCCEEEEECCTTCCGGGGHHHHHHHHTTSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHHHTTCC-
T ss_pred EEEecCCCCCCCCEEEEeCCCCccHHHHHHHHHHHhhcCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHHHcCCC-
Confidence 4555554344689999999999999999999999988999999999999988 4889999999999997655
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHh-HHhHhh---hhcCChhH
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCA-VPYLLS---YVMGDPIK 315 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~ 315 (756)
+++|+||||||.+|+.+|.++|+++.++|++++........ .............. ...+.. ......
T Consensus 83 ---~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 153 (268)
T 3v48_A 83 ---HYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHT----RRCFQVRERLLYSGGAQAWVEAQPLFLYPA-- 153 (268)
T ss_dssp ---SEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHSCH--
T ss_pred ---CeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhh----hHHHHHHHHHHhccchhhhhhhhhhhcCch--
Confidence 89999999999999999999999999999999855321100 00000000000000 000000 000000
Q ss_pred HHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCC
Q 004396 316 MAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPS 395 (756)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~ 395 (756)
...... ......... ...........+...+..+.. .+....+.+|++|+|+|+|++|.++|.
T Consensus 154 ----~~~~~~-----~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--~d~~~~l~~i~~P~Lii~G~~D~~~p~ 216 (268)
T 3v48_A 154 ----DWMAAR-----APRLEAEDA------LALAHFQGKNNLLRRLNALKR--ADFSHHADRIRCPVQIICASDDLLVPT 216 (268)
T ss_dssp ----HHHHTT-----HHHHHHHHH------HHHHTCCCHHHHHHHHHHHHH--CBCTTTGGGCCSCEEEEEETTCSSSCT
T ss_pred ----hhhhcc-----cccchhhHH------HHHhhcCchhHHHHHHHHHhc--cchhhhhhcCCCCeEEEEeCCCcccCH
Confidence 000000 000000000 000000111111111111111 112366889999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 396 EDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 396 ~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
+. ++.+.+.+|++++++++++||++++|+|+.+++.|.
T Consensus 217 ~~-~~~l~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~ 254 (268)
T 3v48_A 217 AC-SSELHAALPDSQKMVMPYGGHACNVTDPETFNALLL 254 (268)
T ss_dssp HH-HHHHHHHCSSEEEEEESSCCTTHHHHCHHHHHHHHH
T ss_pred HH-HHHHHHhCCcCeEEEeCCCCcchhhcCHHHHHHHHH
Confidence 95 999999999999999999999999999999999998
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-27 Score=242.65 Aligned_cols=245 Identities=15% Similarity=0.121 Sum_probs=163.3
Q ss_pred cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHHHH
Q 004396 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEE 230 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~ 230 (756)
+.+|.. ++|...|.+..++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+
T Consensus 8 ~~~g~~---l~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~ 84 (266)
T 2xua_A 8 AVNGTE---LHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYDTRGHGHSEAPKGPYTIEQLTGDVLG 84 (266)
T ss_dssp ECSSSE---EEEEEESCSSSCCCEEEEECCTTCCGGGGGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHH
T ss_pred EECCEE---EEEEEcCCccCCCCeEEEecCccCCHHHHHHHHHHHhcCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 445655 46666665211278999999999999999999999988899999999999998 58899999999
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhH-HHHhHHhHhhhh
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDE-LHCAVPYLLSYV 309 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 309 (756)
++++++.. +++|+||||||.+|+.+|.++|++|+++|++++....... ............. ........+...
T Consensus 85 ~l~~l~~~----~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (266)
T 2xua_A 85 LMDTLKIA----RANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSP--EVWVPRAVKARTEGMHALADAVLPRW 158 (266)
T ss_dssp HHHHTTCC----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCH--HHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHhcCCC----ceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCch--HHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 99997765 8999999999999999999999999999999986543111 0000000000000 000000000000
Q ss_pred cCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCC
Q 004396 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGK 389 (756)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~ 389 (756)
..... .. ..+ ...+.+... ........+......+.. .+....+.++++|+|+|+|++
T Consensus 159 ~~~~~-------~~-~~~-~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lvi~G~~ 216 (266)
T 2xua_A 159 FTADY-------ME-REP-VVLAMIRDV-----------FVHTDKEGYASNCEAIDA--ADLRPEAPGIKVPALVISGTH 216 (266)
T ss_dssp SCHHH-------HH-HCH-HHHHHHHHH-----------HHTSCHHHHHHHHHHHHH--CCCGGGGGGCCSCEEEEEETT
T ss_pred cCccc-------cc-CCH-HHHHHHHHH-----------HhhCCHHHHHHHHHHHhc--cCchhhhccCCCCEEEEEcCC
Confidence 00000 00 000 000011000 000111111111111111 112356788999999999999
Q ss_pred CCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 390 DNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 390 D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|.+++++. ++.+.+.++++++++++ +||++++|+|+++++.|.+
T Consensus 217 D~~~~~~~-~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~ 260 (266)
T 2xua_A 217 DLAATPAQ-GRELAQAIAGARYVELD-ASHISNIERADAFTKTVVD 260 (266)
T ss_dssp CSSSCHHH-HHHHHHHSTTCEEEEES-CCSSHHHHTHHHHHHHHHH
T ss_pred CCcCCHHH-HHHHHHhCCCCEEEEec-CCCCchhcCHHHHHHHHHH
Confidence 99999985 89999999999999999 9999999999999999983
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-26 Score=237.56 Aligned_cols=250 Identities=15% Similarity=0.153 Sum_probs=158.1
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKF 227 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~d 227 (756)
+.+.||.. ++|...|+ +++|||+||++++...|..+++.| +++|+|+++|+||||.| +++++++|
T Consensus 3 ~~~~~g~~---l~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~d 75 (271)
T 3ia2_A 3 FVAKDGTQ---IYFKDWGS----GKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADD 75 (271)
T ss_dssp EECTTSCE---EEEEEESS----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHH
T ss_pred EEcCCCCE---EEEEccCC----CCeEEEECCCCCcHHHHHHHHHHHHhCCceEEEecCCCCccCCCCCCCCCHHHHHHH
Confidence 45667776 56777776 678999999999999999999999 56899999999999998 48899999
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC-CCcceEEEEeCCCCcCCcCC--cCC-c-hhHHhhchhHHHHhH
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQ--LQP-L-FPILKAMPDELHCAV 302 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~-P~~v~~lVLi~p~~~~~~~~--~~~-~-~~~~~~~~~~~~~~~ 302 (756)
+.++++.++.. +++|+||||||.+++.+++++ |++++++|++++........ ... . ......+........
T Consensus 76 ~~~~l~~l~~~----~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (271)
T 3ia2_A 76 IAQLIEHLDLK----EVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDR 151 (271)
T ss_dssp HHHHHHHHTCC----SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC----CceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHhhH
Confidence 99999998765 899999999999777766654 89999999998754321111 000 0 011111110000000
Q ss_pred HhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH-HHHHhhhccCCCCc
Q 004396 303 PYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHAVKAE 381 (756)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P 381 (756)
...+.... .+ ............ ........... .. ........+... ..+....+.++++|
T Consensus 152 ~~~~~~~~-~~--~~~~~~~~~~~~-~~~~~~~~~~~-----------~~---~~~~~~~~~~~~~~~~~~~~l~~i~~P 213 (271)
T 3ia2_A 152 AQFISDFN-AP--FYGINKGQVVSQ-GVQTQTLQIAL-----------LA---SLKATVDCVTAFAETDFRPDMAKIDVP 213 (271)
T ss_dssp HHHHHHHH-HH--HHTGGGTCCCCH-HHHHHHHHHHH-----------HS---CHHHHHHHHHHHHHCBCHHHHTTCCSC
T ss_pred HHHHHHhh-Hh--hhccccccccCH-HHHHHHHhhhh-----------hc---cHHHHHHHHHHhhccCCcccccCCCCC
Confidence 00000000 00 000000000000 00000000000 00 000111111111 01113567899999
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 382 VLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 382 vLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
+|+|+|++|.++|.+...+.+.+.++++++++++++||++++|+|+++++.|.
T Consensus 214 ~Lvi~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 266 (271)
T 3ia2_A 214 TLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLL 266 (271)
T ss_dssp EEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHH
T ss_pred EEEEEeCCCCcCChHHHHHHHHHhCCCceEEEEcCCCCcccccCHHHHHHHHH
Confidence 99999999999998842455677789999999999999999999999999998
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-26 Score=241.75 Aligned_cols=250 Identities=16% Similarity=0.113 Sum_probs=164.2
Q ss_pred cccCCC-CCceeeeeccCCCCCCCCCEEEEECCCC---CchhhHHHhHhhhcCCcEEEEeccCCCCCC--------ChhH
Q 004396 156 IIKPDG-GPPRWFCPVDCGRPLKGSPTLLFLPGID---GLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEG 223 (756)
Q Consensus 156 ~~~~dg-~~~~~~~~~~~G~~~~~~p~lV~lHG~~---~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~ 223 (756)
++..+| .. ++|...|+. .+|+|||+||++ ++...|..+++.|++.|+|+++|+||||.| ++++
T Consensus 17 ~~~~~g~~~---l~y~~~G~g--~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 91 (291)
T 2wue_A 17 EVDVDGPLK---LHYHEAGVG--NDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRY 91 (291)
T ss_dssp EEESSSEEE---EEEEEECTT--CSSEEEEECCCCTTCCHHHHTTTTHHHHTTTSEEEEECCTTSTTSCCCSCCSSHHHH
T ss_pred EEEeCCcEE---EEEEecCCC--CCCcEEEECCCCCccchHHHHHHHHHHHHhcCEEEEECCCCCCCCCCCCCCCcCHHH
Confidence 344566 55 466666651 135999999998 788899999999987899999999999988 3688
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCC-chhHHhhchhHHH---
Q 004396 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP-LFPILKAMPDELH--- 299 (756)
Q Consensus 224 ~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~-~~~~~~~~~~~~~--- 299 (756)
+++|+.+++++++.. +++|+||||||.+|+.+|.++|++|+++|++++..... ..... .......+.....
T Consensus 92 ~a~dl~~~l~~l~~~----~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
T 2wue_A 92 AAMALKGLFDQLGLG----RVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSI-NLFAPDPTEGVKRLSKFSVAPT 166 (291)
T ss_dssp HHHHHHHHHHHHTCC----SEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCC-CSSSCSSCHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhCCC----CeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCc-cccccccchhhHHHHHHhccCC
Confidence 999999999998765 89999999999999999999999999999999865321 11110 0000000000000
Q ss_pred -HhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHH------HHHh
Q 004396 300 -CAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS------AYAN 372 (756)
Q Consensus 300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 372 (756)
......+.....++. .... +......... ................. ....
T Consensus 167 ~~~~~~~~~~~~~~~~---------~~~~-~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (291)
T 2wue_A 167 RENLEAFLRVMVYDKN---------LITP-ELVDQRFALA-------------STPESLTATRAMGKSFAGADFEAGMMW 223 (291)
T ss_dssp HHHHHHHHHTSCSSGG---------GSCH-HHHHHHHHHH-------------TSHHHHHHHHHHHHHHTSTTGGGGCGG
T ss_pred HHHHHHHHHHhccCcc---------cCCH-HHHHHHHHHh-------------cCchHHHHHHHHHhhccccccccchhH
Confidence 000111111111110 0000 0011110000 01111111111110000 0011
Q ss_pred hhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 373 SRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 373 ~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
..+.++++|+|+|+|++|.++|.+. ++.+.+.+|++++++++++||++++|+|+++++.|. .|+..
T Consensus 224 ~~l~~i~~P~lvi~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 289 (291)
T 2wue_A 224 REVYRLRQPVLLIWGREDRVNPLDG-ALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTI--EFLGG 289 (291)
T ss_dssp GTGGGCCSCEEEEEETTCSSSCGGG-GHHHHHHSTTEEEEEESSCCSCHHHHTHHHHHHHHH--HHTTC
T ss_pred HHHhhCCCCeEEEecCCCCCCCHHH-HHHHHHHCCCCeEEEeCCCCCChhhhCHHHHHHHHH--HHHhc
Confidence 5678999999999999999999985 889999999999999999999999999999999998 45543
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.4e-26 Score=238.42 Aligned_cols=252 Identities=16% Similarity=0.168 Sum_probs=161.4
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchh---hHHHhHhhhcCCcEEEEeccCCCCCC--------ChhHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL---GLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGL 224 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~---~~~~~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~~ 224 (756)
.+..+|.. ++|...|+ +|+|||+||++.+.. .|..+++.|+++|+|+++|+||||.| +++++
T Consensus 9 ~~~~~g~~---l~y~~~G~----g~~vvllHG~~~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~ 81 (282)
T 1iup_A 9 SILAAGVL---TNYHDVGE----GQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSW 81 (282)
T ss_dssp EEEETTEE---EEEEEECC----SSEEEEECCCCTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHH
T ss_pred eEEECCEE---EEEEecCC----CCeEEEECCCCCCccHHHHHHHHHHhhccCCEEEEECCCCCCCCCCCCCCCCCHHHH
Confidence 34445554 56767775 678999999975543 78888899988999999999999988 47899
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHh
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (756)
++|+.+++++++.. +++|+||||||.+|+.+|.++|++|+++|++++...... ............+. ...+..
T Consensus 82 a~dl~~~l~~l~~~----~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~ 154 (282)
T 1iup_A 82 VDHIIGIMDALEIE----KAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFD-VTEGLNAVWGYTPS--IENMRN 154 (282)
T ss_dssp HHHHHHHHHHTTCC----SEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCC-CCHHHHHHHTCCSC--HHHHHH
T ss_pred HHHHHHHHHHhCCC----ceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCC-CCHHHHHHhcCCCc--HHHHHH
Confidence 99999999997655 899999999999999999999999999999998653211 00000000000000 000111
Q ss_pred HhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhh-hhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEE
Q 004396 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRL-SVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVL 383 (756)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 383 (756)
++.....++. .... +........... +.. ............. ...... ...+.+.++++|+|
T Consensus 155 ~~~~~~~~~~---------~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~l~~i~~P~l 217 (282)
T 1iup_A 155 LLDIFAYDRS---------LVTD-ELARLRYEASIQ--PGFQESFSSMFPEPRQR----WIDALA-SSDEDIKTLPNETL 217 (282)
T ss_dssp HHHHHCSSGG---------GCCH-HHHHHHHHHHTS--TTHHHHHHHHSCSSTHH----HHHHHC-CCHHHHTTCCSCEE
T ss_pred HHHHhhcCcc---------cCCH-HHHHHHHhhccC--hHHHHHHHHHHhccccc----cccccc-cchhhhhhcCCCEE
Confidence 1111111110 0000 001100000000 000 0000000000000 000000 00156789999999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 384 VLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 384 vI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
+|+|++|.++|.+. ++++.+.+|++++++++++||++++|+|+++++.|. .|+.+
T Consensus 218 ii~G~~D~~~p~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 272 (282)
T 1iup_A 218 IIHGREDQVVPLSS-SLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVV--EFFNE 272 (282)
T ss_dssp EEEETTCSSSCHHH-HHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHH--HHHHT
T ss_pred EEecCCCCCCCHHH-HHHHHHhCCCCeEEEECCCCCCccccCHHHHHHHHH--HHHhc
Confidence 99999999999985 899999999999999999999999999999999998 45543
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.7e-26 Score=238.12 Aligned_cols=237 Identities=17% Similarity=0.139 Sum_probs=158.2
Q ss_pred eeeccCCCCCCCCCEEEEECCCC---CchhhHHHhH-hhhcCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHH
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGID---GLGLGLILHH-KPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRR 234 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~---~s~~~~~~~~-~~L~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~ 234 (756)
++|...|+ +|+|||+||++ ++...|..++ +.|++.|+|+++|+||||.| +++++++|+.+++++
T Consensus 25 l~y~~~G~----g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~ 100 (286)
T 2puj_A 25 IHYNEAGN----GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDA 100 (286)
T ss_dssp EEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHH
T ss_pred EEEEecCC----CCcEEEECCCCCCCCcHHHHHHHHHHHHhccCEEEEECCCCCCCCCCCCCcCcCHHHHHHHHHHHHHH
Confidence 56767775 68999999998 7888999999 99987899999999999988 368899999999999
Q ss_pred hhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCC-chhHHhhchhHHH----HhHHhHhhhh
Q 004396 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP-LFPILKAMPDELH----CAVPYLLSYV 309 (756)
Q Consensus 235 l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~ 309 (756)
++.. +++|+||||||.+|+.+|.++|++|+++|++++..... ..+.. ............. ......+...
T Consensus 101 l~~~----~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (286)
T 2puj_A 101 LDID----RAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGP-SMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVF 175 (286)
T ss_dssp TTCC----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCC-CSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHH
T ss_pred hCCC----ceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCC-CcccccchhhHHHHHHHhhCCcHHHHHHHHHHH
Confidence 7765 89999999999999999999999999999999865321 11110 0000100000000 0011111111
Q ss_pred cCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH---HHHHhhhccCCCCcEEEEE
Q 004396 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA---SAYANSRLHAVKAEVLVLA 386 (756)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~PvLvI~ 386 (756)
..++. .... +.......... ............+... ..+....+.++++|+|+|+
T Consensus 176 ~~~~~---------~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~ 233 (286)
T 2puj_A 176 LYDQS---------LITE-ELLQGRWEAIQ------------RQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITW 233 (286)
T ss_dssp CSCGG---------GCCH-HHHHHHHHHHH------------HCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEE
T ss_pred hcCCc---------cCCH-HHHHHHHHHhh------------cCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEE
Confidence 11110 0000 00000000000 0001111111111000 0012356789999999999
Q ss_pred eCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 387 G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|++|.++|.+. ++.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 234 G~~D~~~p~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 281 (286)
T 2puj_A 234 GRDDRFVPLDH-GLKLLWNIDDARLHVFSKCGAWAQWEHADEFNRLVID 281 (286)
T ss_dssp ETTCSSSCTHH-HHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHHH
T ss_pred ECCCCccCHHH-HHHHHHHCCCCeEEEeCCCCCCccccCHHHHHHHHHH
Confidence 99999999995 9999999999999999999999999999999999873
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-25 Score=236.01 Aligned_cols=251 Identities=15% Similarity=0.121 Sum_probs=156.5
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC-----------hhHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-----------FEGLV 225 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss-----------~~~~a 225 (756)
...+|.. ++|...|+ +|+|||+||++++...|..+++.|++.|+|+++|+||||.|+ +++++
T Consensus 14 ~~~~g~~---l~y~~~G~----g~~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a 86 (294)
T 1ehy_A 14 VQLPDVK---IHYVREGA----GPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAA 86 (294)
T ss_dssp EECSSCE---EEEEEEEC----SSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGCHHHHH
T ss_pred EEECCEE---EEEEEcCC----CCEEEEECCCCcchhhHHHHHHHHhhcCEEEecCCCCCCCCCCCccccccCcCHHHHH
Confidence 3445655 56767775 689999999999999999999999888999999999999873 56789
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHH-HhHHh
Q 004396 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH-CAVPY 304 (756)
Q Consensus 226 ~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 304 (756)
+|+.+++++++.. +++||||||||.+|+.+|.++|++|+++|++++........................ ..++.
T Consensus 87 ~dl~~ll~~l~~~----~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
T 1ehy_A 87 DDQAALLDALGIE----KAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAV 162 (294)
T ss_dssp HHHHHHHHHTTCC----CEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCC----CEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCcchhH
Confidence 9999999997765 899999999999999999999999999999997432111100000000000000000 00000
Q ss_pred HhhhhcCCh---hHHHHHhhh------cCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHh---
Q 004396 305 LLSYVMGDP---IKMAMVNIE------NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYAN--- 372 (756)
Q Consensus 305 ~~~~~~~~~---~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 372 (756)
.+ ..... ......... ...+. +....+...+ ............+........
T Consensus 163 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 226 (294)
T 1ehy_A 163 EV--VGSSREVCKKYFKHFFDHWSYRDELLTE-EELEVHVDNC-------------MKPDNIHGGFNYYRANIRPDAALW 226 (294)
T ss_dssp HH--HTSCHHHHHHHHHHHHHHTSSSSCCSCH-HHHHHHHHHH-------------TSTTHHHHHHHHHHHHSSSSCCCC
T ss_pred HH--hccchhHHHHHHHHHhhcccCCCCCCCH-HHHHHHHHHh-------------cCCcccchHHHHHHHHHhhhhhhc
Confidence 00 00000 000000000 00000 0001111000 000111111111111100000
Q ss_pred --hhccCCCCcEEEEEeCCCCCCCC-HHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 373 --SRLHAVKAEVLVLASGKDNMLPS-EDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 373 --~~l~~i~~PvLvI~G~~D~~vp~-~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
..+.++++|+|+|+|++|.+++. + ..+.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 227 ~~~~l~~i~~P~Lvi~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 291 (294)
T 1ehy_A 227 TDLDHTMSDLPVTMIWGLGDTCVPYAP-LIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKT 291 (294)
T ss_dssp CTGGGSCBCSCEEEEEECCSSCCTTHH-HHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHH
T ss_pred CCcccCcCCCCEEEEEeCCCCCcchHH-HHHHHHHHcCCCceEEeCCCCCChhhhCHHHHHHHHHH
Confidence 13448999999999999999985 4 37888889999999999999999999999999999984
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-26 Score=235.47 Aligned_cols=240 Identities=12% Similarity=0.065 Sum_probs=156.9
Q ss_pred eeccCCCCC-CCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC------ChhHHHHHHHHHHHHhhccCC
Q 004396 168 CPVDCGRPL-KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSP 240 (756)
Q Consensus 168 ~~~~~G~~~-~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S------s~~~~a~dv~~~i~~l~~~~~ 240 (756)
+|...|.+. .++|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.++++.++..
T Consensus 4 ~y~~~G~~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~a~dl~~~l~~l~~~-- 81 (255)
T 3bf7_A 4 NIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREPVMNYPAMAQDLVDTLDALQID-- 81 (255)
T ss_dssp CEEEECCSSCCCCCCEEEECCTTCCTTTTHHHHHHHTTTSCEEEECCTTSTTSCCCSCCCHHHHHHHHHHHHHHHTCS--
T ss_pred eeeecCccccCCCCCEEEEcCCcccHhHHHHHHHHHHhhCcEEEecCCCCCCCCCCCCcCHHHHHHHHHHHHHHcCCC--
Confidence 555556421 1478899999999999999999999987899999999999998 5889999999999998755
Q ss_pred CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHh
Q 004396 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVN 320 (756)
Q Consensus 241 ~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (756)
+++|+||||||.+|+.+|.++|++|+++|++++........ ........+.... ......... ....
T Consensus 82 --~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~-~~~~ 148 (255)
T 3bf7_A 82 --KATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR--RHDEIFAAINAVS--------ESDAQTRQQ-AAAI 148 (255)
T ss_dssp --CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSC--CCHHHHHHHHHHH--------HSCCCSHHH-HHHH
T ss_pred --CeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcc--cHHHHHHHHHhcc--------ccccccHHH-HHHH
Confidence 89999999999999999999999999999998643221111 0111111100000 000000000 0000
Q ss_pred hhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHH
Q 004396 321 IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAK 400 (756)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~ 400 (756)
.............+...+.. .........+. ..+.... ....+.++++|+|+|+|++|.+++++. .+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~---~~~~~~~--~~~~l~~i~~P~l~i~G~~D~~~~~~~-~~ 215 (255)
T 3bf7_A 149 MRQHLNEEGVIQFLLKSFVD-------GEWRFNVPVLW---DQYPHIV--GWEKIPAWDHPALFIPGGNSPYVSEQY-RD 215 (255)
T ss_dssp HTTTCCCHHHHHHHHTTEET-------TEESSCHHHHH---HTHHHHH--CCCCCCCCCSCEEEECBTTCSTTCGGG-HH
T ss_pred HhhhcchhHHHHHHHHhccC-------CceeecHHHHH---hhhhhcc--ccccccccCCCeEEEECCCCCCCCHHH-HH
Confidence 00001000001111110000 00000011110 0010000 013467899999999999999999985 89
Q ss_pred HHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 401 RLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 401 ~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.+.+.+|++++++++++||++++|+|+.+++.|.+
T Consensus 216 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 250 (255)
T 3bf7_A 216 DLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRR 250 (255)
T ss_dssp HHHHHCTTEEECCBTTCCSCHHHHCHHHHHHHHHH
T ss_pred HHHHHCCCCeEEEeCCCCCccccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999983
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=240.21 Aligned_cols=260 Identities=15% Similarity=0.166 Sum_probs=160.3
Q ss_pred CCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHHHHH
Q 004396 159 PDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEET 231 (756)
Q Consensus 159 ~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~ 231 (756)
.+|.. ++|...|+. .+|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.++
T Consensus 14 ~~g~~---l~y~~~G~g--~~~pvvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~a~dl~~l 88 (316)
T 3afi_E 14 VLGSS---MAYRETGAQ--DAPVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKPDIAYRFFDHVRYLDAF 88 (316)
T ss_dssp ETTEE---EEEEEESCT--TSCEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHH
T ss_pred eCCEE---EEEEEeCCC--CCCeEEEECCCCCchHHHHHHHHHHhhCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 34544 467667751 124999999999999999999999988899999999999998 588999999999
Q ss_pred HHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCc-CCcC-----Cch---hHHhhchhHHHHhH
Q 004396 232 VRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGR-SQLQ-----PLF---PILKAMPDELHCAV 302 (756)
Q Consensus 232 i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~-~~~~-----~~~---~~~~~~~~~~~~~~ 302 (756)
+++++.. +++||||||||.+|+.+|.++|++|+++|++++...... .... ... ........... .
T Consensus 89 l~~l~~~----~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 162 (316)
T 3afi_E 89 IEQRGVT----SAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFR--T 162 (316)
T ss_dssp HHHTTCC----SEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHT--S
T ss_pred HHHcCCC----CEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHhc--C
Confidence 9997765 899999999999999999999999999999997432100 0000 000 00000000000 0
Q ss_pred HhHhhhhcCChhHHHHHh----hhcCCChHHHHHHHHhhhhh--hhhhhhhhhccCChh-hHHHHHHHHHHHHHHHhhhc
Q 004396 303 PYLLSYVMGDPIKMAMVN----IENRLPPRIKLEQLSNNLPA--LLPRLSVMSDIIPKD-TLLWKLKLLKSASAYANSRL 375 (756)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l 375 (756)
+................. ....... +....+...+.. ............... ......... ......+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l 237 (316)
T 3afi_E 163 PGEGEAMILEANAFVERVLPGGIVRKLGD-EEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEAL----QSAHAAL 237 (316)
T ss_dssp TTHHHHHHTTSCHHHHTTTGGGCSSCCCH-HHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHH----HHHHHHH
T ss_pred CchhhHHHhccchHHHHhcccccCCCCCH-HHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHH----HHHHHhh
Confidence 000000000000000000 0000110 111111110000 000000000000000 000000011 1123556
Q ss_pred cCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 376 ~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.++++|+|+|+|++|.+++.+. .+.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 238 ~~i~~P~Lvi~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~~~GH~~~~e~p~~~~~~i~~ 296 (316)
T 3afi_E 238 AASSYPKLLFTGEPGALVSPEF-AERFAASLTRCALIRLGAGLHYLQEDHADAIGRSVAG 296 (316)
T ss_dssp HHCCSCEEEEEEEECSSSCHHH-HHHHHHHSSSEEEEEEEEECSCHHHHHHHHHHHHHHH
T ss_pred hccCCCeEEEecCCCCccCHHH-HHHHHHhCCCCeEEEcCCCCCCchhhCHHHHHHHHHH
Confidence 7899999999999999999985 9999999999999999999999999999999999983
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-25 Score=232.91 Aligned_cols=240 Identities=11% Similarity=0.081 Sum_probs=156.7
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhcc
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHAS 238 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~ 238 (756)
++|...|+ +++|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.+++++++..
T Consensus 15 l~y~~~g~----g~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~~l~~l~~~ 90 (277)
T 1brt_A 15 LYYEDHGT----GQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQ 90 (277)
T ss_dssp EEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEcCC----CCeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhCCC
Confidence 46666665 5679999999999999999999995 5799999999999998 5889999999999998765
Q ss_pred CCCCCEEEEEeChhhHHHHHHHHhCCC-cceEEEEeCCCCcCCcCCcCC-----chhHHhhchhHHHH----hHHhHhhh
Q 004396 239 SPEKPIYLVGDSFGGCLALAVAARNPT-IDLILILSNPATSFGRSQLQP-----LFPILKAMPDELHC----AVPYLLSY 308 (756)
Q Consensus 239 ~~~~~v~LvGhS~GG~vAl~~A~~~P~-~v~~lVLi~p~~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~~~~~ 308 (756)
+++|+||||||.+|+.+|.++|+ +|+++|++++........... .......+...... ........
T Consensus 91 ----~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (277)
T 1brt_A 91 ----DAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFND 166 (277)
T ss_dssp ----SEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred ----ceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHHH
Confidence 89999999999999999999998 999999999854321111000 00011100000000 00000000
Q ss_pred hcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeC
Q 004396 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG 388 (756)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~ 388 (756)
.+... ........ .+....+...... . ........+.....+....+.++++|+|+|+|+
T Consensus 167 ~~~~~-----~~~~~~~~-~~~~~~~~~~~~~-----------~---~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 226 (277)
T 1brt_A 167 FYNLD-----ENLGTRIS-EEAVRNSWNTAAS-----------G---GFFAAAAAPTTWYTDFRADIPRIDVPALILHGT 226 (277)
T ss_dssp HTTHH-----HHBTTTBC-HHHHHHHHHHHHH-----------S---CHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEET
T ss_pred Hhhcc-----ccccccCC-HHHHHHHHHHHhc-----------c---chHHHHHHHHHHhccchhhcccCCCCeEEEecC
Confidence 00000 00000000 0001111100000 0 000000000000011124678899999999999
Q ss_pred CCCCCCCHHHH-HHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 389 KDNMLPSEDEA-KRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 389 ~D~~vp~~~~~-~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+|.++|.+. + +.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 227 ~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 273 (277)
T 1brt_A 227 GDRTLPIEN-TARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLA 273 (277)
T ss_dssp TCSSSCGGG-THHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred CCccCChHH-HHHHHHHHCCCCcEEEeCCCCcchhhhCHHHHHHHHHH
Confidence 999999885 6 899999999999999999999999999999999873
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-25 Score=233.38 Aligned_cols=241 Identities=10% Similarity=0.064 Sum_probs=156.0
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhcc
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHAS 238 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~ 238 (756)
++|.+.|+ +++|||+||++++...|..+++.| +++|+|+++|+||||.| +++++++|+.++++.++..
T Consensus 19 l~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~~~ 94 (281)
T 3fob_A 19 IYYEDHGT----GKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDLHQLLEQLELQ 94 (281)
T ss_dssp EEEEEESS----SEEEEEECCTTCCGGGGTTTHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHTTCC
T ss_pred EEEEECCC----CCeEEEECCCCCcHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCccccCHHHHHHHHHHHHHHcCCC
Confidence 57777776 678999999999999999999999 56899999999999998 4889999999999997765
Q ss_pred CCCCCEEEEEeChhhHHHHHHHHhC-CCcceEEEEeCCCCcCCcCC--cCC--ch-hHHhhchhHHH----HhHHhHhhh
Q 004396 239 SPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQ--LQP--LF-PILKAMPDELH----CAVPYLLSY 308 (756)
Q Consensus 239 ~~~~~v~LvGhS~GG~vAl~~A~~~-P~~v~~lVLi~p~~~~~~~~--~~~--~~-~~~~~~~~~~~----~~~~~~~~~ 308 (756)
+++|+||||||.+++.+++.+ |++++++|++++........ ... .. .....+..... .....+...
T Consensus 95 ----~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (281)
T 3fob_A 95 ----NVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTKG 170 (281)
T ss_dssp ----SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----cEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHHHH
Confidence 899999999999888777664 89999999998754221110 000 00 01111110000 000000000
Q ss_pred hcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeC
Q 004396 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG 388 (756)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~ 388 (756)
+..... ....... ........ ................+. ..+....+.++++|+|+|+|+
T Consensus 171 ~~~~~~------~~~~~~~-~~~~~~~~-----------~~~~~~~~~~~~~~~~~~--~~d~~~~l~~i~~P~Lii~G~ 230 (281)
T 3fob_A 171 FFAAGD------RTDLVSE-SFRLYNWD-----------IAAGASPKGTLDCITAFS--KTDFRKDLEKFNIPTLIIHGD 230 (281)
T ss_dssp HTCBTT------BCCSSCH-HHHHHHHH-----------HHHTSCHHHHHHHHHHHH--HCCCHHHHTTCCSCEEEEEET
T ss_pred hccccc------ccccchH-HHHHHhhh-----------hhcccChHHHHHHHHHcc--ccchhhhhhhcCCCEEEEecC
Confidence 000000 0000000 00000000 000001111111111110 111235678999999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 389 KDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 389 ~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+|.++|.+...+.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 231 ~D~~~p~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 277 (281)
T 3fob_A 231 SDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEALLL 277 (281)
T ss_dssp TCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHhCCCceEEEeCCCCCchhhhhHHHHHHHHHH
Confidence 99999998423777889999999999999999999999999999983
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-25 Score=231.13 Aligned_cols=247 Identities=15% Similarity=0.124 Sum_probs=159.5
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCC---CchhhHHHhHhhhcCCcEEEEeccCCCCCC--------ChhHH-
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGID---GLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGL- 224 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~---~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~~- 224 (756)
+..+|.. ++|...|. ++.|+|||+||++ ++...|..+++.|+++|+|+++|+||||.| +++++
T Consensus 12 ~~~~g~~---l~y~~~g~--~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 86 (285)
T 1c4x_A 12 FPSGTLA---SHALVAGD--PQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWV 86 (285)
T ss_dssp ECCTTSC---EEEEEESC--TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHHH
T ss_pred EEECCEE---EEEEecCC--CCCCEEEEEeCCCCCCcchhhHHHHHHHHhhCcEEEEecCCCCCCCCCCCCcccchhhhh
Confidence 3445655 46666673 1345599999998 778899999999987899999999999988 46788
Q ss_pred ---HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCC-chhHHhhchhHHHH
Q 004396 225 ---VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP-LFPILKAMPDELHC 300 (756)
Q Consensus 225 ---a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~-~~~~~~~~~~~~~~ 300 (756)
++|+.+++++++.. +++|+||||||.+|+.+|.++|++++++|++++...... .... ..............
T Consensus 87 ~~~~~dl~~~l~~l~~~----~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 161 (285)
T 1c4x_A 87 GMRVEQILGLMNHFGIE----KSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMN-ARPPELARLLAFYADPRLT 161 (285)
T ss_dssp HHHHHHHHHHHHHHTCS----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCS-SCCHHHHHHHTGGGSCCHH
T ss_pred hhHHHHHHHHHHHhCCC----ccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCC-ccchhHHHHHHHhccccHH
Confidence 99999999997754 899999999999999999999999999999998653211 1000 00000000000000
Q ss_pred hHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH------HHHHhhh
Q 004396 301 AVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA------SAYANSR 374 (756)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 374 (756)
.....+.....++... ....+......... ............+... .......
T Consensus 162 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (285)
T 1c4x_A 162 PYRELIHSFVYDPENF--------PGMEEIVKSRFEVA-------------NDPEVRRIQEVMFESMKAGMESLVIPPAT 220 (285)
T ss_dssp HHHHHHHTTSSCSTTC--------TTHHHHHHHHHHHH-------------HCHHHHHHHHHHHHHHSSCCGGGCCCHHH
T ss_pred HHHHHHHHhhcCcccc--------cCcHHHHHHHHHhc-------------cCHHHHHHHHHHhccccccccccccchhh
Confidence 0111111111111000 00000111100000 0000111111111000 0001145
Q ss_pred ccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 375 LHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 375 l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+.++++|+|+|+|++|.++|.+. ++.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 221 l~~i~~P~lii~G~~D~~~p~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 280 (285)
T 1c4x_A 221 LGRLPHDVLVFHGRQDRIVPLDT-SLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLME 280 (285)
T ss_dssp HTTCCSCEEEEEETTCSSSCTHH-HHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHHH
T ss_pred hccCCCCEEEEEeCCCeeeCHHH-HHHHHHhCCCceEEEeCCCCcchhhcCHHHHHHHHHH
Confidence 68899999999999999999995 8999999999999999999999999999999999873
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=232.46 Aligned_cols=254 Identities=13% Similarity=0.066 Sum_probs=158.6
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC-------ChhHHHHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFV 228 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S-------s~~~~a~dv 228 (756)
...||.. ++|...|.+ ++|+|||+||++++...|..+++.|+ +||+|+++|+||||.| +++++++|+
T Consensus 5 ~~~~g~~---l~y~~~g~~--~~~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d~ 79 (276)
T 1zoi_A 5 TTKDGVQ---IFYKDWGPR--DAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGHDMDHYADDV 79 (276)
T ss_dssp ECTTSCE---EEEEEESCT--TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred ECCCCcE---EEEEecCCC--CCCeEEEECCCCcchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCHHHHHHHH
Confidence 3456655 466666642 36899999999999999999999995 5799999999999998 488999999
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC-CCcceEEEEeCCCCcCCcCC--cC-Cc-hhHHhhchhHHHHhHH
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQ--LQ-PL-FPILKAMPDELHCAVP 303 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~-P~~v~~lVLi~p~~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~ 303 (756)
.+++++++.. +++|+||||||.+|+.+|+++ |++|+++|++++........ .. .. ......+.........
T Consensus 80 ~~~l~~l~~~----~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (276)
T 1zoi_A 80 AAVVAHLGIQ----GAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRA 155 (276)
T ss_dssp HHHHHHHTCT----TCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHhCCC----ceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHHHhHH
Confidence 9999998765 899999999999999988887 99999999999754221110 00 00 0011100000000000
Q ss_pred hHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHH-HHHhhhccCCCCcE
Q 004396 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS-AYANSRLHAVKAEV 382 (756)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pv 382 (756)
..+......... .......... ......+..... ..........+.... .+..+.+.++++|+
T Consensus 156 ~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 219 (276)
T 1zoi_A 156 QFYRDVPAGPFY-GYNRPGVEAS-EGIIGNWWRQGM--------------IGSAKAHYDGIVAFSQTDFTEDLKGIQQPV 219 (276)
T ss_dssp HHHHHHHHTTTT-TTTSTTCCCC-HHHHHHHHHHHH--------------HSCHHHHHHHHHHHHSCCCHHHHHHCCSCE
T ss_pred HHHHHhhhcccc-cccccccccc-HHHHHHHHhhhh--------------hhhHHHHHHHHHHhcccchhhhccccCCCE
Confidence 000000000000 0000000000 000111100000 000000001111100 01124567899999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 383 LVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 383 LvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|+|+|++|.++|.+...+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 220 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 272 (276)
T 1zoi_A 220 LVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTHADVINADLLA 272 (276)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred EEEEcCCCcccChHHHHHHHHhhCCCceEEEcCCCCCchhhhCHHHHHHHHHH
Confidence 99999999999987325667788999999999999999999999999999873
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-25 Score=234.55 Aligned_cols=238 Identities=14% Similarity=0.135 Sum_probs=155.4
Q ss_pred eccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----------ChhHHHHHHHHHHHHhhc
Q 004396 169 PVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVEETVRREHA 237 (756)
Q Consensus 169 ~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----------s~~~~a~dv~~~i~~l~~ 237 (756)
|...|+ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.++.
T Consensus 13 ~~~~G~---g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~ 89 (271)
T 1wom_A 13 VKVKGS---GKASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDL 89 (271)
T ss_dssp CEEEEC---CSSEEEEECCTTCCGGGGTTTGGGGTTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHTTC
T ss_pred eEeecC---CCCcEEEEcCCCCchhhHHHHHHHHHhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHcCC
Confidence 334454 358999999999999999999999988899999999999987 356889999999998765
Q ss_pred cCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCC--cC-Cch-hHHhhchhHHHHhHHhHhhhhcCCh
Q 004396 238 SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQ--LQ-PLF-PILKAMPDELHCAVPYLLSYVMGDP 313 (756)
Q Consensus 238 ~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~--~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (756)
. +++|+||||||.+|+.+|.++|++|+++|++++........ +. ... .....+..........+....
T Consensus 90 ~----~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 161 (271)
T 1wom_A 90 K----ETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVF---- 161 (271)
T ss_dssp S----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHH----
T ss_pred C----CeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHH----
Confidence 4 89999999999999999999999999999999864321111 00 000 000000000000000000000
Q ss_pred hHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCC
Q 004396 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNML 393 (756)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~v 393 (756)
.. ............+.+...+.. ............. ...+....+.++++|+|+|+|++|.++
T Consensus 162 ---~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~l~~i~~P~lvi~G~~D~~~ 224 (271)
T 1wom_A 162 ---AA-TVLNQPDRPEIKEELESRFCS-----------TDPVIARQFAKAA--FFSDHREDLSKVTVPSLILQCADDIIA 224 (271)
T ss_dssp ---HH-HHHCCTTCHHHHHHHHHHHHH-----------SCHHHHHHHHHHH--HSCCCHHHHTTCCSCEEEEEEETCSSS
T ss_pred ---HH-HHhcCCCchHHHHHHHHHHhc-----------CCcHHHHHHHHHH--hCcchHHhccccCCCEEEEEcCCCCcC
Confidence 00 000000000111111111100 0111111000000 001112467889999999999999999
Q ss_pred CCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 394 PSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 394 p~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|.+. .+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 225 ~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 265 (271)
T 1wom_A 225 PATV-GKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLIGD 265 (271)
T ss_dssp CHHH-HHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHHHH
T ss_pred CHHH-HHHHHHHCCCCEEEEeCCCCcCccccCHHHHHHHHHH
Confidence 9985 8999999999999999999999999999999999973
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.2e-25 Score=227.77 Aligned_cols=247 Identities=11% Similarity=0.103 Sum_probs=157.7
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC-------ChhHHHHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFV 228 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S-------s~~~~a~dv 228 (756)
.+.||.. ++|...|+ +|+|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++|+
T Consensus 4 ~~~~g~~---l~y~~~g~----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 76 (274)
T 1a8q_A 4 TTRDGVE---IFYKDWGQ----GRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDL 76 (274)
T ss_dssp ECTTSCE---EEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred EccCCCE---EEEEecCC----CceEEEECCCcchHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCcHHHHHHHH
Confidence 3456655 46666665 6889999999999999999999994 5799999999999998 478999999
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC-CCcceEEEEeCCCCcCCcCC--cC-Cc-hhHHhhchhHHHHhHH
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQ--LQ-PL-FPILKAMPDELHCAVP 303 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~-P~~v~~lVLi~p~~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~ 303 (756)
.+++++++.. +++|+||||||.+|+.+|+++ |++|+++|++++........ .. .. ......+.........
T Consensus 77 ~~~l~~l~~~----~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (274)
T 1a8q_A 77 NDLLTDLDLR----DVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERS 152 (274)
T ss_dssp HHHHHHTTCC----SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCC----ceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhhccHH
Confidence 9999997654 899999999999999988776 99999999999754221110 00 00 0011111000000000
Q ss_pred hHhh----hhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHH-HHHhhhccCC
Q 004396 304 YLLS----YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS-AYANSRLHAV 378 (756)
Q Consensus 304 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i 378 (756)
..+. ...... ....... ......+.... . ..........+.... .+....+.++
T Consensus 153 ~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~~~~~~l~~i 211 (274)
T 1a8q_A 153 QFWKDTAEGFFSAN------RPGNKVT-QGNKDAFWYMA-------------M-AQTIEGGVRCVDAFGYTDFTEDLKKF 211 (274)
T ss_dssp HHHHHHHHHHTTTT------STTCCCC-HHHHHHHHHHH-------------T-TSCHHHHHHHHHHHHHCCCHHHHTTC
T ss_pred HHHHHhcccccccc------ccccccc-HHHHHHHHHHh-------------h-hcChHHHHHHHhhhhcCcHHHHhhcC
Confidence 0000 000000 0000000 00011110000 0 000111111111111 1123567889
Q ss_pred CCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCccccc--chhhHHHHhhh
Q 004396 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLE--EGISLLTIIKG 435 (756)
Q Consensus 379 ~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e--~p~~~~~~I~~ 435 (756)
++|+|+|+|++|.++|.+...+.+.+.++++++++++++||++++| +|+++++.|.+
T Consensus 212 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~ 270 (274)
T 1a8q_A 212 DIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLE 270 (274)
T ss_dssp CSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHH
T ss_pred CCCEEEEecCcCCCCCcHHHHHHHHhhCCCceEEEECCCCCceecccCCHHHHHHHHHH
Confidence 9999999999999999873246677888999999999999999999 99999999873
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-25 Score=229.45 Aligned_cols=254 Identities=14% Similarity=0.083 Sum_probs=158.1
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC-------ChhHHHHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFV 228 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S-------s~~~~a~dv 228 (756)
.+.||.. ++|...|. +++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+
T Consensus 4 ~~~~g~~---l~y~~~g~--~~~~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 78 (275)
T 1a88_A 4 TTSDGTN---IFYKDWGP--RDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADV 78 (275)
T ss_dssp ECTTSCE---EEEEEESC--TTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred EccCCCE---EEEEEcCC--CCCceEEEECCCCCchhhHHHHHHHHHHCCceEEEEcCCcCCCCCCCCCCCCHHHHHHHH
Confidence 4456655 46666664 246899999999999999999999994 5799999999999998 488999999
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC-CCcceEEEEeCCCCcCCcCC--cC-Cc-hhHHhhchhHHHHhHH
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQ--LQ-PL-FPILKAMPDELHCAVP 303 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~-P~~v~~lVLi~p~~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~ 303 (756)
.+++++++.. +++|+||||||.+|+.+|+++ |++|+++|++++........ .. .. ......+.........
T Consensus 79 ~~~l~~l~~~----~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (275)
T 1a88_A 79 AALTEALDLR----GAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRA 154 (275)
T ss_dssp HHHHHHHTCC----SEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHcCCC----ceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHhhhHH
Confidence 9999998765 899999999999999988886 99999999999754221110 00 00 0011100000000000
Q ss_pred hHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHH-HHHhhhccCCCCcE
Q 004396 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS-AYANSRLHAVKAEV 382 (756)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pv 382 (756)
..+......... .......... ......+..... ..........+.... .+....+.++++|+
T Consensus 155 ~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 218 (275)
T 1a88_A 155 QFYIDVPSGPFY-GFNREGATVS-QGLIDHWWLQGM--------------MGAANAHYECIAAFSETDFTDDLKRIDVPV 218 (275)
T ss_dssp HHHHHHHHTTTT-TTTSTTCCCC-HHHHHHHHHHHH--------------HSCHHHHHHHHHHHHHCCCHHHHHHCCSCE
T ss_pred HHHHhhhccccc-cccCcccccC-HHHHHHHHHHhh--------------hcchHhHHHHHhhhhhcccccccccCCCCE
Confidence 000000000000 0000000000 001111100000 000000111111110 01124567899999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 383 LVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 383 LvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|+|+|++|.++|.+...+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 219 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 271 (275)
T 1a88_A 219 LVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLA 271 (275)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHH
T ss_pred EEEecCCCccCCcHHHHHHHHhhCCCcEEEEcCCCCccHHHhCHHHHHHHHHH
Confidence 99999999999987324667788899999999999999999999999999873
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=229.31 Aligned_cols=252 Identities=12% Similarity=0.059 Sum_probs=157.5
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC-------ChhHHHHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFV 228 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S-------s~~~~a~dv 228 (756)
.+.+|.. ++|...|+ +|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+
T Consensus 4 ~~~~g~~---l~y~~~g~----~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 76 (273)
T 1a8s_A 4 TTRDGTQ---IYYKDWGS----GQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDL 76 (273)
T ss_dssp ECTTSCE---EEEEEESC----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred ecCCCcE---EEEEEcCC----CCEEEEECCCCCcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHH
Confidence 3456655 46666665 6889999999999999999999994 5799999999999998 488999999
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC-CCcceEEEEeCCCCcCCcCC--cC-Cc-hhHHhhchhHHHHhHH
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQ--LQ-PL-FPILKAMPDELHCAVP 303 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~-P~~v~~lVLi~p~~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~ 303 (756)
.+++++++.. +++|+||||||.+|+.+|+++ |++++++|++++........ .. .. ......+.........
T Consensus 77 ~~~l~~l~~~----~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T 1a8s_A 77 AQLIEHLDLR----DAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRS 152 (273)
T ss_dssp HHHHHHTTCC----SEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCC----CeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHhhHH
Confidence 9999997654 899999999999999988776 99999999999754221110 00 00 0011111000000000
Q ss_pred hHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHH-HHHhhhccCCCCcE
Q 004396 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS-AYANSRLHAVKAEV 382 (756)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pv 382 (756)
..+......... .......... ......+.... . ..........+.... .+....+.++++|+
T Consensus 153 ~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 216 (273)
T 1a8s_A 153 QLYKDLASGPFF-GFNQPGAKSS-AGMVDWFWLQG---------M-----AAGHKNAYDCIKAFSETDFTEDLKKIDVPT 216 (273)
T ss_dssp HHHHHHHHTTSS-STTSTTCCCC-HHHHHHHHHHH---------H-----HSCHHHHHHHHHHHHHCCCHHHHHTCCSCE
T ss_pred HHHHHhhccccc-CcCCcccccC-HHHHHHHHHhc---------c-----ccchhHHHHHHHHHhccChhhhhhcCCCCE
Confidence 000000000000 0000000000 00011110000 0 000001111111110 01124578899999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 383 LVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 383 LvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|+|+|++|.++|.+...+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 217 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 269 (273)
T 1a8s_A 217 LVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLA 269 (273)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHH
T ss_pred EEEECCCCccCChHHHHHHHHHhCCCcEEEEeCCCCCcchhhCHHHHHHHHHH
Confidence 99999999999987325667788899999999999999999999999999873
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=239.22 Aligned_cols=247 Identities=17% Similarity=0.098 Sum_probs=155.4
Q ss_pred eeeccCCCCCCC-CCEEEEECCCCCchhhHHHhHhhhcC-CcEEEEeccCCCCCC---------ChhHHHHHHHHHHHHh
Q 004396 167 FCPVDCGRPLKG-SPTLLFLPGIDGLGLGLILHHKPLGK-AFEVRCLHIPVYDRT---------PFEGLVKFVEETVRRE 235 (756)
Q Consensus 167 ~~~~~~G~~~~~-~p~lV~lHG~~~s~~~~~~~~~~L~~-gy~Vi~~Dl~G~G~S---------s~~~~a~dv~~~i~~l 235 (756)
++|.+.|.+ + +|+|||+||++++...|..+++.|++ +|+|+++|+||||.| +++++++|+.++++++
T Consensus 36 l~y~~~G~~--~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~y~~~~~a~dl~~ll~~l 113 (310)
T 1b6g_A 36 AHYLDEGNS--DAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERL 113 (310)
T ss_dssp EEEEEEECT--TCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCC--CCCCEEEEECCCCCchhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHHHc
Confidence 577777642 3 68999999999999999999999965 599999999999998 4778999999999998
Q ss_pred hccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChh-
Q 004396 236 HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPI- 314 (756)
Q Consensus 236 ~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 314 (756)
+.. +++||||||||.+|+.+|.++|++|+++|++++...................+.... .+.........-..
T Consensus 114 ~~~----~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 188 (310)
T 1b6g_A 114 DLR----NITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFT-AWKYDLVTPSDLRLD 188 (310)
T ss_dssp TCC----SEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHH-HHHHHHHSCSSCCHH
T ss_pred CCC----CEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHH-HHHHHhccCchhhhh
Confidence 876 899999999999999999999999999999998542101000000000000000000 00000000000000
Q ss_pred HHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHH-------HHHHHHHhhhcc-CCCCcEEEEE
Q 004396 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLL-------KSASAYANSRLH-AVKAEVLVLA 386 (756)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~-~i~~PvLvI~ 386 (756)
....... ..... +....+...+... ............+ ..........+. +|++|+|+|+
T Consensus 189 ~~~~~~~-~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~ 256 (310)
T 1b6g_A 189 QFMKRWA-PTLTE-AEASAYAAPFPDT----------SYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAI 256 (310)
T ss_dssp HHHHHHS-TTCCH-HHHHHHHTTCSSG----------GGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred hHHhhcC-CCCCH-HHHHHHhcccCCc----------cchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCceEEEe
Confidence 0000000 00110 0111111100000 0000000000000 000112235677 8999999999
Q ss_pred eCCCCCCCCHHHHHHHHHhCCCeEEEEE--cCCCCcccccchhhHHHHhhh
Q 004396 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNF--KDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 387 G~~D~~vp~~~~~~~l~~~l~~~~l~~i--~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|++|.+++ +. .+.+.+.+|+++++++ +++||++++ +|+++++.|.+
T Consensus 257 G~~D~~~~-~~-~~~~~~~ip~~~~~~i~~~~~GH~~~~-~p~~~~~~i~~ 304 (310)
T 1b6g_A 257 GMKDKLLG-PD-VMYPMKALINGCPEPLEIADAGHFVQE-FGEQVAREALK 304 (310)
T ss_dssp ETTCSSSS-HH-HHHHHHHHSTTCCCCEEETTCCSCGGG-GHHHHHHHHHH
T ss_pred ccCcchhh-hH-HHHHHHhcccccceeeecCCcccchhh-ChHHHHHHHHH
Confidence 99999999 74 8999999999999888 999999999 99999999983
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=230.70 Aligned_cols=241 Identities=19% Similarity=0.208 Sum_probs=155.9
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhcc
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHAS 238 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~ 238 (756)
++|.+.|+ +++|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.+++++++..
T Consensus 8 ~~y~~~G~----g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~ 83 (269)
T 2xmz_A 8 FYEANVET----NQVLVFLHGFLSDSRTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDKYKDK 83 (269)
T ss_dssp EECCSSCC----SEEEEEECCTTCCGGGGTTTHHHHHTTSEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHHHGGGTTS
T ss_pred EEEEEcCC----CCeEEEEcCCCCcHHHHHHHHHHHhhcCeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHcCCC
Confidence 56777776 56899999999999999999999987899999999999987 4788999999999987654
Q ss_pred CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHH----HhHHhHhhhhcCChh
Q 004396 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH----CAVPYLLSYVMGDPI 314 (756)
Q Consensus 239 ~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 314 (756)
+++|+||||||.+|+.+|.++|++|+++|++++......... ...... ....... ......+..+...+.
T Consensus 84 ----~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (269)
T 2xmz_A 84 ----SITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEAN-QLERRL-VDDARAKVLDIAGIELFVNDWEKLPL 157 (269)
T ss_dssp ----EEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHH-HHHHHH-HHHHHHHHHHHHCHHHHHHHHTTSGG
T ss_pred ----cEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchh-HHHHhh-hhhHHHHhhccccHHHHHHHHHhCcc
Confidence 899999999999999999999999999999998553311100 000000 0000000 000000000100000
Q ss_pred HHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH-HHHHHhhhccCCCCcEEEEEeCCCCCC
Q 004396 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS-ASAYANSRLHAVKAEVLVLASGKDNML 393 (756)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLvI~G~~D~~v 393 (756)
. ........ ...+.+..... .............+.. ......+.+.++++|+|+|+|++|.++
T Consensus 158 ~----~~~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 221 (269)
T 2xmz_A 158 F----QSQLELPV-EIQHQIRQQRL-----------SQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKF 221 (269)
T ss_dssp G----GGGGGSCH-HHHHHHHHHHH-----------TSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHH
T ss_pred c----cccccCCH-HHHHHHHHHHh-----------ccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCccc
Confidence 0 00000000 00111110000 0011111111100000 000113567889999999999999999
Q ss_pred CCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 394 PSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 394 p~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+.+. .+ +.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 222 ~~~~-~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 261 (269)
T 2xmz_A 222 VQIA-KK-MANLIPNSKCKLISATGHTIHVEDSDEFDTMILG 261 (269)
T ss_dssp HHHH-HH-HHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred CHHH-HH-HHhhCCCcEEEEeCCCCCChhhcCHHHHHHHHHH
Confidence 8874 54 8889999999999999999999999999999983
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-25 Score=231.64 Aligned_cols=263 Identities=15% Similarity=0.125 Sum_probs=166.6
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFV 228 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv 228 (756)
++..+|.. ++|...|+ +++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+
T Consensus 14 ~~~~~g~~---l~~~~~g~--~~~~~vl~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 88 (299)
T 3g9x_A 14 YVEVLGER---MHYVDVGP--RDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRYL 88 (299)
T ss_dssp EEEETTEE---EEEEEESC--SSSCCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCCCCCCHHHHHHHH
T ss_pred eeeeCCeE---EEEEecCC--CCCCEEEEECCCCccHHHHHHHHHHHccCCEEEeeCCCCCCCCCCCCCcccHHHHHHHH
Confidence 34446655 45666665 2578999999999999999999999988999999999999988 589999999
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCC-cCCch-hHHhhchhHHHHhHHhHh
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQ-LQPLF-PILKAMPDELHCAVPYLL 306 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 306 (756)
.+++++++.. +++|+||||||.+|+.+|.++|++++++|++++........ +.... .....+... ....
T Consensus 89 ~~~~~~~~~~----~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-- 159 (299)
T 3g9x_A 89 DAFIEALGLE----EVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTA---DVGR-- 159 (299)
T ss_dssp HHHHHHTTCC----SEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSS---SHHH--
T ss_pred HHHHHHhCCC----cEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCC---Ccch--
Confidence 9999997554 89999999999999999999999999999999654332111 11110 111100000 0000
Q ss_pred hhhcCChhHHHH----HhhhcCCChHHHHHHHHhhhhhhh--hhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCC
Q 004396 307 SYVMGDPIKMAM----VNIENRLPPRIKLEQLSNNLPALL--PRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKA 380 (756)
Q Consensus 307 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 380 (756)
........... ......... .....+...+.... ................. ............+.++++
T Consensus 160 -~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~i~~ 234 (299)
T 3g9x_A 160 -ELIIDQNAFIEGALPKCVVRPLTE-VEMDHYREPFLKPVDREPLWRFPNELPIAGEPA---NIVALVEAYMNWLHQSPV 234 (299)
T ss_dssp -HHHTTSCHHHHTHHHHTCSSCCCH-HHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSH---HHHHHHHHHHHHHHHCCS
T ss_pred -hhhccchhhHHHhhhhhhccCCCH-HHHHHHHHHhccccccchhhhhhhhhhhccccc---hhhhhhhhhhhhcccCCC
Confidence 00000000000 000001110 11111111000000 00000000000000000 011111123356788999
Q ss_pred cEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhccc
Q 004396 381 EVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCK 438 (756)
Q Consensus 381 PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f 438 (756)
|+|+|+|++|.+++.+. .+.+.+.++++++++++++||++++|+|+++++.|.+..+
T Consensus 235 P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~ 291 (299)
T 3g9x_A 235 PKLLFWGTPGVLIPPAE-AARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLP 291 (299)
T ss_dssp CEEEEEEEECSSSCHHH-HHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHHHHSG
T ss_pred CeEEEecCCCCCCCHHH-HHHHHhhCCCCeEEEeCCCCCcchhcCHHHHHHHHHHHHh
Confidence 99999999999999995 9999999999999999999999999999999999996543
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-25 Score=230.22 Aligned_cols=247 Identities=18% Similarity=0.128 Sum_probs=157.5
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchh-hHHHhHhhhcCCcEEEEeccCCCCCCC----------hhHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPLGKAFEVRCLHIPVYDRTP----------FEGLV 225 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss----------~~~~a 225 (756)
...+|.. ++|...|.+ ++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+ +++++
T Consensus 8 ~~~~g~~---l~~~~~G~~--~~~~vvllHG~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~a 82 (286)
T 2yys_A 8 VPVGEAE---LYVEDVGPV--EGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPRLFTVDALV 82 (286)
T ss_dssp EECSSCE---EEEEEESCT--TSCEEEEECCTTTCCSHHHHHHHGGGCTTSEEEEECCTTSTTSCCCCSCGGGCCHHHHH
T ss_pred EeECCEE---EEEEeecCC--CCCEEEEECCCCCcchhHHHHHHHHhcCCCEEEEECCCCCCCCCCCccCcccCcHHHHH
Confidence 3445655 466666742 4789999999999999 899999999889999999999999873 46789
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhc---hhH-HHHh
Q 004396 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAM---PDE-LHCA 301 (756)
Q Consensus 226 ~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~---~~~-~~~~ 301 (756)
+|+.++++.++.. +++|+||||||.+|+.+|.++|+ ++++|++++....... ........ +.. ....
T Consensus 83 ~dl~~ll~~l~~~----~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 153 (286)
T 2yys_A 83 EDTLLLAEALGVE----RFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWL----AARLAEAAGLAPLPDPEEN 153 (286)
T ss_dssp HHHHHHHHHTTCC----SEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHH----HHHHHHHTTCCCCSCHHHH
T ss_pred HHHHHHHHHhCCC----cEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHH----HHHHHHHhccccchhHHHH
Confidence 9999999997654 89999999999999999999999 9999999986521000 00000000 000 0000
Q ss_pred HHhHhhhhcCChhHHHHHhhhcCCChHH-HHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHH-HHHhhhccCCC
Q 004396 302 VPYLLSYVMGDPIKMAMVNIENRLPPRI-KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS-AYANSRLHAVK 379 (756)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~ 379 (756)
+...+.. ........ ... ...... ........ .............. .+.... .+....+.+++
T Consensus 154 ~~~~~~~--~~~~~~~~-~~~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i~ 218 (286)
T 2yys_A 154 LKEALKR--EEPKALFD-RLM-FPTPRGRMAYEWLAE----------GAGILGSDAPGLAF-LRNGLWRLDYTPYLTPER 218 (286)
T ss_dssp HHHHHHH--SCHHHHHH-HHH-CSSHHHHHHHHHHHH----------HTTCCCCSHHHHHH-HHTTGGGCBCGGGCCCCS
T ss_pred HHHHhcc--CChHHHHH-hhh-ccCCccccChHHHHH----------HHhhccccccchhh-cccccccCChhhhhhhcC
Confidence 0000000 00000000 000 000000 00000000 00000000111111 111000 01235678899
Q ss_pred CcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 380 ~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+|+|+|+|++|.+++.+ ++.+.+ +|++++++++++||++++|+|+++++.|.+
T Consensus 219 ~P~lvi~G~~D~~~~~~--~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 271 (286)
T 2yys_A 219 RPLYVLVGERDGTSYPY--AEEVAS-RLRAPIRVLPEAGHYLWIDAPEAFEEAFKE 271 (286)
T ss_dssp SCEEEEEETTCTTTTTT--HHHHHH-HHTCCEEEETTCCSSHHHHCHHHHHHHHHH
T ss_pred CCEEEEEeCCCCcCCHh--HHHHHh-CCCCCEEEeCCCCCCcChhhHHHHHHHHHH
Confidence 99999999999999987 788888 899999999999999999999999999984
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-25 Score=231.11 Aligned_cols=250 Identities=12% Similarity=0.089 Sum_probs=163.8
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFV 228 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv 228 (756)
++..+|.. ++|...|+ +|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+
T Consensus 14 ~~~~~g~~---l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l 86 (301)
T 3kda_A 14 YREVDGVK---LHYVKGGQ----GPLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGYSGEQVAVYL 86 (301)
T ss_dssp EEEETTEE---EEEEEEES----SSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTCCCCSSCSSHHHHHHHH
T ss_pred EEeeCCeE---EEEEEcCC----CCEEEEECCCCcchhHHHHHHHHHHhcCeEEEEcCCCCCCCCCCCCCccHHHHHHHH
Confidence 34456665 45666665 78999999999999999999999977799999999999998 588999999
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcC----------CchhHHhhc-hhH
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQ----------PLFPILKAM-PDE 297 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~----------~~~~~~~~~-~~~ 297 (756)
.+++++++.. ++++|+||||||.+|+.+|.++|++++++|++++.......... ......... +..
T Consensus 87 ~~~l~~l~~~---~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (301)
T 3kda_A 87 HKLARQFSPD---RPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRL 163 (301)
T ss_dssp HHHHHHHCSS---SCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHHHCSTTH
T ss_pred HHHHHHcCCC---ccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHhhcCcch
Confidence 9999998655 13999999999999999999999999999999986522111100 000000000 100
Q ss_pred HHH--------hHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH--
Q 004396 298 LHC--------AVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-- 367 (756)
Q Consensus 298 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 367 (756)
... ....++.....++ ..... +....+...+. ...........+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~ 220 (301)
T 3kda_A 164 AETLIAGKERFFLEHFIKSHASNT---------EVFSE-RLLDLYARSYA-------------KPHSLNASFEYYRALNE 220 (301)
T ss_dssp HHHHHTTCHHHHHHHHHHHTCSSG---------GGSCH-HHHHHHHHHHT-------------SHHHHHHHHHHHHTHHH
T ss_pred HHHHhccchHHHHHHHHHhccCCc---------ccCCH-HHHHHHHHHhc-------------cccccchHHHHHHhhcc
Confidence 000 0011111111111 00000 11111111000 011111111111111
Q ss_pred ----HHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhccccccCc
Q 004396 368 ----SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (756)
Q Consensus 368 ----~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr~~ 443 (756)
.......+.++++|+|+|+|++| ++... .+.+.+.++++++++++++||++++|+|+++++.|+ .|+.+.+
T Consensus 221 ~~~~~~~~~~~l~~i~~P~l~i~G~~D--~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~~l~~~~ 295 (301)
T 3kda_A 221 SVRQNAELAKTRLQMPTMTLAGGGAGG--MGTFQ-LEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVI--DFLSRGR 295 (301)
T ss_dssp HHHHHHHHTTSCBCSCEEEEEECSTTS--CTTHH-HHHHHTTBSSEEEEEETTCCSCHHHHTHHHHHHHHH--HHHTTSC
T ss_pred chhhcccchhhccccCcceEEEecCCC--CChhH-HHHHHhhcccCeEEEcCCCCcCchhhCHHHHHHHHH--HHHhhCc
Confidence 11112344589999999999999 66764 888999999999999999999999999999999999 4555544
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.5e-25 Score=226.26 Aligned_cols=238 Identities=14% Similarity=0.101 Sum_probs=161.0
Q ss_pred eeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----------ChhHHHHHHHHHHHHhh
Q 004396 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVEETVRREH 236 (756)
Q Consensus 168 ~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----------s~~~~a~dv~~~i~~l~ 236 (756)
+|...|+ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.++
T Consensus 12 ~~~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (269)
T 4dnp_A 12 NVRVVGS---GERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDALG 88 (269)
T ss_dssp TCEEECS---CSSEEEEECCTTCCGGGGTTTGGGGTTTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHHTT
T ss_pred hhhhcCC---CCCEEEEEeCCCCcHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHhcC
Confidence 4555565 468999999999999999999999987999999999999998 57899999999999865
Q ss_pred ccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCC-ch--hHHhhchhHHHHhHHhHhhhhcCCh
Q 004396 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP-LF--PILKAMPDELHCAVPYLLSYVMGDP 313 (756)
Q Consensus 237 ~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (756)
.+ +++|+||||||.+|+.+|.++|++++++|++++........... .. ................++...
T Consensus 89 ~~----~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 160 (269)
T 4dnp_A 89 ID----CCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGF---- 160 (269)
T ss_dssp CC----SEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHH----
T ss_pred CC----eEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHh----
Confidence 54 89999999999999999999999999999999976433222111 10 011111000000001100000
Q ss_pred hHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCC
Q 004396 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNML 393 (756)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~v 393 (756)
........ .......+...+.. ............+. ..+....+.++++|+|+|+|++|.++
T Consensus 161 ----~~~~~~~~-~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~ 222 (269)
T 4dnp_A 161 ----APLAVGAD-VPAAVREFSRTLFN-----------MRPDITLFVSRTVF--NSDMRGVLGLVKVPCHIFQTARDHSV 222 (269)
T ss_dssp ----HHHHHCSS-CHHHHHHHHHHHHH-----------SCHHHHHHHHHHHH--TCCCGGGGGGCCSCEEEEEEESBTTB
T ss_pred ----hhhhccCC-ChhHHHHHHHHHHc-----------cCcchhhhHhhhhc--chhhHhhhccccCCEEEEecCCCccc
Confidence 00000000 00111111111110 11111111111111 11123667889999999999999999
Q ss_pred CCHHHHHHHHHhCCC-eEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 394 PSEDEAKRLNNSLQN-CIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 394 p~~~~~~~l~~~l~~-~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+.+. .+.+.+.+++ +++++++++||++++|+|+++++.|.+
T Consensus 223 ~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 264 (269)
T 4dnp_A 223 PASV-ATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRR 264 (269)
T ss_dssp CHHH-HHHHHHHSSSCEEEEEEEEESSCHHHHCHHHHHHHHHH
T ss_pred CHHH-HHHHHHhCCCCceEEEeCCCCCCccccCHHHHHHHHHH
Confidence 9995 9999999998 899999999999999999999999883
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=231.11 Aligned_cols=242 Identities=12% Similarity=0.030 Sum_probs=154.1
Q ss_pred cCCCCCceeeeeccC--CCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHH
Q 004396 158 KPDGGPPRWFCPVDC--GRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFV 228 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~--G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv 228 (756)
+.+|.. ++|.+. |+ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+
T Consensus 10 ~~~g~~---l~y~~~~~G~---~~p~vvllHG~~~~~~~w~~~~~~L~~~~rvia~DlrGhG~S~~~~~~~~~~~~a~dl 83 (276)
T 2wj6_A 10 LVFDNK---LSYIDNQRDT---DGPAILLLPGWCHDHRVYKYLIQELDADFRVIVPNWRGHGLSPSEVPDFGYQEQVKDA 83 (276)
T ss_dssp EETTEE---EEEEECCCCC---SSCEEEEECCTTCCGGGGHHHHHHHTTTSCEEEECCTTCSSSCCCCCCCCHHHHHHHH
T ss_pred eeCCeE---EEEEEecCCC---CCCeEEEECCCCCcHHHHHHHHHHHhcCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 345544 577766 64 468999999999999999999999988999999999999998 588999999
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC-CCcceEEEEeCCCCcCCcCCcCCchhHHhhc--hhHHHHhHHhH
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQLQPLFPILKAM--PDELHCAVPYL 305 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~-P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 305 (756)
.+++++++.. +++||||||||.+|+.+|.++ |++|+++|++++...... .......... +..........
T Consensus 84 ~~ll~~l~~~----~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 156 (276)
T 2wj6_A 84 LEILDQLGVE----TFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPK---PDFAKSLTLLKDPERWREGTHGL 156 (276)
T ss_dssp HHHHHHHTCC----SEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCC---HHHHHHHHHHHCTTTHHHHHHHH
T ss_pred HHHHHHhCCC----ceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCC---chHHHHhhhccCcchHHHHHHHH
Confidence 9999998876 899999999999999999999 999999999997532110 0000000000 00000000000
Q ss_pred hhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHH---HHhhhccCCCCcE
Q 004396 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASA---YANSRLHAVKAEV 382 (756)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~i~~Pv 382 (756)
+..+. .........+.+..... ................... .....+..+++|+
T Consensus 157 ~~~~~------------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 213 (276)
T 2wj6_A 157 FDVWL------------DGHDEKRVRHHLLEEMA-----------DYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTR 213 (276)
T ss_dssp HHHHH------------TTBCCHHHHHHHHTTTT-----------TCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCC
T ss_pred HHHhh------------cccchHHHHHHHHHHhh-----------hcchhhhhhccchhHHHHhhccchhhHHhhcCCCc
Confidence 00000 00000001111111000 0000011110111111000 0124577899999
Q ss_pred EEEEeCCCCCCC-CHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 383 LVLASGKDNMLP-SEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 383 LvI~G~~D~~vp-~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++++|..|...+ .....+.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 214 lv~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~i~~~gH~~~~e~P~~~~~~i~~ 267 (276)
T 2wj6_A 214 PIRHIFSQPTEPEYEKINSDFAEQHPWFSYAKLGGPTHFPAIDVPDRAAVHIRE 267 (276)
T ss_dssp CEEEEECCSCSHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHSHHHHHHHHHH
T ss_pred eEEEEecCccchhHHHHHHHHHhhCCCeEEEEeCCCCCcccccCHHHHHHHHHH
Confidence 999874433322 11125778888999999999999999999999999999983
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.7e-25 Score=229.51 Aligned_cols=238 Identities=20% Similarity=0.249 Sum_probs=155.0
Q ss_pred eeeccCCCCCCCCCEEEEECCCC---CchhhHHHhH-hhhcCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHH
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGID---GLGLGLILHH-KPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRR 234 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~---~s~~~~~~~~-~~L~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~ 234 (756)
++|...|+ +.++|||+||++ ++...|..++ +.|+++|+|+++|+||||.| +++++++++.+++++
T Consensus 27 l~y~~~g~---g~~~vvllHG~~~~~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 103 (289)
T 1u2e_A 27 IHFNDCGQ---GDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVDQ 103 (289)
T ss_dssp EEEEEECC---CSSEEEEECCCSTTCCHHHHTTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHH
T ss_pred EEEeccCC---CCceEEEECCCCcccchhHHHHHhhhHHHhcCCeEEEEcCCCCCCCCCCCccccCHHHHHHHHHHHHHH
Confidence 46666665 233999999998 6777888888 88987899999999999988 367889999999998
Q ss_pred hhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCc-hhHHhhchhHHH----HhHHhHhhhh
Q 004396 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL-FPILKAMPDELH----CAVPYLLSYV 309 (756)
Q Consensus 235 l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~ 309 (756)
++.. +++|+||||||.+|+.+|.++|++++++|++++..... ...... ......+..... ......+...
T Consensus 104 l~~~----~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (289)
T 1u2e_A 104 LDIA----KIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGM-SLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIF 178 (289)
T ss_dssp TTCC----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCC-CSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTT
T ss_pred hCCC----ceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCcccc-ccccccchhhHHHHHHHHhcchHHHHHHHHHHh
Confidence 7654 89999999999999999999999999999999865311 111100 000110000000 0000111111
Q ss_pred cCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH---HHHHhhhccCCCCcEEEEE
Q 004396 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA---SAYANSRLHAVKAEVLVLA 386 (756)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~PvLvI~ 386 (756)
..++ ..... +.......... .....+......+... ..+....+.++++|+|+|+
T Consensus 179 ~~~~---------~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 236 (289)
T 1u2e_A 179 VFDT---------SDLTD-ALFEARLNNML------------SRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVW 236 (289)
T ss_dssp SSCT---------TSCCH-HHHHHHHHHHH------------HTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEE
T ss_pred hcCc---------ccCCH-HHHHHHHHHhh------------cChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEe
Confidence 0000 00000 00000000000 0001111111111000 0001256788999999999
Q ss_pred eCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 387 G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|++|.++|.+. ++.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 237 G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 284 (289)
T 1u2e_A 237 GRNDRFVPMDA-GLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVLN 284 (289)
T ss_dssp ETTCSSSCTHH-HHHHHHHSTTCEEEEESSCCSCHHHHTHHHHHHHHHH
T ss_pred eCCCCccCHHH-HHHHHhhCCCcEEEEeCCCCCchhhcCHHHHHHHHHH
Confidence 99999999995 9999999999999999999999999999999999873
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=234.38 Aligned_cols=219 Identities=17% Similarity=0.203 Sum_probs=151.6
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
++.|||+||++++...|..+++.| .+||+|+++|+||||.| +++++++|+.++++.+.... ++++|+|||
T Consensus 51 ~~~VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~~~--~~v~lvG~S 128 (281)
T 4fbl_A 51 RIGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEERC--DVLFMTGLS 128 (281)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHHHHHC--SEEEEEEET
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhCC--CeEEEEEEC
Confidence 456999999999999999999999 56899999999999999 58899999999999876442 389999999
Q ss_pred hhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHH
Q 004396 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (756)
Q Consensus 251 ~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (756)
|||.+|+.+|.++|++++++|+++|+....... ......... ....+.....+ ..
T Consensus 129 ~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~~------------~~---- 183 (281)
T 4fbl_A 129 MGGALTVWAAGQFPERFAGIMPINAALRMESPD----LAALAFNPD-----APAELPGIGSD------------IK---- 183 (281)
T ss_dssp HHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHH----HHHHHTCTT-----CCSEEECCCCC------------CS----
T ss_pred cchHHHHHHHHhCchhhhhhhcccchhcccchh----hHHHHHhHh-----hHHhhhcchhh------------hh----
Confidence 999999999999999999999999865332110 000000000 00000000000 00
Q ss_pred HHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC--C
Q 004396 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ--N 408 (756)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~--~ 408 (756)
....... .....+...+.. +..........+.+|++|+|+|+|++|.++|++. ++.+.+.++ +
T Consensus 184 -~~~~~~~---------~~~~~~~~~~~~----~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~-~~~l~~~l~~~~ 248 (281)
T 4fbl_A 184 -AEGVKEL---------AYPVTPVPAIKH----LITIGAVAEMLLPRVKCPALIIQSREDHVVPPHN-GELIYNGIGSTE 248 (281)
T ss_dssp -STTCCCC---------CCSEEEGGGHHH----HHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHH-HHHHHHHCCCSS
T ss_pred -hHHHHHh---------hhccCchHHHHH----HHHhhhhccccccccCCCEEEEEeCCCCCcCHHH-HHHHHHhCCCCC
Confidence 0000000 000011111111 1112223346789999999999999999999995 999999885 5
Q ss_pred eEEEEEcCCCCcccccc-hhhHHHHhhhcccccc
Q 004396 409 CIVRNFKDNGHTLLLEE-GISLLTIIKGTCKYRR 441 (756)
Q Consensus 409 ~~l~~i~~aGH~~~~e~-p~~~~~~I~~~~f~rr 441 (756)
+++++++++||++++|. ++.+.+.|. .|+++
T Consensus 249 ~~l~~~~~~gH~~~~e~~~e~v~~~i~--~FL~~ 280 (281)
T 4fbl_A 249 KELLWLENSYHVATLDNDKELILERSL--AFIRK 280 (281)
T ss_dssp EEEEEESSCCSCGGGSTTHHHHHHHHH--HHHHT
T ss_pred cEEEEECCCCCcCccccCHHHHHHHHH--HHHHh
Confidence 69999999999999885 888888776 45543
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-25 Score=236.32 Aligned_cols=248 Identities=15% Similarity=0.124 Sum_probs=156.8
Q ss_pred ccCCCCCceeeeeccCCCCCCC--CCEEEEECCCCCchhhHHHhHhhhc--CCcEEEEeccCCCCCC-----------Ch
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKG--SPTLLFLPGIDGLGLGLILHHKPLG--KAFEVRCLHIPVYDRT-----------PF 221 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~--~p~lV~lHG~~~s~~~~~~~~~~L~--~gy~Vi~~Dl~G~G~S-----------s~ 221 (756)
+..+|.. ++|...|....+ +++|||+||++++...|..++..|. .+|+|+++|+||||.| ++
T Consensus 33 v~~~g~~---l~y~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~~~~~~ 109 (330)
T 3nwo_A 33 VPFGDHE---TWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPADFWTP 109 (330)
T ss_dssp EEETTEE---EEEEEECCSSCCTTCCCEEEECCTTTCCSGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCGGGCCH
T ss_pred EeecCcE---EEEEEecCccCCCCCCcEEEECCCCCCchhHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCccccccH
Confidence 3445554 466666653223 3489999999999999999999996 5899999999999988 35
Q ss_pred hHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCC-chhHHhhchhHHHH
Q 004396 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP-LFPILKAMPDELHC 300 (756)
Q Consensus 222 ~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~-~~~~~~~~~~~~~~ 300 (756)
+++++|+.++++.++.. +++|+||||||.+|+.+|.++|++|.++|++++...... +.. .......++.....
T Consensus 110 ~~~a~dl~~ll~~lg~~----~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 183 (330)
T 3nwo_A 110 QLFVDEFHAVCTALGIE----RYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRL--WSEAAGDLRAQLPAETRA 183 (330)
T ss_dssp HHHHHHHHHHHHHHTCC----SEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHH--HHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCC----ceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHH--HHHHHHHHHHhcCHHHHH
Confidence 77899999999998765 899999999999999999999999999999998553210 000 00000011110000
Q ss_pred hHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHH-------HHH------
Q 004396 301 AVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLL-------KSA------ 367 (756)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~------ 367 (756)
.+..... ................+.... . .....+. .+......+ ...
T Consensus 184 ~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (330)
T 3nwo_A 184 ALDRHEA--------------AGTITHPDYLQAAAEFYRRHV---C-RVVPTPQ-DFADSVAQMEAEPTVYHTMNGPNEF 244 (330)
T ss_dssp HHHHHHH--------------HTCTTSHHHHHHHHHHHHHHT---C-CSSSCCH-HHHHHHHHHHHSCHHHHHHTCSCSS
T ss_pred HHHHHHh--------------ccCCCCHHHHHHHHHHHHHhh---c-cccCCCH-HHHHHHHhhccchhhhhcccCchhh
Confidence 0000000 000000000000000000000 0 0000000 000000000 000
Q ss_pred -------HHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 368 -------SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 368 -------~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
..+....+.+|++|+|+|+|++|.++|. ..+.+.+.+|++++++++++||++++|+|+++++.|.
T Consensus 245 ~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p~--~~~~~~~~ip~~~~~~i~~~gH~~~~e~p~~~~~~i~ 316 (330)
T 3nwo_A 245 HVVGTLGDWSVIDRLPDVTAPVLVIAGEHDEATPK--TWQPFVDHIPDVRSHVFPGTSHCTHLEKPEEFRAVVA 316 (330)
T ss_dssp SCCSGGGGCBCGGGGGGCCSCEEEEEETTCSSCHH--HHHHHHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHH
T ss_pred hhhccccCCchhhhcccCCCCeEEEeeCCCccChH--HHHHHHHhCCCCcEEEeCCCCCchhhcCHHHHHHHHH
Confidence 0011256788999999999999998764 3788999999999999999999999999999999998
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-25 Score=227.57 Aligned_cols=239 Identities=15% Similarity=0.171 Sum_probs=149.0
Q ss_pred eeeccCCCCCCCCC-EEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC------hhHHHHHHHHHHHHhhccC
Q 004396 167 FCPVDCGRPLKGSP-TLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASS 239 (756)
Q Consensus 167 ~~~~~~G~~~~~~p-~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss------~~~~a~dv~~~i~~l~~~~ 239 (756)
++|...|+ +| +|||+||++++...|..+++.|+++|+|+++|+||||.|+ ++++++++.+ .+.
T Consensus 4 l~~~~~G~----g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~---~l~--- 73 (258)
T 1m33_A 4 IWWQTKGQ----GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ---QAP--- 73 (258)
T ss_dssp CCEEEECC----CSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSCCCCCHHHHHHHHHT---TSC---
T ss_pred eEEEEecC----CCCeEEEECCCCCChHHHHHHHHHhhcCcEEEEeeCCCCCCCCCCCCcCHHHHHHHHHH---HhC---
Confidence 35666676 56 9999999999999999999999889999999999999983 5555554433 222
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcC-CcCCch-hHHhhchhHHHHhHHhHhhhhcCChhHHH
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS-QLQPLF-PILKAMPDELHCAVPYLLSYVMGDPIKMA 317 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (756)
++++|+||||||.+|+.+|.++|++|+++|++++...+... .+.... .....+...........+..+...
T Consensus 74 --~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 146 (258)
T 1m33_A 74 --DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLAL----- 146 (258)
T ss_dssp --SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred --CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHH-----
Confidence 48999999999999999999999999999999986433221 111110 001100000000000000000000
Q ss_pred HHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHH
Q 004396 318 MVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSED 397 (756)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~ 397 (756)
............+.+...+.. ........+......+.. .+....+.++++|+|+|+|++|.+++.+.
T Consensus 147 --~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~l~i~G~~D~~~~~~~ 214 (258)
T 1m33_A 147 --QTMGTETARQDARALKKTVLA--------LPMPEVDVLNGGLEILKT--VDLRQPLQNVSMPFLRLYGYLDGLVPRKV 214 (258)
T ss_dssp --TSTTSTTHHHHHHHHHHHHHT--------SCCCCHHHHHHHHHHHHH--CCCTTGGGGCCSCEEEEEETTCSSSCGGG
T ss_pred --HhcCCccchhhHHHHHHHHHh--------ccCCcHHHHHHHHHHHHh--CCHHHHHhhCCCCEEEEeecCCCCCCHHH
Confidence 000000000001111110000 000001111111111111 11235678899999999999999999884
Q ss_pred HHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 398 EAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 398 ~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 215 -~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 251 (258)
T 1m33_A 215 -VPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVA 251 (258)
T ss_dssp -CC-CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred -HHHHHHhCccceEEEeCCCCCCccccCHHHHHHHHHH
Confidence 8888888999999999999999999999999999983
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.9e-25 Score=234.91 Aligned_cols=241 Identities=16% Similarity=0.127 Sum_probs=152.9
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcC-CcEEEEeccCCCCCC---------ChhHHHHHHHHHHHHhh
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK-AFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREH 236 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~-gy~Vi~~Dl~G~G~S---------s~~~~a~dv~~~i~~l~ 236 (756)
++|.+.|.+ +++|+|||+||++++...|..+++.|++ +|+|+++|+||||.| +++++++|+.++++.++
T Consensus 35 l~y~~~G~~-~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~ll~~l~ 113 (297)
T 2xt0_A 35 MHYVDEGPR-DAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDALQ 113 (297)
T ss_dssp EEEEEESCT-TCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEccCC-CCCCeEEEECCCCCcceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhC
Confidence 567777742 1268999999999999999999999964 699999999999998 46789999999999987
Q ss_pred ccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHH
Q 004396 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM 316 (756)
Q Consensus 237 ~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (756)
.. +++||||||||.+|+.+|.++|++|+++|++++.... ..... ... ........ ..+.. .....
T Consensus 114 ~~----~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~--~~~~~-~~~-~~~~~~~~-~~~~~------~~~~~ 178 (297)
T 2xt0_A 114 LE----RVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAV--GLSPG-KGF-ESWRDFVA-NSPDL------DVGKL 178 (297)
T ss_dssp CC----SEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCS--SSCSC-HHH-HHHHHHHH-TCTTC------CHHHH
T ss_pred CC----CEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCc--ccCCc-hhH-HHHHHHhh-ccccc------chhHH
Confidence 65 8999999999999999999999999999999985411 11100 000 00000000 00000 00000
Q ss_pred HHHhhhcCCChHHHHHHHHhhhhh-----hhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhcc-CCCCcEEEEEeCCC
Q 004396 317 AMVNIENRLPPRIKLEQLSNNLPA-----LLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH-AVKAEVLVLASGKD 390 (756)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~PvLvI~G~~D 390 (756)
..... ..... +....+...+.. ....+........ ....+. ........+. ++++|+|+|+|++|
T Consensus 179 ~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~l~~~i~~P~Lvi~G~~D 249 (297)
T 2xt0_A 179 MQRAI-PGITD-AEVAAYDAPFPGPEFKAGVRRFPAIVPITP-DMEGAE------IGRQAMSFWSTQWSGPTFMAVGAQD 249 (297)
T ss_dssp HHHHS-TTCCH-HHHHHHHTTCSSGGGCHHHHHGGGGSCCST-TSTTHH------HHHHHHHHHHHTCCSCEEEEEETTC
T ss_pred HhccC-ccCCH-HHHHHHhccccCcchhHHHHHHHHhCcccc-ccchhh------HHHHHHHHhhhccCCCeEEEEeCCC
Confidence 00000 00000 001111000000 0000000000000 000000 0111235567 89999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCeEEEE--EcCCCCcccccchhhHHHHhhh
Q 004396 391 NMLPSEDEAKRLNNSLQNCIVRN--FKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 391 ~~vp~~~~~~~l~~~l~~~~l~~--i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.+++ +. .+.+.+.+|++++++ ++++||++++ +|+++++.|.+
T Consensus 250 ~~~~-~~-~~~~~~~~p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~ 293 (297)
T 2xt0_A 250 PVLG-PE-VMGMLRQAIRGCPEPMIVEAGGHFVQE-HGEPIARAALA 293 (297)
T ss_dssp SSSS-HH-HHHHHHHHSTTCCCCEEETTCCSSGGG-GCHHHHHHHHH
T ss_pred cccC-hH-HHHHHHhCCCCeeEEeccCCCCcCccc-CHHHHHHHHHH
Confidence 9999 74 899999999887765 7899999999 99999999984
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-25 Score=229.75 Aligned_cols=240 Identities=14% Similarity=0.112 Sum_probs=154.7
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhcc
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHAS 238 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~ 238 (756)
++|...|+ +++|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++++...
T Consensus 15 l~y~~~g~----~~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~~~ 90 (279)
T 1hkh_A 15 LYYEDQGS----GQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETLDLR 90 (279)
T ss_dssp EEEEEESS----SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHTCC
T ss_pred EEEEecCC----CCcEEEEcCCCchhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 45666665 5679999999999999999999994 5799999999999998 5889999999999998755
Q ss_pred CCCCCEEEEEeChhhHHHHHHHHhCCC-cceEEEEeCCCCcCCcCCcCC---c-hhHHhhchhHHH----HhHHhHhhhh
Q 004396 239 SPEKPIYLVGDSFGGCLALAVAARNPT-IDLILILSNPATSFGRSQLQP---L-FPILKAMPDELH----CAVPYLLSYV 309 (756)
Q Consensus 239 ~~~~~v~LvGhS~GG~vAl~~A~~~P~-~v~~lVLi~p~~~~~~~~~~~---~-~~~~~~~~~~~~----~~~~~~~~~~ 309 (756)
+++|+||||||.+++.+|.++|+ +|+++|++++........... . ......+..... ..........
T Consensus 91 ----~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (279)
T 1hkh_A 91 ----DVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNF 166 (279)
T ss_dssp ----SEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ----ceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhh
Confidence 89999999999999999999998 999999999854321111000 0 001100000000 0000000000
Q ss_pred cCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCC---CCcEEEEE
Q 004396 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAV---KAEVLVLA 386 (756)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---~~PvLvI~ 386 (756)
.... ......... +.......... ........ ........+....+.++ ++|+|+|+
T Consensus 167 ~~~~-----~~~~~~~~~-~~~~~~~~~~~-----------~~~~~~~~---~~~~~~~~~~~~~l~~i~~~~~P~lii~ 226 (279)
T 1hkh_A 167 YNLD-----ENLGSRISE-QAVTGSWNVAI-----------GSAPVAAY---AVVPAWIEDFRSDVEAVRAAGKPTLILH 226 (279)
T ss_dssp HTHH-----HHBTTTBCH-HHHHHHHHHHH-----------TSCTTHHH---HTHHHHTCBCHHHHHHHHHHCCCEEEEE
T ss_pred hhcc-----cCCcccccH-HHHHhhhhhhc-----------cCcHHHHH---HHHHHHhhchhhhHHHhccCCCCEEEEE
Confidence 0000 000000000 01111110000 00000000 00000000112345566 99999999
Q ss_pred eCCCCCCCCHHHH-HHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 387 SGKDNMLPSEDEA-KRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 387 G~~D~~vp~~~~~-~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|++|.++|.+. . +.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 227 G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 275 (279)
T 1hkh_A 227 GTKDNILPIDA-TARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKT 275 (279)
T ss_dssp ETTCSSSCTTT-THHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred cCCCccCChHH-HHHHHHHhCCCeeEEEeCCCCccchhcCHHHHHHHHHH
Confidence 99999999884 6 889999999999999999999999999999999874
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=223.89 Aligned_cols=261 Identities=15% Similarity=0.118 Sum_probs=174.2
Q ss_pred cccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC--------ChhHH
Q 004396 154 KEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGL 224 (756)
Q Consensus 154 ~~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S--------s~~~~ 224 (756)
..+...||..+.+..+...+. +.|+|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++
T Consensus 20 ~~~~~~~g~~l~~~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 96 (303)
T 3pe6_A 20 PHLVNADGQYLFCRYWAPTGT---PKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVF 96 (303)
T ss_dssp CEEECTTSCEEEEEEECCSSC---CSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTCCSSTHHH
T ss_pred CeEecCCCeEEEEEEeccCCC---CCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCCCCCHHHH
Confidence 356677777755544444433 47899999999999999999999994 5899999999999988 47888
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHh
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (756)
++|+.++++.+....+..+++++||||||.+|+.+|.++|++++++|+++|....... ...............
T Consensus 97 ~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~-------~~~~~~~~~~~~~~~ 169 (303)
T 3pe6_A 97 VRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPE-------SATTFKVLAAKVLNS 169 (303)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHH-------HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchh-------ccHHHHHHHHHHHHH
Confidence 9999999999887777779999999999999999999999999999999986533111 000111111111111
Q ss_pred HhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEE
Q 004396 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (756)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLv 384 (756)
.+......... .. ...........+... ...........+...... ........+.++++|+|+
T Consensus 170 ~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~ 233 (303)
T 3pe6_A 170 VLPNLSSGPID---SS--VLSRNKTEVDIYNSD----------PLICRAGLKVCFGIQLLN-AVSRVERALPKLTVPFLL 233 (303)
T ss_dssp TCCSCCCCCCC---GG--GTCSCHHHHHHHHTC----------TTSCCSCCCHHHHHHHHH-HHHHHHHHGGGCCSCEEE
T ss_pred hcccccCCccc---hh--hhhcchhHHHHhccC----------ccccccchhhhhHHHHHH-HHHHHHHHhhcCCCCEEE
Confidence 11000000000 00 000000001111100 000011111222222222 122334678899999999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhCC--CeEEEEEcCCCCcccccchhhHHHHhhhc-ccccc
Q 004396 385 LASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIKGT-CKYRR 441 (756)
Q Consensus 385 I~G~~D~~vp~~~~~~~l~~~l~--~~~l~~i~~aGH~~~~e~p~~~~~~I~~~-~f~rr 441 (756)
|+|++|.+++.+. .+.+.+.++ ++++++++++||+++.++|+.+++.+.+. .|+.+
T Consensus 234 i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~ 292 (303)
T 3pe6_A 234 LQGSADRLCDSKG-AYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQ 292 (303)
T ss_dssp EEETTCSSBCHHH-HHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred EeeCCCCCCChHH-HHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhc
Confidence 9999999999995 999999998 89999999999999999999998888766 55543
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=223.89 Aligned_cols=240 Identities=13% Similarity=0.054 Sum_probs=160.3
Q ss_pred CCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHHHHH
Q 004396 159 PDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEET 231 (756)
Q Consensus 159 ~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~ 231 (756)
.+|.. ++|...|+ +++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++
T Consensus 6 ~~g~~---l~~~~~g~--~~~~~vv~lHG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 80 (264)
T 3ibt_A 6 VNGTL---MTYSESGD--PHAPTLFLLSGWCQDHRLFKNLAPLLARDFHVICPDWRGHDAKQTDSGDFDSQTLAQDLLAF 80 (264)
T ss_dssp ETTEE---CCEEEESC--SSSCEEEEECCTTCCGGGGTTHHHHHTTTSEEEEECCTTCSTTCCCCSCCCHHHHHHHHHHH
T ss_pred eCCeE---EEEEEeCC--CCCCeEEEEcCCCCcHhHHHHHHHHHHhcCcEEEEccccCCCCCCCccccCHHHHHHHHHHH
Confidence 34554 45666665 3578999999999999999999999988899999999999988 589999999999
Q ss_pred HHHhhccCCCCCEEEEEeChhhHHHHHHHHhC-CCcceEEEEeCCCCcCCcCCcCCchhHHhhchh--HHHHhHHhHhhh
Q 004396 232 VRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQLQPLFPILKAMPD--ELHCAVPYLLSY 308 (756)
Q Consensus 232 i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~-P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 308 (756)
+++++.. +++|+||||||.+|+.+|.++ |++++++|++++.. ... ......+..... .........+..
T Consensus 81 l~~l~~~----~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (264)
T 3ibt_A 81 IDAKGIR----DFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL-QPH---PGFWQQLAEGQHPTEYVAGRQSFFDE 152 (264)
T ss_dssp HHHTTCC----SEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS-SCC---HHHHHHHHHTTCTTTHHHHHHHHHHH
T ss_pred HHhcCCC----ceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC-CcC---hhhcchhhcccChhhHHHHHHHHHHH
Confidence 9997654 899999999999999999999 99999999999866 111 111111111100 000011111111
Q ss_pred hcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHH---HhhhccCCCCcEEEE
Q 004396 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY---ANSRLHAVKAEVLVL 385 (756)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~i~~PvLvI 385 (756)
... ........+.+...+.. ............+...... ....+.++++|+|+|
T Consensus 153 ~~~------------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 209 (264)
T 3ibt_A 153 WAE------------TTDNADVLNHLRNEMPW-----------FHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEIC 209 (264)
T ss_dssp HHT------------TCCCHHHHHHHHHTGGG-----------SCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEE
T ss_pred hcc------------cCCcHHHHHHHHHhhhh-----------ccchhHHHHHHHhccchhhccchhhcccccCCCeEEE
Confidence 100 00111111111111110 1111222222222221111 226778999999999
Q ss_pred Ee--CCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 386 AS--GKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 386 ~G--~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+| +.|...+.+ ..+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 210 ~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 260 (264)
T 3ibt_A 210 HIYSQPLSQDYRQ-LQLEFAAGHSWFHPRHIPGRTHFPSLENPVAVAQAIRE 260 (264)
T ss_dssp EEECCSCCHHHHH-HHHHHHHHCTTEEEEECCCSSSCHHHHCHHHHHHHHHH
T ss_pred EecCCccchhhHH-HHHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHHH
Confidence 76 444444455 37888999999999999999999999999999999983
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=227.91 Aligned_cols=248 Identities=13% Similarity=0.187 Sum_probs=160.2
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCC---CchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGID---GLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVK 226 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~---~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~ 226 (756)
+..+|.. ++|...|+ +|+|||+||++ ++...|..+++.|++.|+|+++|+||||.| +++++++
T Consensus 21 ~~~~g~~---l~y~~~g~----g~~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 93 (296)
T 1j1i_A 21 VNAGGVE---TRYLEAGK----GQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIR 93 (296)
T ss_dssp EEETTEE---EEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHH
T ss_pred EEECCEE---EEEEecCC----CCeEEEECCCCCCcchHHHHHHHHHHHhhcCEEEEECCCCCCCCCCCCCCCCHHHHHH
Confidence 3445554 46666675 67899999998 778889999999987899999999999987 4788999
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHh
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (756)
|+.++++.+.. .++++|+||||||.+|+.+|.++|++++++|++++..... .............+.. ..+...+
T Consensus 94 dl~~~l~~l~~---~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~ 167 (296)
T 1j1i_A 94 HLHDFIKAMNF---DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVV-EIHEDLRPIINYDFTR--EGMVHLV 167 (296)
T ss_dssp HHHHHHHHSCC---SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCC-C----------CCSCH--HHHHHHH
T ss_pred HHHHHHHhcCC---CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCC-CCCchHHHHhcccCCc--hHHHHHH
Confidence 99999998754 1389999999999999999999999999999999865221 1110000000000000 0011111
Q ss_pred hhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHH--HHHhhhccCCCCcEEE
Q 004396 307 SYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS--AYANSRLHAVKAEVLV 384 (756)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~PvLv 384 (756)
.....++ .... ............. +. ....+........... ......+.++++|+|+
T Consensus 168 ~~~~~~~---------~~~~-~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Li 227 (296)
T 1j1i_A 168 KALTNDG---------FKID-DAMINSRYTYATD--EA--------TRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLV 227 (296)
T ss_dssp HHHSCTT---------CCCC-HHHHHHHHHHHHS--HH--------HHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEE
T ss_pred HHhccCc---------cccc-HHHHHHHHHHhhC--cc--------hhhHHHHHHHHHHhcccccccHHHhhcCCCCEEE
Confidence 1111111 0000 0001110000000 00 0000111111100000 0012456889999999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhccccc
Q 004396 385 LASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (756)
Q Consensus 385 I~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~r 440 (756)
|+|++|.++|.+. ++.+.+.++++++++++++||++++|+|+++++.|. .|+.
T Consensus 228 i~G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 280 (296)
T 1j1i_A 228 VQGKDDKVVPVET-AYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATL--SFLS 280 (296)
T ss_dssp EEETTCSSSCHHH-HHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHH--HHHH
T ss_pred EEECCCcccCHHH-HHHHHHHCCCCEEEEECCCCCCchhcCHHHHHHHHH--HHHh
Confidence 9999999999995 899999999999999999999999999999999998 4543
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-25 Score=228.50 Aligned_cols=249 Identities=16% Similarity=0.125 Sum_probs=163.0
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC---------ChhHHHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT---------PFEGLVKF 227 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S---------s~~~~a~d 227 (756)
+..+|+. ++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|
T Consensus 8 ~~~~~~~---~~y~~~g~----~~~vv~~HG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 80 (278)
T 3oos_A 8 IKTPRGK---FEYFLKGE----GPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKD 80 (278)
T ss_dssp EEETTEE---EEEEEECS----SSEEEECCSSEECCTTCCTTTGGGGGTSEEEEECCTTSTTSCCCSSGGGGSHHHHHHH
T ss_pred EecCCce---EEEEecCC----CCeEEEEcCCCcchHHHHHHHHHhhcCceEEEEcCCCCCCCCCCCCcccCcHHHHHHH
Confidence 3445554 46667775 78999999999999999999999988999999999999988 47889999
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch-hHHhhchhHHHHhHHhHh
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF-PILKAMPDELHCAVPYLL 306 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 306 (756)
+.+++++++.+ +++|+||||||.+++.+|.++|++++++|+++|............. ......... +...+
T Consensus 81 ~~~~~~~l~~~----~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 152 (278)
T 3oos_A 81 LEAIREALYIN----KWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNR----IVSIM 152 (278)
T ss_dssp HHHHHHHTTCS----CEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHH----HHHHH
T ss_pred HHHHHHHhCCC----eEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHH----HHHHH
Confidence 99999997554 8999999999999999999999999999999997751111100000 000000000 01111
Q ss_pred hhhcCChhH------HHH-HhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH---HHHHHhhhcc
Q 004396 307 SYVMGDPIK------MAM-VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS---ASAYANSRLH 376 (756)
Q Consensus 307 ~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~ 376 (756)
..+...... ... ........+ +....... ...........+..+.. ........+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (278)
T 3oos_A 153 NALNDDSTVQEERKALSREWALMSFYSE-EKLEEALK-------------LPNSGKTVGNRLNYFRQVEYKDYDVRQKLK 218 (278)
T ss_dssp HHHTCTTSCHHHHHHHHHHHHHHHCSCH-HHHHHHTT-------------SCCCCEECHHHHHHHHHTTGGGCBCHHHHT
T ss_pred HhhcccccCchHHHHHHHHHhhcccCCc-HHHHHHhh-------------ccccchhHHHHHHHhhhcccccccHHHHHh
Confidence 111000000 000 000000000 00000000 00001111111111110 0001125668
Q ss_pred CCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 377 AVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 377 ~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++++|+|+|+|++|.+++.+. .+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 219 ~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 276 (278)
T 3oos_A 219 FVKIPSFIYCGKHDVQCPYIF-SCEIANLIPNATLTKFEESNHNPFVEEIDKFNQFVND 276 (278)
T ss_dssp TCCSCEEEEEETTCSSSCHHH-HHHHHHHSTTEEEEEETTCSSCHHHHSHHHHHHHHHH
T ss_pred CCCCCEEEEEeccCCCCCHHH-HHHHHhhCCCcEEEEcCCcCCCcccccHHHHHHHHHh
Confidence 899999999999999999995 9999999999999999999999999999999999974
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=224.31 Aligned_cols=229 Identities=19% Similarity=0.216 Sum_probs=151.4
Q ss_pred CCCCCceeeeeccCCCCCCCCCEEEEECCCCCc-hhhHHHhHhhhcC-CcEEEEeccCCCCCC-------C---hhHHHH
Q 004396 159 PDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGL-GLGLILHHKPLGK-AFEVRCLHIPVYDRT-------P---FEGLVK 226 (756)
Q Consensus 159 ~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s-~~~~~~~~~~L~~-gy~Vi~~Dl~G~G~S-------s---~~~~a~ 226 (756)
.+|.. ++|...|+ +.++|||+||++++ ...|..+++.|.+ +|+|+++|+||||.| + +++.++
T Consensus 9 ~~g~~---l~~~~~g~---~~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 82 (254)
T 2ocg_A 9 VNGVQ---LHYQQTGE---GDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAK 82 (254)
T ss_dssp ETTEE---EEEEEEEC---CSEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCCCCCTTHHHHHHH
T ss_pred ECCEE---EEEEEecC---CCCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCCCCChHHHHHHHH
Confidence 35544 45666665 34689999999888 6779999999955 599999999999988 2 566778
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHH--HHhHHh
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDEL--HCAVPY 304 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 304 (756)
|+.++++.++.. +++|+||||||.+|+.+|.++|++++++|++++........ ........... ......
T Consensus 83 ~~~~~l~~l~~~----~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 154 (254)
T 2ocg_A 83 DAVDLMKALKFK----KVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDED----SMIYEGIRDVSKWSERTRK 154 (254)
T ss_dssp HHHHHHHHTTCS----SEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHH----HHHHHTTSCGGGSCHHHHH
T ss_pred HHHHHHHHhCCC----CEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhh----HHHHHHHHHHHHHHHHhHH
Confidence 888888876543 89999999999999999999999999999999854221100 00000000000 000000
Q ss_pred HhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEE
Q 004396 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (756)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLv 384 (756)
.+........ .......+...+. ..... .........+.++++|+|+
T Consensus 155 ~~~~~~~~~~------------~~~~~~~~~~~~~-------~~~~~--------------~~~~~~~~~l~~i~~P~li 201 (254)
T 2ocg_A 155 PLEALYGYDY------------FARTCEKWVDGIR-------QFKHL--------------PDGNICRHLLPRVQCPALI 201 (254)
T ss_dssp HHHHHHCHHH------------HHHHHHHHHHHHH-------GGGGS--------------GGGBSSGGGGGGCCSCEEE
T ss_pred HHHHHhcchh------------hHHHHHHHHHHHH-------HHHhc--------------cCCchhhhhhhcccCCEEE
Confidence 0000000000 0000000000000 00000 0000012567889999999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 385 LASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 385 I~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|+|++|.++|.+. ++.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 202 i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 251 (254)
T 2ocg_A 202 VHGEKDPLVPRFH-ADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAED 251 (254)
T ss_dssp EEETTCSSSCHHH-HHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred EecCCCccCCHHH-HHHHHHhCCCCEEEEcCCCCCchhhhCHHHHHHHHHH
Confidence 9999999999995 8999999999999999999999999999999999974
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-24 Score=220.12 Aligned_cols=243 Identities=16% Similarity=0.214 Sum_probs=162.5
Q ss_pred cccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC------ChhHHHHH
Q 004396 154 KEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKF 227 (756)
Q Consensus 154 ~~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S------s~~~~a~d 227 (756)
..+.+.||.. ++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|
T Consensus 5 ~~~~~~~g~~---l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~ 77 (262)
T 3r0v_A 5 QTVPSSDGTP---IAFERSGS----GPPVVLVGGALSTRAGGAPLAERLAPHFTVICYDRRGRGDSGDTPPYAVEREIED 77 (262)
T ss_dssp CEEECTTSCE---EEEEEEEC----SSEEEEECCTTCCGGGGHHHHHHHTTTSEEEEECCTTSTTCCCCSSCCHHHHHHH
T ss_pred heEEcCCCcE---EEEEEcCC----CCcEEEECCCCcChHHHHHHHHHHhcCcEEEEEecCCCcCCCCCCCCCHHHHHHH
Confidence 4456677776 45556665 78999999999999999999999999999999999999999 58999999
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHH-----HhH
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH-----CAV 302 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 302 (756)
+.+++++++ ++++++||||||.+|+.+|.++| +++++|+++|..................+..... ...
T Consensus 78 ~~~~~~~l~-----~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (262)
T 3r0v_A 78 LAAIIDAAG-----GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAV 151 (262)
T ss_dssp HHHHHHHTT-----SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHhcC-----CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccchhhHH
Confidence 999999965 38999999999999999999999 9999999998775433222111111111111110 011
Q ss_pred HhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcE
Q 004396 303 PYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEV 382 (756)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 382 (756)
..++..... . +.+..+.+...... ...... .....+....... .......+.++++|+
T Consensus 152 ~~~~~~~~~-------------~-~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~-~~~~~~~l~~i~~P~ 209 (262)
T 3r0v_A 152 TYFMTEGVG-------------V-PPDLVAQMQQAPMW--PGMEAV-----AHTLPYDHAVMGD-NTIPTARFASISIPT 209 (262)
T ss_dssp HHHHHHTSC-------------C-CHHHHHHHHTSTTH--HHHHHT-----GGGHHHHHHHHTT-SCCCHHHHTTCCSCE
T ss_pred HHHhhcccC-------------C-CHHHHHHHHhhhcc--cchHHH-----Hhhhhhhhhhhhc-CCCCHHHcCcCCCCE
Confidence 111111010 1 11111111110000 000000 0000000000000 000125678899999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 383 LVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 383 LvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|+|+|++|.+++.+. .+.+.+.++++++++++++|| +++|+++++.|.+
T Consensus 210 lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH---~~~p~~~~~~i~~ 258 (262)
T 3r0v_A 210 LVMDGGASPAWIRHT-AQELADTIPNARYVTLENQTH---TVAPDAIAPVLVE 258 (262)
T ss_dssp EEEECTTCCHHHHHH-HHHHHHHSTTEEEEECCCSSS---SCCHHHHHHHHHH
T ss_pred EEEeecCCCCCCHHH-HHHHHHhCCCCeEEEecCCCc---ccCHHHHHHHHHH
Confidence 999999999999985 999999999999999999999 4789999998873
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.2e-25 Score=230.29 Aligned_cols=266 Identities=13% Similarity=0.091 Sum_probs=166.6
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhh-hcCCcEEEEeccCCCCCC-------ChhHHHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKP-LGKAFEVRCLHIPVYDRT-------PFEGLVKF 227 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~-L~~gy~Vi~~Dl~G~G~S-------s~~~~a~d 227 (756)
++..+|.. ++|...|+ +|+|||+||++++...|..+++. ++++|+|+++|+||||.| +++++++|
T Consensus 13 ~~~~~g~~---l~~~~~g~----~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~ 85 (309)
T 3u1t_A 13 TVEVEGAT---IAYVDEGS----GQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRLQDHVAY 85 (309)
T ss_dssp EEEETTEE---EEEEEEEC----SSEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCSSCCCHHHHHHH
T ss_pred EEEECCeE---EEEEEcCC----CCEEEEECCCcchhhhHHHHHHHHHhCCCEEEEEccCCCCCCCCCCcccCHHHHHHH
Confidence 34445655 46666666 78999999999999999999999 588999999999999988 58999999
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcC--CcCCchhHHhhchhHHHHhHHhH
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS--QLQPLFPILKAMPDELHCAVPYL 305 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 305 (756)
+.++++.++.. +++|+||||||.+|+.+|.++|++|+++|++++....... .+............... .+..
T Consensus 86 ~~~~~~~~~~~----~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 159 (309)
T 3u1t_A 86 MDGFIDALGLD----DMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLR--TADV 159 (309)
T ss_dssp HHHHHHHHTCC----SEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHT--STTH
T ss_pred HHHHHHHcCCC----ceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHh--ccch
Confidence 99999997654 8999999999999999999999999999999986643211 11111111000000000 0000
Q ss_pred hhhhcCChhHHHHHh-----hhcCCChHHHHHHHHhhhhhhh--hhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCC
Q 004396 306 LSYVMGDPIKMAMVN-----IENRLPPRIKLEQLSNNLPALL--PRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAV 378 (756)
Q Consensus 306 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 378 (756)
............... ....... .....+...+.... ................. ............+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~i 235 (309)
T 3u1t_A 160 GEKMVLDGNFFVETILPEMGVVRSLSE-AEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPA---FAEAEVLKNGEWLMAS 235 (309)
T ss_dssp HHHHHTTTCHHHHTHHHHTSCSSCCCH-HHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSH---HHHHHHHHHHHHHHHC
T ss_pred hhhhccccceehhhhcccccccccCCH-HHHHHHHHhcCCccccchHHHHHHHhccccccc---hhhhhhhhhhhhcccC
Confidence 000000000000000 0000110 11111111000000 00000000000000000 0011111233567889
Q ss_pred CCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 379 ~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
++|+|+|+|++|.+++.+. .+.+.+.++++++++++++||++++|+|+++++.|. .|+++
T Consensus 236 ~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~ 295 (309)
T 3u1t_A 236 PIPKLLFHAEPGALAPKPV-VDYLSENVPNLEVRFVGAGTHFLQEDHPHLIGQGIA--DWLRR 295 (309)
T ss_dssp CSCEEEEEEEECSSSCHHH-HHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHH--HHHHH
T ss_pred CCCEEEEecCCCCCCCHHH-HHHHHhhCCCCEEEEecCCcccchhhCHHHHHHHHH--HHHHh
Confidence 9999999999999999995 889999999999999999999999999999999998 45544
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=223.31 Aligned_cols=263 Identities=17% Similarity=0.172 Sum_probs=162.9
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC---------ChhHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT---------PFEGLV 225 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S---------s~~~~a 225 (756)
++..+|.. ++|...|. +++|+|||+||++++...|..+++.| .+||+|+++|+||||.| ++++++
T Consensus 8 ~~~~~g~~---l~~~~~g~--~~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 82 (286)
T 3qit_A 8 FLEFGGNQ---ICLCSWGS--PEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFL 82 (286)
T ss_dssp EEEETTEE---EEEEEESC--TTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGGCSHHHHH
T ss_pred eeecCCce---EEEeecCC--CCCCEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCCcCHHHHH
Confidence 34456666 45555554 35789999999999999999999999 55799999999999988 478899
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhH
Q 004396 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (756)
Q Consensus 226 ~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (756)
+++.++++++.. ++++++||||||.+|+.+|.++|++++++|++++............................
T Consensus 83 ~~~~~~~~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 156 (286)
T 3qit_A 83 AQIDRVIQELPD----QPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQ-- 156 (286)
T ss_dssp HHHHHHHHHSCS----SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTCCCC--
T ss_pred HHHHHHHHhcCC----CCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhcccc--
Confidence 999999998654 48999999999999999999999999999999987754333211111111000000000000
Q ss_pred hhhhcCChhHHH--HHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHH---HHHHHHHhhhccCCCC
Q 004396 306 LSYVMGDPIKMA--MVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLL---KSASAYANSRLHAVKA 380 (756)
Q Consensus 306 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~i~~ 380 (756)
........... .......... .....+......... ..................+ ..........+.++++
T Consensus 157 -~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 232 (286)
T 3qit_A 157 -HPIFPDVATAASRLRQAIPSLSE-EFSYILAQRITQPNQ--GGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQV 232 (286)
T ss_dssp -CCCBSSHHHHHHHHHHHSTTSCH-HHHHHHHHHTEEEET--TEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHHHCCS
T ss_pred -ccccccHHHHHHHhhcCCcccCH-HHHHHHhhccccccc--cceeeeechhhhccccccccccccchhHHHHHHhccCC
Confidence 00000000000 0000000100 111111110000000 0000000000000000000 0011222356678999
Q ss_pred cEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 381 EVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 381 PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|+|+|+|++|.+++.+. .+.+.+.+++++++++++ ||++++|+|+++++.|.+
T Consensus 233 P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 233 PTTLVYGDSSKLNRPED-LQQQKMTMTQAKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp CEEEEEETTCCSSCHHH-HHHHHHHSTTSEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred CeEEEEeCCCcccCHHH-HHHHHHHCCCCeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 99999999999999995 999999999999999999 999999999999999874
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.9e-24 Score=227.19 Aligned_cols=260 Identities=15% Similarity=0.122 Sum_probs=175.3
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcC-CcEEEEeccCCCCCC--------ChhHHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK-AFEVRCLHIPVYDRT--------PFEGLV 225 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~-gy~Vi~~Dl~G~G~S--------s~~~~a 225 (756)
.+.+.||..+.+..+...+. +.|+|||+||++++...|..+++.|.+ +|+|+++|+||||.| ++++++
T Consensus 39 ~~~~~dg~~l~~~~~~p~~~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 115 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPTGT---PKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFV 115 (342)
T ss_dssp EEECTTSCEEEEEEECCSSC---CSEEEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCTTSTTSCSSTTCCSCTHHHH
T ss_pred eEEccCCeEEEEEEeCCCCC---CCcEEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCCCcCcHHHHH
Confidence 45666777755444444433 478999999999999999999999954 899999999999988 478889
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhH
Q 004396 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (756)
Q Consensus 226 ~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (756)
+|+.++++.+....+..+++|+||||||.+++.+|.++|++++++|+++|................ . ......
T Consensus 116 ~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~---~----~~~~~~ 188 (342)
T 3hju_A 116 RDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLA---A----KVLNLV 188 (342)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHH---H----HHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHH---H----HHHHHh
Confidence 999999999888777779999999999999999999999999999999987654322211111111 0 111111
Q ss_pred hhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEE
Q 004396 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (756)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI 385 (756)
+.......... . ...........+.... ..........+....+. ........+.++++|+|+|
T Consensus 189 ~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~Pvlii 252 (342)
T 3hju_A 189 LPNLSLGPIDS---S--VLSRNKTEVDIYNSDP----------LICRAGLKVCFGIQLLN-AVSRVERALPKLTVPFLLL 252 (342)
T ss_dssp CTTCBCCCCCG---G--GSCSCHHHHHHHHTCT----------TCCCSCCBHHHHHHHHH-HHHHHHHHGGGCCSCEEEE
T ss_pred ccccccCcccc---c--ccccchHHHHHHhcCc----------ccccccccHHHHHHHHH-HHHHHHHHHHhCCcCEEEE
Confidence 11110000000 0 0000000111111100 00011111222222222 2223346788999999999
Q ss_pred EeCCCCCCCCHHHHHHHHHhCC--CeEEEEEcCCCCcccccchhhHHHHhhhc-ccccc
Q 004396 386 ASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIKGT-CKYRR 441 (756)
Q Consensus 386 ~G~~D~~vp~~~~~~~l~~~l~--~~~l~~i~~aGH~~~~e~p~~~~~~I~~~-~f~rr 441 (756)
+|++|.+++.+. ++.+.+.++ ++++++++++||+++.++|+.+++.+.+. .|+.+
T Consensus 253 ~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~ 310 (342)
T 3hju_A 253 QGSADRLCDSKG-AYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQ 310 (342)
T ss_dssp EETTCSSSCHHH-HHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCcccChHH-HHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhc
Confidence 999999999995 999999998 89999999999999999999988888766 55543
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=220.77 Aligned_cols=234 Identities=15% Similarity=0.125 Sum_probs=154.1
Q ss_pred CCCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEE
Q 004396 177 KGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~Lv 247 (756)
.++|+|||+||++++...|..+++.|. +||+|+++|+||||.| +++++++++.++++.+... +++|+
T Consensus 44 ~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~ 119 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALLERLGVA----RASVI 119 (315)
T ss_dssp CCSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCCCHHHHHHHHHHHHHHTTCS----CEEEE
T ss_pred CCCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCC----ceEEE
Confidence 458999999999999999999999994 5799999999999988 5889999999999986554 89999
Q ss_pred EeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcC----CcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhc
Q 004396 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRS----QLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIEN 323 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (756)
||||||.+|+.+|.++|++++++|+++|....... ...............................
T Consensus 120 G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 189 (315)
T 4f0j_A 120 GHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAG---------- 189 (315)
T ss_dssp EETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTSTT----------
T ss_pred EecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcccCChHHHHHHHHHHHhcc----------
Confidence 99999999999999999999999999985421110 0001111111000000000000000000000
Q ss_pred CCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH--HHHHHhhhccCCCCcEEEEEeCCCCCCC-------
Q 004396 324 RLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS--ASAYANSRLHAVKAEVLVLASGKDNMLP------- 394 (756)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~PvLvI~G~~D~~vp------- 394 (756)
... .....+..... ............+....... ........+.++++|+|+++|++|.++|
T Consensus 190 ~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~~~~~~~ 260 (315)
T 4f0j_A 190 EWR--PEFDRWVQMQA-------GMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPA 260 (315)
T ss_dssp CCC--GGGHHHHHHHH-------HHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTTGGGSCH
T ss_pred ccC--CchHHHHHHHH-------HHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCcccccccc
Confidence 000 00011111000 00111111111111111111 0111235688999999999999999999
Q ss_pred ---------CHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 395 ---------SEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 395 ---------~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
.+ ..+.+.+.++++++++++++||+++.++|+++++.|.
T Consensus 261 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 308 (315)
T 4f0j_A 261 ELKARLGNYAQ-LGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALL 308 (315)
T ss_dssp HHHTTSCCHHH-HHHHHHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred ccccccccchh-hhhHHHhhcCCceEEEeCCCCcchhhhCHHHHHHHHH
Confidence 66 3889999999999999999999999999999999998
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.7e-24 Score=217.30 Aligned_cols=244 Identities=17% Similarity=0.171 Sum_probs=159.5
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcC--CcEEEEeccCCCCCC------ChhHHHHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRT------PFEGLVKFV 228 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~--gy~Vi~~Dl~G~G~S------s~~~~a~dv 228 (756)
++.+|.. ++|...|+ +|+|||+||++++...|..+++.|.+ +|+|+++|+||||.| +++++++|+
T Consensus 6 ~~~~g~~---l~y~~~g~----~~~vv~lhG~~~~~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 78 (272)
T 3fsg_A 6 EYLTRSN---ISYFSIGS----GTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSDNVLETL 78 (272)
T ss_dssp CEECTTC---CEEEEECC----SSEEEEECCTTCCHHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSSCSHHHHHHHH
T ss_pred EEecCCe---EEEEEcCC----CCeEEEEeCCCCcHHHHHHHHHHHhccCceEEEEecCCCCCCCCCCCCCCHHHHHHHH
Confidence 3446666 46666665 78999999999999999999999965 999999999999998 589999999
Q ss_pred HHHHHH-hhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCC--chhHH-hhchh-HHHHhHH
Q 004396 229 EETVRR-EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP--LFPIL-KAMPD-ELHCAVP 303 (756)
Q Consensus 229 ~~~i~~-l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~--~~~~~-~~~~~-~~~~~~~ 303 (756)
.+++++ +... +++|+||||||.+|+.+|.++|++++++|+++|........... ..... ..+.. .......
T Consensus 79 ~~~l~~~~~~~----~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (272)
T 3fsg_A 79 IEAIEEIIGAR----RFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFA 154 (272)
T ss_dssp HHHHHHHHTTC----CEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHH
T ss_pred HHHHHHHhCCC----cEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHH
Confidence 999998 4443 89999999999999999999999999999999876322111000 00000 00000 0000000
Q ss_pred hHhhhh-cCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcE
Q 004396 304 YLLSYV-MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEV 382 (756)
Q Consensus 304 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 382 (756)
.+.... ...+ .....+.......... ....... ...............+.++++|+
T Consensus 155 ~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~ 211 (272)
T 3fsg_A 155 DFLSMNVIINN---------------QAWHDYQNLIIPGLQK-------EDKTFID-QLQNNYSFTFEEKLKNINYQFPF 211 (272)
T ss_dssp HHHHHCSEESH---------------HHHHHHHHHTHHHHHH-------CCHHHHH-HHTTSCSCTTHHHHTTCCCSSCE
T ss_pred HHHHHhccCCC---------------chhHHHHHHhhhhhhh-------ccHHHHH-HHhhhcCCChhhhhhhccCCCCE
Confidence 000000 0000 0000000000000000 0000000 00000000000113558899999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 383 LVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 383 LvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|+|+|++|.+++.+. .+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 212 l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 263 (272)
T 3fsg_A 212 KIMVGRNDQVVGYQE-QLKLINHNENGEIVLLNRTGHNLMIDQREAVGFHFDL 263 (272)
T ss_dssp EEEEETTCTTTCSHH-HHHHHTTCTTEEEEEESSCCSSHHHHTHHHHHHHHHH
T ss_pred EEEEeCCCCcCCHHH-HHHHHHhcCCCeEEEecCCCCCchhcCHHHHHHHHHH
Confidence 999999999999995 9999999999999999999999999999999999883
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.4e-24 Score=223.26 Aligned_cols=253 Identities=14% Similarity=0.093 Sum_probs=154.4
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC------------Chh
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------------PFE 222 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S------------s~~ 222 (756)
..+..+|.. ++|...|+ +|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++
T Consensus 16 ~~~~~~g~~---l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~ 88 (306)
T 3r40_A 16 EWINTSSGR---IFARVGGD----GPPLLLLHGFPQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYTKR 88 (306)
T ss_dssp EEECCTTCC---EEEEEEEC----SSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTSCCCCCCTTCGGGSHH
T ss_pred EEEEeCCEE---EEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHhccCCeEEEeCCCCCCCCCCCCCCcccCCCCHH
Confidence 344556776 46666665 78999999999999999999999988999999999999987 377
Q ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHH-Hh
Q 004396 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH-CA 301 (756)
Q Consensus 223 ~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 301 (756)
++++|+.++++.++.. +++|+||||||.+|+.+|.++|++++++|++++............ ........... ..
T Consensus 89 ~~~~~~~~~l~~l~~~----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 163 (306)
T 3r40_A 89 AMAKQLIEAMEQLGHV----HFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNR-AYALKIYHWSFLAQ 163 (306)
T ss_dssp HHHHHHHHHHHHTTCS----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSH-HHHHHSTHHHHHTS
T ss_pred HHHHHHHHHHHHhCCC----CEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhh-hhhhhhHHHHHhhc
Confidence 8899999999986554 899999999999999999999999999999998542111000000 00000000000 00
Q ss_pred HHhHhhhhc-CChhHHHHHhhh--------cCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH-----
Q 004396 302 VPYLLSYVM-GDPIKMAMVNIE--------NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA----- 367 (756)
Q Consensus 302 ~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 367 (756)
......... ..+......... ..... +..+.+...+. ...........+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 229 (306)
T 3r40_A 164 PAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDP-RAVEHYRIAFA-------------DPMRRHVMCEDYRAGAYADF 229 (306)
T ss_dssp CTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCH-HHHHHHHHHHT-------------SHHHHHHHHHHHHHHHTHHH
T ss_pred ccchHHHHHcCCHHHHHHHHhhcccCCCccccCCH-HHHHHHHHHHc-------------cCCCcchhhHHHHhcccccc
Confidence 000000000 000000000000 00000 11111111000 001111111111110
Q ss_pred --HHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 368 --SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 368 --~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
.......+.++++|+|+|+|++|.+++.....+.+.+..++++++++ ++||++++|+|+++++.|.
T Consensus 230 ~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~ 297 (306)
T 3r40_A 230 EHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPI-ESGHFLPEEAPDQTAEALV 297 (306)
T ss_dssp HHHHHHHHHTCCBCSCEEEEEETTCC------CHHHHHHHBSSEEEEEE-SSCSCHHHHSHHHHHHHHH
T ss_pred hhhhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEe-cCCcCchhhChHHHHHHHH
Confidence 00011257899999999999999999843347777888899999999 6899999999999999998
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-23 Score=220.46 Aligned_cols=246 Identities=16% Similarity=0.110 Sum_probs=152.5
Q ss_pred cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHh-HhhhcC-CcEEEEeccCCCCCCC----------hhHHH
Q 004396 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILH-HKPLGK-AFEVRCLHIPVYDRTP----------FEGLV 225 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~-~~~L~~-gy~Vi~~Dl~G~G~Ss----------~~~~a 225 (756)
+.||.. ++|...|. +++|+|||+||++++...|..+ ++.|++ ||+|+++|+||||.|+ +++++
T Consensus 7 ~~~g~~---l~y~~~G~--~~~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~~a 81 (298)
T 1q0r_A 7 PSGDVE---LWSDDFGD--PADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELA 81 (298)
T ss_dssp EETTEE---EEEEEESC--TTSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHH
T ss_pred ccCCeE---EEEEeccC--CCCCeEEEEcCCCCCccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHHHHH
Confidence 345555 46666674 2478999999999999999874 488955 6999999999999873 57899
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC-cCCcC--------------CcC-Cchh
Q 004396 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT-SFGRS--------------QLQ-PLFP 289 (756)
Q Consensus 226 ~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~-~~~~~--------------~~~-~~~~ 289 (756)
+|+.++++.++.. +++|+||||||.+|+.+|.++|++|+++|++++.. ..... ... ....
T Consensus 82 ~dl~~~l~~l~~~----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (298)
T 1q0r_A 82 ADAVAVLDGWGVD----RAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQP 157 (298)
T ss_dssp HHHHHHHHHTTCS----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHH
T ss_pred HHHHHHHHHhCCC----ceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccccccHH
Confidence 9999999997655 89999999999999999999999999999999865 21000 000 0000
Q ss_pred HHhhchh------HHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHH
Q 004396 290 ILKAMPD------ELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKL 363 (756)
Q Consensus 290 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (756)
....+.. .........+... . .....................+.... . ........+. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~----~ 222 (298)
T 1q0r_A 158 FLDALALMNQPAEGRAAEVAKRVSKW-----R-ILSGTGVPFDDAEYARWEERAIDHAG-G----VLAEPYAHYS----L 222 (298)
T ss_dssp HHHHHHHHHSCCCSHHHHHHHHHHHH-----H-HHHCSSSCCCHHHHHHHHHHHHHHTT-T----CCSCCCGGGG----C
T ss_pred HHHHHhccCcccccHHHHHHHHHHhh-----h-hccCCCCCCCHHHHHHHHHHHhhccC-C----ccchhhhhhh----h
Confidence 0000000 0000000000000 0 00000000111111111100000000 0 0000000000 0
Q ss_pred HHHHHHHHhhh-ccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 364 LKSASAYANSR-LHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 364 ~~~~~~~~~~~-l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
. ...+.... +.++++|+|+|+|++|.++|++. .+.+.+.+|++++++++++|| |.|+++++.|.
T Consensus 223 ~--~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~~~gH----e~p~~~~~~i~ 287 (298)
T 1q0r_A 223 T--LPPPSRAAELREVTVPTLVIQAEHDPIAPAPH-GKHLAGLIPTARLAEIPGMGH----ALPSSVHGPLA 287 (298)
T ss_dssp C--CCCGGGGGGGGGCCSCEEEEEETTCSSSCTTH-HHHHHHTSTTEEEEEETTCCS----SCCGGGHHHHH
T ss_pred h--cCcccccccccccCCCEEEEEeCCCccCCHHH-HHHHHHhCCCCEEEEcCCCCC----CCcHHHHHHHH
Confidence 0 00011255 88999999999999999999995 999999999999999999999 78888888887
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.4e-24 Score=221.54 Aligned_cols=229 Identities=14% Similarity=0.140 Sum_probs=145.8
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvG 248 (756)
++|+|||+||++++...|..+++.| +++|+|+++|+||||.| +++++++|+.+++++++. .++++|||
T Consensus 9 ~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvG 85 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPP---DEKVVLLG 85 (264)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSCT---TCCEEEEE
T ss_pred CCCeEEEECCCccccchHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhCC---CCCeEEEE
Confidence 4789999999999999999999999 57899999999999988 478899999999998742 23899999
Q ss_pred eChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch-hHHhhchhHHHHhHHhHhhhhcCCh----------hHHH
Q 004396 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF-PILKAMPDELHCAVPYLLSYVMGDP----------IKMA 317 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 317 (756)
|||||.+++.+|.++|++|+++|++++............. ......... ....... .....+ ....
T Consensus 86 hSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 2wfl_A 86 HSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPAD--MMLDSQF-STYGNPENPGMSMILGPQFM 162 (264)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTT--TTTTCEE-EEESCTTSCEEEEECCHHHH
T ss_pred eChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcch--hhhhhhh-hhccCCCCCcchhhhhHHHH
Confidence 9999999999999999999999999974311111100000 010000000 0000000 000000 0000
Q ss_pred HHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhc---cCCCCcEEEEEeCCCCCCC
Q 004396 318 MVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL---HAVKAEVLVLASGKDNMLP 394 (756)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~PvLvI~G~~D~~vp 394 (756)
.......... +.. .....+ . .+...... .+.. ...+ ...++|+|+|+|++|.+++
T Consensus 163 ~~~~~~~~~~-~~~-~~~~~~----------~--~~~~~~~~---~~~~-----~~~~~~~~~~~~P~l~i~G~~D~~~~ 220 (264)
T 2wfl_A 163 ALKMFQNCSV-EDL-ELAKML----------T--RPGSLFFQ---DLAK-----AKKFSTERYGSVKRAYIFCNEDKSFP 220 (264)
T ss_dssp HHHTSTTSCH-HHH-HHHHHH----------C--CCEECCHH---HHTT-----SCCCCTTTGGGSCEEEEEETTCSSSC
T ss_pred HHHHhcCCCH-HHH-HHHHhc----------c--CCCccccc---cccc-----ccccChHHhCCCCeEEEEeCCcCCCC
Confidence 0000000000 000 000000 0 00000000 0000 0011 1136899999999999999
Q ss_pred CHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 395 SEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 395 ~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.+. ++.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 221 ~~~-~~~~~~~~p~~~~~~i~~~gH~~~~e~P~~~~~~l~~ 260 (264)
T 2wfl_A 221 VEF-QKWFVESVGADKVKEIKEADHMGMLSQPREVCKCLLD 260 (264)
T ss_dssp HHH-HHHHHHHHCCSEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred HHH-HHHHHHhCCCceEEEeCCCCCchhhcCHHHHHHHHHH
Confidence 995 8899999999999999999999999999999999984
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-23 Score=212.27 Aligned_cols=213 Identities=15% Similarity=0.139 Sum_probs=142.0
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
+|+|||+||++++...|..+++.| +++|+|+++|+||||.| +++++++|+.++++.+... +.++++|+|||
T Consensus 16 ~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~~lvG~S 94 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK-GYEKIAVAGLS 94 (247)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH-TCCCEEEEEET
T ss_pred CcEEEEECCCCCChHHHHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHHHHHHHHHHHHHHHHc-CCCeEEEEEeC
Confidence 578999999999999999999999 46899999999999977 4667777766654443321 12389999999
Q ss_pred hhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHH
Q 004396 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (756)
Q Consensus 251 ~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (756)
|||.+|+.+|.++| |+++|+++++.... ........ .......... . ...... .
T Consensus 95 mGG~ia~~~a~~~p--v~~lvl~~~~~~~~-----~~~~~~~~----~~~~~~~~~~-~-------------~~~~~~-~ 148 (247)
T 1tqh_A 95 LGGVFSLKLGYTVP--IEGIVTMCAPMYIK-----SEETMYEG----VLEYAREYKK-R-------------EGKSEE-Q 148 (247)
T ss_dssp HHHHHHHHHHTTSC--CSCEEEESCCSSCC-----CHHHHHHH----HHHHHHHHHH-H-------------HTCCHH-H
T ss_pred HHHHHHHHHHHhCC--CCeEEEEcceeecC-----cchhhhHH----HHHHHHHhhc-c-------------cccchH-H
Confidence 99999999999998 99999877643211 00000000 0000000000 0 001110 0
Q ss_pred HHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCC--
Q 004396 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN-- 408 (756)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~-- 408 (756)
.......+.. .+...+... .....+....+.++++|+|+|+|++|.++|++. ++.+.+.+++
T Consensus 149 ~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~-~~~~~~~~~~~~ 212 (247)
T 1tqh_A 149 IEQEMEKFKQ-----------TPMKTLKAL----QELIADVRDHLDLIYAPTFVVQARHDEMINPDS-ANIIYNEIESPV 212 (247)
T ss_dssp HHHHHHHHTT-----------SCCTTHHHH----HHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTH-HHHHHHHCCCSS
T ss_pred HHhhhhcccC-----------CCHHHHHHH----HHHHHHHHhhcccCCCCEEEEecCCCCCCCcch-HHHHHHhcCCCc
Confidence 1111110000 011111111 111123346788999999999999999999995 9999999986
Q ss_pred eEEEEEcCCCCcccccc-hhhHHHHhh
Q 004396 409 CIVRNFKDNGHTLLLEE-GISLLTIIK 434 (756)
Q Consensus 409 ~~l~~i~~aGH~~~~e~-p~~~~~~I~ 434 (756)
+++++++++||++++|+ |+++++.|.
T Consensus 213 ~~~~~~~~~gH~~~~e~~~~~~~~~i~ 239 (247)
T 1tqh_A 213 KQIKWYEQSGHVITLDQEKDQLHEDIY 239 (247)
T ss_dssp EEEEEETTCCSSGGGSTTHHHHHHHHH
T ss_pred eEEEEeCCCceeeccCccHHHHHHHHH
Confidence 69999999999999986 799999887
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.91 E-value=3.9e-24 Score=221.11 Aligned_cols=230 Identities=11% Similarity=0.041 Sum_probs=145.7
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGh 249 (756)
+++|||+||++.+...|..+++.|+ .+|+|+++|+||||.| +++++++|+.++++.+.. .++++||||
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvGh 79 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPP---GEKVILVGE 79 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSCT---TCCEEEEEE
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhccc---cCCeEEEEE
Confidence 5789999999999999999999994 6899999999999998 478999999999998631 238999999
Q ss_pred ChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch-hHHhhchhHHHHhHHhHhhh----------hcCChhHHHH
Q 004396 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF-PILKAMPDELHCAVPYLLSY----------VMGDPIKMAM 318 (756)
Q Consensus 250 S~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 318 (756)
||||.+++.+|.++|++|+++|++++............. ......+. ........ ....+.. ..
T Consensus 80 SmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 154 (257)
T 3c6x_A 80 SCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPD----WKDTTYFTYTKDGKEITGLKLGFTL-LR 154 (257)
T ss_dssp ETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCC----CTTCEEEEEEETTEEEEEEECCHHH-HH
T ss_pred CcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcc----hhhhhhhhccCCCCccccccccHHH-HH
Confidence 999999999999999999999999975321111100000 00000000 00000000 0000000 00
Q ss_pred HhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHH
Q 004396 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398 (756)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~ 398 (756)
........ .... .... ... .+....... +..........+ .++|+|+|+|++|.++|++.
T Consensus 155 ~~~~~~~~-~~~~-~~~~----------~~~--~~~~~~~~~---~~~~~~~~~~~~--~~~P~l~i~G~~D~~~p~~~- 214 (257)
T 3c6x_A 155 ENLYTLCG-PEEY-ELAK----------MLT--RKGSLFQNI---LAKRPFFTKEGY--GSIKKIYVWTDQDEIFLPEF- 214 (257)
T ss_dssp HHTSTTSC-HHHH-HHHH----------HHC--CCBCCCHHH---HHHSCCCCTTTG--GGSCEEEEECTTCSSSCHHH-
T ss_pred HHHhcCCC-HHHH-HHHH----------Hhc--CCCccchhh---hccccccChhhc--CcccEEEEEeCCCcccCHHH-
Confidence 00000000 0000 0000 000 000000000 000000000111 26899999999999999995
Q ss_pred HHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhc
Q 004396 399 AKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (756)
Q Consensus 399 ~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (756)
++.+.+.+|++++++++++||++++|+|+++++.|.+.
T Consensus 215 ~~~~~~~~~~~~~~~i~~~gH~~~~e~P~~~~~~l~~f 252 (257)
T 3c6x_A 215 QLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEILQEV 252 (257)
T ss_dssp HHHHHHHSCCSEEEECCSCCSCHHHHSHHHHHHHHHHH
T ss_pred HHHHHHHCCCCeEEEeCCCCCCcccCCHHHHHHHHHHH
Confidence 89999999999999999999999999999999999843
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.1e-24 Score=219.31 Aligned_cols=241 Identities=15% Similarity=0.095 Sum_probs=159.1
Q ss_pred eccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----------ChhHHHHHHHHHHHHhhc
Q 004396 169 PVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVEETVRREHA 237 (756)
Q Consensus 169 ~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----------s~~~~a~dv~~~i~~l~~ 237 (756)
|...|+ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.+..
T Consensus 21 ~~~~g~---~~~~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (282)
T 3qvm_A 21 INITGG---GEKTVLLAHGFGCDQNMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDL 97 (282)
T ss_dssp CEEEEC---SSCEEEEECCTTCCGGGGTTTHHHHHTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHTTC
T ss_pred eeecCC---CCCeEEEECCCCCCcchHHHHHHHHhcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcCC
Confidence 334454 358999999999999999999999988999999999999988 467789999999998654
Q ss_pred cCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcC--C-c-hhHHhhchhHHHHhHHhHhhhhcCCh
Q 004396 238 SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQ--P-L-FPILKAMPDELHCAVPYLLSYVMGDP 313 (756)
Q Consensus 238 ~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (756)
++++|+||||||.+|+.+|.++|++++++|+++|.......... . . .................+....
T Consensus 98 ----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 169 (282)
T 3qvm_A 98 ----VNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYL---- 169 (282)
T ss_dssp ----CSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHH----
T ss_pred ----CceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHH----
Confidence 38999999999999999999999999999999997644322100 0 0 0000000000000000000000
Q ss_pred hHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCC
Q 004396 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNML 393 (756)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~v 393 (756)
................+...+.. ............. ........+.++++|+|+|+|++|.++
T Consensus 170 ----~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~ 232 (282)
T 3qvm_A 170 ----APLVMGASHSSELIGELSGSFCT-----------TDPIVAKTFAKAT--FFSDYRSLLEDISTPALIFQSAKDSLA 232 (282)
T ss_dssp ----HHHHHCTTSCHHHHHHHHHHHHH-----------SCHHHHHHHHHHH--HSCBCGGGGGGCCSCEEEEEEEECTTC
T ss_pred ----HhhccCCccchhhHHHHHHHHhc-----------CCcHHHHHHHHHH--hcccHHHHHhcCCCCeEEEEeCCCCcC
Confidence 00000001111111111111110 0111111111100 001113667889999999999999999
Q ss_pred CCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhccccc
Q 004396 394 PSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (756)
Q Consensus 394 p~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~r 440 (756)
+.+. .+.+.+.++++++++++++||+++.|+|+++++.|. .|++
T Consensus 233 ~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~--~fl~ 276 (282)
T 3qvm_A 233 SPEV-GQYMAENIPNSQLELIQAEGHCLHMTDAGLITPLLI--HFIQ 276 (282)
T ss_dssp CHHH-HHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHHH--HHHH
T ss_pred CHHH-HHHHHHhCCCCcEEEecCCCCcccccCHHHHHHHHH--HHHH
Confidence 9995 999999999999999999999999999999999998 4444
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8e-24 Score=220.90 Aligned_cols=237 Identities=14% Similarity=0.095 Sum_probs=146.0
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvG 248 (756)
++|+|||+||++++...|..+++.| +++|+|+++|+||||.| +++++++|+.++++.+.. .++++|||
T Consensus 3 ~~~~vvllHG~~~~~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvG 79 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSA---DEKVILVG 79 (273)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCS---SSCEEEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHhcc---CCCEEEEe
Confidence 5789999999999999999999999 56899999999999988 478899999999998642 23899999
Q ss_pred eChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch-hHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCCh
Q 004396 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF-PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (756)
|||||.+++.+|.++|++|+++|++++............. ......+.. ....... .....+.... .......
T Consensus 80 hSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~---~~~~~~~ 153 (273)
T 1xkl_A 80 HSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAE--NWLDTQF-LPYGSPEEPL---TSMFFGP 153 (273)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTT--TTTTCEE-EECSCTTSCC---EEEECCH
T ss_pred cCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChh--hHHHHHH-hhccCCCCCc---cccccCH
Confidence 9999999999999999999999999975311111100000 010100000 0000000 0000000000 0000000
Q ss_pred HHHHHHH-Hhhhhh-hhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhc---cCCCCcEEEEEeCCCCCCCCHHHHHHH
Q 004396 328 RIKLEQL-SNNLPA-LLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL---HAVKAEVLVLASGKDNMLPSEDEAKRL 402 (756)
Q Consensus 328 ~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~PvLvI~G~~D~~vp~~~~~~~l 402 (756)
...... ...... .......... +....... +.. ...+ ...++|+|+|+|++|.++|++. ++.+
T Consensus 154 -~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~-----~~~~~~~~~~~~P~l~i~G~~D~~~p~~~-~~~~ 221 (273)
T 1xkl_A 154 -KFLAHKLYQLCSPEDLALASSLVR--PSSLFMED---LSK-----AKYFTDERFGSVKRVYIVCTEDKGIPEEF-QRWQ 221 (273)
T ss_dssp -HHHHHHTSTTSCHHHHHHHHHHCC--CBCCCHHH---HHH-----CCCCCTTTGGGSCEEEEEETTCTTTTHHH-HHHH
T ss_pred -HHHHHHhhccCCHHHHHHHHHhcC--CCchhhhh---hhc-----ccccchhhhCCCCeEEEEeCCccCCCHHH-HHHH
Confidence 000000 000000 0000000000 00000000 000 0111 1136899999999999999995 8899
Q ss_pred HHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 403 NNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 403 ~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 222 ~~~~p~~~~~~i~~aGH~~~~e~P~~~~~~i~~ 254 (273)
T 1xkl_A 222 IDNIGVTEAIEIKGADHMAMLCEPQKLCASLLE 254 (273)
T ss_dssp HHHHCCSEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred HHhCCCCeEEEeCCCCCCchhcCHHHHHHHHHH
Confidence 999999999999999999999999999999984
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.4e-24 Score=221.33 Aligned_cols=249 Identities=16% Similarity=0.124 Sum_probs=151.5
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC---------ChhHHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT---------PFEGLVK 226 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S---------s~~~~a~ 226 (756)
+...+|.. ++|...|.+ .++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++
T Consensus 10 ~~~~~g~~---l~~~~~g~~-~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~ 85 (285)
T 3bwx_A 10 WTSSDGLR---LHFRAYEGD-ISRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPMQYLQ 85 (285)
T ss_dssp EECTTSCE---EEEEEECBC-TTSCCEEEECCTTCCGGGGHHHHHHHBBTBCEEEECCTTBTTSCCCSSGGGCSHHHHHH
T ss_pred eecCCCce---EEEEEcCCC-CCCCcEEEECCCCcchhhHHHHHHHhhcCCEEEeecCCCCCCCCCCCCccccCHHHHHH
Confidence 34556655 466666652 1268899999999999999999999988999999999999988 3668899
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhch-----hHHHHh
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP-----DELHCA 301 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 301 (756)
|+.++++.++.. +++|+||||||.+|+.+|.++|++|+++|++++........ ......... ......
T Consensus 86 dl~~~l~~l~~~----~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 158 (285)
T 3bwx_A 86 DLEALLAQEGIE----RFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEG---LERIRGYVGQGRNFETWMHA 158 (285)
T ss_dssp HHHHHHHHHTCC----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHH---HHHHHHHTTCCCEESSHHHH
T ss_pred HHHHHHHhcCCC----ceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcch---hHHHHHHhcCCcccccHHHH
Confidence 999999998765 89999999999999999999999999999987643211100 000000000 000000
Q ss_pred HHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhh-h-----hhhhhhhccCChhhHHHHHHHHHHHHHHHhhhc
Q 004396 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPAL-L-----PRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL 375 (756)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 375 (756)
. ..+....... ................+... . .........+........ .......+
T Consensus 159 ~-~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 222 (285)
T 3bwx_A 159 A-RALQESSGDV--------YPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATP-------QVDMWPLF 222 (285)
T ss_dssp H-HHHHHHHTTT--------STTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCC-------SSCCHHHH
T ss_pred H-HHHHHhhhhc--------ccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccc-------cchhhHHH
Confidence 0 0000000000 00000000000000000000 0 000000000000000000 00000112
Q ss_pred cCC-CCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 376 HAV-KAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 376 ~~i-~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
.++ ++|+|+|+|++|.+++++. .+.+.+. +++++++++++||++++|+|+.++ .|.
T Consensus 223 ~~~~~~P~lii~G~~D~~~~~~~-~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~-~i~ 279 (285)
T 3bwx_A 223 DALATRPLLVLRGETSDILSAQT-AAKMASR-PGVELVTLPRIGHAPTLDEPESIA-AIG 279 (285)
T ss_dssp HHHTTSCEEEEEETTCSSSCHHH-HHHHHTS-TTEEEEEETTCCSCCCSCSHHHHH-HHH
T ss_pred HHccCCCeEEEEeCCCCccCHHH-HHHHHhC-CCcEEEEeCCCCccchhhCchHHH-HHH
Confidence 223 6999999999999999985 8999998 999999999999999999999875 454
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.5e-24 Score=217.00 Aligned_cols=230 Identities=13% Similarity=0.057 Sum_probs=148.7
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGh 249 (756)
+|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++++.. .++++|+||
T Consensus 4 g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~~~lvGh 80 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLPE---NEEVILVGF 80 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTSCT---TCCEEEEEE
T ss_pred CCcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHhcc---cCceEEEEe
Confidence 5899999999999999999999994 5799999999999988 588899999999998644 248999999
Q ss_pred ChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhh----------hcCChhHHHHH
Q 004396 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSY----------VMGDPIKMAMV 319 (756)
Q Consensus 250 S~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 319 (756)
||||.+|+.+|.++|++++++|++++............ ...............+.. ....+. ....
T Consensus 81 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 156 (258)
T 3dqz_A 81 SFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHV---LDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPK-FMKA 156 (258)
T ss_dssp TTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHH---HHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHH-HHHH
T ss_pred ChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHH---HHHhcccchhhhhcccchhhhhccChhhhhhhHH-HHHH
Confidence 99999999999999999999999998653322221111 111100000000000000 000000 0000
Q ss_pred hhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHH
Q 004396 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA 399 (756)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~ 399 (756)
........ .......... .+...+.. .+.. ..........++|+++|+|++|.++|++. .
T Consensus 157 ~~~~~~~~-~~~~~~~~~~-------------~~~~~~~~---~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~ 216 (258)
T 3dqz_A 157 RLYQNCPI-EDYELAKMLH-------------RQGSFFTE---DLSK--KEKFSEEGYGSVQRVYVMSSEDKAIPCDF-I 216 (258)
T ss_dssp HTSTTSCH-HHHHHHHHHC-------------CCEECCHH---HHHT--SCCCCTTTGGGSCEEEEEETTCSSSCHHH-H
T ss_pred HhhccCCH-HHHHHHHHhc-------------cCCchhhh---hhhc--cccccccccccCCEEEEECCCCeeeCHHH-H
Confidence 00000000 0000000000 00000000 0000 00001122236899999999999999995 9
Q ss_pred HHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 400 KRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 400 ~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 252 (258)
T 3dqz_A 217 RWMIDNFNVSKVYEIDGGDHMVMLSKPQKLFDSLSA 252 (258)
T ss_dssp HHHHHHSCCSCEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred HHHHHhCCcccEEEcCCCCCchhhcChHHHHHHHHH
Confidence 999999999999999999999999999999999984
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.8e-24 Score=226.64 Aligned_cols=258 Identities=12% Similarity=0.037 Sum_probs=156.3
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC--------ChhHHHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKF 227 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~~a~d 227 (756)
++..+|.. ++|...|+. .+|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|
T Consensus 25 ~~~~~g~~---l~y~~~G~g--~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~d 99 (318)
T 2psd_A 25 QMNVLDSF---INYYDSEKH--AENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGSYRLLDHYKY 99 (318)
T ss_dssp EEEETTEE---EEEEECCSC--TTSEEEEECCTTCCGGGGTTTGGGTTTTSEEEEECCTTSTTCCCCTTSCCSHHHHHHH
T ss_pred EEeeCCeE---EEEEEcCCC--CCCeEEEECCCCCcHHHHHHHHHHhhhcCeEEEEeCCCCCCCCCCCCCccCHHHHHHH
Confidence 34455655 466666651 246999999999999999999999988899999999999988 37888999
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCC--cCCcCCchhHHhhchhHHHHhHHhH
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFG--RSQLQPLFPILKAMPDELHCAVPYL 305 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (756)
+.++++.++. .++++|+||||||.+|+.+|.++|++|+++|++++..... ...+.........+........ .
T Consensus 100 l~~ll~~l~~---~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 174 (318)
T 2psd_A 100 LTAWFELLNL---PKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEKM--V 174 (318)
T ss_dssp HHHHHTTSCC---CSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHHHH--H
T ss_pred HHHHHHhcCC---CCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccchhh--h
Confidence 9999998765 1389999999999999999999999999999988643211 0111111011111000000000 0
Q ss_pred hhhhcCChhH--HHHHhhhcCCChHHHHHHHHhhhhhh---hhhhhhhhccCChh--hHHHHHHHHHHHHHHHhhhccCC
Q 004396 306 LSYVMGDPIK--MAMVNIENRLPPRIKLEQLSNNLPAL---LPRLSVMSDIIPKD--TLLWKLKLLKSASAYANSRLHAV 378 (756)
Q Consensus 306 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~i 378 (756)
. ...... ............ +....+...+... .............. ......... ......+.++
T Consensus 175 ~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i 246 (318)
T 2psd_A 175 L---ENNFFVETVLPSKIMRKLEP-EEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIV----RNYNAYLRAS 246 (318)
T ss_dssp T---TTCHHHHTHHHHTCSSCCCH-HHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHH----HHHHHHHHTC
T ss_pred h---cchHHHHhhccccccccCCH-HHHHHHHHhhcCccccccchhcccccccccccccchhHHHH----HHHHHHhccc
Confidence 0 000000 000000001111 1111111100000 00000000000000 000000111 1122456778
Q ss_pred -CCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 379 -KAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 379 -~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++|+|+|+|++| +++. . ++.+.+.+++++++++ ++||++++|+|+++++.|.+
T Consensus 247 ~~~P~Lvi~G~~D-~~~~-~-~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~ 300 (318)
T 2psd_A 247 DDLPKLFIESDPG-FFSN-A-IVEGAKKFPNTEFVKV-KGLHFLQEDAPDEMGKYIKS 300 (318)
T ss_dssp TTSCEEEEEEEEC-SSHH-H-HHHHHTTSSSEEEEEE-EESSSGGGTCHHHHHHHHHH
T ss_pred cCCCeEEEEeccc-cCcH-H-HHHHHHhCCCcEEEEe-cCCCCCHhhCHHHHHHHHHH
Confidence 999999999999 8876 4 8899999999999999 68999999999999999983
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=222.18 Aligned_cols=235 Identities=15% Similarity=0.144 Sum_probs=153.6
Q ss_pred eeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCC-CCC-------ChhHHHHHHHHHHHHhhccC
Q 004396 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVY-DRT-------PFEGLVKFVEETVRREHASS 239 (756)
Q Consensus 168 ~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~-G~S-------s~~~~a~dv~~~i~~l~~~~ 239 (756)
+|...|. +++|+|||+||++++...|..+++.|+++|+|+++|+||| |.| +++++++|+.++++.++..
T Consensus 58 ~~~~~g~--~~~~~vv~lHG~~~~~~~~~~~~~~L~~g~~vi~~D~~G~gG~s~~~~~~~~~~~~~~~l~~~l~~l~~~- 134 (306)
T 2r11_A 58 HVIASGP--EDAPPLVLLHGALFSSTMWYPNIADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVFDNLGIE- 134 (306)
T ss_dssp EEEEESC--TTSCEEEEECCTTTCGGGGTTTHHHHHHHSEEEEECCTTSSSSCEECSCCCCHHHHHHHHHHHHHHTTCS-
T ss_pred EEEeeCC--CCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCC-
Confidence 4444554 2478999999999999999999999977999999999999 776 5889999999999997654
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHH
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (756)
+++|+||||||.+|+.+|.++|++++++|+++|........................... ........
T Consensus 135 ---~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------ 202 (306)
T 2r11_A 135 ---KSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETF---LNWMMNDQ------ 202 (306)
T ss_dssp ---SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHHHH---HHHHTTTC------
T ss_pred ---ceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHHHH---HHHhhCCc------
Confidence 899999999999999999999999999999999775422111000000000000000000 00000000
Q ss_pred hhhcCCChHH-HHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHH
Q 004396 320 NIENRLPPRI-KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398 (756)
Q Consensus 320 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~ 398 (756)
....+.. ........+......+.......... .....+.++++|+|+|+|++|.+++.+.
T Consensus 203 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~i~~P~lii~G~~D~~~~~~~- 264 (306)
T 2r11_A 203 ---NVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYV--------------FTDEELRSARVPILLLLGEHEVIYDPHS- 264 (306)
T ss_dssp ---CCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCB--------------CCHHHHHTCCSCEEEEEETTCCSSCHHH-
T ss_pred ---cccccccccccHHHHHHHHhhhhhhhhccCCCCC--------------CCHHHHhcCCCCEEEEEeCCCcccCHHH-
Confidence 0000000 00000000000000000000000000 0014567889999999999999999885
Q ss_pred HH-HHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 399 AK-RLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 399 ~~-~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.+ .+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 302 (306)
T 2r11_A 265 ALHRASSFVPDIEAEVIKNAGHVLSMEQPTYVNERVMR 302 (306)
T ss_dssp HHHHHHHHSTTCEEEEETTCCTTHHHHSHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEeCCCCCCCcccCHHHHHHHHHH
Confidence 66 45557899999999999999999999999999873
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.5e-24 Score=222.40 Aligned_cols=260 Identities=10% Similarity=0.009 Sum_probs=163.3
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----------ChhHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGL 224 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----------s~~~~ 224 (756)
+...+|.. ++|...|+ +|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++
T Consensus 13 ~~~~~g~~---l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 85 (302)
T 1mj5_A 13 FIEIKGRR---MAYIDEGT----GDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEH 85 (302)
T ss_dssp EEEETTEE---EEEEEESC----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHH
T ss_pred EEEECCEE---EEEEEcCC----CCEEEEECCCCCchhhhHHHHHHhccCCeEEEEcCCCCCCCCCCCCCCcccccHHHH
Confidence 34456655 45666665 68999999999999999999999988899999999999986 46789
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCC-cCC-chhHHhhchhH----H
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQ-LQP-LFPILKAMPDE----L 298 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~-~~~-~~~~~~~~~~~----~ 298 (756)
++|+.++++.++. .++++|+||||||.+|+.+|.++|++++++|+++|........ ... .......+... .
T Consensus 86 ~~~~~~~l~~l~~---~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (302)
T 1mj5_A 86 RDYLDALWEALDL---GDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEEL 162 (302)
T ss_dssp HHHHHHHHHHTTC---TTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHH
T ss_pred HHHHHHHHHHhCC---CceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccchhhh
Confidence 9999999999764 1389999999999999999999999999999999876422110 000 00111100000 0
Q ss_pred HHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhh---hhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhc
Q 004396 299 HCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPA---LLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL 375 (756)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 375 (756)
.......+..... ......... +....+...+.. .................... +..........+
T Consensus 163 ~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l 231 (302)
T 1mj5_A 163 VLQDNVFVEQVLP-------GLILRPLSE-AEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPAD---VVAIARDYAGWL 231 (302)
T ss_dssp HTTTCHHHHTHHH-------HTSSSCCCH-HHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHH---HHHHHHHHHHHH
T ss_pred hcChHHHHHHHHH-------hcCcccCCH-HHHHHHHHHhhcccccccchHHHHHhccccccchh---hHHHHHHHHhhh
Confidence 0000000000000 000001111 111111111000 00000000000000000000 011112234677
Q ss_pred cCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 376 ~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
.++++|+|+|+|++|.+++.+. .+.+.+.+++ +++++ ++||++++|+|+++++.|. .|+.+
T Consensus 232 ~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~-~~~~~-~~gH~~~~e~p~~~~~~i~--~fl~~ 292 (302)
T 1mj5_A 232 SESPIPKLFINAEPGALTTGRM-RDFCRTWPNQ-TEITV-AGAHFIQEDSPDEIGAAIA--AFVRR 292 (302)
T ss_dssp TTCCSCEEEEEEEECSSSSHHH-HHHHTTCSSE-EEEEE-EESSCGGGTCHHHHHHHHH--HHHHH
T ss_pred hccCCCeEEEEeCCCCCCChHH-HHHHHHhcCC-ceEEe-cCcCcccccCHHHHHHHHH--HHHHh
Confidence 8999999999999999999985 9999999999 99999 9999999999999999998 45443
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=218.43 Aligned_cols=247 Identities=17% Similarity=0.204 Sum_probs=149.2
Q ss_pred cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHHHH
Q 004396 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFV 228 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv 228 (756)
..+|.. ++|...|+. +++++|||+||++++...|...+..+ .++|+|+++|+||||.| +++++++|+
T Consensus 11 ~~~g~~---l~~~~~g~~-~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~dl 86 (293)
T 1mtz_A 11 KVNGIY---IYYKLCKAP-EEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEA 86 (293)
T ss_dssp EETTEE---EEEEEECCS-SCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHH
T ss_pred EECCEE---EEEEEECCC-CCCCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCCCCCcccHHHHHHHH
Confidence 334544 456666651 12378999999866655554444445 66799999999999988 367889999
Q ss_pred HHHHHHh-hccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhh
Q 004396 229 EETVRRE-HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS 307 (756)
Q Consensus 229 ~~~i~~l-~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (756)
.++++.+ +.. +++|+||||||.+|+.+|.++|++++++|++++........ .........++......+.....
T Consensus 87 ~~~~~~l~~~~----~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 161 (293)
T 1mtz_A 87 EALRSKLFGNE----KVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTV-KEMNRLIDELPAKYRDAIKKYGS 161 (293)
T ss_dssp HHHHHHHHTTC----CEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHH-HHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCC----cEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHH-HHHHHHHHhcCHHHHHHHHHhhc
Confidence 9999998 654 89999999999999999999999999999999865311000 00000000111100000000000
Q ss_pred -hhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHH------HHH-------------
Q 004396 308 -YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLL------KSA------------- 367 (756)
Q Consensus 308 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~------------- 367 (756)
.....+... .....+..... .. ....+ +.+....... ...
T Consensus 162 ~~~~~~~~~~------------~~~~~~~~~~~------~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (293)
T 1mtz_A 162 SGSYENPEYQ------------EAVNYFYHQHL------LR-SEDWP-PEVLKSLEYAERRNVYRIMNGPNEFTITGTIK 221 (293)
T ss_dssp HTCTTCHHHH------------HHHHHHHHHHT------SC-SSCCC-HHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTT
T ss_pred cCCcChHHHH------------HHHHHHHHhhc------cc-ccCch-HHHHHhHhhhccchhhhhccCcceeccccccc
Confidence 000000000 00000000000 00 00000 0000000000 000
Q ss_pred HHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 368 SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 368 ~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.......+.++++|+|+|+|++| .+++. .++.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 222 ~~~~~~~l~~i~~P~lii~G~~D-~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 287 (293)
T 1mtz_A 222 DWDITDKISAIKIPTLITVGEYD-EVTPN-VARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSD 287 (293)
T ss_dssp TCBCTTTGGGCCSCEEEEEETTC-SSCHH-HHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred CCChhhhhccCCCCEEEEeeCCC-CCCHH-HHHHHHHhCCCceEEEeCCCCCCccccCHHHHHHHHHH
Confidence 00012456789999999999999 66777 48999999999999999999999999999999999873
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-23 Score=217.10 Aligned_cols=249 Identities=9% Similarity=0.005 Sum_probs=160.6
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----------ChhHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGL 224 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----------s~~~~ 224 (756)
+++.+|.. ++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++
T Consensus 12 ~~~~~g~~---l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (297)
T 2qvb_A 12 YLEIAGKR---MAYIDEGK----GDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYSYGEQ 84 (297)
T ss_dssp EEEETTEE---EEEEEESS----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHH
T ss_pred EEEECCEE---EEEEecCC----CCeEEEECCCCchHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCCccccCcCHHHH
Confidence 34445655 46666665 68999999999999999999999988899999999999987 46788
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCC-cCC-chhHHhhchhH-HHHh
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQ-LQP-LFPILKAMPDE-LHCA 301 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~-~~~-~~~~~~~~~~~-~~~~ 301 (756)
++|+.++++.++. .++++|+||||||.+|+.+|.++|++++++|+++|........ ... .......+... ....
T Consensus 85 ~~~~~~~l~~~~~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (297)
T 2qvb_A 85 RDFLFALWDALDL---GDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPM 161 (297)
T ss_dssp HHHHHHHHHHTTC---CSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTTHHHH
T ss_pred HHHHHHHHHHcCC---CCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhcccchhh
Confidence 9999999998765 1389999999999999999999999999999999866421110 000 00111100000 0000
Q ss_pred H---HhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHH---------HHHHHH
Q 004396 302 V---PYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKL---------LKSASA 369 (756)
Q Consensus 302 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 369 (756)
. ...+..... ......... +....+...+... ............. +.....
T Consensus 162 ~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (297)
T 2qvb_A 162 ALEHNIFVERVLP-------GAILRQLSD-EEMNHYRRPFVNG---------GEDRRPTLSWPRNLPIDGEPAEVVALVN 224 (297)
T ss_dssp HHTTCHHHHTHHH-------HTCSSCCCH-HHHHHHHGGGCSS---------SGGGHHHHHHHHHSCBTTBSHHHHHHHH
T ss_pred hccccHHHHHHHh-------ccccccCCH-HHHHHHHHHhcCc---------ccchhhHHHHHHhccccCCchhhHHHHH
Confidence 0 000000000 000001111 1111111110000 0000000000000 011112
Q ss_pred HHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 370 YANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 370 ~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
.....+.++++|+|+|+|++|.+++.+. .+.+.+.+++ +++++ ++||++++|+|+++++.|.
T Consensus 225 ~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~-~~~~~-~~gH~~~~~~p~~~~~~i~ 286 (297)
T 2qvb_A 225 EYRSWLEETDMPKLFINAEPGAIITGRI-RDYVRSWPNQ-TEITV-PGVHFVQEDSPEEIGAAIA 286 (297)
T ss_dssp HHHHHHHHCCSCEEEEEEEECSSSCHHH-HHHHHTSSSE-EEEEE-EESSCGGGTCHHHHHHHHH
T ss_pred HHHhhcccccccEEEEecCCCCcCCHHH-HHHHHHHcCC-eEEEe-cCccchhhhCHHHHHHHHH
Confidence 2346678899999999999999999985 9999999999 99999 9999999999999999998
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.91 E-value=9.8e-24 Score=220.64 Aligned_cols=239 Identities=10% Similarity=0.040 Sum_probs=153.5
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhh-HHH-----hHhhhcCCcEEEEeccCCCCCC-----------ChhHHHHHHH
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLG-LIL-----HHKPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVE 229 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~-~~~-----~~~~L~~gy~Vi~~Dl~G~G~S-----------s~~~~a~dv~ 229 (756)
++|...|++..++|+|||+||++++... |.. +++.|+++|+|+++|+||||.| +++++++|+.
T Consensus 23 l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~ 102 (286)
T 2qmq_A 23 VTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIP 102 (286)
T ss_dssp EEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHTTSCEEEEECTTTSTTCCCCCTTCCCCCHHHHHHTHH
T ss_pred EEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhcCCCEEEecCCCCCCCCCCCCCCCCccCHHHHHHHHH
Confidence 5677777643358999999999999885 665 7788888899999999999865 5788999999
Q ss_pred HHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHH-HHhHHhHhhh
Q 004396 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDEL-HCAVPYLLSY 308 (756)
Q Consensus 230 ~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 308 (756)
++++.+... +++|+||||||.+|+.+|.++|++++++|++++..... ............. .......+..
T Consensus 103 ~~l~~l~~~----~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 173 (286)
T 2qmq_A 103 CILQYLNFS----TIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAK-----GWMDWAAHKLTGLTSSIPDMILGH 173 (286)
T ss_dssp HHHHHHTCC----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCC-----CHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHhCCC----cEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCccc-----chhhhhhhhhccccccchHHHHHH
Confidence 999997654 89999999999999999999999999999999865321 1111100000000 0000000000
Q ss_pred hcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHH--HhhhccCCCCcEEEEE
Q 004396 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY--ANSRLHAVKAEVLVLA 386 (756)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~i~~PvLvI~ 386 (756)
...... . ... ....+.+...+. ..............+...... ....+.++++|+|+|+
T Consensus 174 ~~~~~~------~-~~~--~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 234 (286)
T 2qmq_A 174 LFSQEE------L-SGN--SELIQKYRGIIQ----------HAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVV 234 (286)
T ss_dssp HSCHHH------H-HTT--CHHHHHHHHHHH----------TCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEE
T ss_pred HhcCCC------C-Ccc--hHHHHHHHHHHH----------hcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEe
Confidence 000000 0 000 000111111000 001111111111111100000 0145678999999999
Q ss_pred eCCCCCCCCHHHHHHHHHhCC-CeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 387 SGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 387 G~~D~~vp~~~~~~~l~~~l~-~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|++|.+++ . ..+.+.+..+ ++++++++++||++++|+|+++++.|.+
T Consensus 235 G~~D~~~~-~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 282 (286)
T 2qmq_A 235 GDQAPHED-A-VVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKY 282 (286)
T ss_dssp ETTSTTHH-H-HHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHHH
T ss_pred cCCCcccc-H-HHHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHHHH
Confidence 99999998 4 3677777777 8999999999999999999999999883
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-24 Score=224.40 Aligned_cols=237 Identities=15% Similarity=0.159 Sum_probs=156.4
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHH-HhHhhh-cCCcEEEEeccCCCCCC------ChhHHHHHHHHHHHHhhcc
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLI-LHHKPL-GKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHAS 238 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~-~~~~~L-~~gy~Vi~~Dl~G~G~S------s~~~~a~dv~~~i~~l~~~ 238 (756)
++|...|+ +|+|||+||++++...|. .+++.| +++|+|+++|+||||.| +++++++|+.++++.++.+
T Consensus 35 l~y~~~g~----~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~l~~l~~~ 110 (293)
T 3hss_A 35 LAYDDNGT----GDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEGFTTQTMVADTAALIETLDIA 110 (293)
T ss_dssp EEEEEECS----SEEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEECCTTSGGGTTCCSCCHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEcCC----CCEEEEECCCCCchhhcchhhhhhHhhcCCeEEEEccCCCCCCCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 57777775 789999999999999998 677777 78999999999999987 6899999999999997654
Q ss_pred CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhH-HH
Q 004396 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIK-MA 317 (756)
Q Consensus 239 ~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 317 (756)
+++|+||||||.+|+.+|.++|++++++|+++|....... ........ ..+.......+.. ..
T Consensus 111 ----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-----~~~~~~~~-------~~~~~~~~~~~~~~~~ 174 (293)
T 3hss_A 111 ----PARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRA-----RQFFNKAE-------AELYDSGVQLPPTYDA 174 (293)
T ss_dssp ----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHH-----HHHHHHHH-------HHHHHHTCCCCHHHHH
T ss_pred ----cEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChh-----hhHHHHHH-------HHHHhhcccchhhHHH
Confidence 8999999999999999999999999999999986533110 00000000 0000000000000 00
Q ss_pred HHhhhcCCCh-----HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCC
Q 004396 318 MVNIENRLPP-----RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNM 392 (756)
Q Consensus 318 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~ 392 (756)
.......... ......+...... ................ ........+.++++|+|+|+|++|.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~P~lii~g~~D~~ 244 (293)
T 3hss_A 175 RARLLENFSRKTLNDDVAVGDWIAMFSM--------WPIKSTPGLRCQLDCA--PQTNRLPAYRNIAAPVLVIGFADDVV 244 (293)
T ss_dssp HHHHHHHSCHHHHTCHHHHHHHHHHHHH--------SCCCCCHHHHHHHTSS--CSSCCHHHHTTCCSCEEEEEETTCSS
T ss_pred HHHHhhhcccccccccccHHHHHHHHhh--------ccccccHHHHhHhhhc--cccchHHHHhhCCCCEEEEEeCCCCC
Confidence 0000000000 0000000000000 0000000000000000 00001245688999999999999999
Q ss_pred CCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 393 LPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 393 vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
++.+. .+.+.+.++++++++++++||++++|+|+++++.|.
T Consensus 245 ~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 285 (293)
T 3hss_A 245 TPPYL-GREVADALPNGRYLQIPDAGHLGFFERPEAVNTAML 285 (293)
T ss_dssp SCHHH-HHHHHHHSTTEEEEEETTCCTTHHHHSHHHHHHHHH
T ss_pred CCHHH-HHHHHHHCCCceEEEeCCCcchHhhhCHHHHHHHHH
Confidence 99995 999999999999999999999999999999999998
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-23 Score=222.21 Aligned_cols=110 Identities=17% Similarity=0.221 Sum_probs=95.1
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCCC-----------hhHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRTP-----------FEGL 224 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~Ss-----------~~~~ 224 (756)
...+|.. ++|...|+ +|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+ ++++
T Consensus 16 ~~~~g~~---l~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 88 (328)
T 2cjp_A 16 VAVNGLN---MHLAELGE----GPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHL 88 (328)
T ss_dssp EEETTEE---EEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGGSHHHH
T ss_pred ecCCCcE---EEEEEcCC----CCEEEEECCCCCchHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCcccccHHHH
Confidence 3445554 46666675 6899999999999999999999995 58999999999999872 5678
Q ss_pred HHHHHHHHHHhh--ccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 225 VKFVEETVRREH--ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 225 a~dv~~~i~~l~--~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
++|+.++++.++ .. +++|+||||||.+|+.+|.++|++|+++|+++++.
T Consensus 89 a~dl~~~l~~l~~~~~----~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~ 139 (328)
T 2cjp_A 89 VGDVVALLEAIAPNEE----KVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHF 139 (328)
T ss_dssp HHHHHHHHHHHCTTCS----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HHHHHHHHHHhcCCCC----CeEEEEECHHHHHHHHHHHhChhheeEEEEEccCC
Confidence 999999999986 44 89999999999999999999999999999998754
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=224.43 Aligned_cols=129 Identities=21% Similarity=0.273 Sum_probs=99.9
Q ss_pred CccHHHHHHhhcccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcC--CcEEEEeccCCCCCC-
Q 004396 143 TDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRT- 219 (756)
Q Consensus 143 ~~~~~~y~~~~~~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~--gy~Vi~~Dl~G~G~S- 219 (756)
...|+.++.+.+.+...++.-...++|...|. ++|+|||+||++++...|..+++.|++ +|+|+++|+||||.|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~p~lvllHG~~~~~~~w~~~~~~L~~~~~~~via~Dl~GhG~S~ 81 (316)
T 3c5v_A 5 PVPWSQYFESMEDVEVENETGKDTFRVYKSGS---EGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETK 81 (316)
T ss_dssp CCCGGGTCSEEEEEEEEETTEEEEEEEEEECS---SSCEEEEECCTTCCGGGGHHHHHHHHTTBCCEEEEECCTTSTTCB
T ss_pred cCccccccCccceEEecCCcceEEEEEEecCC---CCcEEEEECCCCcccccHHHHHHHHhhcCCeEEEEecCCCCCCCC
Confidence 34455666555554433321001245555554 378999999999999999999999987 899999999999988
Q ss_pred -------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh--CCCcceEEEEeCCC
Q 004396 220 -------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPA 276 (756)
Q Consensus 220 -------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~--~P~~v~~lVLi~p~ 276 (756)
+++++++|+.++++.+.... .++++|+||||||.+|+.+|.+ +|+ ++++|++++.
T Consensus 82 ~~~~~~~~~~~~a~dl~~~l~~l~~~~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 82 VKNPEDLSAETMAKDVGNVVEAMYGDL-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV 145 (316)
T ss_dssp CSCTTCCCHHHHHHHHHHHHHHHHTTC-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred CCCccccCHHHHHHHHHHHHHHHhccC-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence 47899999999999984321 1389999999999999999996 577 9999999874
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=205.79 Aligned_cols=225 Identities=16% Similarity=0.165 Sum_probs=153.9
Q ss_pred eeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC------ChhHHHHHHHHHH------HHh
Q 004396 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKFVEETV------RRE 235 (756)
Q Consensus 168 ~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S------s~~~~a~dv~~~i------~~l 235 (756)
+|...|.+ +++|+|||+||++++...|. .+..|.++|+|+++|+||||.| +++++++|+.+++ +.+
T Consensus 6 ~y~~~g~~-~~~~~vv~~hG~~~~~~~~~-~~~~l~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (245)
T 3e0x_A 6 HYVHVGNK-KSPNTLLFVHGSGCNLKIFG-ELEKYLEDYNCILLDLKGHGESKGQCPSTVYGYIDNVANFITNSEVTKHQ 83 (245)
T ss_dssp CEEEEECT-TCSCEEEEECCTTCCGGGGT-TGGGGCTTSEEEEECCTTSTTCCSCCCSSHHHHHHHHHHHHHHCTTTTTC
T ss_pred EEEecCCC-CCCCEEEEEeCCcccHHHHH-HHHHHHhCCEEEEecCCCCCCCCCCCCcCHHHHHHHHHHHHHhhhhHhhc
Confidence 44444442 34789999999999999999 8899999999999999999998 5899999999999 543
Q ss_pred hccCCCCCEEEEEeChhhHHHHHHHHh-CCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChh
Q 004396 236 HASSPEKPIYLVGDSFGGCLALAVAAR-NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPI 314 (756)
Q Consensus 236 ~~~~~~~~v~LvGhS~GG~vAl~~A~~-~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (756)
. +++|+||||||.+|+.+|.+ +|+ ++++|+++|......... .....+... .....+..
T Consensus 84 ~------~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~------ 143 (245)
T 3e0x_A 84 K------NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDK----DFMEKIYHN---QLDNNYLL------ 143 (245)
T ss_dssp S------CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCH----HHHHHHHTT---CCCHHHHH------
T ss_pred C------ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccH----HHHHHHHHH---HHHhhcCc------
Confidence 2 89999999999999999999 999 999999999764421110 011100000 00000000
Q ss_pred HHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCC
Q 004396 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLP 394 (756)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp 394 (756)
........ .........+. ............. ...+....+.++++|+++++|++|.+++
T Consensus 144 ----~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 203 (245)
T 3e0x_A 144 ----ECIGGIDN--PLSEKYFETLE------------KDPDIMINDLIAC--KLIDLVDNLKNIDIPVKAIVAKDELLTL 203 (245)
T ss_dssp ----HHHTCSCS--HHHHHHHTTSC------------SSHHHHHHHHHHH--HHCBCGGGGGGCCSCEEEEEETTCSSSC
T ss_pred ----ccccccch--HHHHHHHHHHh------------cCcHHHHHHHHHh--ccccHHHHHHhCCCCEEEEEeCCCCCCC
Confidence 00000000 00111111000 0111111111111 1111235678899999999999999999
Q ss_pred CHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 395 SEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 395 ~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.+. .+.+.+.++++++++++++||+++.++|+++++.|.+
T Consensus 204 ~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 243 (245)
T 3e0x_A 204 VEY-SEIIKKEVENSELKIFETGKHFLLVVNAKGVAEEIKN 243 (245)
T ss_dssp HHH-HHHHHHHSSSEEEEEESSCGGGHHHHTHHHHHHHHHT
T ss_pred HHH-HHHHHHHcCCceEEEeCCCCcceEEecHHHHHHHHHh
Confidence 995 9999999999999999999999999999999998873
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-23 Score=214.38 Aligned_cols=232 Identities=10% Similarity=0.041 Sum_probs=148.3
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvG 248 (756)
++|+|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++|+.++++++. ..++++|+|
T Consensus 11 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~---~~~~~~lvG 87 (267)
T 3sty_A 11 VKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLP---ANEKIILVG 87 (267)
T ss_dssp CCCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTSC---TTSCEEEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhcC---CCCCEEEEE
Confidence 57899999999999999999999995 4799999999999988 58889999999999863 234899999
Q ss_pred eChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhh----------hhcCChhHHHH
Q 004396 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS----------YVMGDPIKMAM 318 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 318 (756)
|||||.+|+.+|.++|++++++|++++........ ...................+. .....+. ...
T Consensus 88 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 163 (267)
T 3sty_A 88 HALGGLAISKAMETFPEKISVAVFLSGLMPGPNID---ATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPK-FLA 163 (267)
T ss_dssp ETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBC---HHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHH-HHH
T ss_pred EcHHHHHHHHHHHhChhhcceEEEecCCCCCCcch---HHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhHH-HHH
Confidence 99999999999999999999999999866332211 111111110000000000000 0000000 000
Q ss_pred HhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHH
Q 004396 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398 (756)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~ 398 (756)
......... .......... ......... .+.. ..........++|+++|+|++|.+++++.
T Consensus 164 ~~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~~----~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~- 224 (267)
T 3sty_A 164 TNVYHLSPI-EDLALATALV-----------RPLYLYLAE----DISK--EVVLSSKRYGSVKRVFIVATENDALKKEF- 224 (267)
T ss_dssp HHTSTTSCH-HHHHHHHHHC-----------CCEECCCHH----HHHH--HCCCCTTTGGGSCEEEEECCCSCHHHHHH-
T ss_pred HhhcccCCH-HHHHHHHHhh-----------ccchhHHHH----Hhhc--chhcccccccCCCEEEEEeCCCCccCHHH-
Confidence 000000000 0000000000 000000000 0000 00001112226999999999999999995
Q ss_pred HHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 399 AKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 399 ~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 225 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 261 (267)
T 3sty_A 225 LKLMIEKNPPDEVKEIEGSDHVTMMSKPQQLFTTLLS 261 (267)
T ss_dssp HHHHHHHSCCSEEEECTTCCSCHHHHSHHHHHHHHHH
T ss_pred HHHHHHhCCCceEEEeCCCCccccccChHHHHHHHHH
Confidence 9999999999999999999999999999999999983
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.7e-23 Score=211.81 Aligned_cols=208 Identities=16% Similarity=0.216 Sum_probs=146.0
Q ss_pred CCCEEEEECCCCCc--hhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCCCCCEEEE
Q 004396 178 GSPTLLFLPGIDGL--GLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG~~~s--~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~Lv 247 (756)
++|+|||+||++++ ...|..+++.| ..+|+|+++|+||||.| +++++++|+.++++.+......++++|+
T Consensus 26 ~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lv 105 (251)
T 2wtm_A 26 KCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMA 105 (251)
T ss_dssp SEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcccceEEEE
Confidence 46889999999999 88899999999 56899999999999988 3677899999999988643223489999
Q ss_pred EeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCCh
Q 004396 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (756)
||||||.+|+.+|.++|++++++|+++|...... ..... ...... .++ ...+.
T Consensus 106 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-------~~~~~----------~~~~~~-~~~---------~~~~~ 158 (251)
T 2wtm_A 106 GHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPE-------IARTG----------ELLGLK-FDP---------ENIPD 158 (251)
T ss_dssp EETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHH-------HHHHT----------EETTEE-CBT---------TBCCS
T ss_pred EECcchHHHHHHHHhCcccceEEEEECcHHHhHH-------HHhhh----------hhcccc-CCc---------hhcch
Confidence 9999999999999999999999999998542100 00000 000000 000 00000
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC
Q 004396 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (756)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~ 407 (756)
....+.. . ... ..+ ...... .+....+.++++|+|+|+|++|.++|.+. ++.+.+.++
T Consensus 159 --~~~~~~~-------~------~~~-~~~---~~~~~~--~~~~~~~~~i~~P~lii~G~~D~~v~~~~-~~~~~~~~~ 216 (251)
T 2wtm_A 159 --ELDAWDG-------R------KLK-GNY---VRVAQT--IRVEDFVDKYTKPVLIVHGDQDEAVPYEA-SVAFSKQYK 216 (251)
T ss_dssp --EEEETTT-------E------EEE-THH---HHHHTT--CCHHHHHHHCCSCEEEEEETTCSSSCHHH-HHHHHHHSS
T ss_pred --HHhhhhc-------c------ccc-hHH---HHHHHc--cCHHHHHHhcCCCEEEEEeCCCCCcChHH-HHHHHHhCC
Confidence 0000000 0 000 000 000000 00124456789999999999999999995 999999999
Q ss_pred CeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 408 NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 408 ~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++++++++++||++ .|+|+++++.|.+
T Consensus 217 ~~~~~~~~~~gH~~-~~~~~~~~~~i~~ 243 (251)
T 2wtm_A 217 NCKLVTIPGDTHCY-DHHLELVTEAVKE 243 (251)
T ss_dssp SEEEEEETTCCTTC-TTTHHHHHHHHHH
T ss_pred CcEEEEECCCCccc-chhHHHHHHHHHH
Confidence 99999999999999 9999999998873
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.7e-23 Score=215.24 Aligned_cols=243 Identities=15% Similarity=0.121 Sum_probs=152.0
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC------------ChhHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------------PFEGL 224 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S------------s~~~~ 224 (756)
+..+|.. ++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +.+++
T Consensus 10 ~~~~~~~---~~~~~~g~----g~~~vllHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~ 82 (291)
T 3qyj_A 10 VDTTEAR---INLVKAGH----GAPLLLLHGYPQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHINYSKRVM 82 (291)
T ss_dssp EECSSCE---EEEEEECC----SSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCCCCGGGGGGSHHHH
T ss_pred EecCCeE---EEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccccccCHHHH
Confidence 3445555 57777776 78999999999999999999999999999999999999988 35677
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHH-HHhHH
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDEL-HCAVP 303 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 303 (756)
++|+.++++.++.. +++|+||||||.+|+.+|.++|++++++|++++..... ......... .....
T Consensus 83 ~~~~~~~~~~l~~~----~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~---------~~~~~~~~~~~~~~~ 149 (291)
T 3qyj_A 83 AQDQVEVMSKLGYE----QFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHK---------MYRTTDQEFATAYYH 149 (291)
T ss_dssp HHHHHHHHHHTTCS----SEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHH---------HHHTCCHHHHHHTTH
T ss_pred HHHHHHHHHHcCCC----CEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcch---------hhhcchhhhhHHHHH
Confidence 88999999886654 89999999999999999999999999999998753210 000000000 00000
Q ss_pred hHhh--------h-hcCChhHHHHHhhh------cCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH--
Q 004396 304 YLLS--------Y-VMGDPIKMAMVNIE------NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS-- 366 (756)
Q Consensus 304 ~~~~--------~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 366 (756)
..+. . ...++......... ....+ +....+...+ ............++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~ 215 (291)
T 3qyj_A 150 WFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHP-QALAEYIRCF-------------SQPAVIHATCEDYRAAA 215 (291)
T ss_dssp HHHTTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCH-HHHHHHHHHH-------------TSHHHHHHHHHHHHHHT
T ss_pred HHHhccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCH-HHHHHHHHHh-------------cCCCcchhHHHHHHccc
Confidence 0000 0 00000000000000 00000 0000000000 001111111111111
Q ss_pred ---HHHHHhhhccCCCCcEEEEEeCCCCCCCC-HHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 367 ---ASAYANSRLHAVKAEVLVLASGKDNMLPS-EDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 367 ---~~~~~~~~l~~i~~PvLvI~G~~D~~vp~-~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
........+.++++|+|+|+|++|.+.+. . ......+..++++..+++ +||++++|+|+++++.|.+
T Consensus 216 ~~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~-~GH~~~~E~P~~v~~~i~~ 286 (291)
T 3qyj_A 216 TIDLEHDELDMKQKISCPVLVLWGEKGIIGRKYD-VLATWRERAIDVSGQSLP-CGHFLPEEAPEETYQAIYN 286 (291)
T ss_dssp THHHHHHHTTTTCCBCSCEEEEEETTSSHHHHSC-HHHHHHTTBSSEEEEEES-SSSCHHHHSHHHHHHHHHH
T ss_pred ccchhhcchhcCCccccceEEEecccccccchhh-HHHHHHhhcCCcceeecc-CCCCchhhCHHHHHHHHHH
Confidence 11112245788999999999999976432 2 245556667888988886 8999999999999999984
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-23 Score=220.65 Aligned_cols=248 Identities=12% Similarity=0.082 Sum_probs=160.4
Q ss_pred cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHHHH
Q 004396 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEE 230 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~ 230 (756)
..+|.. ++|...|. +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+
T Consensus 54 ~~~~~~---~~~~~~g~----~p~vv~lhG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~dl~~ 126 (314)
T 3kxp_A 54 DIGRIT---LNVREKGS----GPLMLFFHGITSNSAVFEPLMIRLSDRFTTIAVDQRGHGLSDKPETGYEANDYADDIAG 126 (314)
T ss_dssp ECSSCE---EEEEEECC----SSEEEEECCTTCCGGGGHHHHHTTTTTSEEEEECCTTSTTSCCCSSCCSHHHHHHHHHH
T ss_pred EECCEE---EEEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHcCCeEEEEeCCCcCCCCCCCCCCCHHHHHHHHHH
Confidence 345555 35555555 78999999999999999999999988899999999999998 58999999999
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhc
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (756)
+++++... +++|+||||||.+++.+|.++|++++++|+++|...................+... .........+
T Consensus 127 ~l~~l~~~----~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 200 (314)
T 3kxp_A 127 LIRTLARG----HAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLF-EDIKAVEAYL- 200 (314)
T ss_dssp HHHHHTSS----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCB-SSHHHHHHHH-
T ss_pred HHHHhCCC----CcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhh-cCHHHHHHHH-
Confidence 99997654 89999999999999999999999999999999865321111000000000000000 0000000000
Q ss_pred CChhHHHHHhhhcCCChHHHHHHHHh-hhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCC
Q 004396 311 GDPIKMAMVNIENRLPPRIKLEQLSN-NLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGK 389 (756)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~ 389 (756)
......... ........ .+.... .......... ................+.++++|+|+++|++
T Consensus 201 --------~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~ 265 (314)
T 3kxp_A 201 --------AGRYPNIPA-DAIRIRAESGYQPVD---GGLRPLASSA---AMAQTARGLRSDLVPAYRDVTKPVLIVRGES 265 (314)
T ss_dssp --------HHHSTTSCH-HHHHHHHHHSEEEET---TEEEESSCHH---HHHHHHHHTTSCCHHHHHHCCSCEEEEEETT
T ss_pred --------HhhcccCch-HHHHHHhhhhhcccc---cccccccChh---hhhhhccccCcchhhHhhcCCCCEEEEecCC
Confidence 000000111 01111111 000000 0000000110 0000000000012345678999999999999
Q ss_pred CCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 390 DNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 390 D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
|.+++.+. .+.+.+.++++++++++++||+++.|+|+.+++.|.
T Consensus 266 D~~~~~~~-~~~~~~~~~~~~~~~~~g~gH~~~~e~~~~~~~~i~ 309 (314)
T 3kxp_A 266 SKLVSAAA-LAKTSRLRPDLPVVVVPGADHYVNEVSPEITLKAIT 309 (314)
T ss_dssp CSSSCHHH-HHHHHHHCTTSCEEEETTCCSCHHHHCHHHHHHHHH
T ss_pred CccCCHHH-HHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHH
Confidence 99999995 999999999999999999999999999999999887
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-23 Score=221.97 Aligned_cols=246 Identities=16% Similarity=0.145 Sum_probs=156.1
Q ss_pred cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC--------ChhHHHHHHH
Q 004396 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVE 229 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~ 229 (756)
..+++. ++|...|. ++|+|||+||++++...|..+++.| +|+|+++|+||||.| +++++++|+.
T Consensus 66 ~~~~~~---~~~~~~g~---~~~~vv~~hG~~~~~~~~~~~~~~l--g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~ 137 (330)
T 3p2m_A 66 RVQAGA---ISALRWGG---SAPRVIFLHGGGQNAHTWDTVIVGL--GEPALAVDLPGHGHSAWREDGNYSPQLNSETLA 137 (330)
T ss_dssp EEEETT---EEEEEESS---SCCSEEEECCTTCCGGGGHHHHHHS--CCCEEEECCTTSTTSCCCSSCBCCHHHHHHHHH
T ss_pred eecCce---EEEEEeCC---CCCeEEEECCCCCccchHHHHHHHc--CCeEEEEcCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 344555 45555565 3788999999999999999999998 899999999999988 4789999999
Q ss_pred HHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhh
Q 004396 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYV 309 (756)
Q Consensus 230 ~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (756)
++++.++.. +++|+||||||.+|+.+|.++|++|+++|+++|........ ................ ...
T Consensus 138 ~~l~~l~~~----~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~ 206 (330)
T 3p2m_A 138 PVLRELAPG----AEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRH-----AELTAEQRGTVALMHG--ERE 206 (330)
T ss_dssp HHHHHSSTT----CCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHH-----HHHTCC-------------CC
T ss_pred HHHHHhCCC----CcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhh-----hhhhhhhhhhhhhhcC--Ccc
Confidence 999997654 89999999999999999999999999999999854210000 0000000000000000 000
Q ss_pred cCChhHHHHHh--hhcCCChHHHHHHHHhhhhhhhhh-hhhhhccC-ChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEE
Q 004396 310 MGDPIKMAMVN--IENRLPPRIKLEQLSNNLPALLPR-LSVMSDII-PKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (756)
Q Consensus 310 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI 385 (756)
........... .............+.......... +....... ..... ......+.++++|+|+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~i~~PvLii 275 (330)
T 3p2m_A 207 FPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDF-----------AGLWDDVDALSAPITLV 275 (330)
T ss_dssp BSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCH-----------HHHHHHHHHCCSCEEEE
T ss_pred ccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCcccc-----------HHHHHHHhhCCCCEEEE
Confidence 00000000000 000000001111111100000000 00000000 00000 01124567889999999
Q ss_pred EeCCCCCCCCHHHHHHHHHhCCCeE-EEEEcCCCCcccccchhhHHHHhh
Q 004396 386 ASGKDNMLPSEDEAKRLNNSLQNCI-VRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 386 ~G~~D~~vp~~~~~~~l~~~l~~~~-l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
+|++|.+++.+. ++.+.+.+++++ +++++++||++++|+|+++++.|.
T Consensus 276 ~G~~D~~v~~~~-~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 324 (330)
T 3p2m_A 276 RGGSSGFVTDQD-TAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVR 324 (330)
T ss_dssp EETTCCSSCHHH-HHHHHHHCSSEEEEEEETTCCSCHHHHCHHHHHHHHH
T ss_pred EeCCCCCCCHHH-HHHHHHhCCCCeeEEEeCCCCCCcchhCHHHHHHHHH
Confidence 999999999995 999999999999 999999999999999999999998
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8.2e-24 Score=218.70 Aligned_cols=237 Identities=13% Similarity=0.140 Sum_probs=154.8
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhh-hcCCcEEEEeccCCCCCC----------ChhHHHHHHHHHHHHh
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKP-LGKAFEVRCLHIPVYDRT----------PFEGLVKFVEETVRRE 235 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~-L~~gy~Vi~~Dl~G~G~S----------s~~~~a~dv~~~i~~l 235 (756)
++|...+. ++|+|||+||++++...|..+++. ++++|+|+++|+||||.| +++++++++.++++.+
T Consensus 15 ~~~~~~~~---~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (279)
T 4g9e_A 15 IAVRESEG---EGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSMEGYADAMTEVMQQL 91 (279)
T ss_dssp EEEEECCC---CEEEEEEECCTTCCGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHSSHHHHHHHHHHHHHHH
T ss_pred EEEEecCC---CCCeEEEECCCCCchhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCCCHHHHHHHHHHHHHHh
Confidence 35555554 478999999999999999999999 588999999999999988 4788999999999997
Q ss_pred hccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCc---CCchhHHh-hchhHHHHhHHhHhhhhcC
Q 004396 236 HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQL---QPLFPILK-AMPDELHCAVPYLLSYVMG 311 (756)
Q Consensus 236 ~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 311 (756)
+.. +++|+||||||.+|+.+|.++|+ +.++|+++++........ ........ ...................
T Consensus 92 ~~~----~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (279)
T 4g9e_A 92 GIA----DAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSERDVESYARSTCG 166 (279)
T ss_dssp TCC----CCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHHHHHC
T ss_pred CCC----ceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCcccccHHHHHHHHHhhcc
Confidence 654 89999999999999999999999 888888887653221110 00000000 0000000000000000000
Q ss_pred ChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH-HHHHHhhhccCCCCcEEEEEeCCC
Q 004396 312 DPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS-ASAYANSRLHAVKAEVLVLASGKD 390 (756)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLvI~G~~D 390 (756)
.. . .......+.. ............+.. ........+.++++|+|+|+|++|
T Consensus 167 ~~-----------~-~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 219 (279)
T 4g9e_A 167 EP-----------F-EASLLDIVAR---------------TDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDE 219 (279)
T ss_dssp SS-----------C-CHHHHHHHHH---------------SCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTC
T ss_pred Cc-----------c-cHHHHHHHHh---------------hhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCC
Confidence 00 0 0000000000 000011111111100 000112456788999999999999
Q ss_pred CCCCCHHHHHHHH-HhCCCeEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 391 NMLPSEDEAKRLN-NSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 391 ~~vp~~~~~~~l~-~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
.+++.+. .+.+. +.++++++++++++||++++|+|+++++.|. .|+++
T Consensus 220 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~ 268 (279)
T 4g9e_A 220 PFVELDF-VSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYLA--RFIRD 268 (279)
T ss_dssp SSBCHHH-HTTCCCSSBGGGSCEEETTCCSCHHHHSHHHHHHHHH--HHHHH
T ss_pred cccchHH-HHHHhhccCCCCeEEEECCCCcchHHhCHHHHHHHHH--HHHHH
Confidence 9999985 77777 7778999999999999999999999999998 55544
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-23 Score=224.11 Aligned_cols=272 Identities=14% Similarity=0.080 Sum_probs=161.0
Q ss_pred cccCCCCCc-eeeeeccCCCCC-CCCCEEEEECCCCCchhh-------------HHHhH---hhh-cCCcEEEEeccCCC
Q 004396 156 IIKPDGGPP-RWFCPVDCGRPL-KGSPTLLFLPGIDGLGLG-------------LILHH---KPL-GKAFEVRCLHIPVY 216 (756)
Q Consensus 156 ~~~~dg~~~-~~~~~~~~G~~~-~~~p~lV~lHG~~~s~~~-------------~~~~~---~~L-~~gy~Vi~~Dl~G~ 216 (756)
+...+|... .-++|...|.+. +++|+|||+||++++... |..++ +.| +++|+|+++|+|||
T Consensus 17 ~~~~~g~~l~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~ 96 (377)
T 3i1i_A 17 YTFENGRTIPVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCN 96 (377)
T ss_dssp EECTTSCEEEEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTC
T ss_pred eeecCCCEeeeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEeccccc
Confidence 444444432 224666666542 246899999999999877 88777 666 67999999999999
Q ss_pred CCC----------------------------ChhHHHHHHHHHHHHhhccCCCCCEE-EEEeChhhHHHHHHHHhCCCcc
Q 004396 217 DRT----------------------------PFEGLVKFVEETVRREHASSPEKPIY-LVGDSFGGCLALAVAARNPTID 267 (756)
Q Consensus 217 G~S----------------------------s~~~~a~dv~~~i~~l~~~~~~~~v~-LvGhS~GG~vAl~~A~~~P~~v 267 (756)
|.| +++++++|+.+++++++.. +++ |+||||||.+|+.+|.++|++|
T Consensus 97 G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~----~~~ilvGhS~Gg~ia~~~a~~~p~~v 172 (377)
T 3i1i_A 97 VQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIA----RLHAVMGPSAGGMIAQQWAVHYPHMV 172 (377)
T ss_dssp SCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCC----CBSEEEEETHHHHHHHHHHHHCTTTB
T ss_pred ccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCC----cEeeEEeeCHhHHHHHHHHHHChHHH
Confidence 651 4689999999999987655 775 9999999999999999999999
Q ss_pred eEEEE-eCCCCcCCcCCcCCch---hHHhhchhHHH-----------HhHHhHhhhh-cCChhHHHHHhhhcCCCh----
Q 004396 268 LILIL-SNPATSFGRSQLQPLF---PILKAMPDELH-----------CAVPYLLSYV-MGDPIKMAMVNIENRLPP---- 327 (756)
Q Consensus 268 ~~lVL-i~p~~~~~~~~~~~~~---~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---- 327 (756)
+++|+ +++............. ......+.... .......... ...+..+ ...+......
T Consensus 173 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 251 (377)
T 3i1i_A 173 ERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFY-ETTYPRNSIEVEPY 251 (377)
T ss_dssp SEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHH-HHHSCCCSSCCGGG
T ss_pred HHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHH-HHHhhhhhcccccc
Confidence 99999 7664421100000000 00000000000 0000000000 0000000 0000000000
Q ss_pred -----HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHH-----HHHhhhccCCCCcEEEEEeCCCCCCCCHH
Q 004396 328 -----RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS-----AYANSRLHAVKAEVLVLASGKDNMLPSED 397 (756)
Q Consensus 328 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLvI~G~~D~~vp~~~ 397 (756)
....+.+..... ...........+......+.... ......+.++++|+|+|+|++|.+++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~ 325 (377)
T 3i1i_A 252 EKVSSLTSFEKEINKLT------YRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRY 325 (377)
T ss_dssp TCTTCCCHHHHHHHHHH------HHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHH
T ss_pred ccccchhHHHHHHHHHH------hhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHH
Confidence 000000000000 00011111222222222221110 01135678899999999999999999995
Q ss_pred HHHHHHHhC----CCeEEEEEcC-CCCcccccchhhHHHHhhhcccccc
Q 004396 398 EAKRLNNSL----QNCIVRNFKD-NGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 398 ~~~~l~~~l----~~~~l~~i~~-aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
++.+.+.+ ++++++++++ +||++++|+|+++++.|. .|+.+
T Consensus 326 -~~~~~~~~~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~--~fl~~ 371 (377)
T 3i1i_A 326 -NYKMVDLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVY--EFLNR 371 (377)
T ss_dssp -HHHHHHHHHHTTCCEEECCBCCTTGGGHHHHCGGGTHHHHH--HHHHS
T ss_pred -HHHHHHHHHhcCCCceEEEcCCCCCCcchhcCHHHHHHHHH--HHHHh
Confidence 99999999 9999999998 999999999999999998 44443
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=214.00 Aligned_cols=236 Identities=13% Similarity=0.122 Sum_probs=154.8
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCC-CCC-------ChhHHHHHHHHHHHHhhccCCCCCEEEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVY-DRT-------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~-G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~LvG 248 (756)
++|+|||+||++++...|..+++.|+ ++|+|+++|+||| |.| +++++++|+.++++.+.. .+..+++|+|
T Consensus 34 ~~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~~~~lvG 112 (305)
T 1tht_A 34 KNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQT-KGTQNIGLIA 112 (305)
T ss_dssp CSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------CCCHHHHHHHHHHHHHHHHH-TTCCCEEEEE
T ss_pred CCCEEEEecCCccCchHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCcccceehHHHHHHHHHHHHHHHh-CCCCceEEEE
Confidence 47899999999999999999999995 6899999999999 987 467889999999887752 2345899999
Q ss_pred eChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChH
Q 004396 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (756)
|||||.+|+.+|.+ | ++.++|++++.... .... .. .... ....... .....
T Consensus 113 hSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~--------~~~~---~~----~~~~---~~~~~~~--------~~~~~- 163 (305)
T 1tht_A 113 ASLSARVAYEVISD-L-ELSFLITAVGVVNL--------RDTL---EK----ALGF---DYLSLPI--------DELPN- 163 (305)
T ss_dssp ETHHHHHHHHHTTT-S-CCSEEEEESCCSCH--------HHHH---HH----HHSS---CGGGSCG--------GGCCS-
T ss_pred ECHHHHHHHHHhCc-c-CcCEEEEecCchhH--------HHHH---HH----Hhhh---hhhhcch--------hhCcc-
Confidence 99999999999998 7 89999998864311 0000 00 0000 0000000 00000
Q ss_pred HHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH---HHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q 004396 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS---ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405 (756)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~ 405 (756)
..... ..... ...+....... ........+.++++|+|+|+|++|.++|++. ++.+.+.
T Consensus 164 -----~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~-~~~l~~~ 225 (305)
T 1tht_A 164 -----DLDFE----------GHKLG--SEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEE-VYDMLAH 225 (305)
T ss_dssp -----EEEET----------TEEEE--HHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHH-HHHHHTT
T ss_pred -----ccccc----------ccccC--HHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHH-HHHHHHh
Confidence 00000 00000 00000000000 0001135678899999999999999999995 8999987
Q ss_pred C--CCeEEEEEcCCCCcccccchhhHHHHhhhc-ccc--ccCcCcccccccCCCCHHHHHHH
Q 004396 406 L--QNCIVRNFKDNGHTLLLEEGISLLTIIKGT-CKY--RRSRKLDSVADFLPPSRQEFKYA 462 (756)
Q Consensus 406 l--~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~-~f~--rr~~~~~~v~d~~pPs~~e~~~~ 462 (756)
+ +++++++++++||.++ |+|+.+.+.+.+. .+. -.....+.+.+|..|+.+++-.+
T Consensus 226 i~~~~~~l~~i~~agH~~~-e~p~~~~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (305)
T 1tht_A 226 IRTGHCKLYSLLGSSHDLG-ENLVVLRNFYQSVTKAAIAMDGGSLEIDVDFIEPDFEQLTIA 286 (305)
T ss_dssp CTTCCEEEEEETTCCSCTT-SSHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCHHHHHHH
T ss_pred cCCCCcEEEEeCCCCCchh-hCchHHHHHHHHHHHHHHHhCcccchhhhhhhccchHhhccc
Confidence 7 4789999999999996 8998776666543 221 12345567889999998877554
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.2e-23 Score=212.70 Aligned_cols=228 Identities=18% Similarity=0.175 Sum_probs=137.7
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++.+... ..+++|+|||
T Consensus 15 ~~~~vvllHG~~~~~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~~~~~~~~a~~l~~~l~~l~~~--~~p~~lvGhS 92 (264)
T 1r3d_A 15 RTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQAHVTS--EVPVILVGYS 92 (264)
T ss_dssp TBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHHHTTCCT--TSEEEEEEET
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHhcccCceEEEecCCCCCCCCCCCccCHHHHHHHHHHHHHHhCcC--CCceEEEEEC
Confidence 45899999999999999999999997 8999999999999998 4788999999999986543 1149999999
Q ss_pred hhhHHHHH---HHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHH----hHHhHhhhhcCChhHHHHHhhhc
Q 004396 251 FGGCLALA---VAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHC----AVPYLLSYVMGDPIKMAMVNIEN 323 (756)
Q Consensus 251 ~GG~vAl~---~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 323 (756)
|||.+|+. +|.++|++++++|++++........ ........ ....... .....+..+.... ...
T Consensus 93 mGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 163 (264)
T 1r3d_A 93 LGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENE-EKAARWQH-DQQWAQRFSQQPIEHVLSDWYQQA-------VFS 163 (264)
T ss_dssp HHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHH-HHHHHHHH-HHHHHHHHHHSCHHHHHHHHTTSG-------GGT
T ss_pred HhHHHHHHHHHHHhhCccccceEEEecCCCCCCChh-hhhhhhcc-cHHHHHHhccccHHHHHHHHhhhh-------hhh
Confidence 99999999 8889999999999998754321100 00000000 0000000 0000000000000 000
Q ss_pred CCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH-HHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHH
Q 004396 324 RLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS-ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (756)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l 402 (756)
.... .....+..... ................ ...+....+.++++|+|+|+|++|..++ .+
T Consensus 164 ~~~~-~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~------~~ 225 (264)
T 1r3d_A 164 SLNH-EQRQTLIAQRS-----------ANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ------QL 225 (264)
T ss_dssp TCCH-HHHHHHHHHHT-----------TSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH------HH
T ss_pred ccCH-HHHHHHHHHHh-----------hcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH------HH
Confidence 0000 00001100000 0000011000000000 0001124567899999999999997542 22
Q ss_pred HHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 403 NNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 403 ~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.+..+ +++++++++||++++|+|+++++.|.+
T Consensus 226 ~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~ 257 (264)
T 1r3d_A 226 AESSG-LSYSQVAQAGHNVHHEQPQAFAKIVQA 257 (264)
T ss_dssp HHHHC-SEEEEETTCCSCHHHHCHHHHHHHHHH
T ss_pred HHHhC-CcEEEcCCCCCchhhcCHHHHHHHHHH
Confidence 33333 789999999999999999999999984
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=218.96 Aligned_cols=114 Identities=18% Similarity=0.184 Sum_probs=97.0
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC---------ChhHHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT---------PFEGLVK 226 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S---------s~~~~a~ 226 (756)
.+.+|.. ++|...|.+.+++|+|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++
T Consensus 8 ~~~~g~~---l~y~~~G~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~~~~~~~~ 84 (356)
T 2e3j_A 8 LNCRGTR---IHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVG 84 (356)
T ss_dssp EEETTEE---EEEEEECCTTCCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGGSHHHHHH
T ss_pred EccCCeE---EEEEEecCCCCCCCEEEEECCCCCcHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcccccCHHHHHH
Confidence 3445655 4666666432357899999999999999999999994 5899999999999987 4678899
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
|+.++++.++.. +++|+||||||.+|+.+|.++|++++++|++++..
T Consensus 85 ~~~~~~~~l~~~----~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 85 DVVGVLDSYGAE----QAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp HHHHHHHHTTCS----CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred HHHHHHHHcCCC----CeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 999999987654 89999999999999999999999999999999765
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=208.69 Aligned_cols=229 Identities=14% Similarity=0.115 Sum_probs=160.5
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCc--hhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGL--GLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVK 226 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s--~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~ 226 (756)
+..+|..+.+..+.+.+ ++.|+|||+||++++ ...|..+++.| .+||.|+++|+||||.| +++++++
T Consensus 27 ~~~~g~~l~~~~~~p~~---~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 103 (270)
T 3pfb_A 27 LERDGLQLVGTREEPFG---EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTVLNEIE 103 (270)
T ss_dssp EEETTEEEEEEEEECSS---SSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHHHHHH
T ss_pred eccCCEEEEEEEEcCCC---CCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCCccCHHHHHH
Confidence 34566664444443332 247899999999988 56688899998 57899999999999998 4788999
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHh
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (756)
|+.++++.+....+.++++|+||||||.+|+.+|.++|++++++|+++|....... ......
T Consensus 104 d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~------------------~~~~~~ 165 (270)
T 3pfb_A 104 DANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGD------------------ALEGNT 165 (270)
T ss_dssp HHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHH------------------HHHTEE
T ss_pred hHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchh------------------hhhhhh
Confidence 99999999866555569999999999999999999999999999999986532100 000000
Q ss_pred hhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEE
Q 004396 307 SYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLA 386 (756)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~ 386 (756)
......+ .... ..+ .................. .....+.++++|+|+++
T Consensus 166 ~~~~~~~---------~~~~---------~~~-----------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~ 214 (270)
T 3pfb_A 166 QGVTYNP---------DHIP---------DRL-----------PFKDLTLGGFYLRIAQQL--PIYEVSAQFTKPVCLIH 214 (270)
T ss_dssp TTEECCT---------TSCC---------SEE-----------EETTEEEEHHHHHHHHHC--CHHHHHTTCCSCEEEEE
T ss_pred hccccCc---------cccc---------ccc-----------cccccccchhHhhccccc--CHHHHHhhCCccEEEEE
Confidence 0000000 0000 000 000000000111111110 11256688999999999
Q ss_pred eCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhccccc
Q 004396 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (756)
Q Consensus 387 G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~r 440 (756)
|++|.+++.+. ++.+.+.++++++++++++||+++.++++++.+.|. .|+.
T Consensus 215 g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~--~fl~ 265 (270)
T 3pfb_A 215 GTDDTVVSPNA-SKKYDQIYQNSTLHLIEGADHCFSDSYQKNAVNLTT--DFLQ 265 (270)
T ss_dssp ETTCSSSCTHH-HHHHHHHCSSEEEEEETTCCTTCCTHHHHHHHHHHH--HHHC
T ss_pred cCCCCCCCHHH-HHHHHHhCCCCeEEEcCCCCcccCccchHHHHHHHH--HHHh
Confidence 99999999995 999999999999999999999999999999999998 4444
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.7e-22 Score=201.37 Aligned_cols=208 Identities=15% Similarity=0.134 Sum_probs=152.0
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC---------ChhHHHHHHHHHHHHhhccCCCCCEEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S---------s~~~~a~dv~~~i~~l~~~~~~~~v~Lv 247 (756)
++|+|||+||++++...|..+++.| .+||+|+++|+||||.| +++++++|+.++++.+... ..+++++
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~~l~ 98 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAK--YAKVFVF 98 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT--CSEEEEE
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHh--cCCeEEE
Confidence 3689999999999999999999999 47899999999999999 7888899999999998766 5689999
Q ss_pred EeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCCh
Q 004396 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (756)
||||||.+++.+|.++|+.++++++++|........ .... .. ....+.......+ .
T Consensus 99 G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~------~~~~-~~----~~~~~~~~~~~~~------------~- 154 (251)
T 3dkr_A 99 GLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHL------VPGF-LK----YAEYMNRLAGKSD------------E- 154 (251)
T ss_dssp ESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCH------HHHH-HH----HHHHHHHHHTCCC------------C-
T ss_pred EechHHHHHHHHHHhCccceeeEEEecchhhccchh------hHHH-HH----HHHHHHhhcccCc------------c-
Confidence 999999999999999999999999998866432111 0000 00 0111111000000 0
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC
Q 004396 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (756)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~ 407 (756)
...+.. ........+..........+.++++|+|+++|++|.+++.+. .+.+.+.++
T Consensus 155 ---~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~ 211 (251)
T 3dkr_A 155 ---STQILA-------------------YLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRL-AYQLRDALI 211 (251)
T ss_dssp ---HHHHHH-------------------HHHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTH-HHHHHHHCT
T ss_pred ---hhhHHh-------------------hhHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHH-HHHHHHHhc
Confidence 000000 000011111111222346778899999999999999999995 999999887
Q ss_pred C-e--EEEEEcCCCCcccccc-hhhHHHHhh
Q 004396 408 N-C--IVRNFKDNGHTLLLEE-GISLLTIIK 434 (756)
Q Consensus 408 ~-~--~l~~i~~aGH~~~~e~-p~~~~~~I~ 434 (756)
+ . ++++++++||+.+.+. ++++.+.|.
T Consensus 212 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 242 (251)
T 3dkr_A 212 NAARVDFHWYDDAKHVITVNSAHHALEEDVI 242 (251)
T ss_dssp TCSCEEEEEETTCCSCTTTSTTHHHHHHHHH
T ss_pred CCCCceEEEeCCCCcccccccchhHHHHHHH
Confidence 7 5 9999999999999986 888888887
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-22 Score=218.18 Aligned_cols=140 Identities=14% Similarity=0.200 Sum_probs=112.5
Q ss_pred hhHHHHhcCCCCccHHHHHHhhcccc-cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcC------
Q 004396 132 ELEVLWDDGYGTDSVKDYLDAAKEII-KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK------ 204 (756)
Q Consensus 132 ~~~~~~~~~~~~~~~~~y~~~~~~~~-~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~------ 204 (756)
.+...|.++|..+..+..+.....+. ..+|..+.+.+.... ..++++|||+||++++...|..+++.|.+
T Consensus 47 ~~~~~w~~~~dwr~~e~~ln~~~~~~~~i~g~~i~~~~~~~~---~~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~ 123 (388)
T 4i19_A 47 ELAEYWRDGFDWRAAERRINQYPQFTTEIDGATIHFLHVRSP---EPDATPMVITHGWPGTPVEFLDIIGPLTDPRAHGG 123 (388)
T ss_dssp HHHHHHHHTCCHHHHHHHHHTSCEEEEEETTEEEEEEEECCS---STTCEEEEEECCTTCCGGGGHHHHHHHHCGGGGTS
T ss_pred HHHHHHhhhcChhHHHHHhccCCcEEEEECCeEEEEEEccCC---CCCCCeEEEECCCCCCHHHHHHHHHHHhCcccccC
Confidence 45567888887655565655544443 457766444333222 23578999999999999999999999976
Q ss_pred ----CcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEE
Q 004396 205 ----AFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILIL 272 (756)
Q Consensus 205 ----gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVL 272 (756)
+|+|+++|+||||.| +++++++++.++++.++.. +++++||||||.+++.+|.++|++|.++|+
T Consensus 124 ~~~~~~~vi~~dl~G~G~S~~~~~~~~~~~~~a~~~~~l~~~lg~~----~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl 199 (388)
T 4i19_A 124 DPADAFHLVIPSLPGFGLSGPLKSAGWELGRIAMAWSKLMASLGYE----RYIAQGGDIGAFTSLLLGAIDPSHLAGIHV 199 (388)
T ss_dssp CGGGCEEEEEECCTTSGGGCCCSSCCCCHHHHHHHHHHHHHHTTCS----SEEEEESTHHHHHHHHHHHHCGGGEEEEEE
T ss_pred CCCCCeEEEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC----cEEEEeccHHHHHHHHHHHhChhhceEEEE
Confidence 999999999999987 5789999999999986554 899999999999999999999999999999
Q ss_pred eCCCCc
Q 004396 273 SNPATS 278 (756)
Q Consensus 273 i~p~~~ 278 (756)
++|...
T Consensus 200 ~~~~~~ 205 (388)
T 4i19_A 200 NLLQTN 205 (388)
T ss_dssp SSCCCC
T ss_pred ecCCCC
Confidence 997553
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.1e-22 Score=208.87 Aligned_cols=261 Identities=15% Similarity=0.103 Sum_probs=145.5
Q ss_pred cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC---------ChhHHHHH
Q 004396 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT---------PFEGLVKF 227 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S---------s~~~~a~d 227 (756)
..+|.. ++|...|++ ++++|||+||++++... ......+ .++|+|+++|+||||.| +++++++|
T Consensus 21 ~~~g~~---l~~~~~g~~--~g~~vvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 94 (317)
T 1wm1_A 21 TGDGHR---IYWELSGNP--NGKPAVFIHGGPGGGIS-PHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVAD 94 (317)
T ss_dssp CSSSCE---EEEEEEECT--TSEEEEEECCTTTCCCC-GGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHHHHHHH
T ss_pred cCCCcE---EEEEEcCCC--CCCcEEEECCCCCcccc-hhhhhhccccCCeEEEECCCCCCCCCCCcccccccHHHHHHH
Confidence 335554 456666642 36789999999775532 2233344 46899999999999988 36788999
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHh-hchhHHHHhHHhHh
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILK-AMPDELHCAVPYLL 306 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 306 (756)
+.+++++++.. +++|+||||||.+|+.+|.++|++|+++|++++....... ...... .........+..+.
T Consensus 95 l~~l~~~l~~~----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 166 (317)
T 1wm1_A 95 IERLREMAGVE----QWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQR----LHWYYQDGASRFFPEKWERVL 166 (317)
T ss_dssp HHHHHHHTTCS----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHH----HHHHHTSSGGGTSHHHHHHHH
T ss_pred HHHHHHHcCCC----cEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhh----hhHHhhccchhhcHHHHHHHH
Confidence 99999987655 8999999999999999999999999999999875421100 000000 00000000000000
Q ss_pred hhhcCCh---hHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhc-c----CChhhHHHHHHHHH----HH-----HH
Q 004396 307 SYVMGDP---IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSD-I----IPKDTLLWKLKLLK----SA-----SA 369 (756)
Q Consensus 307 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~----~~-----~~ 369 (756)
....... .............. .........+..+......... . +...........+. .. ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (317)
T 1wm1_A 167 SILSDDERKDVIAAYRQRLTSADP-QVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESD 245 (317)
T ss_dssp TTSCTTGGGCHHHHHHHHHTCSCH-HHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSST
T ss_pred hhccchhhcchHHHHHhhhcCCCc-cccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhcccccccc
Confidence 0000000 00000000000000 0000000000000000000000 0 00000000000000 00 00
Q ss_pred H-HhhhccCCC-CcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCccccc-chhhHHHHhh
Q 004396 370 Y-ANSRLHAVK-AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLE-EGISLLTIIK 434 (756)
Q Consensus 370 ~-~~~~l~~i~-~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e-~p~~~~~~I~ 434 (756)
. ....+.+++ +|+|+|+|++|.+++++. ++.+.+.+|++++++++++||+++.+ .++++.+.|.
T Consensus 246 ~~~~~~~~~i~~~P~lii~G~~D~~~~~~~-~~~l~~~~p~~~~~~i~~~gH~~~~~~~~~~~~~~i~ 312 (317)
T 1wm1_A 246 DQLLRNVPLIRHIPAVIVHGRYDMACQVQN-AWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIATD 312 (317)
T ss_dssp THHHHTGGGGTTSCEEEEEETTCSSSCHHH-HHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHH
T ss_pred hhhHhhcccccCCCEEEEEecCCCCCCHHH-HHHHHhhCCCceEEEECCCCCCCCCcchHHHHHHHHH
Confidence 0 224566785 999999999999999985 89999999999999999999998764 5777777776
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=230.79 Aligned_cols=257 Identities=14% Similarity=0.139 Sum_probs=164.3
Q ss_pred CCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC---------ChhHHHHHHH
Q 004396 160 DGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT---------PFEGLVKFVE 229 (756)
Q Consensus 160 dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S---------s~~~~a~dv~ 229 (756)
||.. ++|...|+ +|+|||+||++++...|..+++.| .+||+|+++|+||||.| +++++++|+.
T Consensus 246 dg~~---l~~~~~g~----~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d~~ 318 (555)
T 3i28_A 246 PRVR---LHFVELGS----GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMV 318 (555)
T ss_dssp TTEE---EEEEEECS----SSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGGGGSHHHHHHHHH
T ss_pred CCcE---EEEEEcCC----CCEEEEEeCCCCchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccccHHHHHHHHH
Confidence 5544 45666665 799999999999999999999999 45799999999999988 3788899999
Q ss_pred HHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhH------------
Q 004396 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDE------------ 297 (756)
Q Consensus 230 ~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~------------ 297 (756)
+++++++.. +++|+||||||.+|+.+|.++|++++++|+++++............. ....+..
T Consensus 319 ~~~~~l~~~----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 393 (555)
T 3i28_A 319 TFLDKLGLS----QAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLES-IKANPVFDYQLYFQEPGVA 393 (555)
T ss_dssp HHHHHHTCS----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHH-HHTCGGGHHHHHHHSTTHH
T ss_pred HHHHHcCCC----cEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHH-HhcCCccchhHHhhCCCch
Confidence 999997654 89999999999999999999999999999999866433322211111 1110000
Q ss_pred ---HHHhHHhHhhhhcCChhH-------HHHH-hh---------hcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhH
Q 004396 298 ---LHCAVPYLLSYVMGDPIK-------MAMV-NI---------ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTL 357 (756)
Q Consensus 298 ---~~~~~~~~~~~~~~~~~~-------~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (756)
........+......... .... .. ............+...+.. .......
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 463 (555)
T 3i28_A 394 EAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKK----------SGFRGPL 463 (555)
T ss_dssp HHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTT----------TTTHHHH
T ss_pred HHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhc----------ccchhHH
Confidence 000011111111111000 0000 00 0000000000000000000 0000000
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhcc
Q 004396 358 LWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTC 437 (756)
Q Consensus 358 ~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~ 437 (756)
.+...............+.++++|+|+|+|++|.++|.+. ++.+.+.++++++++++++||++++|+|+++++.|. .
T Consensus 464 ~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~ 540 (555)
T 3i28_A 464 NWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQM-SQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILI--K 540 (555)
T ss_dssp HTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGG-GTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHHHH--H
T ss_pred HHHHhccccchhhccccccccccCEEEEEeCCCCCcCHHH-HHHHHhhCCCceEEEeCCCCCCcchhCHHHHHHHHH--H
Confidence 1100111111122346678999999999999999999995 899999999999999999999999999999999998 4
Q ss_pred cccc
Q 004396 438 KYRR 441 (756)
Q Consensus 438 f~rr 441 (756)
|+++
T Consensus 541 fl~~ 544 (555)
T 3i28_A 541 WLDS 544 (555)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4e-22 Score=205.45 Aligned_cols=218 Identities=18% Similarity=0.234 Sum_probs=148.3
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++.+.. ++++|+|||
T Consensus 19 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~lvG~S 94 (267)
T 3fla_A 19 ARARLVCLPHAGGSASFFFPLAKALAPAVEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLRPFGD----RPLALFGHS 94 (267)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHHTTTEEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHTGGGTT----SCEEEEEET
T ss_pred CCceEEEeCCCCCCchhHHHHHHHhccCcEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHHHhcCC----CceEEEEeC
Confidence 578999999999999999999999987899999999999977 688999999999988643 489999999
Q ss_pred hhhHHHHHHHHhCCCc----ceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCC
Q 004396 251 FGGCLALAVAARNPTI----DLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLP 326 (756)
Q Consensus 251 ~GG~vAl~~A~~~P~~----v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (756)
|||.+|+.+|.++|++ +.++|++++............ ..........+.. ....+... . .
T Consensus 95 ~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~----~-~--- 158 (267)
T 3fla_A 95 MGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVR----GASDERLVAELRK----LGGSDAAM----L-A--- 158 (267)
T ss_dssp HHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTT----CCCHHHHHHHHHH----TCHHHHHH----H-H---
T ss_pred hhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhc----ccchHHHHHHHHH----hcCcchhh----c-c---
Confidence 9999999999999986 999999987653222110000 0000000000000 00000000 0 0
Q ss_pred hHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhC
Q 004396 327 PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406 (756)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l 406 (756)
.......... .+. ..+.....+.......+++|+|+++|++|.+++.+. .+.+.+.+
T Consensus 159 ~~~~~~~~~~-------------------~~~---~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~ 215 (267)
T 3fla_A 159 DPELLAMVLP-------------------AIR---SDYRAVETYRHEPGRRVDCPVTVFTGDHDPRVSVGE-ARAWEEHT 215 (267)
T ss_dssp SHHHHHHHHH-------------------HHH---HHHHHHHHCCCCTTCCBSSCEEEEEETTCTTCCHHH-HHGGGGGB
T ss_pred CHHHHHHHHH-------------------HHH---HHHHhhhcccccccCcCCCCEEEEecCCCCCCCHHH-HHHHHHhc
Confidence 0000000000 000 000000000011225789999999999999999985 89999999
Q ss_pred CC-eEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 407 QN-CIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 407 ~~-~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
++ ++++++++ ||+.++++|+++++.|. .|+.+
T Consensus 216 ~~~~~~~~~~g-gH~~~~~~~~~~~~~i~--~fl~~ 248 (267)
T 3fla_A 216 TGPADLRVLPG-GHFFLVDQAAPMIATMT--EKLAG 248 (267)
T ss_dssp SSCEEEEEESS-STTHHHHTHHHHHHHHH--HHTC-
T ss_pred CCCceEEEecC-CceeeccCHHHHHHHHH--HHhcc
Confidence 87 99999998 99999999999999998 45554
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=207.95 Aligned_cols=109 Identities=21% Similarity=0.204 Sum_probs=87.0
Q ss_pred CCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC---------ChhHHHHHH
Q 004396 159 PDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT---------PFEGLVKFV 228 (756)
Q Consensus 159 ~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S---------s~~~~a~dv 228 (756)
.+|.. ++|...|++ ++++|||+||++++... ......+ .++|+|+++|+||||.| +++++++|+
T Consensus 19 ~~g~~---l~y~~~G~~--~g~pvvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 92 (313)
T 1azw_A 19 DDRHT---LYFEQCGNP--HGKPVVMLHGGPGGGCN-DKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADI 92 (313)
T ss_dssp SSSCE---EEEEEEECT--TSEEEEEECSTTTTCCC-GGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHHHHHHHH
T ss_pred CCCCE---EEEEecCCC--CCCeEEEECCCCCcccc-HHHHHhcCcCcceEEEECCCCCcCCCCCcccccccHHHHHHHH
Confidence 35544 456666642 46789999998765532 2233445 47899999999999998 367889999
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
.+++++++.. +++|+||||||.+|+.+|.++|++|+++|++++..
T Consensus 93 ~~l~~~l~~~----~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~ 137 (313)
T 1azw_A 93 ERLRTHLGVD----RWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp HHHHHHTTCS----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HHHHHHhCCC----ceEEEEECHHHHHHHHHHHhChhheeEEEEecccc
Confidence 9999997655 89999999999999999999999999999998754
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.88 E-value=7e-22 Score=213.93 Aligned_cols=258 Identities=15% Similarity=0.171 Sum_probs=156.6
Q ss_pred eeeccCCCCC-CCCCEEEEECCCCCchh-------------hHHHhHh---hh-cCCcEEEEeccCC--CCCC-------
Q 004396 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGL-------------GLILHHK---PL-GKAFEVRCLHIPV--YDRT------- 219 (756)
Q Consensus 167 ~~~~~~G~~~-~~~p~lV~lHG~~~s~~-------------~~~~~~~---~L-~~gy~Vi~~Dl~G--~G~S------- 219 (756)
++|...|.+. +++|+|||+||++++.. .|..+++ .| +++|+|+++|+|| ||.|
T Consensus 33 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~~~~ 112 (366)
T 2pl5_A 33 IAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHP 112 (366)
T ss_dssp EEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBCT
T ss_pred eeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCCCCC
Confidence 4566666532 24689999999999988 7888874 45 7899999999999 7865
Q ss_pred -------------ChhHHHHHHHHHHHHhhccCCCCCE-EEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcC
Q 004396 220 -------------PFEGLVKFVEETVRREHASSPEKPI-YLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQ 285 (756)
Q Consensus 220 -------------s~~~~a~dv~~~i~~l~~~~~~~~v-~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~ 285 (756)
+++++++|+.+++++++.. ++ +|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~- 187 (366)
T 2pl5_A 113 ETSTPYGSRFPFVSIQDMVKAQKLLVESLGIE----KLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQI- 187 (366)
T ss_dssp TTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCS----SEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHH-
T ss_pred CCCccccCCCCcccHHHHHHHHHHHHHHcCCc----eEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccc-
Confidence 5788999999999987554 88 8999999999999999999999999999999764321100
Q ss_pred CchhHHhhchhHHHHhHHhHhhhhcCC--h-hHHHHHhh---hcCCChHHHHHHHHhhh------------hhhhhhh-h
Q 004396 286 PLFPILKAMPDELHCAVPYLLSYVMGD--P-IKMAMVNI---ENRLPPRIKLEQLSNNL------------PALLPRL-S 346 (756)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~---~~~~~~~~~~~~~~~~~------------~~~~~~~-~ 346 (756)
.........+.. .+.+....+.. + ........ ............+...+ ..+.... .
T Consensus 188 ---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (366)
T 2pl5_A 188 ---AFNEVGRQAILS-DPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGE 263 (366)
T ss_dssp ---HHHHHHHHHHHT-STTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTC
T ss_pred ---hhhHHHHHHHHh-CcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHH
Confidence 000000000000 00000000000 0 00000000 00000000000000000 0000000 0
Q ss_pred hhhccCChhhHHHHHHHHHHHH----HHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC----CeEEEEE-cCC
Q 004396 347 VMSDIIPKDTLLWKLKLLKSAS----AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNF-KDN 417 (756)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~----~~~l~~i-~~a 417 (756)
..........+......+.... ......+.++++|+|+|+|++|.+++++. ++.+.+.++ +++++++ +++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 342 (366)
T 2pl5_A 264 SFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQ-SREIVKSLEAADKRVFYVELQSGE 342 (366)
T ss_dssp CSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHH-HHHHHHHHHHTTCCEEEEEECCCB
T ss_pred hhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHH-HHHHHHHhhhcccCeEEEEeCCCC
Confidence 0001111222222222222110 01235778999999999999999999995 999999998 8999999 899
Q ss_pred CCcccccchhhHHHHhh
Q 004396 418 GHTLLLEEGISLLTIIK 434 (756)
Q Consensus 418 GH~~~~e~p~~~~~~I~ 434 (756)
||+++.|+|+++++.|.
T Consensus 343 gH~~~~e~p~~~~~~i~ 359 (366)
T 2pl5_A 343 GHDSFLLKNPKQIEILK 359 (366)
T ss_dssp SSGGGGSCCHHHHHHHH
T ss_pred CcchhhcChhHHHHHHH
Confidence 99999999999999998
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-22 Score=221.84 Aligned_cols=257 Identities=11% Similarity=0.100 Sum_probs=158.7
Q ss_pred eeeccCCCCC-CCCCEEEEECCCCCchhh---HHHhHh---hh-cCCcEEEEeccCC--CCCC-----------------
Q 004396 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGLG---LILHHK---PL-GKAFEVRCLHIPV--YDRT----------------- 219 (756)
Q Consensus 167 ~~~~~~G~~~-~~~p~lV~lHG~~~s~~~---~~~~~~---~L-~~gy~Vi~~Dl~G--~G~S----------------- 219 (756)
++|...|..+ +++|+|||+||++++... |..++. .| +++|+|+++|+|| ||.|
T Consensus 96 l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~~~~ 175 (444)
T 2vat_A 96 VAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGA 175 (444)
T ss_dssp EEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGG
T ss_pred EEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCccccccccccc
Confidence 5666666532 236899999999999998 888875 57 7899999999999 6765
Q ss_pred -----ChhHHHHHHHHHHHHhhccCCCCC-EEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhH---
Q 004396 220 -----PFEGLVKFVEETVRREHASSPEKP-IYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPI--- 290 (756)
Q Consensus 220 -----s~~~~a~dv~~~i~~l~~~~~~~~-v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~--- 290 (756)
+++++++|+.+++++++.+ + ++|+||||||.+|+.+|.++|++|+++|++++......... .....
T Consensus 176 ~f~~~t~~~~a~dl~~ll~~l~~~----~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~-~~~~~~~~ 250 (444)
T 2vat_A 176 KFPRTTIRDDVRIHRQVLDRLGVR----QIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCA-AWFETQRQ 250 (444)
T ss_dssp GCCCCCHHHHHHHHHHHHHHHTCC----CEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHH-HHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHhcCCc----cceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccch-hHHHHHHH
Confidence 5788999999999998765 7 99999999999999999999999999999998764311000 00000
Q ss_pred -HhhchhHH------------HHhHHhHhhhhcCChhHHHHHhhhcCCC-----------------------------hH
Q 004396 291 -LKAMPDEL------------HCAVPYLLSYVMGDPIKMAMVNIENRLP-----------------------------PR 328 (756)
Q Consensus 291 -~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~ 328 (756)
....+... ......................+..... ..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (444)
T 2vat_A 251 CIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPI 330 (444)
T ss_dssp HHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CG
T ss_pred HHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCch
Confidence 00000000 0000000000000000000000000000 00
Q ss_pred HHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHH------HHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHH
Q 004396 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS------AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (756)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l 402 (756)
...+.+..... ...........+......+.... .+....+.++++|+|+|+|++|.+++.+. ++.+
T Consensus 331 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~-~~~l 403 (444)
T 2vat_A 331 EAVSSYLRYQA------QKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDE-HVEM 403 (444)
T ss_dssp GGHHHHHHHHH------HHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHH-HHHH
T ss_pred hhHHHHHHHHH------HHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHH-HHHH
Confidence 00000000000 00001111112221111111100 00235678999999999999999999995 9999
Q ss_pred HHhCCCeEEEEEc-CCCCcccccchhhHHHHhhh
Q 004396 403 NNSLQNCIVRNFK-DNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 403 ~~~l~~~~l~~i~-~aGH~~~~e~p~~~~~~I~~ 435 (756)
.+.++++++++++ ++||++++|+|+++++.|.+
T Consensus 404 ~~~~p~~~~~~i~~~~GH~~~~e~p~~~~~~i~~ 437 (444)
T 2vat_A 404 GRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRG 437 (444)
T ss_dssp HHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHH
T ss_pred HHHCCCcEEEEeCCCCCcchHHhCHHHHHHHHHH
Confidence 9999999999999 99999999999999999983
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.2e-22 Score=216.03 Aligned_cols=276 Identities=15% Similarity=0.116 Sum_probs=160.4
Q ss_pred cccCCCCCceeeeeccCCC----CCCCCCEEEEECCCCCchhhHHHhHhhhc---C--Cc---EEEEeccCCCCCC----
Q 004396 156 IIKPDGGPPRWFCPVDCGR----PLKGSPTLLFLPGIDGLGLGLILHHKPLG---K--AF---EVRCLHIPVYDRT---- 219 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~----~~~~~p~lV~lHG~~~s~~~~~~~~~~L~---~--gy---~Vi~~Dl~G~G~S---- 219 (756)
+...||..+.+..+.+.+. +....|+|||+||++++...|..+++.|. . || +|+++|+||||.|
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~~~ 104 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRN 104 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHHHT
T ss_pred ccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCCCC
Confidence 4456776643333322220 00123799999999999999999999996 2 68 9999999999966
Q ss_pred --------ChhHHHHHHHHHHHHhhcc--CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcC------C
Q 004396 220 --------PFEGLVKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS------Q 283 (756)
Q Consensus 220 --------s~~~~a~dv~~~i~~l~~~--~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~------~ 283 (756)
+++++++|+.++++.+... ...++++|+||||||.+|+.+|.++|++|+++|+++|....... .
T Consensus 105 ~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 184 (398)
T 2y6u_A 105 RGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPG 184 (398)
T ss_dssp TTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCSCCCTT
T ss_pred ccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccccccccccc
Confidence 4678899999999875421 11224999999999999999999999999999999997653210 0
Q ss_pred cCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHH----hhhcCCChHHHHHHHHhhhhhhh----hhhhhhhccCChh
Q 004396 284 LQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMV----NIENRLPPRIKLEQLSNNLPALL----PRLSVMSDIIPKD 355 (756)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 355 (756)
..... ..........+................. .......+ ...+.+........ .............
T Consensus 185 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (398)
T 2y6u_A 185 LPPDS---PQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHS-QILQNIIDFERTKASGDDEDGGPVRTKMEQA 260 (398)
T ss_dssp CCTTC---CCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCH-HHHHHHHHHHEEC--------CCEEESSCHH
T ss_pred ccccc---cccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCH-HHHHHHHHhcCccccccccCCCceEecCCch
Confidence 00000 0000000000000000000000000000 00000000 11111111000000 0000000000000
Q ss_pred hHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 356 TLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
........+..........+.++++|+|+|+|++|.+++++. ++.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~-~~~l~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 339 (398)
T 2y6u_A 261 QNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQN-QLFLQKTLQNYHLDVIPGGSHLVNVEAPDLVIERINH 339 (398)
T ss_dssp HHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHH-HHHHHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHHH
T ss_pred hhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHH-HHHHHHhCCCceEEEeCCCCccchhcCHHHHHHHHHH
Confidence 000000000000112236678899999999999999999995 9999999999999999999999999999999999984
Q ss_pred c
Q 004396 436 T 436 (756)
Q Consensus 436 ~ 436 (756)
.
T Consensus 340 f 340 (398)
T 2y6u_A 340 H 340 (398)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-21 Score=211.73 Aligned_cols=253 Identities=14% Similarity=0.142 Sum_probs=156.4
Q ss_pred eeeccCCCCCC-CCCEEEEECCCCCchhh---------HHHhHh---hh-cCCcEEEEeccCC-CCCC------------
Q 004396 167 FCPVDCGRPLK-GSPTLLFLPGIDGLGLG---------LILHHK---PL-GKAFEVRCLHIPV-YDRT------------ 219 (756)
Q Consensus 167 ~~~~~~G~~~~-~~p~lV~lHG~~~s~~~---------~~~~~~---~L-~~gy~Vi~~Dl~G-~G~S------------ 219 (756)
++|...|.+.. ++|+|||+||++++... |..+++ .| +++|+|+++|+|| ||.|
T Consensus 46 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~ 125 (377)
T 2b61_A 46 VAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGK 125 (377)
T ss_dssp EEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSS
T ss_pred EEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCccccc
Confidence 46666665322 36899999999999998 988885 48 7899999999999 5654
Q ss_pred ---------ChhHHHHHHHHHHHHhhccCCCCCEE-EEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchh
Q 004396 220 ---------PFEGLVKFVEETVRREHASSPEKPIY-LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFP 289 (756)
Q Consensus 220 ---------s~~~~a~dv~~~i~~l~~~~~~~~v~-LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~ 289 (756)
+++++++|+.++++.+... +++ |+||||||.+|+.+|.++|++|+++|++++........ ..
T Consensus 126 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----~~ 197 (377)
T 2b61_A 126 PYGSQFPNIVVQDIVKVQKALLEHLGIS----HLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEA----IG 197 (377)
T ss_dssp BCGGGCCCCCHHHHHHHHHHHHHHTTCC----CEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHH----HH
T ss_pred cccccCCcccHHHHHHHHHHHHHHcCCc----ceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccc----hh
Confidence 4678899999999887654 787 99999999999999999999999999999865321100 00
Q ss_pred HHhhchhHHHH-----------------h--HHhHhhhh-cCChhHHHHHhhhcCCCh-------HHHHHHHHhhhhhhh
Q 004396 290 ILKAMPDELHC-----------------A--VPYLLSYV-MGDPIKMAMVNIENRLPP-------RIKLEQLSNNLPALL 342 (756)
Q Consensus 290 ~~~~~~~~~~~-----------------~--~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 342 (756)
........+.. . ....+... ...+..+. ..+...... ....+.+.....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 273 (377)
T 2b61_A 198 FNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLA-KAFGRATKSDGSFWGDYFQVESYLSYQG--- 273 (377)
T ss_dssp HHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHH-HHTTTCBCTTCCTTSCCBHHHHHHHHHH---
T ss_pred HHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHH-HHhccccccccccccchHHHHHHHHhhh---
Confidence 00000000000 0 00000000 00000000 000000000 000000000000
Q ss_pred hhhhhhhccCChhhHHHHHHHHHHHH-----HHHhhhccCCCCcEEEEEeCCCCCCCC----HHHHHHHHHhCCCeEEEE
Q 004396 343 PRLSVMSDIIPKDTLLWKLKLLKSAS-----AYANSRLHAVKAEVLVLASGKDNMLPS----EDEAKRLNNSLQNCIVRN 413 (756)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLvI~G~~D~~vp~----~~~~~~l~~~l~~~~l~~ 413 (756)
...........+......+.... ......+.++++|+|+|+|++|.++++ +. .+.+.+.++++++++
T Consensus 274 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~l~~~~~~~~~~~ 349 (377)
T 2b61_A 274 ---KKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKS-KQLLEQSGVDLHFYE 349 (377)
T ss_dssp ---HHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHH-HHHHHHTTCEEEEEE
T ss_pred ---hhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHH-HHHHHhcCCCceEEE
Confidence 00001112222222222111100 011356789999999999999999999 74 889999999999999
Q ss_pred Ec-CCCCcccccchhhHHHHhhh
Q 004396 414 FK-DNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 414 i~-~aGH~~~~e~p~~~~~~I~~ 435 (756)
++ ++||++++|+|+++++.|.+
T Consensus 350 i~~~~gH~~~~e~p~~~~~~i~~ 372 (377)
T 2b61_A 350 FPSDYGHDAFLVDYDQFEKRIRD 372 (377)
T ss_dssp ECCTTGGGHHHHCHHHHHHHHHH
T ss_pred eCCCCCchhhhcCHHHHHHHHHH
Confidence 99 99999999999999999983
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-21 Score=199.77 Aligned_cols=212 Identities=18% Similarity=0.215 Sum_probs=149.3
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
+|+|||+||++++...|..+++.| ..+|.|+++|+||||.| +++++++|+.++++.+... .++++|+|||
T Consensus 40 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~i~l~G~S 117 (270)
T 3rm3_A 40 PVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQR--CQTIFVTGLS 117 (270)
T ss_dssp SEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTCCHHHHHHHHHHHHHHHHTT--CSEEEEEEET
T ss_pred CeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCCCCCCccccccCCHHHHHHHHHHHHHHHHhh--CCcEEEEEEc
Confidence 689999999999999999999999 45899999999999988 6889999999999998744 4489999999
Q ss_pred hhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHH
Q 004396 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (756)
Q Consensus 251 ~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (756)
|||.+|+.+|.++|+ ++++|+++|+..... ........ .....++...... .....
T Consensus 118 ~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~------------~~~~~- 173 (270)
T 3rm3_A 118 MGGTLTLYLAEHHPD-ICGIVPINAAVDIPA--------IAAGMTGG--GELPRYLDSIGSD------------LKNPD- 173 (270)
T ss_dssp HHHHHHHHHHHHCTT-CCEEEEESCCSCCHH--------HHHHSCC-----CCSEEECCCCC------------CSCTT-
T ss_pred HhHHHHHHHHHhCCC-ccEEEEEcceecccc--------cccchhcc--hhHHHHHHHhCcc------------ccccc-
Confidence 999999999999999 999999998663211 00000000 0000000000000 00000
Q ss_pred HHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCe-
Q 004396 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC- 409 (756)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~- 409 (756)
.....+.......... +..........+.++++|+|+++|++|.+++.+. .+.+.+.+++.
T Consensus 174 ----------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~ 235 (270)
T 3rm3_A 174 ----------------VKELAYEKTPTASLLQ-LARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGN-ADIIFQGISSTE 235 (270)
T ss_dssp ----------------CCCCCCSEEEHHHHHH-HHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTH-HHHHHHHSCCSS
T ss_pred ----------------hHhhcccccChhHHHH-HHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHH-HHHHHHhcCCCc
Confidence 0000000011111111 1111122346788899999999999999999995 99999999866
Q ss_pred -EEEEEcCCCCcccccch-hhHHHHhh
Q 004396 410 -IVRNFKDNGHTLLLEEG-ISLLTIIK 434 (756)
Q Consensus 410 -~l~~i~~aGH~~~~e~p-~~~~~~I~ 434 (756)
++++++++||+++.+.+ +++.+.|.
T Consensus 236 ~~~~~~~~~gH~~~~~~~~~~~~~~i~ 262 (270)
T 3rm3_A 236 KEIVRLRNSYHVATLDYDQPMIIERSL 262 (270)
T ss_dssp EEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred ceEEEeCCCCcccccCccHHHHHHHHH
Confidence 99999999999999987 77777776
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-22 Score=224.82 Aligned_cols=250 Identities=11% Similarity=0.070 Sum_probs=162.2
Q ss_pred cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHHHH
Q 004396 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVE 229 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~ 229 (756)
+.||.. ++|...|+ +|+|||+||++++...|..+++.| +++|+|+++|+||||.| +++++++|+.
T Consensus 10 ~~dG~~---l~y~~~G~----gp~VV~lHG~~~~~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~~~s~~~~a~dl~ 82 (456)
T 3vdx_A 10 NSTSID---LYYEDHGT----GVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLN 82 (456)
T ss_dssp TTEEEE---EEEEEESS----SEEEEEECCTTCCGGGGTTHHHHHHHHTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred ccCCeE---EEEEEeCC----CCEEEEECCCCCcHHHHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 445555 45666665 789999999999999999999999 78999999999999998 5889999999
Q ss_pred HHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC-CCcceEEEEeCCCCcCCcCCcCC-----chhHHhhchhHHHH---
Q 004396 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQLQP-----LFPILKAMPDELHC--- 300 (756)
Q Consensus 230 ~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~-P~~v~~lVLi~p~~~~~~~~~~~-----~~~~~~~~~~~~~~--- 300 (756)
++++.+... +++|+||||||.+++.+|+++ |+.++++|++++........... .......+......
T Consensus 83 ~~l~~l~~~----~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (456)
T 3vdx_A 83 TVLETLDLQ----DAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRY 158 (456)
T ss_dssp HHHHHHTCC----SEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHhCCC----CeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHHHHHhhhccch
Confidence 999997654 899999999999999999887 89999999999876432221111 00111111110000
Q ss_pred -hHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCC
Q 004396 301 -AVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVK 379 (756)
Q Consensus 301 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 379 (756)
.....+........ ........ ............ ... ............+....+.+++
T Consensus 159 ~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~-----------~~~---~~~~~~~~~~~~d~~~~l~~i~ 218 (456)
T 3vdx_A 159 AFYTGFFNDFYNLDE-----NLGTRISE-EAVRNSWNTAAS-----------GGF---FAAAAAPTTWYTDFRADIPRID 218 (456)
T ss_dssp HHHHHHHHHHTTTTT-----SBTTTBCH-HHHHHHHHHHHT-----------SCT---THHHHGGGGTTCCCTTTSTTCC
T ss_pred HHHHHHHHHHhcccc-----cccccccH-HHHHHHhhhccc-----------cch---hhhhhhhhhhhhhHHHHhhhCC
Confidence 00000100000000 00000000 000000000000 000 0000000000011125678899
Q ss_pred CcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhccccc
Q 004396 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (756)
Q Consensus 380 ~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~r 440 (756)
+|+|+|+|++|.+++.+...+.+.+.++++++++++++||+++.++|+.+++.|. .|+.
T Consensus 219 ~PvLiI~G~~D~~vp~~~~~~~l~~~~~~~~~~~i~gagH~~~~e~p~~v~~~I~--~FL~ 277 (456)
T 3vdx_A 219 VPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALL--AFLA 277 (456)
T ss_dssp SCCEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCSCTTTTTHHHHHHHHH--HHHH
T ss_pred CCEEEEEeCCCCCcCHHHHHHHHHHHCCCceEEEeCCCCCcchhhCHHHHHHHHH--HHHH
Confidence 9999999999999998832788888899999999999999999999999999998 4443
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.78 E-value=7.7e-24 Score=221.83 Aligned_cols=261 Identities=15% Similarity=0.054 Sum_probs=155.8
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC------------hhHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP------------FEGL 224 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss------------~~~~ 224 (756)
++.+|.. ++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.|+ ++++
T Consensus 10 ~~~~g~~---~~~~~~g~----~p~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~ 82 (304)
T 3b12_A 10 VDVGDVT---INCVVGGS----GPALLLLHGFPQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGAPDHANYSFRAM 82 (304)
Confidence 3446655 45666664 788999999999999999999999999999999999999873 4677
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHh
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (756)
++|+.++++.++.. +++|+||||||.+|+.+|.++|++|+++|++++.................... ......+.
T Consensus 83 ~~~l~~~l~~l~~~----~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 157 (304)
T 3b12_A 83 ASDQRELMRTLGFE----RFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWH-WYFLQQPA 157 (304)
Confidence 88999999886544 89999999999999999999999999999999865332111100000000000 00000000
Q ss_pred -HhhhhcC-ChhHHHHH-hhhcCCC-hHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH-----HHHHhhhc
Q 004396 305 -LLSYVMG-DPIKMAMV-NIENRLP-PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-----SAYANSRL 375 (756)
Q Consensus 305 -~~~~~~~-~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l 375 (756)
....... ........ ....... ...........+.... ............+... .......+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (304)
T 3b12_A 158 PYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQW---------RDPAAIHGSCCDYRAGGTIDFELDHGDLG 228 (304)
Confidence 0000000 00000000 0000000 0000000000000000 0000000001111100 00011226
Q ss_pred cCCCCcEEEEEeCCCCCC-CCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhccccccC
Q 004396 376 HAVKAEVLVLASGKDNML-PSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRS 442 (756)
Q Consensus 376 ~~i~~PvLvI~G~~D~~v-p~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr~ 442 (756)
.++++|+|+|+|++|..+ +.. ..+.+.+..++++++++ ++||++++|+|+++++.|. .|+.+.
T Consensus 229 ~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~--~fl~~~ 292 (304)
T 3b12_A 229 RQVQCPALVFSGSAGLMHSLFE-MQVVWAPRLANMRFASL-PGGHFFVDRFPDDTARILR--EFLSDA 292 (304)
Confidence 889999999999999554 555 47778888899999999 9999999999999999998 566543
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.87 E-value=7e-22 Score=206.83 Aligned_cols=231 Identities=14% Similarity=0.060 Sum_probs=144.2
Q ss_pred CCCEEEEECC--CCCchhhHHHhHhhhcCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEE
Q 004396 178 GSPTLLFLPG--IDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG--~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~Lv 247 (756)
++|+|||+|| ++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++++.. +++|+
T Consensus 40 ~~p~vv~lHG~G~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~----~~~lv 115 (292)
T 3l80_A 40 GNPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQANVGLRDWVNAILMIFEHFKFQ----SYLLC 115 (292)
T ss_dssp CSSEEEEECCSSSCCHHHHTHHHHTTSCTTSEEEEECCTTSTTSCCCCCTTCCHHHHHHHHHHHHHHSCCS----EEEEE
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCcccccHHHHHHHHHHHHHHhCCC----CeEEE
Confidence 4689999995 46778899999999999999999999999988 4889999999999997554 89999
Q ss_pred EeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCc--CCcC-C---chhHHhhchhHHH-H-hHHhHhhhhcCChhHHHHH
Q 004396 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGR--SQLQ-P---LFPILKAMPDELH-C-AVPYLLSYVMGDPIKMAMV 319 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~--~~~~-~---~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 319 (756)
||||||.+|+.+|.++|++|+++|+++|...... .... . ............. . .....+...+.....
T Consensus 116 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 191 (292)
T 3l80_A 116 VHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQF---- 191 (292)
T ss_dssp EETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHH----
T ss_pred EEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHHH----
Confidence 9999999999999999999999999997542100 0000 0 0000000000000 0 000000000000000
Q ss_pred hhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHH
Q 004396 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA 399 (756)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~ 399 (756)
...................+........+. ..+....+.. ++|+|+|+|++|..++.+ +
T Consensus 192 ---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---------~~~~~~~l~~-~~P~lii~g~~D~~~~~~--~ 250 (292)
T 3l80_A 192 ---------KQLWRGYDYCQRQLNDVQSLPDFKIRLALG---------EEDFKTGISE-KIPSIVFSESFREKEYLE--S 250 (292)
T ss_dssp ---------HHHHHHHHHHHHHHHTTTTSTTCCSSCCCC---------GGGGCCCCCT-TSCEEEEECGGGHHHHHT--S
T ss_pred ---------HHhHHHHHHHHHHHHhhhhccccchhhhhc---------chhhhhccCC-CCCEEEEEccCccccchH--H
Confidence 000000000000000000000000000000 0000134556 899999999999998876 4
Q ss_pred HHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 400 KRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 400 ~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
.+.+.+++++ ++++++||++++|+|+++++.|. .|+++
T Consensus 251 -~~~~~~~~~~-~~~~~~gH~~~~e~p~~~~~~i~--~fl~~ 288 (292)
T 3l80_A 251 -EYLNKHTQTK-LILCGQHHYLHWSETNSILEKVE--QLLSN 288 (292)
T ss_dssp -TTCCCCTTCE-EEECCSSSCHHHHCHHHHHHHHH--HHHHT
T ss_pred -HHhccCCCce-eeeCCCCCcchhhCHHHHHHHHH--HHHHh
Confidence 6777888999 99999999999999999999998 45543
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-21 Score=198.62 Aligned_cols=209 Identities=15% Similarity=0.113 Sum_probs=143.0
Q ss_pred CCCEEEEECCCCCchhhHHH--hHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCCCCCEEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLIL--HHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~--~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~Lv 247 (756)
++|+|||+||++++...|.. +...| .++|+|+++|+||||.| +++++++|+.++++.+... +++|+
T Consensus 36 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~~~~l~~~----~~~l~ 111 (270)
T 3llc_A 36 ERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRDGTISRWLEEALAVLDHFKPE----KAILV 111 (270)
T ss_dssp TSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCGGGCCHHHHHHHHHHHHHHHCCS----EEEEE
T ss_pred CCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCccccccHHHHHHHHHHHHHHhccC----CeEEE
Confidence 48999999999998766543 66667 67899999999999988 5889999999999997633 89999
Q ss_pred EeChhhHHHHHHHHh---CC---CcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhh
Q 004396 248 GDSFGGCLALAVAAR---NP---TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNI 321 (756)
Q Consensus 248 GhS~GG~vAl~~A~~---~P---~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (756)
||||||.+|+.+|.+ +| +.++++|+++|......... ...+.......+.... .....
T Consensus 112 G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~-------- 175 (270)
T 3llc_A 112 GSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLI------EPLLGDRERAELAENG--YFEEV-------- 175 (270)
T ss_dssp EETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTT------GGGCCHHHHHHHHHHS--EEEEC--------
T ss_pred EeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhh------hhhhhhhhhhhhhccC--cccCh--------
Confidence 999999999999999 99 99999999998653211110 0000000000000000 00000
Q ss_pred hcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHH
Q 004396 322 ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKR 401 (756)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~ 401 (756)
.. ....+............ .......+.++++|+|+++|++|.+++.+. ++.
T Consensus 176 ---------------------~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~-~~~ 227 (270)
T 3llc_A 176 ---------------------SE----YSPEPNIFTRALMEDGR--ANRVMAGMIDTGCPVHILQGMADPDVPYQH-ALK 227 (270)
T ss_dssp ---------------------CT----TCSSCEEEEHHHHHHHH--HTCCTTSCCCCCSCEEEEEETTCSSSCHHH-HHH
T ss_pred ---------------------hh----cccchhHHHHHHHhhhh--hhhhhhhhhcCCCCEEEEecCCCCCCCHHH-HHH
Confidence 00 00000000000001110 001135678899999999999999999995 999
Q ss_pred HHHhCCC--eEEEEEcCCCCccc-ccchhhHHHHhh
Q 004396 402 LNNSLQN--CIVRNFKDNGHTLL-LEEGISLLTIIK 434 (756)
Q Consensus 402 l~~~l~~--~~l~~i~~aGH~~~-~e~p~~~~~~I~ 434 (756)
+.+.+++ +++++++++||++. .+.++.+.+.|.
T Consensus 228 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 263 (270)
T 3llc_A 228 LVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIR 263 (270)
T ss_dssp HHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHH
T ss_pred HHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHH
Confidence 9999998 99999999999655 467788877776
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=206.39 Aligned_cols=226 Identities=11% Similarity=0.055 Sum_probs=143.0
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcC---CcEEEEeccCCCCCCC------hhHHHHHHHHHHHHhhccCCCCCEEEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGK---AFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASSPEKPIYLVG 248 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~---gy~Vi~~Dl~G~G~Ss------~~~~a~dv~~~i~~l~~~~~~~~v~LvG 248 (756)
++|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+ ++++++++.++++.+ .++++|+|
T Consensus 35 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~l~~~~~~~-----~~~~~lvG 109 (302)
T 1pja_A 35 SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMAKA-----PQGVHLIC 109 (302)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHHHHHHHHHHHHHHHHHHC-----TTCEEEEE
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhcCCCcEEEEeccCCCccchhhHHHHHHHHHHHHHHHhhcC-----CCcEEEEE
Confidence 478899999999999999999999954 7999999999999882 566677777776664 34899999
Q ss_pred eChhhHHHHHHHHhCCC-cceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHH--HHHhhhcCC
Q 004396 249 DSFGGCLALAVAARNPT-IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM--AMVNIENRL 325 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P~-~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 325 (756)
|||||.+|+.+|.++|+ +|+++|+++++....... .. ................ ....+... ........
T Consensus 110 hS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~- 181 (302)
T 1pja_A 110 YSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGD-TD--YLKWLFPTSMRSNLYR----ICYSPWGQEFSICNYWHD- 181 (302)
T ss_dssp ETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSC-CH--HHHHHCTTCCHHHHHH----HHTSTTGGGSTGGGGBCC-
T ss_pred ECHHHHHHHHHHHhcCccccCEEEEECCCccccccc-ch--hhhhHHHHHHHHHHhh----ccchHHHHHhhhhhcccC-
Confidence 99999999999999999 799999999866322111 00 0100111100000000 00000000 00000000
Q ss_pred ChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q 004396 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405 (756)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~ 405 (756)
+ .....+.. ...+ ...+....... ...+....+.+++ |+++|+|++|.+++++. ++.+.+.
T Consensus 182 -~-~~~~~~~~-~~~~---~~~~~~~~~~~-----------~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~-~~~~~~~ 242 (302)
T 1pja_A 182 -P-HHDDLYLN-ASSF---LALINGERDHP-----------NATVWRKNFLRVG-HLVLIGGPDDGVITPWQ-SSFFGFY 242 (302)
T ss_dssp -T-TCHHHHHH-HCSS---HHHHTTSSCCT-----------THHHHHHHHTTCS-EEEEEECTTCSSSSSGG-GGGTCEE
T ss_pred -h-hhhhhhhc-cchH---HHHhhcCCccc-----------cchhHHHHHhccC-cEEEEEeCCCCccchhH-hhHhhhc
Confidence 0 00000000 0000 00000000000 0011135678899 99999999999999985 7777666
Q ss_pred CCC---------------------------eEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 406 LQN---------------------------CIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 406 l~~---------------------------~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.++ +++++++++||+++.|+|+.+++.|.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 299 (302)
T 1pja_A 243 DANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEP 299 (302)
T ss_dssp CTTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGG
T ss_pred CCcccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHH
Confidence 665 999999999999999999999999883
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=8.2e-21 Score=205.80 Aligned_cols=268 Identities=15% Similarity=0.114 Sum_probs=156.7
Q ss_pred cccccCCCCCceeeeeccCCC---CCCCCCEEEEECCCCCchhhHHHhHh------hh-cCCcEEEEeccCCCCCCC---
Q 004396 154 KEIIKPDGGPPRWFCPVDCGR---PLKGSPTLLFLPGIDGLGLGLILHHK------PL-GKAFEVRCLHIPVYDRTP--- 220 (756)
Q Consensus 154 ~~~~~~dg~~~~~~~~~~~G~---~~~~~p~lV~lHG~~~s~~~~~~~~~------~L-~~gy~Vi~~Dl~G~G~Ss--- 220 (756)
..+.+.||..+.+..+..... +..++|+|||+||++++...|..+.. .| .+||+|+++|+||||.|+
T Consensus 30 ~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S~~~~ 109 (377)
T 1k8q_A 30 YEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNL 109 (377)
T ss_dssp EEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEES
T ss_pred EEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCCCCCCC
Confidence 345566776644433322210 00247899999999999999887766 77 457999999999999773
Q ss_pred -------------hhHHHH-HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCC---cceEEEEeCCCCcCCcCC
Q 004396 221 -------------FEGLVK-FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT---IDLILILSNPATSFGRSQ 283 (756)
Q Consensus 221 -------------~~~~a~-dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~---~v~~lVLi~p~~~~~~~~ 283 (756)
++++++ |+.++++.+....+.++++|+||||||.+|+.+|.++|+ +++++|+++|........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~~~~~ 189 (377)
T 1k8q_A 110 YYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTE 189 (377)
T ss_dssp SSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCC
T ss_pred CCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchhcccch
Confidence 457787 888877765433344589999999999999999999998 899999999976432211
Q ss_pred cCCchhHHhhch-hHHHHh------------HHhHhhhhcCChh-HHHH---HhhhcCCChHHHHHHHHhhhhhhhhhhh
Q 004396 284 LQPLFPILKAMP-DELHCA------------VPYLLSYVMGDPI-KMAM---VNIENRLPPRIKLEQLSNNLPALLPRLS 346 (756)
Q Consensus 284 ~~~~~~~~~~~~-~~~~~~------------~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (756)
. .. ....... ...... ............. .... ..................
T Consensus 190 ~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 257 (377)
T 1k8q_A 190 T-LI-NKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLD---------- 257 (377)
T ss_dssp S-GG-GGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHH----------
T ss_pred h-HH-HHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHH----------
Confidence 1 00 0000000 000000 0000000000000 0000 000000000000000000
Q ss_pred hhhccCCh----hhHHHHHHHHH--------------HHHHH-----HhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHH
Q 004396 347 VMSDIIPK----DTLLWKLKLLK--------------SASAY-----ANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLN 403 (756)
Q Consensus 347 ~~~~~~~~----~~~~~~~~~~~--------------~~~~~-----~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~ 403 (756)
......+. ..+........ ....+ ....+.++++|+|+|+|++|.++|++. ++.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~ 336 (377)
T 1k8q_A 258 VYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHD-VDLLL 336 (377)
T ss_dssp HHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHH-HHHHH
T ss_pred HHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHH-HHHHH
Confidence 00000010 00111111100 00000 012378899999999999999999995 99999
Q ss_pred HhCCCeE-EEEEcCCCCcccc---cchhhHHHHhh
Q 004396 404 NSLQNCI-VRNFKDNGHTLLL---EEGISLLTIIK 434 (756)
Q Consensus 404 ~~l~~~~-l~~i~~aGH~~~~---e~p~~~~~~I~ 434 (756)
+.+++++ +++++++||+.++ ++|+++.+.|.
T Consensus 337 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~ 371 (377)
T 1k8q_A 337 SKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIV 371 (377)
T ss_dssp TTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHH
T ss_pred HhCcCcccEEecCCCCceEEEecCCcHHHHHHHHH
Confidence 9999988 9999999999997 89999988887
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.86 E-value=7e-21 Score=188.28 Aligned_cols=179 Identities=15% Similarity=0.231 Sum_probs=149.8
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHH--hHhhh-cCCcEEEEeccCCCCCC-----------Chh
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLIL--HHKPL-GKAFEVRCLHIPVYDRT-----------PFE 222 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~--~~~~L-~~gy~Vi~~Dl~G~G~S-----------s~~ 222 (756)
.+.+|..+....|.+.|+ +|+|||+||++++...|.. +.+.| .+||.|+++|+||+|.| +.+
T Consensus 9 ~~~~g~~l~~~~~~~~~~----~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 84 (207)
T 3bdi_A 9 IDVNGTRVFQRKMVTDSN----RRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGIDRGDLK 84 (207)
T ss_dssp EEETTEEEEEEEECCTTC----CEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTCCTTCCHH
T ss_pred EeeCCcEEEEEEEeccCC----CCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCCCCcchHH
Confidence 344565533222555554 7899999999999999999 89999 55799999999999998 688
Q ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhH
Q 004396 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAV 302 (756)
Q Consensus 223 ~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (756)
++++++..+++.+.. ++++++|||+||.+++.+|.++|++++++|+++|..... .
T Consensus 85 ~~~~~~~~~~~~~~~----~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~---------~------------ 139 (207)
T 3bdi_A 85 HAAEFIRDYLKANGV----ARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES---------L------------ 139 (207)
T ss_dssp HHHHHHHHHHHHTTC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG---------G------------
T ss_pred HHHHHHHHHHHHcCC----CceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc---------h------------
Confidence 889999999988644 389999999999999999999999999999999852100 0
Q ss_pred HhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcE
Q 004396 303 PYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEV 382 (756)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 382 (756)
...+.++++|+
T Consensus 140 ---------------------------------------------------------------------~~~~~~~~~p~ 150 (207)
T 3bdi_A 140 ---------------------------------------------------------------------KGDMKKIRQKT 150 (207)
T ss_dssp ---------------------------------------------------------------------HHHHTTCCSCE
T ss_pred ---------------------------------------------------------------------hHHHhhccCCE
Confidence 02335678999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 383 LVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 383 LvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
++++|++|.+++.+. .+.+.+.++++++++++++||..+.++++++.+.|.
T Consensus 151 l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~ 201 (207)
T 3bdi_A 151 LLVWGSKDHVVPIAL-SKEYASIISGSRLEIVEGSGHPVYIEKPEEFVRITV 201 (207)
T ss_dssp EEEEETTCTTTTHHH-HHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred EEEEECCCCccchHH-HHHHHHhcCCceEEEeCCCCCCccccCHHHHHHHHH
Confidence 999999999999995 999999999999999999999999999999988887
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-20 Score=191.68 Aligned_cols=252 Identities=11% Similarity=0.129 Sum_probs=152.2
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCC---CchhhHH-HhHhhhcCCcEEEEeccCCCCCCChhHHHHHHHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGID---GLGLGLI-LHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEET 231 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~---~s~~~~~-~~~~~L~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~ 231 (756)
+.+.||.......+.+.+. .+.|+|||+||++ ++...|. .+.+.|++.|.|+++|+||+|.++.....+|+.++
T Consensus 8 ~~~~dg~~l~~~~~~p~~~--~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~~~~~~~~~~~~~d~~~~ 85 (275)
T 3h04_A 8 VITKDAFALPYTIIKAKNQ--PTKGVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPEVSLDCIIEDVYAS 85 (275)
T ss_dssp EECTTSCEEEEEEECCSSS--SCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTTEEEEEECCCCTTTSCHHHHHHHHHHH
T ss_pred EecCCcEEEEEEEEccCCC--CCCCEEEEEECCcccCCchhhhHHHHHHHHHhCceEEeeccccCCccccchhHHHHHHH
Confidence 4456676654444444332 2478999999998 6666554 67778866699999999999999999889999888
Q ss_pred HHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcC
Q 004396 232 VRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMG 311 (756)
Q Consensus 232 i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (756)
++.+....+..+++|+||||||.+|+.+|.+ +.++++|+++|...................+.. ........+..
T Consensus 86 ~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 160 (275)
T 3h04_A 86 FDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQS---INETMIAQLTS 160 (275)
T ss_dssp HHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHHHTT---SCHHHHHTTSC
T ss_pred HHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhhccccc---chHHHHhcccC
Confidence 8888776667799999999999999999998 889999999997744221111000011000000 00000000000
Q ss_pred ChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCC
Q 004396 312 DPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDN 391 (756)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~ 391 (756)
.... ....................+...+.......... ......+.+++ |+|+++|++|.
T Consensus 161 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~-P~lii~G~~D~ 221 (275)
T 3h04_A 161 PTPV-----VQDQIAQRFLIYVYARGTGKWINMINIADYTDSKY-------------NIAPDELKTLP-PVFIAHCNGDY 221 (275)
T ss_dssp SSCC-----SSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGG-------------SCCHHHHTTCC-CEEEEEETTCS
T ss_pred CCCc-----CCCccccchhhhhhhhhcCchHHhhcccccccccc-------------ccccchhccCC-CEEEEecCCCC
Confidence 0000 00000000000000000000000000000000000 00012346677 99999999999
Q ss_pred CCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchh---hHHHHhh
Q 004396 392 MLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGI---SLLTIIK 434 (756)
Q Consensus 392 ~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~---~~~~~I~ 434 (756)
+++.+. ++.+.+.++++++++++++||.++.+.+. ++.+.+.
T Consensus 222 ~~~~~~-~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~ 266 (275)
T 3h04_A 222 DVPVEE-SEHIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVV 266 (275)
T ss_dssp SSCTHH-HHHHHTTCSSEEEEEECSSCSCTTSSCCHHHHHHHHHHH
T ss_pred CCChHH-HHHHHHhcCCceEEEeCCCCCCcccCCchhHHHHHHHHH
Confidence 999995 99999999999999999999999999985 5554444
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5e-21 Score=210.95 Aligned_cols=137 Identities=9% Similarity=0.099 Sum_probs=104.9
Q ss_pred hhHHHHhcCCCCccHHHHHHhhcccc-cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcC------
Q 004396 132 ELEVLWDDGYGTDSVKDYLDAAKEII-KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK------ 204 (756)
Q Consensus 132 ~~~~~~~~~~~~~~~~~y~~~~~~~~-~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~------ 204 (756)
.+-..|.++|..+..+..+.....+. ..+|.. ++|...|+..+++++|||+||++++...|..+++.|++
T Consensus 64 ~l~~~w~~~~dwr~~e~~ln~~~~~~~~i~g~~---i~~~~~~~~~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~ 140 (408)
T 3g02_A 64 TMREKWLSEFDWRPFEARLNSFPQFTTEIEGLT---IHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPET 140 (408)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTSCEEEEEETTEE---EEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTT
T ss_pred HHHHHHhhhcChHHHHHHHhcCCCEEEEECCEE---EEEEEecCCCCCCCeEEEECCCCCcHHHHHHHHHHHhccccccc
Confidence 46677888898666666665444443 336666 45554444334678999999999999999999999943
Q ss_pred -CcEEEEeccCCCCCC---------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeC
Q 004396 205 -AFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSN 274 (756)
Q Consensus 205 -gy~Vi~~Dl~G~G~S---------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~ 274 (756)
+|+|+++|+||||.| +++++++++.++++.++.. ++++++||||||.+++.+|.++|+.+..++.++
T Consensus 141 ~gf~vv~~DlpG~G~S~~~~~~~~~~~~~~a~~~~~l~~~lg~~---~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~ 217 (408)
T 3g02_A 141 LPFHLVVPSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFG---SGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFC 217 (408)
T ss_dssp CCEEEEEECCTTSTTSCCSCSSSCCCHHHHHHHHHHHHHHTTCT---TCEEEEECTHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CceEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---CCEEEeCCCchHHHHHHHHHhCCCceEEEEeCC
Confidence 789999999999988 4788999999999986532 279999999999999999999977554444443
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.1e-21 Score=199.84 Aligned_cols=214 Identities=15% Similarity=0.093 Sum_probs=142.1
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeCh
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDSF 251 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~ 251 (756)
+|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++.+. +.++++|+||||
T Consensus 51 ~~~lvllHG~~~~~~~~~~l~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~~~---~~~~~~lvG~S~ 127 (280)
T 3qmv_A 51 PLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHR---LTHDYALFGHSM 127 (280)
T ss_dssp SEEEEEECCTTCCGGGGTTHHHHHCTTEEEEECCCTTSGGGTTSCCCCSHHHHHHHHHHHHHHTT---CSSSEEEEEETH
T ss_pred CceEEEECCCCCChHHHHHHHHhcCCCceEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEeCH
Confidence 48899999999999999999999988999999999999987 68999999999999862 234899999999
Q ss_pred hhHHHHHHHHhCCCcce----EEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCCh
Q 004396 252 GGCLALAVAARNPTIDL----ILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (756)
Q Consensus 252 GG~vAl~~A~~~P~~v~----~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (756)
||.+|+.+|.++|+++. +++++++.......... . .......+. ..+......+....
T Consensus 128 Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~-~---~~~~~~~~~----~~~~~~~~~~~~~~---------- 189 (280)
T 3qmv_A 128 GALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRA-D---HTLSDTALR----EVIRDLGGLDDADT---------- 189 (280)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCC-G---GGSCHHHHH----HHHHHHTCCC--------------
T ss_pred hHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCccc-c---cccCHHHHH----HHHHHhCCCChhhh----------
Confidence 99999999999998776 88887764422111110 0 000000000 00000000000000
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC
Q 004396 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (756)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~ 407 (756)
....+.. .........+.....+....+..+++|+|+|+|++|.+++.+. .+.+.+.++
T Consensus 190 --~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~-~~~~~~~~~ 248 (280)
T 3qmv_A 190 --LGAAYFD------------------RRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEM-VEAWRPYTT 248 (280)
T ss_dssp -------CC------------------TTHHHHHHHHHHHHTCCCCCCCCBCSCEEEEEEEECSSSCHHH-HHTTGGGBS
T ss_pred --cCHHHHH------------------HHHHHHHHHHHHHHhccccCCCceecCeEEEEecCCCCcChHH-HHHHHHhcC
Confidence 0000000 0000000001111110112356889999999999999999985 888888888
Q ss_pred C-eEEEEEcCCCCcccc--cchhhHHHHhhh
Q 004396 408 N-CIVRNFKDNGHTLLL--EEGISLLTIIKG 435 (756)
Q Consensus 408 ~-~~l~~i~~aGH~~~~--e~p~~~~~~I~~ 435 (756)
+ .++++++ +||+.++ ++++++++.|.+
T Consensus 249 ~~~~~~~~~-ggH~~~~~~~~~~~~~~~i~~ 278 (280)
T 3qmv_A 249 GSFLRRHLP-GNHFFLNGGPSRDRLLAHLGT 278 (280)
T ss_dssp SCEEEEEEE-EETTGGGSSHHHHHHHHHHHT
T ss_pred CceEEEEec-CCCeEEcCchhHHHHHHHHHh
Confidence 6 4777777 5999999 999999999874
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=187.70 Aligned_cols=180 Identities=17% Similarity=0.192 Sum_probs=145.5
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHH--hHhhh-cCCcEEEEeccCCCCCC-------ChhHHH-
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLIL--HHKPL-GKAFEVRCLHIPVYDRT-------PFEGLV- 225 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~--~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a- 225 (756)
+..+|....+..+.+.+. +++|+|||+||++++...|.. +.+.| .+||.|+++|+||+|.| ++++++
T Consensus 12 ~~~~g~~l~~~~~~p~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 89 (210)
T 1imj_A 12 IQVQGQALFFREALPGSG--QARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAP 89 (210)
T ss_dssp EEETTEEECEEEEECSSS--CCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTSCCC
T ss_pred EeeCCeEEEEEEeCCCCC--CCCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCcchhhhcch
Confidence 344666644444433332 257899999999999999998 48888 56799999999999987 355666
Q ss_pred -HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHh
Q 004396 226 -KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (756)
Q Consensus 226 -~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (756)
+++..+++.+... +++++|||+||.+++.+|.++|++++++|+++|.....
T Consensus 90 ~~~~~~~~~~~~~~----~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------------------ 141 (210)
T 1imj_A 90 GSFLAAVVDALELG----PPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK------------------------ 141 (210)
T ss_dssp THHHHHHHHHHTCC----SCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG------------------------
T ss_pred HHHHHHHHHHhCCC----CeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc------------------------
Confidence 8899999887644 89999999999999999999999999999999853100
Q ss_pred HhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEE
Q 004396 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (756)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLv 384 (756)
. ....+.++++|+++
T Consensus 142 --------------------~---------------------------------------------~~~~~~~~~~p~l~ 156 (210)
T 1imj_A 142 --------------------I---------------------------------------------NAANYASVKTPALI 156 (210)
T ss_dssp --------------------S---------------------------------------------CHHHHHTCCSCEEE
T ss_pred --------------------c---------------------------------------------cchhhhhCCCCEEE
Confidence 0 00233567899999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 385 LASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 385 I~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
++|++|. ++.+. .+.+ +.++++++++++++||+.+.++++.+.+.|.
T Consensus 157 i~g~~D~-~~~~~-~~~~-~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~ 203 (210)
T 1imj_A 157 VYGDQDP-MGQTS-FEHL-KQLPNHRVLIMKGAGHPCYLDKPEEWHTGLL 203 (210)
T ss_dssp EEETTCH-HHHHH-HHHH-TTSSSEEEEEETTCCTTHHHHCHHHHHHHHH
T ss_pred EEcCccc-CCHHH-HHHH-hhCCCCCEEEecCCCcchhhcCHHHHHHHHH
Confidence 9999999 99885 8888 8899999999999999999999999888887
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=5.6e-20 Score=189.81 Aligned_cols=187 Identities=12% Similarity=0.052 Sum_probs=144.5
Q ss_pred CCCEEEEECCC---CCchhhHHHhHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhh
Q 004396 178 GSPTLLFLPGI---DGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (756)
Q Consensus 178 ~~p~lV~lHG~---~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG 253 (756)
+.|+|||+||. +++...|..+++.| ..||.|+++|+||+|..+++++++|+.++++.+..... .+++|+||||||
T Consensus 62 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~~~~~~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg 140 (262)
T 2pbl_A 62 PVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVTAAAKEID-GPIVLAGHSAGG 140 (262)
T ss_dssp CSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHSC-SCEEEEEETHHH
T ss_pred CCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCChHHHHHHHHHHHHHHHHhcc-CCEEEEEECHHH
Confidence 47899999994 47888898899988 57899999999999999999999999999999876543 589999999999
Q ss_pred HHHHHHHHhC------CCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCCh
Q 004396 254 CLALAVAARN------PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (756)
Q Consensus 254 ~vAl~~A~~~------P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (756)
.+|+.+|.++ |++++++|+++|....... .... ... .. ....
T Consensus 141 ~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~--------~~~~-------~~~----~~-------------~~~~ 188 (262)
T 2pbl_A 141 HLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPL--------LRTS-------MNE----KF-------------KMDA 188 (262)
T ss_dssp HHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGG--------GGST-------THH----HH-------------CCCH
T ss_pred HHHHHHhccccccccccccceEEEEecCccCchHH--------Hhhh-------hhh----hh-------------CCCH
Confidence 9999999988 8999999999986532110 0000 000 00 0000
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC
Q 004396 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (756)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~ 407 (756)
..... ......+.++++|+|+++|++|.+++.+. ++.+.+.++
T Consensus 189 ----~~~~~--------------------------------~~~~~~~~~~~~P~lii~G~~D~~~~~~~-~~~~~~~~~ 231 (262)
T 2pbl_A 189 ----DAAIA--------------------------------ESPVEMQNRYDAKVTVWVGGAERPAFLDQ-AIWLVEAWD 231 (262)
T ss_dssp ----HHHHH--------------------------------TCGGGCCCCCSCEEEEEEETTSCHHHHHH-HHHHHHHHT
T ss_pred ----HHHHh--------------------------------cCcccccCCCCCCEEEEEeCCCCcccHHH-HHHHHHHhC
Confidence 00000 00013456789999999999999999985 999999988
Q ss_pred CeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 408 NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 408 ~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+++++++++||+.++|++++.+..+.+
T Consensus 232 -~~~~~~~~~~H~~~~~~~~~~~~~l~~ 258 (262)
T 2pbl_A 232 -ADHVIAFEKHHFNVIEPLADPESDLVA 258 (262)
T ss_dssp -CEEEEETTCCTTTTTGGGGCTTCHHHH
T ss_pred -CeEEEeCCCCcchHHhhcCCCCcHHHH
Confidence 999999999999999999887777653
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-19 Score=193.04 Aligned_cols=100 Identities=11% Similarity=-0.004 Sum_probs=85.0
Q ss_pred CCCEEEEECCCCCchh---hHHHhHhhhcCCcEEEEec----cCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 178 GSPTLLFLPGIDGLGL---GLILHHKPLGKAFEVRCLH----IPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~---~~~~~~~~L~~gy~Vi~~D----l~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
++|+|||+||++++.. .|..+++.|+++|+|+++| +||||.|+..+.++|+.++++.+....+..+++|+|||
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L~~g~~Vi~~Dl~~D~~G~G~S~~~~~~~d~~~~~~~l~~~l~~~~~~LvGhS 116 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDHAHDAEDVDDLIGILLRDHCMNEVALFATS 116 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHHTTTCEEEEECCGGGBTTSCSCCHHHHHHHHHHHHHHHHHHSCCCCEEEEEEG
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHHHCCcEEEEEeccCCCCCCCCccccCcHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 4689999999987554 3677888898899999994 69999999888888988888876543445689999999
Q ss_pred hhhHHHHHHHH--hCCCcceEEEEeCCCC
Q 004396 251 FGGCLALAVAA--RNPTIDLILILSNPAT 277 (756)
Q Consensus 251 ~GG~vAl~~A~--~~P~~v~~lVLi~p~~ 277 (756)
|||.+|+.+|. .+|++|+++|+++|..
T Consensus 117 mGG~iAl~~A~~~~~p~rV~~lVL~~~~~ 145 (335)
T 2q0x_A 117 TGTQLVFELLENSAHKSSITRVILHGVVC 145 (335)
T ss_dssp GGHHHHHHHHHHCTTGGGEEEEEEEEECC
T ss_pred HhHHHHHHHHHhccchhceeEEEEECCcc
Confidence 99999999999 5799999999999864
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.3e-20 Score=180.10 Aligned_cols=176 Identities=18% Similarity=0.167 Sum_probs=132.0
Q ss_pred CCCEEEEECCCCCc---hhhHHH-hHhhhcC--CcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeCh
Q 004396 178 GSPTLLFLPGIDGL---GLGLIL-HHKPLGK--AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSF 251 (756)
Q Consensus 178 ~~p~lV~lHG~~~s---~~~~~~-~~~~L~~--gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~ 251 (756)
+.|+|||+||++++ ...|.. +.+.|++ +|+|+++|+||++.. ++.+++..+++.+.. .++++|+||||
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~~---~~~~~~~~~~~~l~~---~~~~~lvG~S~ 76 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITA---RESIWLPFMETELHC---DEKTIIIGHSS 76 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTTC---CHHHHHHHHHHTSCC---CTTEEEEEETH
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCcc---cHHHHHHHHHHHhCc---CCCEEEEEcCc
Confidence 47899999999998 456766 7788866 899999999998644 456677777777554 24899999999
Q ss_pred hhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHH
Q 004396 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKL 331 (756)
Q Consensus 252 GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (756)
||.+|+.+|.++| ++++|+++|...... .. . .....+...+
T Consensus 77 Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~----~~---~------------~~~~~~~~~~------------------ 117 (194)
T 2qs9_A 77 GAIAAMRYAETHR--VYAIVLVSAYTSDLG----DE---N------------ERASGYFTRP------------------ 117 (194)
T ss_dssp HHHHHHHHHHHSC--CSEEEEESCCSSCTT----CH---H------------HHHTSTTSSC------------------
T ss_pred HHHHHHHHHHhCC--CCEEEEEcCCccccc----hh---h------------hHHHhhhccc------------------
Confidence 9999999999998 999999998653210 00 0 0000000000
Q ss_pred HHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEE
Q 004396 332 EQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIV 411 (756)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l 411 (756)
. .. ..+..+.+|+++++|++|.++|.+. ++.+.+.+ ++++
T Consensus 118 --------------------~---~~---------------~~~~~~~~p~lii~G~~D~~vp~~~-~~~~~~~~-~~~~ 157 (194)
T 2qs9_A 118 --------------------W---QW---------------EKIKANCPYIVQFGSTDDPFLPWKE-QQEVADRL-ETKL 157 (194)
T ss_dssp --------------------C---CH---------------HHHHHHCSEEEEEEETTCSSSCHHH-HHHHHHHH-TCEE
T ss_pred --------------------c---cH---------------HHHHhhCCCEEEEEeCCCCcCCHHH-HHHHHHhc-CCeE
Confidence 0 00 1122345799999999999999995 89999888 9999
Q ss_pred EEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 412 RNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 412 ~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
++++++||+++.|+|+.+++++. |+.+
T Consensus 158 ~~~~~~gH~~~~~~p~~~~~~~~---fl~~ 184 (194)
T 2qs9_A 158 HKFTDCGHFQNTEFHELITVVKS---LLKV 184 (194)
T ss_dssp EEESSCTTSCSSCCHHHHHHHHH---HHTC
T ss_pred EEeCCCCCccchhCHHHHHHHHH---HHHh
Confidence 99999999999999999998874 6654
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.82 E-value=6.2e-20 Score=180.05 Aligned_cols=172 Identities=17% Similarity=0.155 Sum_probs=133.9
Q ss_pred CCCEEEEECCCCCchh-hHHHhHh-hh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhH
Q 004396 178 GSPTLLFLPGIDGLGL-GLILHHK-PL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGC 254 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~-~~~~~~~-~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~ 254 (756)
+.|+|||+||++++.. .|...+. .| +++|+|+++|+|..+..+++++++++.++++.+ .++++|+||||||.
T Consensus 3 g~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~G~S~Gg~ 77 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPRLEDWLDTLSLYQHTL-----HENTYLVAHSLGCP 77 (192)
T ss_dssp -CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCCHHHHHHHHHTTGGGC-----CTTEEEEEETTHHH
T ss_pred CCCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCCCCCCCCHHHHHHHHHHHHHhc-----cCCEEEEEeCccHH
Confidence 4577999999999998 7888775 58 789999999999666668999999999888875 24899999999999
Q ss_pred HHHHHHHhCCC--cceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHH
Q 004396 255 LALAVAARNPT--IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLE 332 (756)
Q Consensus 255 vAl~~A~~~P~--~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (756)
+++.+|.++|+ +++++|+++|...... . ++ .+ ..+...
T Consensus 78 ~a~~~a~~~~~~~~v~~~v~~~~~~~~~~-~----------~~--------~~-~~~~~~-------------------- 117 (192)
T 1uxo_A 78 AILRFLEHLQLRAALGGIILVSGFAKSLP-T----------LQ--------ML-DEFTQG-------------------- 117 (192)
T ss_dssp HHHHHHHTCCCSSCEEEEEEETCCSSCCT-T----------CG--------GG-GGGTCS--------------------
T ss_pred HHHHHHHHhcccCCccEEEEeccCCCccc-c----------ch--------hh-hhhhhc--------------------
Confidence 99999999999 9999999998653211 0 00 00 000000
Q ss_pred HHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEE
Q 004396 333 QLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVR 412 (756)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~ 412 (756)
+.+ ...+.++++|+++++|++|.++|.+. ++.+.+.+ +++++
T Consensus 118 --------------------~~~----------------~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~-~~~~~ 159 (192)
T 1uxo_A 118 --------------------SFD----------------HQKIIESAKHRAVIASKDDQIVPFSF-SKDLAQQI-DAALY 159 (192)
T ss_dssp --------------------CCC----------------HHHHHHHEEEEEEEEETTCSSSCHHH-HHHHHHHT-TCEEE
T ss_pred --------------------CCC----------------HHHHHhhcCCEEEEecCCCCcCCHHH-HHHHHHhc-CceEE
Confidence 000 02234556799999999999999995 89999998 99999
Q ss_pred EEcCCCCcccccchhhHHHH
Q 004396 413 NFKDNGHTLLLEEGISLLTI 432 (756)
Q Consensus 413 ~i~~aGH~~~~e~p~~~~~~ 432 (756)
+++++||+.+.++++.+.++
T Consensus 160 ~~~~~gH~~~~~~~~~~~~~ 179 (192)
T 1uxo_A 160 EVQHGGHFLEDEGFTSLPIV 179 (192)
T ss_dssp EETTCTTSCGGGTCSCCHHH
T ss_pred EeCCCcCcccccccccHHHH
Confidence 99999999999998766443
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.5e-19 Score=175.45 Aligned_cols=182 Identities=18% Similarity=0.151 Sum_probs=140.1
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECC-----CCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCC-----hhHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPG-----IDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-----FEGL 224 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG-----~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-----~~~~ 224 (756)
+...|| ......+.+.+. +..|+||++|| ...+...|..+.+.| ..+|.|+++|+||+|.|+ ....
T Consensus 11 ~~~~~g-~l~~~~~~p~~~--~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~ 87 (208)
T 3trd_A 11 IQGPVG-QLEVMITRPKGI--EKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRYDNGVGE 87 (208)
T ss_dssp EECSSS-EEEEEEECCSSC--CCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCTTTHH
T ss_pred EECCCc-eEEEEEEcCCCC--CCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCccchHHH
Confidence 445566 433333333322 24789999999 444455688888888 568999999999999984 3466
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHh
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (756)
.+|+.++++.+....+.++++++||||||.+++.+| .+| .++++|+++|....
T Consensus 88 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~------------------------- 140 (208)
T 3trd_A 88 VEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY------------------------- 140 (208)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS-------------------------
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccccc-------------------------
Confidence 788888888877665667999999999999999999 676 89999999985400
Q ss_pred HhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEE
Q 004396 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (756)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLv 384 (756)
. . ...+..+++|+++
T Consensus 141 --------~----------------------~-----------------------------------~~~~~~~~~p~l~ 155 (208)
T 3trd_A 141 --------E----------------------G-----------------------------------FASLTQMASPWLI 155 (208)
T ss_dssp --------G----------------------G-----------------------------------GTTCCSCCSCEEE
T ss_pred --------C----------------------C-----------------------------------chhhhhcCCCEEE
Confidence 0 0 0233556899999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhCCC-eEEEEEcCCCCcccccchhhHHHHhh
Q 004396 385 LASGKDNMLPSEDEAKRLNNSLQN-CIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 385 I~G~~D~~vp~~~~~~~l~~~l~~-~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
++|++|.+++.+. .+++.+.+++ +++++++++||+...+. +++.+.|.
T Consensus 156 i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~i~ 204 (208)
T 3trd_A 156 VQGDQDEVVPFEQ-VKAFVNQISSPVEFVVMSGASHFFHGRL-IELRELLV 204 (208)
T ss_dssp EEETTCSSSCHHH-HHHHHHHSSSCCEEEEETTCCSSCTTCH-HHHHHHHH
T ss_pred EECCCCCCCCHHH-HHHHHHHccCceEEEEeCCCCCcccccH-HHHHHHHH
Confidence 9999999999995 9999988886 99999999999998876 77777665
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.82 E-value=3.3e-19 Score=179.69 Aligned_cols=184 Identities=17% Similarity=0.166 Sum_probs=141.8
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCC------------------hhHHHHHHHHHHHHhhccC
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP------------------FEGLVKFVEETVRREHASS 239 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss------------------~~~~a~dv~~~i~~l~~~~ 239 (756)
+|+|||+||++++...|..+++.| .+||.|+++|+||+|.|+ +++.++|+.++++.+....
T Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 103 (238)
T 1ufo_A 24 KALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRF 103 (238)
T ss_dssp CEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCCcccchHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 789999999999999999999999 557999999999999883 3467888888888875432
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHH
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (756)
. .+++++|||+||.+|+.+|.++|+.+.+++++++........ ... .. +
T Consensus 104 ~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~------------------~------ 152 (238)
T 1ufo_A 104 G-LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQ--GQV----VE------------------D------ 152 (238)
T ss_dssp C-CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCT--TCC----CC------------------C------
T ss_pred C-CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhh--hhc----cC------------------C------
Confidence 2 589999999999999999999999999999988754221100 000 00 0
Q ss_pred hhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCC-CCcEEEEEeCCCCCCCCHHH
Q 004396 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAV-KAEVLVLASGKDNMLPSEDE 398 (756)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLvI~G~~D~~vp~~~~ 398 (756)
. + ...+ . . ......+.++ ++|+++++|++|.+++.+.
T Consensus 153 -------~-~-~~~~-~-----------------------------~--~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~- 190 (238)
T 1ufo_A 153 -------P-G-VLAL-Y-----------------------------Q--APPATRGEAYGGVPLLHLHGSRDHIVPLAR- 190 (238)
T ss_dssp -------H-H-HHHH-H-----------------------------H--SCGGGCGGGGTTCCEEEEEETTCTTTTHHH-
T ss_pred -------c-c-cchh-h-----------------------------c--CChhhhhhhccCCcEEEEECCCCCccCcHH-
Confidence 0 0 0000 0 0 0001345566 8999999999999999995
Q ss_pred HHHHHHhCC------CeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 399 AKRLNNSLQ------NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 399 ~~~l~~~l~------~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++.+.+.++ ++++++++++||..+.+.++.+.+.|.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~ 233 (238)
T 1ufo_A 191 MEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEH 233 (238)
T ss_dssp HHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHH
Confidence 999998888 8999999999999999999988888774
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-19 Score=173.75 Aligned_cols=165 Identities=16% Similarity=0.138 Sum_probs=131.6
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCc---EEEEeccCCCCCC---ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAF---EVRCLHIPVYDRT---PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy---~Vi~~Dl~G~G~S---s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
++|+|||+||++++...|..+++.| ..+| +|+++|+||+|.| +.+++++++.++++.+... +++|+|||
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~----~~~lvG~S 77 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETGAK----KVDIVAHS 77 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHHHHHHHHHHHHHHHHHHCCS----CEEEEEET
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHHHcCCCCccEEEEecCCCCCchhhhHHHHHHHHHHHHHHcCCC----eEEEEEEC
Confidence 4678999999999999999999999 5666 7999999999998 4778888888888876543 89999999
Q ss_pred hhhHHHHHHHHhC--CCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChH
Q 004396 251 FGGCLALAVAARN--PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (756)
Q Consensus 251 ~GG~vAl~~A~~~--P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (756)
|||.+++.++.++ |++++++|++++....... . ..
T Consensus 78 ~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~------------------------------~----------~~--- 114 (181)
T 1isp_A 78 MGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG------------------------------K----------AL--- 114 (181)
T ss_dssp HHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS------------------------------B----------CC---
T ss_pred ccHHHHHHHHHhcCCCceEEEEEEEcCccccccc------------------------------c----------cC---
Confidence 9999999999998 8999999999985421100 0 00
Q ss_pred HHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCC
Q 004396 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN 408 (756)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~ 408 (756)
+ ......++|+++++|++|.++|.+. . .+++
T Consensus 115 ------------------------~-------------------~~~~~~~~p~l~i~G~~D~~v~~~~-~-----~~~~ 145 (181)
T 1isp_A 115 ------------------------P-------------------GTDPNQKILYTSIYSSADMIVMNYL-S-----RLDG 145 (181)
T ss_dssp ------------------------C-------------------CSCTTCCCEEEEEEETTCSSSCHHH-H-----CCBT
T ss_pred ------------------------C-------------------CCCCccCCcEEEEecCCCccccccc-c-----cCCC
Confidence 0 0001235799999999999999873 2 3789
Q ss_pred eEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 409 CIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 409 ~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
+++++++++||+.+.++| ++.+.|. .|+.+
T Consensus 146 ~~~~~~~~~gH~~~~~~~-~~~~~i~--~fl~~ 175 (181)
T 1isp_A 146 ARNVQIHGVGHIGLLYSS-QVNSLIK--EGLNG 175 (181)
T ss_dssp SEEEEESSCCTGGGGGCH-HHHHHHH--HHHTT
T ss_pred CcceeeccCchHhhccCH-HHHHHHH--HHHhc
Confidence 999999999999999997 5777776 45544
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.8e-19 Score=180.48 Aligned_cols=168 Identities=16% Similarity=0.187 Sum_probs=135.1
Q ss_pred CCCEEEEECCCCCch-----hhHHHhHhhh-cCCcEEEEeccCCCCCCC------hhHHHHHHHHHHHHhhccCCC-CCE
Q 004396 178 GSPTLLFLPGIDGLG-----LGLILHHKPL-GKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASSPE-KPI 244 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~-----~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss------~~~~a~dv~~~i~~l~~~~~~-~~v 244 (756)
+.|+||++||+++.. ..|..+++.| ..+|.|+++|+||+|.|+ .+++ +|+.++++.+...... .++
T Consensus 46 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~-~d~~~~i~~l~~~~~~~~~i 124 (249)
T 2i3d_A 46 SAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGEL-SDAASALDWVQSLHPDSKSC 124 (249)
T ss_dssp TCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSSHHHH-HHHHHHHHHHHHHCTTCCCE
T ss_pred CCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCccchH-HHHHHHHHHHHHhCCCCCeE
Confidence 578999999984322 3457788888 668999999999999883 3444 8888888887765433 379
Q ss_pred EEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcC
Q 004396 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENR 324 (756)
Q Consensus 245 ~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (756)
+++||||||.+++.+|.++|+ ++++|+++|......
T Consensus 125 ~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~------------------------------------------- 160 (249)
T 2i3d_A 125 WVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD------------------------------------------- 160 (249)
T ss_dssp EEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC-------------------------------------------
T ss_pred EEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh-------------------------------------------
Confidence 999999999999999999998 999999998552100
Q ss_pred CChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHH
Q 004396 325 LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (756)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~ 404 (756)
...+.++++|+|+++|++|.+++.+. .+.+.+
T Consensus 161 -----------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~-~~~~~~ 192 (249)
T 2i3d_A 161 -----------------------------------------------FSFLAPCPSSGLIINGDADKVAPEKD-VNGLVE 192 (249)
T ss_dssp -----------------------------------------------CTTCTTCCSCEEEEEETTCSSSCHHH-HHHHHH
T ss_pred -----------------------------------------------hhhhcccCCCEEEEEcCCCCCCCHHH-HHHHHH
Confidence 02345678999999999999999995 888988
Q ss_pred hCC-----CeEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 405 SLQ-----NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 405 ~l~-----~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
.++ ++++++++++||..+ +.++++.+.+. .|+.+
T Consensus 193 ~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~i~--~fl~~ 231 (249)
T 2i3d_A 193 KLKTQKGILITHRTLPGANHFFN-GKVDELMGECE--DYLDR 231 (249)
T ss_dssp HHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHH--HHHHH
T ss_pred HHhhccCCceeEEEECCCCcccc-cCHHHHHHHHH--HHHHH
Confidence 887 789999999999998 78888888887 45543
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.6e-19 Score=184.76 Aligned_cols=213 Identities=17% Similarity=0.152 Sum_probs=140.3
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChh
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~G 252 (756)
++++|||+||++++...|..+.+ |+++|+|+++|+||++.+ +++++++++.++++.+.. .++++|+|||||
T Consensus 20 ~~~~lv~lhg~~~~~~~~~~~~~-l~~~~~v~~~d~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~l~GhS~G 95 (265)
T 3ils_A 20 ARKTLFMLPDGGGSAFSYASLPR-LKSDTAVVGLNCPYARDPENMNCTHGAMIESFCNEIRRRQP---RGPYHLGGWSSG 95 (265)
T ss_dssp SSEEEEEECCTTCCGGGGTTSCC-CSSSEEEEEEECTTTTCGGGCCCCHHHHHHHHHHHHHHHCS---SCCEEEEEETHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHh-cCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---CCCEEEEEECHh
Confidence 47899999999999999999999 999999999999999865 689999999999988642 248999999999
Q ss_pred hHHHHHHHH---hCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHH
Q 004396 253 GCLALAVAA---RNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (756)
Q Consensus 253 G~vAl~~A~---~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (756)
|.+|+.+|. .+|+.+.++|++++......... +......+..+ ......+.. ......+
T Consensus 96 g~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~ 157 (265)
T 3ils_A 96 GAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQL----------PRAFYEHCNSI-GLFATQPGA-------SPDGSTE 157 (265)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCC----------CHHHHHHHHHT-TTTTTSSSS-------CSSSCSC
T ss_pred HHHHHHHHHHHHhCCCCceEEEEEcCCCCCccccc----------CHHHHHHHHHH-HHhCCCccc-------cccCCHH
Confidence 999999998 67888999999987653221111 11011111110 000000000 0000000
Q ss_pred HHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEE-EEEeCC---CCCC------------
Q 004396 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVL-VLASGK---DNML------------ 393 (756)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL-vI~G~~---D~~v------------ 393 (756)
............+.....+.......+++|++ +++|++ |..+
T Consensus 158 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~ 215 (265)
T 3ils_A 158 ----------------------PPSYLIPHFTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQ 215 (265)
T ss_dssp ----------------------CCTTHHHHHHHHHHHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTS
T ss_pred ----------------------HHHHHHHHHHHHHHHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhc
Confidence 00000000000000000011123457899988 999999 9987
Q ss_pred --CCHHHHHHHHHhCC--CeEEEEEcCCCCccc--ccchhhHHHHhhh
Q 004396 394 --PSEDEAKRLNNSLQ--NCIVRNFKDNGHTLL--LEEGISLLTIIKG 435 (756)
Q Consensus 394 --p~~~~~~~l~~~l~--~~~l~~i~~aGH~~~--~e~p~~~~~~I~~ 435 (756)
+.. ....+.+..+ ++++++++|+||+.+ .|+++++++.|.+
T Consensus 216 ~~~~~-~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~ 262 (265)
T 3ils_A 216 KRTEF-GPDGWDTIMPGASFDIVRADGANHFTLMQKEHVSIISDLIDR 262 (265)
T ss_dssp CCCCC-SCTTHHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHH
T ss_pred ccccc-CcchHHHhCCccceeEEEcCCCCcceeeChhhHHHHHHHHHH
Confidence 333 2455566665 899999999999999 9999999999974
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.8e-19 Score=170.22 Aligned_cols=158 Identities=18% Similarity=0.221 Sum_probs=127.3
Q ss_pred CCCEEEEECCCCCchhhHH--HhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCCCCCEEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLI--LHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~--~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~Lv 247 (756)
++|+|||+||++++...|. .+.+.| ..+|.|+++|+||+|.| ++.+.++++.+.++... +.++++++
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~ 79 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQRLLEIARAAT---EKGPVVLA 79 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCTTCCHHHHHHHHHHHHHHHH---TTSCEEEE
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC---CCCCEEEE
Confidence 4789999999999887555 788888 56899999999999987 35555666666665543 23589999
Q ss_pred EeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCCh
Q 004396 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (756)
||||||.+|+.+|.++| ++++|+++|.......
T Consensus 80 G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~--------------------------------------------- 112 (176)
T 2qjw_A 80 GSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL--------------------------------------------- 112 (176)
T ss_dssp EETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB---------------------------------------------
T ss_pred EECHHHHHHHHHHHhcC--hhheEEECCcCCcccc---------------------------------------------
Confidence 99999999999999998 9999999986532100
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC
Q 004396 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (756)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~ 407 (756)
..+..+++|+++++|++|.+++.+. .+.+.+.+
T Consensus 113 ---------------------------------------------~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~- 145 (176)
T 2qjw_A 113 ---------------------------------------------PALDAAAVPISIVHAWHDELIPAAD-VIAWAQAR- 145 (176)
T ss_dssp ---------------------------------------------CCCCCCSSCEEEEEETTCSSSCHHH-HHHHHHHH-
T ss_pred ---------------------------------------------CcccccCCCEEEEEcCCCCccCHHH-HHHHHHhC-
Confidence 0035678999999999999999995 88888877
Q ss_pred CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 408 NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 408 ~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
+++++++ ++||... +.++++.+.+.
T Consensus 146 ~~~~~~~-~~~H~~~-~~~~~~~~~i~ 170 (176)
T 2qjw_A 146 SARLLLV-DDGHRLG-AHVQAASRAFA 170 (176)
T ss_dssp TCEEEEE-SSCTTCT-TCHHHHHHHHH
T ss_pred CceEEEe-CCCcccc-ccHHHHHHHHH
Confidence 7899999 8999984 78888888776
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.6e-19 Score=173.26 Aligned_cols=160 Identities=15% Similarity=0.181 Sum_probs=129.5
Q ss_pred CCEEEEECCCCCch-hhHHHhHhhhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHH
Q 004396 179 SPTLLFLPGIDGLG-LGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (756)
Q Consensus 179 ~p~lV~lHG~~~s~-~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl 257 (756)
+|+|||+||++++. ..|......+.. .++.+|++|++..+++++++++.++++.+. ++++++||||||.+++
T Consensus 17 ~~~vv~~HG~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~ 89 (191)
T 3bdv_A 17 QLTMVLVPGLRDSDDEHWQSHWERRFP--HWQRIRQREWYQADLDRWVLAIRRELSVCT-----QPVILIGHSFGALAAC 89 (191)
T ss_dssp TCEEEEECCTTCCCTTSHHHHHHHHCT--TSEECCCSCCSSCCHHHHHHHHHHHHHTCS-----SCEEEEEETHHHHHHH
T ss_pred CceEEEECCCCCCchhhHHHHHHHhcC--CeEEEeccCCCCcCHHHHHHHHHHHHHhcC-----CCeEEEEEChHHHHHH
Confidence 68999999999988 678777665422 346789999999999999999999998743 4899999999999999
Q ss_pred HHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhh
Q 004396 258 AVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNN 337 (756)
Q Consensus 258 ~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (756)
.+|.++|++++++|+++|...... .+ +
T Consensus 90 ~~a~~~p~~v~~lvl~~~~~~~~~-----------~~------------------~------------------------ 116 (191)
T 3bdv_A 90 HVVQQGQEGIAGVMLVAPAEPMRF-----------EI------------------D------------------------ 116 (191)
T ss_dssp HHHHTTCSSEEEEEEESCCCGGGG-----------TC------------------T------------------------
T ss_pred HHHHhcCCCccEEEEECCCccccc-----------cC------------------c------------------------
Confidence 999999999999999998553210 00 0
Q ss_pred hhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCC
Q 004396 338 LPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDN 417 (756)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~a 417 (756)
. ...+.++++|+++++|++|.++|.+. ++.+.+.+ ++++++++++
T Consensus 117 ----------------~-----------------~~~~~~~~~P~lii~g~~D~~~~~~~-~~~~~~~~-~~~~~~~~~~ 161 (191)
T 3bdv_A 117 ----------------D-----------------RIQASPLSVPTLTFASHNDPLMSFTR-AQYWAQAW-DSELVDVGEA 161 (191)
T ss_dssp ----------------T-----------------TSCSSCCSSCEEEEECSSBTTBCHHH-HHHHHHHH-TCEEEECCSC
T ss_pred ----------------c-----------------ccccccCCCCEEEEecCCCCcCCHHH-HHHHHHhc-CCcEEEeCCC
Confidence 0 03356788999999999999999995 88888877 8999999999
Q ss_pred CCccccc----chhhHHHHhh
Q 004396 418 GHTLLLE----EGISLLTIIK 434 (756)
Q Consensus 418 GH~~~~e----~p~~~~~~I~ 434 (756)
||+.+.+ .|+.+ +.|.
T Consensus 162 gH~~~~~~~~~~~~~~-~~i~ 181 (191)
T 3bdv_A 162 GHINAEAGFGPWEYGL-KRLA 181 (191)
T ss_dssp TTSSGGGTCSSCHHHH-HHHH
T ss_pred CcccccccchhHHHHH-HHHH
Confidence 9999984 45554 5554
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=178.50 Aligned_cols=168 Identities=17% Similarity=0.199 Sum_probs=135.8
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEe--ccCCCCCCC--------------hhHHHHHHHHHHHHhhccCCC
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCL--HIPVYDRTP--------------FEGLVKFVEETVRREHASSPE 241 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~--Dl~G~G~Ss--------------~~~~a~dv~~~i~~l~~~~~~ 241 (756)
+.|+||++||++++...|..+++.|+++|.|+++ |++|+|.|+ +.+.++++.++++.+......
T Consensus 61 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 140 (251)
T 2r8b_A 61 GAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREHYQA 140 (251)
T ss_dssp TSCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcEEEEEeCCCCCHhHHHHHHHhcCCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCC
Confidence 4799999999999999999999999888999999 899998662 233456666666665332244
Q ss_pred CCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhh
Q 004396 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNI 321 (756)
Q Consensus 242 ~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (756)
.+++++||||||.+|+.+|.++|++++++|+++|......
T Consensus 141 ~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~---------------------------------------- 180 (251)
T 2r8b_A 141 GPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP---------------------------------------- 180 (251)
T ss_dssp CSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC----------------------------------------
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc----------------------------------------
Confidence 5899999999999999999999999999999998653210
Q ss_pred hcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHH
Q 004396 322 ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKR 401 (756)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~ 401 (756)
......+++|+|+++|++|.+++.+. ++.
T Consensus 181 --------------------------------------------------~~~~~~~~~P~li~~g~~D~~~~~~~-~~~ 209 (251)
T 2r8b_A 181 --------------------------------------------------KISPAKPTRRVLITAGERDPICPVQL-TKA 209 (251)
T ss_dssp --------------------------------------------------CCCCCCTTCEEEEEEETTCTTSCHHH-HHH
T ss_pred --------------------------------------------------cccccccCCcEEEeccCCCccCCHHH-HHH
Confidence 01113457899999999999999985 899
Q ss_pred HHHhCC--CeEEE-EEcCCCCcccccchhhHHHHhhhc
Q 004396 402 LNNSLQ--NCIVR-NFKDNGHTLLLEEGISLLTIIKGT 436 (756)
Q Consensus 402 l~~~l~--~~~l~-~i~~aGH~~~~e~p~~~~~~I~~~ 436 (756)
+.+.++ +.++. .++++||..+.+.++.+.+.|.+.
T Consensus 210 ~~~~l~~~~~~~~~~~~~~gH~~~~~~~~~~~~~l~~~ 247 (251)
T 2r8b_A 210 LEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFLAAY 247 (251)
T ss_dssp HHHHHHHHSSEEEEEEESSCSSCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHHHHh
Confidence 998887 66766 788899999999998888888743
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-19 Score=183.77 Aligned_cols=211 Identities=18% Similarity=0.261 Sum_probs=126.3
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC---hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCL 255 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss---~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~v 255 (756)
+++|||+||++++...|..+++.|+++|+|+++|+||||.|+ .+++.+.+.++++.++. .+.++++|+||||||.+
T Consensus 13 ~~~lv~lhg~g~~~~~~~~~~~~L~~~~~vi~~Dl~GhG~S~~~~~~~~~~~~~~~~~~l~~-~~~~~~~lvGhSmGG~i 91 (242)
T 2k2q_B 13 KTQLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPGHGTNQTSAIEDLEELTDLYKQELNL-RPDRPFVLFGHSMGGMI 91 (242)
T ss_dssp CCEEESSCCCCHHHHHHHHHHHHHCCSCCCEEEECCSSCCSCCCTTTHHHHHHHHTTTTCCC-CCCSSCEEECCSSCCHH
T ss_pred CceEEEECCCCCCHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCCcCCHHHHHHHHHHHHHh-hcCCCEEEEeCCHhHHH
Confidence 678999999999999999999999889999999999999984 44444444444444322 12358999999999999
Q ss_pred HHHHHHh------CCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHH
Q 004396 256 ALAVAAR------NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (756)
Q Consensus 256 Al~~A~~------~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (756)
|+.+|.+ +|+. +++.+............ .... ......+.. ....+ ....
T Consensus 92 A~~~A~~~~~~~~~p~~---v~l~~~~~~~~~~~~~~------~~~~--~~~~~~~~~-~~~~~---------~~~~--- 147 (242)
T 2k2q_B 92 TFRLAQKLEREGIFPQA---VIISAIQPPHIQRKKVS------HLPD--DQFLDHIIQ-LGGMP---------AELV--- 147 (242)
T ss_dssp HHHHHHHHHHHHCSSCS---EEEEEEECSCCCSCCCS------SCTT--HHHHHTTCC-TTCCC---------CTTT---
T ss_pred HHHHHHHHHHcCCCCCE---EEEECCCCCCCCccccc------CCCH--HHHHHHHHH-hCCCC---------hHHh---
Confidence 9999987 5654 34432111000000000 0000 000000000 00000 0000
Q ss_pred HHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCe
Q 004396 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC 409 (756)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~ 409 (756)
....... ... .......... .......+.++++|+|+|+|++|..++ . ..+.+.+..++.
T Consensus 148 ~~~~~~~--------------~~~-~~~~~~~~~~---~~~~~~~l~~i~~P~lvi~G~~D~~~~-~-~~~~~~~~~~~~ 207 (242)
T 2k2q_B 148 ENKEVMS--------------FFL-PSFRSDYRAL---EQFELYDLAQIQSPVHVFNGLDDKKCI-R-DAEGWKKWAKDI 207 (242)
T ss_dssp HHHHTTT--------------TCC-SCHHHHHHHH---TCCCCSCCTTCCCSEEEEEECSSCCHH-H-HHHHHHTTCCCS
T ss_pred cCHHHHH--------------HHH-HHHHHHHHHH---HhcccCCCCccCCCEEEEeeCCCCcCH-H-HHHHHHHHhcCC
Confidence 0000000 000 0111110100 000012367899999999999999865 3 266677778888
Q ss_pred EEEEEcCCCCcccccchhhHHHHhhh
Q 004396 410 IVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 410 ~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++++++ +||+.++|+|+.+++.|.+
T Consensus 208 ~~~~~~-~gH~~~~e~p~~~~~~i~~ 232 (242)
T 2k2q_B 208 TFHQFD-GGHMFLLSQTEEVAERIFA 232 (242)
T ss_dssp EEEEEE-CCCSHHHHHCHHHHHHHHH
T ss_pred eEEEEe-CCceeEcCCHHHHHHHHHH
Confidence 898998 4999999999999999983
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.3e-19 Score=184.37 Aligned_cols=194 Identities=16% Similarity=0.195 Sum_probs=140.8
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccC--CCCCEEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASS--PEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~--~~~~v~Lv 247 (756)
..|+|||+||++++...|..+++.|. .+|.|+++|+||+|.| +++++++|+.++++.+.... +.++++|+
T Consensus 27 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~ 106 (290)
T 3ksr_A 27 GMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVV 106 (290)
T ss_dssp SEEEEEEECCTTCCTTTTHHHHHHHHTTTCEEECCCCTTSGGGGGGTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEE
T ss_pred CCcEEEEeCCCCCCcCcHHHHHHHHHHCCCEEEEeecCCCCCCCCCcccccHHHHHHHHHHHHHHHHhcCCCCccceEEE
Confidence 37899999999999999999999994 5899999999999988 57889999999999986542 13489999
Q ss_pred EeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCCh
Q 004396 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (756)
||||||.+++.+|.++| +.++++++|....... +.. +.........
T Consensus 107 G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~-~~~--------~~~~~~~~~~----------------------- 152 (290)
T 3ksr_A 107 GLSYGGYLSALLTRERP--VEWLALRSPALYKDAH-WDQ--------PKVSLNADPD----------------------- 152 (290)
T ss_dssp EETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSC-TTS--------BHHHHHHSTT-----------------------
T ss_pred EEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhh-hhc--------ccccccCChh-----------------------
Confidence 99999999999999988 8899999886643221 110 0000000000
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC
Q 004396 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (756)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~ 407 (756)
...+.... ..... ......+.++++|+|+++|++|.+++.+. .+.+.+.++
T Consensus 153 ---~~~~~~~~-------------~~~~~------------~~~~~~~~~~~~P~lii~G~~D~~v~~~~-~~~~~~~~~ 203 (290)
T 3ksr_A 153 ---LMDYRRRA-------------LAPGD------------NLALAACAQYKGDVLLVEAENDVIVPHPV-MRNYADAFT 203 (290)
T ss_dssp ---HHHHTTSC-------------CCGGG------------CHHHHHHHHCCSEEEEEEETTCSSSCHHH-HHHHHHHTT
T ss_pred ---hhhhhhhh-------------hhhcc------------ccHHHHHHhcCCCeEEEEecCCcccChHH-HHHHHHHhc
Confidence 00000000 00000 00013446788999999999999999995 899999887
Q ss_pred C---eEEEEEcCCCCccccc-chhhHHHHhh
Q 004396 408 N---CIVRNFKDNGHTLLLE-EGISLLTIIK 434 (756)
Q Consensus 408 ~---~~l~~i~~aGH~~~~e-~p~~~~~~I~ 434 (756)
+ +++++++++||.++.+ .++.+.+.+.
T Consensus 204 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 234 (290)
T 3ksr_A 204 NARSLTSRVIAGADHALSVKEHQQEYTRALI 234 (290)
T ss_dssp TSSEEEEEEETTCCTTCCSHHHHHHHHHHHH
T ss_pred cCCCceEEEcCCCCCCCCcchHHHHHHHHHH
Confidence 5 4599999999987654 7777777776
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.3e-19 Score=191.56 Aligned_cols=100 Identities=27% Similarity=0.313 Sum_probs=86.2
Q ss_pred CCCEEEEECCCCCchhhHH----------------HhHhhh-cCCcEEEEeccCCCCCCC--------------hhHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLI----------------LHHKPL-GKAFEVRCLHIPVYDRTP--------------FEGLVK 226 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~----------------~~~~~L-~~gy~Vi~~Dl~G~G~Ss--------------~~~~a~ 226 (756)
++|+|||+||++++...|. .+++.| .+||+|+++|+||||.|+ ++++++
T Consensus 49 ~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 128 (354)
T 2rau_A 49 GNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWIS 128 (354)
T ss_dssp CEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHHH
T ss_pred CCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHHH
Confidence 3789999999999998776 788888 458999999999999883 377889
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC-CCcceEEEEeCCCC
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPAT 277 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~-P~~v~~lVLi~p~~ 277 (756)
|+.++++.+....+.++++++||||||.+++.+|.++ |++++++|++++..
T Consensus 129 d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~ 180 (354)
T 2rau_A 129 DIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGP 180 (354)
T ss_dssp HHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSC
T ss_pred HHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccc
Confidence 9999999865443445899999999999999999999 99999999997654
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.1e-18 Score=172.98 Aligned_cols=175 Identities=18% Similarity=0.193 Sum_probs=137.6
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC---------------
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------------- 219 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------------- 219 (756)
+.+.||.......+.+.+ ...|+||++||++++...|..+++.| ..+|.|+++|+||+|.|
T Consensus 8 ~~~~~g~~l~~~~~~p~~---~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 84 (236)
T 1zi8_A 8 IQSYDGHTFGALVGSPAK---APAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQA 84 (236)
T ss_dssp EECTTSCEECEEEECCSS---CSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHHHHH
T ss_pred EecCCCCeEEEEEECCCC---CCCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhhhhh
Confidence 444566554433333332 24789999999999999999999999 56999999999999976
Q ss_pred -------ChhHHHHHHHHHHHHhhccCC-CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHH
Q 004396 220 -------PFEGLVKFVEETVRREHASSP-EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPIL 291 (756)
Q Consensus 220 -------s~~~~a~dv~~~i~~l~~~~~-~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~ 291 (756)
+.++.++|+.++++.+..... ..+++++|||+||.+++.+|.++| +++++++.|....
T Consensus 85 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~------------ 150 (236)
T 1zi8_A 85 YKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE------------ 150 (236)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG------------
T ss_pred hhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc------------
Confidence 245568899999999875543 358999999999999999999998 8888887762200
Q ss_pred hhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHH
Q 004396 292 KAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA 371 (756)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (756)
+ .
T Consensus 151 --------------------------------------------~----------------------------------~ 152 (236)
T 1zi8_A 151 --------------------------------------------K----------------------------------Q 152 (236)
T ss_dssp --------------------------------------------G----------------------------------C
T ss_pred --------------------------------------------c----------------------------------c
Confidence 0 0
Q ss_pred hhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhC---CCeEEEEEcCCCCcccccch
Q 004396 372 NSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL---QNCIVRNFKDNGHTLLLEEG 426 (756)
Q Consensus 372 ~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l---~~~~l~~i~~aGH~~~~e~p 426 (756)
...+.++++|+++++|++|.+++.+. .+.+.+.+ +++++++++++||....+.+
T Consensus 153 ~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 209 (236)
T 1zi8_A 153 LNKVPEVKHPALFHMGGQDHFVPAPS-RQLITEGFGANPLLQVHWYEEAGHSFARTGS 209 (236)
T ss_dssp GGGGGGCCSCEEEEEETTCTTSCHHH-HHHHHHHHTTCTTEEEEEETTCCTTTTCTTS
T ss_pred hhhhhhcCCCEEEEecCCCCCCCHHH-HHHHHHHHHhCCCceEEEECCCCcccccCCC
Confidence 13446678999999999999999985 88888877 68999999999998887765
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-18 Score=177.03 Aligned_cols=161 Identities=13% Similarity=0.117 Sum_probs=130.4
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhc------cCCCCCEEEEEeC
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHA------SSPEKPIYLVGDS 250 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~------~~~~~~v~LvGhS 250 (756)
..|+|||+||++++...|..+++.| .++|.|+++|++|+|.+.. ...+|+.+.++.+.. .....+++|+|||
T Consensus 53 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~-~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S 131 (262)
T 1jfr_A 53 TFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPD-SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHS 131 (262)
T ss_dssp CEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHH-HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEET
T ss_pred CCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCCCCCCCCc-hhHHHHHHHHHHHHhccccccccCcccEEEEEEC
Confidence 4689999999999999999999999 6689999999999998742 223344444443322 1223589999999
Q ss_pred hhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHH
Q 004396 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (756)
Q Consensus 251 ~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (756)
|||.+++.+|.++|+ ++++|+++|...
T Consensus 132 ~Gg~~a~~~a~~~p~-v~~~v~~~p~~~---------------------------------------------------- 158 (262)
T 1jfr_A 132 MGGGGSLEAAKSRTS-LKAAIPLTGWNT---------------------------------------------------- 158 (262)
T ss_dssp HHHHHHHHHHHHCTT-CSEEEEESCCCS----------------------------------------------------
T ss_pred hhHHHHHHHHhcCcc-ceEEEeecccCc----------------------------------------------------
Confidence 999999999999988 899999987321
Q ss_pred HHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHH-HHHHHHhCCC-
Q 004396 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE-AKRLNNSLQN- 408 (756)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~-~~~l~~~l~~- 408 (756)
...+.++++|+|+++|++|.+++.+ . .+.+.+.+++
T Consensus 159 -----------------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~l~~~ 196 (262)
T 1jfr_A 159 -----------------------------------------DKTWPELRTPTLVVGADGDTVAPVA-THSKPFYESLPGS 196 (262)
T ss_dssp -----------------------------------------CCCCTTCCSCEEEEEETTCSSSCTT-TTHHHHHHHSCTT
T ss_pred -----------------------------------------cccccccCCCEEEEecCccccCCch-hhHHHHHHHhhcC
Confidence 0334567899999999999999988 5 7888888864
Q ss_pred --eEEEEEcCCCCcccccchhhHHHHhh
Q 004396 409 --CIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 409 --~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
.++++++++||..+.+.++++.+.+.
T Consensus 197 ~~~~~~~~~~~~H~~~~~~~~~~~~~i~ 224 (262)
T 1jfr_A 197 LDKAYLELRGASHFTPNTSDTTIAKYSI 224 (262)
T ss_dssp SCEEEEEETTCCTTGGGSCCHHHHHHHH
T ss_pred CCceEEEeCCCCcCCcccchHHHHHHHH
Confidence 49999999999999999988888887
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.78 E-value=5.3e-18 Score=170.79 Aligned_cols=172 Identities=16% Similarity=0.166 Sum_probs=135.8
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEe-------------------ccCCCCCC------ChhHHHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCL-------------------HIPVYDRT------PFEGLVKFVEET 231 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~-------------------Dl~G~G~S------s~~~~a~dv~~~ 231 (756)
..|+|||+||++++...|..+.+.|. .+|.|+++ |++|+... +++++++++.++
T Consensus 22 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~~~~~~~~~~~~~~~ 101 (232)
T 1fj2_A 22 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKAL 101 (232)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCccchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccCCcccccccHHHHHHHHHHHHH
Confidence 47899999999999999999999996 59999997 77777222 377888899999
Q ss_pred HHHhhcc-CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhc
Q 004396 232 VRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (756)
Q Consensus 232 i~~l~~~-~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (756)
++.+... ...++++++||||||.+|+.+|.++|+.++++|+++|....... .
T Consensus 102 i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~-----------~---------------- 154 (232)
T 1fj2_A 102 IDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS-----------F---------------- 154 (232)
T ss_dssp HHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG-----------S----------------
T ss_pred HHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc-----------c----------------
Confidence 9887431 11258999999999999999999999999999999985422100 0
Q ss_pred CChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCC
Q 004396 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (756)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D 390 (756)
+ . ....+..+++|+++++|++|
T Consensus 155 --~----------~----------------------------------------------~~~~~~~~~~P~l~i~G~~D 176 (232)
T 1fj2_A 155 --P----------Q----------------------------------------------GPIGGANRDISILQCHGDCD 176 (232)
T ss_dssp --C----------S----------------------------------------------SCCCSTTTTCCEEEEEETTC
T ss_pred --c----------c----------------------------------------------cccccccCCCCEEEEecCCC
Confidence 0 0 00234667899999999999
Q ss_pred CCCCCHHHHHHHHHhC------CCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 391 NMLPSEDEAKRLNNSL------QNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 391 ~~vp~~~~~~~l~~~l------~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.+++.+. ++.+.+.+ +++++++++++||..+.|..+.+.+.+.+
T Consensus 177 ~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~~~i~~~l~~ 226 (232)
T 1fj2_A 177 PLVPLMF-GSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDK 226 (232)
T ss_dssp SSSCHHH-HHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred ccCCHHH-HHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHHHHHHHHHHH
Confidence 9999984 77777666 56999999999999988877777766653
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.2e-18 Score=182.22 Aligned_cols=222 Identities=15% Similarity=0.097 Sum_probs=143.7
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCCh--------------
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPF-------------- 221 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss~-------------- 221 (756)
+...+|..+....+.+.+. ...|+||++||++++...|..+...++.+|.|+++|+||+|.|+.
T Consensus 87 ~~~~~g~~l~~~~~~P~~~--~~~p~vv~~HG~g~~~~~~~~~~~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~~ 164 (346)
T 3fcy_A 87 FTGVRGARIHAKYIKPKTE--GKHPALIRFHGYSSNSGDWNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHI 164 (346)
T ss_dssp EECGGGCEEEEEEEEESCS--SCEEEEEEECCTTCCSCCSGGGHHHHTTTCEEEEECCTTSSSSCCCCCCCSSCCSBCSS
T ss_pred EEcCCCCEEEEEEEecCCC--CCcCEEEEECCCCCCCCChhhhhHHHhCCcEEEEEcCCCCCCCCCCCcccCCCCcCcce
Confidence 3444665544444444432 247899999999999999988887778999999999999998742
Q ss_pred -------------hHHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCC
Q 004396 222 -------------EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP 286 (756)
Q Consensus 222 -------------~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~ 286 (756)
..+.+|+..+++.+.... ...+++++|||+||.+|+.+|..+|+ ++++|+++|....
T Consensus 165 ~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~------- 236 (346)
T 3fcy_A 165 IRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSD------- 236 (346)
T ss_dssp STTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCC-------
T ss_pred eccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccC-------
Confidence 245677777777665432 23589999999999999999999998 9999999885421
Q ss_pred chhHHhhc-hhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHH
Q 004396 287 LFPILKAM-PDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK 365 (756)
Q Consensus 287 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (756)
........ .......+..++... .+ ... ....... .+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~--~~---------~~~----~~~~~~~--------------------------~~~ 275 (346)
T 3fcy_A 237 YKRVWDLDLAKNAYQEITDYFRLF--DP---------RHE----RENEVFT--------------------------KLG 275 (346)
T ss_dssp HHHHHHTTCCCGGGHHHHHHHHHH--CT---------TCT----THHHHHH--------------------------HHG
T ss_pred HHHHhhccccccchHHHHHHHHhc--CC---------Ccc----hHHHHHH--------------------------HhC
Confidence 10011000 000000000000000 00 000 0000000 000
Q ss_pred HHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC-CeEEEEEcCCCCcccccchhhHHH
Q 004396 366 SASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLEEGISLLT 431 (756)
Q Consensus 366 ~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~-~~~l~~i~~aGH~~~~e~p~~~~~ 431 (756)
. .+....+.++++|+|+++|++|.+++++. +..+.+.++ ++++++++++||..+.+..+.+.+
T Consensus 276 ~--~d~~~~~~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~i~~ 339 (346)
T 3fcy_A 276 Y--IDVKNLAKRIKGDVLMCVGLMDQVCPPST-VFAAYNNIQSKKDIKVYPDYGHEPMRGFGDLAMQ 339 (346)
T ss_dssp G--GCHHHHGGGCCSEEEEEEETTCSSSCHHH-HHHHHTTCCSSEEEEEETTCCSSCCTTHHHHHHH
T ss_pred c--ccHHHHHHhcCCCEEEEeeCCCCcCCHHH-HHHHHHhcCCCcEEEEeCCCCCcCHHHHHHHHHH
Confidence 0 01124567889999999999999999995 889998887 799999999999998333333333
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.8e-18 Score=171.39 Aligned_cols=179 Identities=14% Similarity=0.083 Sum_probs=139.2
Q ss_pred CCCCceeeeeccCCCCCCCCCEEEEECCCCCchhh--HHHhHhhh-cCCcEEEEeccCCCCCC-----------ChhHHH
Q 004396 160 DGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLG--LILHHKPL-GKAFEVRCLHIPVYDRT-----------PFEGLV 225 (756)
Q Consensus 160 dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~--~~~~~~~L-~~gy~Vi~~Dl~G~G~S-----------s~~~~a 225 (756)
+|.......+.+.+ ..|+||++||++++... +..+.+.| .+||.|+++|+||+|.| ++++++
T Consensus 20 ~g~~l~~~~~~p~~----~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~ 95 (223)
T 2o2g_A 20 GEVKLKGNLVIPNG----ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFDIGLLA 95 (223)
T ss_dssp TTEEEEEEEECCTT----CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCSSTTCHHHHH
T ss_pred CCeEEEEEEecCCC----CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhcccCcHHHHH
Confidence 55554433333333 37899999999998885 45677888 56899999999999974 677888
Q ss_pred HHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHH
Q 004396 226 KFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303 (756)
Q Consensus 226 ~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (756)
+|+.++++.+.... ...+++++|||+||.+++.+|.++|+.++++|++++.....
T Consensus 96 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~----------------------- 152 (223)
T 2o2g_A 96 SRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA----------------------- 152 (223)
T ss_dssp HHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC-----------------------
T ss_pred HHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC-----------------------
Confidence 99999999887653 24489999999999999999999999999999998732100
Q ss_pred hHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEE
Q 004396 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVL 383 (756)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 383 (756)
...+.++++|++
T Consensus 153 --------------------------------------------------------------------~~~~~~~~~P~l 164 (223)
T 2o2g_A 153 --------------------------------------------------------------------PSALPHVKAPTL 164 (223)
T ss_dssp --------------------------------------------------------------------TTTGGGCCSCEE
T ss_pred --------------------------------------------------------------------HHHHhcCCCCEE
Confidence 023456789999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccc-cchhhHHHHhh
Q 004396 384 VLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLL-EEGISLLTIIK 434 (756)
Q Consensus 384 vI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~-e~p~~~~~~I~ 434 (756)
+++|++|.+++.+. .+.+.+..+++++++++++||.... +.++++.+.+.
T Consensus 165 ~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 215 (223)
T 2o2g_A 165 LIVGGYDLPVIAMN-EDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQLAS 215 (223)
T ss_dssp EEEETTCHHHHHHH-HHHHHHCCSSEEEEEETTCCTTCCSTTHHHHHHHHHH
T ss_pred EEEccccCCCCHHH-HHHHHhhCCCeEEEEeCCCCcccCChHHHHHHHHHHH
Confidence 99999999998663 6666666689999999999999766 45677777665
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-17 Score=166.95 Aligned_cols=163 Identities=18% Similarity=0.189 Sum_probs=132.0
Q ss_pred CCCEEEEECCCC---C--chhhHHHhHhhh-cCCcEEEEeccCCCCCCC-----hhHHHHHHHHHHHHhhccCCCCCEEE
Q 004396 178 GSPTLLFLPGID---G--LGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHASSPEKPIYL 246 (756)
Q Consensus 178 ~~p~lV~lHG~~---~--s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-----~~~~a~dv~~~i~~l~~~~~~~~v~L 246 (756)
+.|+||++||++ + ....|..+.+.| .++|.|+++|+||+|.|+ ....++|+.++++.+....+..++++
T Consensus 36 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l 115 (220)
T 2fuk_A 36 QPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWL 115 (220)
T ss_dssp CSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred ccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCcccCchhHHHHHHHHHHHHhcCCCCcEEE
Confidence 478999999953 2 334578888888 568999999999999984 34688899999988877666678999
Q ss_pred EEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCC
Q 004396 247 VGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLP 326 (756)
Q Consensus 247 vGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (756)
+|||+||.+++.+|.++ .++++|+++|......
T Consensus 116 ~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~--------------------------------------------- 148 (220)
T 2fuk_A 116 AGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD--------------------------------------------- 148 (220)
T ss_dssp EEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC---------------------------------------------
T ss_pred EEECHHHHHHHHHHhhc--cccEEEEecccccchh---------------------------------------------
Confidence 99999999999999987 8999999998653211
Q ss_pred hHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhC
Q 004396 327 PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406 (756)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l 406 (756)
. ..+. ...|+++++|++|.+++.+. .+.+.+.+
T Consensus 149 --------~-------------------------------------~~~~-~~~p~l~i~g~~D~~~~~~~-~~~~~~~~ 181 (220)
T 2fuk_A 149 --------F-------------------------------------SDVQ-PPAQWLVIQGDADEIVDPQA-VYDWLETL 181 (220)
T ss_dssp --------C-------------------------------------TTCC-CCSSEEEEEETTCSSSCHHH-HHHHHTTC
T ss_pred --------h-------------------------------------hhcc-cCCcEEEEECCCCcccCHHH-HHHHHHHh
Confidence 0 0111 15799999999999999995 99999988
Q ss_pred -CCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 407 -QNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 407 -~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+++++++++++||..+.+ ++++.+.+.+
T Consensus 182 ~~~~~~~~~~~~~H~~~~~-~~~~~~~i~~ 210 (220)
T 2fuk_A 182 EQQPTLVRMPDTSHFFHRK-LIDLRGALQH 210 (220)
T ss_dssp SSCCEEEEETTCCTTCTTC-HHHHHHHHHH
T ss_pred CcCCcEEEeCCCCceehhh-HHHHHHHHHH
Confidence 799999999999998885 6677777763
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=173.66 Aligned_cols=199 Identities=12% Similarity=0.051 Sum_probs=134.5
Q ss_pred CCCEEEEECCCC-----CchhhHHHhHhhh-----cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEE
Q 004396 178 GSPTLLFLPGID-----GLGLGLILHHKPL-----GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG~~-----~s~~~~~~~~~~L-----~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~Lv 247 (756)
+.|+|||+||.+ ++...|..+++.| +.+|.|+++|+|+.+.+++....+|+.+.++.+.......+++|+
T Consensus 40 ~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~ 119 (273)
T 1vkh_A 40 TREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNPRNLYDAVSNITRLVKEKGLTNINMV 119 (273)
T ss_dssp CCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCCCcHHHHHHHHHHHHHHhCCcCcEEEE
Confidence 478999999955 4667899999988 689999999999999887766666666666655443344589999
Q ss_pred EeChhhHHHHHHHHhC-----------------CCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhc
Q 004396 248 GDSFGGCLALAVAARN-----------------PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~-----------------P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (756)
||||||.+|+.+|.++ |+.++++|++++.... .......+. ....+...+
T Consensus 120 G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~--------~~~~~~~~~-----~~~~~~~~~ 186 (273)
T 1vkh_A 120 GHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSL--------KELLIEYPE-----YDCFTRLAF 186 (273)
T ss_dssp EETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCH--------HHHHHHCGG-----GHHHHHHHC
T ss_pred EeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccH--------HHhhhhccc-----HHHHHHHHh
Confidence 9999999999999886 7899999999875421 001000000 000000000
Q ss_pred CChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCC
Q 004396 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (756)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D 390 (756)
. ... ..... ....... .....+..+++|+|+++|++|
T Consensus 187 ~-------------~~~----------------------~~~~~-~~~~~~~-------~~~~~~~~~~~P~lii~G~~D 223 (273)
T 1vkh_A 187 P-------------DGI----------------------QMYEE-EPSRVMP-------YVKKALSRFSIDMHLVHSYSD 223 (273)
T ss_dssp T-------------TCG----------------------GGCCC-CHHHHHH-------HHHHHHHHHTCEEEEEEETTC
T ss_pred c-------------ccc----------------------cchhh-cccccCh-------hhhhcccccCCCEEEEecCCc
Confidence 0 000 00000 0000000 001122336899999999999
Q ss_pred CCCCCHHHHHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 391 NMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 391 ~~vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
.++|.+. ++.+.+.++ ++++++++++||..++++ +++.+.|.
T Consensus 224 ~~vp~~~-~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~ 269 (273)
T 1vkh_A 224 ELLTLRQ-TNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIF 269 (273)
T ss_dssp SSCCTHH-HHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHH
T ss_pred CCCChHH-HHHHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHH
Confidence 9999985 888887765 589999999999999999 77777776
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.76 E-value=4.9e-18 Score=170.74 Aligned_cols=165 Identities=18% Similarity=0.194 Sum_probs=129.9
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEe--ccCCCCCC-----------ChhHHHHH---HHHHHHHhhccC--
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCL--HIPVYDRT-----------PFEGLVKF---VEETVRREHASS-- 239 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~--Dl~G~G~S-----------s~~~~a~d---v~~~i~~l~~~~-- 239 (756)
+.|+||++||++++...|..+.+.|+++|.|+++ |++|+|.| +.+++.++ +.++++.+....
T Consensus 37 ~~~~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 116 (226)
T 2h1i_A 37 SKPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYKF 116 (226)
T ss_dssp TSCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEEecCCCChhHHHHHHHHhccCceEEEecCcccCCcchhhccccCccCcChhhHHHHHHHHHHHHHHHHhhcCC
Confidence 5799999999999999999999999779999999 89999976 34444444 444554433333
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHH
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (756)
...+++++||||||.+++.+|.++|++++++|+++|......
T Consensus 117 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------------------------------------- 158 (226)
T 2h1i_A 117 DRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG-------------------------------------- 158 (226)
T ss_dssp CTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS--------------------------------------
T ss_pred CcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc--------------------------------------
Confidence 346899999999999999999999999999999998642210
Q ss_pred hhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHH
Q 004396 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA 399 (756)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~ 399 (756)
......+++|+++++|++|.+++.+. .
T Consensus 159 ----------------------------------------------------~~~~~~~~~p~l~~~G~~D~~~~~~~-~ 185 (226)
T 2h1i_A 159 ----------------------------------------------------MQLANLAGKSVFIAAGTNDPICSSAE-S 185 (226)
T ss_dssp ----------------------------------------------------CCCCCCTTCEEEEEEESSCSSSCHHH-H
T ss_pred ----------------------------------------------------cccccccCCcEEEEeCCCCCcCCHHH-H
Confidence 01112347899999999999999984 8
Q ss_pred HHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 400 KRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 400 ~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
+.+.+.++ +.++ +++++||..+.+.++.+.+.|.
T Consensus 186 ~~~~~~l~~~~~~~~~-~~~~~gH~~~~~~~~~~~~~l~ 223 (226)
T 2h1i_A 186 EELKVLLENANANVTM-HWENRGHQLTMGEVEKAKEWYD 223 (226)
T ss_dssp HHHHHHHHTTTCEEEE-EEESSTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEE-EeCCCCCCCCHHHHHHHHHHHH
Confidence 88888776 3455 9999999998887777777665
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-17 Score=168.67 Aligned_cols=168 Identities=16% Similarity=0.166 Sum_probs=135.3
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhc---CCcEEEEeccC-------------------CCCCC------ChhHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLG---KAFEVRCLHIP-------------------VYDRT------PFEGLVKFVE 229 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~---~gy~Vi~~Dl~-------------------G~G~S------s~~~~a~dv~ 229 (756)
..|+|||+||++++...|..+++.|+ ++|.|+++|+| |+|.+ +++++++++.
T Consensus 23 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~~~~~ 102 (226)
T 3cn9_A 23 ADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASADQVI 102 (226)
T ss_dssp CCEEEEEECCTTCCGGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCChHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhHHHHHHHHH
Confidence 57899999999999999999999996 89999997665 77755 3778888898
Q ss_pred HHHHHhhc-cCCCCCEEEEEeChhhHHHHHHHH-hCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhh
Q 004396 230 ETVRREHA-SSPEKPIYLVGDSFGGCLALAVAA-RNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS 307 (756)
Q Consensus 230 ~~i~~l~~-~~~~~~v~LvGhS~GG~vAl~~A~-~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (756)
.+++.+.. ....++++|+||||||.+|+.+|. ++|++++++|+++|.......
T Consensus 103 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~------------------------- 157 (226)
T 3cn9_A 103 ALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD------------------------- 157 (226)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG-------------------------
T ss_pred HHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh-------------------------
Confidence 98888732 122358999999999999999999 999999999999984421000
Q ss_pred hhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEe
Q 004396 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLAS 387 (756)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G 387 (756)
+ + -....+++|+++++|
T Consensus 158 --------------------------~-~------------------------------------~~~~~~~~P~lii~G 174 (226)
T 3cn9_A 158 --------------------------L-A------------------------------------LDERHKRIPVLHLHG 174 (226)
T ss_dssp --------------------------C-C------------------------------------CCTGGGGCCEEEEEE
T ss_pred --------------------------h-h------------------------------------hcccccCCCEEEEec
Confidence 0 0 000345789999999
Q ss_pred CCCCCCCCHHHHHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 388 GKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 388 ~~D~~vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++|.+++.+. ++.+.+.++ ++++++++ +||..+.+.++.+.+.|.+
T Consensus 175 ~~D~~~~~~~-~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~~ 224 (226)
T 3cn9_A 175 SQDDVVDPAL-GRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRK 224 (226)
T ss_dssp TTCSSSCHHH-HHHHHHHHHHTTCCEEEEEES-CCSSCCHHHHHHHHHHHHH
T ss_pred CCCCccCHHH-HHHHHHHHHHcCCceeEEEec-CCCCcchhhHHHHHHHHHh
Confidence 9999999985 888888876 58999999 9999999988887776653
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=7.9e-18 Score=167.81 Aligned_cols=169 Identities=14% Similarity=0.143 Sum_probs=135.2
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhc---CCcEEEEeccC-------------------CCCCC------ChhHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLG---KAFEVRCLHIP-------------------VYDRT------PFEGLVKFVE 229 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~---~gy~Vi~~Dl~-------------------G~G~S------s~~~~a~dv~ 229 (756)
+.|+|||+||++++...|..+.+.|. ++|.|+++|+| |+|.+ ++++.++++.
T Consensus 13 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~~~~~ 92 (218)
T 1auo_A 13 ADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVT 92 (218)
T ss_dssp CSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCChhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHHHHHHHHH
Confidence 47899999999999999999999995 79999997655 56654 3777888899
Q ss_pred HHHHHhhcc-CCCCCEEEEEeChhhHHHHHHHH-hCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhh
Q 004396 230 ETVRREHAS-SPEKPIYLVGDSFGGCLALAVAA-RNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS 307 (756)
Q Consensus 230 ~~i~~l~~~-~~~~~v~LvGhS~GG~vAl~~A~-~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (756)
.+++.+... ...++++++||||||.+|+.+|. ++|++++++|+++|.... . .++
T Consensus 93 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~--~----------~~~------------ 148 (218)
T 1auo_A 93 DLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT--F----------GDE------------ 148 (218)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT--C----------CTT------------
T ss_pred HHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC--c----------hhh------------
Confidence 888887431 12358999999999999999999 999999999999985532 0 000
Q ss_pred hhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEe
Q 004396 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLAS 387 (756)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G 387 (756)
. .. ....+++|+|+++|
T Consensus 149 ----~-----------~~------------------------------------------------~~~~~~~P~l~i~G 165 (218)
T 1auo_A 149 ----L-----------EL------------------------------------------------SASQQRIPALCLHG 165 (218)
T ss_dssp ----C-----------CC------------------------------------------------CHHHHTCCEEEEEE
T ss_pred ----h-----------hh------------------------------------------------hhcccCCCEEEEEe
Confidence 0 00 00234689999999
Q ss_pred CCCCCCCCHHHHHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 388 GKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 388 ~~D~~vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++|.+++.+. ++.+.+.++ ++++++++ +||..+.+.++.+.+.|.+
T Consensus 166 ~~D~~~~~~~-~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~ 215 (218)
T 1auo_A 166 QYDDVVQNAM-GRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAA 215 (218)
T ss_dssp TTCSSSCHHH-HHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHH
T ss_pred CCCceecHHH-HHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHH
Confidence 9999999985 888888886 48999999 9999999988888887764
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-17 Score=175.92 Aligned_cols=166 Identities=13% Similarity=0.131 Sum_probs=132.3
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhcc--------CCCCCEEEEE
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS--------SPEKPIYLVG 248 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~--------~~~~~v~LvG 248 (756)
+.|+||++||++++...|..+.+.| .+||.|+++|+||+|.|... ..+|+.+.++.+... ....+++++|
T Consensus 95 ~~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~~-~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G 173 (306)
T 3vis_A 95 TYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQPDS-RARQLNAALDYMLTDASSAVRNRIDASRLAVMG 173 (306)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECCSSTTCCHHH-HHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEE
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCcch-HHHHHHHHHHHHHhhcchhhhccCCcccEEEEE
Confidence 4789999999999999999999999 56899999999999998432 223444444443322 1235899999
Q ss_pred eChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChH
Q 004396 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (756)
|||||.+++.+|.++|+ +.++|+++|...
T Consensus 174 ~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~-------------------------------------------------- 202 (306)
T 3vis_A 174 HSMGGGGTLRLASQRPD-LKAAIPLTPWHL-------------------------------------------------- 202 (306)
T ss_dssp ETHHHHHHHHHHHHCTT-CSEEEEESCCCS--------------------------------------------------
T ss_pred EChhHHHHHHHHhhCCC-eeEEEEeccccC--------------------------------------------------
Confidence 99999999999999988 899999887331
Q ss_pred HHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCC
Q 004396 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN 408 (756)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~ 408 (756)
...+.++++|+|+++|++|.+++.+...+.+.+.+++
T Consensus 203 -------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~ 239 (306)
T 3vis_A 203 -------------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPS 239 (306)
T ss_dssp -------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCT
T ss_pred -------------------------------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhcc
Confidence 0234567899999999999999987227888888874
Q ss_pred ---eEEEEEcCCCCcccccchhhHHHHhhhccccc
Q 004396 409 ---CIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (756)
Q Consensus 409 ---~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~r 440 (756)
.++++++++||..+.+.++++.+.+. .|++
T Consensus 240 ~~~~~~~~~~g~gH~~~~~~~~~~~~~i~--~fl~ 272 (306)
T 3vis_A 240 PTDKAYLELDGASHFAPNITNKTIGMYSV--AWLK 272 (306)
T ss_dssp TSCEEEEEETTCCTTGGGSCCHHHHHHHH--HHHH
T ss_pred CCCceEEEECCCCccchhhchhHHHHHHH--HHHH
Confidence 67999999999999999988888877 4444
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.5e-17 Score=181.95 Aligned_cols=222 Identities=12% Similarity=0.101 Sum_probs=140.0
Q ss_pred CCCEEEEECCCCCchhhHHHhH--hhhcCCcEEEEeccCCCCCCC------hhHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 004396 178 GSPTLLFLPGIDGLGLGLILHH--KPLGKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASSPEKPIYLVGD 249 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~--~~L~~gy~Vi~~Dl~G~G~Ss------~~~~a~dv~~~i~~l~~~~~~~~v~LvGh 249 (756)
..|+|||+||++++...|.... ..+.++|.|+++|+||||.|. ..++.+|+.++++.+.... .+++|+||
T Consensus 158 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~~~~l~~~~--~~v~l~G~ 235 (405)
T 3fnb_A 158 AQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFEVDARAAISAILDWYQAPT--EKIAIAGF 235 (405)
T ss_dssp CCCEEEEECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCCCCSCTHHHHHHHHHHCCCSS--SCEEEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCCCCccHHHHHHHHHHHHHhcC--CCEEEEEE
Confidence 3599999999999999987665 445899999999999999983 2356888899999877643 58999999
Q ss_pred ChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHH
Q 004396 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (756)
Q Consensus 250 S~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (756)
||||.+++.+|..+| +++++|+++|....... ....+..... .+..+..... ........
T Consensus 236 S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~-------~~~~~~~~~~--~p~~~~~~~~--------~~~~~~~~-- 295 (405)
T 3fnb_A 236 SGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEV-------FRISFSTALK--APKTILKWGS--------KLVTSVNK-- 295 (405)
T ss_dssp TTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHH-------HHHHCC----------------------------CCCH--
T ss_pred ChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHH-------HHHhhhhhhh--CcHHHHHHHH--------HHhhccch--
Confidence 999999999999998 89999999986632110 0001110000 0000000000 00000000
Q ss_pred HHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC--
Q 004396 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-- 407 (756)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~-- 407 (756)
........... .............+.... ....+.++++|+|+|+|++|.+++.+. ++.+.+.++
T Consensus 296 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~--~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~l~~~l~~~ 362 (405)
T 3fnb_A 296 VAEVNLNKYAW----------QFGQVDFITSVNEVLEQA--QIVDYNKIDVPSLFLVGAGEDSELMRQ-SQVLYDNFKQR 362 (405)
T ss_dssp HHHHHHHHHHH----------HHTSSSHHHHHHHHHHHC--CCCCGGGCCSCEEEEEETTSCHHHHHH-HHHHHHHHHHT
T ss_pred hHHHHHHHhhh----------hcCCCCHHHHHHHHHHhh--cccCHhhCCCCEEEEecCCCcCCChHH-HHHHHHHhccC
Confidence 00000000000 000011111111111000 012268899999999999999999885 888888774
Q ss_pred --CeEEEEE---cCCCCcccccchhhHHHHhh
Q 004396 408 --NCIVRNF---KDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 408 --~~~l~~i---~~aGH~~~~e~p~~~~~~I~ 434 (756)
+++++++ +++||..+.++++.+.+.|.
T Consensus 363 ~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~ 394 (405)
T 3fnb_A 363 GIDVTLRKFSSESGADAHCQVNNFRLMHYQVF 394 (405)
T ss_dssp TCCEEEEEECTTTTCCSGGGGGGHHHHHHHHH
T ss_pred CCCceEEEEcCCccchhccccchHHHHHHHHH
Confidence 5689999 66778899999999988887
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-17 Score=176.76 Aligned_cols=159 Identities=14% Similarity=0.166 Sum_probs=128.5
Q ss_pred CCEEEEECCCCCchhhHH-------HhHhhh-cCCcEEEEeccCCCCCCC------------------------------
Q 004396 179 SPTLLFLPGIDGLGLGLI-------LHHKPL-GKAFEVRCLHIPVYDRTP------------------------------ 220 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~-------~~~~~L-~~gy~Vi~~Dl~G~G~Ss------------------------------ 220 (756)
+++|||+||++.+...|. .+++.| .++|.|+++|+||||+|+
T Consensus 62 ~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (328)
T 1qlw_A 62 RYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEAA 141 (328)
T ss_dssp SSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBCCCHHHH
T ss_pred CccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCcccccceeccchhhh
Confidence 578999999999999998 477877 678999999999999984
Q ss_pred -----------------------hhH------------------HHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHH
Q 004396 221 -----------------------FEG------------------LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAV 259 (756)
Q Consensus 221 -----------------------~~~------------------~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~ 259 (756)
+++ +++++..+++.+. +++|+||||||.+++.+
T Consensus 142 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~------~~~lvGhS~GG~~a~~~ 215 (328)
T 1qlw_A 142 WAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD------GTVLLSHSQSGIYPFQT 215 (328)
T ss_dssp HHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT------SEEEEEEGGGTTHHHHH
T ss_pred hhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC------CceEEEECcccHHHHHH
Confidence 222 5566666666541 79999999999999999
Q ss_pred HHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhh
Q 004396 260 AARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLP 339 (756)
Q Consensus 260 A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (756)
|.++|++++++|+++|... . ..
T Consensus 216 a~~~p~~v~~~v~~~p~~~---------------~-----------------~~-------------------------- 237 (328)
T 1qlw_A 216 AAMNPKGITAIVSVEPGEC---------------P-----------------KP-------------------------- 237 (328)
T ss_dssp HHHCCTTEEEEEEESCSCC---------------C-----------------CG--------------------------
T ss_pred HHhChhheeEEEEeCCCCC---------------C-----------------CH--------------------------
Confidence 9999999999999997430 0 00
Q ss_pred hhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCC-----HHHHHHHHHhCC----CeE
Q 004396 340 ALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPS-----EDEAKRLNNSLQ----NCI 410 (756)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~-----~~~~~~l~~~l~----~~~ 410 (756)
......+++|+|+++|++|.+++. +. ++.+.+.++ +++
T Consensus 238 --------------------------------~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~-~~~~~~~l~~~g~~~~ 284 (328)
T 1qlw_A 238 --------------------------------EDVKPLTSIPVLVVFGDHIEEFPRWAPRLKA-CHAFIDALNAAGGKGQ 284 (328)
T ss_dssp --------------------------------GGCGGGTTSCEEEEECSSCTTCTTTHHHHHH-HHHHHHHHHHTTCCEE
T ss_pred --------------------------------HHHhhccCCCEEEEeccCCccccchhhHHHH-HHHHHHHHHHhCCCce
Confidence 011123568999999999999997 74 888888776 899
Q ss_pred EEEEcCCC-----Ccccccc-hhhHHHHhh
Q 004396 411 VRNFKDNG-----HTLLLEE-GISLLTIIK 434 (756)
Q Consensus 411 l~~i~~aG-----H~~~~e~-p~~~~~~I~ 434 (756)
+++++++| |+++.|. ++++++.|.
T Consensus 285 ~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~ 314 (328)
T 1qlw_A 285 LMSLPALGVHGNSHMMMQDRNNLQVADLIL 314 (328)
T ss_dssp EEEGGGGTCCCCCTTGGGSTTHHHHHHHHH
T ss_pred EEEcCCCCcCCCcccchhccCHHHHHHHHH
Confidence 99999666 9999998 899998887
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.8e-18 Score=166.32 Aligned_cols=180 Identities=15% Similarity=0.127 Sum_probs=115.4
Q ss_pred CCEEEEECCCCCchhhHHH--hHhhh---cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhh
Q 004396 179 SPTLLFLPGIDGLGLGLIL--HHKPL---GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~--~~~~L---~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG 253 (756)
.|+|||+||++++...+.. +.+.+ ..+|+|+++|+||||. +..+++..+++.... ++++|+||||||
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~----~~~~~l~~~~~~~~~----~~i~l~G~SmGG 73 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPA----EAAEMLESIVMDKAG----QSIGIVGSSLGG 73 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHH----HHHHHHHHHHHHHTT----SCEEEEEETHHH
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHH----HHHHHHHHHHHhcCC----CcEEEEEEChhh
Confidence 3799999999988776532 33333 4569999999999994 566677777776544 489999999999
Q ss_pred HHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHH
Q 004396 254 CLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQ 333 (756)
Q Consensus 254 ~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (756)
.+|+.+|.++|+.+..++...+... ..... ...........+. .....
T Consensus 74 ~~a~~~a~~~~~~~~~~~~~~~~~~--------------~~~~~----~~~~~~~~~~~~~--------------~~~~~ 121 (202)
T 4fle_A 74 YFATWLSQRFSIPAVVVNPAVRPFE--------------LLSDY----LGENQNPYTGQKY--------------VLESR 121 (202)
T ss_dssp HHHHHHHHHTTCCEEEESCCSSHHH--------------HGGGG----CEEEECTTTCCEE--------------EECHH
T ss_pred HHHHHHHHHhcccchheeeccchHH--------------HHHHh----hhhhccccccccc--------------cchHH
Confidence 9999999999988766655433110 00000 0000000000000 00000
Q ss_pred HHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE
Q 004396 334 LSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRN 413 (756)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~ 413 (756)
.. ...........++++|+|+|+|++|.++|.+. ++++ .+++++.+
T Consensus 122 ~~------------------------------~~~~~~~~~~~~~~~P~LiihG~~D~~Vp~~~-s~~l---~~~~~l~i 167 (202)
T 4fle_A 122 HI------------------------------YDLKAMQIEKLESPDLLWLLQQTGDEVLDYRQ-AVAY---YTPCRQTV 167 (202)
T ss_dssp HH------------------------------HHHHTTCCSSCSCGGGEEEEEETTCSSSCHHH-HHHH---TTTSEEEE
T ss_pred HH------------------------------HHHHhhhhhhhccCceEEEEEeCCCCCCCHHH-HHHH---hhCCEEEE
Confidence 00 00001124557789999999999999999985 7665 46899999
Q ss_pred EcCCCCcccccchhhHHHHhh
Q 004396 414 FKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 414 i~~aGH~~~~e~p~~~~~~I~ 434 (756)
++|+||.+ +.++++.+.|.
T Consensus 168 ~~g~~H~~--~~~~~~~~~I~ 186 (202)
T 4fle_A 168 ESGGNHAF--VGFDHYFSPIV 186 (202)
T ss_dssp ESSCCTTC--TTGGGGHHHHH
T ss_pred ECCCCcCC--CCHHHHHHHHH
Confidence 99999964 45555555555
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.9e-17 Score=172.37 Aligned_cols=204 Identities=16% Similarity=0.108 Sum_probs=134.6
Q ss_pred CCEEEEECCC--CCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----ChhHHHHHHHHHHHHhhccCCCCCEEEEEeCh
Q 004396 179 SPTLLFLPGI--DGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSF 251 (756)
Q Consensus 179 ~p~lV~lHG~--~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~ 251 (756)
+|+|||+||+ +++...|..+++.|+.+|+|+++|+||||.+ +++++++++.+.++.+.. .++++|+||||
T Consensus 81 ~~~lv~lhG~~~~~~~~~~~~~~~~L~~~~~v~~~d~~G~G~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~lvGhS~ 157 (319)
T 3lcr_A 81 GPQLILVCPTVMTTGPQVYSRLAEELDAGRRVSALVPPGFHGGQALPATLTVLVRSLADVVQAEVA---DGEFALAGHSS 157 (319)
T ss_dssp SCEEEEECCSSTTCSGGGGHHHHHHHCTTSEEEEEECTTSSTTCCEESSHHHHHHHHHHHHHHHHT---TSCEEEEEETH
T ss_pred CCeEEEECCCCcCCCHHHHHHHHHHhCCCceEEEeeCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC---CCCEEEEEECH
Confidence 7899999995 7788999999999999999999999999987 588889998888887543 24899999999
Q ss_pred hhHHHHHHHHhC---CCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChH
Q 004396 252 GGCLALAVAARN---PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (756)
Q Consensus 252 GG~vAl~~A~~~---P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (756)
||.+|+.+|.++ |+.+.++|++++....... .....+...+. ...+... ... .....
T Consensus 158 Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~-------~~~~~~~---------~~~-~~~~~- 217 (319)
T 3lcr_A 158 GGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG--GRPEELFRSAL-------NERFVEY---------LRL-TGGGN- 217 (319)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC--CHHHHHHHHHH-------HHHHHHH---------HHH-HCCCC-
T ss_pred HHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc--hhhHHHHHHHH-------HHHHhhh---------hcc-cCCCc-
Confidence 999999999988 8899999999986532111 00000100000 0000000 000 00000
Q ss_pred HHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC-
Q 004396 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ- 407 (756)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~- 407 (756)
. ...+......+... .......+++|+|+|+|++|. +++.. .+.+.+.++
T Consensus 218 --~----------------------~~~l~~~~~~~~~~---~~~~~~~i~~PvLli~g~~~~-~~~~~-~~~~~~~~~~ 268 (319)
T 3lcr_A 218 --L----------------------SQRITAQVWCLELL---RGWRPEGLTAPTLYVRPAQPL-VEQEK-PEWRGDVLAA 268 (319)
T ss_dssp --H----------------------HHHHHHHHHHHHHT---TTCCCCCCSSCEEEEEESSCS-SSCCC-THHHHHHHHT
T ss_pred --h----------------------hHHHHHHHHHHHHH---hcCCCCCcCCCEEEEEeCCCC-CCccc-chhhhhcCCC
Confidence 0 00000000000000 011236789999999999854 44442 666666665
Q ss_pred CeEEEEEcCCCCccccc--chhhHHHHhhh
Q 004396 408 NCIVRNFKDNGHTLLLE--EGISLLTIIKG 435 (756)
Q Consensus 408 ~~~l~~i~~aGH~~~~e--~p~~~~~~I~~ 435 (756)
..+++.+++ ||+.+++ +++++++.|.+
T Consensus 269 ~~~~~~~~g-~H~~~~~~~~~~~va~~i~~ 297 (319)
T 3lcr_A 269 MGQVVEAPG-DHFTIIEGEHVASTAHIVGD 297 (319)
T ss_dssp CSEEEEESS-CTTGGGSTTTHHHHHHHHHH
T ss_pred CceEEEeCC-CcHHhhCcccHHHHHHHHHH
Confidence 478888875 8888886 99999999983
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.73 E-value=5.7e-17 Score=177.75 Aligned_cols=216 Identities=16% Similarity=0.098 Sum_probs=141.7
Q ss_pred CCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHHHHHH
Q 004396 160 DGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEE 230 (756)
Q Consensus 160 dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~ 230 (756)
||..+..+.+.+.|. .+.|+||++||++++...|......| ++||.|+++|+||+|.| ++++.+.++.+
T Consensus 135 dg~~i~~~l~~p~~~--~~~P~vl~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~~~~~~~~~~~~~~~~ 212 (386)
T 2jbw_A 135 DGIPMPVYVRIPEGP--GPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVD 212 (386)
T ss_dssp TTEEEEEEEECCSSS--CCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSCHHHHHHHHHH
T ss_pred CCEEEEEEEEcCCCC--CCCCEEEEeCCCCccHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence 565544444444443 24789999999999888666667666 78999999999999987 35555666666
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhc
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (756)
++..... ...++++|+|||+||.+++.+|.. |++++++|++ |........ ..++......... ..
T Consensus 213 ~l~~~~~-~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~--------~~~~~~~~~~~~~----~~ 277 (386)
T 2jbw_A 213 LLTKLEA-IRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYW--------DLETPLTKESWKY----VS 277 (386)
T ss_dssp HHHHCTT-EEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTG--------GGSCHHHHHHHHH----HT
T ss_pred HHHhCCC-cCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHH--------HhccHHHHHHHHH----Hh
Confidence 6665211 112489999999999999999999 8999999999 755332111 0111111000000 00
Q ss_pred CChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCC
Q 004396 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (756)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D 390 (756)
+.. .+. ... ...+... .....+.++++|+|+++|++|
T Consensus 278 g~~------------~~~----~~~-------------------------~~~~~~~--~~~~~~~~i~~P~Lii~G~~D 314 (386)
T 2jbw_A 278 KVD------------TLE----EAR-------------------------LHVHAAL--ETRDVLSQIACPTYILHGVHD 314 (386)
T ss_dssp TCS------------SHH----HHH-------------------------HHHHHHT--CCTTTGGGCCSCEEEEEETTS
T ss_pred CCC------------CHH----HHH-------------------------HHHHHhC--ChhhhhcccCCCEEEEECCCC
Confidence 000 000 000 0000000 012456788999999999999
Q ss_pred CCCCCHHHHHHHHHhC-C-CeEEEEEcCCCCcccccchhhHHHHhhhccccc
Q 004396 391 NMLPSEDEAKRLNNSL-Q-NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (756)
Q Consensus 391 ~~vp~~~~~~~l~~~l-~-~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~r 440 (756)
. ++.+. ++.+.+.+ + ++++++++++||.. .++++++.+.|. .|+.
T Consensus 315 ~-v~~~~-~~~l~~~l~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~--~fl~ 361 (386)
T 2jbw_A 315 E-VPLSF-VDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMA--DWLY 361 (386)
T ss_dssp S-SCTHH-HHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHH--HHHH
T ss_pred C-CCHHH-HHHHHHHhcCCCcEEEEeCCCCcCC-ccchHHHHHHHH--HHHH
Confidence 9 89985 99999999 7 89999999999965 677777777776 4444
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=7.9e-17 Score=163.14 Aligned_cols=163 Identities=13% Similarity=0.137 Sum_probs=125.4
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCC------------------hhHHHHHHHHHHHHhhcc
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP------------------FEGLVKFVEETVRREHAS 238 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss------------------~~~~a~dv~~~i~~l~~~ 238 (756)
..|+||++||++++...|..+++.| .+||.|+++|++|+|.++ .++.++|+.++++.+...
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 110 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARH 110 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhc
Confidence 3689999999999999999999999 689999999999997662 246688999999887654
Q ss_pred CC-CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHH
Q 004396 239 SP-EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMA 317 (756)
Q Consensus 239 ~~-~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (756)
.. ..+++++||||||.+++.+|.++|+ +.++|++.+..........
T Consensus 111 ~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~~~~~-------------------------------- 157 (241)
T 3f67_A 111 GGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEKSLNS-------------------------------- 157 (241)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCCCSSS--------------------------------
T ss_pred cCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCCccCC--------------------------------
Confidence 21 3589999999999999999999987 6666665543211000000
Q ss_pred HHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHH
Q 004396 318 MVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSED 397 (756)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~ 397 (756)
.. .. ...+.++++|+|+++|++|.+++.+.
T Consensus 158 ------~~------------------------------~~--------------~~~~~~~~~P~l~~~g~~D~~~~~~~ 187 (241)
T 3f67_A 158 ------PK------------------------------HP--------------VDIAVDLNAPVLGLYGAKDASIPQDT 187 (241)
T ss_dssp ------CC------------------------------CH--------------HHHGGGCCSCEEEEEETTCTTSCHHH
T ss_pred ------cc------------------------------CH--------------HHhhhhcCCCEEEEEecCCCCCCHHH
Confidence 00 00 03346678999999999999999984
Q ss_pred HHHHHHHhC----CCeEEEEEcCCCCccccc
Q 004396 398 EAKRLNNSL----QNCIVRNFKDNGHTLLLE 424 (756)
Q Consensus 398 ~~~~l~~~l----~~~~l~~i~~aGH~~~~e 424 (756)
.+.+.+.+ +++++++++++||.+..+
T Consensus 188 -~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 217 (241)
T 3f67_A 188 -VETMRQALRAANATAEIVVYPEADHAFNAD 217 (241)
T ss_dssp -HHHHHHHHHHTTCSEEEEEETTCCTTTTCT
T ss_pred -HHHHHHHHHHcCCCcEEEEECCCCcceecC
Confidence 88887776 689999999999988754
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-16 Score=168.14 Aligned_cols=202 Identities=15% Similarity=0.118 Sum_probs=130.8
Q ss_pred CCCEEEEECCCCCc-hhhHHHhHhhhcCCcEEEEeccCCCCCCC-------------------------hhHHHHHHHHH
Q 004396 178 GSPTLLFLPGIDGL-GLGLILHHKPLGKAFEVRCLHIPVYDRTP-------------------------FEGLVKFVEET 231 (756)
Q Consensus 178 ~~p~lV~lHG~~~s-~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss-------------------------~~~~a~dv~~~ 231 (756)
..|+||++||++++ ...|.........+|.|+++|+||+|.|+ +...++|+.++
T Consensus 81 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 160 (318)
T 1l7a_A 81 PHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRA 160 (318)
T ss_dssp CEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHH
T ss_pred CccEEEEEcCCCCCCCCCcccccchhhCCcEEEEecCCCCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHH
Confidence 46899999999999 88887766444789999999999999884 24678888888
Q ss_pred HHHhhccCC--CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhh
Q 004396 232 VRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYV 309 (756)
Q Consensus 232 i~~l~~~~~--~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (756)
++.+..... ..+++++|||+||.+|+.+|..+|+ +.++|+++|.... .........
T Consensus 161 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~-------~~~~~~~~~-------------- 218 (318)
T 1l7a_A 161 LEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSN-------FERAIDVAL-------------- 218 (318)
T ss_dssp HHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCC-------HHHHHHHCC--------------
T ss_pred HHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccC-------HHHHHhcCC--------------
Confidence 888765421 2589999999999999999999876 7788888775421 000000000
Q ss_pred cCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCC
Q 004396 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGK 389 (756)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~ 389 (756)
..+. .....+..... ...........+.. .+....+.++++|+|+++|++
T Consensus 219 -~~~~--------------~~~~~~~~~~~-------------~~~~~~~~~~~~~~--~~~~~~~~~~~~P~li~~g~~ 268 (318)
T 1l7a_A 219 -EQPY--------------LEINSFFRRNG-------------SPETEVQAMKTLSY--FDIMNLADRVKVPVLMSIGLI 268 (318)
T ss_dssp -STTT--------------THHHHHHHHSC-------------CHHHHHHHHHHHHT--TCHHHHGGGCCSCEEEEEETT
T ss_pred -cCcc--------------HHHHHHHhccC-------------CcccHHHHHHhhcc--ccHHHHHhhCCCCEEEEeccC
Confidence 0000 00000000000 00000000000000 001244577899999999999
Q ss_pred CCCCCCHHHHHHHHHhCCC-eEEEEEcCCCCcccccchhhHHHH
Q 004396 390 DNMLPSEDEAKRLNNSLQN-CIVRNFKDNGHTLLLEEGISLLTI 432 (756)
Q Consensus 390 D~~vp~~~~~~~l~~~l~~-~~l~~i~~aGH~~~~e~p~~~~~~ 432 (756)
|.+++.+. .+.+.+.+++ +++++++++||....+..+.+.+.
T Consensus 269 D~~~~~~~-~~~~~~~l~~~~~~~~~~~~~H~~~~~~~~~~~~f 311 (318)
T 1l7a_A 269 DKVTPPST-VFAAYNHLETKKELKVYRYFGHEYIPAFQTEKLAF 311 (318)
T ss_dssp CSSSCHHH-HHHHHHHCCSSEEEEEETTCCSSCCHHHHHHHHHH
T ss_pred CCCCCccc-HHHHHhhcCCCeeEEEccCCCCCCcchhHHHHHHH
Confidence 99999985 8999998874 899999999999544333333333
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.73 E-value=2e-17 Score=172.71 Aligned_cols=179 Identities=15% Similarity=0.109 Sum_probs=128.6
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhh-cCCcEEEEeccCCCCCC--ChhHHHHHHHHHHHHhhcc-----CCCCCEEE
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--PFEGLVKFVEETVRREHAS-----SPEKPIYL 246 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--s~~~~a~dv~~~i~~l~~~-----~~~~~v~L 246 (756)
..|+||++||.+ ++...|..+++.| ..+|.|+++|+||+|.+ +.....+|+.++++.+... ....+++|
T Consensus 49 ~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l 128 (283)
T 3bjr_A 49 NLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQPLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITP 128 (283)
T ss_dssp CEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCSSCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEE
T ss_pred CCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccccCchhHHHHHHHHHHHHHHHHHHhCCCcccEEE
Confidence 578999999943 5667788899999 56899999999999998 7777777777777665432 11248999
Q ss_pred EEeChhhHHHHHHHHhCCCc-------------ceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCCh
Q 004396 247 VGDSFGGCLALAVAARNPTI-------------DLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDP 313 (756)
Q Consensus 247 vGhS~GG~vAl~~A~~~P~~-------------v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (756)
+||||||.+|+.+|.++|+. ++++|+++|....... +... . ..+....
T Consensus 129 ~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~-~~~~----------~-----~~~~~~~--- 189 (283)
T 3bjr_A 129 AGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLG-FPKD----------D-----ATLATWT--- 189 (283)
T ss_dssp EEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSB-C-----------------------CCC---
T ss_pred EEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccc-cccc----------c-----chHHHHH---
Confidence 99999999999999999987 8999999886542111 0000 0 0000000
Q ss_pred hHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCC
Q 004396 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNML 393 (756)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~v 393 (756)
..... . .....+.++.+|+|+++|++|.++
T Consensus 190 ----------------------~~~~~-----------~-----------------~~~~~~~~~~~P~lii~G~~D~~~ 219 (283)
T 3bjr_A 190 ----------------------PTPNE-----------L-----------------AADQHVNSDNQPTFIWTTADDPIV 219 (283)
T ss_dssp ----------------------CCGGG-----------G-----------------CGGGSCCTTCCCEEEEEESCCTTS
T ss_pred ----------------------HHhHh-----------c-----------------CHHHhccCCCCCEEEEEcCCCCCC
Confidence 00000 0 001345678899999999999999
Q ss_pred CCHHHHHHHHHhCC----CeEEEEEcCCCCcccccch
Q 004396 394 PSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEG 426 (756)
Q Consensus 394 p~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p 426 (756)
|.+. ++.+.+.++ ++++++++++||.+..+.+
T Consensus 220 p~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 255 (283)
T 3bjr_A 220 PATN-TLAYATALATAKIPYELHVFKHGPHGLALANA 255 (283)
T ss_dssp CTHH-HHHHHHHHHHTTCCEEEEEECCCSHHHHHHHH
T ss_pred ChHH-HHHHHHHHHHCCCCeEEEEeCCCCcccccccc
Confidence 9985 888887765 4699999999998887765
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.72 E-value=3e-17 Score=173.49 Aligned_cols=202 Identities=16% Similarity=0.182 Sum_probs=134.4
Q ss_pred CCCEEEEECCCCCch--hhHHHhHhhhcCCcEEEEeccCCCCCC-----ChhHHHHHHHHH-HHHhhccCCCCCEEEEEe
Q 004396 178 GSPTLLFLPGIDGLG--LGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEET-VRREHASSPEKPIYLVGD 249 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~--~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~-i~~l~~~~~~~~v~LvGh 249 (756)
++|+|||+||++++. ..|..+...|..+|+|+++|+||||.| +++++++++.+. ++.+ +..+++|+||
T Consensus 66 ~~~~lvllhG~~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~a~~~~~~l~~~~----~~~~~~LvGh 141 (300)
T 1kez_A 66 GEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIRTQ----GDKPFVVAGH 141 (300)
T ss_dssp CSSEEEECCCSSTTCSTTTTHHHHHHTSSSCCBCCCCCTTSSTTCCBCSSHHHHHHHHHHHHHHHC----SSCCEEEECC
T ss_pred CCCeEEEECCCcccCcHHHHHHHHHhcCCCceEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----CCCCEEEEEE
Confidence 478999999999987 899999999988899999999999988 588888888754 4443 2348999999
Q ss_pred ChhhHHHHHHHHhCC---CcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCC
Q 004396 250 SFGGCLALAVAARNP---TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLP 326 (756)
Q Consensus 250 S~GG~vAl~~A~~~P---~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (756)
||||.+|+.+|.++| +.++++|++++...... .....+ .......+..+.. ..
T Consensus 142 S~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~-------~~~~~~-------~~~~~~~~~~~~~--------~~-- 197 (300)
T 1kez_A 142 SAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQ-------DAMNAW-------LEELTATLFDRET--------VR-- 197 (300)
T ss_dssp THHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTC-------HHHHHH-------HHHHHGGGCCCCS--------SC--
T ss_pred CHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcch-------hHHHHH-------HHHHHHHHHhCcC--------Cc--
Confidence 999999999999988 58999999998653211 000000 0010011111100 00
Q ss_pred hHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhC
Q 004396 327 PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406 (756)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l 406 (756)
.....+.. +..+.... ....+..+++|+|+|+|+ |..+++.. ..+.+.+
T Consensus 198 -------------------------~~~~~~~~-~~~~~~~~--~~~~~~~i~~P~lii~G~-d~~~~~~~--~~~~~~~ 246 (300)
T 1kez_A 198 -------------------------MDDTRLTA-LGAYDRLT--GQWRPRETGLPTLLVSAG-EPMGPWPD--DSWKPTW 246 (300)
T ss_dssp -------------------------CCHHHHHH-HHHHHHHT--TTCCCCCCSCCBEEEEES-SCSSCCCS--SCCSCCC
T ss_pred -------------------------cchHHHHH-HHHHHHHH--hcCCCCCCCCCEEEEEeC-CCCCCCcc--cchhhhc
Confidence 00000000 00000000 012347889999999995 55665542 3344555
Q ss_pred C-CeEEEEEcCCCCcccc-cchhhHHHHhhhcccccc
Q 004396 407 Q-NCIVRNFKDNGHTLLL-EEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 407 ~-~~~l~~i~~aGH~~~~-e~p~~~~~~I~~~~f~rr 441 (756)
+ +++++++++ ||+.++ |+|+.+++.|. .|+.+
T Consensus 247 ~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~--~fl~~ 280 (300)
T 1kez_A 247 PFEHDTVAVPG-DHFTMVQEHADAIARHID--AWLGG 280 (300)
T ss_dssp SSCCEEEEESS-CTTTSSSSCSHHHHHHHH--HHHTC
T ss_pred CCCCeEEEecC-CChhhccccHHHHHHHHH--HHHHh
Confidence 5 579999998 999997 99999999998 45544
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=6.6e-17 Score=160.93 Aligned_cols=165 Identities=15% Similarity=0.133 Sum_probs=127.1
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEec-------------cCCCCCC--------ChhHHHHHHHHHHHHhh
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLH-------------IPVYDRT--------PFEGLVKFVEETVRREH 236 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~D-------------l~G~G~S--------s~~~~a~dv~~~i~~l~ 236 (756)
+.| |||+||++++...|..+.+.|..++.|+++| ++|+|.+ ++.+.++++.++++.+.
T Consensus 16 ~~p-vv~lHG~g~~~~~~~~~~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (209)
T 3og9_A 16 LAP-LLLLHSTGGDEHQLVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTDEVSLLA 94 (209)
T ss_dssp SCC-EEEECCTTCCTTTTHHHHHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-EEEEeCCCCCHHHHHHHHHhcCCCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 477 9999999999999999999999999999999 8888875 24444556666665543
Q ss_pred ccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChh
Q 004396 237 ASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPI 314 (756)
Q Consensus 237 ~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (756)
... ..++++|+||||||.+|+.+|.++|+.++++|++++.......
T Consensus 95 ~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~-------------------------------- 142 (209)
T 3og9_A 95 EKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFE-------------------------------- 142 (209)
T ss_dssp HHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCC--------------------------------
T ss_pred HhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccc--------------------------------
Confidence 322 2358999999999999999999999999999999874421000
Q ss_pred HHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCC
Q 004396 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLP 394 (756)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp 394 (756)
......++|+++++|++|.++|
T Consensus 143 ----------------------------------------------------------~~~~~~~~p~li~~G~~D~~v~ 164 (209)
T 3og9_A 143 ----------------------------------------------------------QTVQLDDKHVFLSYAPNDMIVP 164 (209)
T ss_dssp ----------------------------------------------------------CCCCCTTCEEEEEECTTCSSSC
T ss_pred ----------------------------------------------------------ccccccCCCEEEEcCCCCCccC
Confidence 0012356899999999999999
Q ss_pred CHHHHHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 395 SEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 395 ~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
.+. ++++.+.++ .+++++++ +||.+..+..+++.+.|.+
T Consensus 165 ~~~-~~~~~~~l~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~l~~ 207 (209)
T 3og9_A 165 QKN-FGDLKGDLEDSGCQLEIYESS-LGHQLTQEEVLAAKKWLTE 207 (209)
T ss_dssp HHH-HHHHHHHHHHTTCEEEEEECS-STTSCCHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHcCCceEEEEcC-CCCcCCHHHHHHHHHHHHh
Confidence 984 877777664 46777887 7999987777777666653
|
| >1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.9e-17 Score=171.92 Aligned_cols=198 Identities=12% Similarity=0.030 Sum_probs=130.5
Q ss_pred CcEEec-------ccCCCCCCCEEEEecCCCchhhHHHHHHHHHH---hcCceeccccccccccccccccCCCccHHHH-
Q 004396 485 GKIVKG-------LAGVPNEGPVLLVGYHMLLGFELYSLVEEFLR---EKNIMVHGIAHPEIFLGRLENSSNEFGMTDW- 553 (756)
Q Consensus 485 ~~~v~g-------~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~---~~~~~~r~la~~~~f~~~~~~~~p~~~~~~~- 553 (756)
|.+|.| .||+|++++|||++||++. +|.+++...+.+ .....+.++|...++.. |+...+
T Consensus 110 ~s~V~G~e~~~~~~E~l~~~~~vIfisNHQS~-~D~~vi~~~l~~~~~~l~~~~~fVAk~eL~~~--------Pl~~Pfs 180 (367)
T 1iuq_A 110 NSFVGNLSLFKDIEEKLQQGHNVVLISNHQTE-ADPAIISLLLEKTNPYIAENTIFVAGDRVLAD--------PLCKPFS 180 (367)
T ss_dssp GCEEECHHHHHHHHHHHHTTCEEEEEECCCCT-THHHHHHHHHTTTCHHHHHHCEEEECTHHHHC--------TTTHHHH
T ss_pred CCEeecchhhhhHHhhccCCCcEEEEECCccc-hhHHHHHHHHhhcccccccceEEEeehhhhcC--------ccccchh
Confidence 555778 7888889999999999977 599887776421 11236888999998876 344333
Q ss_pred -HHHcCcccc----C------HH----------hHHHHhcC-CCeEEEEeCcchhccccCCcceeEEcCCchhHH----H
Q 004396 554 -LKVMGAVPV----A------AR----------NLFKLLST-KSHVLLYPGGAREALHYKGEEYKLFWPEQQEFV----R 607 (756)
Q Consensus 554 -~~~~g~v~v----~------~~----------~~~~~l~~-g~~v~ifPeG~re~~~~~~~~~~l~~~~~~gf~----r 607 (756)
.+.++++.. + |+ .+.++|++ |.+++|||||||.......+... ..+|+.|.+ +
T Consensus 181 ~g~~l~cI~~kk~id~~p~l~r~~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l~-~~~Fk~gs~~~~~~ 259 (367)
T 1iuq_A 181 IGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWY-PAPFDASSVDNMRR 259 (367)
T ss_dssp HTSEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBC-CCCCCHHHHHHHHH
T ss_pred hhhheeeEEecccCCCcchhhhhhhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCccc-cccccchhhhHHHH
Confidence 122334443 3 43 25567788 66999999999975432123332 237999988 9
Q ss_pred HHHHcCCc--eeeeeeecccchhhhhcCccccccccchHHHHHHhhcccccccccccccccccccccCccCCCCCceEEE
Q 004396 608 MAARFGAT--IVPFGAVGEDDIADLVLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYY 685 (756)
Q Consensus 608 lA~~~g~~--IVPv~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~~p~~p~~~~~ 685 (756)
||.++|+| |||+++. ..++++-...-+ +.++ .-| . ..++++.+
T Consensus 260 LA~ksg~P~hIvPvaI~-t~~imppp~~ve------------~~~g----~~r-----------------~-i~~~~V~v 304 (367)
T 1iuq_A 260 LIQHSDVPGHLFPLALL-CHDIMPPPSQVE------------IEIG----EKR-----------------V-IAFNGAGL 304 (367)
T ss_dssp HHHTSSSCEEEEEEEEE-CGGGSCCC--------------------------C-----------------C-CCCBCCEE
T ss_pred HHHHcCCCceEEEEEEE-eccccCCccccc------------cccc----ccc-----------------e-eecccEEE
Confidence 99999999 9999998 445532100000 0000 000 0 13689999
Q ss_pred EeCCcccCCCCC-CcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004396 686 LFGKPIQTKGRE-VSLKDKENANELYLHIKSQVERCLDYLLKK 727 (756)
Q Consensus 686 ~~G~PI~~~~~~-~~~~~~~~~~~l~~~v~~~v~~~~~~l~~~ 727 (756)
.||+||+++++. ...++++..+++.+++++.|.+.++++...
T Consensus 305 ~ig~pI~~~~l~~~~e~~~e~~~~l~e~v~~~I~~~y~~l~~~ 347 (367)
T 1iuq_A 305 SVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTA 347 (367)
T ss_dssp EECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998753 233345556678888899888888777544
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=7.6e-17 Score=167.40 Aligned_cols=202 Identities=14% Similarity=0.121 Sum_probs=137.7
Q ss_pred ccccCCCCCceeeeeccCCC-CCCCCCEEEEECCC---CCchhhHHHhHhhh-cCCcEEEEeccCCCCC----CChhHHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGR-PLKGSPTLLFLPGI---DGLGLGLILHHKPL-GKAFEVRCLHIPVYDR----TPFEGLV 225 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~-~~~~~p~lV~lHG~---~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~----Ss~~~~a 225 (756)
.+...+|.....+.+..... +....|+||++||. .++...|..++..| .+||.|+++|+||+|. +++....
T Consensus 18 ~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~ 97 (276)
T 3hxk_A 18 TFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNYNFLSQNL 97 (276)
T ss_dssp ECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCSCTHHHHH
T ss_pred cccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCCCcCchHH
Confidence 34445555543333322210 11357999999994 45667788888888 6899999999999999 4677777
Q ss_pred HHHHHHHHHhhccC-----CCCCEEEEEeChhhHHHHHHHHh-CCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHH
Q 004396 226 KFVEETVRREHASS-----PEKPIYLVGDSFGGCLALAVAAR-NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH 299 (756)
Q Consensus 226 ~dv~~~i~~l~~~~-----~~~~v~LvGhS~GG~vAl~~A~~-~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~ 299 (756)
+|+.++++.+.... ...+++|+||||||.+|+.+|.+ .+..++++|+++|....... ...... .
T Consensus 98 ~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~-~~~~~~----~----- 167 (276)
T 3hxk_A 98 EEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFG-WPSDLS----H----- 167 (276)
T ss_dssp HHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSS-CSSSSS----S-----
T ss_pred HHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhh-CCcchh----h-----
Confidence 88877777765432 24589999999999999999998 78999999999987643222 100000 0
Q ss_pred HhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCC
Q 004396 300 CAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVK 379 (756)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 379 (756)
.. +.... . ..+. ....+.+++
T Consensus 168 ---~~----~~~~~----------------~-----~~~~-------------------------------~~~~~~~~~ 188 (276)
T 3hxk_A 168 ---FN----FEIEN----------------I-----SEYN-------------------------------ISEKVTSST 188 (276)
T ss_dssp ---SC----CCCSC----------------C-----GGGB-------------------------------TTTTCCTTS
T ss_pred ---hh----cCchh----------------h-----hhCC-------------------------------hhhccccCC
Confidence 00 00000 0 0000 013456778
Q ss_pred CcEEEEEeCCCCCCCCHHHHHHHHHhCC----CeEEEEEcCCCCcccccch
Q 004396 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEG 426 (756)
Q Consensus 380 ~PvLvI~G~~D~~vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p 426 (756)
+|+|+++|++|.++|.+. ++.+.+.++ ++++++++++||......+
T Consensus 189 ~P~lii~G~~D~~vp~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 238 (276)
T 3hxk_A 189 PPTFIWHTADDEGVPIYN-SLKYCDRLSKHQVPFEAHFFESGPHGVSLANR 238 (276)
T ss_dssp CCEEEEEETTCSSSCTHH-HHHHHHHHHTTTCCEEEEEESCCCTTCTTCST
T ss_pred CCEEEEecCCCceeChHH-HHHHHHHHHHcCCCeEEEEECCCCCCccccCc
Confidence 999999999999999985 887777663 4699999999998877655
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=160.81 Aligned_cols=165 Identities=13% Similarity=0.076 Sum_probs=129.3
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCC---C----------C---ChhHHHHHHHHHHHHhhccC--
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYD---R----------T---PFEGLVKFVEETVRREHASS-- 239 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G---~----------S---s~~~~a~dv~~~i~~l~~~~-- 239 (756)
++|+|||+||++++...|..+.+.|+++|.|+++|.+++. . . ++.+.++++.++++.+....
T Consensus 29 ~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 108 (223)
T 3b5e_A 29 SRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGL 108 (223)
T ss_dssp CCCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEecCCCCHHHHHHHHHhcCCCceEEEeCCCCCcCCccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4699999999999999999999999889999999987631 1 1 24556677777777664321
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHH
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (756)
..++++|+||||||.+|+.+|.++|++++++|++++...... .
T Consensus 109 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------------------------------~------ 151 (223)
T 3b5e_A 109 NLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH-------------------------------V------ 151 (223)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS-------------------------------C------
T ss_pred CCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc-------------------------------c------
Confidence 235899999999999999999999999999999998542100 0
Q ss_pred hhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHH
Q 004396 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA 399 (756)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~ 399 (756)
.....+++|+++++|++|.++|.+. +
T Consensus 152 -----------------------------------------------------~~~~~~~~P~li~~G~~D~~v~~~~-~ 177 (223)
T 3b5e_A 152 -----------------------------------------------------PATDLAGIRTLIIAGAADETYGPFV-P 177 (223)
T ss_dssp -----------------------------------------------------CCCCCTTCEEEEEEETTCTTTGGGH-H
T ss_pred -----------------------------------------------------ccccccCCCEEEEeCCCCCcCCHHH-H
Confidence 0112357899999999999999985 7
Q ss_pred HHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 400 KRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 400 ~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+ +.+.++ ++++++++ +||.+..+..+.+.+.+++
T Consensus 178 ~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~~ 215 (223)
T 3b5e_A 178 A-LVTLLSRHGAEVDARIIP-SGHDIGDPDAAIVRQWLAG 215 (223)
T ss_dssp H-HHHHHHHTTCEEEEEEES-CCSCCCHHHHHHHHHHHHC
T ss_pred H-HHHHHHHCCCceEEEEec-CCCCcCHHHHHHHHHHHHh
Confidence 7 777765 58999999 9999988877776666653
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.4e-16 Score=170.63 Aligned_cols=118 Identities=10% Similarity=-0.081 Sum_probs=91.1
Q ss_pred cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHH-hHhhh-cCCcEEEEeccCCCCCCC--------hhHHHHH
Q 004396 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLIL-HHKPL-GKAFEVRCLHIPVYDRTP--------FEGLVKF 227 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~-~~~~L-~~gy~Vi~~Dl~G~G~Ss--------~~~~a~d 227 (756)
..||.......+.+.+.+....|+||++||++++...|.. +.+.| .+||.|+++|+||+|.|+ .+..++|
T Consensus 75 ~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~d 154 (367)
T 2hdw_A 75 NRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASPDINTED 154 (367)
T ss_dssp CTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSSSCCCHHHHHHH
T ss_pred cCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCccccchhhHHHH
Confidence 3345443333343433212346899999999999988875 77778 678999999999999884 5678889
Q ss_pred HHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCC
Q 004396 228 VEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPA 276 (756)
Q Consensus 228 v~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~ 276 (756)
+.++++.+.... ...+++++|||+||.+++.+|.++| .++++|+++|.
T Consensus 155 ~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~ 204 (367)
T 2hdw_A 155 FSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMY 204 (367)
T ss_dssp HHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred HHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccc
Confidence 888888876542 1358999999999999999999998 59999999875
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.68 E-value=4.4e-17 Score=172.23 Aligned_cols=193 Identities=14% Similarity=0.142 Sum_probs=135.7
Q ss_pred CCCCEEEEECC---CCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhc---cCCCCCEEEEEe
Q 004396 177 KGSPTLLFLPG---IDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHA---SSPEKPIYLVGD 249 (756)
Q Consensus 177 ~~~p~lV~lHG---~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~---~~~~~~v~LvGh 249 (756)
.+.|+||++|| ..++...|..+++.| .+||.|+++|+||+|.+++.+..+|+.++++.+.. ..+..+++|+||
T Consensus 80 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~ 159 (303)
T 4e15_A 80 NQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGH 159 (303)
T ss_dssp TTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred CCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhhhcCCCeEEEEee
Confidence 35899999999 446666777778888 67999999999999999988888888888877643 334568999999
Q ss_pred ChhhHHHHHHHHhCCC-------cceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhh
Q 004396 250 SFGGCLALAVAARNPT-------IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIE 322 (756)
Q Consensus 250 S~GG~vAl~~A~~~P~-------~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (756)
||||.+|+.+|.+.+. .++++|+++|..... ....... ......+..
T Consensus 160 S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~--------~~~~~~~--------~~~~~~~~~---------- 213 (303)
T 4e15_A 160 XAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLR--------ELSNLES--------VNPKNILGL---------- 213 (303)
T ss_dssp THHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCH--------HHHTCTT--------TSGGGTTCC----------
T ss_pred cHHHHHHHHHHhccccccCcccccccEEEEEeeeeccH--------hhhcccc--------cchhhhhcC----------
Confidence 9999999999987542 799999999865321 0100000 000000000
Q ss_pred cCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhcc----CCCCcEEEEEeCCCCCCCCHHH
Q 004396 323 NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH----AVKAEVLVLASGKDNMLPSEDE 398 (756)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~PvLvI~G~~D~~vp~~~~ 398 (756)
.. +.+....+. ...+. ++++|+|+++|++|..++.+.
T Consensus 214 ---~~--------~~~~~~sp~---------------------------~~~~~~~~~~~~~P~lii~G~~D~~v~~~~- 254 (303)
T 4e15_A 214 ---NE--------RNIESVSPM---------------------------LWEYTDVTVWNSTKIYVVAAEHDSTTFIEQ- 254 (303)
T ss_dssp ---CT--------TTTTTTCGG---------------------------GCCCCCGGGGTTSEEEEEEEEESCHHHHHH-
T ss_pred ---CH--------HHHHHcCch---------------------------hhcccccccCCCCCEEEEEeCCCCCCchHH-
Confidence 00 000000000 01222 348999999999999999985
Q ss_pred HHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 399 AKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 399 ~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
++.+.+.++ ++++++++++||+.++|...+.+..+.
T Consensus 255 ~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~ 294 (303)
T 4e15_A 255 SRHYADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVS 294 (303)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHH
T ss_pred HHHHHHHHHHCCCceEEEEeCCCCchHHHHHHhCCCcHHH
Confidence 888887775 679999999999999998887776665
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=8.4e-16 Score=164.71 Aligned_cols=210 Identities=14% Similarity=0.028 Sum_probs=131.7
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----Ch----------
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PF---------- 221 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----s~---------- 221 (756)
...||..+....+.+.+. ....|+||++||++++...+.......+++|.|+++|+||+|.| +.
T Consensus 74 ~~~dg~~i~~~~~~P~~~-~~~~p~vv~~HG~g~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~ 152 (337)
T 1vlq_A 74 SGYRGQRIKGWLLVPKLE-EEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQ 152 (337)
T ss_dssp ECGGGCEEEEEEEEECCS-CSSEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCC
T ss_pred EcCCCCEEEEEEEecCCC-CCCccEEEEEcCCCCCCCCchhhcchhhCCCEEEEecCCCCCCcccCCCCcccccccCCCC
Confidence 344665543333333331 12468999999998886554433333378999999999999954 22
Q ss_pred -----------------hHHHHHHHHHHHHhhccCC--CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcC
Q 004396 222 -----------------EGLVKFVEETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS 282 (756)
Q Consensus 222 -----------------~~~a~dv~~~i~~l~~~~~--~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~ 282 (756)
....+|+.++++.+..... ..+++++|||+||.+++.+|..+| .++++|+.+|....
T Consensus 153 ~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~~~~--- 228 (337)
T 1vlq_A 153 YPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCH--- 228 (337)
T ss_dssp CSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCC---
T ss_pred CCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCcccC---
Confidence 2678888888888764421 248999999999999999999998 58999998885421
Q ss_pred CcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHH
Q 004396 283 QLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLK 362 (756)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (756)
.......... .+. .....+... . .........
T Consensus 229 ----~~~~~~~~~~---------------~~~--------------~~~~~~~~~--------------~-~~~~~~~~~ 260 (337)
T 1vlq_A 229 ----FRRAVQLVDT---------------HPY--------------AEITNFLKT--------------H-RDKEEIVFR 260 (337)
T ss_dssp ----HHHHHHHCCC---------------TTH--------------HHHHHHHHH--------------C-TTCHHHHHH
T ss_pred ----HHHHHhcCCC---------------cch--------------HHHHHHHHh--------------C-chhHHHHHH
Confidence 0000000000 000 000000000 0 000000000
Q ss_pred HHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC-CeEEEEEcCCCCccc
Q 004396 363 LLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLL 422 (756)
Q Consensus 363 ~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~-~~~l~~i~~aGH~~~ 422 (756)
.+... .....+.++++|+|+++|++|.++|++. ...+.+.++ ++++++++++||...
T Consensus 261 ~~~~~--~~~~~~~~i~~P~lii~G~~D~~~p~~~-~~~~~~~l~~~~~~~~~~~~gH~~~ 318 (337)
T 1vlq_A 261 TLSYF--DGVNFAARAKIPALFSVGLMDNICPPST-VFAAYNYYAGPKEIRIYPYNNHEGG 318 (337)
T ss_dssp HHHTT--CHHHHHTTCCSCEEEEEETTCSSSCHHH-HHHHHHHCCSSEEEEEETTCCTTTT
T ss_pred hhhhc--cHHHHHHHcCCCEEEEeeCCCCCCCchh-HHHHHHhcCCCcEEEEcCCCCCCCc
Confidence 00000 0113456788999999999999999995 899998887 589999999999953
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=6.9e-16 Score=160.24 Aligned_cols=178 Identities=14% Similarity=0.168 Sum_probs=117.0
Q ss_pred CCCEEEEECC---CCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--ChhHHHHHHHHHHHHhhcc-----CCCCCEEE
Q 004396 178 GSPTLLFLPG---IDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--PFEGLVKFVEETVRREHAS-----SPEKPIYL 246 (756)
Q Consensus 178 ~~p~lV~lHG---~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--s~~~~a~dv~~~i~~l~~~-----~~~~~v~L 246 (756)
..|+||++|| ..++...|..+++.| +.+|.|+++|+||||.+ ++....+|+.+.++.+... ....+++|
T Consensus 34 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l 113 (277)
T 3bxp_A 34 DYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQSVYPWALQQLGATIDWITTQASAHHVDCQRIIL 113 (277)
T ss_dssp CEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTCCCTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCCccCchHHHHHHHHHHHHHhhhhhcCCChhheEE
Confidence 4789999999 667778898899988 57899999999997733 4455555655555544321 11248999
Q ss_pred EEeChhhHHHHHHHHhC--------------CCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCC
Q 004396 247 VGDSFGGCLALAVAARN--------------PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGD 312 (756)
Q Consensus 247 vGhS~GG~vAl~~A~~~--------------P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (756)
+||||||.+|+.+|.++ +.+++++|+++|....... .... . ...
T Consensus 114 ~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~-~~~~--------~----~~~--------- 171 (277)
T 3bxp_A 114 AGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAG-FPTT--------S----AAR--------- 171 (277)
T ss_dssp EEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSS-SSSS--------H----HHH---------
T ss_pred EEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCC-CCCc--------c----ccc---------
Confidence 99999999999999985 7789999999987642211 0000 0 000
Q ss_pred hhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCC
Q 004396 313 PIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNM 392 (756)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~ 392 (756)
..+...... .. ....+.++.+|+|+++|++|.+
T Consensus 172 -------------------~~~~~~~~~-----------~~-----------------~~~~~~~~~~P~lii~G~~D~~ 204 (277)
T 3bxp_A 172 -------------------NQITTDARL-----------WA-----------------AQRLVTPASKPAFVWQTATDES 204 (277)
T ss_dssp -------------------HHHCSCGGG-----------SB-----------------GGGGCCTTSCCEEEEECTTCCC
T ss_pred -------------------hhccchhhh-----------cC-----------------HhhccccCCCCEEEEeeCCCCc
Confidence 000000000 00 0133456778999999999999
Q ss_pred CCCHHHHHHHHHhCC----CeEEEEEcCCCCcccccc
Q 004396 393 LPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEE 425 (756)
Q Consensus 393 vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~ 425 (756)
+|.+. ++.+.+.++ ++++++++++||......
T Consensus 205 vp~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 240 (277)
T 3bxp_A 205 VPPIN-SLKYVQAMLQHQVATAYHLFGSGIHGLALAN 240 (277)
T ss_dssp SCTHH-HHHHHHHHHHTTCCEEEEECCCC--------
T ss_pred cChHH-HHHHHHHHHHCCCeEEEEEeCCCCccccccc
Confidence 99985 877777653 569999999999665554
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.67 E-value=5.7e-16 Score=158.54 Aligned_cols=185 Identities=13% Similarity=0.125 Sum_probs=134.6
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcC-C---cEEEEeccCCCCCC---------------------------ChhHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGK-A---FEVRCLHIPVYDRT---------------------------PFEGLVK 226 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~-g---y~Vi~~Dl~G~G~S---------------------------s~~~~a~ 226 (756)
.+++|||+||++++...|..+++.|.+ + ++|+.+|++++|.+ +++++++
T Consensus 3 ~~~pvv~iHG~~~~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~ 82 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV 82 (250)
T ss_dssp SCCCEEEECCCGGGHHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHH
Confidence 356799999999999999999999943 3 78999988887752 2456789
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC-----CCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHh
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-----PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCA 301 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~-----P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (756)
++.++++.+...++.++++||||||||.+++.++.++ |+.|+++|+++++.........
T Consensus 83 ~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~~---------------- 146 (250)
T 3lp5_A 83 WLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTT---------------- 146 (250)
T ss_dssp HHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCSS----------------
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccccc----------------
Confidence 9999999987777777999999999999999999987 6789999999876533211000
Q ss_pred HHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCc
Q 004396 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAE 381 (756)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 381 (756)
... ...+.+.. ....+++ ++|
T Consensus 147 ----------------------~~~--~~~~~l~~----------------------------------~~~~lp~-~vp 167 (250)
T 3lp5_A 147 ----------------------AKT--SMFKELYR----------------------------------YRTGLPE-SLT 167 (250)
T ss_dssp ----------------------CCC--HHHHHHHH----------------------------------TGGGSCT-TCE
T ss_pred ----------------------ccC--HHHHHHHh----------------------------------ccccCCC-Cce
Confidence 000 00000000 0134444 789
Q ss_pred EEEEEeC----CCCCCCCHHHHHHHHHhCCC----eEEEEEc--CCCCcccccchhhHHHHhhhcccccc
Q 004396 382 VLVLASG----KDNMLPSEDEAKRLNNSLQN----CIVRNFK--DNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 382 vLvI~G~----~D~~vp~~~~~~~l~~~l~~----~~l~~i~--~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
+++|+|+ .|..+|.+. ++.+...+++ .+...+. +++|..+.++| ++++.|. .|+..
T Consensus 168 vl~I~G~~~~~~Dg~Vp~~s-a~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~--~FL~~ 233 (250)
T 3lp5_A 168 VYSIAGTENYTSDGTVPYNS-VNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIR--QYLLA 233 (250)
T ss_dssp EEEEECCCCCCTTTBCCHHH-HTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHH--HHTSC
T ss_pred EEEEEecCCCCCCceeeHHH-HHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHH--HHHhc
Confidence 9999999 999999985 8777766653 2333443 57799999999 6777777 45544
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=1e-15 Score=155.15 Aligned_cols=171 Identities=19% Similarity=0.186 Sum_probs=128.4
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcC------CcEEEEeccCCC-------------------CCC------ChhHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGK------AFEVRCLHIPVY-------------------DRT------PFEGLVK 226 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~------gy~Vi~~Dl~G~-------------------G~S------s~~~~a~ 226 (756)
..|+|||+||++++...|..+...|.. ++.|+++|.|++ +.+ +++++++
T Consensus 22 ~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 101 (239)
T 3u0v_A 22 HSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMCQ 101 (239)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHHHHH
T ss_pred CCcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHHHHH
Confidence 478999999999999999988888743 599999887542 222 3677788
Q ss_pred HHHHHHHHhhcc-CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhH
Q 004396 227 FVEETVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (756)
Q Consensus 227 dv~~~i~~l~~~-~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (756)
++..+++..... ....+++|+||||||.+|+.+|.++|+.++++|++++....... .
T Consensus 102 ~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~---------------~------- 159 (239)
T 3u0v_A 102 VLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA---------------V------- 159 (239)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH---------------H-------
T ss_pred HHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH---------------H-------
Confidence 888888774322 23458999999999999999999999999999999985421000 0
Q ss_pred hhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCc-EEE
Q 004396 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAE-VLV 384 (756)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLv 384 (756)
... .......+| +|+
T Consensus 160 -------------------------~~~---------------------------------------~~~~~~~~pp~li 175 (239)
T 3u0v_A 160 -------------------------YQA---------------------------------------LQKSNGVLPELFQ 175 (239)
T ss_dssp -------------------------HHH---------------------------------------HHHCCSCCCCEEE
T ss_pred -------------------------HHH---------------------------------------HHhhccCCCCEEE
Confidence 000 001234567 999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 385 LASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 385 I~G~~D~~vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
++|++|.+++.+. ++.+.+.++ ++++++++++||....+..+.+.+.|.+
T Consensus 176 ~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 229 (239)
T 3u0v_A 176 CHGTADELVLHSW-AEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILT 229 (239)
T ss_dssp EEETTCSSSCHHH-HHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred EeeCCCCccCHHH-HHHHHHHHHHcCCcEEEEEeCCCCCcCCHHHHHHHHHHHHH
Confidence 9999999999974 777766654 7899999999999997777776666663
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.67 E-value=5.4e-16 Score=159.80 Aligned_cols=168 Identities=10% Similarity=-0.010 Sum_probs=123.2
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-ChhHHHHHHHHHHHH----hhccCCCCCEEEEEeCh
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-PFEGLVKFVEETVRR----EHASSPEKPIYLVGDSF 251 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-s~~~~a~dv~~~i~~----l~~~~~~~~v~LvGhS~ 251 (756)
..|+|||+||++++...|..+++.| .+||.|+++|+||.+.. +.....+.+.+.... +.......+++++||||
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~~s~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~ 127 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNAGTGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQ 127 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCSCCTTSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEH
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCCCCccHHHHHHHHHHHHhcccccccccccccCccceEEEEECh
Confidence 3689999999999999999999999 56899999999975332 122223333332220 01111124899999999
Q ss_pred hhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHH
Q 004396 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKL 331 (756)
Q Consensus 252 GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (756)
||.+++.+| .+++++++|+++|.... .+ ..
T Consensus 128 GG~~a~~~a--~~~~v~~~v~~~~~~~~--------------------------------~~-----------~~----- 157 (258)
T 2fx5_A 128 GGGGSIMAG--QDTRVRTTAPIQPYTLG--------------------------------LG-----------HD----- 157 (258)
T ss_dssp HHHHHHHHT--TSTTCCEEEEEEECCSS--------------------------------TT-----------CC-----
T ss_pred HHHHHHHhc--cCcCeEEEEEecCcccc--------------------------------cc-----------cc-----
Confidence 999999888 45789999998873310 00 00
Q ss_pred HHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhC-CCeE
Q 004396 332 EQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL-QNCI 410 (756)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l-~~~~ 410 (756)
...+.++++|+|+|+|++|.+++.+...+.+.+.. .+++
T Consensus 158 ----------------------------------------~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~ 197 (258)
T 2fx5_A 158 ----------------------------------------SASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVF 197 (258)
T ss_dssp ----------------------------------------GGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEE
T ss_pred ----------------------------------------hhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeE
Confidence 03456788999999999999999873266776664 3589
Q ss_pred EEEEcCCCCcccccchhhHHHHhhh
Q 004396 411 VRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 411 l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+++++++||+.+.++++.+.+.+.+
T Consensus 198 ~~~~~g~~H~~~~~~~~~~~~~i~~ 222 (258)
T 2fx5_A 198 WGERRYVSHFEPVGSGGAYRGPSTA 222 (258)
T ss_dssp EEEESSCCTTSSTTTCGGGHHHHHH
T ss_pred EEEECCCCCccccchHHHHHHHHHH
Confidence 9999999999999999999888873
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-15 Score=156.08 Aligned_cols=240 Identities=13% Similarity=0.155 Sum_probs=133.4
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCC-CChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDR-TPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~-Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vA 256 (756)
++++|||+||++++...|..+.+.|. ++|+++|+++... .+++++++++.+.++.+.. ..+++|+||||||.+|
T Consensus 23 ~~~~l~~~hg~~~~~~~~~~~~~~L~--~~v~~~d~~~~~~~~~~~~~a~~~~~~i~~~~~---~~~~~l~GhS~Gg~va 97 (283)
T 3tjm_A 23 SERPLFLVHPIEGSTTVFHSLASRLS--IPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQP---EGPYRVAGYSYGACVA 97 (283)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHCS--SCEEEECCCTTSCCSCHHHHHHHHHHHHTTTCC---SSCCEEEEETHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhcC--ceEEEEecCCCCCCCCHHHHHHHHHHHHHHhCC---CCCEEEEEECHhHHHH
Confidence 36889999999999999999999998 9999999987653 3799999999998887532 3489999999999999
Q ss_pred HHHHHhC---CCcce---EEEEeCCCCcCCcCCcCCchhHHhhc-h----hHHHHhHHhHhhhhcCChhHHHHHhhhcCC
Q 004396 257 LAVAARN---PTIDL---ILILSNPATSFGRSQLQPLFPILKAM-P----DELHCAVPYLLSYVMGDPIKMAMVNIENRL 325 (756)
Q Consensus 257 l~~A~~~---P~~v~---~lVLi~p~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (756)
+.+|.+. |+.+. ++|++++...+..... ....... + ......+..+...+...+............
T Consensus 98 ~~~a~~~~~~~~~v~~~~~lvlid~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~ 174 (283)
T 3tjm_A 98 FEMCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYT---GSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLK 174 (283)
T ss_dssp HHHHHHHHHHHTTSCCCCEEEEESCCTTHHHHHH---HHHHTTSCTTCHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTSS
T ss_pred HHHHHHHHHcCCCCCccceEEEEcCCchhhhhhh---hhhhhccCCCCchHHHHHHHHHHHHHhcccchhHHHHHHhcCC
Confidence 9999866 78898 9999998553210000 0000000 0 000011111111111111000000000001
Q ss_pred ChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHh--hhccCCCCcEEEEEeCCCCCC--CCHHHHHH
Q 004396 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYAN--SRLHAVKAEVLVLASGKDNML--PSEDEAKR 401 (756)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~i~~PvLvI~G~~D~~v--p~~~~~~~ 401 (756)
...+....+.+.+. ........+.+......+........ ....++++|+++++|++|... +.+. ...
T Consensus 175 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~Pvl~l~g~~d~~~~~~~~~-~~~ 246 (283)
T 3tjm_A 175 GLEERVAAAVDLII-------KSHQGLDRQELSFAARSFYYKLRAAEQYTPKAKYHGNVMLLRAKTGGAYGEAAGA-DYN 246 (283)
T ss_dssp SHHHHHHHHHHHHH-------HHCTTSCHHHHHHHHHHHHHHHHHHHHCCCSSCBCSCEEEEEC--------CCTT-TTT
T ss_pred CHHHHHHHHHHHHH-------hhccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCEEEEecCCccccccccCc-ccc
Confidence 11111111111111 11111233333333333332211111 111478999999999999773 3332 344
Q ss_pred HHHhCC-CeEEEEEcCCCCcccccchh--hHHHHhh
Q 004396 402 LNNSLQ-NCIVRNFKDNGHTLLLEEGI--SLLTIIK 434 (756)
Q Consensus 402 l~~~l~-~~~l~~i~~aGH~~~~e~p~--~~~~~I~ 434 (756)
+.+..+ .++++.++ +||+.++++|. ++++.|.
T Consensus 247 w~~~~~~~~~~~~v~-ggH~~~l~~p~~~~va~~i~ 281 (283)
T 3tjm_A 247 LSQVCDGKVSVHVIE-GDHATLLEGSGLESIISIIH 281 (283)
T ss_dssp GGGTBCSCEEEEECS-SCTTGGGSHHHHHHHHHHHH
T ss_pred hHhhccCceEEEEEC-CCCceeeCCchHHHHHHHHh
Confidence 455554 47889997 59999999886 6666664
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-15 Score=169.20 Aligned_cols=189 Identities=14% Similarity=0.134 Sum_probs=121.5
Q ss_pred CCCEEEEECCCCCchh-hHHHhHhhh-cCCcEEEEeccCCCCCCC-------hhHHHHHHHHHHHHhhccCCCCCEEEEE
Q 004396 178 GSPTLLFLPGIDGLGL-GLILHHKPL-GKAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHASSPEKPIYLVG 248 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~-~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-------~~~~a~dv~~~i~~l~~~~~~~~v~LvG 248 (756)
..|+||++||++++.. .|..+...| ..||.|+++|+||+|.|+ .+++++++.+++..... ....+++++|
T Consensus 192 ~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~v~~~l~~~~~-vd~~~i~l~G 270 (415)
T 3mve_A 192 PHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLNELFSIPY-VDHHRVGLIG 270 (415)
T ss_dssp CEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCCSCTTHHHHHHHHHGGGCTT-EEEEEEEEEE
T ss_pred CCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHhCcC-CCCCcEEEEE
Confidence 4789999999999854 565666777 789999999999999883 55666666666655321 0134899999
Q ss_pred eChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChH
Q 004396 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (756)
|||||.+|+.+|..+|++++++|+++|....... ........+......+... .+.. ...
T Consensus 271 ~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~----~g~~----------~~~-- 330 (415)
T 3mve_A 271 FRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFA----SPQKLQQMPKMYLDVLASR----LGKS----------VVD-- 330 (415)
T ss_dssp ETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHH----CHHHHTTSCHHHHHHHHHH----TTCS----------SBC--
T ss_pred ECHHHHHHHHHHHhCCcceeEEEEECCccccccc----cHHHHHHhHHHHHHHHHHH----hCCC----------ccC--
Confidence 9999999999999999999999999986421000 0001111111111111100 0000 000
Q ss_pred HHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhh--ccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhC
Q 004396 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSR--LHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406 (756)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l 406 (756)
...+...+..+ ....... ..++++|+|+++|++|.++|.+. ++.+.+..
T Consensus 331 --~~~~~~~~~~~--------------------------~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~-~~~l~~~~ 381 (415)
T 3mve_A 331 --IYSLSGQMAAW--------------------------SLKVQGFLSSRKTKVPILAMSLEGDPVSPYSD-NQMVAFFS 381 (415)
T ss_dssp --HHHHHHHGGGG--------------------------CTTTTTTTTSSCBSSCEEEEEETTCSSSCHHH-HHHHHHTB
T ss_pred --HHHHHHHHhhc--------------------------CcccccccccCCCCCCEEEEEeCCCCCCCHHH-HHHHHHhC
Confidence 00000000000 0000001 35789999999999999999995 99999999
Q ss_pred CCeEEEEEcC
Q 004396 407 QNCIVRNFKD 416 (756)
Q Consensus 407 ~~~~l~~i~~ 416 (756)
++++++++++
T Consensus 382 ~~~~l~~i~g 391 (415)
T 3mve_A 382 TYGKAKKISS 391 (415)
T ss_dssp TTCEEEEECC
T ss_pred CCceEEEecC
Confidence 9999999998
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.66 E-value=5.5e-15 Score=153.92 Aligned_cols=241 Identities=13% Similarity=0.081 Sum_probs=139.6
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCC---CchhhH-HHhHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGID---GLGLGL-ILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEE 230 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~---~s~~~~-~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~ 230 (756)
+...+|.+.+++.+.. ...|+||++||.+ ++...| ..+...+ ..+|.|+++|+|+.+..++.+.++|+.+
T Consensus 9 ~~~~~~~~~~~y~p~~-----~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~~~p~~~~D~~~ 83 (274)
T 2qru_A 9 QTLANGATVTIYPTTT-----EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNTKIDHILRTLTE 83 (274)
T ss_dssp EECTTSCEEEEECCSS-----SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTSCHHHHHHHHHH
T ss_pred ccccCCeeEEEEcCCC-----CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCCCCcHHHHHHHH
Confidence 3444555554443321 2478999999987 566555 4556666 5579999999999999999999999999
Q ss_pred HHHHhhccCC-CCCEEEEEeChhhHHHHHHHH---hCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHh
Q 004396 231 TVRREHASSP-EKPIYLVGDSFGGCLALAVAA---RNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (756)
Q Consensus 231 ~i~~l~~~~~-~~~v~LvGhS~GG~vAl~~A~---~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (756)
+++.+..... .++++|+|+|+||.+|+.+|. ..+..++++|++.|............ ...+...........
T Consensus 84 al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 159 (274)
T 2qru_A 84 TFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRK----LLKQAISAKEIAAID 159 (274)
T ss_dssp HHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCC----SCSSCCCSGGGTTSC
T ss_pred HHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchh----hccccccHHHHhhhc
Confidence 9988764432 458999999999999999997 36788999999887554111000000 000000000000000
Q ss_pred hhhcCChhHHHHHhhhcCCChHHHHHHHH-hhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEE
Q 004396 307 SYVMGDPIKMAMVNIENRLPPRIKLEQLS-NNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (756)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI 385 (756)
. ..+... ...... ...... .....+................. . ...+.++ .|+|++
T Consensus 160 ~---~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~------~~~l~~l-pP~li~ 216 (274)
T 2qru_A 160 Q---TKPVWD------DPFLSR-YLLYHYSIQQALLPHFYGLPENGDWSAYAL------S------DETLKTF-PPCFST 216 (274)
T ss_dssp C---SSCCSC------CTTCTT-HHHHHHHHHTTCHHHHHTCCTTSCCGGGCC------C------HHHHHTS-CCEEEE
T ss_pred c---cCCCCC------Cccccc-hhhhhhhhhhcchhhccCcccccccccCCC------C------hhhhcCC-CCEEEE
Confidence 0 000000 000000 000000 00000000000000000000000 0 0234555 799999
Q ss_pred EeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhH
Q 004396 386 ASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISL 429 (756)
Q Consensus 386 ~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~ 429 (756)
+|++|..++... ++++.+.+++++++++++++|..+.+.+...
T Consensus 217 ~G~~D~~~~~~~-~~~l~~~~~~~~l~~~~g~~H~~~~~~~~~~ 259 (274)
T 2qru_A 217 ASSSDEEVPFRY-SKKIGRTIPESTFKAVYYLEHDFLKQTKDPS 259 (274)
T ss_dssp EETTCSSSCTHH-HHHHHHHSTTCEEEEECSCCSCGGGGTTSHH
T ss_pred EecCCCCcCHHH-HHHHHHhCCCcEEEEcCCCCcCCccCcCCHH
Confidence 999999999884 8999999999999999999999887655544
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-16 Score=165.63 Aligned_cols=101 Identities=20% Similarity=0.178 Sum_probs=82.9
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhhcC--CcEEEEeccCCCCCCChhHHHHHHHHHHHHhhcc-----CCCCCEEEE
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPLGK--AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-----SPEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~~--gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~-----~~~~~v~Lv 247 (756)
+.|+||++||.+ ++...|..++..|++ +|.|+++|+||+|.+++....+|+.++++.+... ....+++|+
T Consensus 72 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~ 151 (311)
T 2c7b_A 72 GLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYKFPTAVEDAYAALKWVADRADELGVDPDRIAVA 151 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCCCCccHHHHHHHHHHHHhhHHHhCCCchhEEEE
Confidence 368999999998 888899999999954 8999999999999998777777766666554322 112489999
Q ss_pred EeChhhHHHHHHHHhCCC----cceEEEEeCCCCc
Q 004396 248 GDSFGGCLALAVAARNPT----IDLILILSNPATS 278 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~----~v~~lVLi~p~~~ 278 (756)
||||||.+|+.+|.++|+ .++++|+++|...
T Consensus 152 G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 186 (311)
T 2c7b_A 152 GDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVN 186 (311)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCC
T ss_pred ecCccHHHHHHHHHHHHhcCCCCceeEEEECCccC
Confidence 999999999999988775 5999999999764
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.5e-15 Score=162.49 Aligned_cols=102 Identities=15% Similarity=0.095 Sum_probs=81.3
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhhc--CCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChh
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~G 252 (756)
+.|+||++||.+ ++...|..++..|+ .+|.|+++|+||.+..++....+|+.+.++.+.......+++|+|||||
T Consensus 95 ~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~G 174 (326)
T 3d7r_A 95 IDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHIDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSG 174 (326)
T ss_dssp CSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEETHH
T ss_pred CCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCCchHHHHHHHHHHHHHHhccCCCcEEEEEECHH
Confidence 478999999954 56778888888884 4899999999999888766666666666555533333458999999999
Q ss_pred hHHHHHHHHhCCCc----ceEEEEeCCCCcC
Q 004396 253 GCLALAVAARNPTI----DLILILSNPATSF 279 (756)
Q Consensus 253 G~vAl~~A~~~P~~----v~~lVLi~p~~~~ 279 (756)
|.+|+.+|.++|+. ++++|+++|+...
T Consensus 175 G~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~ 205 (326)
T 3d7r_A 175 GALALSFVQSLLDNQQPLPNKLYLISPILDA 205 (326)
T ss_dssp HHHHHHHHHHHHHTTCCCCSEEEEESCCCCT
T ss_pred HHHHHHHHHHHHhcCCCCCCeEEEECccccc
Confidence 99999999988766 9999999997643
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.66 E-value=7.5e-16 Score=178.04 Aligned_cols=215 Identities=16% Similarity=0.197 Sum_probs=141.0
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCc--hhhHHHhHhhh-cCCcEEEEeccCC---CCCC--------Chh
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGL--GLGLILHHKPL-GKAFEVRCLHIPV---YDRT--------PFE 222 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s--~~~~~~~~~~L-~~gy~Vi~~Dl~G---~G~S--------s~~ 222 (756)
...+|.......+.+.+. .+..|+||++||.+.+ ...|..+++.| ++||.|+++|+|| ||.+ ...
T Consensus 339 ~~~~g~~i~~~~~~p~~~-~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~ 417 (582)
T 3o4h_A 339 ESFDGSRVPTYVLESGRA-PTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCG 417 (582)
T ss_dssp ECTTSCEEEEEEEEETTS-CSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTT
T ss_pred ECCCCCEEEEEEEcCCCC-CCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhhhccc
Confidence 344665544444444332 1257899999998766 66778888888 6789999999999 6644 123
Q ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhH
Q 004396 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAV 302 (756)
Q Consensus 223 ~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (756)
...+|+.++++.+.......+++|+||||||.+|+.+|.++|++++++|+++|.... ...............
T Consensus 418 ~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~--------~~~~~~~~~~~~~~~ 489 (582)
T 3o4h_A 418 GELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDW--------EEMYELSDAAFRNFI 489 (582)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCH--------HHHHHTCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCH--------HHHhhcccchhHHHH
Confidence 445666666666654422228999999999999999999999999999999984421 111111110000000
Q ss_pred HhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcE
Q 004396 303 PYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEV 382 (756)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 382 (756)
.. .++.. .+.+ . .. .....+.++++|+
T Consensus 490 ~~----~~~~~-----------------~~~~-~-----------------------------~~--sp~~~~~~i~~P~ 516 (582)
T 3o4h_A 490 EQ----LTGGS-----------------REIM-R-----------------------------SR--SPINHVDRIKEPL 516 (582)
T ss_dssp HH----HTTTC-----------------HHHH-H-----------------------------HT--CGGGGGGGCCSCE
T ss_pred HH----HcCcC-----------------HHHH-H-----------------------------hc--CHHHHHhcCCCCE
Confidence 00 00000 0000 0 00 0014467789999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhCCC----eEEEEEcCCCCccc-ccchhhHHHHhh
Q 004396 383 LVLASGKDNMLPSEDEAKRLNNSLQN----CIVRNFKDNGHTLL-LEEGISLLTIIK 434 (756)
Q Consensus 383 LvI~G~~D~~vp~~~~~~~l~~~l~~----~~l~~i~~aGH~~~-~e~p~~~~~~I~ 434 (756)
|+++|++|..+|.+. ++.+.+.+++ +++++++++||.++ .++++++.+.+.
T Consensus 517 lii~G~~D~~v~~~~-~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 572 (582)
T 3o4h_A 517 ALIHPQNASRTPLKP-LLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAV 572 (582)
T ss_dssp EEEEETTCSSSCHHH-HHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHH
T ss_pred EEEecCCCCCcCHHH-HHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHH
Confidence 999999999999995 8888887754 89999999999987 456666666555
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.1e-15 Score=164.19 Aligned_cols=221 Identities=14% Similarity=0.113 Sum_probs=133.8
Q ss_pred CCCEEEEECCCCC---chh--hHHHhHhhhc--CCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCC--------CC
Q 004396 178 GSPTLLFLPGIDG---LGL--GLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSP--------EK 242 (756)
Q Consensus 178 ~~p~lV~lHG~~~---s~~--~~~~~~~~L~--~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~--------~~ 242 (756)
..|+||++||.+. +.. .|..++..|+ .+|.|+++|+||++.+++....+|+.++++.+..... ..
T Consensus 82 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~ 161 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDDAMEALQWIKDSRDEWLTNFADFS 161 (338)
T ss_dssp CEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTCTTHHHHHHHHHHHHHHTCCCHHHHHHEEEE
T ss_pred CceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCCCchHHHHHHHHHHHHHhCCcchhhccCCcc
Confidence 4789999999762 222 3888888885 6899999999999999888888888888887765321 14
Q ss_pred CEEEEEeChhhHHHHHHHHhCCC--------cceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChh
Q 004396 243 PIYLVGDSFGGCLALAVAARNPT--------IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPI 314 (756)
Q Consensus 243 ~v~LvGhS~GG~vAl~~A~~~P~--------~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (756)
+++|+||||||.+|+.+|.++|+ +++++|+++|......... ....... .+
T Consensus 162 ~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~----~~~~~~~----------------~~- 220 (338)
T 2o7r_A 162 NCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTG----SELRLAN----------------DS- 220 (338)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCH----HHHHTTT----------------CS-
T ss_pred eEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCCh----hhhccCC----------------Cc-
Confidence 89999999999999999999888 8999999998764322110 0000000 00
Q ss_pred HHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCC
Q 004396 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLP 394 (756)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp 394 (756)
... ......++..+... .. ......... +... ..+. . .+.+..+++|+|+++|++|.+++
T Consensus 221 ---------~~~-~~~~~~~~~~~~~~-~~-~~~~~~~~~--~~~~-~~~~----~-~~~l~~~~~P~Lvi~G~~D~~~~ 280 (338)
T 2o7r_A 221 ---------RLP-TFVLDLIWELSLPM-GA-DRDHEYCNP--TAES-EPLY----S-FDKIRSLGWRVMVVGCHGDPMID 280 (338)
T ss_dssp ---------SSC-HHHHHHHHHHHSCT-TC-CTTSTTTCC--C-----CCT----H-HHHHHHHTCEEEEEEETTSTTHH
T ss_pred ---------ccC-HHHHHHHHHHhCCC-CC-CCCCcccCC--CCCC-cccc----c-HhhhcCCCCCEEEEECCCCcchH
Confidence 000 00000000000000 00 000000000 0000 0000 0 02334457899999999999987
Q ss_pred CHH-HHHHHHHhCCCeEEEEEcCCCCcccccch---hhHHHHhhhcccccc
Q 004396 395 SED-EAKRLNNSLQNCIVRNFKDNGHTLLLEEG---ISLLTIIKGTCKYRR 441 (756)
Q Consensus 395 ~~~-~~~~l~~~l~~~~l~~i~~aGH~~~~e~p---~~~~~~I~~~~f~rr 441 (756)
... ..+.+.+..+++++++++++||..++++| +++.+.|. .|+.+
T Consensus 281 ~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~--~Fl~~ 329 (338)
T 2o7r_A 281 RQMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILK--KFVVD 329 (338)
T ss_dssp HHHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHH--HHHC-
T ss_pred HHHHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHH--HHHHh
Confidence 431 13445555568899999999999988777 45555554 45543
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-15 Score=151.97 Aligned_cols=161 Identities=18% Similarity=0.187 Sum_probs=118.4
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------------ChhHHHHHHHHHHHHhhcc-CCCC
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------------PFEGLVKFVEETVRREHAS-SPEK 242 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------------s~~~~a~dv~~~i~~l~~~-~~~~ 242 (756)
.+++|||+||+|++...|..+++.| ..++.|+++|.+|++.- .+++..+.+..+++.+... .+.+
T Consensus 21 a~~~Vv~lHG~G~~~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~ 100 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTAADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEAQGIPAE 100 (210)
T ss_dssp CSEEEEEECCTTCCHHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHHhCCChh
Confidence 4679999999999999999999999 57899999998887521 1444455566666554332 2346
Q ss_pred CEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhh
Q 004396 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIE 322 (756)
Q Consensus 243 ~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (756)
+++|+|+|+||.+|+.+|.++|+++.++|.+++........ .
T Consensus 101 ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~-----------------------------~--------- 142 (210)
T 4h0c_A 101 QIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELA-----------------------------I--------- 142 (210)
T ss_dssp GEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCC-----------------------------G---------
T ss_pred hEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhh-----------------------------h---------
Confidence 89999999999999999999999999999988643110000 0
Q ss_pred cCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHH
Q 004396 323 NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (756)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l 402 (756)
.. ..-...++|++++||++|+++|.+. ++++
T Consensus 143 ---------~~---------------------------------------~~~~~~~~Pvl~~hG~~D~~vp~~~-~~~~ 173 (210)
T 4h0c_A 143 ---------GN---------------------------------------YKGDFKQTPVFISTGNPDPHVPVSR-VQES 173 (210)
T ss_dssp ---------GG---------------------------------------CCBCCTTCEEEEEEEESCTTSCHHH-HHHH
T ss_pred ---------hh---------------------------------------hhhhccCCceEEEecCCCCccCHHH-HHHH
Confidence 00 0001124699999999999999995 7776
Q ss_pred HHhCC----CeEEEEEcCCCCcccccc
Q 004396 403 NNSLQ----NCIVRNFKDNGHTLLLEE 425 (756)
Q Consensus 403 ~~~l~----~~~l~~i~~aGH~~~~e~ 425 (756)
.+.+. +++++++|+.||.+..|.
T Consensus 174 ~~~L~~~g~~v~~~~ypg~gH~i~~~e 200 (210)
T 4h0c_A 174 VTILEDMNAAVSQVVYPGRPHTISGDE 200 (210)
T ss_dssp HHHHHHTTCEEEEEEEETCCSSCCHHH
T ss_pred HHHHHHCCCCeEEEEECCCCCCcCHHH
Confidence 66553 578999999999875443
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-15 Score=161.91 Aligned_cols=214 Identities=14% Similarity=0.149 Sum_probs=140.3
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhh
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG 253 (756)
+|+|+|+||++++...|..+++.|..+|+|+++|+||||.+ +++++++++.+.+..+. +..+++|+||||||
T Consensus 101 ~~~l~~lhg~~~~~~~~~~l~~~L~~~~~v~~~d~~g~~~~~~~~~~~~~~a~~~~~~i~~~~---~~~~~~l~G~S~Gg 177 (329)
T 3tej_A 101 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIIGIQSPRPNGPMQTAANLDEVCEAHLATLLEQQ---PHGPYYLLGYSLGG 177 (329)
T ss_dssp SCEEEEECCTTSCCGGGGGGGGTSCTTCEEEEECCCTTTSHHHHCSSHHHHHHHHHHHHHHHC---SSSCEEEEEETHHH
T ss_pred CCcEEEEeCCcccchHHHHHHHhcCCCCeEEEeeCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEEccCH
Confidence 78999999999999999999999998999999999999976 68888888887777643 23489999999999
Q ss_pred HHHHHHHHh---CCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHH
Q 004396 254 CLALAVAAR---NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (756)
Q Consensus 254 ~vAl~~A~~---~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (756)
.+|..+|.+ +|+.+.++|++++....... +... ....+...........
T Consensus 178 ~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~------------------------- 229 (329)
T 3tej_A 178 TLAQGIAARLRARGEQVAFLGLLDTWPPETQN-WQEK--EANGLDPEVLAEINRE------------------------- 229 (329)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESCCCTHHHH-TC-------CCCCTHHHHHHHH-------------------------
T ss_pred HHHHHHHHHHHhcCCcccEEEEeCCCCCCccc-cccc--cccccChhhHHHHHHH-------------------------
Confidence 999999999 99999999999986532100 0000 0000000000000000
Q ss_pred HHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHH-hhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCe
Q 004396 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA-NSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC 409 (756)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~ 409 (756)
...+.. ..........+......+....... ......+.+|++++.|++|...+.+. ...+.+..+++
T Consensus 230 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~-~~~w~~~~~~~ 298 (329)
T 3tej_A 230 REAFLA----------AQQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSP-ERAWSPWIAEL 298 (329)
T ss_dssp HHHHHH----------TTCCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCH-HHHHTTTEEEE
T ss_pred HHHHHH----------hccccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCc-hhhHHHhcCCc
Confidence 000000 0000001111111111111111111 12345678999999999998887763 66667777889
Q ss_pred EEEEEcCCCCcccccch--hhHHHHhhh
Q 004396 410 IVRNFKDNGHTLLLEEG--ISLLTIIKG 435 (756)
Q Consensus 410 ~l~~i~~aGH~~~~e~p--~~~~~~I~~ 435 (756)
+++.++ +||+.+++.| +.+++.|.+
T Consensus 299 ~~~~v~-g~H~~~~~~~~~~~ia~~l~~ 325 (329)
T 3tej_A 299 DIYRQD-CAHVDIISPGTFEKIGPIIRA 325 (329)
T ss_dssp EEEEES-SCGGGGGSTTTHHHHHHHHHH
T ss_pred EEEEec-CChHHhCCChHHHHHHHHHHH
Confidence 999998 7999998887 678877763
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-15 Score=164.59 Aligned_cols=211 Identities=18% Similarity=0.055 Sum_probs=132.8
Q ss_pred CCCEEEEECCCCC---chh--hHHHhHhhhc--CCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhcc------CCCC-C
Q 004396 178 GSPTLLFLPGIDG---LGL--GLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS------SPEK-P 243 (756)
Q Consensus 178 ~~p~lV~lHG~~~---s~~--~~~~~~~~L~--~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~------~~~~-~ 243 (756)
..|+||++||.+. +.. .|..++..|+ .+|.|+++|+||++.+.+....+|+.+.++.+... .... +
T Consensus 112 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~ 191 (351)
T 2zsh_A 112 IVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRSWLKSKKDSKVH 191 (351)
T ss_dssp SCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHTCGGGCCTTTSSCE
T ss_pred CceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCCCCchhHHHHHHHHHHHHhCchhhcCCCCCCc
Confidence 4689999999543 333 3888888885 68999999999999998877788888777776542 2245 8
Q ss_pred EEEEEeChhhHHHHHHHHhCCC---cceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHh
Q 004396 244 IYLVGDSFGGCLALAVAARNPT---IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVN 320 (756)
Q Consensus 244 v~LvGhS~GG~vAl~~A~~~P~---~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (756)
++|+||||||.+|+.+|.++|+ +++++|+++|........ ........ .+
T Consensus 192 i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~----~~~~~~~~----------------~~------- 244 (351)
T 2zsh_A 192 IFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERT----ESEKSLDG----------------KY------- 244 (351)
T ss_dssp EEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCC----HHHHHHTT----------------TS-------
T ss_pred EEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCC----hhhhhcCC----------------Cc-------
Confidence 9999999999999999999988 899999999876432110 00000000 00
Q ss_pred hhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCC-cEEEEEeCCCCCCCCHH-H
Q 004396 321 IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKA-EVLVLASGKDNMLPSED-E 398 (756)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLvI~G~~D~~vp~~~-~ 398 (756)
.... .....++..+. +.... ...+.... + ......+.++++ |+|+++|++|.+++... .
T Consensus 245 ---~~~~-~~~~~~~~~~~---~~~~~--~~~~~~~~------~----~~~~~~l~~i~~pP~Lii~G~~D~~~~~~~~~ 305 (351)
T 2zsh_A 245 ---FVTV-RDRDWYWKAFL---PEGED--REHPACNP------F----SPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAY 305 (351)
T ss_dssp ---SCCH-HHHHHHHHHHS---CTTCC--TTSTTTCT------T----STTSCCCTTCCCCEEEEEEETTSTTHHHHHHH
T ss_pred ---ccCH-HHHHHHHHHhC---CCCCC--CCCcccCC------C----CCCccchhhCCCCCEEEEEcCCCcchHHHHHH
Confidence 0000 00000000000 00000 00000000 0 000145666777 99999999999886221 1
Q ss_pred HHHHHHhCCCeEEEEEcCCCCcccc----cchhhHHHHhh
Q 004396 399 AKRLNNSLQNCIVRNFKDNGHTLLL----EEGISLLTIIK 434 (756)
Q Consensus 399 ~~~l~~~l~~~~l~~i~~aGH~~~~----e~p~~~~~~I~ 434 (756)
.+.+.+...++++++++++||..+. ++++++.+.|.
T Consensus 306 ~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~ 345 (351)
T 2zsh_A 306 AEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEIS 345 (351)
T ss_dssp HHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHH
Confidence 2333334448999999999999887 77888887776
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.64 E-value=3.2e-15 Score=159.72 Aligned_cols=101 Identities=19% Similarity=0.118 Sum_probs=83.3
Q ss_pred CCCEEEEECC---CCCchhhHHHhHhhhcC--CcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccC----CCCCEEEEE
Q 004396 178 GSPTLLFLPG---IDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASS----PEKPIYLVG 248 (756)
Q Consensus 178 ~~p~lV~lHG---~~~s~~~~~~~~~~L~~--gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~----~~~~v~LvG 248 (756)
..|+||++|| +.++...|..++..|++ +|.|+++|+||+|.+.+....+|+.+.++.+.... ...+++|+|
T Consensus 89 ~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G 168 (323)
T 3ain_A 89 PYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYGIAVGG 168 (323)
T ss_dssp CCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEE
T ss_pred CCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCCCcchHHHHHHHHHHHHHhHHHhCCCceEEEEe
Confidence 4789999999 55888889999999964 89999999999999987766677666666553321 345899999
Q ss_pred eChhhHHHHHHHHhCCCcc---eEEEEeCCCCc
Q 004396 249 DSFGGCLALAVAARNPTID---LILILSNPATS 278 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P~~v---~~lVLi~p~~~ 278 (756)
|||||.+|+.+|.++|+.. .++|+++|...
T Consensus 169 ~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~ 201 (323)
T 3ain_A 169 DSAGGNLAAVTAILSKKENIKLKYQVLIYPAVS 201 (323)
T ss_dssp ETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCS
T ss_pred cCchHHHHHHHHHHhhhcCCCceeEEEEecccc
Confidence 9999999999999888766 89999998764
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=5.1e-16 Score=172.35 Aligned_cols=98 Identities=21% Similarity=0.205 Sum_probs=72.5
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCC--h-hHHHHHHHHHHHHhhccC--CCCCEEEEEeCh
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP--F-EGLVKFVEETVRREHASS--PEKPIYLVGDSF 251 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss--~-~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~ 251 (756)
..|+||++||.+++...+ .+..| ++||.|+++|++|+|.+. . ....+|+.+.++.+.... ...+++|+||||
T Consensus 157 ~~P~Vv~~hG~~~~~~~~--~a~~La~~Gy~V~a~D~rG~g~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~ 234 (422)
T 3k2i_A 157 PFPGIIDIFGIGGGLLEY--RASLLAGHGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISL 234 (422)
T ss_dssp CBCEEEEECCTTCSCCCH--HHHHHHTTTCEEEEEECSSSTTSCSSCSCEETHHHHHHHHHHHTSTTBCCSSEEEEEETH
T ss_pred CcCEEEEEcCCCcchhHH--HHHHHHhCCCEEEEEccCCCCCCCCCcccCCHHHHHHHHHHHHhCcCcCCCCEEEEEECH
Confidence 378999999998774443 36677 678999999999998772 1 111333344444333221 235899999999
Q ss_pred hhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 252 GGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 252 GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
||.+|+.+|.++|+ ++++|++++...
T Consensus 235 GG~lAl~~a~~~p~-v~a~V~~~~~~~ 260 (422)
T 3k2i_A 235 GADICLSMASFLKN-VSATVSINGSGI 260 (422)
T ss_dssp HHHHHHHHHHHCSS-EEEEEEESCCSB
T ss_pred HHHHHHHHHhhCcC-ccEEEEEcCccc
Confidence 99999999999998 999999998763
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=4.3e-15 Score=175.62 Aligned_cols=212 Identities=13% Similarity=0.094 Sum_probs=140.5
Q ss_pred ccCCC-CCceeeeeccCCC-CCCCCCEEEEECCCCCch---hhHHH----hHhhh-cCCcEEEEeccCCCCCCCh-----
Q 004396 157 IKPDG-GPPRWFCPVDCGR-PLKGSPTLLFLPGIDGLG---LGLIL----HHKPL-GKAFEVRCLHIPVYDRTPF----- 221 (756)
Q Consensus 157 ~~~dg-~~~~~~~~~~~G~-~~~~~p~lV~lHG~~~s~---~~~~~----~~~~L-~~gy~Vi~~Dl~G~G~Ss~----- 221 (756)
...+| .......+.+.+. +.+..|+||++||.+++. ..|.. +++.| +++|.|+++|+||+|.+..
T Consensus 461 ~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~ 540 (706)
T 2z3z_A 461 MAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQV 540 (706)
T ss_dssp ECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHT
T ss_pred EcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccchhHHHH
Confidence 34466 4443333433331 122358999999977665 34554 46777 5789999999999998842
Q ss_pred ------hHHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhh
Q 004396 222 ------EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKA 293 (756)
Q Consensus 222 ------~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~ 293 (756)
....+|+.++++.+.... ...+++|+||||||.+|+.+|.++|++++++|+++|......
T Consensus 541 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~------------ 608 (706)
T 2z3z_A 541 IHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNR------------ 608 (706)
T ss_dssp TTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGG------------
T ss_pred HhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHH------------
Confidence 123477777777765331 134899999999999999999999999999999998653210
Q ss_pred chhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhh
Q 004396 294 MPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANS 373 (756)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (756)
...... ..+.+.+. .. .+.+ .. .....
T Consensus 609 ~~~~~~-------~~~~~~~~----------~~----~~~~------------------------------~~--~~~~~ 635 (706)
T 2z3z_A 609 YAIMYG-------ERYFDAPQ----------EN----PEGY------------------------------DA--ANLLK 635 (706)
T ss_dssp SBHHHH-------HHHHCCTT----------TC----HHHH------------------------------HH--HCGGG
T ss_pred HHhhhh-------hhhcCCcc----------cC----hhhh------------------------------hh--CCHhH
Confidence 000000 00000000 00 0000 00 00124
Q ss_pred hccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 374 RLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 374 ~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
.+.++++|+|+++|++|..++.+. ++++.+.++ ++++++++++||.++.++++.+.+.+.
T Consensus 636 ~~~~i~~P~lii~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 699 (706)
T 2z3z_A 636 RAGDLKGRLMLIHGAIDPVVVWQH-SLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETIT 699 (706)
T ss_dssp GGGGCCSEEEEEEETTCSSSCTHH-HHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHH
T ss_pred hHHhCCCCEEEEeeCCCCCCCHHH-HHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHH
Confidence 567889999999999999999995 888887775 459999999999999888888877776
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.6e-15 Score=159.73 Aligned_cols=99 Identities=15% Similarity=0.076 Sum_probs=84.6
Q ss_pred CCEEEEECCCCCchhh-HH-HhHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHH
Q 004396 179 SPTLLFLPGIDGLGLG-LI-LHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCL 255 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~-~~-~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~v 255 (756)
+++|||+||++++... |. .+.+.| ..+|+|+++|+||||.++.++.++++.++++.+....+.++++||||||||.+
T Consensus 31 ~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~~~~~~~l~~~i~~~~~~~g~~~v~lVGhS~GG~v 110 (317)
T 1tca_A 31 SKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLV 110 (317)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHH
T ss_pred CCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCcHHHHHHHHHHHHHHHHHHhCCCCEEEEEEChhhHH
Confidence 6789999999999987 98 888899 46899999999999999887777777777776654444569999999999999
Q ss_pred HHHHHHhCC---CcceEEEEeCCCC
Q 004396 256 ALAVAARNP---TIDLILILSNPAT 277 (756)
Q Consensus 256 Al~~A~~~P---~~v~~lVLi~p~~ 277 (756)
+..++..+| ++|+++|++++..
T Consensus 111 a~~~~~~~~~~~~~v~~lV~l~~~~ 135 (317)
T 1tca_A 111 AQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp HHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHcCccchhhhEEEEECCCC
Confidence 999988876 7899999999854
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.9e-15 Score=151.59 Aligned_cols=195 Identities=17% Similarity=0.128 Sum_probs=132.0
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhc-CC--cEEEEeccCCCCCC-------------------------ChhHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KA--FEVRCLHIPVYDRT-------------------------PFEGLVKFVE 229 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~g--y~Vi~~Dl~G~G~S-------------------------s~~~~a~dv~ 229 (756)
+.++|||+||++++...|..+++.|. .+ ++|+.+|.+++|.+ ++.++++++.
T Consensus 5 ~~~pvvliHG~~~~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l~ 84 (249)
T 3fle_A 5 KTTATLFLHGYGGSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWIK 84 (249)
T ss_dssp CCEEEEEECCTTCCGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHHH
Confidence 46789999999999999999999994 45 47999999888853 2345788888
Q ss_pred HHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCC-----cceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHh
Q 004396 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-----IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (756)
Q Consensus 230 ~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~-----~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (756)
++++.+...++.+++++|||||||.+++.+|.++|+ +|+++|+++++.......... +.. ..
T Consensus 85 ~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~--------~~~-----~~ 151 (249)
T 3fle_A 85 EVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNEN--------VNE-----II 151 (249)
T ss_dssp HHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSC--------TTT-----SC
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCC--------cch-----hh
Confidence 888888766666799999999999999999999874 799999998765321110000 000 00
Q ss_pred HhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEE
Q 004396 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (756)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLv 384 (756)
+. ..+.| ... ...+. .++. ....+++.++|+|.
T Consensus 152 -~~-~~g~p---------~~~------~~~~~-------------------------~l~~-----~~~~~p~~~~~vl~ 184 (249)
T 3fle_A 152 -VD-KQGKP---------SRM------NAAYR-------------------------QLLS-----LYKIYCGKEIEVLN 184 (249)
T ss_dssp -BC-TTCCB---------SSC------CHHHH-------------------------HTGG-----GHHHHTTTTCEEEE
T ss_pred -hc-ccCCC---------ccc------CHHHH-------------------------HHHH-----HHhhCCccCCeEEE
Confidence 00 00000 000 00000 0000 01445667899999
Q ss_pred EEeC------CCCCCCCHHHHHHHHHhCCC----eEEEEEcC--CCCcccccchhhHHHHhh
Q 004396 385 LASG------KDNMLPSEDEAKRLNNSLQN----CIVRNFKD--NGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 385 I~G~------~D~~vp~~~~~~~l~~~l~~----~~l~~i~~--aGH~~~~e~p~~~~~~I~ 434 (756)
|+|+ .|..||... ++.+...+++ .+.+.+.| +.|..+.+++ ++.+.|.
T Consensus 185 I~G~~~~~~~sDG~V~~~S-a~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~ 244 (249)
T 3fle_A 185 IYGDLEDGSHSDGRVSNSS-SQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEII 244 (249)
T ss_dssp EEEECCSSSCBSSSSBHHH-HHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHH
T ss_pred EeccCCCCCCCCCcccHHH-HHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHH
Confidence 9998 799999995 8777766653 35566655 8999999987 4555554
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-15 Score=156.34 Aligned_cols=197 Identities=12% Similarity=0.046 Sum_probs=130.7
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcCCcEE----EEeccCCCC------------------------CCChhHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEV----RCLHIPVYD------------------------RTPFEGLVKFVE 229 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~V----i~~Dl~G~G------------------------~Ss~~~~a~dv~ 229 (756)
++++|||+||++++...|..+++.|++.+.+ +++|..++| ..+++++++++.
T Consensus 2 ~~~pvvllHG~~~~~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 2 DQIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCCCEEEECCTTCCTTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCcchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 3567999999999999999999999654433 333322222 126788999998
Q ss_pred HHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCC-----cceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHh
Q 004396 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-----IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (756)
Q Consensus 230 ~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~-----~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (756)
++++.+...++.+++++|||||||.+++.+|.++|+ +++++|+++++...... .....
T Consensus 82 ~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~--------~~~~~--------- 144 (254)
T 3ds8_A 82 IAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDP--------NDNGM--------- 144 (254)
T ss_dssp HHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCH--------HHHCS---------
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccc--------ccccc---------
Confidence 888777665555699999999999999999999998 89999999985532110 00000
Q ss_pred HhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEE
Q 004396 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (756)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLv 384 (756)
.+.. ... +.. . ..+... ......+.. ++|++.
T Consensus 145 ---~~~~-----------~~~---------------------------p~~-~----~~~~~~-~~~~~~~~~-~~~vl~ 176 (254)
T 3ds8_A 145 ---DLSF-----------KKL---------------------------PNS-T----PQMDYF-IKNQTEVSP-DLEVLA 176 (254)
T ss_dssp ---CTTC-----------SSC---------------------------SSC-C----HHHHHH-HHTGGGSCT-TCEEEE
T ss_pred ---cccc-----------ccC---------------------------Ccc-h----HHHHHH-HHHHhhCCC-CcEEEE
Confidence 0000 000 000 0 000000 001133444 789999
Q ss_pred EEeC------CCCCCCCHHHHHHHHHhCCC----eEEEEEcC--CCCcccccchhhHHHHhhhccccccCc
Q 004396 385 LASG------KDNMLPSEDEAKRLNNSLQN----CIVRNFKD--NGHTLLLEEGISLLTIIKGTCKYRRSR 443 (756)
Q Consensus 385 I~G~------~D~~vp~~~~~~~l~~~l~~----~~l~~i~~--aGH~~~~e~p~~~~~~I~~~~f~rr~~ 443 (756)
|+|+ .|.++|... ++.+...+++ .+...+.+ ++|..+.++|+ +.+.|. .|+++..
T Consensus 177 I~G~~~~~~~~Dg~Vp~~s-s~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~--~fL~~~~ 243 (254)
T 3ds8_A 177 IAGELSEDNPTDGIVPTIS-SLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTY--WFLEKFK 243 (254)
T ss_dssp EEEESBTTBCBCSSSBHHH-HTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHH--HHHHTCC
T ss_pred EEecCCCCCCCCcEeeHHH-HHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHH--HHHHHhc
Confidence 9999 999999995 8888777764 45556665 77999999996 555555 4655543
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=9.6e-16 Score=171.34 Aligned_cols=98 Identities=23% Similarity=0.218 Sum_probs=73.1
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCChh---HHHHHHHHHHHHhhccC--CCCCEEEEEeCh
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFE---GLVKFVEETVRREHASS--PEKPIYLVGDSF 251 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~---~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~ 251 (756)
..|+||++||.++....+. +..| ++||.|+++|+||+|.+... .-.+|+.+.++.+.... ...+++|+||||
T Consensus 173 ~~P~Vv~lhG~~~~~~~~~--a~~La~~Gy~Vla~D~rG~~~~~~~~~~~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~ 250 (446)
T 3hlk_A 173 PFPGIVDMFGTGGGLLEYR--ASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISK 250 (446)
T ss_dssp CBCEEEEECCSSCSCCCHH--HHHHHTTTCEEEEECCSSSTTSCSCCSEEEHHHHHHHHHHHHTSTTBCCSSEEEEEETH
T ss_pred CCCEEEEECCCCcchhhHH--HHHHHhCCCEEEEeccCCCCCCCcchhhCCHHHHHHHHHHHHhCCCCCCCCEEEEEECH
Confidence 3689999999988654443 6677 57899999999999987311 11344444444443322 135899999999
Q ss_pred hhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 252 GGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 252 GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
||.+|+.+|.++|+ ++++|++++...
T Consensus 251 GG~lAl~~A~~~p~-v~a~V~~~~~~~ 276 (446)
T 3hlk_A 251 GGELCLSMASFLKG-ITAAVVINGSVA 276 (446)
T ss_dssp HHHHHHHHHHHCSC-EEEEEEESCCSB
T ss_pred HHHHHHHHHHhCCC-ceEEEEEcCccc
Confidence 99999999999998 899999988664
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.8e-15 Score=160.38 Aligned_cols=102 Identities=20% Similarity=0.164 Sum_probs=86.0
Q ss_pred CCCEEEEECC---CCCchhhHHHhHhhhcC--CcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccC-----CCCCEEEE
Q 004396 178 GSPTLLFLPG---IDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASS-----PEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG---~~~s~~~~~~~~~~L~~--gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~-----~~~~v~Lv 247 (756)
..|+||++|| ++++...|..++..|++ +|.|+++|+||+|.+++....+|+.++++.+.... ...+++|+
T Consensus 73 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~ 152 (310)
T 2hm7_A 73 PYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVG 152 (310)
T ss_dssp SEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEE
T ss_pred CCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCCCCccHHHHHHHHHHHHhhHHHhCCCcceEEEE
Confidence 4789999999 78888899999999943 89999999999999988888888888777664332 13589999
Q ss_pred EeChhhHHHHHHHHhCCC----cceEEEEeCCCCcC
Q 004396 248 GDSFGGCLALAVAARNPT----IDLILILSNPATSF 279 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~----~v~~lVLi~p~~~~ 279 (756)
||||||.+|+.+|.++|+ .++++|+++|....
T Consensus 153 G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~ 188 (310)
T 2hm7_A 153 GDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 188 (310)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCC
T ss_pred EECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCC
Confidence 999999999999998775 69999999997644
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.61 E-value=7.2e-15 Score=148.42 Aligned_cols=202 Identities=18% Similarity=0.156 Sum_probs=128.3
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~ 258 (756)
+++|+|+||++++...|..+.+.|.+ ++|+++|+||+|. .++++.+.++.+.. ..+++|+||||||.+|+.
T Consensus 17 ~~~l~~~hg~~~~~~~~~~~~~~l~~-~~v~~~d~~g~~~-----~~~~~~~~i~~~~~---~~~~~l~G~S~Gg~ia~~ 87 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGLMYQNLSSRLPS-YKLCAFDFIEEED-----RLDRYADLIQKLQP---EGPLTLFGYSAGCSLAFE 87 (230)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHCTT-EEEEEECCCCSTT-----HHHHHHHHHHHHCC---SSCEEEEEETHHHHHHHH
T ss_pred CCCEEEECCCCCchHHHHHHHHhcCC-CeEEEecCCCHHH-----HHHHHHHHHHHhCC---CCCeEEEEECHhHHHHHH
Confidence 67899999999999999999999987 9999999999874 55677777776543 347999999999999999
Q ss_pred HHHhCC---CcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHH
Q 004396 259 VAARNP---TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLS 335 (756)
Q Consensus 259 ~A~~~P---~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (756)
+|.+.+ +.+.++|++++........+... .....+..++.. ++ .... .....+.
T Consensus 88 ~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~---------~~~~~~~~~~~~---~~----------~~~~-~~~~~~~ 144 (230)
T 1jmk_C 88 AAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGR---------TVESDVEALMNV---NR----------DNEA-LNSEAVK 144 (230)
T ss_dssp HHHHHHHTTCCEEEEEEESCCEECCCC-----------------CCHHHHHHH---TT----------TCSG-GGSHHHH
T ss_pred HHHHHHHcCCCccEEEEECCCCCCcccccccc---------cHHHHHHHHHhc---Ch----------hhhh-hhhHHHH
Confidence 998754 67999999997543211100000 000000000000 00 0000 0000000
Q ss_pred hhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC-CeEEEEE
Q 004396 336 NNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNF 414 (756)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~-~~~l~~i 414 (756)
..+............ .......+++|+++++|++|..++.. ...+.+..+ +++++.+
T Consensus 145 -------------------~~~~~~~~~~~~~~~-~~~~~~~~~~P~l~i~g~~D~~~~~~--~~~w~~~~~~~~~~~~i 202 (230)
T 1jmk_C 145 -------------------HGLKQKTHAFYSYYV-NLISTGQVKADIDLLTSGADFDIPEW--LASWEEATTGAYRMKRG 202 (230)
T ss_dssp -------------------HHHHHHHHHHHHHHH-HCCCCSCBSSEEEEEECSSCCCCCTT--EECSGGGBSSCEEEEEC
T ss_pred -------------------HHHHHHHHHHHHHhh-hccccccccccEEEEEeCCCCCCccc--cchHHHhcCCCeEEEEe
Confidence 000000001111000 01345788999999999999988743 444445543 6899999
Q ss_pred cCCCC--cccccchhhHHHHhhh
Q 004396 415 KDNGH--TLLLEEGISLLTIIKG 435 (756)
Q Consensus 415 ~~aGH--~~~~e~p~~~~~~I~~ 435 (756)
++ || ++..++++.+++.|.+
T Consensus 203 ~g-~H~~~~~~~~~~~~~~~i~~ 224 (230)
T 1jmk_C 203 FG-THAEMLQGETLDRNAGILLE 224 (230)
T ss_dssp SS-CGGGTTSHHHHHHHHHHHHH
T ss_pred cC-ChHHHcCcHhHHHHHHHHHH
Confidence 97 99 8888899999998873
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.60 E-value=5.3e-15 Score=175.77 Aligned_cols=213 Identities=16% Similarity=0.149 Sum_probs=142.5
Q ss_pred cccCCC-CCceeeeeccCCC-CCCCCCEEEEECCCCCch---hhHH-----HhHhhh-cCCcEEEEeccCCCCCCChh--
Q 004396 156 IIKPDG-GPPRWFCPVDCGR-PLKGSPTLLFLPGIDGLG---LGLI-----LHHKPL-GKAFEVRCLHIPVYDRTPFE-- 222 (756)
Q Consensus 156 ~~~~dg-~~~~~~~~~~~G~-~~~~~p~lV~lHG~~~s~---~~~~-----~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~-- 222 (756)
+...|| ..+....+.+.+. +.+..|+||++||.+++. ..|. .+++.| +.||.|+++|+||+|.|...
T Consensus 492 ~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~ 571 (741)
T 2ecf_A 492 LTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFG 571 (741)
T ss_dssp EECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHH
T ss_pred EEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhh
Confidence 345566 5544444433331 122468999999998764 3454 567777 67999999999999997421
Q ss_pred ---------HHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHH
Q 004396 223 ---------GLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPIL 291 (756)
Q Consensus 223 ---------~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~ 291 (756)
...+|+.++++.+.... ...+++++||||||.+++.+|.++|++++++|+++|......
T Consensus 572 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~---------- 641 (741)
T 2ecf_A 572 GALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGL---------- 641 (741)
T ss_dssp HTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGG----------
T ss_pred HHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhh----------
Confidence 23677777777765432 235899999999999999999999999999999998653210
Q ss_pred hhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHH
Q 004396 292 KAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA 371 (756)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (756)
...... ....+.+. .....+ . . ...
T Consensus 642 --~~~~~~-------~~~~~~~~--------------~~~~~~-~-----------------------------~--~~~ 666 (741)
T 2ecf_A 642 --YDSHYT-------ERYMDLPA--------------RNDAGY-R-----------------------------E--ARV 666 (741)
T ss_dssp --SBHHHH-------HHHHCCTG--------------GGHHHH-H-----------------------------H--HCS
T ss_pred --hccccc-------hhhcCCcc--------------cChhhh-h-----------------------------h--cCH
Confidence 000000 00000000 000000 0 0 000
Q ss_pred hhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 372 NSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 372 ~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
...+.++++|+|+++|++|..++.+. ++.+.+.++ .+++++++++||.++.+.++++.+.+.
T Consensus 667 ~~~~~~i~~P~lii~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~ 732 (741)
T 2ecf_A 667 LTHIEGLRSPLLLIHGMADDNVLFTN-STSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAE 732 (741)
T ss_dssp GGGGGGCCSCEEEEEETTCSSSCTHH-HHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred HHHHhhCCCCEEEEccCCCCCCCHHH-HHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHH
Confidence 14567889999999999999999995 888887765 359999999999999887766666665
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.3e-14 Score=170.22 Aligned_cols=203 Identities=16% Similarity=0.153 Sum_probs=129.7
Q ss_pred CCCCEEEEECCCCCchh--hHHHhHhhh-cCCcEEEEeccCC---CCCCC-------h-hHHHHHHHHHHHHhhcc--CC
Q 004396 177 KGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPV---YDRTP-------F-EGLVKFVEETVRREHAS--SP 240 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~gy~Vi~~Dl~G---~G~Ss-------~-~~~a~dv~~~i~~l~~~--~~ 240 (756)
+..|+||++||.+++.. .|...++.| ++||.|+++|+|| ||.+. + ....+|+.+.++.+... ..
T Consensus 422 ~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 501 (662)
T 3azo_A 422 ELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTAD 501 (662)
T ss_dssp CCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSC
T ss_pred CCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcC
Confidence 35789999999987665 677778888 6789999999999 77551 1 12244444444444333 23
Q ss_pred CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHh-hchhHHHHhHHhHhhhhcCChhHHHHH
Q 004396 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILK-AMPDELHCAVPYLLSYVMGDPIKMAMV 319 (756)
Q Consensus 241 ~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (756)
..+++|+||||||.+++.++.. |++++++|+++|..... .... ...... ..+.....+..
T Consensus 502 ~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~--------~~~~~~~~~~~----~~~~~~~~~~~------ 562 (662)
T 3azo_A 502 RARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLL--------GWADGGTHDFE----SRYLDFLIGSF------ 562 (662)
T ss_dssp TTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHH--------HHHTTCSCGGG----TTHHHHHTCCT------
T ss_pred hhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHH--------HHhcccccchh----hHhHHHHhCCC------
Confidence 4589999999999999998886 99999999998854211 0000 000000 00000000000
Q ss_pred hhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHH
Q 004396 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA 399 (756)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~ 399 (756)
+ +... .+.. ......+.++++|+|+++|++|.++|.+. +
T Consensus 563 ---------------------------------~-~~~~----~~~~--~sp~~~~~~~~~P~lii~G~~D~~vp~~~-~ 601 (662)
T 3azo_A 563 ---------------------------------E-EFPE----RYRD--RAPLTRADRVRVPFLLLQGLEDPVCPPEQ-C 601 (662)
T ss_dssp ---------------------------------T-TCHH----HHHH--TCGGGGGGGCCSCEEEEEETTCSSSCTHH-H
T ss_pred ---------------------------------c-cchh----HHHh--hChHhHhccCCCCEEEEeeCCCCCCCHHH-H
Confidence 0 0000 0000 00124567888999999999999999995 9
Q ss_pred HHHHHhCCCe----EEEEEcCCCCccc-ccchhhHHHHhhhcccccc
Q 004396 400 KRLNNSLQNC----IVRNFKDNGHTLL-LEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 400 ~~l~~~l~~~----~l~~i~~aGH~~~-~e~p~~~~~~I~~~~f~rr 441 (756)
+++.+.+++. ++++++++||.+. .+++.++.+.+. .|+.+
T Consensus 602 ~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~--~fl~~ 646 (662)
T 3azo_A 602 DRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAEL--SLYAQ 646 (662)
T ss_dssp HHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHH--HHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHH--HHHHH
Confidence 9999888754 9999999999874 345555555555 45443
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=2e-14 Score=147.11 Aligned_cols=191 Identities=16% Similarity=0.110 Sum_probs=127.5
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~ 258 (756)
+++|+|+||++++...|..+++.|..+++|+++|+||++ ++++++.+.++.+.. ..+++|+||||||.+|+.
T Consensus 22 ~~~l~~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~g~~-----~~~~~~~~~i~~~~~---~~~~~l~GhS~Gg~va~~ 93 (244)
T 2cb9_A 22 GKNLFCFPPISGFGIYFKDLALQLNHKAAVYGFHFIEED-----SRIEQYVSRITEIQP---EGPYVLLGYSAGGNLAFE 93 (244)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHTTTTSEEEEECCCCST-----THHHHHHHHHHHHCS---SSCEEEEEETHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHhCCCceEEEEcCCCHH-----HHHHHHHHHHHHhCC---CCCEEEEEECHhHHHHHH
Confidence 678999999999999999999999889999999999985 467777777777532 348999999999999999
Q ss_pred HHHhC---CCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHH
Q 004396 259 VAARN---PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLS 335 (756)
Q Consensus 259 ~A~~~---P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (756)
+|.+. ++.+.++|++++..... .+... .. ...+.. +. .+ .....+.
T Consensus 94 ~a~~~~~~~~~v~~lvl~~~~~~~~--~~~~~-------~~--~~~~~~----~~-~~---------------~~~~~~~ 142 (244)
T 2cb9_A 94 VVQAMEQKGLEVSDFIIVDAYKKDQ--SITAD-------TE--NDDSAA----YL-PE---------------AVRETVM 142 (244)
T ss_dssp HHHHHHHTTCCEEEEEEESCCCCCS--CCCCC----------------C----CS-CH---------------HHHHHHT
T ss_pred HHHHHHHcCCCccEEEEEcCCCCcc--ccccc-------cc--HHHHHH----Hh-HH---------------HHHHHHH
Confidence 99875 57899999999865311 11000 00 000000 00 00 0000000
Q ss_pred hhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeC--CCCCCCCHHHHHHHHHhCC-CeEEE
Q 004396 336 NNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG--KDNMLPSEDEAKRLNNSLQ-NCIVR 412 (756)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~--~D~~vp~~~~~~~l~~~l~-~~~l~ 412 (756)
. ....+..... ....+..+++|+++++|+ +|.. +++ ....+.+..+ +++++
T Consensus 143 ~-----------------------~~~~~~~~~~-~~~~~~~i~~Pvl~i~g~~~~D~~-~~~-~~~~w~~~~~~~~~~~ 196 (244)
T 2cb9_A 143 Q-----------------------KKRCYQEYWA-QLINEGRIKSNIHFIEAGIQTETS-GAM-VLQKWQDAAEEGYAEY 196 (244)
T ss_dssp H-----------------------HHHHHHHHHH-HCCCCSCBSSEEEEEECSBCSCCC-HHH-HTTSSGGGBSSCEEEE
T ss_pred H-----------------------HHHHHHHHHH-hhccCCCcCCCEEEEEccCccccc-ccc-chhHHHHhcCCCCEEE
Confidence 0 0000000000 013457889999999999 8874 333 2444555554 78999
Q ss_pred EEcCCCC--cccccchhhHHHHhhh
Q 004396 413 NFKDNGH--TLLLEEGISLLTIIKG 435 (756)
Q Consensus 413 ~i~~aGH--~~~~e~p~~~~~~I~~ 435 (756)
.+++ || ++..++++.+++.|.+
T Consensus 197 ~i~g-gH~~~~~~~~~~~~~~~i~~ 220 (244)
T 2cb9_A 197 TGYG-AHKDMLEGEFAEKNANIILN 220 (244)
T ss_dssp ECSS-BGGGTTSHHHHHHHHHHHHH
T ss_pred EecC-ChHHHcChHHHHHHHHHHHH
Confidence 9996 99 7777889999999874
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=4.1e-15 Score=157.93 Aligned_cols=102 Identities=21% Similarity=0.165 Sum_probs=80.8
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhhc--CCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhcc-----CCCCCEEEE
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-----SPEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~-----~~~~~v~Lv 247 (756)
+.|+||++||.+ ++...|..+...|+ .+|.|+++|+||+|.+++....+|+.++++.+... ....+++|+
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~ 157 (311)
T 1jji_A 78 DSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVG 157 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhHHHhCCCchhEEEE
Confidence 478999999998 88888998888885 58999999999999997655555555444443221 112379999
Q ss_pred EeChhhHHHHHHHHhCCCc----ceEEEEeCCCCcC
Q 004396 248 GDSFGGCLALAVAARNPTI----DLILILSNPATSF 279 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~~----v~~lVLi~p~~~~ 279 (756)
|||+||.+|+.+|.++|+. ++++|+++|....
T Consensus 158 G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (311)
T 1jji_A 158 GDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNF 193 (311)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCS
T ss_pred EeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCC
Confidence 9999999999999887765 9999999997643
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1e-14 Score=155.54 Aligned_cols=102 Identities=22% Similarity=0.177 Sum_probs=82.4
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhhc--CCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhcc-----CCCCCEEEE
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-----SPEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~-----~~~~~v~Lv 247 (756)
..|+||++||.+ ++...|..++..|. .||.|+++|+||+|.+++....+|+.++++.+... ....+++|+
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~ 157 (323)
T 1lzl_A 78 PVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVG 157 (323)
T ss_dssp CEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCCCCchHHHHHHHHHHHHhhHHHcCCChhheEEE
Confidence 468999999998 88888888888884 38999999999999998776666766666654321 112489999
Q ss_pred EeChhhHHHHHHHHhCCC----cceEEEEeCCCCcC
Q 004396 248 GDSFGGCLALAVAARNPT----IDLILILSNPATSF 279 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~----~v~~lVLi~p~~~~ 279 (756)
||||||.+|+.+|.++|+ .++++|+++|....
T Consensus 158 G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (323)
T 1lzl_A 158 GQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDD 193 (323)
T ss_dssp EETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCT
T ss_pred ecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCC
Confidence 999999999999988765 49999999997643
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.57 E-value=2e-14 Score=146.33 Aligned_cols=176 Identities=18% Similarity=0.200 Sum_probs=114.8
Q ss_pred CCCEEEEECCCCCchhhHHH----hHhhhcC-CcEEEEeccC---------------------CCCCC------------
Q 004396 178 GSPTLLFLPGIDGLGLGLIL----HHKPLGK-AFEVRCLHIP---------------------VYDRT------------ 219 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~----~~~~L~~-gy~Vi~~Dl~---------------------G~G~S------------ 219 (756)
..|+|||+||++++...|.. +.+.|.+ +|+|+++|+| |+|.+
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~~ 83 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISHE 83 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGGG
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcch
Confidence 46899999999999998874 4556644 8999999999 55654
Q ss_pred -ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCC------CcceEEEEeCCCCcCCcCCcCCchhHHh
Q 004396 220 -PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP------TIDLILILSNPATSFGRSQLQPLFPILK 292 (756)
Q Consensus 220 -s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P------~~v~~lVLi~p~~~~~~~~~~~~~~~~~ 292 (756)
++++.++.+.+.++.. ..+++|+||||||.+|+.+|.+++ ..++.++++++....... .
T Consensus 84 ~d~~~~~~~l~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~--~------- 149 (243)
T 1ycd_A 84 LDISEGLKSVVDHIKAN-----GPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPD--P------- 149 (243)
T ss_dssp CCCHHHHHHHHHHHHHH-----CCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEEC--T-------
T ss_pred hhHHHHHHHHHHHHHhc-----CCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcc--c-------
Confidence 3444455555554431 136899999999999999998753 245667776653321000 0
Q ss_pred hchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHh
Q 004396 293 AMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYAN 372 (756)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (756)
... .. . .+...+. + ..
T Consensus 150 ~~~----------------~~-----------~-------~~~~~~~---------------~---------------~~ 165 (243)
T 1ycd_A 150 EHP----------------GE-----------L-------RITEKFR---------------D---------------SF 165 (243)
T ss_dssp TST----------------TC-----------E-------EECGGGT---------------T---------------TT
T ss_pred ccc----------------cc-----------c-------ccchhHH---------------H---------------hc
Confidence 000 00 0 0000000 0 00
Q ss_pred hhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCe-------EEEEEcCCCCcccccchhhHHHHhh
Q 004396 373 SRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC-------IVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 373 ~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~-------~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
..+.++++|+|+++|++|.++|.+. ++.+.+.+++. ...+++++||++..+. .+.+.+.
T Consensus 166 ~~~~~~~~P~l~i~G~~D~~vp~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~~--~~~~~i~ 231 (243)
T 1ycd_A 166 AVKPDMKTKMIFIYGASDQAVPSVR-SKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNKK--DIIRPIV 231 (243)
T ss_dssp CCCTTCCCEEEEEEETTCSSSCHHH-HHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCCH--HHHHHHH
T ss_pred cCcccCCCCEEEEEeCCCCccCHHH-HHHHHHHhhhhccccccccEEEecCCCCcCCchH--HHHHHHH
Confidence 2346689999999999999999985 88888877653 6667888999987653 3444444
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-14 Score=154.14 Aligned_cols=100 Identities=18% Similarity=0.093 Sum_probs=84.4
Q ss_pred CCEEEEECCCC---CchhhHHHhHhhhcC--CcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccC-----CCCCEEEEE
Q 004396 179 SPTLLFLPGID---GLGLGLILHHKPLGK--AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASS-----PEKPIYLVG 248 (756)
Q Consensus 179 ~p~lV~lHG~~---~s~~~~~~~~~~L~~--gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~-----~~~~v~LvG 248 (756)
.|+||++||.+ ++...|..++..|++ +|.|+++|+|+.+..++....+|+.+.++.+.... ...+++|+|
T Consensus 87 ~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G 166 (326)
T 3ga7_A 87 QATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAG 166 (326)
T ss_dssp SCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEE
T ss_pred CcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCCCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEE
Confidence 59999999988 888889999999955 99999999999998888888888888777765431 235899999
Q ss_pred eChhhHHHHHHHHhCCCc------ceEEEEeCCCCc
Q 004396 249 DSFGGCLALAVAARNPTI------DLILILSNPATS 278 (756)
Q Consensus 249 hS~GG~vAl~~A~~~P~~------v~~lVLi~p~~~ 278 (756)
||+||.+|+.+|.++|+. ++++|+++|...
T Consensus 167 ~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~ 202 (326)
T 3ga7_A 167 DSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYG 202 (326)
T ss_dssp ETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCS
T ss_pred eCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccc
Confidence 999999999999887754 899999988653
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.56 E-value=4.5e-14 Score=145.73 Aligned_cols=172 Identities=15% Similarity=0.042 Sum_probs=108.6
Q ss_pred cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchh--hHHHhHhhh-cCCcEEEEeccCCCCCCC--------------
Q 004396 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP-------------- 220 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-------------- 220 (756)
..||..+.-+-+.+.+. ...|+||++||.+++.. .+..+++.| ++||.|+++|+||||.|.
T Consensus 37 ~~dG~~i~g~l~~P~~~--~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~ 114 (259)
T 4ao6_A 37 EVDGRTVPGVYWSPAEG--SSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDVVGL 114 (259)
T ss_dssp EETTEEEEEEEEEESSS--CCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CCGGGS
T ss_pred eeCCeEEEEEEEeCCCC--CCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchhhhh
Confidence 45665543233333333 23688999999988753 567788888 789999999999999771
Q ss_pred ------------hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch
Q 004396 221 ------------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF 288 (756)
Q Consensus 221 ------------~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~ 288 (756)
....+.|....++.+.......++.++|+||||.+++.+|+..|+ +.+.|+..+....
T Consensus 115 ~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~--------- 184 (259)
T 4ao6_A 115 DAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEG--------- 184 (259)
T ss_dssp TTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTS---------
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEecccccc---------
Confidence 122334555555555443345689999999999999999999875 4444443321100
Q ss_pred hHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHH
Q 004396 289 PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS 368 (756)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (756)
.. ..
T Consensus 185 -----~~-----------------------------------~~------------------------------------ 188 (259)
T 4ao6_A 185 -----VN-----------------------------------GE------------------------------------ 188 (259)
T ss_dssp -----TT-----------------------------------HH------------------------------------
T ss_pred -----cc-----------------------------------cc------------------------------------
Confidence 00 00
Q ss_pred HHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC--CeEEEEEcCCCCc
Q 004396 369 AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHT 420 (756)
Q Consensus 369 ~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~--~~~l~~i~~aGH~ 420 (756)
...+...+|++|+|+++|++|.++|++. ++.+.+.++ +.+++++++ +|.
T Consensus 189 -~~~~~a~~i~~P~Li~hG~~D~~vp~~~-~~~l~~al~~~~k~l~~~~G-~H~ 239 (259)
T 4ao6_A 189 -DLVRLAPQVTCPVRYLLQWDDELVSLQS-GLELFGKLGTKQKTLHVNPG-KHS 239 (259)
T ss_dssp -HHHHHGGGCCSCEEEEEETTCSSSCHHH-HHHHHHHCCCSSEEEEEESS-CTT
T ss_pred -chhhhhccCCCCEEEEecCCCCCCCHHH-HHHHHHHhCCCCeEEEEeCC-CCC
Confidence 0013346789999999999999999995 999999885 567888886 664
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.56 E-value=2.3e-14 Score=152.94 Aligned_cols=101 Identities=20% Similarity=0.254 Sum_probs=84.1
Q ss_pred CCE-EEEECCCC---CchhhHHHhHhhhcC--CcEEEEeccCCCCCCChhHHHHHHHHHHHHhhcc-CCCCCEEEEEeCh
Q 004396 179 SPT-LLFLPGID---GLGLGLILHHKPLGK--AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-SPEKPIYLVGDSF 251 (756)
Q Consensus 179 ~p~-lV~lHG~~---~s~~~~~~~~~~L~~--gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~-~~~~~v~LvGhS~ 251 (756)
.|+ ||++||.+ ++...|..++..|+. +|.|+++|+|+++.+++....+|+.+.++.+... ....+++|+|||+
T Consensus 79 ~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~ 158 (322)
T 3k6k_A 79 GAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYRALLKTAGSADRIIIAGDSA 158 (322)
T ss_dssp CSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHHSSGGGEEEEEETH
T ss_pred CCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCCCchHHHHHHHHHHHHHHcCCCCccEEEEecCc
Confidence 455 99999966 788889888888843 8999999999999998777777877777766544 3346899999999
Q ss_pred hhHHHHHHHHhCCCc----ceEEEEeCCCCcC
Q 004396 252 GGCLALAVAARNPTI----DLILILSNPATSF 279 (756)
Q Consensus 252 GG~vAl~~A~~~P~~----v~~lVLi~p~~~~ 279 (756)
||.+|+.+|.++|+. +.++|+++|....
T Consensus 159 GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 190 (322)
T 3k6k_A 159 GGGLTTASMLKAKEDGLPMPAGLVMLSPFVDL 190 (322)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSEEEEESCCCCT
T ss_pred cHHHHHHHHHHHHhcCCCCceEEEEecCCcCc
Confidence 999999999887765 9999999997754
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.55 E-value=5.4e-14 Score=149.85 Aligned_cols=198 Identities=15% Similarity=0.176 Sum_probs=131.4
Q ss_pred EEEEECC--CCCchhhHHHhHhhhcCCcEEEEeccCCCCCC----------ChhHHHHHHHHHHHHhhccCCCCCEEEEE
Q 004396 181 TLLFLPG--IDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT----------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (756)
Q Consensus 181 ~lV~lHG--~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S----------s~~~~a~dv~~~i~~l~~~~~~~~v~LvG 248 (756)
+++|+|| ++++...|..+...|..+++|+++|+||+|.+ +++++++++.+.++.+.. ..+++|+|
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~---~~p~~l~G 167 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAG---DAPVVLLG 167 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHT---TSCEEEEE
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcCCCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcC---CCCEEEEE
Confidence 8999998 67888899999999998999999999999976 488889998888877542 34899999
Q ss_pred eChhhHHHHHHHHhC----CCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcC
Q 004396 249 DSFGGCLALAVAARN----PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENR 324 (756)
Q Consensus 249 hS~GG~vAl~~A~~~----P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (756)
|||||.+|..+|.+. ++.++++|++++...... .....+ .. .++
T Consensus 168 ~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~-------~~~~~~---~~-~l~--------------------- 215 (319)
T 2hfk_A 168 HAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQ-------EPIEVW---SR-QLG--------------------- 215 (319)
T ss_dssp ETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSC-------HHHHHT---HH-HHH---------------------
T ss_pred ECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCch-------hHHHHH---HH-Hhh---------------------
Confidence 999999999999886 467999999998542210 000000 00 000
Q ss_pred CChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHH
Q 004396 325 LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (756)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~ 404 (756)
..+... ...+ .....+... ..+.... .......+++|+++++| +|..++.......+.+
T Consensus 216 -------~~~~~~--~~~~--------~~~~~~~~~-~~~~~~~--~~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~ 274 (319)
T 2hfk_A 216 -------EGLFAG--ELEP--------MSDARLLAM-GRYARFL--AGPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRA 274 (319)
T ss_dssp -------HHHHHT--CSSC--------CCHHHHHHH-HHHHHHH--HSCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSC
T ss_pred -------HHHHHh--hccc--------cchHHHHHH-HHHHHHH--HhCCCCCcCCCEEEEEc-CCCCCCccccccchhh
Confidence 000000 0000 000000000 0000000 01235788999999999 9998887620334444
Q ss_pred hCC-CeEEEEEcCCCCcccc-cchhhHHHHhhh
Q 004396 405 SLQ-NCIVRNFKDNGHTLLL-EEGISLLTIIKG 435 (756)
Q Consensus 405 ~l~-~~~l~~i~~aGH~~~~-e~p~~~~~~I~~ 435 (756)
..+ +.+++.++ +||+.++ ++++.+++.|.+
T Consensus 275 ~~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~ 306 (319)
T 2hfk_A 275 HWDLPHTVADVP-GDHFTMMRDHAPAVAEAVLS 306 (319)
T ss_dssp CCSSCSEEEEES-SCTTHHHHTCHHHHHHHHHH
T ss_pred cCCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHH
Confidence 444 57999999 6999755 899999999883
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-14 Score=157.10 Aligned_cols=102 Identities=19% Similarity=0.002 Sum_probs=77.9
Q ss_pred CCCEEEEECCCC---Cchh--hHHHhHhhhc-CCcEEEEeccCCC----CCCChhHHHHHHHHHHHHhhcc---CCCCCE
Q 004396 178 GSPTLLFLPGID---GLGL--GLILHHKPLG-KAFEVRCLHIPVY----DRTPFEGLVKFVEETVRREHAS---SPEKPI 244 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~--~~~~~~~~L~-~gy~Vi~~Dl~G~----G~Ss~~~~a~dv~~~i~~l~~~---~~~~~v 244 (756)
..|+||++||.+ ++.. .|..+...|+ .+|.|+++|+||+ +.+......+|+.+.++.+... .+..++
T Consensus 108 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~~~~~~~~~D~~~~~~~v~~~~~~~~~~~i 187 (361)
T 1jkm_A 108 VLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSGVEDCLAAVLWVDEHRESLGLSGV 187 (361)
T ss_dssp CEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCCCCCCccHHHHHHHHHHHHhhHHhcCCCeE
Confidence 468999999987 7777 8888888885 8999999999999 4444444444444444333221 122289
Q ss_pred EEEEeChhhHHHHHHHHh-----CCCcceEEEEeCCCCcC
Q 004396 245 YLVGDSFGGCLALAVAAR-----NPTIDLILILSNPATSF 279 (756)
Q Consensus 245 ~LvGhS~GG~vAl~~A~~-----~P~~v~~lVLi~p~~~~ 279 (756)
+|+|||+||.+++.+|.. +|+.++++|+++|....
T Consensus 188 ~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~ 227 (361)
T 1jkm_A 188 VVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 227 (361)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred EEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccc
Confidence 999999999999999988 88899999999987643
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.53 E-value=7.4e-14 Score=149.01 Aligned_cols=102 Identities=20% Similarity=0.137 Sum_probs=84.0
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhhc--CCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhcc-CCCCCEEEEEeCh
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-SPEKPIYLVGDSF 251 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~-~~~~~v~LvGhS~ 251 (756)
..|+||++||.+ ++...|..++..|. .+|.|+++|+|+.+...+....+|+.+.++.+... ....+++|+|||+
T Consensus 79 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~d~~ri~l~G~S~ 158 (322)
T 3fak_A 79 AGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSA 158 (322)
T ss_dssp TTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHTCCGGGEEEEEETH
T ss_pred CccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEEcCc
Confidence 479999999965 67778888888884 48999999999999888777777877777766543 3346899999999
Q ss_pred hhHHHHHHHHhCCCc----ceEEEEeCCCCcC
Q 004396 252 GGCLALAVAARNPTI----DLILILSNPATSF 279 (756)
Q Consensus 252 GG~vAl~~A~~~P~~----v~~lVLi~p~~~~ 279 (756)
||.+|+.+|.+.++. ++++|+++|....
T Consensus 159 GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~ 190 (322)
T 3fak_A 159 GGGLVLAVLVSARDQGLPMPASAIPISPWADM 190 (322)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSEEEEESCCCCT
T ss_pred CHHHHHHHHHHHHhcCCCCceEEEEECCEecC
Confidence 999999999887654 8999999997754
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.53 E-value=6.9e-14 Score=145.96 Aligned_cols=98 Identities=21% Similarity=0.148 Sum_probs=74.9
Q ss_pred CCEEEEECCCCCch---hhHHHhHhhhcC---CcEEEEeccCCCCCCC------hhHHHHHHHHHHHHhhccC-CCCCEE
Q 004396 179 SPTLLFLPGIDGLG---LGLILHHKPLGK---AFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASS-PEKPIY 245 (756)
Q Consensus 179 ~p~lV~lHG~~~s~---~~~~~~~~~L~~---gy~Vi~~Dl~G~G~Ss------~~~~a~dv~~~i~~l~~~~-~~~~v~ 245 (756)
.++|||+||++++. ..|..+.+.|++ +++|+++|+ |||.|+ ..++.+++.++++.+.... ..++++
T Consensus 5 ~~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 83 (279)
T 1ei9_A 5 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGYN 83 (279)
T ss_dssp SCCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCEE
T ss_pred CCcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhccCCEE
Confidence 45699999999888 789999999954 569999998 999762 1233444444444443211 114899
Q ss_pred EEEeChhhHHHHHHHHhCCCc-ceEEEEeCCCC
Q 004396 246 LVGDSFGGCLALAVAARNPTI-DLILILSNPAT 277 (756)
Q Consensus 246 LvGhS~GG~vAl~~A~~~P~~-v~~lVLi~p~~ 277 (756)
||||||||.+|..+|.++|+. |+++|+++++.
T Consensus 84 lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 84 AMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp EEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred EEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 999999999999999999984 99999998654
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.6e-14 Score=169.21 Aligned_cols=191 Identities=15% Similarity=0.084 Sum_probs=129.1
Q ss_pred CCCEEEEECCCCCch---hhHH--HhHhhhc-CCcEEEEeccCCCCCC-------Chh----HHHHHHHHHHHHhhccC-
Q 004396 178 GSPTLLFLPGIDGLG---LGLI--LHHKPLG-KAFEVRCLHIPVYDRT-------PFE----GLVKFVEETVRREHASS- 239 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~---~~~~--~~~~~L~-~gy~Vi~~Dl~G~G~S-------s~~----~~a~dv~~~i~~l~~~~- 239 (756)
..|+||++||.+++. ..|. .....|+ .||.|+++|+||+|.+ ... ...+|+.+.++.+....
T Consensus 495 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 574 (723)
T 1xfd_A 495 HYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQY 574 (723)
T ss_dssp CEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSS
T ss_pred ccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCC
Confidence 468999999998763 2332 3445564 7999999999999984 111 34567777777655432
Q ss_pred -CCCCEEEEEeChhhHHHHHHHHhC----CCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChh
Q 004396 240 -PEKPIYLVGDSFGGCLALAVAARN----PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPI 314 (756)
Q Consensus 240 -~~~~v~LvGhS~GG~vAl~~A~~~----P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (756)
...+++|+||||||.+|+.+|.++ |++++++|+++|...... . .... ... ..+.+.
T Consensus 575 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~-----~-------~~~~---~~~----~~~~~~ 635 (723)
T 1xfd_A 575 IDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKL-----Y-------ASAF---SER----YLGLHG 635 (723)
T ss_dssp EEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTS-----S-------BHHH---HHH----HHCCCS
T ss_pred cChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHH-----h-------hhhc---cHh----hcCCcc
Confidence 135799999999999999999999 999999999998653211 0 0000 000 000000
Q ss_pred HHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCC-CcEEEEEeCCCCCC
Q 004396 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVK-AEVLVLASGKDNML 393 (756)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~PvLvI~G~~D~~v 393 (756)
.. . .. +..... ...+.+++ +|+|+++|++|..+
T Consensus 636 ---------~~-~-----~~-----------------~~~~~~--------------~~~~~~~~~~P~lii~G~~D~~v 669 (723)
T 1xfd_A 636 ---------LD-N-----RA-----------------YEMTKV--------------AHRVSALEEQQFLIIHPTADEKI 669 (723)
T ss_dssp ---------SC-C-----SS-----------------TTTTCT--------------HHHHTSCCSCEEEEEEETTCSSS
T ss_pred ---------CC-h-----hH-----------------HHhcCh--------------hhHHhhcCCCCEEEEEeCCCCCc
Confidence 00 0 00 000000 13346788 79999999999999
Q ss_pred CCHHHHHHHHHhC----CCeEEEEEcCCCCcc-cccchhhHHHHhh
Q 004396 394 PSEDEAKRLNNSL----QNCIVRNFKDNGHTL-LLEEGISLLTIIK 434 (756)
Q Consensus 394 p~~~~~~~l~~~l----~~~~l~~i~~aGH~~-~~e~p~~~~~~I~ 434 (756)
|.+. ++.+.+.+ +++++++++++||.+ ..+.++.+.+.+.
T Consensus 670 ~~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 714 (723)
T 1xfd_A 670 HFQH-TAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSII 714 (723)
T ss_dssp CHHH-HHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHH
T ss_pred CHhH-HHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHH
Confidence 9985 87777766 467999999999998 6677777777776
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=7.6e-14 Score=144.79 Aligned_cols=99 Identities=15% Similarity=0.211 Sum_probs=77.9
Q ss_pred CCCEEEEECCCCCchhhHHHh---Hhhh-cCCcEEEEeccCCCCCCC------------------------------hhH
Q 004396 178 GSPTLLFLPGIDGLGLGLILH---HKPL-GKAFEVRCLHIPVYDRTP------------------------------FEG 223 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~---~~~L-~~gy~Vi~~Dl~G~G~Ss------------------------------~~~ 223 (756)
..|+||++||++++...|... .+.+ ..+|.|+++|++|+|.|. .+.
T Consensus 43 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 122 (278)
T 3e4d_A 43 PCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSY 122 (278)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccCCccccccCCcCcccchhhHHHH
Confidence 478999999999999988773 3333 348999999999999761 123
Q ss_pred HHHHHHHHHHHh-hccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 224 LVKFVEETVRRE-HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 224 ~a~dv~~~i~~l-~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
+++++..+++.. ... ..+++|+||||||.+|+.+|.++|+.++++++++|...
T Consensus 123 ~~~~~~~~~~~~~~~d--~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~ 176 (278)
T 3e4d_A 123 VTEELPALIGQHFRAD--MSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVA 176 (278)
T ss_dssp HHTHHHHHHHHHSCEE--EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSC
T ss_pred HHHHHHHHHHhhcCCC--cCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCccc
Confidence 345666666654 221 15899999999999999999999999999999998664
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.4e-13 Score=162.80 Aligned_cols=224 Identities=15% Similarity=0.118 Sum_probs=136.3
Q ss_pred cccCCCCCceeeeeccCC-CCCCCCCEEEEECCCCCchh--hHHHhHhhh-cCCcEEEEeccCCCCCCC-----------
Q 004396 156 IIKPDGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP----------- 220 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G-~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss----------- 220 (756)
+...||.......+.+.+ .+....|+||++||..+... .|......| ++||.|+++|+||+|.+.
T Consensus 422 ~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~ 501 (695)
T 2bkl_A 422 YASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDK 501 (695)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGG
T ss_pred EECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhc
Confidence 345566554333333333 11235799999999765544 455555555 789999999999988762
Q ss_pred hhHHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHH
Q 004396 221 FEGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDEL 298 (756)
Q Consensus 221 ~~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~ 298 (756)
.....+|+.++++.+.... ...++.++||||||.+++.+|.++|++++++|+.+|........ ..+ .
T Consensus 502 ~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~---------~~~--~ 570 (695)
T 2bkl_A 502 KQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYH---------LFG--S 570 (695)
T ss_dssp THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG---------GST--T
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhcc---------ccC--C
Confidence 2334567777777664332 23589999999999999999999999999999998865431100 000 0
Q ss_pred HHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCC
Q 004396 299 HCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAV 378 (756)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 378 (756)
. ..+.. ..+++ ..+ +..+ .+.... ....+.++
T Consensus 571 ~---~~~~~-~~g~~-----------~~~-----~~~~--------------------------~~~~~s--p~~~~~~~ 602 (695)
T 2bkl_A 571 G---RTWIP-EYGTA-----------EKP-----EDFK--------------------------TLHAYS--PYHHVRPD 602 (695)
T ss_dssp G---GGGHH-HHCCT-----------TSH-----HHHH--------------------------HHHHHC--GGGCCCSS
T ss_pred C---cchHH-HhCCC-----------CCH-----HHHH--------------------------HHHhcC--hHhhhhhc
Confidence 0 00000 00111 000 0000 000000 01334454
Q ss_pred C--CcEEEEEeCCCCCCCCHHHHHHHHHhCCC-------eEEEEEcCCCCccc--ccchhhHHHHhhhcccccc
Q 004396 379 K--AEVLVLASGKDNMLPSEDEAKRLNNSLQN-------CIVRNFKDNGHTLL--LEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 379 ~--~PvLvI~G~~D~~vp~~~~~~~l~~~l~~-------~~l~~i~~aGH~~~--~e~p~~~~~~I~~~~f~rr 441 (756)
+ .|+|+++|++|..+++.. ++++.+.++. +++++++++||... .++..+..+.+. .|+.+
T Consensus 603 ~~~~P~Li~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~--~fl~~ 673 (695)
T 2bkl_A 603 VRYPALLMMAADHDDRVDPMH-ARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLY--SFLFQ 673 (695)
T ss_dssp CCCCEEEEEEETTCSSSCTHH-HHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHH--HHHHH
T ss_pred CCCCCEEEEeeCCCCCCChHH-HHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHH--HHHHH
Confidence 4 699999999999999995 8888877644 79999999999973 333444433333 45544
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=7.1e-14 Score=165.57 Aligned_cols=193 Identities=17% Similarity=0.098 Sum_probs=130.7
Q ss_pred CCCEEEEECCCCCchh---hHH-HhHhhh--cCCcEEEEeccCCCCCCChh-----------HHHHHHHHHHHHhhccC-
Q 004396 178 GSPTLLFLPGIDGLGL---GLI-LHHKPL--GKAFEVRCLHIPVYDRTPFE-----------GLVKFVEETVRREHASS- 239 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~---~~~-~~~~~L--~~gy~Vi~~Dl~G~G~Ss~~-----------~~a~dv~~~i~~l~~~~- 239 (756)
..|+||++||.+++.. .|. .....| .+||.|+++|+||+|.+... ...+|+.++++.+....
T Consensus 495 ~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 574 (719)
T 1z68_A 495 KYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGF 574 (719)
T ss_dssp CEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSC
T ss_pred CccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCC
Confidence 4688999999988753 332 233444 57999999999999998522 45677777777765431
Q ss_pred -CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHH
Q 004396 240 -PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAM 318 (756)
Q Consensus 240 -~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (756)
...+++++||||||.+|+.+|.++|++++++|+++|...... . .... ... ..+.+.
T Consensus 575 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~-----~-------~~~~---~~~----~~g~~~---- 631 (719)
T 1z68_A 575 IDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEY-----Y-------ASVY---TER----FMGLPT---- 631 (719)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTT-----S-------BHHH---HHH----HHCCSS----
T ss_pred CCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHH-----h-------cccc---chh----hcCCcc----
Confidence 135899999999999999999999999999999998653211 0 0000 000 001110
Q ss_pred HhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCC-cEEEEEeCCCCCCCCHH
Q 004396 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKA-EVLVLASGKDNMLPSED 397 (756)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLvI~G~~D~~vp~~~ 397 (756)
.. .....+ . . ......+.++++ |+|+++|++|..++.+.
T Consensus 632 -----~~---~~~~~~-~-----------------------------~--~~~~~~~~~~~~~P~li~~G~~D~~v~~~~ 671 (719)
T 1z68_A 632 -----KD---DNLEHY-K-----------------------------N--STVMARAEYFRNVDYLLIHGTADDNVHFQN 671 (719)
T ss_dssp -----TT---TTHHHH-H-----------------------------H--TCSGGGGGGGTTSEEEEEEETTCSSSCTHH
T ss_pred -----cc---cchhhh-h-----------------------------h--CCHhHHHhcCCCCcEEEEEeCCCCCcCHHH
Confidence 00 000000 0 0 000134567777 89999999999999995
Q ss_pred HHHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 398 EAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 398 ~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
++++.+.++ .+++++++++||.+..+.++.+.+.+.
T Consensus 672 -~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 711 (719)
T 1z68_A 672 -SAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMT 711 (719)
T ss_dssp -HHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHH
Confidence 888877664 468999999999997777777777766
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.51 E-value=6e-14 Score=167.07 Aligned_cols=218 Identities=16% Similarity=0.073 Sum_probs=137.9
Q ss_pred cCCCCCceeeeeccCC-CCCCCCCEEEEECCCCCch---hhHH-HhHhhh--cCCcEEEEeccCCCCCCCh---------
Q 004396 158 KPDGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLG---LGLI-LHHKPL--GKAFEVRCLHIPVYDRTPF--------- 221 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G-~~~~~~p~lV~lHG~~~s~---~~~~-~~~~~L--~~gy~Vi~~Dl~G~G~Ss~--------- 221 (756)
..||..+....+.+.+ .+.+..|+||++||.+++. ..|. .....| .+||.|+++|+||+|.+..
T Consensus 480 ~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~ 559 (740)
T 4a5s_A 480 ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRR 559 (740)
T ss_dssp EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTC
T ss_pred ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhh
Confidence 4566554444444443 1223468999999997772 2222 122334 3799999999999997631
Q ss_pred --hHHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhH
Q 004396 222 --EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDE 297 (756)
Q Consensus 222 --~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~ 297 (756)
....+|+.++++.+.... ...++.|+||||||.+|+.+|.++|+.++++|+++|...... . ...
T Consensus 560 ~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~-----~-------~~~ 627 (740)
T 4a5s_A 560 LGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEY-----Y-------DSV 627 (740)
T ss_dssp TTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGG-----S-------BHH
T ss_pred hCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHH-----h-------hhH
Confidence 123667777777765321 125899999999999999999999999999999998653210 0 000
Q ss_pred HHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccC
Q 004396 298 LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA 377 (756)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 377 (756)
.. ...++.+ ......+.+.. ......+.+
T Consensus 628 ~~-------~~~~~~p------------~~~~~~~~~~~--------------------------------~~~~~~~~~ 656 (740)
T 4a5s_A 628 YT-------ERYMGLP------------TPEDNLDHYRN--------------------------------STVMSRAEN 656 (740)
T ss_dssp HH-------HHHHCCS------------STTTTHHHHHH--------------------------------SCSGGGGGG
T ss_pred HH-------HHHcCCC------------CccccHHHHHh--------------------------------CCHHHHHhc
Confidence 00 0000100 00000000000 000134556
Q ss_pred CCC-cEEEEEeCCCCCCCCHHHHHHHHHhCC----CeEEEEEcCCCCcc-cccchhhHHHHhhhcccccc
Q 004396 378 VKA-EVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTL-LLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 378 i~~-PvLvI~G~~D~~vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~-~~e~p~~~~~~I~~~~f~rr 441 (756)
+++ |+|+++|++|..++.+. ++++.+.++ ++++++++++||.+ ..+.++.+.+.+. .|+.+
T Consensus 657 i~~~P~Lii~G~~D~~v~~~~-~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~--~fl~~ 723 (740)
T 4a5s_A 657 FKQVEYLLIHGTADDNVHFQQ-SAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMS--HFIKQ 723 (740)
T ss_dssp GGGSEEEEEEETTCSSSCTHH-HHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHH--HHHHH
T ss_pred CCCCcEEEEEcCCCCccCHHH-HHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHH--HHHHH
Confidence 776 99999999999999995 887777663 56999999999998 5667777777766 45544
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.51 E-value=7.9e-14 Score=144.77 Aligned_cols=99 Identities=17% Similarity=0.217 Sum_probs=74.7
Q ss_pred CCCEEEEECCCCCchhhHHHh---Hhhh-cCCcEEEEecc--CCCCCCC----------------------------hhH
Q 004396 178 GSPTLLFLPGIDGLGLGLILH---HKPL-GKAFEVRCLHI--PVYDRTP----------------------------FEG 223 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~---~~~L-~~gy~Vi~~Dl--~G~G~Ss----------------------------~~~ 223 (756)
..|+||++||.+++...|... .+.+ ..+|.|+++|+ ||+|.+. ...
T Consensus 44 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 3fcx_A 44 KCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSY 123 (282)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCccccccccccccccCCcccccccCcccccchhhHHHH
Confidence 478999999999999888765 3555 67899999999 7665320 122
Q ss_pred HHHHHHHHHHH-hhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 224 LVKFVEETVRR-EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 224 ~a~dv~~~i~~-l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
.++++..+++. +..+ ..+++|+||||||.+|+.+|.++|+.++++|+++|...
T Consensus 124 ~~~~~~~~~~~~~~~d--~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (282)
T 3fcx_A 124 VTEELPQLINANFPVD--PQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICN 177 (282)
T ss_dssp HHTHHHHHHHHHSSEE--EEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCC
T ss_pred HHHHHHHHHHHHcCCC--ccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccC
Confidence 34455555552 2221 24899999999999999999999999999999998653
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.50 E-value=4.1e-14 Score=150.69 Aligned_cols=121 Identities=13% Similarity=0.086 Sum_probs=88.8
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCC---CchhhHHHhHhhhc--CCcEEEEeccCCCCCCChhHHHHHHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEE 230 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~---~s~~~~~~~~~~L~--~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~ 230 (756)
+...||..+....|.+.+. ..|+||++||.+ ++...|..++..|. .+|.|+++|+|+.+...+....+|+.+
T Consensus 65 i~~~~G~~i~~~~~~P~~~---~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~p~~~~D~~~ 141 (317)
T 3qh4_A 65 VTGEAGRPVPVRIYRAAPT---PAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAIE 141 (317)
T ss_dssp EECTTSCEEEEEEEECSCS---SEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHH
T ss_pred ecCCCCCeEEEEEEecCCC---CCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCchHHHHHHH
Confidence 3445553433223333332 478999999877 67777888888884 489999999999998877777777766
Q ss_pred HHHHhhcc-----CCCCCEEEEEeChhhHHHHHHHHhCCC----cceEEEEeCCCCcC
Q 004396 231 TVRREHAS-----SPEKPIYLVGDSFGGCLALAVAARNPT----IDLILILSNPATSF 279 (756)
Q Consensus 231 ~i~~l~~~-----~~~~~v~LvGhS~GG~vAl~~A~~~P~----~v~~lVLi~p~~~~ 279 (756)
.++.+... ....+++|+|||+||.+|+.+|.++++ .+.++++++|....
T Consensus 142 a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~ 199 (317)
T 3qh4_A 142 VLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDD 199 (317)
T ss_dssp HHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCS
T ss_pred HHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecC
Confidence 66655432 123489999999999999999987654 48999999997754
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-13 Score=151.38 Aligned_cols=157 Identities=11% Similarity=0.079 Sum_probs=115.5
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCC-----------------------------------h
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-----------------------------------F 221 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-----------------------------------~ 221 (756)
+.|+|||+||++++...|..+++.| +.||.|+++|+||+|.|. +
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 176 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQV 176 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHHHH
Confidence 4689999999999999999999999 678999999999998762 1
Q ss_pred hHHHHHHHHHHHHhhc----------------------cCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcC
Q 004396 222 EGLVKFVEETVRREHA----------------------SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (756)
Q Consensus 222 ~~~a~dv~~~i~~l~~----------------------~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~ 279 (756)
+..++|+..+++.+.. .....++.++||||||.+++.++...+ +++++|+++++...
T Consensus 177 ~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~~~p 255 (383)
T 3d59_A 177 RQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAWMFP 255 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCTT
T ss_pred HHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCccCC
Confidence 1224666676665532 111348999999999999999988775 59999999873310
Q ss_pred CcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHH
Q 004396 280 GRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLW 359 (756)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (756)
. .
T Consensus 256 -------~-------~---------------------------------------------------------------- 257 (383)
T 3d59_A 256 -------L-------G---------------------------------------------------------------- 257 (383)
T ss_dssp -------C-------C----------------------------------------------------------------
T ss_pred -------C-------c----------------------------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHH---hCCCeEEEEEcCCCCcccccchhh
Q 004396 360 KLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN---SLQNCIVRNFKDNGHTLLLEEGIS 428 (756)
Q Consensus 360 ~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~---~l~~~~l~~i~~aGH~~~~e~p~~ 428 (756)
.+.+.++++|+|+++|++|...+. .+.+.+ ....++++++++++|..+.+.+..
T Consensus 258 ------------~~~~~~i~~P~Lii~g~~D~~~~~---~~~~~~l~~~~~~~~~~~~~g~~H~~~~d~~~~ 314 (383)
T 3d59_A 258 ------------DEVYSRIPQPLFFINSEYFQYPAN---IIKMKKCYSPDKERKMITIRGSVHQNFADFTFA 314 (383)
T ss_dssp ------------GGGGGSCCSCEEEEEETTTCCHHH---HHHHHTTCCTTSCEEEEEETTCCGGGGSGGGGS
T ss_pred ------------hhhhccCCCCEEEEecccccchhh---HHHHHHHHhcCCceEEEEeCCCcCCCcccHhhh
Confidence 012256788999999999985422 333332 234789999999999988776543
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.5e-13 Score=161.69 Aligned_cols=223 Identities=15% Similarity=0.070 Sum_probs=127.6
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchh--hHHHhHhhh-cCCcEEEEeccCCCCCCC--h---------
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP--F--------- 221 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss--~--------- 221 (756)
+...||.......+.+.+. ....|+||++||.++... .|......| ++||.|+++|+||+|.+. +
T Consensus 466 ~~~~dg~~i~~~~~~p~~~-~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~ 544 (741)
T 1yr2_A 466 YPSKDGTKVPMFIVRRKDA-KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKK 544 (741)
T ss_dssp EECTTSCEEEEEEEEETTC-CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGT
T ss_pred EEcCCCCEEEEEEEecCCC-CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcC
Confidence 3455665533333333321 124799999999876654 344445555 789999999999999871 1
Q ss_pred hHHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHH
Q 004396 222 EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH 299 (756)
Q Consensus 222 ~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~ 299 (756)
....+|+.+.++.+.... ...++.++|||+||.+++.+|.++|++++++|+.+|........ ..+ ..
T Consensus 545 ~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~---------~~~--~~ 613 (741)
T 1yr2_A 545 QNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFD---------QFT--AG 613 (741)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGG---------GST--TG
T ss_pred CCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCcccccccc---------CCC--CC
Confidence 123456666666554331 23589999999999999999999999999999998865322100 000 00
Q ss_pred HhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccC-C
Q 004396 300 CAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA-V 378 (756)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i 378 (756)
..+.. ..+++ .. .+..+.+.... ....+.. +
T Consensus 614 ---~~~~~-~~g~~-----------~~-----~~~~~~~~~~s----------------------------p~~~~~~~~ 645 (741)
T 1yr2_A 614 ---RYWVD-DYGYP-----------EK-----EADWRVLRRYS----------------------------PYHNVRSGV 645 (741)
T ss_dssp ---GGGHH-HHCCT-----------TS-----HHHHHHHHTTC----------------------------GGGCCCTTS
T ss_pred ---chhHH-HcCCC-----------CC-----HHHHHHHHHcC----------------------------chhhhhccC
Confidence 00000 00111 00 00000000000 0134454 7
Q ss_pred CC-cEEEEEeCCCCCCCCHHHHHHHHHhCCC-------eEEEEEcCCCCcccccchh--hHHHHhhhcccccc
Q 004396 379 KA-EVLVLASGKDNMLPSEDEAKRLNNSLQN-------CIVRNFKDNGHTLLLEEGI--SLLTIIKGTCKYRR 441 (756)
Q Consensus 379 ~~-PvLvI~G~~D~~vp~~~~~~~l~~~l~~-------~~l~~i~~aGH~~~~e~p~--~~~~~I~~~~f~rr 441 (756)
++ |+|+++|++|..+++.. +.++.+.+++ +++++++++||....+..+ +..+.+. .|+.+
T Consensus 646 ~~~P~Li~~G~~D~~v~~~~-~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~--~fl~~ 715 (741)
T 1yr2_A 646 DYPAILVTTADTDDRVVPGH-SFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQ--AFLAH 715 (741)
T ss_dssp CCCEEEEEECSCCSSSCTHH-HHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHH--HHHHH
T ss_pred CCCCEEEEeeCCCCCCChhH-HHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHH--HHHHH
Confidence 75 99999999999999995 8888776654 7999999999997664332 3333333 45544
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=6.2e-13 Score=138.99 Aligned_cols=168 Identities=20% Similarity=0.238 Sum_probs=118.0
Q ss_pred CCCCEEEEECCCCCchhhHHHhHhhhc---CCcEEEEeccC------CCCCC----------C-------hhHHHHHHHH
Q 004396 177 KGSPTLLFLPGIDGLGLGLILHHKPLG---KAFEVRCLHIP------VYDRT----------P-------FEGLVKFVEE 230 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~---~gy~Vi~~Dl~------G~G~S----------s-------~~~~a~dv~~ 230 (756)
+..|+|||+||+|++...|..+.+.|. .++.+++++-| |.|.+ + +.+.++++.+
T Consensus 64 ~~~plVI~LHG~G~~~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (285)
T 4fhz_A 64 EATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARDLDA 143 (285)
T ss_dssp CCSEEEEEECCTTBCHHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHHHHH
Confidence 457899999999999999998888884 36778887643 44432 1 2233455566
Q ss_pred HHHHhhcc--CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhh
Q 004396 231 TVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSY 308 (756)
Q Consensus 231 ~i~~l~~~--~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (756)
+++.+... .+..+|+|+|+|+||.+|+.+|.++|+.+.++|.+++.... +.
T Consensus 144 ~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~---------------~~------------ 196 (285)
T 4fhz_A 144 FLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA---------------PE------------ 196 (285)
T ss_dssp HHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC---------------HH------------
T ss_pred HHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC---------------ch------------
Confidence 66554322 23458999999999999999999999999999998763210 00
Q ss_pred hcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeC
Q 004396 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG 388 (756)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~ 388 (756)
.. ......+.|++++||+
T Consensus 197 ------------------------~~--------------------------------------~~~~~~~~Pvl~~hG~ 214 (285)
T 4fhz_A 197 ------------------------RL--------------------------------------AEEARSKPPVLLVHGD 214 (285)
T ss_dssp ------------------------HH--------------------------------------HHHCCCCCCEEEEEET
T ss_pred ------------------------hh--------------------------------------hhhhhhcCcccceeeC
Confidence 00 0012346799999999
Q ss_pred CCCCCCCHHHHHHHHHhC----CCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 389 KDNMLPSEDEAKRLNNSL----QNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 389 ~D~~vp~~~~~~~l~~~l----~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
+|.++|.+. .+++.+.+ .+.+++++++.||.+..+.-+.+.+.|+
T Consensus 215 ~D~~Vp~~~-~~~~~~~L~~~g~~~~~~~y~g~gH~i~~~~l~~~~~fL~ 263 (285)
T 4fhz_A 215 ADPVVPFAD-MSLAGEALAEAGFTTYGHVMKGTGHGIAPDGLSVALAFLK 263 (285)
T ss_dssp TCSSSCTHH-HHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred CCCCcCHHH-HHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 999999995 77766655 3679999999999876544344443333
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=4.1e-13 Score=159.06 Aligned_cols=209 Identities=13% Similarity=0.055 Sum_probs=127.7
Q ss_pred cccCCCCCceeeeeccCCC-CCCCCCEEEEECCCCCchhh--HHHhHhhh-c-CCcEEEEeccCCCCCCC----------
Q 004396 156 IIKPDGGPPRWFCPVDCGR-PLKGSPTLLFLPGIDGLGLG--LILHHKPL-G-KAFEVRCLHIPVYDRTP---------- 220 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~-~~~~~p~lV~lHG~~~s~~~--~~~~~~~L-~-~gy~Vi~~Dl~G~G~Ss---------- 220 (756)
+...||..+..+.+.+.+. .....|+||++||.++.... |......| + +||.|+++|+||+|.+.
T Consensus 442 ~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~ 521 (710)
T 2xdw_A 442 YPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILA 521 (710)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGG
T ss_pred EEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhh
Confidence 3455676543333333331 12347999999998765543 33333344 6 89999999999999761
Q ss_pred -hhHHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhH
Q 004396 221 -FEGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDE 297 (756)
Q Consensus 221 -~~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~ 297 (756)
.....+|+.+.++.+.... ...+++++|||+||.+++.+|.++|++++++|+.+|.......... ....
T Consensus 522 ~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~-------~~~~- 593 (710)
T 2xdw_A 522 NKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKY-------TIGH- 593 (710)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS-------TTGG-
T ss_pred cCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhcccc-------CCCh-
Confidence 1123455555555554321 2358999999999999999999999999999999886532111000 0000
Q ss_pred HHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhcc-
Q 004396 298 LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH- 376 (756)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 376 (756)
.+.. ..+++ .. .+..+ .+.... ....+.
T Consensus 594 ------~~~~-~~g~~-----------~~-----~~~~~--------------------------~~~~~s--p~~~~~~ 622 (710)
T 2xdw_A 594 ------AWTT-DYGCS-----------DS-----KQHFE--------------------------WLIKYS--PLHNVKL 622 (710)
T ss_dssp ------GGHH-HHCCT-----------TS-----HHHHH--------------------------HHHHHC--GGGCCCC
T ss_pred ------hHHH-hCCCC-----------CC-----HHHHH--------------------------HHHHhC--cHhhhcc
Confidence 0000 00111 00 00000 000000 013344
Q ss_pred ----CCCC-cEEEEEeCCCCCCCCHHHHHHHHHhCCC-----------eEEEEEcCCCCccccc
Q 004396 377 ----AVKA-EVLVLASGKDNMLPSEDEAKRLNNSLQN-----------CIVRNFKDNGHTLLLE 424 (756)
Q Consensus 377 ----~i~~-PvLvI~G~~D~~vp~~~~~~~l~~~l~~-----------~~l~~i~~aGH~~~~e 424 (756)
++++ |+|+++|++|..+++.. +.++.+.+++ +++++++++||.....
T Consensus 623 ~~~~~~~~pP~Li~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 685 (710)
T 2xdw_A 623 PEADDIQYPSMLLLTADHDDRVVPLH-SLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKP 685 (710)
T ss_dssp CSSTTCCCCEEEEEEETTCCSSCTHH-HHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCC
T ss_pred cccccCCCCcEEEEEeCCCCccChhH-HHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCC
Confidence 6787 99999999999999995 8777766643 4899999999998653
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.8e-13 Score=142.24 Aligned_cols=100 Identities=17% Similarity=0.222 Sum_probs=76.1
Q ss_pred CCCCEEEEECCCCCchhhHHHh--H-hhh-cCCcEEEEeccCCCCCC----------------------------C-hhH
Q 004396 177 KGSPTLLFLPGIDGLGLGLILH--H-KPL-GKAFEVRCLHIPVYDRT----------------------------P-FEG 223 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~--~-~~L-~~gy~Vi~~Dl~G~G~S----------------------------s-~~~ 223 (756)
+..|+||++||++++...|... . ..+ ..++.|+++|.+++|.+ . .+.
T Consensus 45 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~ 124 (280)
T 3i6y_A 45 AKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDY 124 (280)
T ss_dssp CCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHH
T ss_pred CCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCcccccccccCccccccccCCCccchhhHHHH
Confidence 3578999999999998888764 3 333 45899999999866542 0 223
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 224 ~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
+++++..+++..... ..+++|+||||||.+|+.+|.++|+.++++|+++|...
T Consensus 125 ~~~~~~~~~~~~~~~--~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (280)
T 3i6y_A 125 VVNELPELIESMFPV--SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINN 177 (280)
T ss_dssp HHTHHHHHHHHHSSE--EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCC
T ss_pred HHHHHHHHHHHhCCC--CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccc
Confidence 456666666543221 25899999999999999999999999999999998653
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.7e-13 Score=138.14 Aligned_cols=102 Identities=19% Similarity=0.178 Sum_probs=82.1
Q ss_pred CCCCEEEEECCCCCchhhHHH--hHhhh-c-CCcEEEEeccCCCCCCC-------hhHHHHHHHHHHHHhhc--cCCCCC
Q 004396 177 KGSPTLLFLPGIDGLGLGLIL--HHKPL-G-KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHA--SSPEKP 243 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~--~~~~L-~-~gy~Vi~~Dl~G~G~Ss-------~~~~a~dv~~~i~~l~~--~~~~~~ 243 (756)
++.|+||++||++++...|.. .+..+ . .++.|+++|+++++.++ .+.+++++..+++.... .....+
T Consensus 39 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 118 (263)
T 2uz0_A 39 EDIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREK 118 (263)
T ss_dssp CCBCEEEEECCTTCCTTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGG
T ss_pred CCCCEEEEECCCCCCHHHHHhccCHHHHHhcCCeEEEEECCCCCccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCc
Confidence 357899999999999999988 56666 3 57888899998887662 55667788888877532 112358
Q ss_pred EEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcC
Q 004396 244 IYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (756)
Q Consensus 244 v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~ 279 (756)
++|+|||+||.+|+.+|. +|++++++|+++|....
T Consensus 119 i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~ 153 (263)
T 2uz0_A 119 TFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSF 153 (263)
T ss_dssp EEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCS
T ss_pred eEEEEEChHHHHHHHHHh-CccccceEEEecCCcch
Confidence 999999999999999999 99999999999987644
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.4e-12 Score=137.57 Aligned_cols=117 Identities=14% Similarity=0.108 Sum_probs=83.2
Q ss_pred CCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhH-HHhHhhh-cCCcEEEEeccC------------CC--CCCCh-
Q 004396 159 PDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGL-ILHHKPL-GKAFEVRCLHIP------------VY--DRTPF- 221 (756)
Q Consensus 159 ~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~-~~~~~~L-~~gy~Vi~~Dl~------------G~--G~Ss~- 221 (756)
.+|....++.|.+.+. .+..|+||++||++++...| ..+.+.+ ..+|.|+++|+| |+ |.|..
T Consensus 35 ~~~~~l~~~~~~P~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~ 113 (304)
T 3d0k_A 35 NADRPFTLNTYRPYGY-TPDRPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNP 113 (304)
T ss_dssp CTTCCEEEEEEECTTC-CTTSCEEEEECCTTCCHHHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSCB
T ss_pred CCCceEEEEEEeCCCC-CCCCcEEEEeCCCCCCHHHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccCCC
Confidence 4555655555555442 13579999999999999888 6667777 578999999999 66 66521
Q ss_pred ----hHHHHHHHHHHHHhhcc--CCCCCEEEEEeChhhHHHHHHHHhCCC-cceEEEEeCCC
Q 004396 222 ----EGLVKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPT-IDLILILSNPA 276 (756)
Q Consensus 222 ----~~~a~dv~~~i~~l~~~--~~~~~v~LvGhS~GG~vAl~~A~~~P~-~v~~lVLi~p~ 276 (756)
....+++.++++.+... ....+++|+||||||.+++.+|.++|+ .+.++|+.+++
T Consensus 114 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~ 175 (304)
T 3d0k_A 114 RHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPG 175 (304)
T ss_dssp CCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCS
T ss_pred CcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCc
Confidence 11223344444444322 234689999999999999999999995 78999988753
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.44 E-value=8.5e-13 Score=157.14 Aligned_cols=226 Identities=14% Similarity=0.095 Sum_probs=133.9
Q ss_pred cccCCCCCce-eeeeccCCC-CCCCCCEEEEECCCCCchh--hHHHhHhhh-cCCcEEEEeccCCCCCCC--h-------
Q 004396 156 IIKPDGGPPR-WFCPVDCGR-PLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP--F------- 221 (756)
Q Consensus 156 ~~~~dg~~~~-~~~~~~~G~-~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss--~------- 221 (756)
+...||..+. |+.+ +.+. +....|+||++||..+... .|......| ++||.|+++|+||+|.+. +
T Consensus 485 ~~s~dG~~i~~~l~~-p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~ 563 (751)
T 2xe4_A 485 ATAPDQTKIPLSVVY-HKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKY 563 (751)
T ss_dssp EECTTCCEEEEEEEE-ETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSG
T ss_pred EECCCCcEEEEEEEc-CCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhccccc
Confidence 3455775533 3332 2221 1234799999999876554 455556666 679999999999998641 1
Q ss_pred ---hHHHHHHHHHHHHhhcc--CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHh--hc
Q 004396 222 ---EGLVKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILK--AM 294 (756)
Q Consensus 222 ---~~~a~dv~~~i~~l~~~--~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~--~~ 294 (756)
....+|+.+.++.+... ....++.++|+|+||.+++.+|.++|++++++|+.+|..... .... ..
T Consensus 564 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~--------~~~~~~~~ 635 (751)
T 2xe4_A 564 LTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVM--------TTMCDPSI 635 (751)
T ss_dssp GGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHH--------HHHTCTTS
T ss_pred cccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHH--------hhhcccCc
Confidence 12345555555555433 123589999999999999999999999999999998854210 0000 00
Q ss_pred hhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhh
Q 004396 295 PDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSR 374 (756)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (756)
+.. ...+ ...+++ . ..+.. ..+... .....
T Consensus 636 ~~~----~~~~--~~~g~p---------------~-----------------------~~~~~----~~~~~~--sp~~~ 665 (751)
T 2xe4_A 636 PLT----TGEW--EEWGNP---------------N-----------------------EYKYY----DYMLSY--SPMDN 665 (751)
T ss_dssp TTH----HHHT--TTTCCT---------------T-----------------------SHHHH----HHHHHH--CTGGG
T ss_pred ccc----hhhH--HHcCCC---------------C-----------------------CHHHH----HHHHhc--Chhhh
Confidence 000 0000 000000 0 00000 000000 00245
Q ss_pred ccCCCCc-EEEEEeCCCCCCCCHHHHHHHHHhCCCe-------EEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 375 LHAVKAE-VLVLASGKDNMLPSEDEAKRLNNSLQNC-------IVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 375 l~~i~~P-vLvI~G~~D~~vp~~~~~~~l~~~l~~~-------~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
+.++++| +|+++|++|..+++.. +.++.+.++.. .+++++++||....+.++.+...-....|+.+
T Consensus 666 ~~~~~~Pp~Lii~G~~D~~vp~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~ 739 (751)
T 2xe4_A 666 VRAQEYPNIMVQCGLHDPRVAYWE-PAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCK 739 (751)
T ss_dssp CCSSCCCEEEEEEETTCSSSCTHH-HHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHH
T ss_pred hccCCCCceeEEeeCCCCCCCHHH-HHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHH
Confidence 6678897 9999999999999995 88887766422 35555999999886655544333222245443
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=5.6e-13 Score=144.81 Aligned_cols=102 Identities=17% Similarity=0.045 Sum_probs=82.4
Q ss_pred CCCEEEEECCCCC---ch--hhHHHhHhhh-cC-CcEEEEeccCCCCCCChhHHHHHHHHHHHHhhcc------CCCC-C
Q 004396 178 GSPTLLFLPGIDG---LG--LGLILHHKPL-GK-AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS------SPEK-P 243 (756)
Q Consensus 178 ~~p~lV~lHG~~~---s~--~~~~~~~~~L-~~-gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~------~~~~-~ 243 (756)
..|+||++||.+. +. ..|..++..| .+ +|.|+++|+|+.+...+....+|+.+.++.+... .... +
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~r 190 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQAR 190 (365)
T ss_dssp CCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHCTTTEETTTTEEE
T ss_pred cceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCCCCCCcHHHHHHHHHHHHHHhCchhhhCCCCCCc
Confidence 4789999999753 22 2377788888 33 8999999999998888888888988888887632 1234 8
Q ss_pred EEEEEeChhhHHHHHHHHhCCC---cceEEEEeCCCCcC
Q 004396 244 IYLVGDSFGGCLALAVAARNPT---IDLILILSNPATSF 279 (756)
Q Consensus 244 v~LvGhS~GG~vAl~~A~~~P~---~v~~lVLi~p~~~~ 279 (756)
++|+|||+||.+|+.+|.+.++ .++++|+++|....
T Consensus 191 i~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~ 229 (365)
T 3ebl_A 191 VFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGG 229 (365)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCC
T ss_pred EEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCC
Confidence 9999999999999999987665 79999999997643
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.44 E-value=9.7e-13 Score=143.72 Aligned_cols=174 Identities=18% Similarity=0.211 Sum_probs=116.3
Q ss_pred ccC-CCCCceeeeeccCC-CCCCCCCEEEEECCCCCchhhHH--Hh----Hhh-------hcCCcEEEEeccCCCCCCC-
Q 004396 157 IKP-DGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLGLGLI--LH----HKP-------LGKAFEVRCLHIPVYDRTP- 220 (756)
Q Consensus 157 ~~~-dg~~~~~~~~~~~G-~~~~~~p~lV~lHG~~~s~~~~~--~~----~~~-------L~~gy~Vi~~Dl~G~G~Ss- 220 (756)
... ||..+...-+.+.+ .+.+..|+||++||.+++...+. .+ ... ...++.|+++|.+|.+...
T Consensus 150 ~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~~~ 229 (380)
T 3doh_A 150 KDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWST 229 (380)
T ss_dssp ECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCSBT
T ss_pred ccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcccc
Confidence 344 66665555555554 22334689999999986643211 11 111 1356899999999765431
Q ss_pred -h---------hHHHHHHHHHHHHhhccCC--CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch
Q 004396 221 -F---------EGLVKFVEETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF 288 (756)
Q Consensus 221 -~---------~~~a~dv~~~i~~l~~~~~--~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~ 288 (756)
+ ....+++.++++.+....+ ..+++|+||||||.+|+.+|.++|+.++++|++++...
T Consensus 230 ~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~---------- 299 (380)
T 3doh_A 230 LFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGD---------- 299 (380)
T ss_dssp TTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC----------
T ss_pred cccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCC----------
Confidence 1 3334444444444433332 23799999999999999999999999999999998530
Q ss_pred hHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHH
Q 004396 289 PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS 368 (756)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (756)
+
T Consensus 300 ------------------------~------------------------------------------------------- 300 (380)
T 3doh_A 300 ------------------------V------------------------------------------------------- 300 (380)
T ss_dssp ------------------------G-------------------------------------------------------
T ss_pred ------------------------h-------------------------------------------------------
Confidence 0
Q ss_pred HHHhhhccCC-CCcEEEEEeCCCCCCCCHHHHHHHHHhCC----CeEEEEEcCC--------CCccccc
Q 004396 369 AYANSRLHAV-KAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDN--------GHTLLLE 424 (756)
Q Consensus 369 ~~~~~~l~~i-~~PvLvI~G~~D~~vp~~~~~~~l~~~l~----~~~l~~i~~a--------GH~~~~e 424 (756)
..+..+ .+|+|+++|++|..+|.+. ++.+.+.+. ++++++++++ ||....+
T Consensus 301 ----~~~~~~~~~P~lii~G~~D~~vp~~~-~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~~~ 364 (380)
T 3doh_A 301 ----SKVERIKDIPIWVFHAEDDPVVPVEN-SRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSWIP 364 (380)
T ss_dssp ----GGGGGGTTSCEEEEEETTCSSSCTHH-HHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTHHH
T ss_pred ----hhhhhccCCCEEEEecCCCCccCHHH-HHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhHHH
Confidence 111222 3799999999999999985 877777663 5899999999 7765443
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-12 Score=136.17 Aligned_cols=100 Identities=16% Similarity=0.218 Sum_probs=75.7
Q ss_pred CCCCEEEEECCCCCchhhHHH---hHhhh-cCCcEEEEeccCCCCCC----------------------------C-hhH
Q 004396 177 KGSPTLLFLPGIDGLGLGLIL---HHKPL-GKAFEVRCLHIPVYDRT----------------------------P-FEG 223 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~---~~~~L-~~gy~Vi~~Dl~G~G~S----------------------------s-~~~ 223 (756)
+..|+||++||++++...|.. ..+.+ ..++.|+++|.+++|.+ . .+.
T Consensus 43 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~ 122 (280)
T 3ls2_A 43 NKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDY 122 (280)
T ss_dssp BCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHH
T ss_pred CCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccCCccccccccccccccccHHHH
Confidence 347899999999999888865 33344 45899999998765532 1 233
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 224 ~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
+.+++..+++..... ..+++|+||||||.+|+.+|.++|+.++++++++|...
T Consensus 123 ~~~~~~~~i~~~~~~--~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 175 (280)
T 3ls2_A 123 VVNELPALIEQHFPV--TSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVN 175 (280)
T ss_dssp HHTHHHHHHHHHSSE--EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSC
T ss_pred HHHHHHHHHHhhCCC--CCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccC
Confidence 445666666654221 25899999999999999999999999999999998653
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=4.9e-13 Score=140.13 Aligned_cols=100 Identities=14% Similarity=0.044 Sum_probs=84.3
Q ss_pred CCCEEEEECCCCCch-hhHH-HhHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhH
Q 004396 178 GSPTLLFLPGIDGLG-LGLI-LHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGC 254 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~-~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~ 254 (756)
++++|||+||++++. ..|. .+.+.| .++|+|+++|+||||.++.+..++++.++++.+....+.++++||||||||.
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~~~~~~~la~~I~~l~~~~g~~~v~LVGHSmGGl 143 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLNDTQVNTEYMVNAITTLYAGSGNNKLPVLTWSQGGL 143 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHH
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCcHHHHHHHHHHHHHHHHHHhCCCceEEEEECHHHH
Confidence 367899999999998 6887 888999 5689999999999999987777777777777665444456999999999999
Q ss_pred HHHHHHHhC---CCcceEEEEeCCCC
Q 004396 255 LALAVAARN---PTIDLILILSNPAT 277 (756)
Q Consensus 255 vAl~~A~~~---P~~v~~lVLi~p~~ 277 (756)
++..++..+ +++|+++|++++..
T Consensus 144 vA~~al~~~p~~~~~V~~lV~lapp~ 169 (316)
T 3icv_A 144 VAQWGLTFFPSIRSKVDRLMAFAPDY 169 (316)
T ss_dssp HHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHhccccchhhceEEEECCCC
Confidence 998777765 58999999999866
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-12 Score=154.49 Aligned_cols=208 Identities=15% Similarity=0.111 Sum_probs=121.0
Q ss_pred ccCCCCCceeeeeccCC-CCCCCCCEEEEECCCCCchh--hHHHhHhhh-cCCcEEEEeccCCCCCCC-----------h
Q 004396 157 IKPDGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP-----------F 221 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G-~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-----------~ 221 (756)
...||..+....+.+.+ .+....|+||++||..+... .|......| ++||.|+++|+||+|... .
T Consensus 431 ~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~ 510 (693)
T 3iuj_A 431 QSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNK 510 (693)
T ss_dssp ECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGT
T ss_pred ecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcC
Confidence 44566543333333332 11235799999999765433 344444455 789999999999998762 1
Q ss_pred hHHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHH
Q 004396 222 EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH 299 (756)
Q Consensus 222 ~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~ 299 (756)
....+|+.+.++.+.... ...++.++|||+||.+++.++.++|++++++|+..|........ . ...
T Consensus 511 ~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~--------~-~~~--- 578 (693)
T 3iuj_A 511 QNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYH--------T-FTA--- 578 (693)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGG--------G-SGG---
T ss_pred CCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhc--------c-CCC---
Confidence 123455555555554331 23589999999999999999999999999999998865321100 0 000
Q ss_pred HhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccC-C
Q 004396 300 CAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA-V 378 (756)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i 378 (756)
...+. ...+++ .. .+... ..+..... ...+.+ +
T Consensus 579 --~~~~~-~~~g~p-----------~~----~~~~~--------------------------~~~~~~sp--~~~~~~~~ 612 (693)
T 3iuj_A 579 --GTGWA-YDYGTS-----------AD----SEAMF--------------------------DYLKGYSP--LHNVRPGV 612 (693)
T ss_dssp --GGGCH-HHHCCT-----------TS----CHHHH--------------------------HHHHHHCH--HHHCCTTC
T ss_pred --chhHH-HHcCCc-----------cC----HHHHH--------------------------HHHHhcCH--HHhhcccC
Confidence 00000 000111 00 00000 00100000 144566 7
Q ss_pred CCc-EEEEEeCCCCCCCCHHHHHHHHHhCC-------CeEEEEEcCCCCcccc
Q 004396 379 KAE-VLVLASGKDNMLPSEDEAKRLNNSLQ-------NCIVRNFKDNGHTLLL 423 (756)
Q Consensus 379 ~~P-vLvI~G~~D~~vp~~~~~~~l~~~l~-------~~~l~~i~~aGH~~~~ 423 (756)
++| +|+++|++|..+++.. +.++.+.++ .+++++++++||....
T Consensus 613 ~~Pp~Li~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~ 664 (693)
T 3iuj_A 613 SYPSTMVTTADHDDRVVPAH-SFKFAATLQADNAGPHPQLIRIETNAGHGAGT 664 (693)
T ss_dssp CCCEEEEEEESSCSSSCTHH-HHHHHHHHHHHCCSSSCEEEEEEC-------C
T ss_pred CCCceeEEecCCCCCCChhH-HHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcc
Confidence 897 9999999999999995 877777664 3589999999998764
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.7e-12 Score=142.70 Aligned_cols=99 Identities=12% Similarity=0.007 Sum_probs=68.6
Q ss_pred CCCEEEEECCCCCchhh-----------HHHhHhhh-cCCcEEEEeccCCCCCCC---------------hhHHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGLG-----------LILHHKPL-GKAFEVRCLHIPVYDRTP---------------FEGLVKFVEE 230 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~-----------~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss---------------~~~~a~dv~~ 230 (756)
+.|+||++||++++... |..++..| ++||.|+++|+||||.|+ +.+.++++..
T Consensus 78 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~ 157 (397)
T 3h2g_A 78 PYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARS 157 (397)
T ss_dssp CEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHH
Confidence 46899999999987664 45566777 789999999999999882 2233344444
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHHHHHHh-CC----C-cceEEEEeCCCC
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAAR-NP----T-IDLILILSNPAT 277 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~-~P----~-~v~~lVLi~p~~ 277 (756)
+++.++.. ...+++++||||||.+++.+|.. .+ + .+.+++..++..
T Consensus 158 ~~~~~~~~-~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~ 209 (397)
T 3h2g_A 158 VLQHLKTP-LSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPY 209 (397)
T ss_dssp HHHHHTCC-EEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCS
T ss_pred HHHhcCCC-CCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccc
Confidence 45444331 12489999999999999888732 22 1 466666665543
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.41 E-value=3.2e-12 Score=149.60 Aligned_cols=208 Identities=16% Similarity=0.030 Sum_probs=128.2
Q ss_pred cccCCCCCceeeeeccCCC-CCCCCCEEEEECCCCCchhh--HHHhH-hhh-cCCcEEEEeccCCCCCCC----------
Q 004396 156 IIKPDGGPPRWFCPVDCGR-PLKGSPTLLFLPGIDGLGLG--LILHH-KPL-GKAFEVRCLHIPVYDRTP---------- 220 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~-~~~~~p~lV~lHG~~~s~~~--~~~~~-~~L-~~gy~Vi~~Dl~G~G~Ss---------- 220 (756)
+...||..+..+-+.+.+. +....|+||++||.++.... |.... +.| ++||.|+++|+||+|.+.
T Consensus 454 ~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~ 533 (711)
T 4hvt_A 454 ATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGI 533 (711)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGG
T ss_pred EECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhc
Confidence 3456776543333333332 23458999999997554432 32222 344 789999999999998751
Q ss_pred -hhHHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhH
Q 004396 221 -FEGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDE 297 (756)
Q Consensus 221 -~~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~ 297 (756)
.....+|+.+.++.+.... ...++.++|+|+||.+++.++.++|++++++|+.+|........ . ...
T Consensus 534 ~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~--------~-~~~- 603 (711)
T 4hvt_A 534 KRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYK--------E-FGA- 603 (711)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG--------G-STT-
T ss_pred cCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhh--------c-ccc-
Confidence 2233455555555554332 23589999999999999999999999999999998865431100 0 000
Q ss_pred HHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccC
Q 004396 298 LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA 377 (756)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 377 (756)
...+... .+++ ..+ ...+ .+.... ....+.+
T Consensus 604 ----~~~~~~~-~G~p-----------~~~-----~~~~--------------------------~l~~~S--P~~~v~~ 634 (711)
T 4hvt_A 604 ----GHSWVTE-YGDP-----------EIP-----NDLL--------------------------HIKKYA--PLENLSL 634 (711)
T ss_dssp ----GGGGHHH-HCCT-----------TSH-----HHHH--------------------------HHHHHC--GGGSCCT
T ss_pred ----chHHHHH-hCCC-----------cCH-----HHHH--------------------------HHHHcC--HHHHHhh
Confidence 0000000 0111 000 0000 000000 0144566
Q ss_pred CCC--cEEEEEeCCCCCCCCHHHHHHHHHhC-----CCeEEEEEcCCCCcccc
Q 004396 378 VKA--EVLVLASGKDNMLPSEDEAKRLNNSL-----QNCIVRNFKDNGHTLLL 423 (756)
Q Consensus 378 i~~--PvLvI~G~~D~~vp~~~~~~~l~~~l-----~~~~l~~i~~aGH~~~~ 423 (756)
+++ |+|+++|++|..+++.. +.++.+.+ ..+++++++++||....
T Consensus 635 i~~~pPvLii~G~~D~~Vp~~~-s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~ 686 (711)
T 4hvt_A 635 TQKYPTVLITDSVLDQRVHPWH-GRIFEYVLAQNPNTKTYFLESKDSGHGSGS 686 (711)
T ss_dssp TSCCCEEEEEEETTCCSSCTHH-HHHHHHHHTTCTTCCEEEEEESSCCSSSCS
T ss_pred cCCCCCEEEEecCCCCcCChHH-HHHHHHHHHHHcCCCEEEEEECCCCCcCcC
Confidence 777 99999999999999995 88888777 35799999999998754
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=3.5e-12 Score=131.81 Aligned_cols=101 Identities=15% Similarity=0.121 Sum_probs=73.8
Q ss_pred CCCCEEEEECCCCCchhhHHHh-------Hhhh-c----CCcEEEEeccCCCCCCC---hhHH----HHHHHHHHHHh-h
Q 004396 177 KGSPTLLFLPGIDGLGLGLILH-------HKPL-G----KAFEVRCLHIPVYDRTP---FEGL----VKFVEETVRRE-H 236 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~-------~~~L-~----~gy~Vi~~Dl~G~G~Ss---~~~~----a~dv~~~i~~l-~ 236 (756)
+..|+||++||.+++...|... ++.| + .+|.|+++|+++++.+. +.++ ++++..+++.. .
T Consensus 60 ~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 139 (268)
T 1jjf_A 60 KKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYENFTKDLLNSLIPYIESNYS 139 (268)
T ss_dssp SCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCHHHHHHHHHHHTHHHHHHHHSC
T ss_pred CCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccccHHHHHHHHHHHHHHHHHhhcC
Confidence 3579999999999887666443 5566 3 35999999999987652 2233 44444444432 1
Q ss_pred ccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 237 ~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
......+++|+||||||.+|+.+|.++|+.++++++++|..
T Consensus 140 ~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~ 180 (268)
T 1jjf_A 140 VYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 180 (268)
T ss_dssp BCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred CCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCC
Confidence 11123589999999999999999999999999999999854
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=5.4e-13 Score=146.98 Aligned_cols=100 Identities=15% Similarity=0.202 Sum_probs=78.4
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCc---EEEEeccCCCCCC----------------------------------
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAF---EVRCLHIPVYDRT---------------------------------- 219 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy---~Vi~~Dl~G~G~S---------------------------------- 219 (756)
++++|||+||++++...|..+++.| .+|| +|+++|++|||.|
T Consensus 21 ~~ppVVLlHG~g~s~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v~~ 100 (484)
T 2zyr_A 21 DFRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKILS 100 (484)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccccccc
Confidence 4788999999999999999999999 5678 7999999999964
Q ss_pred -----ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCC---CcceEEEEeCCCC
Q 004396 220 -----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPAT 277 (756)
Q Consensus 220 -----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P---~~v~~lVLi~p~~ 277 (756)
+....++++.+.++.+....+.++++|+||||||.+++.+|.++| +.++++|+++++.
T Consensus 101 ~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~ 166 (484)
T 2zyr_A 101 KSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVW 166 (484)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCC
T ss_pred ccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCcc
Confidence 122233344433333332233358999999999999999999998 4899999999855
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.37 E-value=6.7e-12 Score=128.30 Aligned_cols=170 Identities=15% Similarity=0.148 Sum_probs=116.0
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhc---CCcEEEEeccCCC--------------CCC--------------ChhHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLG---KAFEVRCLHIPVY--------------DRT--------------PFEGLVK 226 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~---~gy~Vi~~Dl~G~--------------G~S--------------s~~~~a~ 226 (756)
.+++|||+||+|++...|..+.+.|. .++.+++++-|.. ... .+...++
T Consensus 36 ~~~~VI~LHG~G~~~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~ 115 (246)
T 4f21_A 36 ARFCVIWLHGLGADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVDVEGINSSIA 115 (246)
T ss_dssp CCEEEEEEEC--CCCCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGGSCCC-CHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccchhhhhhHHHHHHHHH
Confidence 46799999999999999998888884 3578888764311 110 1334455
Q ss_pred HHHHHHHHhhc-cCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhH
Q 004396 227 FVEETVRREHA-SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (756)
Q Consensus 227 dv~~~i~~l~~-~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (756)
.+..+++.... ..+..+++|+|+|+||++|+.++.++|+.+.++|.+++.... ..
T Consensus 116 ~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~-----------~~------------- 171 (246)
T 4f21_A 116 KVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPA-----------WD------------- 171 (246)
T ss_dssp HHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTT-----------HH-------------
T ss_pred HHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCc-----------cc-------------
Confidence 66666665432 234568999999999999999999999999999999873311 00
Q ss_pred hhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEE
Q 004396 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (756)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI 385 (756)
.+... ..-...++|++++
T Consensus 172 ---------------------------~~~~~-----------------------------------~~~~~~~~Pvl~~ 189 (246)
T 4f21_A 172 ---------------------------NFKGK-----------------------------------ITSINKGLPILVC 189 (246)
T ss_dssp ---------------------------HHSTT-----------------------------------CCGGGTTCCEEEE
T ss_pred ---------------------------ccccc-----------------------------------ccccccCCchhhc
Confidence 00000 0001125799999
Q ss_pred EeCCCCCCCCHHHHHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 386 ASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 386 ~G~~D~~vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
||++|+++|.+. ++++.+.+. +.+++.+++.||.+..|.=+.+.+.|+
T Consensus 190 HG~~D~vVp~~~-~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~~l~~~~~fL~ 241 (246)
T 4f21_A 190 HGTDDQVLPEVL-GHDLSDKLKVSGFANEYKHYVGMQHSVCMEEIKDISNFIA 241 (246)
T ss_dssp EETTCSSSCHHH-HHHHHHHHHTTTCCEEEEEESSCCSSCCHHHHHHHHHHHH
T ss_pred ccCCCCccCHHH-HHHHHHHHHHCCCCeEEEEECCCCCccCHHHHHHHHHHHH
Confidence 999999999984 777776653 578999999999887554444444443
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.7e-12 Score=135.09 Aligned_cols=100 Identities=15% Similarity=0.176 Sum_probs=75.7
Q ss_pred CCCCEEEEECCCCCchhhHHH---hHhhh-cCCcEEEEeccC--------------CCCCC--------------C-hhH
Q 004396 177 KGSPTLLFLPGIDGLGLGLIL---HHKPL-GKAFEVRCLHIP--------------VYDRT--------------P-FEG 223 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~---~~~~L-~~gy~Vi~~Dl~--------------G~G~S--------------s-~~~ 223 (756)
+..|+||++||.+++...|.. +...+ ..++.|+++|.+ |+|.+ . .+.
T Consensus 49 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~ 128 (283)
T 4b6g_A 49 RPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDY 128 (283)
T ss_dssp CCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHH
T ss_pred CCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCcccccCccCcccchhhHHHH
Confidence 357899999999999888854 22333 458999999976 44433 1 233
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 224 ~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
+++++..+++..... ..+++|+||||||.+|+.+|.++|+.++++++++|...
T Consensus 129 ~~~~~~~~i~~~~~~--~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 181 (283)
T 4b6g_A 129 ILNELPRLIEKHFPT--NGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILS 181 (283)
T ss_dssp HHTHHHHHHHHHSCE--EEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCC
T ss_pred HHHHHHHHHHHhCCC--CCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccc
Confidence 356777777765321 24899999999999999999999999999999998653
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.35 E-value=8.6e-13 Score=146.75 Aligned_cols=100 Identities=11% Similarity=0.014 Sum_probs=85.2
Q ss_pred CCCEEEEECCCCCch-hhHHH-hHhhhcC--CcEEEEeccCCCCCCC-------hhHHHHHHHHHHHHhhcc--CCCCCE
Q 004396 178 GSPTLLFLPGIDGLG-LGLIL-HHKPLGK--AFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEKPI 244 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~-~~~~L~~--gy~Vi~~Dl~G~G~Ss-------~~~~a~dv~~~i~~l~~~--~~~~~v 244 (756)
++|++|++||++++. ..|.. +++.|.+ +|+|+++|++|||.|+ ++++++++.++++.+... .+.+++
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~~~~~i 148 (452)
T 1w52_X 69 SRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYNPENV 148 (452)
T ss_dssp TSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 478999999999988 67887 7788743 8999999999999984 456778889999888422 224589
Q ss_pred EEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 245 ~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
+|+||||||.+|..+|.++|+++.++|+++|+.
T Consensus 149 ~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 149 HIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred EEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 999999999999999999999999999999865
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.2e-12 Score=145.66 Aligned_cols=100 Identities=17% Similarity=0.116 Sum_probs=85.2
Q ss_pred CCCEEEEECCCCCch-hhHHH-hHhhhc--CCcEEEEeccCCCCCCC-------hhHHHHHHHHHHHHhhcc--CCCCCE
Q 004396 178 GSPTLLFLPGIDGLG-LGLIL-HHKPLG--KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEKPI 244 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~-~~~~L~--~gy~Vi~~Dl~G~G~Ss-------~~~~a~dv~~~i~~l~~~--~~~~~v 244 (756)
++|+||++||++++. ..|.. +++.|. .+|+|+++|++|||.|+ ++++++|+.++++.+... .+.+++
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~~~~~i 148 (452)
T 1bu8_A 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPENV 148 (452)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHHHHHHHHHHHHHHHHHhcCCCccce
Confidence 478999999999998 78988 667774 38999999999999984 456778899999988421 223589
Q ss_pred EEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 245 ~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
+|+||||||.+|+.+|.++|+++.++|+++|+.
T Consensus 149 ~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 149 HLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred EEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 999999999999999999999999999999865
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.32 E-value=2.1e-12 Score=135.26 Aligned_cols=96 Identities=21% Similarity=0.171 Sum_probs=84.8
Q ss_pred CCCEEEEECCCCCchh-----hHHHhHhhh-cCCcEEEEeccCCCCCC--ChhHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 004396 178 GSPTLLFLPGIDGLGL-----GLILHHKPL-GKAFEVRCLHIPVYDRT--PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~-----~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--s~~~~a~dv~~~i~~l~~~~~~~~v~LvGh 249 (756)
++|+|||+||++++.. .|..+.+.| .+||+|+++|+||+|.+ +.+++++++.++++.+.. ++++||||
T Consensus 6 ~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~~~~~~~~~~i~~~~~~~~~----~~v~lvGh 81 (285)
T 1ex9_A 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQLLQQVEEIVALSGQ----PKVNLIGH 81 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHHHHHHHCC----SCEEEEEE
T ss_pred CCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCchhhHHHHHHHHHHHHHHhCC----CCEEEEEE
Confidence 4788999999988754 888888998 56899999999999988 578889999999888643 38999999
Q ss_pred ChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 250 SFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 250 S~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
||||.++..++.++|+.|+++|+++++.
T Consensus 82 S~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 82 SHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp TTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred CHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 9999999999999999999999999844
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.32 E-value=2.3e-12 Score=136.90 Aligned_cols=96 Identities=19% Similarity=0.219 Sum_probs=85.2
Q ss_pred CCCEEEEECCCCCch------hhHHHhHhhh-cCCcEEEEeccCCCCCC-----ChhHHHHHHHHHHHHhhccCCCCCEE
Q 004396 178 GSPTLLFLPGIDGLG------LGLILHHKPL-GKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIY 245 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~------~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i~~l~~~~~~~~v~ 245 (756)
++++|||+||++++. ..|..+.+.| .++|+|+++|+||+|.| +.+++++++.++++.+... +++
T Consensus 7 ~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~~~~~~~l~~~i~~~l~~~~~~----~v~ 82 (320)
T 1ys1_X 7 TRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAATGAT----KVN 82 (320)
T ss_dssp CSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSSTTSHHHHHHHHHHHHHHHHCCS----CEE
T ss_pred CCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC----CEE
Confidence 478899999999888 7888899999 56899999999999988 3678889999988886543 899
Q ss_pred EEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 246 LVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 246 LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
||||||||.++..+|.++|++|+++|+++++.
T Consensus 83 lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 83 LVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp EEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 99999999999999999999999999999854
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.31 E-value=2.3e-12 Score=142.60 Aligned_cols=100 Identities=16% Similarity=0.128 Sum_probs=83.3
Q ss_pred CCCEEEEECCCCCch-hhHHH-hHhhh--cCCcEEEEeccCCCCCCC-------hhHHHHHHHHHHHHhhc--cCCCCCE
Q 004396 178 GSPTLLFLPGIDGLG-LGLIL-HHKPL--GKAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHA--SSPEKPI 244 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~-~~~~L--~~gy~Vi~~Dl~G~G~Ss-------~~~~a~dv~~~i~~l~~--~~~~~~v 244 (756)
++|++|++||++++. ..|.. +++.| ..+|+|+++|++|||.|. .+.+++++.++++.+.. ..+.+++
T Consensus 68 ~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~~~~~v 147 (449)
T 1hpl_A 68 GRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDYSPSNV 147 (449)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 478999999999986 57876 66777 568999999999999985 34567788888887742 1224589
Q ss_pred EEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 245 ~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
+||||||||.+|..+|.++|+++.++++++|+.
T Consensus 148 ~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 148 HIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred EEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 999999999999999999999999999999865
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.29 E-value=3.2e-12 Score=117.01 Aligned_cols=91 Identities=19% Similarity=0.189 Sum_probs=74.4
Q ss_pred cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC-----hhHHHHHHHHHH
Q 004396 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-----FEGLVKFVEETV 232 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss-----~~~~a~dv~~~i 232 (756)
+.+|.. ++|...|+ +|+|||+| ++...|..+ |+++|+|+++|+||||.|+ ++++++++.+++
T Consensus 8 ~~~g~~---~~~~~~g~----~~~vv~~H---~~~~~~~~~---l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 74 (131)
T 2dst_A 8 HLYGLN---LVFDRVGK----GPPVLLVA---EEASRWPEA---LPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFA 74 (131)
T ss_dssp EETTEE---EEEEEECC----SSEEEEES---SSGGGCCSC---CCTTSEEEEECCTTSTTCCCCCCCHHHHHHHHHHHH
T ss_pred EECCEE---EEEEEcCC----CCeEEEEc---CCHHHHHHH---HhCCcEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 345544 35555554 67899999 566677666 8777999999999999984 789999999999
Q ss_pred HHhhccCCCCCEEEEEeChhhHHHHHHHHhCCC
Q 004396 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPT 265 (756)
Q Consensus 233 ~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~ 265 (756)
+.+... +++++||||||.+|+.+|.++|.
T Consensus 75 ~~~~~~----~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 75 VMMNLG----APWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHTTCC----SCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHcCCC----ccEEEEEChHHHHHHHHHhcCCc
Confidence 986544 89999999999999999999885
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.29 E-value=6.4e-11 Score=140.19 Aligned_cols=78 Identities=8% Similarity=0.012 Sum_probs=65.2
Q ss_pred hhh-cCCcEEEEeccCCCCCCC------hhHHHHHHHHHHHHhhcc----------------CCCCCEEEEEeChhhHHH
Q 004396 200 KPL-GKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHAS----------------SPEKPIYLVGDSFGGCLA 256 (756)
Q Consensus 200 ~~L-~~gy~Vi~~Dl~G~G~Ss------~~~~a~dv~~~i~~l~~~----------------~~~~~v~LvGhS~GG~vA 256 (756)
+.| ++||.|+++|+||+|.|+ ..+.++|+.++++.+... ....+|.++||||||.++
T Consensus 275 ~~la~~GYaVv~~D~RG~G~S~G~~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~ia 354 (763)
T 1lns_A 275 DYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMA 354 (763)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHH
T ss_pred HHHHHCCCEEEEECCCcCCCCCCcCCCCCHHHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHHHHH
Confidence 445 789999999999999983 235678999999988631 113489999999999999
Q ss_pred HHHHHhCCCcceEEEEeCCCC
Q 004396 257 LAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 257 l~~A~~~P~~v~~lVLi~p~~ 277 (756)
+.+|+.+|+.++++|+.++..
T Consensus 355 l~~Aa~~p~~lkaiV~~~~~~ 375 (763)
T 1lns_A 355 YGAATTGVEGLELILAEAGIS 375 (763)
T ss_dssp HHHHTTTCTTEEEEEEESCCS
T ss_pred HHHHHhCCcccEEEEEecccc
Confidence 999999999999999998865
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.28 E-value=3e-12 Score=141.88 Aligned_cols=100 Identities=15% Similarity=0.110 Sum_probs=85.2
Q ss_pred CCCEEEEECCCCCch-hhHHH-hHhhhc--CCcEEEEeccCCCCCCC-------hhHHHHHHHHHHHHhhcc--CCCCCE
Q 004396 178 GSPTLLFLPGIDGLG-LGLIL-HHKPLG--KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEKPI 244 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~-~~~~L~--~gy~Vi~~Dl~G~G~Ss-------~~~~a~dv~~~i~~l~~~--~~~~~v 244 (756)
++|+||++||++++. ..|.. +.+.|. .+|+|+++|+||+|.|+ ++++++|+.++++.+... .+.+++
T Consensus 69 ~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~~~~~dl~~~i~~l~~~~g~~~~~i 148 (432)
T 1gpl_A 69 NRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNYAPENV 148 (432)
T ss_dssp TSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 478999999999998 68887 778884 58999999999999984 456678888888887432 224589
Q ss_pred EEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 245 ~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
+|+||||||.+|+.+|.++|+++.++++++|+.
T Consensus 149 ~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 149 HIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp EEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred EEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 999999999999999999999999999999865
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.26 E-value=7.6e-12 Score=138.49 Aligned_cols=99 Identities=18% Similarity=0.199 Sum_probs=81.7
Q ss_pred CCCEEEEECCCCCchh-hHHH-hHhhh-c-CCcEEEEeccCCCCCCC-------hhHHHHHHHHHHHHhhc--cCCCCCE
Q 004396 178 GSPTLLFLPGIDGLGL-GLIL-HHKPL-G-KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHA--SSPEKPI 244 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~-~~~~-~~~~L-~-~gy~Vi~~Dl~G~G~Ss-------~~~~a~dv~~~i~~l~~--~~~~~~v 244 (756)
++|++|++||++++.. .|.. +.+.| + .+|+|+++|++|+|.|. .+.+++++.++++.+.. ..+.+++
T Consensus 69 ~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~~~~~v 148 (450)
T 1rp1_A 69 DKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQV 148 (450)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCChhhE
Confidence 4789999999998876 7876 55665 4 37999999999999874 44577888888888741 1123589
Q ss_pred EEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 245 ~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
+||||||||.+|..+|.++|+ +.++++++|+.
T Consensus 149 ~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 149 QLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp EEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred EEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 999999999999999999999 99999999866
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.3e-10 Score=124.12 Aligned_cols=99 Identities=12% Similarity=0.028 Sum_probs=65.0
Q ss_pred CCCEEEEECCCCCchh---------hHHHhHhhh-cCCcEEEEeccCCCCCCC-----h---hHHHHHHHHHH-------
Q 004396 178 GSPTLLFLPGIDGLGL---------GLILHHKPL-GKAFEVRCLHIPVYDRTP-----F---EGLVKFVEETV------- 232 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~---------~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-----~---~~~a~dv~~~i------- 232 (756)
..|+|++.||.+.... .+....... ++||.|+++|+||+|.|+ + .....++.+.+
T Consensus 73 ~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~ 152 (377)
T 4ezi_A 73 QVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELA 152 (377)
T ss_dssp CEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHh
Confidence 4689999999975321 122222223 789999999999999874 1 11222222222
Q ss_pred HHhhccCCCCCEEEEEeChhhHHHHHHHHhCCC-----cceEEEEeCCCC
Q 004396 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPT-----IDLILILSNPAT 277 (756)
Q Consensus 233 ~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~-----~v~~lVLi~p~~ 277 (756)
+.++. ....+++++||||||.+++.+|..+|+ .+.+.+..+++.
T Consensus 153 ~~~g~-~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~ 201 (377)
T 4ezi_A 153 NRLHY-PISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPY 201 (377)
T ss_dssp HHTTC-CEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCC
T ss_pred hccCC-CCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCccc
Confidence 22211 123589999999999999999987543 577888888765
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1e-11 Score=132.60 Aligned_cols=100 Identities=12% Similarity=0.071 Sum_probs=77.8
Q ss_pred CCCEEEEECCCCCc----------hhhH----HHhHhhh-cCCcE---EEEeccCCCCCCC-------hhHHHHHHHHHH
Q 004396 178 GSPTLLFLPGIDGL----------GLGL----ILHHKPL-GKAFE---VRCLHIPVYDRTP-------FEGLVKFVEETV 232 (756)
Q Consensus 178 ~~p~lV~lHG~~~s----------~~~~----~~~~~~L-~~gy~---Vi~~Dl~G~G~Ss-------~~~~a~dv~~~i 232 (756)
++++|||+||++++ ...| ..+++.| .++|+ |+++|++|+|.|+ .+..++++.+.+
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~~I 118 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKTFI 118 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHHHH
Confidence 46779999999994 4578 7888888 55888 9999999999652 334444444444
Q ss_pred HHhhccCCCCCEEEEEeChhhHHHHHHHHhC--CCcceEEEEeCCCC
Q 004396 233 RREHASSPEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (756)
Q Consensus 233 ~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~--P~~v~~lVLi~p~~ 277 (756)
+.+....+.++++||||||||.++..++.++ |++|+++|+++++.
T Consensus 119 ~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 119 DKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGI 165 (342)
T ss_dssp HHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCT
T ss_pred HHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCc
Confidence 4443323335899999999999999999998 89999999999876
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.9e-09 Score=114.24 Aligned_cols=94 Identities=18% Similarity=0.289 Sum_probs=76.6
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCC-CChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDR-TPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~-Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl 257 (756)
+++++|+||++++...|..+...|. +.|+++|+|+... .+++++++++.+.++.+. +..+++|+||||||.+|.
T Consensus 46 ~~~l~~~hg~~g~~~~~~~~~~~l~--~~v~~~~~~~~~~~~~~~~~a~~~~~~i~~~~---~~~~~~l~G~S~Gg~va~ 120 (316)
T 2px6_A 46 ERPLFLVHPIEGSTTVFHSLASRLS--IPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQ---PEGPYRVAGYSYGACVAF 120 (316)
T ss_dssp SCCEEEECCTTCCSGGGHHHHHHCS--SCEEEECCCTTSCTTCHHHHHHHHHHHHTTTC---SSCCCEEEEETHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHhcC--CCEEEEECCCCCCcCCHHHHHHHHHHHHHHhC---CCCCEEEEEECHHHHHHH
Confidence 6789999999999999999999986 9999999995322 268888888888776643 234899999999999999
Q ss_pred HHHHhCC---Cc---ceEEEEeCCCC
Q 004396 258 AVAARNP---TI---DLILILSNPAT 277 (756)
Q Consensus 258 ~~A~~~P---~~---v~~lVLi~p~~ 277 (756)
.+|.+.+ +. +.+++++++..
T Consensus 121 ~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 121 EMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp HHHHHHHHHC---CCCCEEEEESCSS
T ss_pred HHHHHHHHcCCcccccceEEEEcCCc
Confidence 9998763 45 89999988754
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.4e-10 Score=127.92 Aligned_cols=99 Identities=15% Similarity=0.198 Sum_probs=78.5
Q ss_pred CCEEEEECCCCCchhhHH---HhHhhhcC--CcEEEEeccCCCCCCC-----------------hhHHHHHHHHHHHHhh
Q 004396 179 SPTLLFLPGIDGLGLGLI---LHHKPLGK--AFEVRCLHIPVYDRTP-----------------FEGLVKFVEETVRREH 236 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~---~~~~~L~~--gy~Vi~~Dl~G~G~Ss-----------------~~~~a~dv~~~i~~l~ 236 (756)
+.||||+||..++...+. .....|++ ++.|+++|+||||+|. .+++++|+..+++.++
T Consensus 38 g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~ 117 (446)
T 3n2z_B 38 GGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLK 117 (446)
T ss_dssp TCEEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHH
Confidence 345788888887765432 12333432 5699999999999992 4678999999999988
Q ss_pred ccC---CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 237 ASS---PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 237 ~~~---~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
... +..+++++||||||.+|+.++.++|+.|.++|+.+++.
T Consensus 118 ~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv 161 (446)
T 3n2z_B 118 RTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPI 161 (446)
T ss_dssp HHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccch
Confidence 753 45689999999999999999999999999999987654
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.13 E-value=3.1e-10 Score=130.72 Aligned_cols=122 Identities=11% Similarity=-0.082 Sum_probs=91.2
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHH---hH-hhh-cCCcEEEEeccCCCCCCC-----hhHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLIL---HH-KPL-GKAFEVRCLHIPVYDRTP-----FEGL 224 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~---~~-~~L-~~gy~Vi~~Dl~G~G~Ss-----~~~~ 224 (756)
.+...||..+....+.+.+. ...|+||+.||++.....+.. .. +.| ++||.|+++|+||+|.|. +.+.
T Consensus 13 ~i~~~DG~~L~~~~~~P~~~--~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~~~~~ 90 (587)
T 3i2k_A 13 MVPMRDGVRLAVDLYRPDAD--GPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVDD 90 (587)
T ss_dssp EEECTTSCEEEEEEEEECCS--SCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTTTH
T ss_pred EEECCCCCEEEEEEEECCCC--CCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCccccccch
Confidence 34566776654433433332 236889999998887654432 23 566 789999999999999983 5567
Q ss_pred HHHHHHHHHHhhcc-CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCC-Cc
Q 004396 225 VKFVEETVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPA-TS 278 (756)
Q Consensus 225 a~dv~~~i~~l~~~-~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~-~~ 278 (756)
++|+.++++.+... ..+.++.++||||||.+++.+|+.+|+.++++|++++. ..
T Consensus 91 ~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d 146 (587)
T 3i2k_A 91 EADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 146 (587)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred hHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccc
Confidence 88888888887643 12358999999999999999999999999999999987 43
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.10 E-value=2.7e-10 Score=132.18 Aligned_cols=122 Identities=11% Similarity=0.052 Sum_probs=89.8
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCch-------hhHHH-hH---hhh-cCCcEEEEeccCCCCCCC--
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLG-------LGLIL-HH---KPL-GKAFEVRCLHIPVYDRTP-- 220 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~-------~~~~~-~~---~~L-~~gy~Vi~~Dl~G~G~Ss-- 220 (756)
.+...||..+....+.+.+. +..|+||++||++... ..|.. +. +.| ++||.|+++|+||+|.|.
T Consensus 29 ~i~~~DG~~L~~~~~~P~~~--~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g~ 106 (615)
T 1mpx_A 29 MIPMRDGVKLHTVIVLPKGA--KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGD 106 (615)
T ss_dssp EEECTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEECCCCCEEEEEEEeCCCC--CCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCCc
Confidence 34456776644333444332 2368899999988753 13432 22 566 789999999999999882
Q ss_pred ---h-------h----HHHHHHHHHHHHhhcc--CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 221 ---F-------E----GLVKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 221 ---~-------~----~~a~dv~~~i~~l~~~--~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
. . ..++|+.++++.+..+ ..+.++.++||||||.+++.+|..+|+.++++|++++...
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 107 YVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 180 (615)
T ss_dssp CCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred cccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccc
Confidence 2 2 6778888888887654 2235899999999999999999999999999999998775
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.3e-11 Score=133.57 Aligned_cols=97 Identities=13% Similarity=0.155 Sum_probs=70.5
Q ss_pred CCCEEEEECCCCCc--------hhhHH----HhHhhh-cCCcEEEEeccCCCCCCCh--hHHHH----------------
Q 004396 178 GSPTLLFLPGIDGL--------GLGLI----LHHKPL-GKAFEVRCLHIPVYDRTPF--EGLVK---------------- 226 (756)
Q Consensus 178 ~~p~lV~lHG~~~s--------~~~~~----~~~~~L-~~gy~Vi~~Dl~G~G~Ss~--~~~a~---------------- 226 (756)
++++|||+||++++ ...|. .+.+.| .++|+|+++|+||||.|.. .++..
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~ 130 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEK 130 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccccc
Confidence 46789999999875 24564 478888 5789999999999998731 11111
Q ss_pred --------HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh--------------------------CCCcceEEEE
Q 004396 227 --------FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--------------------------NPTIDLILIL 272 (756)
Q Consensus 227 --------dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~--------------------------~P~~v~~lVL 272 (756)
++.++++++. ..++++||||||||.+|..+|.. +|++|.++|+
T Consensus 131 ~~~~~~a~dl~~ll~~l~---~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~ 207 (431)
T 2hih_A 131 YGHERYGKTYEGVLKDWK---PGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITT 207 (431)
T ss_dssp HTCCSEEEEECCSCTTCB---TTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhC---CCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEE
Confidence 1111222211 12589999999999999999876 7899999999
Q ss_pred eCCCC
Q 004396 273 SNPAT 277 (756)
Q Consensus 273 i~p~~ 277 (756)
++++.
T Consensus 208 i~tP~ 212 (431)
T 2hih_A 208 IATPH 212 (431)
T ss_dssp ESCCT
T ss_pred ECCCC
Confidence 99854
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.02 E-value=1.4e-09 Score=114.79 Aligned_cols=99 Identities=16% Similarity=0.078 Sum_probs=75.3
Q ss_pred CCCEEEEECCC--CCchhhHHHh---Hhhh-cCCcEEEEeccCCCC-C---------------CChhHH-HHHHHHHHHH
Q 004396 178 GSPTLLFLPGI--DGLGLGLILH---HKPL-GKAFEVRCLHIPVYD-R---------------TPFEGL-VKFVEETVRR 234 (756)
Q Consensus 178 ~~p~lV~lHG~--~~s~~~~~~~---~~~L-~~gy~Vi~~Dl~G~G-~---------------Ss~~~~-a~dv~~~i~~ 234 (756)
..|+|+++||. +++...|... .+.+ ..++.|+++|.++.. . .+++++ ++++..+++.
T Consensus 33 ~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~ 112 (304)
T 1sfr_A 33 NSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQA 112 (304)
T ss_dssp TBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccccCCccccccccccccHHHHHHHHHHHHHHH
Confidence 47999999999 6677778764 2445 457999999987641 1 134444 4677777776
Q ss_pred -hhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 235 -EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 235 -l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
+... ..+++|+||||||.+|+.+|.++|++++++|++++...
T Consensus 113 ~~~~~--~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 155 (304)
T 1sfr_A 113 NRHVK--PTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLD 155 (304)
T ss_dssp HHCBC--SSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSC
T ss_pred HCCCC--CCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccC
Confidence 3332 23899999999999999999999999999999998653
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=1.8e-09 Score=112.19 Aligned_cols=97 Identities=15% Similarity=0.026 Sum_probs=74.1
Q ss_pred CEEEEECCCC--CchhhHHHhH---hhh-cCCcEEEEeccCCCC-C---------------CChhHH-HHHHHHHHHH-h
Q 004396 180 PTLLFLPGID--GLGLGLILHH---KPL-GKAFEVRCLHIPVYD-R---------------TPFEGL-VKFVEETVRR-E 235 (756)
Q Consensus 180 p~lV~lHG~~--~s~~~~~~~~---~~L-~~gy~Vi~~Dl~G~G-~---------------Ss~~~~-a~dv~~~i~~-l 235 (756)
++|+++||++ ++...|.... +.+ ..++.|+++|.+|.. . .+++++ ++++..+++. +
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~ 109 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANK 109 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCccccccccccHHHHHHHHHHHHHHHHc
Confidence 5899999995 4777887643 345 457999999987542 1 123443 5788888876 4
Q ss_pred hccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 236 HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 236 ~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
... .++++|+||||||.+|+.+|.++|++++++|++++...
T Consensus 110 ~~~--~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 150 (280)
T 1dqz_A 110 GVS--PTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLN 150 (280)
T ss_dssp CCC--SSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred CCC--CCceEEEEECHHHHHHHHHHHhCCchheEEEEecCccc
Confidence 432 24899999999999999999999999999999998663
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=8e-09 Score=113.98 Aligned_cols=99 Identities=10% Similarity=-0.012 Sum_probs=66.3
Q ss_pred CCCEEEEECCCCCchhh--------------------HH--HhHhh-hcCCcEEEEeccCCCCCCC----h--hHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGLG--------------------LI--LHHKP-LGKAFEVRCLHIPVYDRTP----F--EGLVKFV 228 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~--------------------~~--~~~~~-L~~gy~Vi~~Dl~G~G~Ss----~--~~~a~dv 228 (756)
+.|+|.+-||..+.... +. .+... +++||.|+++|++|+|.+- . ....+.+
T Consensus 105 ~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~G~G~~y~~~~~~~~~vlD~v 184 (462)
T 3guu_A 105 PPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAFIAGYEEGMAILDGI 184 (462)
T ss_dssp SCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTTTTTTCTTCHHHHHHHHHHHH
T ss_pred CCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCCCCCCcccCCcchhHHHHHHH
Confidence 47899999999765321 11 12234 6899999999999999862 1 1223333
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC----CC-cceEEEEeCCCC
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN----PT-IDLILILSNPAT 277 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~----P~-~v~~lVLi~p~~ 277 (756)
.+..+.... ....++.++|||+||..++.+|... |+ .+.+.+..+++.
T Consensus 185 rAa~~~~~~-~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p~ 237 (462)
T 3guu_A 185 RALKNYQNL-PSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPV 237 (462)
T ss_dssp HHHHHHTTC-CTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCCC
T ss_pred HHHHHhccC-CCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCCC
Confidence 333332211 1346899999999999998887654 33 588888888765
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.00 E-value=6e-10 Score=120.52 Aligned_cols=98 Identities=13% Similarity=0.081 Sum_probs=71.2
Q ss_pred CCCEEEEECCCCCchh-------hHHHhH----hhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHH--------h--
Q 004396 178 GSPTLLFLPGIDGLGL-------GLILHH----KPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRR--------E-- 235 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~-------~~~~~~----~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~--------l-- 235 (756)
++++|||+||++++.. .|..+. +.| +++|+|+++|++|||.|. +.+.++...++. +
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~--~~a~~l~~~i~~~~vDy~~~~a~ 82 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNW--DRACEAYAQLVGGTVDYGAAHAA 82 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHH--HHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCcc--ccHHHHHHHHHhhhhhhhhhhhh
Confidence 4678999999988653 476444 888 578999999999999763 233344344431 0
Q ss_pred ---------------hccCCCCCEEEEEeChhhHHHHHHHHh-------------------CC------CcceEEEEeCC
Q 004396 236 ---------------HASSPEKPIYLVGDSFGGCLALAVAAR-------------------NP------TIDLILILSNP 275 (756)
Q Consensus 236 ---------------~~~~~~~~v~LvGhS~GG~vAl~~A~~-------------------~P------~~v~~lVLi~p 275 (756)
....+.++++||||||||.++..+|.. +| ++|.++|++++
T Consensus 83 ~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~t 162 (387)
T 2dsn_A 83 KHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIAT 162 (387)
T ss_dssp HHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESC
T ss_pred hccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECC
Confidence 000234589999999999999999972 35 78999999998
Q ss_pred CC
Q 004396 276 AT 277 (756)
Q Consensus 276 ~~ 277 (756)
+.
T Consensus 163 P~ 164 (387)
T 2dsn_A 163 PH 164 (387)
T ss_dssp CT
T ss_pred CC
Confidence 54
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=98.99 E-value=3.5e-09 Score=110.21 Aligned_cols=98 Identities=17% Similarity=0.056 Sum_probs=74.0
Q ss_pred CCEEEEECCCC--CchhhHHH---hHhhh-cCCcEEEEeccCCCC-CC--------Ch-hHHHHHHHHHHHH-hhccCCC
Q 004396 179 SPTLLFLPGID--GLGLGLIL---HHKPL-GKAFEVRCLHIPVYD-RT--------PF-EGLVKFVEETVRR-EHASSPE 241 (756)
Q Consensus 179 ~p~lV~lHG~~--~s~~~~~~---~~~~L-~~gy~Vi~~Dl~G~G-~S--------s~-~~~a~dv~~~i~~-l~~~~~~ 241 (756)
.|+||++||++ ++...|.. +.+.+ ..++.|+++|.++.+ .+ .+ +.+++++..+++. +... .
T Consensus 34 ~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~--~ 111 (280)
T 1r88_A 34 PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRGLA--P 111 (280)
T ss_dssp SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHHHHHSCCC--S
T ss_pred CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCCCCCCCCCcHHHHHHHHHHHHHHHHCCCC--C
Confidence 37999999994 46667765 23445 457999999997642 11 23 3345677777776 3332 2
Q ss_pred CCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 242 ~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
.+++|+||||||.+|+.+|.++|+++++++++++...
T Consensus 112 ~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 148 (280)
T 1r88_A 112 GGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY 148 (280)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCC
T ss_pred CceEEEEECHHHHHHHHHHHhCccceeEEEEECCccC
Confidence 4899999999999999999999999999999998653
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=6.1e-09 Score=109.46 Aligned_cols=101 Identities=11% Similarity=-0.059 Sum_probs=73.1
Q ss_pred CCCCEEEEECCCCCchhhH-------HHhHhhh-cC----CcEEEEeccCCCCCC--Ch-hHHHHHHHHHHHHhhccC--
Q 004396 177 KGSPTLLFLPGIDGLGLGL-------ILHHKPL-GK----AFEVRCLHIPVYDRT--PF-EGLVKFVEETVRREHASS-- 239 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~-------~~~~~~L-~~----gy~Vi~~Dl~G~G~S--s~-~~~a~dv~~~i~~l~~~~-- 239 (756)
+..|+|+++||.+++...| ..+++.| ++ ++.|+++|.+|-... .+ +.+++++..+++......
T Consensus 67 ~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 146 (297)
T 1gkl_A 67 KKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAE 146 (297)
T ss_dssp SCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCSTTCCTTTHHHHHHHTHHHHHHHHSCSSCS
T ss_pred CCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCCccchHHHHHHHHHHHHHHHHHhCCcccc
Confidence 3568899999998765544 3445555 33 599999998763211 23 344677777777642221
Q ss_pred ---------CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 240 ---------PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 240 ---------~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
...++.|+|+||||.+|+.+|.++|+++++++++++..
T Consensus 147 ~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 147 STTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 193 (297)
T ss_dssp SCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred ccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccc
Confidence 22469999999999999999999999999999999854
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=98.92 E-value=3.4e-09 Score=123.47 Aligned_cols=123 Identities=11% Similarity=-0.011 Sum_probs=88.7
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchh--------hHHHh---H-hhh-cCCcEEEEeccCCCCCCC-
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL--------GLILH---H-KPL-GKAFEVRCLHIPVYDRTP- 220 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~--------~~~~~---~-~~L-~~gy~Vi~~Dl~G~G~Ss- 220 (756)
.+...||..+....+.+.+. +..|+||++||++.... .|... . +.| ++||.|+++|+||+|.|.
T Consensus 41 ~i~~~DG~~L~~~l~~P~~~--~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~g 118 (652)
T 2b9v_A 41 MVPMRDGVKLYTVIVIPKNA--RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQG 118 (652)
T ss_dssp EEECTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEECCCCcEEEEEEEecCCC--CCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCCC
Confidence 44556776644333333332 23688999998876521 12221 2 556 789999999999999882
Q ss_pred ----h-------h----HHHHHHHHHHHHhhcc--CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcC
Q 004396 221 ----F-------E----GLVKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (756)
Q Consensus 221 ----~-------~----~~a~dv~~~i~~l~~~--~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~ 279 (756)
. . ..++|+.++++.+... ..+.+|.++||||||.+++.+|.++|+.++++|.+++....
T Consensus 119 ~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 119 DYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 194 (652)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred cccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccc
Confidence 2 2 6778888888887654 22358999999999999999999999999999999887653
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=3e-09 Score=121.12 Aligned_cols=123 Identities=12% Similarity=-0.037 Sum_probs=91.6
Q ss_pred cccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchh-hHH----------------------HhHhhh-cCCcEEE
Q 004396 154 KEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GLI----------------------LHHKPL-GKAFEVR 209 (756)
Q Consensus 154 ~~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~-~~~----------------------~~~~~L-~~gy~Vi 209 (756)
-.+...||..+....|.+.+. ...|+||+.||++.... .+. ...+.| ++||.|+
T Consensus 44 v~i~~~DG~~L~a~l~~P~~~--~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv 121 (560)
T 3iii_A 44 GTVEMRDGEKLYINIFRPNKD--GKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVV 121 (560)
T ss_dssp EEEECTTSCEEEEEEEECSSS--SCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEE
T ss_pred EEEECCCCcEEEEEEEecCCC--CCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEE
Confidence 345566887765545555443 24689999999988732 110 124556 6899999
Q ss_pred EeccCCCCCCC-----h-hHHHHHHHHHHHHhhccC-CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 210 CLHIPVYDRTP-----F-EGLVKFVEETVRREHASS-PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 210 ~~Dl~G~G~Ss-----~-~~~a~dv~~~i~~l~~~~-~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
++|+||+|.|. + ....+|+.++++.+.... .+.+|.++||||||.+++.+|+..|+.++++|..++...
T Consensus 122 ~~D~RG~G~S~G~~~~~~~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~d 197 (560)
T 3iii_A 122 KVALRGSDKSKGVLSPWSKREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLND 197 (560)
T ss_dssp EEECTTSTTCCSCBCTTSHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCCB
T ss_pred EEcCCCCCCCCCccccCChhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCccc
Confidence 99999999993 3 367788888888876432 135899999999999999999999999999999988664
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=98.86 E-value=5.8e-09 Score=114.09 Aligned_cols=121 Identities=11% Similarity=0.075 Sum_probs=84.0
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhH--------------H----HhHhhh-cCCcEEEEeccCC
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGL--------------I----LHHKPL-GKAFEVRCLHIPV 215 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~--------------~----~~~~~L-~~gy~Vi~~Dl~G 215 (756)
.+...+|..+....+.+.+. ....|+||++||.+++...+ . .++..| ++||.|+++|+||
T Consensus 91 ~~~~~~g~~l~~~l~~P~~~-~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg 169 (391)
T 3g8y_A 91 EFYPFPKSVSTFLVLKPEHL-KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAA 169 (391)
T ss_dssp EECCSTTCCEEEEEEEETTC-CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTT
T ss_pred EEEcCCCCEEEEEEEeCCCC-CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCC
Confidence 34455665544444444331 12478999999999887533 2 456667 6799999999999
Q ss_pred CCCCC------------hhHHH---------------HHHHHHHHHhhccCC--CCCEEEEEeChhhHHHHHHHHhCCCc
Q 004396 216 YDRTP------------FEGLV---------------KFVEETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTI 266 (756)
Q Consensus 216 ~G~Ss------------~~~~a---------------~dv~~~i~~l~~~~~--~~~v~LvGhS~GG~vAl~~A~~~P~~ 266 (756)
+|.|. .+.++ .|+..+++.+..... ..+|.++||||||.+|+.+|+.. ++
T Consensus 170 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~-~~ 248 (391)
T 3g8y_A 170 AGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD-KD 248 (391)
T ss_dssp SGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC-TT
T ss_pred ccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC-Cc
Confidence 99874 22232 677777777654321 35799999999999999888765 67
Q ss_pred ceEEEEeCCCC
Q 004396 267 DLILILSNPAT 277 (756)
Q Consensus 267 v~~lVLi~p~~ 277 (756)
++++|+.++..
T Consensus 249 i~a~v~~~~~~ 259 (391)
T 3g8y_A 249 IYAFVYNDFLC 259 (391)
T ss_dssp CCEEEEESCBC
T ss_pred eeEEEEccCCC
Confidence 88888877643
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.6e-08 Score=110.97 Aligned_cols=118 Identities=12% Similarity=0.098 Sum_probs=81.6
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHH------------------HhHhhh-cCCcEEEEeccCCC
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLI------------------LHHKPL-GKAFEVRCLHIPVY 216 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~------------------~~~~~L-~~gy~Vi~~Dl~G~ 216 (756)
+...+|..+....+.+.+. ....|+||++||.+++...+. .+++.| ++||.|+++|+||+
T Consensus 97 ~~~~~g~~l~~~l~~P~~~-~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG~ 175 (398)
T 3nuz_A 97 FYPLPKCVSTFLVLIPDNI-NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAA 175 (398)
T ss_dssp ECCSTTBCEEEEEEEESSC-CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTTS
T ss_pred EEcCCCcEEEEEEEeCCCC-CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCCCC
Confidence 3444565544434444331 124689999999988766433 456677 67999999999999
Q ss_pred CCCChh---------------------------HHHHHHHHHHHHhhccCC--CCCEEEEEeChhhHHHHHHHHhCCCcc
Q 004396 217 DRTPFE---------------------------GLVKFVEETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTID 267 (756)
Q Consensus 217 G~Ss~~---------------------------~~a~dv~~~i~~l~~~~~--~~~v~LvGhS~GG~vAl~~A~~~P~~v 267 (756)
|.|... ..+.|+..+++.+..... ..+|.++||||||.+++.+|+.. +++
T Consensus 176 G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~-~~i 254 (398)
T 3nuz_A 176 GEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD-TSI 254 (398)
T ss_dssp GGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC-TTC
T ss_pred CccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC-CcE
Confidence 987311 123577777777654321 35799999999999999888875 567
Q ss_pred eEEEEeCC
Q 004396 268 LILILSNP 275 (756)
Q Consensus 268 ~~lVLi~p 275 (756)
+++|.+++
T Consensus 255 ~a~v~~~~ 262 (398)
T 3nuz_A 255 YAFVYNDF 262 (398)
T ss_dssp CEEEEESC
T ss_pred EEEEEecc
Confidence 88887765
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.4e-08 Score=103.52 Aligned_cols=99 Identities=14% Similarity=0.168 Sum_probs=64.1
Q ss_pred CCCCEEEEECCCCCc--hhhHHHhHhhh--cCC---cEEEEeccCCCC------------CC------------------
Q 004396 177 KGSPTLLFLPGIDGL--GLGLILHHKPL--GKA---FEVRCLHIPVYD------------RT------------------ 219 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s--~~~~~~~~~~L--~~g---y~Vi~~Dl~G~G------------~S------------------ 219 (756)
+.-|+|+++||.+.. ...+......+ ..+ +-|+++|+++.+ ..
T Consensus 46 ~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (275)
T 2qm0_A 46 SGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKT 125 (275)
T ss_dssp TCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHHHHHHHCSSCCCC---------CCCCC
T ss_pred CCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccccccccCCCCccccCCccccCCcCCCC
Confidence 346899999997542 22333334444 234 899999998621 00
Q ss_pred -ChhHHH----HHHHHHHHHh-hccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 220 -PFEGLV----KFVEETVRRE-HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 220 -s~~~~a----~dv~~~i~~l-~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
..+++. +++..+++.. ... ..+++++||||||.+|+.++.++|+.++++++++|..
T Consensus 126 g~~~~~~~~l~~~l~~~i~~~~~~~--~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~ 187 (275)
T 2qm0_A 126 GGAHNFFTFIEEELKPQIEKNFEID--KGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSI 187 (275)
T ss_dssp CCHHHHHHHHHHTHHHHHHHHSCEE--EEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCT
T ss_pred CChHHHHHHHHHHHHHHHHhhccCC--CCCCEEEEecchhHHHHHHHHhCchhhceeEEeCcee
Confidence 001222 3333334332 111 2479999999999999999999999999999998853
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=2.9e-07 Score=100.94 Aligned_cols=101 Identities=16% Similarity=0.029 Sum_probs=66.4
Q ss_pred CCCCEEEEECCCCCchh-hHHHhHhhh-cCCc----EEEEeccCCCC-CC-------ChhH-HHHHHHHHHHHh-hccCC
Q 004396 177 KGSPTLLFLPGIDGLGL-GLILHHKPL-GKAF----EVRCLHIPVYD-RT-------PFEG-LVKFVEETVRRE-HASSP 240 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~-~~~~~~~~L-~~gy----~Vi~~Dl~G~G-~S-------s~~~-~a~dv~~~i~~l-~~~~~ 240 (756)
+..|+|+++||.+.... .+...++.| ++++ .|+++|.+|++ ++ .+.+ +++++...++.. .....
T Consensus 195 ~~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~~el~~~i~~~~~~~~d 274 (403)
T 3c8d_A 195 EERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSDR 274 (403)
T ss_dssp CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHSCCCCC
T ss_pred CCCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCCChHHHHHHHHHHHHHHHHHHCCCCCC
Confidence 35799999999422110 112234555 3444 59999998732 22 1222 335555555542 11112
Q ss_pred CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 241 ~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
..+++|+||||||.+|+.++.++|+.+.+++++++..
T Consensus 275 ~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~ 311 (403)
T 3c8d_A 275 ADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 311 (403)
T ss_dssp GGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred CCceEEEEECHHHHHHHHHHHhCchhhcEEEEecccc
Confidence 3589999999999999999999999999999999865
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=9e-06 Score=85.61 Aligned_cols=46 Identities=13% Similarity=0.136 Sum_probs=39.2
Q ss_pred CcEEEEEeCCCCCCCCHHHHHHHHHhCC------CeEEEEEcCCCCcccccch
Q 004396 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQ------NCIVRNFKDNGHTLLLEEG 426 (756)
Q Consensus 380 ~PvLvI~G~~D~~vp~~~~~~~l~~~l~------~~~l~~i~~aGH~~~~e~p 426 (756)
.|++++||++|.++|.+. ++++.+.+. +++++.++++||....+..
T Consensus 91 ~Pvli~HG~~D~vVP~~~-s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~ 142 (318)
T 2d81_A 91 RKIYMWTGSSDTTVGPNV-MNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFN 142 (318)
T ss_dssp CEEEEEEETTCCSSCHHH-HHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSC
T ss_pred CcEEEEeCCCCCCcCHHH-HHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCc
Confidence 599999999999999995 888887663 4689999999999876654
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.00 E-value=7.6e-06 Score=86.93 Aligned_cols=51 Identities=18% Similarity=0.239 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
.+++...++..-... ....++||||||..|+.++.++|+.+.+++.++|..
T Consensus 122 ~~el~p~i~~~~~~~--~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~ 172 (331)
T 3gff_A 122 EKELAPSIESQLRTN--GINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSL 172 (331)
T ss_dssp HHTHHHHHHHHSCEE--EEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCT
T ss_pred HHHHHHHHHHHCCCC--CCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchh
Confidence 345555555432111 134799999999999999999999999999999854
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.98 E-value=2.2e-05 Score=98.93 Aligned_cols=90 Identities=20% Similarity=0.269 Sum_probs=72.2
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~ 258 (756)
.++++|+|+.++....|..+...|. .+.|++++.++ .+++++...+.++.+. +..++.++|||+||.+|..
T Consensus 1058 ~~~L~~l~~~~g~~~~y~~la~~L~-~~~v~~l~~~~-----~~~~~~~~~~~i~~~~---~~gp~~l~G~S~Gg~lA~e 1128 (1304)
T 2vsq_A 1058 EQIIFAFPPVLGYGLMYQNLSSRLP-SYKLCAFDFIE-----EEDRLDRYADLIQKLQ---PEGPLTLFGYSAGCSLAFE 1128 (1304)
T ss_dssp CCEEECCCCTTCBGGGGHHHHTTCC-SCEEEECBCCC-----STTHHHHHHHHHHHHC---CSSCEEEEEETTHHHHHHH
T ss_pred CCcceeecccccchHHHHHHHhccc-ccceEeecccC-----HHHHHHHHHHHHHHhC---CCCCeEEEEecCCchHHHH
Confidence 5789999999999999999888888 89999998854 4566666666666543 3458999999999999999
Q ss_pred HHHhC---CCcceEEEEeCCCC
Q 004396 259 VAARN---PTIDLILILSNPAT 277 (756)
Q Consensus 259 ~A~~~---P~~v~~lVLi~p~~ 277 (756)
+|.+. .+.+..++++++..
T Consensus 1129 ~A~~L~~~g~~v~~l~lld~~~ 1150 (1304)
T 2vsq_A 1129 AAKKLEEQGRIVQRIIMVDSYK 1150 (1304)
T ss_dssp HHHHHHHSSCCEEEEEEESCCE
T ss_pred HHHHHHhCCCceeEEEEecCcc
Confidence 99764 35688899998754
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=3.1e-05 Score=80.04 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=31.0
Q ss_pred CEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCC
Q 004396 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPA 276 (756)
Q Consensus 243 ~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~ 276 (756)
++.|+||||||.+|+.++.+ |+.++++++++|.
T Consensus 142 r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 142 RRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred ceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 69999999999999999999 9999999999874
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=97.69 E-value=4.9e-05 Score=85.43 Aligned_cols=100 Identities=12% Similarity=0.054 Sum_probs=67.1
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhh-cC-CcEEEEeccC----CCCCCCh----------hHHHHHHHHHHHHhhcc
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPL-GK-AFEVRCLHIP----VYDRTPF----------EGLVKFVEETVRREHAS 238 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L-~~-gy~Vi~~Dl~----G~G~Ss~----------~~~a~dv~~~i~~l~~~ 238 (756)
..|+||++||.+ ++...+......| .+ ++.|+.+|+| |++.+.- ..-..|....++.+...
T Consensus 98 ~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~ 177 (498)
T 2ogt_A 98 KRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKEN 177 (498)
T ss_dssp CEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCCCcccHHHHHHHHHHHHH
Confidence 478999999987 5554433344556 34 4999999999 7765521 12233444444333221
Q ss_pred ---C--CCCCEEEEEeChhhHHHHHHHHhC--CCcceEEEEeCCCC
Q 004396 239 ---S--PEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (756)
Q Consensus 239 ---~--~~~~v~LvGhS~GG~vAl~~A~~~--P~~v~~lVLi~p~~ 277 (756)
. ...+|+|+|+|.||.+++.++... +..++++|+.+++.
T Consensus 178 i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 223 (498)
T 2ogt_A 178 IAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSG 223 (498)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred HHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCc
Confidence 1 135799999999999998887653 46799999999855
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00043 Score=72.14 Aligned_cols=100 Identities=13% Similarity=0.069 Sum_probs=66.2
Q ss_pred CCCEEEEECCCCCchhhHHHhH--hhh--cCCcEEEEeccC-------CC---------CCC--------------Ch-h
Q 004396 178 GSPTLLFLPGIDGLGLGLILHH--KPL--GKAFEVRCLHIP-------VY---------DRT--------------PF-E 222 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~--~~L--~~gy~Vi~~Dl~-------G~---------G~S--------------s~-~ 222 (756)
.-|+|.++||++++...|.... +.+ ..+..++++|.. +- +.+ .+ +
T Consensus 48 ~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~ 127 (299)
T 4fol_A 48 RIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYD 127 (299)
T ss_dssp CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHH
T ss_pred CcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHH
Confidence 4689999999999999886532 333 235667777631 11 111 12 3
Q ss_pred HHHHHHHHHHHHhhccCC------CCCEEEEEeChhhHHHHHHHHhC--CCcceEEEEeCCCC
Q 004396 223 GLVKFVEETVRREHASSP------EKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (756)
Q Consensus 223 ~~a~dv~~~i~~l~~~~~------~~~v~LvGhS~GG~vAl~~A~~~--P~~v~~lVLi~p~~ 277 (756)
.+++++..+|+..-.... ..+..|.||||||.-|+.+|.++ |+...++...+|..
T Consensus 128 ~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~ 190 (299)
T 4fol_A 128 YIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIV 190 (299)
T ss_dssp HHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCC
T ss_pred HHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEeccccc
Confidence 356777777776432211 23689999999999999999986 56777777766644
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0002 Score=78.90 Aligned_cols=102 Identities=18% Similarity=0.099 Sum_probs=71.5
Q ss_pred CCCCEEEEECCCCCchhhHHHhHh------------------hhcCCcEEEEecc-CCCCCC---------ChhHHHHHH
Q 004396 177 KGSPTLLFLPGIDGLGLGLILHHK------------------PLGKAFEVRCLHI-PVYDRT---------PFEGLVKFV 228 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~------------------~L~~gy~Vi~~Dl-~G~G~S---------s~~~~a~dv 228 (756)
++.|++|++||.+|++..+..+.+ .+.+..+++-+|. .|.|.| +-++.++|+
T Consensus 46 ~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~GtGfS~~~~~~~~~~~~~~a~~~ 125 (452)
T 1ivy_A 46 ENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSN 125 (452)
T ss_dssp GGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEESSCCCCCBHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCCCCCcCCcCCCCCcCCcHHHHHHH
Confidence 468999999999888777643321 1135689999997 699987 123455555
Q ss_pred HHHHHHhhcc---CCCCCEEEEEeChhhHHHHHHHHh----CCCcceEEEEeCCCCc
Q 004396 229 EETVRREHAS---SPEKPIYLVGDSFGGCLALAVAAR----NPTIDLILILSNPATS 278 (756)
Q Consensus 229 ~~~i~~l~~~---~~~~~v~LvGhS~GG~vAl~~A~~----~P~~v~~lVLi~p~~~ 278 (756)
..++...... ....+++|.|+|+||..+..+|.. .+-.++|+++.+|...
T Consensus 126 ~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~~d 182 (452)
T 1ivy_A 126 FEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 182 (452)
T ss_dssp HHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred HHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCccC
Confidence 4444443322 345799999999999966666643 3567999999999764
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00027 Score=71.26 Aligned_cols=102 Identities=13% Similarity=0.037 Sum_probs=74.8
Q ss_pred CCCCEEEEECCCCCchhhH-HHhH------------------hhhcCCcEEEEecc-CCCCCC-----------ChhHHH
Q 004396 177 KGSPTLLFLPGIDGLGLGL-ILHH------------------KPLGKAFEVRCLHI-PVYDRT-----------PFEGLV 225 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~-~~~~------------------~~L~~gy~Vi~~Dl-~G~G~S-----------s~~~~a 225 (756)
.+.|++|+++|.+|++..+ ..+. ..+.+..+++-+|. .|.|.| +.++.+
T Consensus 46 ~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGtGfSy~~~~~~~~~~~~~~~a 125 (255)
T 1whs_A 46 QPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTA 125 (255)
T ss_dssp CSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGGSCCHHHHH
T ss_pred CCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEEEecCCCCccCCCcCccccccCCHHHHH
Confidence 5689999999998887775 4322 11235689999997 499977 235667
Q ss_pred HHHHHHHHHhhccC---CCCCEEEEEeChhhHHHHHHHHhC------CCcceEEEEeCCCCc
Q 004396 226 KFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAARN------PTIDLILILSNPATS 278 (756)
Q Consensus 226 ~dv~~~i~~l~~~~---~~~~v~LvGhS~GG~vAl~~A~~~------P~~v~~lVLi~p~~~ 278 (756)
+|+..+++...... ..++++|.|+|+||..+..+|... .-.++|+++.+|...
T Consensus 126 ~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d 187 (255)
T 1whs_A 126 HDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLID 187 (255)
T ss_dssp HHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCB
T ss_pred HHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccC
Confidence 78777777654433 346899999999999988888532 245889999998664
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=97.58 E-value=6.8e-05 Score=84.02 Aligned_cols=100 Identities=15% Similarity=0.124 Sum_probs=63.8
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhh-cC-CcEEEEeccC----CCCCCC-------hhHHHHHHHHHHHHhhc---c
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPL-GK-AFEVRCLHIP----VYDRTP-------FEGLVKFVEETVRREHA---S 238 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L-~~-gy~Vi~~Dl~----G~G~Ss-------~~~~a~dv~~~i~~l~~---~ 238 (756)
+.|+||++||.+ ++...+......| .+ ++.|+.+|+| |++.+. ...-..|+.+.++.+.. .
T Consensus 96 ~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~ 175 (489)
T 1qe3_A 96 NLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISA 175 (489)
T ss_dssp SEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcchHHHHHHHHHHHHHHHH
Confidence 368999999954 4444333344555 34 4999999999 555431 11112333333332221 1
Q ss_pred C--CCCCEEEEEeChhhHHHHHHHHhC--CCcceEEEEeCCCC
Q 004396 239 S--PEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (756)
Q Consensus 239 ~--~~~~v~LvGhS~GG~vAl~~A~~~--P~~v~~lVLi~p~~ 277 (756)
. ...+|+|+|||+||.+++.++... ++.++++|+.++..
T Consensus 176 fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 176 FGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred hCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 1 134899999999999988877653 57899999998854
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00038 Score=71.43 Aligned_cols=92 Identities=16% Similarity=0.214 Sum_probs=62.9
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEE-eccCCCCCC------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRC-LHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~-~Dl~G~G~S------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
+..||.+||.... .+.+ ..++.+.. .|+++.+.- .++.+.+++..+++.+..+++..++++.|||
T Consensus 74 ~~iVva~RGT~~~-------~d~l~d~~~~~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHS 146 (269)
T 1tib_A 74 KLIVLSFRGSRSI-------ENWIGNLNFDLKEINDICSGCRGHDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHS 146 (269)
T ss_dssp TEEEEEECCCSCT-------HHHHTCCCCCEEECTTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEET
T ss_pred CEEEEEEeCCCCH-------HHHHHhcCeeeeecCCCCCCCEecHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEecCC
Confidence 5688889998642 2233 23455555 466543211 3667778888888888777777899999999
Q ss_pred hhhHHHHHHHHhCCC---cceEEEEeCCCC
Q 004396 251 FGGCLALAVAARNPT---IDLILILSNPAT 277 (756)
Q Consensus 251 ~GG~vAl~~A~~~P~---~v~~lVLi~p~~ 277 (756)
|||.+|..+|..... .+..+.+-+|..
T Consensus 147 LGGalA~l~a~~l~~~~~~~~~~tfg~P~v 176 (269)
T 1tib_A 147 LGGALATVAGADLRGNGYDIDVFSYGAPRV 176 (269)
T ss_dssp HHHHHHHHHHHHHTTSSSCEEEEEESCCCC
T ss_pred hHHHHHHHHHHHHHhcCCCeEEEEeCCCCC
Confidence 999999999987542 355555555533
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00043 Score=78.52 Aligned_cols=100 Identities=11% Similarity=0.040 Sum_probs=62.3
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhhc--CCcEEEEeccC----CCCC------CChhHHHHHHHHHHHHhhcc---C
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIP----VYDR------TPFEGLVKFVEETVRREHAS---S 239 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~gy~Vi~~Dl~----G~G~------Ss~~~~a~dv~~~i~~l~~~---~ 239 (756)
..|+||++||.+ ++..........|. .++.|+.+++| |++. .....-..|+...++.+... .
T Consensus 111 ~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~f 190 (543)
T 2ha2_A 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAAF 190 (543)
T ss_dssp CEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHh
Confidence 358999999965 33332222334552 58999999999 2222 12222233333333332211 1
Q ss_pred --CCCCEEEEEeChhhHHHHHHHHhC--CCcceEEEEeCCCC
Q 004396 240 --PEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (756)
Q Consensus 240 --~~~~v~LvGhS~GG~vAl~~A~~~--P~~v~~lVLi~p~~ 277 (756)
...+|+|+|+|.||..+..++... +..++++|+.++..
T Consensus 191 ggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 191 GGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 135899999999999988777643 46899999998854
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=6.6e-05 Score=99.14 Aligned_cols=93 Identities=19% Similarity=0.287 Sum_probs=0.0
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCC-CChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDR-TPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~-Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl 257 (756)
.++++|+|+.+++...|..+...|. ..|+.+.++|... .++++++++..+.+.... +..++.|+||||||.+|.
T Consensus 2242 ~~~Lfc~~~agG~~~~y~~l~~~l~--~~v~~lq~pg~~~~~~i~~la~~~~~~i~~~~---p~gpy~L~G~S~Gg~lA~ 2316 (2512)
T 2vz8_A 2242 ERPLFLVHPIEGSITVFHGLAAKLS--IPTYGLQCTGAAPLDSIQSLASYYIECIRQVQ---PEGPYRIAGYSYGACVAF 2316 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEeCCccccHHHHHHHHHhhC--CcEEEEecCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEECHhHHHHH
Confidence 5789999999999999998888885 7888998888322 256777777666665533 335899999999999999
Q ss_pred HHHHhCC---Ccce---EEEEeCCC
Q 004396 258 AVAARNP---TIDL---ILILSNPA 276 (756)
Q Consensus 258 ~~A~~~P---~~v~---~lVLi~p~ 276 (756)
++|.+.. ..+. .++++++.
T Consensus 2317 evA~~L~~~G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2317 EMCSQLQAQQSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp -------------------------
T ss_pred HHHHHHHHcCCCCCccceEEEEeCc
Confidence 9997643 2343 67777753
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00053 Score=77.94 Aligned_cols=99 Identities=16% Similarity=0.130 Sum_probs=62.1
Q ss_pred CCEEEEECCCC---CchhhHHHhHhhh-cCCcEEEEeccCCC----CCC-----ChhHHHHHHHHHHHHhhcc---C--C
Q 004396 179 SPTLLFLPGID---GLGLGLILHHKPL-GKAFEVRCLHIPVY----DRT-----PFEGLVKFVEETVRREHAS---S--P 240 (756)
Q Consensus 179 ~p~lV~lHG~~---~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~----G~S-----s~~~~a~dv~~~i~~l~~~---~--~ 240 (756)
.|+||++||.+ ++..........| ..++.|+.+|+|.. ..+ ....-..|+...++.+... . .
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggD 194 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGR 194 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEE
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCC
Confidence 68999999943 3333222233445 57899999999942 111 1112223333333332211 1 1
Q ss_pred CCCEEEEEeChhhHHHHHHHHh--CCCcceEEEEeCCCC
Q 004396 241 EKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (756)
Q Consensus 241 ~~~v~LvGhS~GG~vAl~~A~~--~P~~v~~lVLi~p~~ 277 (756)
..+|+|+|+|.||.+++.++.. .+..++++|+.++..
T Consensus 195 p~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 195 PDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp EEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred hhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 3589999999999999988765 357899999998854
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0008 Score=76.31 Aligned_cols=98 Identities=12% Similarity=0.014 Sum_probs=61.4
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhh--cCCcEEEEeccC----CCCCC-----ChhHHHHHHHHHHHHhhcc---C-
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPL--GKAFEVRCLHIP----VYDRT-----PFEGLVKFVEETVRREHAS---S- 239 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L--~~gy~Vi~~Dl~----G~G~S-----s~~~~a~dv~~~i~~l~~~---~- 239 (756)
+.|+||++||.+ ++...|.. ..| ..++.|+.+++| |++.+ ....-..|+...++.+... .
T Consensus 114 ~~Pv~v~iHGG~~~~g~~~~~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fg 191 (542)
T 2h7c_A 114 RLPVMVWIHGGGLMVGAASTYDG--LALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFG 191 (542)
T ss_dssp CEEEEEEECCSTTTSCCSTTSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGT
T ss_pred CCCEEEEECCCcccCCCccccCH--HHHHhcCCEEEEecCCCCccccCCCCCcccCccchhHHHHHHHHHHHHHHHHHcC
Confidence 478999999953 33333221 224 258999999999 44332 1111122333333322211 1
Q ss_pred -CCCCEEEEEeChhhHHHHHHHHh--CCCcceEEEEeCCCC
Q 004396 240 -PEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (756)
Q Consensus 240 -~~~~v~LvGhS~GG~vAl~~A~~--~P~~v~~lVLi~p~~ 277 (756)
...+|+|+|||.||..+..++.. .+..++++|+.++..
T Consensus 192 gDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 232 (542)
T 2h7c_A 192 GNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 232 (542)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred CCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCc
Confidence 13489999999999999988876 357899999998755
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0013 Score=74.42 Aligned_cols=100 Identities=14% Similarity=0.050 Sum_probs=62.1
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhhc--CCcEEEEeccC----CCCCC------ChhHHHHHHHHHHHHhhc---cC
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIP----VYDRT------PFEGLVKFVEETVRREHA---SS 239 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~gy~Vi~~Dl~----G~G~S------s~~~~a~dv~~~i~~l~~---~~ 239 (756)
+.|+||++||.+ ++..........|. .++.|+.+++| |++.+ +...-..|....++.+.. ..
T Consensus 106 ~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~f 185 (529)
T 1p0i_A 106 NATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAF 185 (529)
T ss_dssp SEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCCCCCCcCcccHHHHHHHHHHHHHHHHHh
Confidence 479999999964 33332222334552 58999999999 32222 212222333333332221 11
Q ss_pred C--CCCEEEEEeChhhHHHHHHHHhC--CCcceEEEEeCCCC
Q 004396 240 P--EKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (756)
Q Consensus 240 ~--~~~v~LvGhS~GG~vAl~~A~~~--P~~v~~lVLi~p~~ 277 (756)
+ ..+|+|+|+|.||..+..++... +..++++|+.++..
T Consensus 186 ggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 186 GGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred CCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 1 24799999999999998887653 36799999999854
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.002 Score=72.60 Aligned_cols=100 Identities=10% Similarity=-0.024 Sum_probs=62.3
Q ss_pred CCCEEEEECCCCCc---hhhHH--HhHhhhcCCcEEEEeccC----CCCCC-------ChhHHHHHHHHHHHHhhcc---
Q 004396 178 GSPTLLFLPGIDGL---GLGLI--LHHKPLGKAFEVRCLHIP----VYDRT-------PFEGLVKFVEETVRREHAS--- 238 (756)
Q Consensus 178 ~~p~lV~lHG~~~s---~~~~~--~~~~~L~~gy~Vi~~Dl~----G~G~S-------s~~~~a~dv~~~i~~l~~~--- 238 (756)
..|+||++||.+.. ...|. .++.....++.|+.+|+| |++.+ +...-..|....++.+...
T Consensus 101 ~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~ 180 (522)
T 1ukc_A 101 KLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQ 180 (522)
T ss_dssp CEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccCCCChhHHHHHHHHHHHHHHHHH
Confidence 46899999997532 22221 122222458999999999 44443 1233344444444443321
Q ss_pred C--CCCCEEEEEeChhhHHHHHHHHhC----CCcceEEEEeCCCC
Q 004396 239 S--PEKPIYLVGDSFGGCLALAVAARN----PTIDLILILSNPAT 277 (756)
Q Consensus 239 ~--~~~~v~LvGhS~GG~vAl~~A~~~----P~~v~~lVLi~p~~ 277 (756)
. ...+|+|+|+|.||..+..++... +..+.++|+.++..
T Consensus 181 fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 181 FGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred cCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 1 134899999999998776665543 57899999998854
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0024 Score=65.71 Aligned_cols=80 Identities=15% Similarity=0.108 Sum_probs=52.7
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChh
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~G 252 (756)
+..||.+||.... ..| +..+ ++.....|....+.. .+..+.+++...++.+..+++..++++.|||||
T Consensus 74 ~~iVvafRGT~~~-~d~---~~d~--~~~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLG 147 (279)
T 1tia_A 74 SAVVLAFRGSYSV-RNW---VADA--TFVHTNPGLCDGCLAELGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLG 147 (279)
T ss_pred CEEEEEEeCcCCH-HHH---HHhC--CcEeecCCCCCCCccChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCHH
Confidence 5688899999742 222 2222 233333444222221 355666777777877776677789999999999
Q ss_pred hHHHHHHHHhCC
Q 004396 253 GCLALAVAARNP 264 (756)
Q Consensus 253 G~vAl~~A~~~P 264 (756)
|.+|+.+|....
T Consensus 148 GalA~l~a~~l~ 159 (279)
T 1tia_A 148 AAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHH
Confidence 999999987753
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0015 Score=73.84 Aligned_cols=100 Identities=14% Similarity=0.074 Sum_probs=61.7
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhh--cCCcEEEEeccC----CCCCC------ChhHHHHHHHHHHHHhhcc---C
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPL--GKAFEVRCLHIP----VYDRT------PFEGLVKFVEETVRREHAS---S 239 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L--~~gy~Vi~~Dl~----G~G~S------s~~~~a~dv~~~i~~l~~~---~ 239 (756)
+.|+||++||.+ ++..........| ..++.|+.+++| |+..+ +...-..|....++.+... .
T Consensus 108 ~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~f 187 (537)
T 1ea5_A 108 STTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFF 187 (537)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCCCCCCCcCccccHHHHHHHHHHHHHHHHh
Confidence 479999999953 3333222223444 358999999999 22221 2122233333333322211 1
Q ss_pred --CCCCEEEEEeChhhHHHHHHHHh--CCCcceEEEEeCCCC
Q 004396 240 --PEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (756)
Q Consensus 240 --~~~~v~LvGhS~GG~vAl~~A~~--~P~~v~~lVLi~p~~ 277 (756)
...+|+|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 188 ggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 188 GGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred CCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 13589999999999999877764 236899999999854
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0094 Score=66.13 Aligned_cols=98 Identities=13% Similarity=0.177 Sum_probs=72.7
Q ss_pred CCEEEEECCCCCchhhHHH---hHhhhc--CCcEEEEeccCCCCCC----------------ChhHHHHHHHHHHHHhhc
Q 004396 179 SPTLLFLPGIDGLGLGLIL---HHKPLG--KAFEVRCLHIPVYDRT----------------PFEGLVKFVEETVRREHA 237 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~---~~~~L~--~gy~Vi~~Dl~G~G~S----------------s~~~~a~dv~~~i~~l~~ 237 (756)
+|++|++-|=+ +...+.. +...++ -+--++.+.+|-+|.| +.++-+.|+..++++++.
T Consensus 43 gPIfl~~gGEg-~~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~ 121 (472)
T 4ebb_A 43 GPIFFYTGNEG-DVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRR 121 (472)
T ss_dssp CCEEEEECCSS-CHHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCc-cccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHh
Confidence 67777775543 3332221 222332 2567999999999998 356667888888888776
Q ss_pred cC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 238 SS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 238 ~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
.. .+.|++++|-|+||++|+.+-.++|+.+.|.+..+.+.
T Consensus 122 ~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 122 DLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp HTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred hcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 54 35689999999999999999999999999999877654
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0042 Score=63.55 Aligned_cols=59 Identities=20% Similarity=0.242 Sum_probs=43.5
Q ss_pred CcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC
Q 004396 205 AFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN 263 (756)
Q Consensus 205 gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~ 263 (756)
...+...++||+... .+..+.+++.+.++.+...++..++++.||||||.+|..+|...
T Consensus 91 d~~~~~~~~p~~~~~~vh~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEEcHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 456667778874222 35666777777777665556667899999999999999998765
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.028 Score=57.83 Aligned_cols=109 Identities=19% Similarity=0.137 Sum_probs=76.1
Q ss_pred ccCCCCCCCCCEEEEECCCCCchhhHHHhHh-----------hh-------cCCcEEEEeccC-CCCCC---------Ch
Q 004396 170 VDCGRPLKGSPTLLFLPGIDGLGLGLILHHK-----------PL-------GKAFEVRCLHIP-VYDRT---------PF 221 (756)
Q Consensus 170 ~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~-----------~L-------~~gy~Vi~~Dl~-G~G~S---------s~ 221 (756)
.++....++.|++|.+.|.+|.+..+..+.+ .| .+..+++-+|.| |.|.| +.
T Consensus 41 ~es~~~p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~PvGtGfSy~~~~~~~~~~ 120 (300)
T 4az3_A 41 VESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATND 120 (300)
T ss_dssp ECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEETTCCCCCBH
T ss_pred EEcCCCCCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHhhhcchhhcCCCcccccccCCCcccccc
Confidence 3433334578999999999888877644331 01 135689999976 77776 35
Q ss_pred hHHHHHHHHHHHHhhccC---CCCCEEEEEeChhhHHHHHHHHhC----CCcceEEEEeCCCCc
Q 004396 222 EGLVKFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAARN----PTIDLILILSNPATS 278 (756)
Q Consensus 222 ~~~a~dv~~~i~~l~~~~---~~~~v~LvGhS~GG~vAl~~A~~~----P~~v~~lVLi~p~~~ 278 (756)
.+.++|+..++....... ..++++|.|.|+||..+-.+|... .-.++|+++-++...
T Consensus 121 ~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~~d 184 (300)
T 4az3_A 121 TEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 184 (300)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred hhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCccC
Confidence 666777777776544333 367999999999999998888542 235789999888663
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.016 Score=58.03 Aligned_cols=99 Identities=12% Similarity=0.006 Sum_probs=69.6
Q ss_pred CCCEEEEECCCCCch----hhHHHhHhhhcCCcEEEEec-cCCCCCC---ChhHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 004396 178 GSPTLLFLPGIDGLG----LGLILHHKPLGKAFEVRCLH-IPVYDRT---PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~----~~~~~~~~~L~~gy~Vi~~D-l~G~G~S---s~~~~a~dv~~~i~~l~~~~~~~~v~LvGh 249 (756)
++|+|++.||.+... .....+...|...+.+-.++ +|-...+ +..+=++++...++....+-|+.+++|+|+
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~~~~q~Vg~YpA~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GY 81 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDIYRWQPIGNYPAAAFPMWPSVEKGVAELILQIELKLDADPYADFAMAGY 81 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTTSEEEECCSCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCcccCccchHHHHHHHHHHHHHHHHhhCCCCeEEEEee
Confidence 379999999997742 12456777776666666663 7655432 344555666666666666678889999999
Q ss_pred ChhhHHHHHHHHhC-----------CCcceEEEEeCCC
Q 004396 250 SFGGCLALAVAARN-----------PTIDLILILSNPA 276 (756)
Q Consensus 250 S~GG~vAl~~A~~~-----------P~~v~~lVLi~p~ 276 (756)
|.|+.++-.++... .++|.++++..-+
T Consensus 82 SQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP 119 (254)
T 3hc7_A 82 SQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNP 119 (254)
T ss_dssp THHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCT
T ss_pred CchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCC
Confidence 99999998887652 2578888886543
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0067 Score=62.02 Aligned_cols=77 Identities=17% Similarity=0.187 Sum_probs=51.3
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
+..||.++|.. +...|.. .+. ....++++.... .+..+.+++...++.+...++..++++.|||
T Consensus 74 ~~ivvafRGT~-~~~d~~~---d~~----~~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~l~~~~~~~~~~~i~vtGHS 145 (269)
T 1lgy_A 74 KTIYLVFRGTN-SFRSAIT---DIV----FNFSDYKPVKGAKVHAGFLSSYEQVVNDYFPVVQEQLTAHPTYKVIVTGHS 145 (269)
T ss_dssp TEEEEEEECCS-CCHHHHH---TCC----CCEEECTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEET
T ss_pred CEEEEEEeCCC-cHHHHHh---hcC----cccccCCCCCCcEeeeehhhhHHHHHHHHHHHHHHHHHHCCCCeEEEeccC
Confidence 55888899994 3333322 221 112344443222 3566677777888877666777899999999
Q ss_pred hhhHHHHHHHHhC
Q 004396 251 FGGCLALAVAARN 263 (756)
Q Consensus 251 ~GG~vAl~~A~~~ 263 (756)
|||.+|..+|...
T Consensus 146 LGGalA~l~a~~~ 158 (269)
T 1lgy_A 146 LGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999999888665
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.021 Score=62.05 Aligned_cols=103 Identities=17% Similarity=0.063 Sum_probs=74.0
Q ss_pred CCCCCEEEEECCCCCchhhHHHhHh-----------------hhcCCcEEEEecc-CCCCCC--------ChhHHHHHHH
Q 004396 176 LKGSPTLLFLPGIDGLGLGLILHHK-----------------PLGKAFEVRCLHI-PVYDRT--------PFEGLVKFVE 229 (756)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~~~~~~-----------------~L~~gy~Vi~~Dl-~G~G~S--------s~~~~a~dv~ 229 (756)
.++.|++|+++|.+|++..+..+.+ .+.+...++-+|. .|.|.| +.++.++|+.
T Consensus 41 ~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiDqPvGtGfSy~~~~~~~~~~~~a~~~~ 120 (421)
T 1cpy_A 41 PAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVY 120 (421)
T ss_dssp TTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGGGGSEEECCCCSTTSTTCEESSCCCCSSHHHHHHHH
T ss_pred CCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccccccCEEEecCCCcccccCCCCCCCCChHHHHHHHH
Confidence 3568999999999888777643221 1224578999995 588877 3456778887
Q ss_pred HHHHHhhccCC---C--CCEEEEEeChhhHHHHHHHHhC------CCcceEEEEeCCCCc
Q 004396 230 ETVRREHASSP---E--KPIYLVGDSFGGCLALAVAARN------PTIDLILILSNPATS 278 (756)
Q Consensus 230 ~~i~~l~~~~~---~--~~v~LvGhS~GG~vAl~~A~~~------P~~v~~lVLi~p~~~ 278 (756)
.+++......+ . ++++|.|+|+||..+..+|... .-.++|+++-++...
T Consensus 121 ~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~~d 180 (421)
T 1cpy_A 121 NFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp HHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESCCCC
T ss_pred HHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCcccC
Confidence 77776554333 3 6899999999999988888542 124789988888763
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0052 Score=70.24 Aligned_cols=100 Identities=14% Similarity=0.043 Sum_probs=61.8
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhh-c-CCcEEEEeccC----CCCCC------------ChhHHHHHHHHHHHHhh
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPL-G-KAFEVRCLHIP----VYDRT------------PFEGLVKFVEETVRREH 236 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L-~-~gy~Vi~~Dl~----G~G~S------------s~~~~a~dv~~~i~~l~ 236 (756)
..|+||++||.+ ++..........| + .++-|+.+++| |+... +...-..|....++.+.
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~wv~ 219 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLK 219 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHHHH
Confidence 468999999954 3333222223445 2 57999999999 33221 11122334444444333
Q ss_pred cc---C--CCCCEEEEEeChhhHHHHHHHHhC--CCcceEEEEeCCCC
Q 004396 237 AS---S--PEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (756)
Q Consensus 237 ~~---~--~~~~v~LvGhS~GG~vAl~~A~~~--P~~v~~lVLi~p~~ 277 (756)
.. . ...+|+|+|+|.||..+..++... ...++++|+.++..
T Consensus 220 ~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 220 DNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 22 1 134899999999999887776642 36799999998754
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.011 Score=66.78 Aligned_cols=100 Identities=14% Similarity=0.017 Sum_probs=60.4
Q ss_pred CCCEEEEECCCCC---chhhH--HHhHh-hh--cCCcEEEEeccCCC----CCC-------ChhHHHHHHHHHHHHhhcc
Q 004396 178 GSPTLLFLPGIDG---LGLGL--ILHHK-PL--GKAFEVRCLHIPVY----DRT-------PFEGLVKFVEETVRREHAS 238 (756)
Q Consensus 178 ~~p~lV~lHG~~~---s~~~~--~~~~~-~L--~~gy~Vi~~Dl~G~----G~S-------s~~~~a~dv~~~i~~l~~~ 238 (756)
..|+||++||.+. +...+ ..++. .+ ..++.|+.+++|.- ..+ ....-.+|....++.+...
T Consensus 113 ~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~n 192 (534)
T 1llf_A 113 NLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADN 192 (534)
T ss_dssp CEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCchhHHHHHHHHHHHHHH
Confidence 4689999999652 33222 12222 23 35799999999842 111 1122234444444433221
Q ss_pred ---C--CCCCEEEEEeChhhHHHHHHHHhC--------CCcceEEEEeCCCC
Q 004396 239 ---S--PEKPIYLVGDSFGGCLALAVAARN--------PTIDLILILSNPAT 277 (756)
Q Consensus 239 ---~--~~~~v~LvGhS~GG~vAl~~A~~~--------P~~v~~lVLi~p~~ 277 (756)
. ...+|+|+|+|.||..+..++... +..++++|+.++..
T Consensus 193 i~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 193 IAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 1 135899999999998777665543 46789999998743
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.013 Score=65.02 Aligned_cols=102 Identities=15% Similarity=0.064 Sum_probs=73.7
Q ss_pred CCCCEEEEECCCCCchhhHHHhH-----------------hhhcCCcEEEEecc-CCCCCC-----------------Ch
Q 004396 177 KGSPTLLFLPGIDGLGLGLILHH-----------------KPLGKAFEVRCLHI-PVYDRT-----------------PF 221 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~-----------------~~L~~gy~Vi~~Dl-~G~G~S-----------------s~ 221 (756)
.+.|++|++||.+|++..+..+. ..+.+...++-+|. .|.|.| +.
T Consensus 65 ~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy~~~~~~~~~~~~~~~~~~ 144 (483)
T 1ac5_A 65 VDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDL 144 (483)
T ss_dssp SSCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSH
T ss_pred cCCCEEEEECCCCchHhhhhhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccCCcCcccccccccccCCCH
Confidence 46899999999988887764322 11234578999997 688876 23
Q ss_pred hHHHHHHHHHHHHhhccCC---CCCEEEEEeChhhHHHHHHHHhC------------CCcceEEEEeCCCCc
Q 004396 222 EGLVKFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAARN------------PTIDLILILSNPATS 278 (756)
Q Consensus 222 ~~~a~dv~~~i~~l~~~~~---~~~v~LvGhS~GG~vAl~~A~~~------------P~~v~~lVLi~p~~~ 278 (756)
++.++++..+++......| ..+++|.|+|+||..+..+|... +-.++|+++-++...
T Consensus 145 ~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T 1ac5_A 145 EDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceeeeEecCCccc
Confidence 5567777777777544433 46899999999999998887431 134789999888763
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.013 Score=66.15 Aligned_cols=100 Identities=8% Similarity=0.037 Sum_probs=60.4
Q ss_pred CCCEEEEECCCCCc---hhhH--HHhH-hhh--cCCcEEEEeccCC----CCCC-------ChhHHHHHHHHHHHHhhcc
Q 004396 178 GSPTLLFLPGIDGL---GLGL--ILHH-KPL--GKAFEVRCLHIPV----YDRT-------PFEGLVKFVEETVRREHAS 238 (756)
Q Consensus 178 ~~p~lV~lHG~~~s---~~~~--~~~~-~~L--~~gy~Vi~~Dl~G----~G~S-------s~~~~a~dv~~~i~~l~~~ 238 (756)
..|+||++||.+.. ...+ ..++ ..+ ..++.|+.+|+|. +..+ ....-..|....++.+...
T Consensus 121 ~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~n 200 (544)
T 1thg_A 121 KLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDN 200 (544)
T ss_dssp CEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHHHHHHHH
Confidence 46899999996432 2222 1122 223 2469999999994 2211 1111233433333333221
Q ss_pred ---C--CCCCEEEEEeChhhHHHHHHHHhC--------CCcceEEEEeCCCC
Q 004396 239 ---S--PEKPIYLVGDSFGGCLALAVAARN--------PTIDLILILSNPAT 277 (756)
Q Consensus 239 ---~--~~~~v~LvGhS~GG~vAl~~A~~~--------P~~v~~lVLi~p~~ 277 (756)
. ...+|+|+|+|.||..++.++... +..++++|+.++..
T Consensus 201 i~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 201 IANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 1 135899999999999888777652 45789999998754
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.039 Score=55.89 Aligned_cols=101 Identities=14% Similarity=0.060 Sum_probs=67.4
Q ss_pred CCCCCEEEEECCCCCchhhH-HHhHh-----------h-------hcCCcEEEEecc-CCCCCC----------ChhHHH
Q 004396 176 LKGSPTLLFLPGIDGLGLGL-ILHHK-----------P-------LGKAFEVRCLHI-PVYDRT----------PFEGLV 225 (756)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~-~~~~~-----------~-------L~~gy~Vi~~Dl-~G~G~S----------s~~~~a 225 (756)
.++.|++|+++|.+|++..+ ..+.+ . +.+..+++-+|. .|.|.| +-++.+
T Consensus 51 p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~d~~~a 130 (270)
T 1gxs_A 51 PAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGFSYSNTSSDLSMGDDKMA 130 (270)
T ss_dssp GGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGCCCHHHHH
T ss_pred CCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEEEEeccccccccCCCCCccccCCcHHHH
Confidence 35689999999998887764 43221 1 124578999996 588987 234457
Q ss_pred HHHHHHHHHhhccC---CCCCEEEEEeChhhHHHHHHHH----hC----CCcceEEEEeCCCCc
Q 004396 226 KFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAA----RN----PTIDLILILSNPATS 278 (756)
Q Consensus 226 ~dv~~~i~~l~~~~---~~~~v~LvGhS~GG~vAl~~A~----~~----P~~v~~lVLi~p~~~ 278 (756)
+|+..+++...... ..++++|.|+| |-.+. .+|. .. .-.++|+++.++...
T Consensus 131 ~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP-~la~~i~~~n~~~~~inLkGi~ign~~~d 192 (270)
T 1gxs_A 131 QDTYTFLVKWFERFPHYNYREFYIAGES-GHFIP-QLSQVVYRNRNNSPFINFQGLLVSSGLTN 192 (270)
T ss_dssp HHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHH-HHHHHHHHTTTTCTTCEEEEEEEESCCCB
T ss_pred HHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchH-HHHHHHHhccccccceeeeeEEEeCCccC
Confidence 77777777654433 35689999999 64443 3332 22 135789999998664
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0052 Score=69.97 Aligned_cols=100 Identities=15% Similarity=0.048 Sum_probs=59.4
Q ss_pred CCCEEEEECCCCCchhhH---------HHhHhhh--cCCcEEEEeccC----CCCCC---------ChhHHHHHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGL---------ILHHKPL--GKAFEVRCLHIP----VYDRT---------PFEGLVKFVEETVR 233 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~---------~~~~~~L--~~gy~Vi~~Dl~----G~G~S---------s~~~~a~dv~~~i~ 233 (756)
+.|+||++||.+.....- ......| ..++-|+.+++| |+..+ .+.|+...+.-+.+
T Consensus 97 ~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~~pgn~gl~D~~~Al~wv~~ 176 (579)
T 2bce_A 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKR 176 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCCCCCccchHHHHHHHHHHHH
Confidence 468999999975322111 1112344 246999999998 43322 13333333322222
Q ss_pred Hhhcc-CCCCCEEEEEeChhhHHHHHHHHh--CCCcceEEEEeCCCC
Q 004396 234 REHAS-SPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (756)
Q Consensus 234 ~l~~~-~~~~~v~LvGhS~GG~vAl~~A~~--~P~~v~~lVLi~p~~ 277 (756)
....- ....+|+|+|+|.||..+..++.. ....++++|+.++..
T Consensus 177 ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 177 NIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred HHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 22111 112489999999999999877754 346889999988643
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=95.67 E-value=0.022 Score=60.88 Aligned_cols=88 Identities=13% Similarity=0.051 Sum_probs=60.5
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEecc-----------CCCCC--------CC---hhHHHHHHHHHHHHhh
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHI-----------PVYDR--------TP---FEGLVKFVEETVRREH 236 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl-----------~G~G~--------Ss---~~~~a~dv~~~i~~l~ 236 (756)
-|++|.+||... .+..||.++.++. +|+|. .+ +..++-++..+++.+.
T Consensus 138 ~Pvii~~~~~~~----------~~~~G~A~i~f~~~~va~d~~~gsrG~g~f~~ly~~~~~~gal~aWAWg~~raiDyL~ 207 (433)
T 4g4g_A 138 FPAIIGIGGASI----------PIPSNVATITFNNDEFGAQMGSGSRGQGKFYDLFGRDHSAGSLTAWAWGVDRLIDGLE 207 (433)
T ss_dssp EEEEEEESCCCS----------CCCTTSEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCCcc----------ccCCCeEEEEeCCcccccccCCCcCCccccccccCCccchHHHHHHHHhHHHHHHHHH
Confidence 467777776321 2578999999986 34431 12 3344456666666654
Q ss_pred c------cCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 237 A------SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 237 ~------~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
. ....++|.++|||+||..|+.+|+.. ++|+.+|..++..
T Consensus 208 ~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~sg~ 253 (433)
T 4g4g_A 208 QVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQESGA 253 (433)
T ss_dssp HHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCT
T ss_pred hccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecCCC
Confidence 4 22246899999999999999999988 5899999887644
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=95.47 E-value=0.016 Score=65.93 Aligned_cols=97 Identities=13% Similarity=0.065 Sum_probs=58.8
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhhc--CCcEEEEeccC----CCCC-----CC----hhHHHHHHHHHHHHhhcc-
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIP----VYDR-----TP----FEGLVKFVEETVRREHAS- 238 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~gy~Vi~~Dl~----G~G~-----Ss----~~~~a~dv~~~i~~l~~~- 238 (756)
..|+||++||.+ ++...+.. ..|+ .++.|+.+|+| |+.. .. +.|....+.-+.+....-
T Consensus 130 ~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~~~n~gl~D~~~al~wv~~ni~~fg 207 (574)
T 3bix_A 130 PKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFG 207 (574)
T ss_dssp CEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSSCCCCHHHHHHHHHHHHHHHHGGGGT
T ss_pred CCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCCCCCCCcccHHHHHHHHHHHHHHHHHhC
Confidence 468999999964 33333221 3342 36999999998 2211 11 333333333222222111
Q ss_pred CCCCCEEEEEeChhhHHHHHHHHhCC---CcceEEEEeCCC
Q 004396 239 SPEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPA 276 (756)
Q Consensus 239 ~~~~~v~LvGhS~GG~vAl~~A~~~P---~~v~~lVLi~p~ 276 (756)
....+|+|+|+|.||.++..++.... ..+.++|+.++.
T Consensus 208 gdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 208 GDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 11347999999999999988876543 468889998764
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=94.98 E-value=0.023 Score=57.67 Aligned_cols=43 Identities=23% Similarity=0.381 Sum_probs=34.2
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC
Q 004396 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN 263 (756)
Q Consensus 221 ~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~ 263 (756)
+..+.+++.+.++.+..+++..++++.|||+||.+|..+|...
T Consensus 104 ~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 146 (261)
T 1uwc_A 104 WISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQL 146 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEecCHHHHHHHHHHHHH
Confidence 4455667777777776667778999999999999999888753
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=94.94 E-value=0.19 Score=48.16 Aligned_cols=97 Identities=9% Similarity=0.044 Sum_probs=64.7
Q ss_pred EEEEECCCCCch------hhH-HHhHhhh-cCCcEEEEe--ccCCCCC------CChhHHHHHHHHHHHHhhccCCCCCE
Q 004396 181 TLLFLPGIDGLG------LGL-ILHHKPL-GKAFEVRCL--HIPVYDR------TPFEGLVKFVEETVRREHASSPEKPI 244 (756)
Q Consensus 181 ~lV~lHG~~~s~------~~~-~~~~~~L-~~gy~Vi~~--Dl~G~G~------Ss~~~~a~dv~~~i~~l~~~~~~~~v 244 (756)
.||+..|.+... ..+ ..+...+ .+...|+.+ ++|-.-. .+..+-++++...|+....+-|+.++
T Consensus 20 ~vi~ARGT~E~~~~G~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tki 99 (197)
T 3qpa_A 20 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATL 99 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEEeeCCCCCCCCCcccHHHHHHHHHhcCCCceEEEeeCCCCcCCCCcccCccccHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 466666654432 212 2233444 356788888 7775421 13445566666666666666788899
Q ss_pred EEEEeChhhHHHHHHHHhCC----CcceEEEEeCCCC
Q 004396 245 YLVGDSFGGCLALAVAARNP----TIDLILILSNPAT 277 (756)
Q Consensus 245 ~LvGhS~GG~vAl~~A~~~P----~~v~~lVLi~p~~ 277 (756)
+|+|+|.|+.++-.++...| ++|.+++|+.-+.
T Consensus 100 VL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~ 136 (197)
T 3qpa_A 100 IAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYTK 136 (197)
T ss_dssp EEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTT
T ss_pred EEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCCc
Confidence 99999999999998887766 7899999876433
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=94.76 E-value=0.066 Score=56.50 Aligned_cols=88 Identities=11% Similarity=0.028 Sum_probs=60.2
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEecc-----------CCCCC--------C---ChhHHHHHHHHHHHHhh
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHI-----------PVYDR--------T---PFEGLVKFVEETVRREH 236 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl-----------~G~G~--------S---s~~~~a~dv~~~i~~l~ 236 (756)
-|++|-+||... .+.+||.++.++. +|+|. . .+..++=++..+|+.+.
T Consensus 106 ~Pvii~i~~~~~----------~~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~~ly~~~~~~gal~awaWg~~raid~L~ 175 (375)
T 3pic_A 106 YPAIIGYGGGSL----------PAPAGVAMINFNNDNIAAQVNTGSRGQGKFYDLYGSSHSAGAMTAWAWGVSRVIDALE 175 (375)
T ss_dssp EEEEEEETTCSS----------CCCTTCEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCCcc----------ccCCCeEEEEecccccccccCCCCccceecccccCCccchHHHHHHHHHHHHHHHHHH
Confidence 356777887321 1467888888874 24441 0 24444556666777665
Q ss_pred ccC----CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 237 ASS----PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 237 ~~~----~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
... ..++|.++|||+||..|+.+|+.. ++|+.+|..++..
T Consensus 176 ~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g~ 219 (375)
T 3pic_A 176 LVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESGA 219 (375)
T ss_dssp HCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCCT
T ss_pred hCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCCC
Confidence 432 236899999999999999999988 4898888887644
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=94.46 E-value=0.12 Score=50.18 Aligned_cols=71 Identities=17% Similarity=0.171 Sum_probs=50.6
Q ss_pred cEEEEeccCCCC------CCC----hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh-------------
Q 004396 206 FEVRCLHIPVYD------RTP----FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR------------- 262 (756)
Q Consensus 206 y~Vi~~Dl~G~G------~Ss----~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~------------- 262 (756)
-.+..+++|-.. ..+ ..+=++++...++....+-|+.+++|+|||.|+.++..++..
T Consensus 36 ~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~ 115 (207)
T 1g66_A 36 STAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAV 115 (207)
T ss_dssp CEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSC
T ss_pred CceEEeeccccccccccCCcchhhhHHHHHHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHhcccccccccccCCC
Confidence 368888998742 222 344566677777776667888999999999999999887742
Q ss_pred -CC----CcceEEEEeCCC
Q 004396 263 -NP----TIDLILILSNPA 276 (756)
Q Consensus 263 -~P----~~v~~lVLi~p~ 276 (756)
.| ++|.+++|+.-+
T Consensus 116 ~l~~~~~~~V~avvlfGdP 134 (207)
T 1g66_A 116 QLSSSAVNMVKAAIFMGDP 134 (207)
T ss_dssp CSCHHHHHHEEEEEEESCT
T ss_pred CCChhhhccEEEEEEEcCC
Confidence 22 467788887643
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=94.42 E-value=0.24 Score=47.06 Aligned_cols=80 Identities=9% Similarity=-0.028 Sum_probs=55.7
Q ss_pred hHhhhcCCcEEEEec--cCCCC------CCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCC----C
Q 004396 198 HHKPLGKAFEVRCLH--IPVYD------RTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP----T 265 (756)
Q Consensus 198 ~~~~L~~gy~Vi~~D--l~G~G------~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P----~ 265 (756)
+...+.....|+.++ +|-.- .++...-++++..+++....+-|+.+++|+|+|.|+.++-.++...| +
T Consensus 41 L~~~~~~~v~v~~V~~~YpA~~~~~~~~~~s~~~g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~~ 120 (187)
T 3qpd_A 41 LKLARSGDVACQGVGPRYTADLPSNALPEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQD 120 (187)
T ss_dssp HHHHSTTCEEEEECCSSCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHcCCCceEEeeCCcccCcCccccccccchhHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhhh
Confidence 444454557889998 77532 11233445566666666555678889999999999999998877665 5
Q ss_pred cceEEEEeCCCC
Q 004396 266 IDLILILSNPAT 277 (756)
Q Consensus 266 ~v~~lVLi~p~~ 277 (756)
+|.+++|+.-+.
T Consensus 121 ~V~avvlfGdP~ 132 (187)
T 3qpd_A 121 KIKGVVLFGYTR 132 (187)
T ss_dssp HEEEEEEESCTT
T ss_pred hEEEEEEeeCCc
Confidence 788999876433
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=94.33 E-value=0.044 Score=57.08 Aligned_cols=42 Identities=21% Similarity=0.384 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 221 ~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
+..+.+++...++.+...++..++++.|||+||++|..+|..
T Consensus 115 ~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 115 WNEISAAATAAVAKARKANPSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp HHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCceEEeecCHHHHHHHHHHHH
Confidence 555666777777777767778899999999999999988765
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=94.30 E-value=0.066 Score=49.45 Aligned_cols=56 Identities=14% Similarity=0.243 Sum_probs=49.7
Q ss_pred CCcEEEEEeCCCCCCCCHHHHHHHHHhCC------------------------CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQ------------------------NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 379 ~~PvLvI~G~~D~~vp~~~~~~~l~~~l~------------------------~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
..++|+.+|+.|.+++.. ..+...+.+. +.++..+.+|||+++.++|+...+.+.
T Consensus 64 girvlIy~Gd~D~i~~~~-Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~ 142 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLT-ATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQ 142 (153)
T ss_dssp TCEEEEEEETTCSSSCHH-HHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHH
T ss_pred CceEEEEecCcCcccccH-hHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHH
Confidence 579999999999999998 4888877774 678899999999999999999999888
Q ss_pred h
Q 004396 435 G 435 (756)
Q Consensus 435 ~ 435 (756)
.
T Consensus 143 ~ 143 (153)
T 1whs_B 143 Y 143 (153)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=94.30 E-value=0.15 Score=49.65 Aligned_cols=96 Identities=10% Similarity=-0.017 Sum_probs=60.0
Q ss_pred EEEEECCCCCchh--hHHHhHhhhc---CCcEEEEeccCCCC------CCC----hhHHHHHHHHHHHHhhccCCCCCEE
Q 004396 181 TLLFLPGIDGLGL--GLILHHKPLG---KAFEVRCLHIPVYD------RTP----FEGLVKFVEETVRREHASSPEKPIY 245 (756)
Q Consensus 181 ~lV~lHG~~~s~~--~~~~~~~~L~---~gy~Vi~~Dl~G~G------~Ss----~~~~a~dv~~~i~~l~~~~~~~~v~ 245 (756)
.||+..|.+.... ....+...|. .+-++..+++|-.. ..+ ..+=++++...++....+-|+.+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhcCCCceEEeeccccccccccCCccccccHHHHHHHHHHHHHHHHhhCCCCcEE
Confidence 3566666544321 1123333332 23368888998742 222 3344566667777766678889999
Q ss_pred EEEeChhhHHHHHHHHh--------------CC----CcceEEEEeCCC
Q 004396 246 LVGDSFGGCLALAVAAR--------------NP----TIDLILILSNPA 276 (756)
Q Consensus 246 LvGhS~GG~vAl~~A~~--------------~P----~~v~~lVLi~p~ 276 (756)
|+|||.|+.++..++.. .| ++|.+++|+.-+
T Consensus 86 l~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1qoz_A 86 LVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp EEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred EEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCC
Confidence 99999999999887751 22 467788886643
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=94.23 E-value=0.045 Score=55.34 Aligned_cols=42 Identities=21% Similarity=0.317 Sum_probs=32.1
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 221 ~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
+..+.+++...++.+..+++..++++.|||+||++|..+|..
T Consensus 103 ~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 103 WSAVHDTIITEVKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 445555666666666666777899999999999999988754
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=93.50 E-value=0.065 Score=54.86 Aligned_cols=42 Identities=21% Similarity=0.409 Sum_probs=31.5
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 221 ~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
+..+.+++...++.+..+++..++++.|||+||.+|..+|..
T Consensus 117 ~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~ 158 (279)
T 3uue_A 117 YNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMD 158 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEcccCHHHHHHHHHHHH
Confidence 445555666666665555667799999999999999988854
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=93.38 E-value=0.37 Score=46.31 Aligned_cols=96 Identities=9% Similarity=-0.037 Sum_probs=62.9
Q ss_pred EEEEECCCCCchh----hHHHhH----hhh-cCCcEEEEe--ccCCCCC------CChhHHHHHHHHHHHHhhccCCCCC
Q 004396 181 TLLFLPGIDGLGL----GLILHH----KPL-GKAFEVRCL--HIPVYDR------TPFEGLVKFVEETVRREHASSPEKP 243 (756)
Q Consensus 181 ~lV~lHG~~~s~~----~~~~~~----~~L-~~gy~Vi~~--Dl~G~G~------Ss~~~~a~dv~~~i~~l~~~~~~~~ 243 (756)
.||+..|.+.... .-..+. ..+ .+...|+.+ ++|-.-. .+..+=++++...++....+-|+.+
T Consensus 27 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tk 106 (201)
T 3dcn_A 27 IYIFARASTEPGNMGISAGPIVADALERIYGANDVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAA 106 (201)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHHCGGGEEEEECCTTCCCCSGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTSE
T ss_pred EEEEecCCCCCCCCCccccHHHHHHHHHhcCCCceEEEEeCCCccccCCcccccCCCHHHHHHHHHHHHHHHHHhCCCCc
Confidence 4666666644331 112233 344 345778888 6765421 1344555666666666666678889
Q ss_pred EEEEEeChhhHHHHHHHHhCC----CcceEEEEeCCC
Q 004396 244 IYLVGDSFGGCLALAVAARNP----TIDLILILSNPA 276 (756)
Q Consensus 244 v~LvGhS~GG~vAl~~A~~~P----~~v~~lVLi~p~ 276 (756)
++|+|+|.|+.++-.++...| ++|.+++|+.-+
T Consensus 107 iVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 143 (201)
T 3dcn_A 107 IVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYT 143 (201)
T ss_dssp EEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCT
T ss_pred EEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCc
Confidence 999999999999998887655 578898887643
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=93.37 E-value=0.46 Score=48.82 Aligned_cols=80 Identities=11% Similarity=0.052 Sum_probs=55.7
Q ss_pred HhHhhh-cCCcEEEEeccCCCCC--------C----ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh-
Q 004396 197 LHHKPL-GKAFEVRCLHIPVYDR--------T----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR- 262 (756)
Q Consensus 197 ~~~~~L-~~gy~Vi~~Dl~G~G~--------S----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~- 262 (756)
.+.+.+ .....++.++++-.-. - +..+=++++...|+....+-++.+++|+|+|.|+.++-.++..
T Consensus 75 ~L~~~~~g~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i 154 (302)
T 3aja_A 75 PLAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDI 154 (302)
T ss_dssp HHHHHSCTTTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHcCCCcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhc
Confidence 344455 3567788999876521 1 2344456666666666666788899999999999999887753
Q ss_pred -------CCCcceEEEEeCCC
Q 004396 263 -------NPTIDLILILSNPA 276 (756)
Q Consensus 263 -------~P~~v~~lVLi~p~ 276 (756)
.+++|.+++|+.-.
T Consensus 155 ~~g~~~~~~~~V~aVvLfGdP 175 (302)
T 3aja_A 155 GNGRGPVDEDLVLGVTLIADG 175 (302)
T ss_dssp HTTCSSSCGGGEEEEEEESCT
T ss_pred cCCCCCCChHHEEEEEEEeCC
Confidence 23789888887643
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=93.27 E-value=0.083 Score=54.70 Aligned_cols=42 Identities=19% Similarity=0.321 Sum_probs=30.7
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 221 ~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
+..+.+++...++.+..+++..++++.|||+||++|..+|..
T Consensus 133 ~~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 174 (301)
T 3o0d_A 133 YNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGIN 174 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEeccChHHHHHHHHHHH
Confidence 333444555555555555677899999999999999988865
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=90.97 E-value=0.83 Score=44.15 Aligned_cols=68 Identities=10% Similarity=-0.013 Sum_probs=50.3
Q ss_pred EEEEeccCCCC-CCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC--C----CcceEEEEeCC
Q 004396 207 EVRCLHIPVYD-RTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN--P----TIDLILILSNP 275 (756)
Q Consensus 207 ~Vi~~Dl~G~G-~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~--P----~~v~~lVLi~p 275 (756)
..+.+++|-.- ..+ .+-++++...|+....+-|+.+++|+|+|.|+.++-.++... | ++|.+++|+.-
T Consensus 42 ~~~~V~YpA~~~y~S-~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGd 116 (205)
T 2czq_A 42 TIYNTVYTADFSQNS-AAGTADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGN 116 (205)
T ss_dssp EEEECCSCCCTTCCC-HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESC
T ss_pred CceeecccccCCCcC-HHHHHHHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeC
Confidence 34677775421 113 667777888888777778888999999999999998877654 4 47888888764
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=87.24 E-value=1 Score=41.40 Aligned_cols=60 Identities=17% Similarity=0.221 Sum_probs=48.3
Q ss_pred ccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC-----------------------------CeEEEEEcCCCCcccccc
Q 004396 375 LHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-----------------------------NCIVRNFKDNGHTLLLEE 425 (756)
Q Consensus 375 l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~-----------------------------~~~l~~i~~aGH~~~~e~ 425 (756)
|..-.+++|+.+|+.|.+++.. ..+...+.+. +.++..+.+|||+++.++
T Consensus 59 Ll~~girVliy~Gd~D~icn~~-G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dq 137 (155)
T 4az3_B 59 LSSQKYQILLYNGDVDMACNFM-GDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDK 137 (155)
T ss_dssp HHTCCCEEEEEEETTCSSSCHH-HHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHC
T ss_pred HHHcCceEEEEecccCcccCcH-hHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhC
Confidence 3344679999999999999988 4777766653 234677889999999999
Q ss_pred hhhHHHHhhh
Q 004396 426 GISLLTIIKG 435 (756)
Q Consensus 426 p~~~~~~I~~ 435 (756)
|+...+.+.+
T Consensus 138 P~~al~m~~~ 147 (155)
T 4az3_B 138 PLAAFTMFSR 147 (155)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988873
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=86.11 E-value=0.56 Score=49.35 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=24.8
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
+.+.++......+..++++.|||+||++|..+|..
T Consensus 152 l~~~l~~~~~~~~~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 152 ILQFLNEKIGPEGKAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp HHHHHHHHHCTTCCEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhhhhccCCceEEEecCChHHHHHHHHHHH
Confidence 34444443333345689999999999999988864
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=81.45 E-value=2.5 Score=38.85 Aligned_cols=56 Identities=16% Similarity=0.277 Sum_probs=46.4
Q ss_pred CCcEEEEEeCCCCCCCCHHHHHHHHHhCC---------------------------CeEEEEEcCCCCcccccchhhHHH
Q 004396 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQ---------------------------NCIVRNFKDNGHTLLLEEGISLLT 431 (756)
Q Consensus 379 ~~PvLvI~G~~D~~vp~~~~~~~l~~~l~---------------------------~~~l~~i~~aGH~~~~e~p~~~~~ 431 (756)
..++|+.+|+.|.+++.. ..+...+.+. +.++..+.+|||+++.++|+...+
T Consensus 66 girVliysGd~D~i~~~~-Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~ 144 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVS-STRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFL 144 (158)
T ss_dssp TCEEEEEEETTCSSSCHH-HHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHH
T ss_pred CCeEEEEecccCccCCcH-HHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHH
Confidence 579999999999999988 4777666552 245678899999999999999998
Q ss_pred Hhhh
Q 004396 432 IIKG 435 (756)
Q Consensus 432 ~I~~ 435 (756)
.+.+
T Consensus 145 m~~~ 148 (158)
T 1gxs_B 145 LFKQ 148 (158)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8874
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 756 | ||||
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 1e-04 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 7e-04 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 0.001 |
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 42.4 bits (99), Expect = 1e-04
Identities = 23/162 (14%), Positives = 45/162 (27%), Gaps = 18/162 (11%)
Query: 148 DYLDAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH--KPLGKA 205
D L + + G + + G T++ G + L
Sbjct: 11 DLLAGLSDFREHFDGSDGFSLDLVDMADGPGEVTVICCAGTAAISGPHEFTRLAGALRGI 70
Query: 206 FEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVA 260
VR + P Y+ + + V R +KP + G S G +A A+A
Sbjct: 71 APVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIRT---QGDKPFVVAGHSAGALMAYALA 127
Query: 261 ARNP----TIDLILILSNPATSFGRSQLQPLFPILKAMPDEL 298
++++ + L+ + L
Sbjct: 128 TELLDRGHPPRGVVLIDVYP----PGHQDAMNAWLEELTATL 165
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 40.1 bits (93), Expect = 7e-04
Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 4/121 (3%)
Query: 173 GRPLKGSPTLLFLPGIDGLGLGLILHH--KPLGKA-FEVRCLHIPVYDRTPFEGLVKFVE 229
P S +L +PG G + + + + P + + +++
Sbjct: 25 ASPSSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMV 84
Query: 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP-TIDLILILSNPATSFGRSQLQPLF 288
+ +A S + ++ S GG +A P + L A + + L
Sbjct: 85 NAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPL 144
Query: 289 P 289
Sbjct: 145 D 145
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 39.4 bits (90), Expect = 0.001
Identities = 38/249 (15%), Positives = 73/249 (29%), Gaps = 18/249 (7%)
Query: 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREH 236
+G+ L+ L G + L F + + +P + R+ +
Sbjct: 9 QGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGF--GALSLADMAEAV 66
Query: 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD 296
+G S GG +A +A +P L+ + F + D
Sbjct: 67 LQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCF-------------SARD 113
Query: 297 ELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDT 356
E P +L+ +E L + + + L + + + D
Sbjct: 114 EWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDV 173
Query: 357 LLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKD 416
L L++LK+ L V L L D ++P + L+ + F
Sbjct: 174 LNGGLEILKTVDLR--QPLQNVSMPFLRLYGYLDGLVPRKV-VPMLDKLWPHSESYIFAK 230
Query: 417 NGHTLLLEE 425
H +
Sbjct: 231 AAHAPFISH 239
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 756 | |||
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.95 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.95 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.94 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.94 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.94 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.94 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.94 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.94 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.94 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.94 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.94 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.94 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.93 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.93 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.93 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.93 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.93 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.93 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.92 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.91 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.91 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.9 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.9 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.87 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.86 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.85 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.85 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.85 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.84 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.77 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.74 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.73 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.73 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.72 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.7 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.68 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.66 | |
| d1iuqa_ | 367 | Glycerol-3-phosphate (1)-acyltransferase {Cushaw s | 99.65 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.65 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.64 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.62 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.62 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.6 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.57 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.56 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.53 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.53 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.52 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.5 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.48 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.48 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.48 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.44 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.43 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.43 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.37 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.36 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.35 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.34 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.28 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.17 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.13 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 98.91 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 98.88 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 98.8 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 98.79 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 98.78 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 98.71 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 98.7 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 98.68 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.52 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.48 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 98.45 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.42 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.38 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.26 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.23 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 98.19 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.16 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.11 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.05 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.04 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.0 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 97.96 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 97.85 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 97.85 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 97.84 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 97.67 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 97.42 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 94.39 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 94.31 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 94.22 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 94.22 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 94.16 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 94.01 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 94.0 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 93.99 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 93.36 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 93.24 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 93.08 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 92.92 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 92.1 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 92.08 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 89.98 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 89.42 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 88.1 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 85.87 |
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.95 E-value=9e-29 Score=255.45 Aligned_cols=239 Identities=15% Similarity=0.130 Sum_probs=157.9
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchh---hHHHhHhhhcCCcEEEEeccCCCCCCC------------hhHHHHHHHHH
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGL---GLILHHKPLGKAFEVRCLHIPVYDRTP------------FEGLVKFVEET 231 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~---~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss------------~~~~a~dv~~~ 231 (756)
+++..+|++ ++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+ .+++++++.++
T Consensus 16 ~h~~~~G~~--~~p~ivllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 93 (281)
T d1c4xa_ 16 SHALVAGDP--QSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGL 93 (281)
T ss_dssp EEEEEESCT--TSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHHHHHH
T ss_pred EEEEEEecC--CCCEEEEECCCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCCCccccccccccccchhhHHHhhhhcccc
Confidence 477778874 6899999999986553 577889999999999999999999983 45778888888
Q ss_pred HHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcC
Q 004396 232 VRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMG 311 (756)
Q Consensus 232 i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (756)
++++..+ +++++||||||.+|+.+|.++|++++++|++++..............................+.....
T Consensus 94 i~~~~~~----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (281)
T d1c4xa_ 94 MNHFGIE----KSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVY 169 (281)
T ss_dssp HHHHTCS----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHHHHHTTSS
T ss_pred ccccccc----cceeccccccccccccccccccccccceEEeccccCccccchhHHHHHHHhhhhcccchhhhhhhhhcc
Confidence 8887655 899999999999999999999999999999998654322221111111111111000011111111111
Q ss_pred ChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHH-HHHH------HHHhhhccCCCCcEEE
Q 004396 312 DPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLL-KSAS------AYANSRLHAVKAEVLV 384 (756)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~l~~i~~PvLv 384 (756)
++.. ................ .. ......... .... ......+.++++|+|+
T Consensus 170 ~~~~--------~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 227 (281)
T d1c4xa_ 170 DPEN--------FPGMEEIVKSRFEVAN-------------DP-EVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLV 227 (281)
T ss_dssp CSTT--------CTTHHHHHHHHHHHHH-------------CH-HHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEE
T ss_pred cccc--------cchhhhHHHHHhhhcc-------------cc-hhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEE
Confidence 1100 0000000000000000 00 000000000 0000 0012456889999999
Q ss_pred EEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 385 LASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 385 I~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
|+|++|.++|.+. .+.+.+.++++++++++++||++++|+|+++++.|.
T Consensus 228 i~G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 276 (281)
T d1c4xa_ 228 FHGRQDRIVPLDT-SLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLM 276 (281)
T ss_dssp EEETTCSSSCTHH-HHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHH
T ss_pred EEeCCCCCcCHHH-HHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 9999999999995 999999999999999999999999999999999998
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.95 E-value=4.3e-27 Score=240.26 Aligned_cols=246 Identities=13% Similarity=0.203 Sum_probs=161.2
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchh---hHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL---GLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLV 225 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~---~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a 225 (756)
+++.||.. ++|.+.|+ +|+|||+||++++.. .|..+++.|+++|+|+++|+||||.| +.++++
T Consensus 6 ~~~~dg~~---l~y~~~G~----g~~vvllHG~~~~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~ 78 (268)
T d1j1ia_ 6 FVNAGGVE---TRYLEAGK----GQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRI 78 (268)
T ss_dssp EEEETTEE---EEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHH
T ss_pred EEEECCEE---EEEEEEcC----CCeEEEECCCCCCccHHHHHHHHHHHHhcCCEEEEEcccccccccCCcccccccccc
Confidence 44567766 57888887 688999999987654 47778889999999999999999998 588999
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhH
Q 004396 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (756)
Q Consensus 226 ~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (756)
+++.++++.+... .+++++||||||.+++.+|.++|++|+++|+++|+....... ............ .......
T Consensus 79 ~~~~~~i~~l~~~---~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 152 (268)
T d1j1ia_ 79 RHLHDFIKAMNFD---GKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIH-EDLRPIINYDFT--REGMVHL 152 (268)
T ss_dssp HHHHHHHHHSCCS---SCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC-----------CCSC--HHHHHHH
T ss_pred ccchhhHHHhhhc---ccceeeeccccccccchhhccChHhhheeeecCCCccccccc-hhhhhhhhhhhh--hhhhHHH
Confidence 9999999987543 379999999999999999999999999999999865322111 111111110000 0001111
Q ss_pred hhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHH--HHhhhccCCCCcEE
Q 004396 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASA--YANSRLHAVKAEVL 383 (756)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~i~~PvL 383 (756)
......+. ..... ............ . .................. ...+.+.++++|+|
T Consensus 153 ~~~~~~~~---------~~~~~-~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 212 (268)
T d1j1ia_ 153 VKALTNDG---------FKIDD-AMINSRYTYATD---E-------ATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTL 212 (268)
T ss_dssp HHHHSCTT---------CCCCH-HHHHHHHHHHHS---H-------HHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEE
T ss_pred HHHHhhhh---------hhhhh-hhhHHHHHhhhh---h-------hhhhhhhhhhhhhhccccccchhhhHhhCCCCEE
Confidence 11111110 00000 000000000000 0 000001111111111000 01245788999999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 384 VLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 384 vI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+|+|++|.+++++. .+.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 213 ~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 263 (268)
T d1j1ia_ 213 VVQGKDDKVVPVET-AYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLS 263 (268)
T ss_dssp EEEETTCSSSCHHH-HHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHH-HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 99999999999985 9999999999999999999999999999999999983
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.94 E-value=3.6e-27 Score=243.69 Aligned_cols=262 Identities=15% Similarity=0.122 Sum_probs=167.1
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------ChhHHHHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKF 227 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------s~~~~a~d 227 (756)
.+++.+|.. ++|.+.|. +++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +.+++++|
T Consensus 10 ~~i~~~g~~---i~y~~~G~--~~~p~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~ 84 (291)
T d1bn7a_ 10 HYVEVLGER---MHYVDVGP--RDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRY 84 (291)
T ss_dssp EEEEETTEE---EEEEEESC--SSSSCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCSCCCCHHHHHHH
T ss_pred eEEEECCEE---EEEEEeCC--CCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCccccccccccchhHHHHH
Confidence 344556766 57888886 3578999999999999999999999999999999999999998 49999999
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhh
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS 307 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (756)
+.+++++++.. +++|+||||||.+++.+|.++|+.+++++++++............. ......... ......
T Consensus 85 l~~~l~~l~~~----~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~ 156 (291)
T d1bn7a_ 85 LDAFIEALGLE----EVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEF--ARETFQAFR--TADVGR 156 (291)
T ss_dssp HHHHHHHTTCC----SEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHH--HHHHHHHHT--STTHHH
T ss_pred Hhhhhhhhccc----cccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhh--hhhHHHHHh--hhhhHH
Confidence 99999997655 8999999999999999999999999999998876533222211110 000000000 000000
Q ss_pred hhcCChhHH---HHHhhhcCCChHHHHHHHHhhhhhhh--hhhhhhhccC-ChhhHHHHHHHHHHHHHHHhhhccCCCCc
Q 004396 308 YVMGDPIKM---AMVNIENRLPPRIKLEQLSNNLPALL--PRLSVMSDII-PKDTLLWKLKLLKSASAYANSRLHAVKAE 381 (756)
Q Consensus 308 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 381 (756)
......... .......................... .......... ....... ...........+.++++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~P 232 (291)
T d1bn7a_ 157 ELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPAN----IVALVEAYMNWLHQSPVP 232 (291)
T ss_dssp HHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHH----HHHHHHHHHHHHHHCCSC
T ss_pred HhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhch----hhhhhhhhhhhhhcCCCC
Confidence 000000000 00000000000011111111000000 0000000000 0000000 001111122456789999
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 382 VLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 382 vLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
+|+|+|++|.+++++. ++++.+.++++++++++++||++++|+|+++++.|.
T Consensus 233 ~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~ 284 (291)
T d1bn7a_ 233 KLLFWGTPGVLIPPAE-AARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIA 284 (291)
T ss_dssp EEEEEEEECSSSCHHH-HHHHHHHSTTEEEEEEEEESSCGGGTCHHHHHHHHH
T ss_pred EEEEEeCCCCCcCHHH-HHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 9999999999999995 999999999999999999999999999999999987
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.94 E-value=1.6e-26 Score=236.50 Aligned_cols=247 Identities=11% Similarity=0.083 Sum_probs=159.2
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKF 227 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~d 227 (756)
+.+.||.. ++|.+.|+ +|+|||+||++++...|..+++.| +++|+|+++|+||||.| ++.++++|
T Consensus 3 ~~t~dG~~---l~y~~~G~----g~~ivlvHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d 75 (274)
T d1a8qa_ 3 CTTRDGVE---IFYKDWGQ----GRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADD 75 (274)
T ss_dssp EECTTSCE---EEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHH
T ss_pred EECcCCCE---EEEEEECC----CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccchhhHHH
Confidence 34667766 57778887 688999999999999999999988 68999999999999998 58899999
Q ss_pred HHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh-CCCcceEEEEeCCCCcCCcCCcC----CchhHHhhchhHHHHh-
Q 004396 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR-NPTIDLILILSNPATSFGRSQLQ----PLFPILKAMPDELHCA- 301 (756)
Q Consensus 228 v~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~-~P~~v~~lVLi~p~~~~~~~~~~----~~~~~~~~~~~~~~~~- 301 (756)
+.++++++..+ +++++||||||.+++.++++ .|+++++++++++.......... ........+.......
T Consensus 76 l~~~l~~l~~~----~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (274)
T d1a8qa_ 76 LNDLLTDLDLR----DVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTER 151 (274)
T ss_dssp HHHHHHHTTCC----SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhh----hhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhhhh
Confidence 99999997655 89999999999999887655 58999999999976533222111 1111111111100000
Q ss_pred ---HHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH-HHHHhhhccC
Q 004396 302 ---VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHA 377 (756)
Q Consensus 302 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 377 (756)
............ ........ .....+... ................ ..+..+.+.+
T Consensus 152 ~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~~ 210 (274)
T d1a8qa_ 152 SQFWKDTAEGFFSAN------RPGNKVTQ-GNKDAFWYM--------------AMAQTIEGGVRCVDAFGYTDFTEDLKK 210 (274)
T ss_dssp HHHHHHHHHHHTTTT------STTCCCCH-HHHHHHHHH--------------HTTSCHHHHHHHHHHHHHCCCHHHHTT
T ss_pred HHHhhhhhhhhhhcc------ccchhhhh-hHHHHHHHh--------------hhccchhhhhhHHHHhhccchHHHHHh
Confidence 000000000000 00000000 000000000 0000111111111111 1111356789
Q ss_pred CCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccc--cchhhHHHHhh
Q 004396 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLL--EEGISLLTIIK 434 (756)
Q Consensus 378 i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~--e~p~~~~~~I~ 434 (756)
+++|+++|+|++|.+++.+...+.+.+.+|++++++++++||++++ ++|+++++.|.
T Consensus 211 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~ 269 (274)
T d1a8qa_ 211 FDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLL 269 (274)
T ss_dssp CCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHH
T ss_pred ccceeeeeccCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCcccccccCHHHHHHHHH
Confidence 9999999999999999986435677888999999999999999887 67899999887
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.94 E-value=1.4e-26 Score=240.32 Aligned_cols=253 Identities=15% Similarity=0.127 Sum_probs=160.7
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHH-HhHhhh-cCCcEEEEeccCCCCCC----------ChhHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLI-LHHKPL-GKAFEVRCLHIPVYDRT----------PFEGL 224 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~-~~~~~L-~~gy~Vi~~Dl~G~G~S----------s~~~~ 224 (756)
+..+|.. ++|.+.|++ ++|+|||+||++++...|. .+.+.| +++|+|+++|+||||+| +++++
T Consensus 5 ~~~g~~~---i~y~~~G~~--~~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 79 (297)
T d1q0ra_ 5 VPSGDVE---LWSDDFGDP--ADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGEL 79 (297)
T ss_dssp EEETTEE---EEEEEESCT--TSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHH
T ss_pred EEECCEE---EEEEEecCC--CCCEEEEECCCCcChhHHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccccchh
Confidence 3444544 688888863 6899999999999999985 456776 67899999999999988 48999
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhch------hHH
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP------DEL 298 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~------~~~ 298 (756)
++|+..++++++.. +++++||||||.+++.+|.++|++|+++|++++......... .......... ...
T Consensus 80 ~~d~~~ll~~l~~~----~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 154 (297)
T d1q0ra_ 80 AADAVAVLDGWGVD----RAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDA-NIERVMRGEPTLDGLPGPQ 154 (297)
T ss_dssp HHHHHHHHHHTTCS----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHH-HHHHHHHTCCCSSCSCCCC
T ss_pred hhhhcccccccccc----ceeeccccccchhhhhhhcccccceeeeEEEccccccccchh-hhHHHhhhhhhhhhhhhhh
Confidence 99999999997655 899999999999999999999999999999988652211000 0000000000 000
Q ss_pred HHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHH-HHHHHHHH-----------
Q 004396 299 HCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLL-WKLKLLKS----------- 366 (756)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----------- 366 (756)
......... ..... ............... .+............. +.......
T Consensus 155 ~~~~~~~~~-~~~~~-----------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (297)
T d1q0ra_ 155 QPFLDALAL-MNQPA-----------EGRAAEVAKRVSKWR----ILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAH 218 (297)
T ss_dssp HHHHHHHHH-HHSCC-----------CSHHHHHHHHHHHHH----HHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGG
T ss_pred HHHHHHHHH-hcccc-----------chhhHHHHHHHHHHh----hhccccccchHHHHHHHHHHhhhhccccchhhhhh
Confidence 000000000 00000 000000000000000 000000000000000 00000000
Q ss_pred -----HHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhc
Q 004396 367 -----ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (756)
Q Consensus 367 -----~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (756)
...+....+.+|++|+++|+|++|.+++++. ++.+.+.+|++++++++++||+++.|+|+++++.|.++
T Consensus 219 ~~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~~ 292 (297)
T d1q0ra_ 219 YSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPH-GKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVILAH 292 (297)
T ss_dssp GGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTH-HHHHHHTSTTEEEEEETTCCSSCCGGGHHHHHHHHHHH
T ss_pred hhhhhccccchhhhhccCCceEEEEeCCCCCCCHHH-HHHHHHhCCCCEEEEECCCCCcchhhCHHHHHHHHHHH
Confidence 0001125678899999999999999999995 99999999999999999999999999999999999843
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.94 E-value=4e-26 Score=235.74 Aligned_cols=253 Identities=13% Similarity=0.114 Sum_probs=157.7
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----------ChhHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGLV 225 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----------s~~~~a 225 (756)
+..+|.. ++|.+.|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| ++++++
T Consensus 13 ~~~~~~~---l~y~~~G~----gp~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~a 85 (293)
T d1ehya_ 13 VQLPDVK---IHYVREGA----GPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAA 85 (293)
T ss_dssp EECSSCE---EEEEEEEC----SSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGCHHHHH
T ss_pred EEECCEE---EEEEEECC----CCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCcccCCccccccccccccchhhh
Confidence 3345554 57888887 79999999999999999999999988999999999999987 468899
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhH
Q 004396 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (756)
Q Consensus 226 ~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (756)
+|+.+++++++.. +++++||||||.+|+.+|.++|+++.++|++++....................... ......
T Consensus 86 ~~~~~~~~~l~~~----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 160 (293)
T d1ehya_ 86 DDQAALLDALGIE----KAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQF-HQLDMA 160 (293)
T ss_dssp HHHHHHHHHTTCC----CEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHH-TTCHHH
T ss_pred hHHHhhhhhcCcc----ccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhh-hccchh
Confidence 9999999987655 89999999999999999999999999999999865321111100000000000000 000000
Q ss_pred hhhhcCChhHHH---H---H--hhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHH-----h
Q 004396 306 LSYVMGDPIKMA---M---V--NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA-----N 372 (756)
Q Consensus 306 ~~~~~~~~~~~~---~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 372 (756)
............ . . ................. ..............+....... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (293)
T d1ehya_ 161 VEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVD-------------NCMKPDNIHGGFNYYRANIRPDAALWTD 227 (293)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHH-------------HHTSTTHHHHHHHHHHHHSSSSCCCCCT
T ss_pred hhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhh-------------ccccchhhhhhhhhhhhccccchhhhhh
Confidence 000000000000 0 0 00000000000000000 0001111111111111110000 1
Q ss_pred hhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 373 SRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 373 ~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
.....+++|+++|+|++|.+++.+...+.+.+..+++++++++++||++++|+|+.+++.|+
T Consensus 228 ~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~~~I~ 289 (293)
T d1ehya_ 228 LDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIK 289 (293)
T ss_dssp GGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHH
T ss_pred hhhhccCCceEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHH
Confidence 12345789999999999999998853455677889999999999999999999999999998
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.94 E-value=4.7e-27 Score=240.40 Aligned_cols=247 Identities=18% Similarity=0.199 Sum_probs=162.1
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhh---HHHhHhhhcCCcEEEEeccCCCCCC--------ChhHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLG---LILHHKPLGKAFEVRCLHIPVYDRT--------PFEGL 224 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~---~~~~~~~L~~gy~Vi~~Dl~G~G~S--------s~~~~ 224 (756)
.++.+|.. ++|.+.|+ +|+|||+||++++... |..+++.|+++|+|+++|+||||.| +.+++
T Consensus 7 ~i~~~G~~---~~Y~~~G~----G~pvvllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~ 79 (271)
T d1uk8a_ 7 SILAAGVL---TNYHDVGE----GQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSW 79 (271)
T ss_dssp EEEETTEE---EEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHH
T ss_pred EEEECCEE---EEEEEEee----CCeEEEECCCCCCccHHHHHHHHHHHHhCCCEEEEEeCCCCCCcccccccccccccc
Confidence 44567765 68888987 7899999999876554 5567888889999999999999998 37889
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHh
Q 004396 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (756)
Q Consensus 225 a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (756)
++++..++++++.+ +++|+||||||.+|+.+|.++|+.+.++|++++........ ..........+.. .....
T Consensus 80 ~~~~~~~~~~l~~~----~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~ 152 (271)
T d1uk8a_ 80 VDHIIGIMDALEIE----KAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVT-EGLNAVWGYTPSI--ENMRN 152 (271)
T ss_dssp HHHHHHHHHHTTCC----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCC-HHHHHHHTCCSCH--HHHHH
T ss_pred chhhhhhhhhhcCC----CceEeeccccceeehHHHHhhhccchheeecccCCCcccch-hhhhhhhhccchh--HHHHH
Confidence 99999999987655 89999999999999999999999999999999865321111 0010111111100 00111
Q ss_pred HhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhh-hhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEE
Q 004396 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSV-MSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVL 383 (756)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 383 (756)
.+........ ... ............. ..... ...........+ .... ....+.+.++++|+|
T Consensus 153 ~~~~~~~~~~---------~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~l~~i~~P~l 215 (271)
T d1uk8a_ 153 LLDIFAYDRS---------LVT-DELARLRYEASIQ--PGFQESFSSMFPEPRQRW-IDAL----ASSDEDIKTLPNETL 215 (271)
T ss_dssp HHHHHCSCGG---------GCC-HHHHHHHHHHHTS--TTHHHHHHTTSCSSTHHH-HHHH----CCCHHHHTTCCSCEE
T ss_pred HHHHHhhhcc---------cch-hHHHHHHHhhhhc--hhHHHHHHhhcchhhhhh-hhhc----cccHHHHHhhcccee
Confidence 1111111110 000 0000000000000 00000 000011111111 1111 111256789999999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 384 VLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 384 vI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
+|+|++|.++|.+. .+.+.+.++++++++++++||++++|+|+++++.|.
T Consensus 216 ii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 265 (271)
T d1uk8a_ 216 IIHGREDQVVPLSS-SLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVV 265 (271)
T ss_dssp EEEETTCSSSCHHH-HHHHHHHCTTEEEEEESSCCSCHHHHTHHHHHHHHH
T ss_pred EEecCCCCCcCHHH-HHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHH
Confidence 99999999999995 999999999999999999999999999999999997
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.94 E-value=5.5e-26 Score=234.32 Aligned_cols=237 Identities=16% Similarity=0.134 Sum_probs=156.9
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhh----hcCCcEEEEeccCCCCCCC--------hhHHHHHHHHHHHH
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKP----LGKAFEVRCLHIPVYDRTP--------FEGLVKFVEETVRR 234 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~----L~~gy~Vi~~Dl~G~G~Ss--------~~~~a~dv~~~i~~ 234 (756)
++|.+.|+ +|+|||+||++++...|..+... +.++|+|+++|+||||.|+ ..++++++.+++++
T Consensus 22 i~y~~~G~----G~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i~~li~~ 97 (283)
T d2rhwa1 22 IHYNEAGN----GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDA 97 (283)
T ss_dssp EEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHH
T ss_pred EEEEEEcC----CCeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhhccccccc
Confidence 67888887 78999999999999988765433 3789999999999999882 55678999999999
Q ss_pred hhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHH----HHhHHhHhhhhc
Q 004396 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDEL----HCAVPYLLSYVM 310 (756)
Q Consensus 235 l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 310 (756)
++.. +++++||||||.+|+.+|.++|+.++++|+++|....................... .......+....
T Consensus 98 l~~~----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (283)
T d2rhwa1 98 LDID----RAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFL 173 (283)
T ss_dssp HTCC----CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHC
T ss_pred cccc----ccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHHHHHhh
Confidence 7765 89999999999999999999999999999999865322211111111111111100 000111111111
Q ss_pred CChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHH-HHHHH--HHHHHhhhccCCCCcEEEEEe
Q 004396 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKL-KLLKS--ASAYANSRLHAVKAEVLVLAS 387 (756)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~l~~i~~PvLvI~G 387 (756)
... .... .+........+.. ......... ..... ...+....+.++++|+++|+|
T Consensus 174 ~~~---------~~~~-~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 231 (283)
T d2rhwa1 174 YDQ---------SLIT-EELLQGRWEAIQR------------QPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWG 231 (283)
T ss_dssp SCG---------GGCC-HHHHHHHHHHHHH------------CHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEE
T ss_pred ccc---------ccCc-HHHHHHHHHHhhh------------hhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEe
Confidence 110 0000 0111111110000 000000000 00000 000123667889999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 388 GKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 388 ~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
++|.+++.+. ++.+.+.++++++++++++||++++|+|+++++.|.
T Consensus 232 ~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 277 (283)
T d2rhwa1 232 RDDRFVPLDH-GLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVI 277 (283)
T ss_dssp TTCSSSCTHH-HHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHH
T ss_pred CCCCCcCHHH-HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 9999999995 999999999999999999999999999999999988
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.94 E-value=1.2e-26 Score=237.61 Aligned_cols=244 Identities=12% Similarity=0.103 Sum_probs=154.0
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhcc
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHAS 238 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~ 238 (756)
++|.+.|+ +|+|||+||++++...|..+++.| +++|+|+++|+||||.| +++++++|+.+++++++.+
T Consensus 15 i~y~~~G~----G~~ivllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~~~ 90 (277)
T d1brta_ 15 LYYEDHGT----GQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQ 90 (277)
T ss_dssp EEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEEcc----CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccccccchhhhhhhhhhhhhccCcc
Confidence 46778887 789999999999999999999988 67899999999999998 5899999999999998765
Q ss_pred CCCCCEEEEEeChhh-HHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCc-----hhHHhhchhHHHHhHHhHhhhhcCC
Q 004396 239 SPEKPIYLVGDSFGG-CLALAVAARNPTIDLILILSNPATSFGRSQLQPL-----FPILKAMPDELHCAVPYLLSYVMGD 312 (756)
Q Consensus 239 ~~~~~v~LvGhS~GG-~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (756)
+++|+|||||| .++..+|..+|++++++|++++............ ......+...........+......
T Consensus 91 ----~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (277)
T d1brta_ 91 ----DAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFND 166 (277)
T ss_dssp ----SEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred ----cccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhhhcccc
Confidence 89999999996 5566677888999999999987653322111100 0011111000000000000000000
Q ss_pred hhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCC
Q 004396 313 PIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNM 392 (756)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~ 392 (756)
... ........... .......... .................+....+.++++|+++|+|++|.+
T Consensus 167 ~~~-~~~~~~~~~~~-~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~ 230 (277)
T d1brta_ 167 FYN-LDENLGTRISE-EAVRNSWNTA--------------ASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRT 230 (277)
T ss_dssp HTT-HHHHBTTTBCH-HHHHHHHHHH--------------HHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSS
T ss_pred ccc-cchhhhhhhhH-HHhhhhhccc--------------chhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCC
Confidence 000 00000000000 0000000000 0000000000000000011356788999999999999999
Q ss_pred CCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 393 LPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 393 vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
++.+...+.+.+.+|++++++++++||++++|+|+++++.|.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 272 (277)
T d1brta_ 231 LPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALL 272 (277)
T ss_dssp SCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHH
T ss_pred cCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 988743566788899999999999999999999999999998
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=3.3e-26 Score=240.28 Aligned_cols=257 Identities=14% Similarity=0.136 Sum_probs=164.7
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC---------ChhHHHH
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT---------PFEGLVK 226 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S---------s~~~~a~ 226 (756)
...||.. ++|.+.|+ +|+|||+||++++...|..+++.| .++|+|+++|+||||.| +++++++
T Consensus 17 ~~~~g~~---i~y~~~G~----gp~vlllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 89 (322)
T d1zd3a2 17 TVKPRVR---LHFVELGS----GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCK 89 (322)
T ss_dssp EEETTEE---EEEEEECC----SSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGGSHHHHHH
T ss_pred EECCCCE---EEEEEEcC----CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEeccccccccccccccccccccccch
Confidence 3456655 68888887 799999999999999999999999 56899999999999988 4788999
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhh----------chh
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKA----------MPD 296 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~----------~~~ 296 (756)
++.+++++++.+ +++++||||||.+++.+|.++|+++.++|+++++................. .+.
T Consensus 90 ~i~~l~~~l~~~----~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (322)
T d1zd3a2 90 EMVTFLDKLGLS----QAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPG 165 (322)
T ss_dssp HHHHHHHHHTCS----CEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHHHHTTSTT
T ss_pred hhhhhhhccccc----ccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhHHhhhccc
Confidence 999999997765 899999999999999999999999999999987553322222111110000 000
Q ss_pred HHH----HhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHH---------
Q 004396 297 ELH----CAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKL--------- 363 (756)
Q Consensus 297 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 363 (756)
... ......+........ ................... .....................
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (322)
T d1zd3a2 166 VAEAELEQNLSRTFKSLFRASD-------ESVLSMHKVCEAGGLFVNS--PEEPSLSRMVTEEEIQFYVQQFKKSGFRGP 236 (322)
T ss_dssp HHHHHHHHTHHHHHHHHSCCTT-------SCCCCTTSHHHHTSSSTTS--CSSCCCCTTCCHHHHHHHHHHHHHHTTHHH
T ss_pred hhhhhhhhhHHHHHHHHhhccc-------hhhhhHHHHhhhhcccccc--ccchhhhhhccHHHHHHHHHHHhhcccccc
Confidence 000 000000100000000 0000000000000000000 000000000011111111100
Q ss_pred -------HHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 364 -------LKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 364 -------~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
...........+.++++|+|+|+|++|.+++++. .+.+.+.++++++++++++||++++|+|+++++.|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~ 313 (322)
T d1zd3a2 237 LNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQM-SQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILI 313 (322)
T ss_dssp HHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGG-GTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred cccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHH-HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 0011122235668899999999999999999995 888999999999999999999999999999999988
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.94 E-value=4.3e-26 Score=233.17 Aligned_cols=256 Identities=14% Similarity=0.087 Sum_probs=162.9
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVK 226 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~ 226 (756)
.+.+.||.. ++|...|. +++|+|||+||++++...|..+++.| +++|+|+++|+||||.| +++++++
T Consensus 2 ~i~~~dG~~---l~y~~~G~--~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 76 (275)
T d1a88a_ 2 TVTTSDGTN---IFYKDWGP--RDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAA 76 (275)
T ss_dssp EEECTTSCE---EEEEEESC--TTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred EEEecCCCE---EEEEEecC--CCCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccccccccccc
Confidence 356778876 57777786 35789999999999999999999988 78999999999999988 5899999
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeCh-hhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCc----hhHHhhchhHHHHh
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSF-GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL----FPILKAMPDELHCA 301 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~-GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~----~~~~~~~~~~~~~~ 301 (756)
|+.+++++++.+ +++++|||+ ||.++..+|.++|++|+++|++++............ ......+.......
T Consensus 77 ~~~~~l~~l~~~----~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (275)
T d1a88a_ 77 DVAALTEALDLR----GAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAAN 152 (275)
T ss_dssp HHHHHHHHHTCC----SEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHC
T ss_pred cccccccccccc----ccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhhh
Confidence 999999998665 789999997 666777788999999999999997653222211110 11111111111000
Q ss_pred HHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH-HHHHhhhccCCCC
Q 004396 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHAVKA 380 (756)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~ 380 (756)
....+......... ..................... . .............. .....+.+.++++
T Consensus 153 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----------~----~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 216 (275)
T d1a88a_ 153 RAQFYIDVPSGPFY--GFNREGATVSQGLIDHWWLQG----------M----MGAANAHYECIAAFSETDFTDDLKRIDV 216 (275)
T ss_dssp HHHHHHHHHHTTTT--TTTSTTCCCCHHHHHHHHHHH----------H----HSCHHHHHHHHHHHHHCCCHHHHHHCCS
T ss_pred hHHHHHhhhhhhhh--hcccchhhHHHHHHHHHHHhh----------c----ccchHHHHHHHHHhhhhhhhHHHHhhcc
Confidence 00000000000000 000000000000000000000 0 00000111111110 0111255678999
Q ss_pred cEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 381 EVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 381 PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|+|+|+|++|.++|.+...+.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 217 P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 271 (275)
T d1a88a_ 217 PVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLA 271 (275)
T ss_dssp CEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHH
T ss_pred ccceeecCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 9999999999999886435677888999999999999999999999999999883
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.3e-26 Score=235.68 Aligned_cols=241 Identities=17% Similarity=0.177 Sum_probs=152.4
Q ss_pred eeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC---hhHHHHHHHHHHHHhhccCCCCCE
Q 004396 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---FEGLVKFVEETVRREHASSPEKPI 244 (756)
Q Consensus 168 ~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss---~~~~a~dv~~~i~~l~~~~~~~~v 244 (756)
+|...|+ +.++|||+||++++...|..+++.|+++|+|+++|+||||.|+ ..++.+. .+.+..+. .+++
T Consensus 3 ~y~~~G~---g~~~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~d~-~~~~~~~~----~~~~ 74 (256)
T d1m33a_ 3 WWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADM-AEAVLQQA----PDKA 74 (256)
T ss_dssp CEEEECC---CSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSCCCCCHHHH-HHHHHTTS----CSSE
T ss_pred EEEEECC---CCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEeCCCCCCcccccccccccc-cccccccc----ccce
Confidence 5666676 4689999999999999999999999999999999999999993 3333333 33333322 3489
Q ss_pred EEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCC-cCCch-hHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhh
Q 004396 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQ-LQPLF-PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIE 322 (756)
Q Consensus 245 ~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (756)
+++||||||.+++.+|.++|+.+++++++++...+.... +.... .....+...........+....... ..
T Consensus 75 ~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 147 (256)
T d1m33a_ 75 IWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQ-------TM 147 (256)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTT-------ST
T ss_pred eeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhhh-------hc
Confidence 999999999999999999999999999998765443322 11111 1111111111111111110000000 00
Q ss_pred cCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHH
Q 004396 323 NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (756)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l 402 (756)
...........+...... ........+......+.. .+..+.+.++++|+++|+|++|.++|.+. ++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lii~G~~D~~~p~~~-~~~l 216 (256)
T d1m33a_ 148 GTETARQDARALKKTVLA--------LPMPEVDVLNGGLEILKT--VDLRQPLQNVSMPFLRLYGYLDGLVPRKV-VPML 216 (256)
T ss_dssp TSTTHHHHHHHHHHHHHT--------SCCCCHHHHHHHHHHHHH--CCCTTGGGGCCSCEEEEEETTCSSSCGGG-CC-C
T ss_pred cccchhhHHHHHHHhhhh--------cchhhHHHHHhhhhhhcc--cchHHHHHhccCCccccccccCCCCCHHH-HHHH
Confidence 000000011111110000 000111111111111111 11246788999999999999999999985 8899
Q ss_pred HHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 403 NNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 403 ~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
.+.+|++++++++++||++++|+|+++++.|.
T Consensus 217 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 248 (256)
T d1m33a_ 217 DKLWPHSESYIFAKAAHAPFISHPAEFCHLLV 248 (256)
T ss_dssp TTTCTTCEEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred HHHCCCCEEEEECCCCCchHHHCHHHHHHHHH
Confidence 99999999999999999999999999999998
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.93 E-value=3.3e-26 Score=235.16 Aligned_cols=250 Identities=18% Similarity=0.207 Sum_probs=156.7
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVK 226 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~ 226 (756)
++..||.. ++|...|++ +++|+|||+||++++...|...+..+ +++|+|+++|+||||.| +++++++
T Consensus 6 ~~~~~g~~---i~y~~~g~~-~~~~~iv~lHG~~g~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 81 (290)
T d1mtza_ 6 YAKVNGIY---IYYKLCKAP-EEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVE 81 (290)
T ss_dssp EEEETTEE---EEEEEECCS-SCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHH
T ss_pred eEEECCEE---EEEEEcCCC-CCCCeEEEECCCCCchHHHHHHHHHHHHCCCEEEEEeCCCCccccccccccccccchhh
Confidence 44556765 467777763 45689999999988888887777666 77899999999999998 4788999
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHh
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (756)
|+.++++++.. .++++|+||||||.+|+.+|.++|++|+++|++++........ .................+....
T Consensus 82 ~l~~ll~~l~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 157 (290)
T d1mtza_ 82 EAEALRSKLFG---NEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTV-KEMNRLIDELPAKYRDAIKKYG 157 (290)
T ss_dssp HHHHHHHHHHT---TCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHH-HHHHHHHHTSCHHHHHHHHHHH
T ss_pred hhhhhhccccc---ccccceecccccchhhhhhhhcChhhheeeeecccccCcccch-hhhhhhhhhhhHHHHHHHHHhh
Confidence 99999998642 2389999999999999999999999999999998755221100 0000011111111110010000
Q ss_pred hh-hcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHH-----HH-------------
Q 004396 307 SY-VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-----SA------------- 367 (756)
Q Consensus 307 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------------- 367 (756)
.. ...++.. .......... . .................... ..
T Consensus 158 ~~~~~~~~~~---------------~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (290)
T d1mtza_ 158 SSGSYENPEY---------------QEAVNYFYHQ---H-LLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIK 218 (290)
T ss_dssp HHTCTTCHHH---------------HHHHHHHHHH---H-TSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTT
T ss_pred hhccccchhH---------------HHHHHHHhhh---h-hcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhh
Confidence 00 0000000 0000000000 0 00000000100000000000 00
Q ss_pred HHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 368 SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 368 ~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
..+....+.++++|+++|+|++|.++| + .++.+.+.++++++++++++||++++|+|+++++.|.
T Consensus 219 ~~~~~~~~~~i~~P~l~i~G~~D~~~~-~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 283 (290)
T d1mtza_ 219 DWDITDKISAIKIPTLITVGEYDEVTP-N-VARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLS 283 (290)
T ss_dssp TCBCTTTGGGCCSCEEEEEETTCSSCH-H-HHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred cccHHHHhhcccceEEEEEeCCCCCCH-H-HHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHH
Confidence 000124567889999999999998875 5 3888999999999999999999999999999999988
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.93 E-value=4.6e-26 Score=233.70 Aligned_cols=248 Identities=14% Similarity=0.119 Sum_probs=155.5
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhcc
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHAS 238 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~ 238 (756)
++|.+.|+ +|+|||+||++++...|..+++.| +++|+|+++|+||||.| +++++++|+.+++++++..
T Consensus 15 i~y~~~G~----g~~illlHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di~~~i~~l~~~ 90 (279)
T d1hkha_ 15 LYYEDQGS----GQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETLDLR 90 (279)
T ss_dssp EEEEEESS----SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEEcc----CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEechhhCCccccccccchhhhhhhhhhhhhhcCcC
Confidence 57788887 789999999999999999999887 88999999999999998 5899999999999998765
Q ss_pred CCCCCEEEEEeChhh-HHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch----hHHhhchhHHHHhHHhHhhhhcCCh
Q 004396 239 SPEKPIYLVGDSFGG-CLALAVAARNPTIDLILILSNPATSFGRSQLQPLF----PILKAMPDELHCAVPYLLSYVMGDP 313 (756)
Q Consensus 239 ~~~~~v~LvGhS~GG-~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (756)
+++|+|||||| .++..+|..+|+++.++|++++............. .....+..........++.......
T Consensus 91 ----~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (279)
T d1hkha_ 91 ----DVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNF 166 (279)
T ss_dssp ----SEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ----ccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhhhhhhhhh
Confidence 89999999996 56666777889999999999876533222111110 1111110000000000000000000
Q ss_pred hHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCC
Q 004396 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNML 393 (756)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~v 393 (756)
.. ............ ......... .................... ...+.+..+++|+++++|++|.++
T Consensus 167 ~~-~~~~~~~~~~~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~G~~D~~~ 233 (279)
T d1hkha_ 167 YN-LDENLGSRISEQ-AVTGSWNVA----------IGSAPVAAYAVVPAWIEDFR-SDVEAVRAAGKPTLILHGTKDNIL 233 (279)
T ss_dssp HT-HHHHBTTTBCHH-HHHHHHHHH----------HTSCTTHHHHTHHHHTCBCH-HHHHHHHHHCCCEEEEEETTCSSS
T ss_pred cc-cchhhhhhhhhh-hhhhhhhhh----------cccchhhhhhhhhhhhcccc-cchhhhcccCCceEEEEcCCCCcc
Confidence 00 000000001000 000000000 00000001110000000000 112445678899999999999999
Q ss_pred CCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 394 PSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 394 p~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
+.+...+.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 234 ~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~v~~~i~~ 275 (279)
T d1hkha_ 234 PIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKT 275 (279)
T ss_dssp CTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 865336788889999999999999999999999999999873
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.93 E-value=1.9e-25 Score=227.33 Aligned_cols=254 Identities=13% Similarity=0.129 Sum_probs=161.0
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVK 226 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~ 226 (756)
++++.||.. ++|.+.|+ +|+|||+||++++...|..+++.| +++|+|+++|+||||.| +++++++
T Consensus 2 ~f~~~dG~~---l~y~~~G~----g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 74 (271)
T d1va4a_ 2 TFVAKDGTQ---IYFKDWGS----GKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFAD 74 (271)
T ss_dssp EEECTTSCE---EEEEEESS----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred EEEeECCeE---EEEEEEcC----CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccccccccccc
Confidence 467788877 57778887 688999999999999999999999 56899999999999988 5899999
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHH-HHHHhCCCcceEEEEeCCCCcCCcCCcC--Cc--hhHHhhchhHHHHh
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLAL-AVAARNPTIDLILILSNPATSFGRSQLQ--PL--FPILKAMPDELHCA 301 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl-~~A~~~P~~v~~lVLi~p~~~~~~~~~~--~~--~~~~~~~~~~~~~~ 301 (756)
++.++++.++.+ +++++|||+||.+++ .+|..+|+++.+++++++.......... .. ..............
T Consensus 75 ~~~~~~~~~~~~----~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (271)
T d1va4a_ 75 DIAQLIEHLDLK----EVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKD 150 (271)
T ss_dssp HHHHHHHHHTCC----SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHH
T ss_pred cceeeeeecCCC----cceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhhh
Confidence 999999997765 899999999887655 4567789999999999876533222111 10 01111110000000
Q ss_pred HHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH-HHHHhhhccCCCC
Q 004396 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHAVKA 380 (756)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~ 380 (756)
.......... . ...................... ...........+... ..+....+.++++
T Consensus 151 ~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 212 (271)
T d1va4a_ 151 RAQFISDFNA-P---FYGINKGQVVSQGVQTQTLQIA--------------LLASLKATVDCVTAFAETDFRPDMAKIDV 212 (271)
T ss_dssp HHHHHHHHHH-H---HHTGGGTCCCCHHHHHHHHHHH--------------HHSCHHHHHHHHHHHHHCCCHHHHHHCCS
T ss_pred hhhhhhhhcc-h---hhcccchhhhhhhHHHHHHhhh--------------hhhhhhhhhhcccccchhhhhhhhhhccc
Confidence 0000000000 0 0000000000000000000000 000111111111110 0111256778999
Q ss_pred cEEEEEeCCCCCCCCHHHHHHH-HHhCCCeEEEEEcCCCCcccccchhhHHHHhhhccccc
Q 004396 381 EVLVLASGKDNMLPSEDEAKRL-NNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (756)
Q Consensus 381 PvLvI~G~~D~~vp~~~~~~~l-~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~r 440 (756)
|+++++|++|.+++.+. ..++ .+..+++++++++++||++++|+|+++++.|. .|++
T Consensus 213 Pvl~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fL~ 270 (271)
T d1va4a_ 213 PTLVIHGDGDQIVPFET-TGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLL--AFLK 270 (271)
T ss_dssp CEEEEEETTCSSSCGGG-THHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHH--HHHT
T ss_pred ceeecccCCCCCCCHHH-HHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHC
Confidence 99999999999999885 5554 56779999999999999999999999999988 4444
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.93 E-value=1e-25 Score=236.11 Aligned_cols=254 Identities=14% Similarity=0.107 Sum_probs=162.1
Q ss_pred CCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC---------ChhHHHHHH
Q 004396 159 PDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT---------PFEGLVKFV 228 (756)
Q Consensus 159 ~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S---------s~~~~a~dv 228 (756)
.||.. ++|.+.|++ ++.|+|||+||+++++..|..++..| ..+|+|+++|+||||.| +++++++|+
T Consensus 31 ~~g~~---~~y~~~G~~-~~~p~llllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~l 106 (310)
T d1b6ga_ 31 YPGLR---AHYLDEGNS-DAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFL 106 (310)
T ss_dssp CTTCE---EEEEEEECT-TCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHH
T ss_pred CCCEE---EEEEEecCC-CCCCEEEEECCCCCchHHHHHHHHHhhccCceEEEeeecCccccccccccccccccccccch
Confidence 35544 577788763 45789999999999999999999998 57899999999999998 588999999
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhh
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSY 308 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (756)
.+++++++.+ +++|+||||||.+|+.+|.++|++|+++|++++......................... .. ...
T Consensus 107 ~~~l~~l~~~----~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~ 179 (310)
T d1b6ga_ 107 LALIERLDLR----NITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTA-WK--YDL 179 (310)
T ss_dssp HHHHHHHTCC----SEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHH-HH--HHH
T ss_pred hhhhhhcccc----ccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhhh-hh--hhh
Confidence 9999998766 8999999999999999999999999999999987633222211111111110000000 00 000
Q ss_pred hcCCh--hHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHH-------HHHHHHHHHHhhhccCCC
Q 004396 309 VMGDP--IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKL-------KLLKSASAYANSRLHAVK 379 (756)
Q Consensus 309 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~i~ 379 (756)
..... ............... ....+...+... ........+.. .............+..++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (310)
T d1b6ga_ 180 VTPSDLRLDQFMKRWAPTLTEA-EASAYAAPFPDT---------SYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWN 249 (310)
T ss_dssp HSCSSCCHHHHHHHHSTTCCHH-HHHHHHTTCSSG---------GGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCC
T ss_pred ccchhhhhhhhhhccCccccHH-HHHHHHhhcchh---------hhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccC
Confidence 00000 000000000111110 000000000000 00000000000 000001111123456789
Q ss_pred CcEEEEEeCCCCCCCCHHHHHHHHHhCCCe-EEEEEcCCCCcccccchhhHHHHhh
Q 004396 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNC-IVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 380 ~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~-~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
+|+++++|++|.+++++. .+.+.+.+++. ++++++++||++++|+|+.+++.|+
T Consensus 250 ~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~ 304 (310)
T d1b6ga_ 250 GQTFMAIGMKDKLLGPDV-MYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALK 304 (310)
T ss_dssp SEEEEEEETTCSSSSHHH-HHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCCCHHH-HHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHHH
Confidence 999999999999999985 89999999876 7889999999999999999999998
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.93 E-value=2.4e-25 Score=234.24 Aligned_cols=264 Identities=13% Similarity=0.053 Sum_probs=159.0
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC---------ChhHHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT---------PFEGLV 225 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S---------s~~~~a 225 (756)
.+...||.. ++|.+.|++ ++|+|||+||++++...|......++++|+|+++|+||||.| ++++++
T Consensus 15 ~i~~~dg~~---i~y~~~G~~--~g~pvvllHG~~g~~~~~~~~~~~l~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~ 89 (313)
T d1azwa_ 15 SLKVDDRHT---LYFEQCGNP--HGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLV 89 (313)
T ss_dssp EEECSSSCE---EEEEEEECT--TSEEEEEECSTTTTCCCGGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHHHHH
T ss_pred EEEeCCCcE---EEEEEecCC--CCCEEEEECCCCCCccchHHHhHHhhcCCEEEEEeccccCCCCccccccchhHHHHH
Confidence 344556655 588888863 578899999999998888877777788999999999999999 488999
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchh-HHHHhHHh
Q 004396 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD-ELHCAVPY 304 (756)
Q Consensus 226 ~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 304 (756)
+|+.+++++++.+ +++|+||||||.+++.+|.++|++++++|++++........ ......... .....+..
T Consensus 90 ~dl~~~~~~l~~~----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 161 (313)
T d1azwa_ 90 ADIERLRTHLGVD----RWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFEL----EWFYQEGASRLFPDAWEH 161 (313)
T ss_dssp HHHHHHHHHTTCS----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHH----HHHHTSSHHHHCHHHHHH
T ss_pred HHHHHHHHhhccc----cceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccch----hhhhhcccchhhhHHHHH
Confidence 9999999997766 89999999999999999999999999999999865332110 000000000 00000011
Q ss_pred Hhhhh---cCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhh------hhhhhccCChhhHHHHHHHHHHH--------
Q 004396 305 LLSYV---MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPR------LSVMSDIIPKDTLLWKLKLLKSA-------- 367 (756)
Q Consensus 305 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------- 367 (756)
..... ................... ............... .......................
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
T d1azwa_ 162 YLNAIPPVERADLMSAFHRRLTSDDEA-TRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFF 240 (313)
T ss_dssp HHHTSCGGGTTSHHHHHHHHHTCSCHH-HHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGC
T ss_pred HHHhhhhhhhhhhhhhhhhhhcCccHH-HHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHHhhcccc
Confidence 00000 0000000000000000000 000000000000000 00000000000000000000000
Q ss_pred ---HHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 368 ---SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 368 ---~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
..........+++|+|+|+|++|.++|++. ++.+.+.+|++++++++++||+++ +|+.++++|+.
T Consensus 241 ~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~-~~~l~~~~p~a~~~~i~~aGH~~~--ep~~~~~li~a 308 (313)
T d1azwa_ 241 EVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQS-AWDLHKAWPKAQLQISPASGHSAF--EPENVDALVRA 308 (313)
T ss_dssp SSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHH-HHHHHHHCTTSEEEEETTCCSSTT--SHHHHHHHHHH
T ss_pred ccchhhhHhhhhcCCCCEEEEEECCCCCCCHHH-HHHHHHHCCCCEEEEECCCCCCCC--CchHHHHHHHH
Confidence 001124456789999999999999999995 999999999999999999999975 47777766654
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.93 E-value=3.2e-25 Score=226.36 Aligned_cols=253 Identities=11% Similarity=0.035 Sum_probs=159.4
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVK 226 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~ 226 (756)
.+.+.||.. ++|.+.|+ +|+|||+||++++...|..+++.| +++|+|+++|+||||.| +++++++
T Consensus 2 ~f~~~dG~~---i~y~~~G~----g~pvvllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 74 (273)
T d1a8sa_ 2 TFTTRDGTQ---IYYKDWGS----GQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYAD 74 (273)
T ss_dssp EEECTTSCE---EEEEEESC----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred EEEeeCCcE---EEEEEECC----CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEechhcCccccccccccccchHH
Confidence 456778876 57788887 688999999999999999999999 68899999999999998 5899999
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHH-HHhCCCcceEEEEeCCCCcCCcCCcCC----chhHHhhchhHHHHh
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAV-AARNPTIDLILILSNPATSFGRSQLQP----LFPILKAMPDELHCA 301 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~-A~~~P~~v~~lVLi~p~~~~~~~~~~~----~~~~~~~~~~~~~~~ 301 (756)
|+.+++++++.. +.+++|||+||.+++.+ |..+|+++.+++++++........... ...............
T Consensus 75 ~~~~~l~~l~~~----~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (273)
T d1a8sa_ 75 DLAQLIEHLDLR----DAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLAD 150 (273)
T ss_dssp HHHHHHHHTTCC----SEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcc----ceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHH
Confidence 999999997655 78999999988665554 556799999999998765332221111 111111111100000
Q ss_pred HHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHH-HHHHhhhccCCCC
Q 004396 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHAVKA 380 (756)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~ 380 (756)
....+......... ...................... .....+........ ..+....+.++++
T Consensus 151 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 214 (273)
T d1a8sa_ 151 RSQLYKDLASGPFF--GFNQPGAKSSAGMVDWFWLQGM--------------AAGHKNAYDCIKAFSETDFTEDLKKIDV 214 (273)
T ss_dssp HHHHHHHHHHTTSS--STTSTTCCCCHHHHHHHHHHHH--------------HSCHHHHHHHHHHHHHCCCHHHHHTCCS
T ss_pred HHHHHHHHhhhhhh--hcccchhhhhHHHHHHHHHhhc--------------ccchhhhhhhHHHhhhhhhhHHHHhhcc
Confidence 00011000000000 0000000000000110000000 00001111111111 1112356788999
Q ss_pred cEEEEEeCCCCCCCCHHHHHHHH-HhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 381 EVLVLASGKDNMLPSEDEAKRLN-NSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 381 PvLvI~G~~D~~vp~~~~~~~l~-~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
|+++|+|++|.++|.+. .+.+. +..+++++++++++||++++|+|+++++.|.+
T Consensus 215 Pvlii~g~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 269 (273)
T d1a8sa_ 215 PTLVVHGDADQVVPIEA-SGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLA 269 (273)
T ss_dssp CEEEEEETTCSSSCSTT-THHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHH
T ss_pred ceEEEecCCCCCCCHHH-HHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 99999999999999884 55554 55689999999999999999999999999873
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.92 E-value=9.7e-25 Score=224.41 Aligned_cols=265 Identities=11% Similarity=-0.002 Sum_probs=155.7
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC-----------hhH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-----------FEG 223 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss-----------~~~ 223 (756)
.+++.+|.. ++|.+.|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.|+ ..+
T Consensus 11 ~fi~~~g~~---i~y~~~G~----g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~ 83 (298)
T d1mj5a_ 11 KFIEIKGRR---MAYIDEGT----GDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAE 83 (298)
T ss_dssp EEEEETTEE---EEEEEESC----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHH
T ss_pred EEEEECCEE---EEEEEEcC----CCcEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCccccccccccch
Confidence 345557765 67888887 789999999999999999999999999999999999999983 334
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHH
Q 004396 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303 (756)
Q Consensus 224 ~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (756)
..+++..++... ...++++++||||||.+++.+|.++|+++.+++++++.................. .. ......
T Consensus 84 ~~~~~~~~~~~~---~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~ 158 (298)
T d1mj5a_ 84 HRDYLDALWEAL---DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLF-QA-FRSQAG 158 (298)
T ss_dssp HHHHHHHHHHHT---TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHH-HH-HHSTTH
T ss_pred hhhhhccccccc---cccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhh-hh-hhhhhh
Confidence 444444444432 3345899999999999999999999999999999987653322211111000000 00 000000
Q ss_pred hHhhhhcCChhH-HHHHhhhcCCChHHHHHHHHhhhhhhh----hhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCC
Q 004396 304 YLLSYVMGDPIK-MAMVNIENRLPPRIKLEQLSNNLPALL----PRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAV 378 (756)
Q Consensus 304 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 378 (756)
..... ...... ........................... .................. ..........+..+
T Consensus 159 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 233 (298)
T d1mj5a_ 159 EELVL-QDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADV----VAIARDYAGWLSES 233 (298)
T ss_dssp HHHHT-TTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHH----HHHHHHHHHHHTTC
T ss_pred hhhhh-hhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhh----hhhhhhhhhhhhhc
Confidence 00000 000000 000000000000000001100000000 000000000000011111 11111223667889
Q ss_pred CCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 379 ~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
++|+++++|++|.+.+.. .+.+.+.+|++++++++ +||++++|+|+++++.|. .|+++
T Consensus 234 ~~P~l~i~g~~d~~~~~~--~~~~~~~~p~~~~~~~~-~GH~~~~e~P~~v~~~i~--~fl~~ 291 (298)
T d1mj5a_ 234 PIPKLFINAEPGALTTGR--MRDFCRTWPNQTEITVA-GAHFIQEDSPDEIGAAIA--AFVRR 291 (298)
T ss_dssp CSCEEEEEEEECSSSSHH--HHHHHTTCSSEEEEEEE-ESSCGGGTCHHHHHHHHH--HHHHH
T ss_pred ceeEEEEecCCCCcChHH--HHHHHHHCCCCEEEEeC-CCCchHHhCHHHHHHHHH--HHHhh
Confidence 999999999999876543 78889999999887765 699999999999999998 56655
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.91 E-value=7e-25 Score=219.82 Aligned_cols=235 Identities=12% Similarity=0.065 Sum_probs=148.1
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGh 249 (756)
+++|||+||+++++..|..+++.| ++||+|+++|+||||.| ++++++.++..+++... ...+++++||
T Consensus 2 G~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvgh 78 (258)
T d1xkla_ 2 GKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLS---ADEKVILVGH 78 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSC---SSSCEEEEEE
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhccc---cccccccccc
Confidence 578999999999999999999999 56899999999999998 36677777777777643 3358999999
Q ss_pred ChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHH
Q 004396 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (756)
Q Consensus 250 S~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (756)
||||.+++.++.++|+++.++|++++............................. ......... ......... .
T Consensus 79 S~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~-~ 152 (258)
T d1xkla_ 79 SLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQ--FLPYGSPEE---PLTSMFFGP-K 152 (258)
T ss_dssp TTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCE--EEECSCTTS---CCEEEECCH-H
T ss_pred chhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhh--hhhhhhhhh---hcccccccH-H
Confidence 9999999999999999999999999865332222111110000000000000000 000000000 000000000 0
Q ss_pred HHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHH-------HHH-HHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHH
Q 004396 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKL-------LKS-ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKR 401 (756)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~ 401 (756)
....... .............. ... ........+..+++|+++|+|++|.++|++. .+.
T Consensus 153 ~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~ 218 (258)
T d1xkla_ 153 FLAHKLY-------------QLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEF-QRW 218 (258)
T ss_dssp HHHHHTS-------------TTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHH-HHH
T ss_pred HHHHHhh-------------hcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHH-HHH
Confidence 0000000 00000000000000 000 0001124556788999999999999999995 999
Q ss_pred HHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhc
Q 004396 402 LNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (756)
Q Consensus 402 l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (756)
+.+.++++++++++++||++++|+|+++++.|.+.
T Consensus 219 ~~~~~~~~~~~~i~~~gH~~~~e~P~~~~~~l~e~ 253 (258)
T d1xkla_ 219 QIDNIGVTEAIEIKGADHMAMLCEPQKLCASLLEI 253 (258)
T ss_dssp HHHHHCCSEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence 99999999999999999999999999999999854
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.91 E-value=6.9e-24 Score=219.30 Aligned_cols=267 Identities=15% Similarity=0.049 Sum_probs=158.9
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC---------ChhHHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT---------PFEGLVK 226 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S---------s~~~~a~ 226 (756)
+...||.. ++|.+.|++ ++|+|||+||+++++..|..+...|+++|+|+++|+||||.| +..++++
T Consensus 16 v~~~dG~~---i~y~~~G~~--~g~pvvllHG~~~~~~~w~~~~~~l~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 90 (313)
T d1wm1a_ 16 LDTGDGHR---IYWELSGNP--NGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVA 90 (313)
T ss_dssp EECSSSCE---EEEEEEECT--TSEEEEEECCTTTCCCCGGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHHHHHH
T ss_pred EEeCCCcE---EEEEEecCC--CCCeEEEECCCCCcccchHHHHHHhhcCCEEEEEeCCCcccccccccccccchhhHHH
Confidence 44457766 688888874 578999999999999999999999999999999999999998 3678889
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHh
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (756)
|+..+++++... +++++|||+||.+++.+|..+|+++.+++++++...............................
T Consensus 91 d~~~~~~~~~~~----~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (313)
T d1wm1a_ 91 DIERLREMAGVE----QWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSIL 166 (313)
T ss_dssp HHHHHHHHTTCS----SEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTTS
T ss_pred HHHhhhhccCCC----cceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccccccchhhhhhhhhhhhhh
Confidence 999999986655 8999999999999999999999999999999876522100000000000000000000000000
Q ss_pred -hhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhh---ccCChhhHHHHHHHHH--H-----------HHH
Q 004396 307 -SYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMS---DIIPKDTLLWKLKLLK--S-----------ASA 369 (756)
Q Consensus 307 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~-----------~~~ 369 (756)
............. ....... ..................... ................ . ...
T Consensus 167 ~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
T d1wm1a_ 167 SDDERKDVIAAYRQ-RLTSADP-QVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQ 244 (313)
T ss_dssp CTTGGGCHHHHHHH-HHTCSCH-HHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTH
T ss_pred hhhhhhhhhhhhhh-cccchhh-hhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhhhhhhhhhhhcccccchh
Confidence 0000000000000 0000000 000000000000000000000 0000000000000000 0 001
Q ss_pred HHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhhc
Q 004396 370 YANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (756)
Q Consensus 370 ~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (756)
.....+..+++|+++|+|++|.++|++. ++.+.+.+|++++++++++||++ ++|+.++++|+..
T Consensus 245 ~~~~~~~~~~~Pvlii~G~~D~~~p~~~-~~~l~~~~p~a~~~~i~~aGH~~--~eP~~~~~lv~a~ 308 (313)
T d1wm1a_ 245 LLRNVPLIRHIPAVIVHGRYDMACQVQN-AWDLAKAWPEAELHIVEGAGHSY--DEPGILHQLMIAT 308 (313)
T ss_dssp HHHTGGGGTTSCEEEEEETTCSSSCHHH-HHHHHHHCTTSEEEEETTCCSST--TSHHHHHHHHHHH
T ss_pred hhhhhhhhCCCCEEEEEECCCCccCHHH-HHHHHHHCCCCEEEEECCCCCCc--CCchHHHHHHHHH
Confidence 1124556789999999999999999995 99999999999999999999964 4688888887643
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.90 E-value=2.1e-24 Score=216.87 Aligned_cols=238 Identities=13% Similarity=0.047 Sum_probs=146.0
Q ss_pred EEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeCh
Q 004396 181 TLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGDSF 251 (756)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~ 251 (756)
-.||+||+++++..|..+++.| .++|+|+++|+||||.| +++++++++.++++++.. .++++|+||||
T Consensus 4 ~~vliHG~~~~~~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~lvGhS~ 80 (256)
T d3c70a1 4 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPP---GEKVILVGESC 80 (256)
T ss_dssp EEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHSCT---TCCEEEEEETT
T ss_pred cEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhhcc---ccceeecccch
Confidence 3689999999999999999999 56799999999999998 478899999998877432 34899999999
Q ss_pred hhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHH-hhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHH
Q 004396 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPIL-KAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (756)
Q Consensus 252 GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (756)
||.+++.+|.++|++++++|++++................ ........ ........... . ...........
T Consensus 81 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~----~~~~~~~~~~~ 152 (256)
T d3c70a1 81 GGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKD---TTYFTYTKDGK-E----ITGLKLGFTLL 152 (256)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTT---CEEEEEEETTE-E----EEEEECCHHHH
T ss_pred HHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhh---hHHHhhhcccc-c----cchhhhhhhhh
Confidence 9999999999999999999999975532221111110000 00000000 00000000000 0 00000000000
Q ss_pred HHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeE
Q 004396 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (756)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~ 410 (756)
.................... ........ .. ...........+++|+++|+|++|.+++++. .+.+.+.+|+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~--~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~-~~~~~~~~p~~~ 225 (256)
T d3c70a1 153 RENLYTLCGPEEYELAKMLT-RKGSLFQN---IL--AKRPFFTKEGYGSIKKIYVWTDQDEIFLPEF-QLWQIENYKPDK 225 (256)
T ss_dssp HHHTSTTSCHHHHHHHHHHC-CCBCCCHH---HH--TTSCCCCTTTGGGSCEEEEECTTCSSSCHHH-HHHHHHHSCCSE
T ss_pred hhhhhhhcchhhHHHhhhhh-hhhhHHHh---hh--hhcchhhhhhccccceeEEeecCCCCCCHHH-HHHHHHHCCCCE
Confidence 00000000000000000000 00000000 00 0000012334567999999999999999995 899999999999
Q ss_pred EEEEcCCCCcccccchhhHHHHhhhc
Q 004396 411 VRNFKDNGHTLLLEEGISLLTIIKGT 436 (756)
Q Consensus 411 l~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (756)
+++++|+||++++|+|+++++.|.+.
T Consensus 226 ~~~i~~agH~~~~e~P~~~~~~l~~~ 251 (256)
T d3c70a1 226 VYKVEGGDHKLQLTKTKEIAEILQEV 251 (256)
T ss_dssp EEECCSCCSCHHHHSHHHHHHHHHHH
T ss_pred EEEECCCCCchHHhCHHHHHHHHHHH
Confidence 99999999999999999999999854
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.7e-24 Score=214.23 Aligned_cols=180 Identities=16% Similarity=0.118 Sum_probs=141.4
Q ss_pred cccCCCCCceeeeeccCCCC-CCCCCEEEEECCCCCchhhHHH--hHhhh-cCCcEEEEeccCCCCCCC---------hh
Q 004396 156 IIKPDGGPPRWFCPVDCGRP-LKGSPTLLFLPGIDGLGLGLIL--HHKPL-GKAFEVRCLHIPVYDRTP---------FE 222 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~-~~~~p~lV~lHG~~~s~~~~~~--~~~~L-~~gy~Vi~~Dl~G~G~Ss---------~~ 222 (756)
.+..+|.. ++|.+.+.. .+++|+|||+||++++...|.. +++.| .++|+|+++|+||||.|+ ..
T Consensus 10 ~i~v~G~~---i~y~~~~~~~~~~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~~~~~~ 86 (208)
T d1imja_ 10 TIQVQGQA---LFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGEL 86 (208)
T ss_dssp CEEETTEE---ECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTSC
T ss_pred EEEECCEE---EEEEEecCCCCCCCCeEEEECCCCCChhHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCcccccchh
Confidence 34456655 344433221 2357899999999999999987 35777 678999999999999882 34
Q ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhH
Q 004396 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAV 302 (756)
Q Consensus 223 ~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (756)
+.++++.++++.++.. +++|+||||||.+|+.+|.++|++++++|+++|....
T Consensus 87 ~~~~~l~~~~~~l~~~----~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~----------------------- 139 (208)
T d1imja_ 87 APGSFLAAVVDALELG----PPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD----------------------- 139 (208)
T ss_dssp CCTHHHHHHHHHHTCC----SCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG-----------------------
T ss_pred hhhhhhhhcccccccc----cccccccCcHHHHHHHHHHHhhhhcceeeecCccccc-----------------------
Confidence 5567788888887665 8899999999999999999999999999999873210
Q ss_pred HhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcE
Q 004396 303 PYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEV 382 (756)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 382 (756)
. . . .+.+.++++|+
T Consensus 140 -~--------------------~-------------~--------------------------------~~~~~~i~~P~ 153 (208)
T d1imja_ 140 -K--------------------I-------------N--------------------------------AANYASVKTPA 153 (208)
T ss_dssp -G--------------------S-------------C--------------------------------HHHHHTCCSCE
T ss_pred -c--------------------c-------------c--------------------------------ccccccccccc
Confidence 0 0 0 02345788999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 383 LVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 383 LvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
|+|+|++|.++|.+ . +..+.++++++.+++++||..++|+|+++++.+.
T Consensus 154 Lii~G~~D~~~~~~--~-~~~~~~~~~~~~~i~~~gH~~~~~~p~~~~~~l~ 202 (208)
T d1imja_ 154 LIVYGDQDPMGQTS--F-EHLKQLPNHRVLIMKGAGHPCYLDKPEEWHTGLL 202 (208)
T ss_dssp EEEEETTCHHHHHH--H-HHHTTSSSEEEEEETTCCTTHHHHCHHHHHHHHH
T ss_pred ccccCCcCcCCcHH--H-HHHHhCCCCeEEEECCCCCchhhhCHHHHHHHHH
Confidence 99999999988754 2 4456789999999999999999999999999987
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.87 E-value=3.2e-22 Score=200.92 Aligned_cols=238 Identities=18% Similarity=0.156 Sum_probs=133.8
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhc-CCcEEEEeccCCCCCCC------hhHHHHHHHHHHHHhhccC
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASS 239 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~gy~Vi~~Dl~G~G~Ss------~~~~a~dv~~~i~~l~~~~ 239 (756)
++|...++ ++|+|||+||++++...|..+++.|+ .+|+|+++|+||||.|+ ......+...... ....
T Consensus 7 lh~~~~~~---~~P~ivllHG~~~~~~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~--~~~~ 81 (264)
T d1r3da_ 7 LHFAKPTA---RTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQ--AHVT 81 (264)
T ss_dssp EESSCCBT---TBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHHH--TTCC
T ss_pred EEEcCCCC---CCCeEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccccccchhhhhhhhccc--cccc
Confidence 45655544 57899999999999999999999995 58999999999999983 1122222222211 1223
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhH-----HhHhhhhcCChh
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAV-----PYLLSYVMGDPI 314 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 314 (756)
..++++++||||||.+|+.+|.++|+.+.+++++.+........................... ...........
T Consensus 82 ~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 160 (264)
T d1r3da_ 82 SEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQA- 160 (264)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSG-
T ss_pred ccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-
Confidence 456899999999999999999999999999888765442211111000000000000000000 00000000000
Q ss_pred HHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHH-HHHHHhhhccCCCCcEEEEEeCCCCCC
Q 004396 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS-ASAYANSRLHAVKAEVLVLASGKDNML 393 (756)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLvI~G~~D~~v 393 (756)
....... ............ ............... ........+..+++|+++|+|++|..+
T Consensus 161 ------~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~ 222 (264)
T d1r3da_ 161 ------VFSSLNH-EQRQTLIAQRSA-----------NLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF 222 (264)
T ss_dssp ------GGTTCCH-HHHHHHHHHHTT-----------SCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH
T ss_pred ------hhcccch-HHHHHHHHHHhh-----------hhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHH
Confidence 0000000 000000000000 000000000000000 000012456789999999999999533
Q ss_pred CCHHHHHHHHHhCCCeEEEEEcCCCCcccccchhhHHHHhhh
Q 004396 394 PSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 394 p~~~~~~~l~~~l~~~~l~~i~~aGH~~~~e~p~~~~~~I~~ 435 (756)
..+.+ .+++++++++++||++++|+|+++++.|.+
T Consensus 223 ------~~~~~-~~~~~~~~i~~~gH~~~~e~P~~~~~~i~~ 257 (264)
T d1r3da_ 223 ------QQLAE-SSGLSYSQVAQAGHNVHHEQPQAFAKIVQA 257 (264)
T ss_dssp ------HHHHH-HHCSEEEEETTCCSCHHHHCHHHHHHHHHH
T ss_pred ------HHHHh-cCCCeEEEECCCCCchHHHCHHHHHHHHHH
Confidence 33333 368999999999999999999999999983
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.86 E-value=6.1e-21 Score=188.68 Aligned_cols=213 Identities=15% Similarity=0.139 Sum_probs=136.5
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
+++|||+||++++...|..+++.| ++||+|+++|+||||.| ...+..+++..++..+... ..++++|+|||
T Consensus 11 ~~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S 89 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK-GYEKIAVAGLS 89 (242)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH-TCCCEEEEEET
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhhc-ccCceEEEEcc
Confidence 578999999999999999999999 56899999999999988 3455555555555443322 23489999999
Q ss_pred hhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHH
Q 004396 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (756)
Q Consensus 251 ~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (756)
|||.+++.++.++|... +++++++...... .......... ........ .......
T Consensus 90 ~Gg~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~----~~~~~~~~--------------~~~~~~~ 144 (242)
T d1tqha_ 90 LGGVFSLKLGYTVPIEG--IVTMCAPMYIKSE-----ETMYEGVLEY----AREYKKRE--------------GKSEEQI 144 (242)
T ss_dssp HHHHHHHHHHTTSCCSC--EEEESCCSSCCCH-----HHHHHHHHHH----HHHHHHHH--------------TCCHHHH
T ss_pred hHHHHhhhhcccCcccc--cccccccccccch-----hHHHHHHHHH----HHHHhhhc--------------cchhhhH
Confidence 99999999999998654 5566554422111 0011100000 00000000 0000000
Q ss_pred HHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhC--CC
Q 004396 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL--QN 408 (756)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l--~~ 408 (756)
...... .. . .......... .........+..+++|+|+++|++|.+++.+. ++.+.+.+ ++
T Consensus 145 ~~~~~~-~~----------~-~~~~~~~~~~----~~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~-~~~~~~~~~~~~ 207 (242)
T d1tqha_ 145 EQEMEK-FK----------Q-TPMKTLKALQ----ELIADVRDHLDLIYAPTFVVQARHDEMINPDS-ANIIYNEIESPV 207 (242)
T ss_dssp HHHHHH-HT----------T-SCCTTHHHHH----HHHHHHHHTGGGCCSCEEEEEETTCSSSCTTH-HHHHHHHCCCSS
T ss_pred HHHHhh-hh----------h-hccchhhccc----ccccccccccceeccccceeecccCCccCHHH-HHHHHHHcCCCC
Confidence 000000 00 0 0000111111 11111236778899999999999999999995 99999887 57
Q ss_pred eEEEEEcCCCCccccc-chhhHHHHhh
Q 004396 409 CIVRNFKDNGHTLLLE-EGISLLTIIK 434 (756)
Q Consensus 409 ~~l~~i~~aGH~~~~e-~p~~~~~~I~ 434 (756)
+++++++++||++++| +++.+++.|.
T Consensus 208 ~~~~~~~~~gH~~~~~~~~~~~~~~i~ 234 (242)
T d1tqha_ 208 KQIKWYEQSGHVITLDQEKDQLHEDIY 234 (242)
T ss_dssp EEEEEETTCCSSGGGSTTHHHHHHHHH
T ss_pred cEEEEECCCCCcCccccCHHHHHHHHH
Confidence 8999999999999987 5888888887
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.85 E-value=1.3e-21 Score=212.83 Aligned_cols=140 Identities=10% Similarity=0.079 Sum_probs=116.5
Q ss_pred hhhHHHHhcCCCCccHHHHHHhhcccc-cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcC-C---
Q 004396 131 EELEVLWDDGYGTDSVKDYLDAAKEII-KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK-A--- 205 (756)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~-g--- 205 (756)
..+-..|.++|..+..++.+.+-..+. +-||..+.+++.... .+++++|||+||++++...|..+++.|++ +
T Consensus 60 ~~l~~~w~~~~dw~~~e~~ln~~~~f~~~i~G~~iHf~h~~~~---~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~ 136 (394)
T d1qo7a_ 60 TTMREKWLSEFDWRPFEARLNSFPQFTTEIEGLTIHFAALFSE---REDAVPIALLHGWPGSFVEFYPILQLFREEYTPE 136 (394)
T ss_dssp HHHHHHHHHTCCHHHHHHHHTTSCEEEEEETTEEEEEEEECCS---CTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTT
T ss_pred HHHHHHhhhcCCHHHHHHHHHcCCCeEEEECCEEEEEEEEecc---CCCCCEEEEeccccccHHHHHHHHHhhccccCCc
Confidence 346678999999888888887666664 458877544444332 34789999999999999999999999953 3
Q ss_pred ---cEEEEeccCCCCCC---------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEe
Q 004396 206 ---FEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILS 273 (756)
Q Consensus 206 ---y~Vi~~Dl~G~G~S---------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi 273 (756)
|+|+++|+||||.| +..++++++..+++.++.. +++++|||+||.++..+++.+|+.+.+++++
T Consensus 137 ~~~f~VIaPDLpG~G~S~~P~~~~~y~~~~~a~~~~~l~~~lg~~----~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~ 212 (394)
T d1qo7a_ 137 TLPFHLVVPSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFG----SGYIIQGGDIGSFVGRLLGVGFDACKAVHLN 212 (394)
T ss_dssp TCCEEEEEECCTTSTTSCCCCSSSCCCHHHHHHHHHHHHHHTTCT----TCEEEEECTHHHHHHHHHHHHCTTEEEEEES
T ss_pred ccceeeecccccccCCCCCCCCCCccCHHHHHHHHHHHHhhccCc----ceEEEEecCchhHHHHHHHHhhccccceeEe
Confidence 99999999999998 3788999999999997665 8899999999999999999999999999998
Q ss_pred CCCC
Q 004396 274 NPAT 277 (756)
Q Consensus 274 ~p~~ 277 (756)
+...
T Consensus 213 ~~~~ 216 (394)
T d1qo7a_ 213 LCAM 216 (394)
T ss_dssp CCCC
T ss_pred eecc
Confidence 7655
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.85 E-value=5.2e-21 Score=204.57 Aligned_cols=125 Identities=13% Similarity=0.056 Sum_probs=89.5
Q ss_pred hhcccccCCCCCceeee--eccCCC-CCCCCCEEEEECCCCCchhhHHH------hHhhh-cCCcEEEEeccCCCCCCC-
Q 004396 152 AAKEIIKPDGGPPRWFC--PVDCGR-PLKGSPTLLFLPGIDGLGLGLIL------HHKPL-GKAFEVRCLHIPVYDRTP- 220 (756)
Q Consensus 152 ~~~~~~~~dg~~~~~~~--~~~~G~-~~~~~p~lV~lHG~~~s~~~~~~------~~~~L-~~gy~Vi~~Dl~G~G~Ss- 220 (756)
+...+.+.||..+.... +.+.+. ....+|+|||+||+++++..|.. ++..| .+||+|+++|+||||.|+
T Consensus 28 e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G~S~~ 107 (377)
T d1k8qa_ 28 EEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARR 107 (377)
T ss_dssp EEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCE
T ss_pred eEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCCCCCC
Confidence 34567788986643332 222222 13457899999999999999965 44556 689999999999999983
Q ss_pred ---------------hhHH-HHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCC
Q 004396 221 ---------------FEGL-VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPA 276 (756)
Q Consensus 221 ---------------~~~~-a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~ 276 (756)
++++ ..|+.++++.+....+.++++|+||||||.+++.+|.++|+.++++++++..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~ 179 (377)
T d1k8qa_ 108 NLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYAL 179 (377)
T ss_dssp ESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEE
T ss_pred CCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeec
Confidence 3333 2355555555444344559999999999999999999999988887775543
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.85 E-value=1e-20 Score=197.91 Aligned_cols=261 Identities=12% Similarity=0.068 Sum_probs=158.1
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCC-CCC-------ChhHHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVY-DRT-------PFEGLVK 226 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~-G~S-------s~~~~a~ 226 (756)
+...||..++...+.+.+...+.+++||++||++++...|..+++.| ++||+|+++|+||| |.| ++.++.+
T Consensus 9 ~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~~~~~~~~~ 88 (302)
T d1thta_ 9 LRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKN 88 (302)
T ss_dssp EEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------CCCHHHHHH
T ss_pred EEcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccCCCHHHHHH
Confidence 34567766554444444433345789999999999999999999999 67899999999998 777 4778889
Q ss_pred HHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHh
Q 004396 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (756)
Q Consensus 227 dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (756)
|+.++++.+.... ..+++|+||||||.+|+.+|.. ..++++|+.+|..... ... ...+........
T Consensus 89 dl~~vi~~l~~~~-~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~--------~~~---~~~~~~~~~~~~ 154 (302)
T d1thta_ 89 SLCTVYHWLQTKG-TQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLR--------DTL---EKALGFDYLSLP 154 (302)
T ss_dssp HHHHHHHHHHHTT-CCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHH--------HHH---HHHHSSCGGGSC
T ss_pred HHHHHHHhhhccC-CceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHH--------HHH---HHHHhhccchhh
Confidence 9999988886543 3489999999999999988865 4588999988755310 000 000000000000
Q ss_pred hhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEE
Q 004396 307 SYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLA 386 (756)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~ 386 (756)
......... ..... .....+..+... ...+. .....+.+.++++|+|+++
T Consensus 155 ~~~~~~~~~------~~~~~--~~~~~~~~~~~~-----------~~~~~-----------~~~~~~~~~~i~~PvLii~ 204 (302)
T d1thta_ 155 IDELPNDLD------FEGHK--LGSEVFVRDCFE-----------HHWDT-----------LDSTLDKVANTSVPLIAFT 204 (302)
T ss_dssp GGGCCSEEE------ETTEE--EEHHHHHHHHHH-----------TTCSS-----------HHHHHHHHTTCCSCEEEEE
T ss_pred hhhcccccc------ccccc--hhhHHHHHHHHH-----------hHHHH-----------HHHHHHHHhhcCCCEEEEE
Confidence 000000000 00000 000000000000 00000 0112356789999999999
Q ss_pred eCCCCCCCCHHHHHHHHHhCC--CeEEEEEcCCCCcccccchhhHHHHhhhc---cccccCcCcccccccCCCCHHHHHH
Q 004396 387 SGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIKGT---CKYRRSRKLDSVADFLPPSRQEFKY 461 (756)
Q Consensus 387 G~~D~~vp~~~~~~~l~~~l~--~~~l~~i~~aGH~~~~e~p~~~~~~I~~~---~f~rr~~~~~~v~d~~pPs~~e~~~ 461 (756)
|++|.+++.+. ++.+.+.++ ++++++++|+||.+. |+++.+...+++. .........+...++..|..++...
T Consensus 205 G~~D~~V~~~~-~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 282 (302)
T d1thta_ 205 ANNDDWVKQEE-VYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLRNFYQSVTKAAIAMDGGSLEIDVDFIEPDFEQLTI 282 (302)
T ss_dssp ETTCTTSCHHH-HHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCHHHHHH
T ss_pred eCCCCccCHHH-HHHHHHhCCCCCceEEEecCCCcccc-cChHHHHHHHHHHHHHHhhhcccccccccccCCccHHhhhh
Confidence 99999999995 999999885 689999999999875 5555433333322 1111122334445677788776654
Q ss_pred H
Q 004396 462 A 462 (756)
Q Consensus 462 ~ 462 (756)
.
T Consensus 283 ~ 283 (302)
T d1thta_ 283 A 283 (302)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=9.9e-21 Score=191.04 Aligned_cols=94 Identities=12% Similarity=0.061 Sum_probs=84.3
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcC---CcEEEEeccCCCCCC------ChhHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGK---AFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~---gy~Vi~~Dl~G~G~S------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGh 249 (756)
.|||||+||++++...|..+++.|++ +|+|+++|+||||.| +++++++++.++++.+. ++++|+||
T Consensus 2 ~~PvvllHG~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~~~~~~~~~~l~~~l~~l~-----~~~~lvGh 76 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMAKAP-----QGVHLICY 76 (268)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHHHHHHHHHHHHHHHHHHCT-----TCEEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCccccCHHHHHHHHHHHHhccC-----CeEEEEcc
Confidence 46688999999999999999999943 699999999999999 48888999999998854 48999999
Q ss_pred ChhhHHHHHHHHhCCC-cceEEEEeCCCC
Q 004396 250 SFGGCLALAVAARNPT-IDLILILSNPAT 277 (756)
Q Consensus 250 S~GG~vAl~~A~~~P~-~v~~lVLi~p~~ 277 (756)
||||.+|+.+|.++|+ +|+++|+++++.
T Consensus 77 S~GG~ia~~~a~~~p~~~v~~lvl~~~~~ 105 (268)
T d1pjaa_ 77 SQGGLVCRALLSVMDDHNVDSFISLSSPQ 105 (268)
T ss_dssp THHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred ccHHHHHHHHHHHCCccccceEEEECCCC
Confidence 9999999999999998 699999998754
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.77 E-value=7.4e-19 Score=169.47 Aligned_cols=163 Identities=16% Similarity=0.145 Sum_probs=116.6
Q ss_pred CEEEEECCCCCchhh--HHHhHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHH
Q 004396 180 PTLLFLPGIDGLGLG--LILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (756)
Q Consensus 180 p~lV~lHG~~~s~~~--~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vA 256 (756)
..||++||++++... +..+.+.| ++||+|+++|+||+|.+..+++++.+...++. ...+++|+||||||.++
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~~~~~~~~~l~~~~~~-----~~~~~~lvGhS~Gg~~a 76 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPRLEDWLDTLSLYQHT-----LHENTYLVAHSLGCPAI 76 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCCHHHHHHHHHTTGGG-----CCTTEEEEEETTHHHHH
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcchHHHHHHHHHHHHhc-----cCCCcEEEEechhhHHH
Confidence 359999999998765 66778888 77999999999999999999888877766543 23489999999999999
Q ss_pred HHHHHhCCCcc--eEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHH
Q 004396 257 LAVAARNPTID--LILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQL 334 (756)
Q Consensus 257 l~~A~~~P~~v--~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (756)
+.++.++|+.. .+++...+........ . . ........
T Consensus 77 ~~~a~~~~~~~~~~~l~~~~~~~~~~~~~--~-----------------~-~~~~~~~~--------------------- 115 (186)
T d1uxoa_ 77 LRFLEHLQLRAALGGIILVSGFAKSLPTL--Q-----------------M-LDEFTQGS--------------------- 115 (186)
T ss_dssp HHHHHTCCCSSCEEEEEEETCCSSCCTTC--G-----------------G-GGGGTCSC---------------------
T ss_pred HHHHHhCCccceeeEEeecccccccchhh--h-----------------h-hhhhhccc---------------------
Confidence 99999998754 4444444322110000 0 0 00000000
Q ss_pred HhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEEE
Q 004396 335 SNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNF 414 (756)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~i 414 (756)
.. . ....++.+|+++|+|++|.++|.+. ++.+++.+ +++++++
T Consensus 116 -----------------~~---~---------------~~~~~~~~p~lvi~g~~D~~vp~~~-~~~l~~~~-~~~~~~~ 158 (186)
T d1uxoa_ 116 -----------------FD---H---------------QKIIESAKHRAVIASKDDQIVPFSF-SKDLAQQI-DAALYEV 158 (186)
T ss_dssp -----------------CC---H---------------HHHHHHEEEEEEEEETTCSSSCHHH-HHHHHHHT-TCEEEEE
T ss_pred -----------------cc---c---------------cccccCCCCEEEEecCCCCCCCHHH-HHHHHHHc-CCEEEEe
Confidence 00 0 0112235799999999999999995 99999888 7899999
Q ss_pred cCCCCcccccc
Q 004396 415 KDNGHTLLLEE 425 (756)
Q Consensus 415 ~~aGH~~~~e~ 425 (756)
+++||+...+.
T Consensus 159 ~~~gH~~~~~~ 169 (186)
T d1uxoa_ 159 QHGGHFLEDEG 169 (186)
T ss_dssp TTCTTSCGGGT
T ss_pred CCCCCcCcccc
Confidence 99999877653
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=4.4e-18 Score=172.78 Aligned_cols=111 Identities=16% Similarity=0.281 Sum_probs=82.8
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-ChhHHHHHHHHHHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-PFEGLVKFVEETVR 233 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-s~~~~a~dv~~~i~ 233 (756)
.+..++|.. +.+...++ .++++|||+||++++...|..+++.| +++|+++|+||+|.| ++++++++..+.+.
T Consensus 6 ~~~~~~~~~---l~~l~~~~--~~~~Pl~l~Hg~~gs~~~~~~l~~~L--~~~v~~~d~~g~~~~~~~~~~a~~~~~~~~ 78 (286)
T d1xkta_ 6 LLVNPEGPT---LMRLNSVQ--SSERPLFLVHPIEGSTTVFHSLASRL--SIPTYGLQCTRAAPLDSIHSLAAYYIDCIR 78 (286)
T ss_dssp SCCCTTSCS---EEECCCCC--CCSCCEEEECCTTCCCGGGHHHHHTC--SSCEEEECCCTTSCCSCHHHHHHHHHHHHH
T ss_pred HhcCCCCCE---EEEecCCC--CCCCeEEEECCCCccHHHHHHHHHHc--CCeEEEEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 344566654 23444433 23566999999999999999999999 478999999999988 68888887766655
Q ss_pred HhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCC
Q 004396 234 REHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (756)
Q Consensus 234 ~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p 275 (756)
.. .+.++++|+||||||.+|+.+|.++|+++.++++++.
T Consensus 79 ~~---~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~ 117 (286)
T d1xkta_ 79 QV---QPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNS 117 (286)
T ss_dssp HH---CCSSCCEEEEETHHHHHHHHHHHHHHHC------CCE
T ss_pred Hh---cCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEEE
Confidence 53 3345899999999999999999999999888877654
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.73 E-value=4.7e-17 Score=160.43 Aligned_cols=161 Identities=17% Similarity=0.175 Sum_probs=123.2
Q ss_pred CCEEEEECCC---CCchh--hHHHhHhhh-cCCcEEEEeccCCCCCC-----ChhHHHHHHHHHHHHhhccCCCCCEEEE
Q 004396 179 SPTLLFLPGI---DGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLV 247 (756)
Q Consensus 179 ~p~lV~lHG~---~~s~~--~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i~~l~~~~~~~~v~Lv 247 (756)
.+++|++|+. |++.. .+..+++.| +.||.|+.+|+||+|.| +....++|+.++++.+....+..+++++
T Consensus 35 ~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~~~~~~~~D~~a~~~~~~~~~~~~~v~l~ 114 (218)
T d2fuka1 35 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWLA 114 (218)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccCcCcchHHHHHHHHHHHhhcccCceEEEE
Confidence 4567888844 34332 356778888 67999999999999998 3667788988888888777777899999
Q ss_pred EeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCCh
Q 004396 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (756)
||||||.+++.+|.+. .++++|+++|..... +
T Consensus 115 G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~-------------------------------~--------------- 146 (218)
T d2fuka1 115 GFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW-------------------------------D--------------- 146 (218)
T ss_dssp EETHHHHHHHHHHHHH--CCSEEEEESCCBTTB-------------------------------C---------------
T ss_pred EEcccchhhhhhhccc--ccceEEEeCCcccch-------------------------------h---------------
Confidence 9999999999998874 477999998743100 0
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC
Q 004396 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (756)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~ 407 (756)
.....+.+|+|+|+|++|.++|.+. ++++.+.++
T Consensus 147 ---------------------------------------------~~~~~~~~P~Lvi~G~~D~~vp~~~-~~~l~~~~~ 180 (218)
T d2fuka1 147 ---------------------------------------------FSDVQPPAQWLVIQGDADEIVDPQA-VYDWLETLE 180 (218)
T ss_dssp ---------------------------------------------CTTCCCCSSEEEEEETTCSSSCHHH-HHHHHTTCS
T ss_pred ---------------------------------------------hhccccccceeeEecCCCcCcCHHH-HHHHHHHcc
Confidence 0002346899999999999999995 888887765
Q ss_pred -CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 408 -NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 408 -~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
..++++++|++|+.. ++-+++.+.+.
T Consensus 181 ~~~~l~~i~ga~H~f~-~~~~~l~~~~~ 207 (218)
T d2fuka1 181 QQPTLVRMPDTSHFFH-RKLIDLRGALQ 207 (218)
T ss_dssp SCCEEEEETTCCTTCT-TCHHHHHHHHH
T ss_pred CCceEEEeCCCCCCCC-CCHHHHHHHHH
Confidence 578999999999765 33345666665
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.73 E-value=9e-18 Score=166.75 Aligned_cols=206 Identities=18% Similarity=0.148 Sum_probs=126.3
Q ss_pred CCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~ 258 (756)
+++|||+||++++...|..+++.|. +|.|+++|++|+|. .++++.+.|+++. +.++++|+||||||.+|+.
T Consensus 17 ~~~l~~lhg~~g~~~~~~~la~~L~-~~~v~~~~~~g~~~-----~a~~~~~~i~~~~---~~~~~~lvGhS~GG~vA~~ 87 (230)
T d1jmkc_ 17 EQIIFAFPPVLGYGLMYQNLSSRLP-SYKLCAFDFIEEED-----RLDRYADLIQKLQ---PEGPLTLFGYSAGCSLAFE 87 (230)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHCT-TEEEEEECCCCSTT-----HHHHHHHHHHHHC---CSSCEEEEEETHHHHHHHH
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHCC-CCEEeccCcCCHHH-----HHHHHHHHHHHhC---CCCcEEEEeeccChHHHHH
Confidence 7899999999999999999999995 69999999999874 4555555555543 3458999999999999999
Q ss_pred HHHhCCCc---ceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHH
Q 004396 259 VAARNPTI---DLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLS 335 (756)
Q Consensus 259 ~A~~~P~~---v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (756)
+|.++|++ +..++.+++............ ...... .. +....... .... .....
T Consensus 88 ~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~--~~~~~~-------~~-~~~~~~~~---------~~~~----~~~~~ 144 (230)
T d1jmkc_ 88 AAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGR--TVESDV-------EA-LMNVNRDN---------EALN----SEAVK 144 (230)
T ss_dssp HHHHHHHTTCCEEEEEEESCCEECCCC----------CCH-------HH-HHHHTTTC---------SGGG----SHHHH
T ss_pred HHHhhhhhCccceeeecccccCccchhhhhhh--hhhhhh-------hh-hhhccccc---------cccc----cHHHH
Confidence 99887654 555555554332111110000 000000 00 00000000 0000 00000
Q ss_pred hhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhC-CCeEEEEE
Q 004396 336 NNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL-QNCIVRNF 414 (756)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l-~~~~l~~i 414 (756)
. .+......... ..........+++|+++|+|++|..++.. .....+.. ++.+++++
T Consensus 145 ~-------------------~~~~~~~~~~~-~~~~~~~~~~i~~p~l~i~g~~D~~~~~~--~~~w~~~~~~~~~~~~i 202 (230)
T d1jmkc_ 145 H-------------------GLKQKTHAFYS-YYVNLISTGQVKADIDLLTSGADFDIPEW--LASWEEATTGAYRMKRG 202 (230)
T ss_dssp H-------------------HHHHHHHHHHH-HHHHCCCCSCBSSEEEEEECSSCCCCCTT--EECSGGGBSSCEEEEEC
T ss_pred H-------------------HHHHHHHHHHH-hhhcccccccccCcceeeeecCCcccchh--HHHHHHhccCCcEEEEE
Confidence 0 00000001100 11113566789999999999999999875 33334444 47788889
Q ss_pred cCCCCcccccch--hhHHHHhhhcccccc
Q 004396 415 KDNGHTLLLEEG--ISLLTIIKGTCKYRR 441 (756)
Q Consensus 415 ~~aGH~~~~e~p--~~~~~~I~~~~f~rr 441 (756)
+ +||+.++++| +++++.|. .|++|
T Consensus 203 ~-g~H~~ml~~~~~~~va~~I~--~~L~~ 228 (230)
T d1jmkc_ 203 F-GTHAEMLQGETLDRNAGILL--EFLNT 228 (230)
T ss_dssp S-SCGGGTTSHHHHHHHHHHHH--HHHTC
T ss_pred c-CCChhhcCCccHHHHHHHHH--HHHhh
Confidence 8 5999999877 88999998 45554
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.72 E-value=6.5e-17 Score=172.96 Aligned_cols=212 Identities=17% Similarity=0.156 Sum_probs=133.4
Q ss_pred CCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------ChhHHHHHHHH
Q 004396 160 DGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEE 230 (756)
Q Consensus 160 dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~ 230 (756)
+|..+..+.+.+.|. ...|+||++||++++...+..+.+.| .+||.|+++|+||||.| +++..++.+.+
T Consensus 114 dg~~l~g~l~~P~~~--~~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~~~~~~~~~~v~d 191 (360)
T d2jbwa1 114 DGIPMPVYVRIPEGP--GPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVD 191 (360)
T ss_dssp TTEEEEEEEECCSSS--CCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSCHHHHHHHHHH
T ss_pred CCcccceEEEecCCC--CCceEEEEeCCCCccHHHHHHHHHHHHhcCCEEEEEccccccccCccccccccHHHHHHHHHH
Confidence 444433323333333 24689999999999988888888888 78999999999999987 24555556666
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhc
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (756)
++...... ...+|.|+||||||.+|+.+|+..| +++++|.+++......... ........+.. ..
T Consensus 192 ~l~~~~~v-d~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~---------~~~~~~~~~~~----~~ 256 (360)
T d2jbwa1 192 LLTKLEAI-RNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDL---------ETPLTKESWKY----VS 256 (360)
T ss_dssp HHHHCTTE-EEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGG---------SCHHHHHHHHH----HT
T ss_pred HHHhcccc-cccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhh---------hhhhhhHHHHH----hc
Confidence 65543221 1347999999999999999999887 5889998887553311100 00000000000 00
Q ss_pred CChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCC
Q 004396 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (756)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D 390 (756)
... . .+.... .... .......+.+|+||+|+++|++|
T Consensus 257 ~~~-------------~---~~~~~~-------------------------~~~~--~~~~~~~~~~i~~P~Lii~G~~D 293 (360)
T d2jbwa1 257 KVD-------------T---LEEARL-------------------------HVHA--ALETRDVLSQIACPTYILHGVHD 293 (360)
T ss_dssp TCS-------------S---HHHHHH-------------------------HHHH--HTCCTTTGGGCCSCEEEEEETTS
T ss_pred cCC-------------c---hHHHHH-------------------------HHHh--hcchhhhHhhCCCCEEEEEeCCC
Confidence 000 0 000000 0000 00012457889999999999999
Q ss_pred CCCCCHHHHHHHHHhCC--CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 391 NMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 391 ~~vp~~~~~~~l~~~l~--~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
. +|.+. ++.+.+.++ +.+++++++++|..+ +.+......+.
T Consensus 294 ~-vp~~~-~~~l~~~~~~~~~~l~~~~~g~H~~~-~~~~~~~~~i~ 336 (360)
T d2jbwa1 294 E-VPLSF-VDTVLELVPAEHLNLVVEKDGDHCCH-NLGIRPRLEMA 336 (360)
T ss_dssp S-SCTHH-HHHHHHHSCGGGEEEEEETTCCGGGG-GGTTHHHHHHH
T ss_pred C-cCHHH-HHHHHHhcCCCCeEEEEECCCCcCCC-cChHHHHHHHH
Confidence 8 58885 999999987 567888899999654 44555444443
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.70 E-value=6.2e-17 Score=167.16 Aligned_cols=201 Identities=15% Similarity=0.144 Sum_probs=133.1
Q ss_pred CCCCEEEEECCC--CCchhhHHHhHhhhcCCcEEEEeccCCCCCC----------ChhHHHHHHHHHHHHhhccCCCCCE
Q 004396 177 KGSPTLLFLPGI--DGLGLGLILHHKPLGKAFEVRCLHIPVYDRT----------PFEGLVKFVEETVRREHASSPEKPI 244 (756)
Q Consensus 177 ~~~p~lV~lHG~--~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S----------s~~~~a~dv~~~i~~l~~~~~~~~v 244 (756)
.+.|+|+|+||+ +++...|..+++.|...++|+++|+||||.+ +++++++++.+.|... .+.+++
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y~~la~~L~~~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~---~~~~P~ 134 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRA---AGDAPV 134 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHH---HTTSCE
T ss_pred CCCceEEEeCCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHh---cCCCce
Confidence 357899999995 5677889999999999999999999999875 4778888766654432 234589
Q ss_pred EEEEeChhhHHHHHHHHhC----CCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHh
Q 004396 245 YLVGDSFGGCLALAVAARN----PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVN 320 (756)
Q Consensus 245 ~LvGhS~GG~vAl~~A~~~----P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (756)
+|+||||||.+|+.+|.+. ++.+.++|++++....... .......... ....... .
T Consensus 135 vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~-------~~~~~~~~~~---~~~~~~~---~------- 194 (283)
T d2h7xa1 135 VLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQE-------PIEVWSRQLG---EGLFAGE---L------- 194 (283)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCH-------HHHHTHHHHH---HHHHHTC---S-------
T ss_pred EEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCcccccc-------chhhhhhhhH---HHhhccc---c-------
Confidence 9999999999999999864 4679999999975422110 0000000000 0000000 0
Q ss_pred hhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHH
Q 004396 321 IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAK 400 (756)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~ 400 (756)
.. .....+....... ..........+++|+++++|++|..++.+. ..
T Consensus 195 --~~---------------------------~~~~~l~a~~~~~---~~~~~~~~~~~~~Pvl~i~g~~d~~~~~~~-~~ 241 (283)
T d2h7xa1 195 --EP---------------------------MSDARLLAMGRYA---RFLAGPRPGRSSAPVLLVRASEPLGDWQEE-RG 241 (283)
T ss_dssp --SC---------------------------CCHHHHHHHHHHH---HHHHSCCCCCCCSCEEEEEESSCSSCCCGG-GC
T ss_pred --cc---------------------------cccHHHHHHHHHH---HHHhhccccccCCCeEEEEeCCCCCCCHHH-HH
Confidence 00 0000011000111 111124457789999999999999998884 66
Q ss_pred HHHHhCC-CeEEEEEcCCCCccc-ccchhhHHHHhh
Q 004396 401 RLNNSLQ-NCIVRNFKDNGHTLL-LEEGISLLTIIK 434 (756)
Q Consensus 401 ~l~~~l~-~~~l~~i~~aGH~~~-~e~p~~~~~~I~ 434 (756)
.+.+.++ ..+++.+++ ||+.+ .|+++.+++.|.
T Consensus 242 ~w~~~~~~~~~~~~v~G-~H~~ml~e~~~~vA~~i~ 276 (283)
T d2h7xa1 242 DWRAHWDLPHTVADVPG-DHFTMMRDHAPAVAEAVL 276 (283)
T ss_dssp CCSCCCSSCSEEEEESS-CTTHHHHTTHHHHHHHHH
T ss_pred HHHHhCCCCcEEEEEcC-CCcccccCCHHHHHHHHH
Confidence 6666665 468999996 89865 467899998887
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.68 E-value=1.6e-16 Score=152.32 Aligned_cols=163 Identities=15% Similarity=0.105 Sum_probs=120.3
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHH
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCL 255 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S--s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~v 255 (756)
.|||||+||++++...|..+++.| .++|.|+.+|.+|++.+ +....++++.+.++.+....+.++++||||||||.+
T Consensus 2 ~~PVv~vHG~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvGHSmGG~v 81 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGAN 81 (179)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHcCCeEEEEecCCccccccccchhhhhHHHHHHHHHHhcCCceEEEEeecCcCHH
Confidence 456899999999999999999999 67899999999999988 233344444444444333334458999999999999
Q ss_pred HHHHHHhC--CCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHH
Q 004396 256 ALAVAARN--PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQ 333 (756)
Q Consensus 256 Al~~A~~~--P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (756)
+..++.++ |++|+++|+++++...... . ..
T Consensus 82 a~~~~~~~~~~~~V~~~V~l~~p~~g~~~--~--------------------------------------~l-------- 113 (179)
T d1ispa_ 82 TLYYIKNLDGGNKVANVVTLGGANRLTTG--K--------------------------------------AL-------- 113 (179)
T ss_dssp HHHHHHHSSGGGTEEEEEEESCCGGGTCS--B--------------------------------------CC--------
T ss_pred HHHHHHHcCCchhhCEEEEECCCCCCchh--h--------------------------------------hc--------
Confidence 99999887 5789999999874311000 0 00
Q ss_pred HHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCCeEEEE
Q 004396 334 LSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRN 413 (756)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~~~l~~ 413 (756)
+ .......+|++.|+|+.|.++++.. ..+++++.+.
T Consensus 114 -------------------~-------------------~~~~~~~~~~~~i~~~~D~~v~~~~------~~l~~~~~~~ 149 (179)
T d1ispa_ 114 -------------------P-------------------GTDPNQKILYTSIYSSADMIVMNYL------SRLDGARNVQ 149 (179)
T ss_dssp -------------------C-------------------CSCTTCCCEEEEEEETTCSSSCHHH------HCCBTSEEEE
T ss_pred -------------------C-------------------CcccccCceEEEEEecCCcccCchh------hcCCCceEEE
Confidence 0 0012335799999999999999873 3578999999
Q ss_pred EcCCCCcccccchhhHHHHhh
Q 004396 414 FKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 414 i~~aGH~~~~e~p~~~~~~I~ 434 (756)
++++||..+..+|+ +.+.|.
T Consensus 150 ~~~~~H~~l~~~~~-v~~~i~ 169 (179)
T d1ispa_ 150 IHGVGHIGLLYSSQ-VNSLIK 169 (179)
T ss_dssp ESSCCTGGGGGCHH-HHHHHH
T ss_pred ECCCCchhhccCHH-HHHHHH
Confidence 99999999988885 444444
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.66 E-value=1e-15 Score=159.36 Aligned_cols=223 Identities=16% Similarity=0.098 Sum_probs=136.0
Q ss_pred ccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCC---------------
Q 004396 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP--------------- 220 (756)
Q Consensus 157 ~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss--------------- 220 (756)
.+.||..+...-+.+.+. ...|+||++||++++...|...+..| .+||.|+++|+||||.|+
T Consensus 62 ~~~dg~~i~~~l~~P~~~--~~~P~vv~~HG~~~~~~~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~~~ 139 (318)
T d1l7aa_ 62 KSFGNARITGWYAVPDKE--GPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMT 139 (318)
T ss_dssp EEGGGEEEEEEEEEESSC--SCEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTT
T ss_pred ECCCCcEEEEEEEecCCC--CCceEEEEecCCCCCccchHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccchhhhhcchh
Confidence 345665543333333333 23789999999999999999999888 689999999999999882
Q ss_pred ----------hhHHHHHHHHHHHHhhccCC--CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCch
Q 004396 221 ----------FEGLVKFVEETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF 288 (756)
Q Consensus 221 ----------~~~~a~dv~~~i~~l~~~~~--~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~ 288 (756)
......|....++.+..... ..++.++|+|+||..++..+...++ +.+++...|.... ..
T Consensus 140 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~ 211 (318)
T d1l7aa_ 140 KGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSN-------FE 211 (318)
T ss_dssp TTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCC-------HH
T ss_pred hchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEecccccc-------HH
Confidence 11233444444444433321 2468999999999999999998865 4555555553311 10
Q ss_pred hHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHH
Q 004396 289 PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS 368 (756)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (756)
................... ..... ...... .... ..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~---------------~~~~~-~~~~~~--------------------------~~~~--~~ 247 (318)
T d1l7aa_ 212 RAIDVALEQPYLEINSFFR---------------RNGSP-ETEVQA--------------------------MKTL--SY 247 (318)
T ss_dssp HHHHHCCSTTTTHHHHHHH---------------HSCCH-HHHHHH--------------------------HHHH--HT
T ss_pred HHhhcccccccchhhhhhh---------------ccccc-cccccc--------------------------cccc--cc
Confidence 0110000000000000000 00000 000000 0000 00
Q ss_pred HHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC-CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 369 AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 369 ~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~-~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
......+.+|++|+|+++|++|.++|++. +..+.+.++ +.++++++|+||....+..+++.+.++
T Consensus 248 ~~~~~~~~~i~~P~Lii~G~~D~~vp~~~-~~~~~~~l~~~~~l~~~~~~gH~~~~~~~~~~~~fl~ 313 (318)
T d1l7aa_ 248 FDIMNLADRVKVPVLMSIGLIDKVTPPST-VFAAYNHLETKKELKVYRYFGHEYIPAFQTEKLAFFK 313 (318)
T ss_dssp TCHHHHGGGCCSCEEEEEETTCSSSCHHH-HHHHHHHCCSSEEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred cccccccccCCCCEEEEEECCCCCcCHHH-HHHHHHHcCCCcEEEEECCCCCCCcHHHHHHHHHHHH
Confidence 00124457899999999999999999995 999998887 689999999999887666666655554
|
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=99.65 E-value=6.8e-17 Score=168.01 Aligned_cols=193 Identities=11% Similarity=-0.006 Sum_probs=129.0
Q ss_pred cccCCCCCCCEEEEecCCCchhhHHHHHHHHHHh---cCceeccccccccccccccccCCCccHHHHHHHcCccccCHH-
Q 004396 490 GLAGVPNEGPVLLVGYHMLLGFELYSLVEEFLRE---KNIMVHGIAHPEIFLGRLENSSNEFGMTDWLKVMGAVPVAAR- 565 (756)
Q Consensus 490 g~~~lp~~gp~l~v~NH~~~~~d~~~l~~~~~~~---~~~~~r~la~~~~f~~~~~~~~p~~~~~~~~~~~g~v~v~~~- 565 (756)
..|++|+.+++|+++||++. +|.+++...+.+. ..+.+.++|...+|.. |+++.+++..|.++|.++
T Consensus 122 ~~Ekl~~g~nVIlvSNHqS~-~D~~il~~ll~~~~~~l~r~i~f~Ak~~l~~~--------Pl~~~f~~~~g~I~V~rk~ 192 (367)
T d1iuqa_ 122 IEEKLQQGHNVVLISNHQTE-ADPAIISLLLEKTNPYIAENTIFVAGDRVLAD--------PLCKPFSIGRNLICVYSKK 192 (367)
T ss_dssp HHHHHHTTCEEEEEECCCCT-THHHHHHHHHTTTCHHHHHHCEEEECTHHHHC--------TTTHHHHHTSEEEECCCGG
T ss_pred HHHHhcCCCCEEEEECCccc-ccHHHHHHHHhccccccccceEEEeehhhhcc--------HHHHHHHHhCCEEEEeccc
Confidence 35888999999999999977 5887765553211 1256888999999987 688999999999999653
Q ss_pred ---------------------hHHHHhcCC-CeEEEEeCcchhccccCCcceeEEcCCchh----HHHHHHHcCCc--ee
Q 004396 566 ---------------------NLFKLLSTK-SHVLLYPGGAREALHYKGEEYKLFWPEQQE----FVRMAARFGAT--IV 617 (756)
Q Consensus 566 ---------------------~~~~~l~~g-~~v~ifPeG~re~~~~~~~~~~l~~~~~~g----f~rlA~~~g~~--IV 617 (756)
.+.++|++| ..|+|||||||+..+...++...- +|+++ +++||.++|+| |+
T Consensus 193 ~i~~~p~l~~~~~~~~~~al~~~~~lL~~Gg~~v~IfPEGTRsr~~~~dg~l~p~-~F~~~~~~~~~~LA~~sgvP~hV~ 271 (367)
T d1iuqa_ 193 HMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPA-PFDASSVDNMRRLIQHSDVPGHLF 271 (367)
T ss_dssp GTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCC-CCCHHHHHHHHHHHHTSSSCEEEE
T ss_pred cccccccccchhhhhhhHHHHHHHHHhhcCCeEEEEeccCcccCccccccccccc-ccCccchHHHHHHHhcCCCCceEe
Confidence 245567777 567799999997544333332211 44444 47899999999 99
Q ss_pred eeeeecccchhhhhcCccccccccchHHHHHHhhcccccccccccccccccccccCccCCCCCceEEEEeCCcccCCCCC
Q 004396 618 PFGAVGEDDIADLVLDYKDLMSIPVINDCVRELARDTVNIRDDTRGEVANQALFFPGLLPKVPGRFYYLFGKPIQTKGRE 697 (756)
Q Consensus 618 Pv~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~pg~~p~~p~~~~~~~G~PI~~~~~~ 697 (756)
|+++.|.+.+.+...-.. . +...-....+++.+.||+||++..+.
T Consensus 272 Pvai~~~d~~pP~~~v~~-------------~----------------------ige~R~~~~~~V~i~~G~pId~~~~~ 316 (367)
T d1iuqa_ 272 PLALLCHDIMPPPSQVEI-------------E----------------------IGEKRVIAFNGAGLSVAPEISFEEIA 316 (367)
T ss_dssp EEEEECGGGSCCC---------------------------------------------CCCCCBCCEEEECCCCCHHHHH
T ss_pred chhhhcccccCCCccccc-------------c----------------------hhhccccCCCceeEEeCCCcchhhhh
Confidence 999998877622110000 0 00001123578999999999998764
Q ss_pred CcCCCH-HHHHHHHHHHHHHHHHHHHHHHHH
Q 004396 698 VSLKDK-ENANELYLHIKSQVERCLDYLLKK 727 (756)
Q Consensus 698 ~~~~~~-~~~~~l~~~v~~~v~~~~~~l~~~ 727 (756)
....+. +..+++.+.+.+++.+....|...
T Consensus 317 ~~~~~~~e~~ea~~k~l~d~v~eq~~~Lk~a 347 (367)
T d1iuqa_ 317 ATHKNPEEVREAYSKALFDSVAMQYNVLKTA 347 (367)
T ss_dssp HTSSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444 444455666667777776666544
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.65 E-value=2.1e-15 Score=159.97 Aligned_cols=273 Identities=11% Similarity=0.082 Sum_probs=163.8
Q ss_pred cccCCCCCc--eeeeeccCCCCC-CCCCEEEEECCCCCchh--hH-HHhH---hhh-cCCcEEEEeccCCCCCC------
Q 004396 156 IIKPDGGPP--RWFCPVDCGRPL-KGSPTLLFLPGIDGLGL--GL-ILHH---KPL-GKAFEVRCLHIPVYDRT------ 219 (756)
Q Consensus 156 ~~~~dg~~~--~~~~~~~~G~~~-~~~p~lV~lHG~~~s~~--~~-~~~~---~~L-~~gy~Vi~~Dl~G~G~S------ 219 (756)
|....|..+ .-+.|...|..+ .+.++||+.|++.++.. .| ..++ ..| .+.|.|+|+|..|.|.+
T Consensus 18 F~le~G~~l~~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s 97 (376)
T d2vata1 18 FTLESGVILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCS 97 (376)
T ss_dssp EECTTSCEEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTS
T ss_pred EEeCCCCCcCCceEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCC
Confidence 344455543 346788888753 34578999999988775 33 3333 455 46799999999988743
Q ss_pred ------------------ChhHHHHHHHHHHHHhhccCCCCCE-EEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCC
Q 004396 220 ------------------PFEGLVKFVEETVRREHASSPEKPI-YLVGDSFGGCLALAVAARNPTIDLILILSNPATSFG 280 (756)
Q Consensus 220 ------------------s~~~~a~dv~~~i~~l~~~~~~~~v-~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~ 280 (756)
++.|+++....++++++++ ++ .+||.||||+.|+++|..+|++|+++|.++......
T Consensus 98 ~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~----~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s 173 (376)
T d2vata1 98 PDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVR----QIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQS 173 (376)
T ss_dssp BCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCC----CEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCC
T ss_pred CCcccccCCcccccCCcchhHHHHHHHHHHHHHhCcc----eEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccc
Confidence 4678888888999998877 65 678999999999999999999999999998766321
Q ss_pred cCCcCCch---hHHhhchhHH------------HHhHHhHhhhh-cCChhHHHHHhhhcC--------CChHHHHHHH--
Q 004396 281 RSQLQPLF---PILKAMPDEL------------HCAVPYLLSYV-MGDPIKMAMVNIENR--------LPPRIKLEQL-- 334 (756)
Q Consensus 281 ~~~~~~~~---~~~~~~~~~~------------~~~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~-- 334 (756)
........ ..+..-+.+. .......+..+ +..+..+ ...+... ........++
T Consensus 174 ~~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~-~~rf~~~~~~~~gr~~~~~~~~~~~~~ 252 (376)
T d2vata1 174 GWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAM-DERFHMAPGVQAGRNISSQDAKKEING 252 (376)
T ss_dssp HHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHH-HHHSCCCCCCC----------------
T ss_pred hHHHHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHH-HHHHhhccccccccccccchhhhcccc
Confidence 11000000 0000000000 00000000000 0000000 0000000 0000000000
Q ss_pred ------------Hhhhhhhh-hhhhhhhccCChhhHHHHHHHHHHHH------HHHhhhccCCCCcEEEEEeCCCCCCCC
Q 004396 335 ------------SNNLPALL-PRLSVMSDIIPKDTLLWKLKLLKSAS------AYANSRLHAVKAEVLVLASGKDNMLPS 395 (756)
Q Consensus 335 ------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~PvLvI~G~~D~~vp~ 395 (756)
...+..++ .........+....+....+.+...+ ..+.+.|.+|++|+|+|.++.|.+.|+
T Consensus 253 ~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp 332 (376)
T d2vata1 253 TDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSF 332 (376)
T ss_dssp -----------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCH
T ss_pred cccccccccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCH
Confidence 00011111 11122333445555555555554321 123456899999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEEc-CCCCcccccchhhHHHHhh
Q 004396 396 EDEAKRLNNSLQNCIVRNFK-DNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 396 ~~~~~~l~~~l~~~~l~~i~-~aGH~~~~e~p~~~~~~I~ 434 (756)
+ +.+.+++.++++++++++ ..||..++.+++.+.+.|+
T Consensus 333 ~-~~~e~a~~l~~a~~~~I~S~~GHDaFL~e~~~~~~~I~ 371 (376)
T d2vata1 333 D-EHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVR 371 (376)
T ss_dssp H-HHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHH
T ss_pred H-HHHHHHHhcCCCeEEEECCCCCccccccCHHHHHHHHH
Confidence 9 499999999999999998 6799988888999999998
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.64 E-value=2e-15 Score=153.47 Aligned_cols=204 Identities=15% Similarity=0.194 Sum_probs=133.7
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECC--CCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCC-----------h
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPG--IDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-----------F 221 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG--~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-----------~ 221 (756)
+.+.||..+.-+-+.+.+. ..+.|+||++|| ++.....|......| ++||.|+++|+||++.+. .
T Consensus 17 ~~s~dG~~i~~~l~~p~~~-~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~~~~~~~ 95 (260)
T d2hu7a2 17 VESFDGSRVPTYVLESGRA-PTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPC 95 (260)
T ss_dssp EECTTSCEEEEEEEEETTS-CSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHTTTTCTT
T ss_pred EECCCCCEEEEEEEeCCCC-CCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeeccccccccccccccccc
Confidence 4567887654333444333 234689999998 344455666667777 679999999999998762 1
Q ss_pred hHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHh
Q 004396 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCA 301 (756)
Q Consensus 222 ~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (756)
....+|+.+.++.+.......++.++|+|+||..++.++..+|+.+++++..+|.... ............
T Consensus 96 ~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~--------~~~~~~~~~~~~-- 165 (260)
T d2hu7a2 96 GGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDW--------EEMYELSDAAFR-- 165 (260)
T ss_dssp THHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCH--------HHHHHTCCHHHH--
T ss_pred hhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhh--------hhhhcccccccc--
Confidence 2345677777777666555568999999999999999999999999999998875531 011111110000
Q ss_pred HHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCc
Q 004396 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAE 381 (756)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 381 (756)
..+....... .+. +.. ......+.++++|
T Consensus 166 --~~~~~~~~~~-----------------~~~------------------------------~~~--~~~~~~~~~~~~P 194 (260)
T d2hu7a2 166 --NFIEQLTGGS-----------------REI------------------------------MRS--RSPINHVDRIKEP 194 (260)
T ss_dssp --HHHHHHHCSC-----------------HHH------------------------------HHH--TCGGGCGGGCCSC
T ss_pred --cccccccccc-----------------ccc------------------------------ccc--cchhhcccccCCC
Confidence 0000000000 000 000 0011445788999
Q ss_pred EEEEEeCCCCCCCCHHHHHHHHHhC----CCeEEEEEcCCCCccc
Q 004396 382 VLVLASGKDNMLPSEDEAKRLNNSL----QNCIVRNFKDNGHTLL 422 (756)
Q Consensus 382 vLvI~G~~D~~vp~~~~~~~l~~~l----~~~~l~~i~~aGH~~~ 422 (756)
+|+++|++|.++|.+. +.++.+.+ ..+++++++|+||.+.
T Consensus 195 ~liihG~~D~~vp~~~-~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 238 (260)
T d2hu7a2 195 LALIHPQNDSRTPLKP-LLRLMGELLARGKTFEAHIIPDAGHAIN 238 (260)
T ss_dssp EEEEEETTCSSSCSHH-HHHHHHHHHHTTCCEEEEEETTCCSSCC
T ss_pred ceeeecccCceecHHH-HHHHHHHHHHCCCCeEEEEECcCCCCCC
Confidence 9999999999999995 88887655 3679999999999764
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.62 E-value=4.2e-15 Score=156.79 Aligned_cols=271 Identities=17% Similarity=0.189 Sum_probs=162.9
Q ss_pred ccccCCCCCc--eeeeeccCCCCCC-CCCEEEEECCCCCchh-------------hHHHhH---hhh-cCCcEEEEeccC
Q 004396 155 EIIKPDGGPP--RWFCPVDCGRPLK-GSPTLLFLPGIDGLGL-------------GLILHH---KPL-GKAFEVRCLHIP 214 (756)
Q Consensus 155 ~~~~~dg~~~--~~~~~~~~G~~~~-~~p~lV~lHG~~~s~~-------------~~~~~~---~~L-~~gy~Vi~~Dl~ 214 (756)
++....|..+ .-+.|...|..+. +.++||+.|++.++.. -|..++ ..| .+.|.|+++|..
T Consensus 15 ~f~le~G~~l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~l 94 (362)
T d2pl5a1 15 ELILNNGSVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVI 94 (362)
T ss_dssp CEECTTSCEESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCT
T ss_pred CeecCCCCCcCCceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccc
Confidence 3445555542 4567888786533 3478999999988742 233333 345 467999999999
Q ss_pred CCCCC----------------------ChhHHHHHHHHHHHHhhccCCCCCEE-EEEeChhhHHHHHHHHhCCCcceEEE
Q 004396 215 VYDRT----------------------PFEGLVKFVEETVRREHASSPEKPIY-LVGDSFGGCLALAVAARNPTIDLILI 271 (756)
Q Consensus 215 G~G~S----------------------s~~~~a~dv~~~i~~l~~~~~~~~v~-LvGhS~GG~vAl~~A~~~P~~v~~lV 271 (756)
|.|.| ++.|++.....++++++++ ++. ++|.||||+.|+++|..+|+.|+++|
T Consensus 95 G~~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~----~l~~viG~SmGGmqAl~wA~~yPd~v~~~v 170 (362)
T d2pl5a1 95 GGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIE----KLFCVAGGSMGGMQALEWSIAYPNSLSNCI 170 (362)
T ss_dssp TCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCS----SEEEEEEETHHHHHHHHHHHHSTTSEEEEE
T ss_pred cCcccccCccccccccccccCcCCccchhHHHHHHHHHHHHHhCcC----eeEEEeehhHHHHHHHHHHHhCchHhhhhc
Confidence 98765 3667888888888888777 665 78999999999999999999999999
Q ss_pred EeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhc--CChhH-HH---HHhhhcCCChHHHHHHHHhhh-------
Q 004396 272 LSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM--GDPIK-MA---MVNIENRLPPRIKLEQLSNNL------- 338 (756)
Q Consensus 272 Li~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~------- 338 (756)
.++.+..... +... +.......+. .-+.+-.-.+ ..|.. +. ......-.++....+.+....
T Consensus 171 ~ia~sa~~s~--~~~~--~~~~~~~aI~-~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~ 245 (362)
T d2pl5a1 171 VMASTAEHSA--MQIA--FNEVGRQAIL-SDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILS 245 (362)
T ss_dssp EESCCSBCCH--HHHH--HHHHHHHHHH-TSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTT
T ss_pred ccccccccCH--HHHH--HHHHHHHHHh-cCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccc
Confidence 9997653211 1100 0000000000 0000000000 00000 00 000000111111111111100
Q ss_pred -----hhhh-hhhhhhhccCChhhHHHHHHHHHHHH----HHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCCC
Q 004396 339 -----PALL-PRLSVMSDIIPKDTLLWKLKLLKSAS----AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN 408 (756)
Q Consensus 339 -----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~~ 408 (756)
..++ .........+....+.+..+.+...+ ....+.|.+|++|+|+|..+.|.+.|++. .+.+.+.+|+
T Consensus 246 ~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~-~~~~a~~l~~ 324 (362)
T d2pl5a1 246 TDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQ-SREIVKSLEA 324 (362)
T ss_dssp TTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHH-HHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHH-HHHHHHHHHh
Confidence 0000 01112233345555665555554321 23456789999999999999999999994 9999988874
Q ss_pred ----eEEEEEc-CCCCcccccchhhHHHHhhh
Q 004396 409 ----CIVRNFK-DNGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 409 ----~~l~~i~-~aGH~~~~e~p~~~~~~I~~ 435 (756)
+++++++ ..||..++.+.+++.+.|++
T Consensus 325 a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~~ 356 (362)
T d2pl5a1 325 ADKRVFYVELQSGEGHDSFLLKNPKQIEILKG 356 (362)
T ss_dssp TTCCEEEEEECCCBSSGGGGSCCHHHHHHHHH
T ss_pred CCCCeEEEEeCCCCCcchhccCHHHHHHHHHH
Confidence 4677775 57999999999999999983
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.62 E-value=4.7e-15 Score=147.87 Aligned_cols=174 Identities=18% Similarity=0.193 Sum_probs=113.3
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCC-----------hhHHH-------HHHHHHHHHhhccC
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-----------FEGLV-------KFVEETVRREHASS 239 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-----------~~~~a-------~dv~~~i~~l~~~~ 239 (756)
+|+||++||++++...|..+++.| +.||.|+++|+||||.|. .++.. +++..++..... .
T Consensus 24 ~~~vl~lHG~~~~~~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 102 (238)
T d1ufoa_ 24 KALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAER-R 102 (238)
T ss_dssp CEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred CeEEEEeCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhhhhhhhHHhHHHHHHHHhhhccc-c
Confidence 789999999999999999999999 679999999999999872 12221 222222222111 1
Q ss_pred CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHH
Q 004396 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (756)
Q Consensus 240 ~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (756)
...++.++|||+||.+++.+++.+|+....+.++.+............ ..+ .
T Consensus 103 ~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~--------~--------------- 154 (238)
T d1ufoa_ 103 FGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVV-----EDP--------G--------------- 154 (238)
T ss_dssp HCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTTCCC-----CCH--------H---------------
T ss_pred CCceEEEEEecccHHHHHHHHhcCcchhheeeeeeecccccccccccc-----ccc--------c---------------
Confidence 234899999999999999999999876666655544321110000000 000 0
Q ss_pred hhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHH
Q 004396 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA 399 (756)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~ 399 (756)
....... . + ........++|+|+++|++|.+++.+. +
T Consensus 155 -----------~~~~~~~-~-------------~-----------------~~~~~~~~~~P~li~~G~~D~~v~~~~-~ 191 (238)
T d1ufoa_ 155 -----------VLALYQA-P-------------P-----------------ATRGEAYGGVPLLHLHGSRDHIVPLAR-M 191 (238)
T ss_dssp -----------HHHHHHS-C-------------G-----------------GGCGGGGTTCCEEEEEETTCTTTTHHH-H
T ss_pred -----------ccchhhh-h-------------h-----------------hhhhhhhcCCCeEEEEcCCCCccCHHH-H
Confidence 0000000 0 0 001113346799999999999999995 8
Q ss_pred HHHHHhCC------CeEEEEEcCCCCccccc
Q 004396 400 KRLNNSLQ------NCIVRNFKDNGHTLLLE 424 (756)
Q Consensus 400 ~~l~~~l~------~~~l~~i~~aGH~~~~e 424 (756)
+++.+.+. ++++..++|+||.+.-+
T Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~ 222 (238)
T d1ufoa_ 192 EKTLEALRPHYPEGRLARFVEEGAGHTLTPL 222 (238)
T ss_dssp HHHHHHHGGGCTTCCEEEEEETTCCSSCCHH
T ss_pred HHHHHHHHhcCCCceEEEEEECCCCCccCHH
Confidence 88887652 56888999999987544
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.60 E-value=5.3e-15 Score=155.68 Aligned_cols=274 Identities=13% Similarity=0.092 Sum_probs=162.1
Q ss_pred ccccCCCCCc--eeeeeccCCCCCCC-CCEEEEECCCCCchhh---------HHHhH---hhh-cCCcEEEEeccCCCCC
Q 004396 155 EIIKPDGGPP--RWFCPVDCGRPLKG-SPTLLFLPGIDGLGLG---------LILHH---KPL-GKAFEVRCLHIPVYDR 218 (756)
Q Consensus 155 ~~~~~dg~~~--~~~~~~~~G~~~~~-~p~lV~lHG~~~s~~~---------~~~~~---~~L-~~gy~Vi~~Dl~G~G~ 218 (756)
.+....|..+ .-+.|...|..+.+ .++||+.|++.++... |..++ ..| .+.|.|+|+|..|.|.
T Consensus 12 ~f~l~~G~~l~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~ 91 (357)
T d2b61a1 12 PLTLMLGGKLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCK 91 (357)
T ss_dssp CEECTTSCEECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSS
T ss_pred CeecCCCCccCCceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCcc
Confidence 4444455442 45788888876444 4799999999888654 23333 355 4679999999999865
Q ss_pred C----------------------ChhHHHHHHHHHHHHhhccCCCCCE-EEEEeChhhHHHHHHHHhCCCcceEEEEeCC
Q 004396 219 T----------------------PFEGLVKFVEETVRREHASSPEKPI-YLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (756)
Q Consensus 219 S----------------------s~~~~a~dv~~~i~~l~~~~~~~~v-~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p 275 (756)
+ ++.|+++....+++++++. ++ .+||.||||+.|+++|.++|+.++++|.++.
T Consensus 92 gSs~p~s~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~----~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~ 167 (357)
T d2b61a1 92 GTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGIS----HLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCS 167 (357)
T ss_dssp SSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCC----CEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESC
T ss_pred ccCCcCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhCcc----eEEEEecccHHHHHHHHHHHhhhHHHhhhccccc
Confidence 3 4778898889999998877 66 6679999999999999999999999999987
Q ss_pred CCcCCcCCcCCch---hHHhhchhH------------HHHhHHhHhhhhc-CChhHHHHHhhhcCCChH-HHHHHHHhhh
Q 004396 276 ATSFGRSQLQPLF---PILKAMPDE------------LHCAVPYLLSYVM-GDPIKMAMVNIENRLPPR-IKLEQLSNNL 338 (756)
Q Consensus 276 ~~~~~~~~~~~~~---~~~~~~~~~------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 338 (756)
+............ ..+..-+.+ ........+..+. ..+.. ....+.+..... ......+ ..
T Consensus 168 ~a~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~-~~~~f~r~~~~~~~~~~~~~-~v 245 (357)
T d2b61a1 168 SIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQ-LAKAFGRATKSDGSFWGDYF-QV 245 (357)
T ss_dssp CSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHH-HHHHTTTCBCTTCCTTSCCB-HH
T ss_pred ccccchhHHHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHH-HHHHhccccccccccccchh-hH
Confidence 6532111100000 000000000 0000011111110 01000 000000000000 0000000 00
Q ss_pred hhhhh-hhhhhhccCChhhHHHHHHHHHHHH-----HHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC----C
Q 004396 339 PALLP-RLSVMSDIIPKDTLLWKLKLLKSAS-----AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----N 408 (756)
Q Consensus 339 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~----~ 408 (756)
..++. ....+...+....+....+.+...+ ..+.+.|.+|++|+|+|..+.|.+.|++. .+.+.+.++ +
T Consensus 246 esyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~-~~~~a~~l~~~~~~ 324 (357)
T d2b61a1 246 ESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPID-LYKSKQLLEQSGVD 324 (357)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHH-HHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHH-HHHHHHHHHhcCCC
Confidence 00000 0112233345555555555554322 12346689999999999999999999984 888877775 5
Q ss_pred eEEEEEcC-CCCcccccchhhHHHHhhh
Q 004396 409 CIVRNFKD-NGHTLLLEEGISLLTIIKG 435 (756)
Q Consensus 409 ~~l~~i~~-aGH~~~~e~p~~~~~~I~~ 435 (756)
+++++++. .||..++-+.+.+.+.|++
T Consensus 325 v~~~~I~S~~GHdafL~e~~~~~~~I~~ 352 (357)
T d2b61a1 325 LHFYEFPSDYGHDAFLVDYDQFEKRIRD 352 (357)
T ss_dssp EEEEEECCTTGGGHHHHCHHHHHHHHHH
T ss_pred eEEEEECCCCCccccCcCHHHHHHHHHH
Confidence 68888886 4999988888999888873
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.57 E-value=2e-14 Score=140.06 Aligned_cols=174 Identities=18% Similarity=0.182 Sum_probs=127.3
Q ss_pred eeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------------C---hhHHHHHHHH
Q 004396 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------------P---FEGLVKFVEE 230 (756)
Q Consensus 167 ~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------------s---~~~~a~dv~~ 230 (756)
++....|+ ++.|+||++||++++...|..+.+.|..++.|++++.+..+.. + +.+.++++..
T Consensus 7 ~~~~~~~~--~~~P~vi~lHG~G~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (203)
T d2r8ba1 7 FHKSRAGV--AGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMAD 84 (203)
T ss_dssp CEEEECCC--TTSCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHH
T ss_pred EeecCCCC--CCCCEEEEECCCCCCHHHHHHHHHHhccCCeEEEeccccccccccccccccCccccchhHHHHHHHHHHH
Confidence 45445555 3689999999999999999999999988999999976544333 2 2334555555
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhc
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (756)
+++......+.++++++|||+||.+++.+|..+|+.+.+++++++.......
T Consensus 85 ~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~---------------------------- 136 (203)
T d2r8ba1 85 FIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK---------------------------- 136 (203)
T ss_dssp HHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC----------------------------
T ss_pred HHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc----------------------------
Confidence 5555444344568999999999999999999999999999999874321000
Q ss_pred CChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCC
Q 004396 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (756)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D 390 (756)
........|++++||++|
T Consensus 137 --------------------------------------------------------------~~~~~~~~~~~i~hG~~D 154 (203)
T d2r8ba1 137 --------------------------------------------------------------ISPAKPTRRVLITAGERD 154 (203)
T ss_dssp --------------------------------------------------------------CCCCCTTCEEEEEEETTC
T ss_pred --------------------------------------------------------------cccccccchhhccccCCC
Confidence 001223569999999999
Q ss_pred CCCCCHHHHHHHHHhCC----CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 391 NMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 391 ~~vp~~~~~~~l~~~l~----~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
.++|.+. ++++.+.+. +++++++++ ||.+..+.-+++.+-+.
T Consensus 155 ~~vp~~~-~~~~~~~L~~~g~~v~~~~~~g-gH~~~~~~~~~~~~wl~ 200 (203)
T d2r8ba1 155 PICPVQL-TKALEESLKAQGGTVETVWHPG-GHEIRSGEIDAVRGFLA 200 (203)
T ss_dssp TTSCHHH-HHHHHHHHHHHSSEEEEEEESS-CSSCCHHHHHHHHHHHG
T ss_pred CcccHHH-HHHHHHHHHHCCCCEEEEEECC-CCcCCHHHHHHHHHHHH
Confidence 9999995 888887764 468889986 89976555555544444
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.56 E-value=2.8e-14 Score=144.53 Aligned_cols=97 Identities=20% Similarity=0.210 Sum_probs=82.4
Q ss_pred CCCEEEEECCC--CCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 178 GSPTLLFLPGI--DGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 178 ~~p~lV~lHG~--~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
+.|+|+|+||+ +++...|..+++.|...+.|+++|+||+|.+ +++++++++.+.|... .+.++++|+|||
T Consensus 41 ~~~~l~c~~~~~~gg~~~~y~~La~~L~~~~~V~al~~pG~~~~e~~~~s~~~~a~~~~~~i~~~---~~~~P~~L~GhS 117 (255)
T d1mo2a_ 41 GEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIRT---QGDKPFVVAGHS 117 (255)
T ss_dssp CSSEEEEECCCSSSCSGGGGHHHHHHHTTTCCEEEECCTTSSTTCCEESSHHHHHHHHHHHHHHT---TSSSCEEEEECS
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCcCCCCCCCCCHHHHHHHHHHHHHHh---CCCCCEEEEEeC
Confidence 47899999994 6778899999999988899999999999987 6889998887776553 345689999999
Q ss_pred hhhHHHHHHHHhC---CCcceEEEEeCCCC
Q 004396 251 FGGCLALAVAARN---PTIDLILILSNPAT 277 (756)
Q Consensus 251 ~GG~vAl~~A~~~---P~~v~~lVLi~p~~ 277 (756)
|||.+|+.+|.+. .+.+.+++++++..
T Consensus 118 ~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~ 147 (255)
T d1mo2a_ 118 AGALMAYALATELLDRGHPPRGVVLIDVYP 147 (255)
T ss_dssp TTHHHHHHHHHHHHHHTCCCSEEEEEECSC
T ss_pred CcHHHHHHHHHhhHhcCCCccEEEEECCCC
Confidence 9999999999765 46699999999744
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.53 E-value=9.9e-14 Score=144.76 Aligned_cols=211 Identities=15% Similarity=0.022 Sum_probs=126.5
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCCC---------------
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--------------- 220 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~Ss--------------- 220 (756)
+.+.||..+.-+.+.+.+. ....|+||++||++.+...+.......++||.|+++|+||||.|.
T Consensus 60 ~~s~dG~~l~~~l~~P~~~-~~~~P~Vv~~hG~~~~~~~~~~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~~ 138 (322)
T d1vlqa_ 60 FSGYRGQRIKGWLLVPKLE-EEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDP 138 (322)
T ss_dssp EECGGGCEEEEEEEEECCS-CSSEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCC
T ss_pred EECCCCcEEEEEEEeccCC-CCCccEEEEecCCCCCcCcHHHHHHHHhCCCEEEEeeccccCCCCCCccccccccccccc
Confidence 3456776654444444432 123689999999988776665444444889999999999999872
Q ss_pred -----------------hhHHHHHHHHHHHHhhccCC--CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCc
Q 004396 221 -----------------FEGLVKFVEETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGR 281 (756)
Q Consensus 221 -----------------~~~~a~dv~~~i~~l~~~~~--~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~ 281 (756)
......|....++.+..... ..++.++|+|+||.+++.++...| .++++|...+....
T Consensus 139 ~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~-- 215 (322)
T d1vlqa_ 139 QYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCH-- 215 (322)
T ss_dssp CCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCC--
T ss_pred cccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCcccc--
Confidence 11234555555655543322 247999999999999998888775 57778776654321
Q ss_pred CCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHH
Q 004396 282 SQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKL 361 (756)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (756)
...................... .... .....
T Consensus 216 -----~~~~~~~~~~~~~~~~~~~~~~--------------~~~~----~~~~~-------------------------- 246 (322)
T d1vlqa_ 216 -----FRRAVQLVDTHPYAEITNFLKT--------------HRDK----EEIVF-------------------------- 246 (322)
T ss_dssp -----HHHHHHHCCCTTHHHHHHHHHH--------------CTTC----HHHHH--------------------------
T ss_pred -----HHHHHhhccccchhhHHhhhhc--------------Ccch----hhhHH--------------------------
Confidence 0001110000000000000000 0000 00000
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC-CeEEEEEcCCCCccc
Q 004396 362 KLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLL 422 (756)
Q Consensus 362 ~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~-~~~l~~i~~aGH~~~ 422 (756)
...... +....+.++++|+|+++|++|.++|++. +..+.+.++ .+++++++++||...
T Consensus 247 ~~~~~~--d~~~~a~~i~~P~Lv~~G~~D~~vp~~~-~~~~~~~~~~~~~l~~~p~~~H~~~ 305 (322)
T d1vlqa_ 247 RTLSYF--DGVNFAARAKIPALFSVGLMDNICPPST-VFAAYNYYAGPKEIRIYPYNNHEGG 305 (322)
T ss_dssp HHHHTT--CHHHHHTTCCSCEEEEEETTCSSSCHHH-HHHHHHHCCSSEEEEEETTCCTTTT
T ss_pred HHhhhh--hHHHHHhcCCCCEEEEEeCCCCCcCHHH-HHHHHHHCCCCeEEEEECCCCCCCc
Confidence 000000 0113457789999999999999999995 888888876 689999999999553
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.53 E-value=4.6e-15 Score=131.21 Aligned_cols=91 Identities=19% Similarity=0.209 Sum_probs=77.3
Q ss_pred cCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-----ChhHHHHHHHHHH
Q 004396 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETV 232 (756)
Q Consensus 158 ~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-----s~~~~a~dv~~~i 232 (756)
..+|.. ++|.+.|+ +|+|||+||.. . .+.+.|+++|+|+++|+||||.| +.+++++++.+++
T Consensus 7 ~~~G~~---l~y~~~G~----G~pvlllHG~~---~---~w~~~L~~~yrvi~~DlpG~G~S~~p~~s~~~~a~~i~~ll 73 (122)
T d2dsta1 7 HLYGLN---LVFDRVGK----GPPVLLVAEEA---S---RWPEALPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFA 73 (122)
T ss_dssp EETTEE---EEEEEECC----SSEEEEESSSG---G---GCCSCCCTTSEEEEECCTTSTTCCCCCCCHHHHHHHHHHHH
T ss_pred EECCEE---EEEEEEcC----CCcEEEEeccc---c---cccccccCCeEEEEEeccccCCCCCcccccchhHHHHHHHH
Confidence 345555 68999998 89999999842 2 34567889999999999999999 5899999999999
Q ss_pred HHhhccCCCCCEEEEEeChhhHHHHHHHHhCCC
Q 004396 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPT 265 (756)
Q Consensus 233 ~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~ 265 (756)
+.++.. +++++||||||.+++++|+..+.
T Consensus 74 ~~L~i~----~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 74 VMMNLG----APWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHTTCC----SCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHhCCC----CcEEEEeCccHHHHHHHHhhccc
Confidence 998877 78999999999999999997543
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=5e-14 Score=140.19 Aligned_cols=168 Identities=17% Similarity=0.204 Sum_probs=116.0
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCC-----------------CC-----C---hhHHHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYD-----------------RT-----P---FEGLVKFVEET 231 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G-----------------~S-----s---~~~~a~dv~~~ 231 (756)
..++|||+||+|++...|..+...+ ..++.+++++-|.+. .+ + +++.++.+..+
T Consensus 20 ~~~~VI~lHG~G~~~~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~~l 99 (229)
T d1fj2a_ 20 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKAL 99 (229)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHHHHH
Confidence 3568999999999999999888887 677899888754210 00 1 34445556666
Q ss_pred HHHhhcc-CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhc
Q 004396 232 VRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (756)
Q Consensus 232 i~~l~~~-~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (756)
++..... ....+++++|+|+||.+|+.++.++|+.+.++|.+++...... ..+
T Consensus 100 i~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~-----------~~~--------------- 153 (229)
T d1fj2a_ 100 IDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA-----------SFP--------------- 153 (229)
T ss_dssp HHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG-----------GSC---------------
T ss_pred hhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccc-----------ccc---------------
Confidence 6654322 2456899999999999999999999999999999886331100 000
Q ss_pred CChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCC
Q 004396 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (756)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D 390 (756)
... ......++|++++||++|
T Consensus 154 ~~~-----------------------------------------------------------~~~~~~~~Pvli~hG~~D 174 (229)
T d1fj2a_ 154 QGP-----------------------------------------------------------IGGANRDISILQCHGDCD 174 (229)
T ss_dssp SSC-----------------------------------------------------------CCSTTTTCCEEEEEETTC
T ss_pred ccc-----------------------------------------------------------cccccccCceeEEEcCCC
Confidence 000 001223579999999999
Q ss_pred CCCCCHHHHHHHHHhC------CCeEEEEEcCCCCcccccchhhHHH
Q 004396 391 NMLPSEDEAKRLNNSL------QNCIVRNFKDNGHTLLLEEGISLLT 431 (756)
Q Consensus 391 ~~vp~~~~~~~l~~~l------~~~~l~~i~~aGH~~~~e~p~~~~~ 431 (756)
.++|.+. +++..+.+ .+++++.++++||.+..+.=+++.+
T Consensus 175 ~~vp~~~-~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~~~~~~~~~~ 220 (229)
T d1fj2a_ 175 PLVPLMF-GSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQ 220 (229)
T ss_dssp SSSCHHH-HHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHHHHHHH
T ss_pred CeeCHHH-HHHHHHHHHhcCCCCceEEEEeCCCCCccCHHHHHHHHH
Confidence 9999984 76655443 2578899999999876554333333
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.50 E-value=1.3e-13 Score=135.14 Aligned_cols=101 Identities=13% Similarity=0.077 Sum_probs=76.2
Q ss_pred CCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCC----C---------CCCChhHH---HHHHHHHHHHhhcc--
Q 004396 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPV----Y---------DRTPFEGL---VKFVEETVRREHAS-- 238 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G----~---------G~Ss~~~~---a~dv~~~i~~l~~~-- 238 (756)
++.|+||++||++++...|..+.+.|..++.+++++.+. . |..+.++. ++++.++|+.+...
T Consensus 21 ~~~p~vv~lHG~g~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 100 (209)
T d3b5ea1 21 ESRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHG 100 (209)
T ss_dssp SCCCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHhccCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999998889999986531 1 11122333 33444444443322
Q ss_pred CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 239 ~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
...++++++|||+||.+++.+|.++|+.++++|+++|..
T Consensus 101 id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~ 139 (209)
T d3b5ea1 101 LNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMP 139 (209)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCC
T ss_pred cccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcc
Confidence 234689999999999999999999999999999998743
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.48 E-value=1.7e-13 Score=139.07 Aligned_cols=166 Identities=13% Similarity=0.122 Sum_probs=121.7
Q ss_pred CCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhcc------CCCCCEEEEEeCh
Q 004396 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS------SPEKPIYLVGDSF 251 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~------~~~~~v~LvGhS~ 251 (756)
-|.||++||++++...+..+++.| +.||.|+++|++|++... .....|+.+.++.+... ....+|.++|||+
T Consensus 52 ~P~Vv~~HG~~g~~~~~~~~a~~lA~~Gy~V~~~d~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~ 130 (260)
T d1jfra_ 52 FGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQP-DSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSM 130 (260)
T ss_dssp EEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCH-HHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETH
T ss_pred ccEEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeeCCCcCCc-hhhHHHHHHHHHHHHhhhhhhccccccceEEEeccc
Confidence 479999999999999999999999 789999999999988763 23344444444443221 1135899999999
Q ss_pred hhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHH
Q 004396 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKL 331 (756)
Q Consensus 252 GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (756)
||..++.++...+ ++.++|.+++....
T Consensus 131 GG~~al~aa~~~~-~~~A~v~~~~~~~~---------------------------------------------------- 157 (260)
T d1jfra_ 131 GGGGSLEAAKSRT-SLKAAIPLTGWNTD---------------------------------------------------- 157 (260)
T ss_dssp HHHHHHHHHHHCT-TCSEEEEESCCCSC----------------------------------------------------
T ss_pred cchHHHHHHhhhc-cchhheeeeccccc----------------------------------------------------
Confidence 9999999998886 45666766653210
Q ss_pred HHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC---C
Q 004396 332 EQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ---N 408 (756)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~---~ 408 (756)
..+.++++|+|+++|++|.++|.+...+.+.+.++ .
T Consensus 158 -----------------------------------------~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~ 196 (260)
T d1jfra_ 158 -----------------------------------------KTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLD 196 (260)
T ss_dssp -----------------------------------------CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSC
T ss_pred -----------------------------------------ccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCC
Confidence 12245678999999999999998643566666664 4
Q ss_pred eEEEEEcCCCCcccccchhhHHHHhhhcccccc
Q 004396 409 CIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (756)
Q Consensus 409 ~~l~~i~~aGH~~~~e~p~~~~~~I~~~~f~rr 441 (756)
.++..++|++|.........+.+.+. .|+++
T Consensus 197 ~~~~~i~ga~H~~~~~~~~~~~~~~~--~wl~~ 227 (260)
T d1jfra_ 197 KAYLELRGASHFTPNTSDTTIAKYSI--SWLKR 227 (260)
T ss_dssp EEEEEETTCCTTGGGSCCHHHHHHHH--HHHHH
T ss_pred EEEEEECCCccCCCCCChHHHHHHHH--HHHHH
Confidence 57899999999887666666655554 45544
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.48 E-value=2.8e-13 Score=131.50 Aligned_cols=156 Identities=19% Similarity=0.192 Sum_probs=113.8
Q ss_pred CCCCEEEEECCCCCchhhHHHhHhhhcCCcEEEEeccCCCCCC-------------ChhH---HHHHHHHHHHHhhccC-
Q 004396 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------------PFEG---LVKFVEETVRREHASS- 239 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~gy~Vi~~Dl~G~G~S-------------s~~~---~a~dv~~~i~~l~~~~- 239 (756)
+++|+||++||++++...|..+.+.+.+++.|++++.+..+.. +.++ -++++..+++.+....
T Consensus 12 ~~~P~vi~lHG~g~~~~~~~~~~~~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (202)
T d2h1ia1 12 TSKPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYK 91 (202)
T ss_dssp TTSCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 4589999999999999999999999988999999875433322 2222 2333444444333222
Q ss_pred -CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHH
Q 004396 240 -PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAM 318 (756)
Q Consensus 240 -~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (756)
...++.++|+|+||.+++.+|.++|+.+.+++++++.......
T Consensus 92 ~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 135 (202)
T d2h1ia1 92 FDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGM------------------------------------ 135 (202)
T ss_dssp CCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSC------------------------------------
T ss_pred ccccceeeecccccchHHHHHHHhccccccceeeecCCCCcccc------------------------------------
Confidence 2468999999999999999999999999999998874311000
Q ss_pred HhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHH
Q 004396 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398 (756)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~ 398 (756)
........|+++++|++|.++|.+.
T Consensus 136 ------------------------------------------------------~~~~~~~~~~~i~~G~~D~~vp~~~- 160 (202)
T d2h1ia1 136 ------------------------------------------------------QLANLAGKSVFIAAGTNDPICSSAE- 160 (202)
T ss_dssp ------------------------------------------------------CCCCCTTCEEEEEEESSCSSSCHHH-
T ss_pred ------------------------------------------------------cccccccchhhcccccCCCccCHHH-
Confidence 1112345799999999999999985
Q ss_pred HHHHHHhCC----CeEEEEEcCCCCccccc
Q 004396 399 AKRLNNSLQ----NCIVRNFKDNGHTLLLE 424 (756)
Q Consensus 399 ~~~l~~~l~----~~~l~~i~~aGH~~~~e 424 (756)
++++.+.+. +.+++.+++ ||.+..+
T Consensus 161 ~~~~~~~l~~~g~~~~~~~~~g-gH~~~~~ 189 (202)
T d2h1ia1 161 SEELKVLLENANANVTMHWENR-GHQLTMG 189 (202)
T ss_dssp HHHHHHHHHTTTCEEEEEEESS-TTSCCHH
T ss_pred HHHHHHHHHHCCCCEEEEEECC-CCcCCHH
Confidence 888877664 568888985 8987543
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.48 E-value=4.5e-13 Score=135.43 Aligned_cols=89 Identities=9% Similarity=0.005 Sum_probs=68.2
Q ss_pred CCCCEEEEECCCC-----CchhhHHH----hHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEE
Q 004396 177 KGSPTLLFLPGID-----GLGLGLIL----HHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYL 246 (756)
Q Consensus 177 ~~~p~lV~lHG~~-----~s~~~~~~----~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~L 246 (756)
++.|+||++||.+ .+...|.. +...+ +.||.|+++|+|..+..++.+..+|+.+.++.+....+..+++|
T Consensus 29 ~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~~~~~~d~~~~~~~l~~~~~~~~i~l 108 (263)
T d1vkha_ 29 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNPRNLYDAVSNITRLVKEKGLTNINM 108 (263)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhhhHHHHhhhhhhhcccccccccceee
Confidence 3579999999943 22333333 33444 67899999999998888877778888777777666566679999
Q ss_pred EEeChhhHHHHHHHHhCCC
Q 004396 247 VGDSFGGCLALAVAARNPT 265 (756)
Q Consensus 247 vGhS~GG~vAl~~A~~~P~ 265 (756)
+|||+||.+|+.+|...++
T Consensus 109 ~G~S~Gg~lal~~a~~~~~ 127 (263)
T d1vkha_ 109 VGHSVGATFIWQILAALKD 127 (263)
T ss_dssp EEETHHHHHHHHHHTGGGS
T ss_pred eccCcHHHHHHHHHHhccC
Confidence 9999999999999887654
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.44 E-value=7.4e-16 Score=160.09 Aligned_cols=85 Identities=11% Similarity=-0.023 Sum_probs=59.7
Q ss_pred CCCEEEEECCCCCchhhHHHh-------Hhhh-cCCcEEEEeccCCCCCCChhHH-------HHHHHHHHHHhhccCCCC
Q 004396 178 GSPTLLFLPGIDGLGLGLILH-------HKPL-GKAFEVRCLHIPVYDRTPFEGL-------VKFVEETVRREHASSPEK 242 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~-------~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~-------a~dv~~~i~~l~~~~~~~ 242 (756)
++++|||+||++.++..|... ++.+ ++||+|+++|+||||+|+.... ++++.+.++.+.. ...
T Consensus 57 ~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~~~--~~~ 134 (318)
T d1qlwa_ 57 KRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFA--AGH 134 (318)
T ss_dssp CSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBC--CCH
T ss_pred CCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHHHHHHHHHHHHHHHhh--ccc
Confidence 356689999999999999753 4445 8999999999999999953322 2223333322221 123
Q ss_pred CEEEEEeChhhHHHHHHHHhCC
Q 004396 243 PIYLVGDSFGGCLALAVAARNP 264 (756)
Q Consensus 243 ~v~LvGhS~GG~vAl~~A~~~P 264 (756)
+..++|||+||.++..++...+
T Consensus 135 ~~~~~g~s~G~~~~~~~~~~~~ 156 (318)
T d1qlwa_ 135 EAAWAIFRFGPRYPDAFKDTQF 156 (318)
T ss_dssp HHHHHHTTSSSBTTBCCTTCCS
T ss_pred ccccccccchhHHHHHHhhhcC
Confidence 5677899999999888776654
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.43 E-value=4.2e-13 Score=138.63 Aligned_cols=101 Identities=15% Similarity=0.051 Sum_probs=86.8
Q ss_pred CCCCEEEEECCCCCchhh--HHHhHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhh
Q 004396 177 KGSPTLLFLPGIDGLGLG--LILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~--~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG 253 (756)
.+.++|||+||++++... |..+.+.| +.||+|+.+|++|+|.++.+.-++++.+.++.+....+.++|.||||||||
T Consensus 29 ~~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~~~sae~la~~i~~v~~~~g~~kV~lVGhS~GG 108 (317)
T d1tcaa_ 29 SVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGG 108 (317)
T ss_dssp SCSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHH
T ss_pred CCCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCchHhHHHHHHHHHHHHHHhccCCceEEEEeCchH
Confidence 346789999999988765 45577888 678999999999999999888888888888887766677799999999999
Q ss_pred HHHHHHHHhCC---CcceEEEEeCCCC
Q 004396 254 CLALAVAARNP---TIDLILILSNPAT 277 (756)
Q Consensus 254 ~vAl~~A~~~P---~~v~~lVLi~p~~ 277 (756)
.++..++..+| ++|..+|.+++..
T Consensus 109 ~~a~~~l~~~p~~~~~V~~~v~i~~~~ 135 (317)
T d1tcaa_ 109 LVAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp HHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHHHCCCcchheeEEEEeCCCC
Confidence 99999999988 4699999999855
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.43 E-value=7.4e-13 Score=134.16 Aligned_cols=176 Identities=14% Similarity=0.069 Sum_probs=123.6
Q ss_pred CCCEEEEECCC---CCchhhHHHhHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhh
Q 004396 178 GSPTLLFLPGI---DGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (756)
Q Consensus 178 ~~p~lV~lHG~---~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG 253 (756)
..|+|||+||. .++...|..++..| ++||.|+++|+|..+..++.+.++|+.+.++.+....+ .+|+|+|||.||
T Consensus 61 ~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~~~p~~~~d~~~a~~~~~~~~~-~rI~l~G~SaGG 139 (261)
T d2pbla1 61 PVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVTAAAKEID-GPIVLAGHSAGG 139 (261)
T ss_dssp CSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHSC-SCEEEEEETHHH
T ss_pred CCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeecccccccccccCchhHHHHHHHHHHHHhccc-CceEEEEcchHH
Confidence 47999999994 45556677777778 78999999999999999999999999999988876654 589999999999
Q ss_pred HHHHHHHHhCC------CcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCCh
Q 004396 254 CLALAVAARNP------TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (756)
Q Consensus 254 ~vAl~~A~~~P------~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (756)
.+++.++.... ..+++++++++........... .... + ...+
T Consensus 140 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~---~--------------~~~~ 187 (261)
T d2pbla1 140 HLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTS---------------MNEK---F--------------KMDA 187 (261)
T ss_dssp HHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGST---------------THHH---H--------------CCCH
T ss_pred HHHHHHhcCcccccchhhchhhhhccccccccchhhhhh---------------hccc---c--------------cCCH
Confidence 99987765432 3578888888755331100000 0000 0 0000
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhCC
Q 004396 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (756)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~ 407 (756)
+.. ...++ .....+...|+++++|++|..++.++ ++++.+.+
T Consensus 188 ----~~~----~~~SP----------------------------~~~~~~~~~P~li~~G~~D~~~~~~q-s~~~~~~l- 229 (261)
T d2pbla1 188 ----DAA----IAESP----------------------------VEMQNRYDAKVTVWVGGAERPAFLDQ-AIWLVEAW- 229 (261)
T ss_dssp ----HHH----HHTCG----------------------------GGCCCCCSCEEEEEEETTSCHHHHHH-HHHHHHHH-
T ss_pred ----HHH----HHhCc----------------------------hhhcccCCCeEEEEEecCCCchHHHH-HHHHHHHh-
Confidence 000 00000 12345677999999999998888774 88888887
Q ss_pred CeEEEEEcCCCCccccc
Q 004396 408 NCIVRNFKDNGHTLLLE 424 (756)
Q Consensus 408 ~~~l~~i~~aGH~~~~e 424 (756)
+++.+++++.+||-.++
T Consensus 230 ~~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 230 DADHVIAFEKHHFNVIE 246 (261)
T ss_dssp TCEEEEETTCCTTTTTG
T ss_pred CCCceEeCCCCchhHHH
Confidence 57888999999976553
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.37 E-value=4e-12 Score=126.49 Aligned_cols=174 Identities=18% Similarity=0.206 Sum_probs=118.7
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhhHHHhHhhh-cCCcEEEEeccCCCCCC--------------
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------------- 219 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~S-------------- 219 (756)
++...||.....+-+.+.+. ..|.||++|+..+........++.| +.||.|+++|+.|.+..
T Consensus 7 ~~~~~dg~~~~a~~~~P~~~---~~P~vl~~h~~~G~~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~ 83 (233)
T d1dina_ 7 SIQSYDGHTFGALVGSPAKA---PAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQ 83 (233)
T ss_dssp CEECTTSCEECEEEECCSSS---SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHHHHH
T ss_pred EEEcCCCCEEEEEEECCCCC---CceEEEEeCCCCCCCHHHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHHHHHH
Confidence 34456665544444444443 3799999998777666677778888 68999999998654432
Q ss_pred --------ChhHHHHHHHHHHHHhhccC-CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhH
Q 004396 220 --------PFEGLVKFVEETVRREHASS-PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPI 290 (756)
Q Consensus 220 --------s~~~~a~dv~~~i~~l~~~~-~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~ 290 (756)
+.+....|+...++.+.... ...+|.++|+|+||.+++.++.+. . +.+.+...+...
T Consensus 84 ~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~-~-~~~~~~~~~~~~------------ 149 (233)
T d1dina_ 84 AYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG-Y-VDRAVGYYGVGL------------ 149 (233)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT-C-SSEEEEESCSCG------------
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc-c-cceecccccccc------------
Confidence 24455677777777765332 235899999999999999888764 3 334443222100
Q ss_pred HhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCCChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHH
Q 004396 291 LKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY 370 (756)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (756)
. ..
T Consensus 150 ----~----------------~~--------------------------------------------------------- 152 (233)
T d1dina_ 150 ----E----------------KQ--------------------------------------------------------- 152 (233)
T ss_dssp ----G----------------GG---------------------------------------------------------
T ss_pred ----c----------------cc---------------------------------------------------------
Confidence 0 00
Q ss_pred HhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHhC---CCeEEEEEcCCCCccccc
Q 004396 371 ANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL---QNCIVRNFKDNGHTLLLE 424 (756)
Q Consensus 371 ~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~l---~~~~l~~i~~aGH~~~~e 424 (756)
.+...++++|+|+++|++|..+|.+. .+.+.+.+ +++++++++|++|....+
T Consensus 153 -~~~~~~i~~Pvl~~~G~~D~~vp~e~-~~~~~~~~~~~~~~~~~~y~ga~HgF~~~ 207 (233)
T d1dina_ 153 -LNKVPEVKHPALFHMGGQDHFVPAPS-RQLITEGFGANPLLQVHWYEEAGHSFART 207 (233)
T ss_dssp -GGGGGGCCSCEEEEEETTCTTSCHHH-HHHHHHHHTTCTTEEEEEETTCCTTTTCT
T ss_pred -hhhhhccCCcceeeecccccCCCHHH-HHHHHHHHhcCCCEEEEEECCCCcCCCCC
Confidence 02345688999999999999999884 77766544 367999999999976543
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.36 E-value=2e-12 Score=130.49 Aligned_cols=123 Identities=15% Similarity=-0.047 Sum_probs=79.8
Q ss_pred ccccCCCCCceeeeeccCCC-CCCCCCEEEEECCCCCc-----hhhHHHhHhhh-cCCcEEEEeccCCCCCCCh------
Q 004396 155 EIIKPDGGPPRWFCPVDCGR-PLKGSPTLLFLPGIDGL-----GLGLILHHKPL-GKAFEVRCLHIPVYDRTPF------ 221 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~-~~~~~p~lV~lHG~~~s-----~~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss~------ 221 (756)
.++..+|..+...-+.+.+- +.+.-|+||++||.++. ...+......+ .++|.|+.+|+||++.+..
T Consensus 7 ~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~~~~ 86 (258)
T d2bgra2 7 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAI 86 (258)
T ss_dssp EEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGG
T ss_pred EEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchHHHHhh
Confidence 34556677655555555542 22345899999994111 12222222334 6799999999999875521
Q ss_pred -----hHHHHHHHHHHHHhhccCC--CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 222 -----EGLVKFVEETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 222 -----~~~a~dv~~~i~~l~~~~~--~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
....+++.++++.+..... ..++.++|+|+||.+++.++..+|+.....+..++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~ 149 (258)
T d2bgra2 87 NRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVS 149 (258)
T ss_dssp TTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCC
T ss_pred hhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeeccc
Confidence 1124555666666554322 2469999999999999999999999888877766543
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.35 E-value=2.8e-11 Score=118.89 Aligned_cols=164 Identities=16% Similarity=0.170 Sum_probs=117.1
Q ss_pred CCCEEEEECCC---CCchh--hHHHhHhhh-cCCcEEEEeccCCCCCCC-----hhHHHHHHHHHHHHhhccCC-CCCEE
Q 004396 178 GSPTLLFLPGI---DGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHASSP-EKPIY 245 (756)
Q Consensus 178 ~~p~lV~lHG~---~~s~~--~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-----~~~~a~dv~~~i~~l~~~~~-~~~v~ 245 (756)
..+++|++||. +++.. ....++..| ..||.|+.+|+||.|.|. ...-.+|..++++.+..... ..+++
T Consensus 23 ~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~~~~e~~d~~aa~~~~~~~~~~~~~~~ 102 (218)
T d2i3da1 23 SAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGELSDAASALDWVQSLHPDSKSCW 102 (218)
T ss_dssp TCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSSHHHHHHHHHHHHHHHHHCTTCCCEE
T ss_pred CCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccccccchhHHHHHHHHHhhhhccccccccee
Confidence 36899999984 44432 345566777 789999999999999992 23334555566665544332 45899
Q ss_pred EEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcCCcCCcCCchhHHhhchhHHHHhHHhHhhhhcCChhHHHHHhhhcCC
Q 004396 246 LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRL 325 (756)
Q Consensus 246 LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (756)
++|+|+||.+++.++.+.+ .+.+++++.+......
T Consensus 103 ~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~~-------------------------------------------- 137 (218)
T d2i3da1 103 VAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTYD-------------------------------------------- 137 (218)
T ss_dssp EEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTSC--------------------------------------------
T ss_pred EEeeehHHHHHHHHHHhhc-cccceeeccccccccc--------------------------------------------
Confidence 9999999999999998874 4567777766432100
Q ss_pred ChHHHHHHHHhhhhhhhhhhhhhhccCChhhHHHHHHHHHHHHHHHhhhccCCCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q 004396 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405 (756)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLvI~G~~D~~vp~~~~~~~l~~~ 405 (756)
...+....+|+|+++|+.|.+++... ...+.+.
T Consensus 138 ----------------------------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~-~~~l~~~ 170 (218)
T d2i3da1 138 ----------------------------------------------FSFLAPCPSSGLIINGDADKVAPEKD-VNGLVEK 170 (218)
T ss_dssp ----------------------------------------------CTTCTTCCSCEEEEEETTCSSSCHHH-HHHHHHH
T ss_pred ----------------------------------------------hhhccccCCCceeeecccceecChHH-HHHHHHH
Confidence 02234457899999999999999985 7776655
Q ss_pred CC-----CeEEEEEcCCCCcccccchhhHHHHhh
Q 004396 406 LQ-----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (756)
Q Consensus 406 l~-----~~~l~~i~~aGH~~~~e~p~~~~~~I~ 434 (756)
+. +.++++++|++|+.. .+-+++.+.+.
T Consensus 171 ~~~~~~~~~~~~vi~gAdHfF~-g~~~~l~~~v~ 203 (218)
T d2i3da1 171 LKTQKGILITHRTLPGANHFFN-GKVDELMGECE 203 (218)
T ss_dssp HTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHH
T ss_pred HhhccCCCccEEEeCCCCCCCc-CCHHHHHHHHH
Confidence 42 458999999999876 55566666666
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.34 E-value=5.4e-13 Score=139.51 Aligned_cols=95 Identities=18% Similarity=0.218 Sum_probs=80.7
Q ss_pred CCEEEEECCCCCchhh------HHHhHhhh-cCCcEEEEeccCCCCCCC-----hhHHHHHHHHHHHHhhccCCCCCEEE
Q 004396 179 SPTLLFLPGIDGLGLG------LILHHKPL-GKAFEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHASSPEKPIYL 246 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~------~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-----~~~~a~dv~~~i~~l~~~~~~~~v~L 246 (756)
+.||||+||++++... |..+.+.| .+||+|+++|+||+|.|+ .+++++++.++++.++. +++++
T Consensus 8 k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~~~~~~l~~~i~~~~~~~~~----~~v~l 83 (319)
T d1cvla_ 8 RYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQVLAATGA----TKVNL 83 (319)
T ss_dssp SSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTTSHHHHHHHHHHHHHHHHCC----SCEEE
T ss_pred CCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccHHHHHHHHHHHHHHhCC----CCEEE
Confidence 5568999999887653 67788888 667999999999999883 67777788888877554 49999
Q ss_pred EEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 247 VGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 247 vGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
|||||||.++..++.++|+++.++|+++++.
T Consensus 84 vGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 84 IGHSQGGLTSRYVAAVAPQLVASVTTIGTPH 114 (319)
T ss_dssp EEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EeccccHHHHHHHHHHCccccceEEEECCCC
Confidence 9999999999999999999999999998754
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.28 E-value=2.1e-12 Score=132.35 Aligned_cols=95 Identities=21% Similarity=0.175 Sum_probs=78.3
Q ss_pred CCEEEEECCCCCchhh-----HHHhHhhh-cCCcEEEEeccCCCCCC--ChhHHHHHHHHHHHHhhccCCCCCEEEEEeC
Q 004396 179 SPTLLFLPGIDGLGLG-----LILHHKPL-GKAFEVRCLHIPVYDRT--PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (756)
Q Consensus 179 ~p~lV~lHG~~~s~~~-----~~~~~~~L-~~gy~Vi~~Dl~G~G~S--s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS 250 (756)
+.||||+||++++... |..+.+.| ..||+|+++|++|+|.+ ..++++++|.++++..+. +++++||||
T Consensus 7 ~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~~~a~~l~~~i~~~~~~~g~----~~v~ligHS 82 (285)
T d1ex9a_ 7 KYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQLLQQVEEIVALSGQ----PKVNLIGHS 82 (285)
T ss_dssp SSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHHHHHHHCC----SCEEEEEET
T ss_pred CCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcHHHHHHHHHHHHHHHHHcCC----CeEEEEEEC
Confidence 5569999999876543 67788888 67899999999999865 355666667776666544 489999999
Q ss_pred hhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 251 FGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 251 ~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
|||.++..++..+|++|+++|.++++.
T Consensus 83 ~GG~~~r~~~~~~p~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 83 HGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp THHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred ccHHHHHHHHHHCCccceeEEEECCCC
Confidence 999999999999999999999998753
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=2e-11 Score=122.96 Aligned_cols=99 Identities=15% Similarity=0.022 Sum_probs=64.8
Q ss_pred CCCEEEEECCCCCc---hhhHH--HhHhhh-cCCcEEEEeccCCCCCCC----------h-hHHHHHHHHHHHHhhccCC
Q 004396 178 GSPTLLFLPGIDGL---GLGLI--LHHKPL-GKAFEVRCLHIPVYDRTP----------F-EGLVKFVEETVRREHASSP 240 (756)
Q Consensus 178 ~~p~lV~lHG~~~s---~~~~~--~~~~~L-~~gy~Vi~~Dl~G~G~Ss----------~-~~~a~dv~~~i~~l~~~~~ 240 (756)
..|+||++||.+++ ...|. .....| ++||.|+++|+||.+.+. + ...++|+.+.++.+.....
T Consensus 30 k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~~~~g~~~~~d~~~~i~~l~~~~~ 109 (258)
T d1xfda2 30 HYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQY 109 (258)
T ss_dssp CEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSS
T ss_pred ceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhhccchhHHHHHHHHhhhhhccccc
Confidence 35899999995322 12232 123345 569999999999865431 1 1235666777777654432
Q ss_pred --CCCEEEEEeChhhHHHHHHHHhCCC----cceEEEEeCCC
Q 004396 241 --EKPIYLVGDSFGGCLALAVAARNPT----IDLILILSNPA 276 (756)
Q Consensus 241 --~~~v~LvGhS~GG~vAl~~A~~~P~----~v~~lVLi~p~ 276 (756)
..++.++|||+||.+++.++...++ .+...+.+++.
T Consensus 110 id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~ 151 (258)
T d1xfda2 110 IDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPI 151 (258)
T ss_dssp EEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCC
T ss_pred ccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccc
Confidence 3579999999999999988776554 45556666553
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.13 E-value=2.3e-10 Score=112.17 Aligned_cols=99 Identities=16% Similarity=0.189 Sum_probs=65.4
Q ss_pred CCCEEEEECCCCCchhhHHHhHhhhcC---CcEEEEeccCC--------CC---------CC-----C---hhHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHKPLGK---AFEVRCLHIPV--------YD---------RT-----P---FEGLVKFVE 229 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~---gy~Vi~~Dl~G--------~G---------~S-----s---~~~~a~dv~ 229 (756)
.+++||++||+|++...|..+.+.|.+ .+.+++++-|. .. .+ + ++...+.+.
T Consensus 13 ~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~v~ 92 (218)
T d1auoa_ 13 ADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVT 92 (218)
T ss_dssp CSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCChhhHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHHHHH
Confidence 366999999999999999888887743 35666654321 10 00 1 222233344
Q ss_pred HHHHHhhc-cCCCCCEEEEEeChhhHHHHHHHHh-CCCcceEEEEeCCC
Q 004396 230 ETVRREHA-SSPEKPIYLVGDSFGGCLALAVAAR-NPTIDLILILSNPA 276 (756)
Q Consensus 230 ~~i~~l~~-~~~~~~v~LvGhS~GG~vAl~~A~~-~P~~v~~lVLi~p~ 276 (756)
++++.... ....++++++|+|+||.+|+.++.. .+..+.++|.+++.
T Consensus 93 ~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~ 141 (218)
T d1auoa_ 93 DLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTY 141 (218)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCC
T ss_pred HHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeecccc
Confidence 44443321 1234689999999999999988765 55778899998763
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=98.91 E-value=2.7e-09 Score=112.03 Aligned_cols=122 Identities=11% Similarity=-0.048 Sum_probs=83.9
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchh-h---HHHhHhhh-cCCcEEEEeccCCCCCCC-----hhHHH
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-G---LILHHKPL-GKAFEVRCLHIPVYDRTP-----FEGLV 225 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~-~---~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-----~~~~a 225 (756)
+...||..+.---|.+.+. ..-|+||+.||++.... . +....+.| ++||.|+++|.||+|.|. .....
T Consensus 10 ipmrDGv~L~~~vy~P~~~--~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~~~~~ 87 (347)
T d1ju3a2 10 VPMRDGVRLAVDLYRPDAD--GPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVDDE 87 (347)
T ss_dssp EECTTSCEEEEEEEEECCS--SCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTTTHH
T ss_pred EECCCCCEEEEEEEEcCCC--CCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCccccccchh
Confidence 3456887755544555443 24689999999875332 2 22244556 789999999999999993 22222
Q ss_pred HHHHHHHHHhhcc-CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCcC
Q 004396 226 KFVEETVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (756)
Q Consensus 226 ~dv~~~i~~l~~~-~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~~ 279 (756)
+|..++++-+... ..+.+|.++|+|+||.+++.+|+..|..++++|...+....
T Consensus 88 ~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~ 142 (347)
T d1ju3a2 88 ADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 142 (347)
T ss_dssp HHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred hhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccchh
Confidence 3444444433322 12358999999999999999999999999999998887644
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=98.88 E-value=2.9e-09 Score=110.29 Aligned_cols=84 Identities=24% Similarity=0.241 Sum_probs=62.8
Q ss_pred CCEEEEECCCC---CchhhHHHhHhhh-c-CCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccC-----CCCCEEEEE
Q 004396 179 SPTLLFLPGID---GLGLGLILHHKPL-G-KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASS-----PEKPIYLVG 248 (756)
Q Consensus 179 ~p~lV~lHG~~---~s~~~~~~~~~~L-~-~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~-----~~~~v~LvG 248 (756)
.|+||++||.+ ++...+..+...+ . .||.|+.+|+|......+.+..+|+.+.++.+.... ..++|+++|
T Consensus 78 ~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~~~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G 157 (317)
T d1lzla_ 78 VPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGG 157 (317)
T ss_dssp EEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEE
T ss_pred CcEEEEecCcccccccccccchHHHhHHhhcCCccccccccccccccccccccccccchhHHHHHHHHhCCCHHHEEEEE
Confidence 67999999953 4555666666666 3 499999999999988877777777666665543211 124799999
Q ss_pred eChhhHHHHHHHHh
Q 004396 249 DSFGGCLALAVAAR 262 (756)
Q Consensus 249 hS~GG~vAl~~A~~ 262 (756)
+|.||.+++.++..
T Consensus 158 ~SaGg~la~~~~~~ 171 (317)
T d1lzla_ 158 QSAGGGLAAGTVLK 171 (317)
T ss_dssp ETHHHHHHHHHHHH
T ss_pred eccccHHHHHHHhh
Confidence 99999999988865
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.80 E-value=3.6e-08 Score=98.94 Aligned_cols=123 Identities=14% Similarity=0.044 Sum_probs=72.2
Q ss_pred cccCCCCCceeeeeccCC-CCCCCCCEEEEECCCCCchhh--H-HHhHhhh-cCCcEEEEeccCCCCCC-----------
Q 004396 156 IIKPDGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLGLG--L-ILHHKPL-GKAFEVRCLHIPVYDRT----------- 219 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G-~~~~~~p~lV~lHG~~~s~~~--~-~~~~~~L-~~gy~Vi~~Dl~G~G~S----------- 219 (756)
+.+.||..+...-+.+.+ ++.+..|+||++||.++.... + ......+ ..++-+...+.++....
T Consensus 12 ~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (280)
T d1qfma2 12 YPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILA 91 (280)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGG
T ss_pred EECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccccccchhhhhccccc
Confidence 346788765433344444 223457999999996443221 1 1122222 34566666766665432
Q ss_pred ChhHHHHHHHHHHHHhh--ccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 220 PFEGLVKFVEETVRREH--ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 220 s~~~~a~dv~~~i~~l~--~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
......++......... .......+.++|+|.||..+...+...++.+.+++...+...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (280)
T d1qfma2 92 NKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMD 152 (280)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCC
T ss_pred ccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccc
Confidence 12222223222222211 122345789999999999999999999999888888777553
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=98.79 E-value=3.2e-08 Score=98.68 Aligned_cols=118 Identities=14% Similarity=0.041 Sum_probs=70.6
Q ss_pred CCCCceeeeeccCC-CCCCCCCEEEEECCCCCchhhHHH-------hHhhh--c---CCcEEEEeccCCCCCC-------
Q 004396 160 DGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLGLGLIL-------HHKPL--G---KAFEVRCLHIPVYDRT------- 219 (756)
Q Consensus 160 dg~~~~~~~~~~~G-~~~~~~p~lV~lHG~~~s~~~~~~-------~~~~L--~---~gy~Vi~~Dl~G~G~S------- 219 (756)
+|....+.-|.+.+ ++.+.-|+|+++||.+++...|.. ....+ . ..+.+...+.......
T Consensus 32 ~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (255)
T d1jjfa_ 32 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYEN 111 (255)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCHHHH
T ss_pred CCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeecccccccccccccccc
Confidence 34444444455544 334457899999999887765422 11111 1 1233333322221111
Q ss_pred ChhHHHHHHHHHHHHhhcc-CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 220 PFEGLVKFVEETVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 220 s~~~~a~dv~~~i~~l~~~-~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
..+.+++++...++..... ....+++++|+|+||..++.+|.++|+++++++.+++..
T Consensus 112 ~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~ 170 (255)
T d1jjfa_ 112 FTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 170 (255)
T ss_dssp HHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred hHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCc
Confidence 1344455555555543221 223579999999999999999999999999999988754
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=98.78 E-value=1.4e-08 Score=106.97 Aligned_cols=123 Identities=20% Similarity=0.047 Sum_probs=82.2
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCC---ch--hhHHHhHhhh-cCCcEEEEeccCCC----CCCChhHH
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDG---LG--LGLILHHKPL-GKAFEVRCLHIPVY----DRTPFEGL 224 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~---s~--~~~~~~~~~L-~~gy~Vi~~Dl~G~----G~Ss~~~~ 224 (756)
.+.+.||..+....|.+.+. ....|+||++||.|. +. ..+...+..+ ..++.|+.+|+|.. ....+...
T Consensus 83 ~i~~~dg~~i~~~iy~P~~~-~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe~~~p~~ 161 (358)
T d1jkma_ 83 TILGVDGNEITLHVFRPAGV-EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSG 161 (358)
T ss_dssp EEECTTSCEEEEEEEEETTC-CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTHH
T ss_pred EEeCCCCCEEEEEEEecCCC-CCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecccccccccCCCchh
Confidence 34456776655444555443 224679999999743 22 2455566666 67899999999987 33356666
Q ss_pred HHHHHHHHHHhhc---cCCCCCEEEEEeChhhHHHHHHHHh-----CCCcceEEEEeCCCCc
Q 004396 225 VKFVEETVRREHA---SSPEKPIYLVGDSFGGCLALAVAAR-----NPTIDLILILSNPATS 278 (756)
Q Consensus 225 a~dv~~~i~~l~~---~~~~~~v~LvGhS~GG~vAl~~A~~-----~P~~v~~lVLi~p~~~ 278 (756)
.+|+.+.++.+.. ..+..+++|+|+|.||.+|+.++.. ....+.++++..|...
T Consensus 162 l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~ 223 (358)
T d1jkma_ 162 VEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYIS 223 (358)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCC
T ss_pred hHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceec
Confidence 6666666554432 1223589999999999999877643 2346788999888664
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.71 E-value=9.7e-08 Score=98.34 Aligned_cols=102 Identities=21% Similarity=0.182 Sum_probs=73.5
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhh-c-CCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccC-----CCCCEEEE
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPL-G-KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASS-----PEKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L-~-~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~-----~~~~v~Lv 247 (756)
+.|+||++||.+ ++...+..++..+ + .++.|+.+|+|......+....+|+.+.++.+.... ...++.++
T Consensus 78 ~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~ 157 (311)
T d1jjia_ 78 DSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVG 157 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEeccccccccccchhhhhhhhhhhHHHHhHHHhCcChhHEEEE
Confidence 369999999974 4555566666666 3 489999999998887777777666666665543321 12479999
Q ss_pred EeChhhHHHHHHHHh----CCCcceEEEEeCCCCcC
Q 004396 248 GDSFGGCLALAVAAR----NPTIDLILILSNPATSF 279 (756)
Q Consensus 248 GhS~GG~vAl~~A~~----~P~~v~~lVLi~p~~~~ 279 (756)
|+|.||.+++.++.. ......+.+++.|+...
T Consensus 158 G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~ 193 (311)
T d1jjia_ 158 GDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNF 193 (311)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCS
T ss_pred eeecCCcceeechhhhhhccccccceeeeecceeee
Confidence 999999988877643 23467788899887643
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=98.70 E-value=9.3e-08 Score=101.47 Aligned_cols=122 Identities=12% Similarity=0.077 Sum_probs=87.6
Q ss_pred ccccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCchhh-----------HHHhHhhh-cCCcEEEEeccCCCCCCC--
Q 004396 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLG-----------LILHHKPL-GKAFEVRCLHIPVYDRTP-- 220 (756)
Q Consensus 155 ~~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~~~-----------~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-- 220 (756)
.+...||..+...-|.+.+. ..-|+||+.|+++..... +....+.| .+||.|+++|.||+|.|.
T Consensus 28 ~i~~rDG~~L~~~v~~P~~~--~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~ 105 (381)
T d1mpxa2 28 MIPMRDGVKLHTVIVLPKGA--KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGD 105 (381)
T ss_dssp EEECTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEECCCCCEEEEEEEEeCCC--CCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCCc
Confidence 35566887765544555544 246899999987643221 12234556 789999999999999982
Q ss_pred h--------------hHHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 221 F--------------EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 221 ~--------------~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
+ .+.++|..++++.+..+. .+.+|.++|+|+||.+++.+|+..|+.++++|..++...
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 106 YVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 179 (381)
T ss_dssp CCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred eeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeeccccc
Confidence 1 234667777776654332 245899999999999999999999999999999888664
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=98.68 E-value=5.5e-08 Score=99.84 Aligned_cols=102 Identities=19% Similarity=0.134 Sum_probs=74.1
Q ss_pred CCCEEEEECCCC---CchhhHHHhHhhh-c-CCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCC-----CCCEEEE
Q 004396 178 GSPTLLFLPGID---GLGLGLILHHKPL-G-KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSP-----EKPIYLV 247 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L-~-~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~-----~~~v~Lv 247 (756)
+.|+||++||.+ ++...+..+...+ . .++.|+.+|++......+....+|+.+.++.+..... ..+++++
T Consensus 71 ~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~ 150 (308)
T d1u4na_ 71 PYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVG 150 (308)
T ss_dssp SEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEE
T ss_pred CCCEEEEEecCeeeeeccccccchhhhhhhcccccccccccccccccccccccchhhhhhhHHHHhHHhcCCCcceEEEe
Confidence 478999999964 4555666666666 3 3577889999988888877777787777776654321 2479999
Q ss_pred EeChhhHHHHHHHHhCC----CcceEEEEeCCCCcC
Q 004396 248 GDSFGGCLALAVAARNP----TIDLILILSNPATSF 279 (756)
Q Consensus 248 GhS~GG~vAl~~A~~~P----~~v~~lVLi~p~~~~ 279 (756)
|+|.||.+++.++.... ..+.+..++.+....
T Consensus 151 G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
T d1u4na_ 151 GDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 186 (308)
T ss_dssp EETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCC
T ss_pred eccccchhHHHHHHhhhhccCCCccccccccccccc
Confidence 99999999988876533 345677777776543
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.52 E-value=1.2e-07 Score=94.01 Aligned_cols=109 Identities=12% Similarity=-0.009 Sum_probs=62.0
Q ss_pred eccCCCCCCCCCEEEEECCCCCchh-hHHHhHhhh-cCC----cEEEEeccCCCCC-------C-C-hhHHHHHHHHHHH
Q 004396 169 PVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPL-GKA----FEVRCLHIPVYDR-------T-P-FEGLVKFVEETVR 233 (756)
Q Consensus 169 ~~~~G~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L-~~g----y~Vi~~Dl~G~G~-------S-s-~~~~a~dv~~~i~ 233 (756)
|.+.+.+.+..|+||++||.+.... .....++.+ .++ +-++.++....+. . . .+.+.+++..+++
T Consensus 34 ~~P~~~~~~~~Pvvv~lhG~~~~~~~~~~~~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~v~ 113 (246)
T d3c8da2 34 FTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVK 113 (246)
T ss_dssp EEC-----CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHH
T ss_pred EECCCCCCCCCCEEEEeCCcchhccCcHHHHHHHHHHhCCCCceEEeecccccccccccccCccHHHHHHHHHHhhhHHH
Confidence 3444433345799999999532211 112223344 332 2333333211110 0 1 2333455666665
Q ss_pred Hhhcc-CCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 234 REHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 234 ~l~~~-~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
..... ...+++.++|+||||..|+.++.++|+.+.+++.+++..
T Consensus 114 ~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~ 158 (246)
T d3c8da2 114 VIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 158 (246)
T ss_dssp HHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred HhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCccc
Confidence 53221 123579999999999999999999999999999999855
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.48 E-value=1.2e-07 Score=94.87 Aligned_cols=95 Identities=22% Similarity=0.179 Sum_probs=71.0
Q ss_pred EEEEECCCCCch---hhHHHhHhhhc---CCcEEEEeccCCCCCC--------ChhHHHHHHHHHHHHhhccCCCCCEEE
Q 004396 181 TLLFLPGIDGLG---LGLILHHKPLG---KAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYL 246 (756)
Q Consensus 181 ~lV~lHG~~~s~---~~~~~~~~~L~---~gy~Vi~~Dl~G~G~S--------s~~~~a~dv~~~i~~l~~~~~~~~v~L 246 (756)
|||++||++++. ..|..+.+.|. .++.|+++++.....+ .++++++.+.+.|+.... ..+++.+
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~~--~~~~v~l 84 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPK--LQQGYNA 84 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGG--GTTCEEE
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhccc--cccceeE
Confidence 799999998753 35666666663 3789999998665433 356666676666654322 2348999
Q ss_pred EEeChhhHHHHHHHHhCCC-cceEEEEeCCCC
Q 004396 247 VGDSFGGCLALAVAARNPT-IDLILILSNPAT 277 (756)
Q Consensus 247 vGhS~GG~vAl~~A~~~P~-~v~~lVLi~p~~ 277 (756)
|||||||.++-.++.+.++ .|..+|.++++.
T Consensus 85 VGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH 116 (279)
T d1ei9a_ 85 MGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp EEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred EEEccccHHHHHHHHHcCCCCcceEEEECCCC
Confidence 9999999999999999885 588999888755
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=98.45 E-value=1.3e-06 Score=93.26 Aligned_cols=79 Identities=9% Similarity=0.037 Sum_probs=63.3
Q ss_pred hhh-cCCcEEEEeccCCCCCCC-----h-hHHHHHHHHHHHHhhccC----------------CCCCEEEEEeChhhHHH
Q 004396 200 KPL-GKAFEVRCLHIPVYDRTP-----F-EGLVKFVEETVRREHASS----------------PEKPIYLVGDSFGGCLA 256 (756)
Q Consensus 200 ~~L-~~gy~Vi~~Dl~G~G~Ss-----~-~~~a~dv~~~i~~l~~~~----------------~~~~v~LvGhS~GG~vA 256 (756)
+.| .+||.|+.+|.||.|.|. + .+-++|..++|+-+.... .+.+|.++|+|+||..+
T Consensus 130 ~~~~~~GYavv~~D~RG~g~S~G~~~~~~~~e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q 209 (405)
T d1lnsa3 130 DYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMA 209 (405)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHH
T ss_pred HHHHhCCCEEEEECCCCCCCCCCccccCChhhhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHHHH
Confidence 455 789999999999999993 1 334667777887765321 13479999999999999
Q ss_pred HHHHHhCCCcceEEEEeCCCCc
Q 004396 257 LAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 257 l~~A~~~P~~v~~lVLi~p~~~ 278 (756)
+.+|+..|..++++|..++...
T Consensus 210 ~~aA~~~pp~LkAivp~~~~~d 231 (405)
T d1lnsa3 210 YGAATTGVEGLELILAEAGISS 231 (405)
T ss_dssp HHHHTTTCTTEEEEEEESCCSB
T ss_pred HHHHhcCCccceEEEecCcccc
Confidence 9999999999999999888664
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.42 E-value=2.2e-07 Score=95.12 Aligned_cols=101 Identities=15% Similarity=0.116 Sum_probs=70.5
Q ss_pred CCCCEEEEECCCCCchhh--HHHhHhhh--cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhcc--CCCCC
Q 004396 177 KGSPTLLFLPGIDGLGLG--LILHHKPL--GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHAS--SPEKP 243 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~--~~~~~~~L--~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~~--~~~~~ 243 (756)
.++|++|++||+.++... +..+..++ ...+.|+++|+...... ......+.+..+|+.+... ...++
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~ 147 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQ 147 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccccCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Confidence 358999999999776653 34455555 35599999999553322 2344455666666543322 23469
Q ss_pred EEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 244 IYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 244 v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
++|||||+||.+|-.++. +...+.+++.++|+..
T Consensus 148 vhlIGhSLGAhvAG~aG~-~~~~l~rItgLDPA~P 181 (337)
T d1rp1a2 148 VQLIGHSLGAHVAGEAGS-RTPGLGRITGLDPVEA 181 (337)
T ss_dssp EEEEEETHHHHHHHHHHH-TSTTCCEEEEESCCCT
T ss_pred eEEEeecHHHhhhHHHHH-hhccccceeccCCCcc
Confidence 999999999999985555 4467999999999773
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.38 E-value=2.9e-07 Score=93.99 Aligned_cols=101 Identities=16% Similarity=0.085 Sum_probs=74.9
Q ss_pred CCCCEEEEECCCCCchhh--HHHhHhhh--cCCcEEEEeccCCCCCC-------ChhHHHHHHHHHHHHhhc--cCCCCC
Q 004396 177 KGSPTLLFLPGIDGLGLG--LILHHKPL--GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHA--SSPEKP 243 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~--~~~~~~~L--~~gy~Vi~~Dl~G~G~S-------s~~~~a~dv~~~i~~l~~--~~~~~~ 243 (756)
.+.|+++++||+.++... +..+.+++ ...+.|+++|+...... ......+.+..+|+.+.. ....++
T Consensus 68 ~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~ 147 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPEN 147 (338)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccchHHHHHhHHHHHHHHHHHHHHHHHhcCCCcce
Confidence 358999999999776653 34455554 35699999999654332 245555666666665432 233469
Q ss_pred EEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 244 IYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 244 v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
++|||||+||.+|-.++.+.+.++.+++.++|+.
T Consensus 148 vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~ 181 (338)
T d1bu8a2 148 VHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (338)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred eEEEeccHHHHHHHHHHHhhccccccccccccCc
Confidence 9999999999999999998888999999999976
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.23 E-value=8.5e-06 Score=81.05 Aligned_cols=101 Identities=10% Similarity=-0.051 Sum_probs=65.4
Q ss_pred CCCCEEEEECCCCCchhhHH-------HhHhhh-----cCCcEEEEeccCCCCCCC---hhHHHHHHHHHHHHhh-----
Q 004396 177 KGSPTLLFLPGIDGLGLGLI-------LHHKPL-----GKAFEVRCLHIPVYDRTP---FEGLVKFVEETVRREH----- 236 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~-------~~~~~L-----~~gy~Vi~~Dl~G~G~Ss---~~~~a~dv~~~i~~l~----- 236 (756)
+.-|+|+++||.+++...|. .....+ ...+.|+.++..+.+..+ ..+..+++...++...
T Consensus 53 k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (273)
T d1wb4a1 53 KKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAE 132 (273)
T ss_dssp SCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTTCCTTTHHHHHHHTHHHHHHHHSCCSCS
T ss_pred CCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCCCccccchhcccccccchhhhhhhhhhh
Confidence 44799999999887654321 112222 346788888876544332 2223333333322211
Q ss_pred ------ccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCC
Q 004396 237 ------ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (756)
Q Consensus 237 ------~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~ 277 (756)
......++.+.|+||||..++.+|.++|+++.+++.+++..
T Consensus 133 ~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~ 179 (273)
T d1wb4a1 133 STTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 179 (273)
T ss_dssp SCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred hhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccc
Confidence 01123479999999999999999999999999999998854
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=98.19 E-value=1.4e-05 Score=84.22 Aligned_cols=121 Identities=12% Similarity=0.028 Sum_probs=85.6
Q ss_pred cccCCCCCceeeeeccCCCCCCCCCEEEEECCCCCch------------hhHHHhHhhh-cCCcEEEEeccCCCCCCC--
Q 004396 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLG------------LGLILHHKPL-GKAFEVRCLHIPVYDRTP-- 220 (756)
Q Consensus 156 ~~~~dg~~~~~~~~~~~G~~~~~~p~lV~lHG~~~s~------------~~~~~~~~~L-~~gy~Vi~~Dl~G~G~Ss-- 220 (756)
+...||..+..--|.+.+. ..-|+||+.|+++..+ .......+.| ++||.|+.+|.||+|.|.
T Consensus 33 ipmrDG~~L~~~v~~P~~~--~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~ 110 (385)
T d2b9va2 33 VPMRDGVKLYTVIVIPKNA--RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGD 110 (385)
T ss_dssp EECTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EECCCCCEEEEEEEEcCCC--CceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCCCc
Confidence 4566887765544555443 2467888888764321 1122234556 789999999999999983
Q ss_pred h--------------hHHHHHHHHHHHHhhccC--CCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 221 F--------------EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 221 ~--------------~~~a~dv~~~i~~l~~~~--~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
+ .+-++|..++++.+..+. .+.+|.++|+|+||..++.+|...|+.+++++..++...
T Consensus 111 ~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 111 YVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 184 (385)
T ss_dssp CCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred eeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEeccccc
Confidence 1 124677777777765442 245899999999999999999999999999998777654
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.16 E-value=8.1e-06 Score=82.26 Aligned_cols=100 Identities=16% Similarity=0.059 Sum_probs=71.0
Q ss_pred CCCEEEEECCCCCch--hhHHH---hHhhh-cCCcEEEEeccCCCCCC----------------Chh-HHHHHHHHHHHH
Q 004396 178 GSPTLLFLPGIDGLG--LGLIL---HHKPL-GKAFEVRCLHIPVYDRT----------------PFE-GLVKFVEETVRR 234 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~--~~~~~---~~~~L-~~gy~Vi~~Dl~G~G~S----------------s~~-~~a~dv~~~i~~ 234 (756)
..|+|+++||.+++. ..|.. +.+.+ ..++.+++++..+.+.. .++ .+++++...|+.
T Consensus 33 ~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~ 112 (288)
T d1sfra_ 33 NSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQA 112 (288)
T ss_dssp TBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHH
T ss_pred CceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCccccCcccccccccchhHHHHHHHHhHHHHHH
Confidence 489999999987653 34433 23344 45788999987665432 122 245666666655
Q ss_pred hhccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 235 l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
..... ..++.+.|+||||..|+.+|.++|+++.+++.+++...
T Consensus 113 ~~~~d-~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~ 155 (288)
T d1sfra_ 113 NRHVK-PTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLD 155 (288)
T ss_dssp HHCBC-SSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSC
T ss_pred hcCCC-CCceEEEEEccHHHHHHHHHHhccccccEEEEecCccc
Confidence 33222 34799999999999999999999999999999998653
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.11 E-value=7.3e-06 Score=82.41 Aligned_cols=99 Identities=16% Similarity=0.036 Sum_probs=71.1
Q ss_pred CCEEEEECCCCCc--hhhHHH---hHhhh-cCCcEEEEeccCCCCC----------------CChhH-HHHHHHHHHHHh
Q 004396 179 SPTLLFLPGIDGL--GLGLIL---HHKPL-GKAFEVRCLHIPVYDR----------------TPFEG-LVKFVEETVRRE 235 (756)
Q Consensus 179 ~p~lV~lHG~~~s--~~~~~~---~~~~L-~~gy~Vi~~Dl~G~G~----------------Ss~~~-~a~dv~~~i~~l 235 (756)
.|+|+|+||.++. ...|.. +.+.+ ..++-|+.+|-...+. -.+++ +++++...|+..
T Consensus 29 ~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~ 108 (280)
T d1dqza_ 29 PHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQAN 108 (280)
T ss_dssp SSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHH
T ss_pred CCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCCcchhHHHHHHHHHHHHHHHh
Confidence 6899999998653 446654 22334 5679999998422111 02333 467777777764
Q ss_pred hccCCCCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 236 HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 236 ~~~~~~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
.... .+++++.|+||||..|+.+|.++|+++++++.+++...
T Consensus 109 ~~~d-~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~ 150 (280)
T d1dqza_ 109 KGVS-PTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLN 150 (280)
T ss_dssp HCCC-SSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred cCCC-CCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccC
Confidence 4332 34689999999999999999999999999999998663
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.05 E-value=9.5e-05 Score=79.39 Aligned_cols=111 Identities=18% Similarity=0.106 Sum_probs=77.8
Q ss_pred eeccCCCCCCCCCEEEEECCCCCchhhHHHhHhh------------------hcCCcEEEEeccC-CCCCC---------
Q 004396 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKP------------------LGKAFEVRCLHIP-VYDRT--------- 219 (756)
Q Consensus 168 ~~~~~G~~~~~~p~lV~lHG~~~s~~~~~~~~~~------------------L~~gy~Vi~~Dl~-G~G~S--------- 219 (756)
.+.++....++.|+++++.|.+|++..|..+.+. +.+..+++-+|.| |.|.|
T Consensus 37 w~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDqPvGtGfS~~~~~~~~~ 116 (452)
T d1ivya_ 37 WFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYAT 116 (452)
T ss_dssp EEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEESSCCCCC
T ss_pred EEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEecCCCcccccCCCCCCCC
Confidence 3334433235689999999999998887654321 1245789999986 99988
Q ss_pred ChhHHHHHHHHHHHHhhccC---CCCCEEEEEeChhhHHHHHHHHh----CCCcceEEEEeCCCCc
Q 004396 220 PFEGLVKFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAAR----NPTIDLILILSNPATS 278 (756)
Q Consensus 220 s~~~~a~dv~~~i~~l~~~~---~~~~v~LvGhS~GG~vAl~~A~~----~P~~v~~lVLi~p~~~ 278 (756)
+..+.+.|+.+++...-... ..++++|.|.|+||..+-.+|.. .+-.++|+++.++...
T Consensus 117 ~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~~d 182 (452)
T d1ivya_ 117 NDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 182 (452)
T ss_dssp BHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred CcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCccC
Confidence 24556666655555443333 35699999999999988888854 2235899999999774
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.04 E-value=1.6e-05 Score=79.16 Aligned_cols=99 Identities=16% Similarity=0.085 Sum_probs=69.8
Q ss_pred CCEEEEECCCCCc--hhhHHHhH---hhh-cCCcEEEEeccCCC---------CCCChhH-HHHHHHHHHHHhhccCCCC
Q 004396 179 SPTLLFLPGIDGL--GLGLILHH---KPL-GKAFEVRCLHIPVY---------DRTPFEG-LVKFVEETVRREHASSPEK 242 (756)
Q Consensus 179 ~p~lV~lHG~~~s--~~~~~~~~---~~L-~~gy~Vi~~Dl~G~---------G~Ss~~~-~a~dv~~~i~~l~~~~~~~ 242 (756)
.|+|+++||.++. ...|.... +.. ..++-|+.+|--.. |...+++ +++++...|+..... ..+
T Consensus 27 ~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~~~~~~~tfl~~eL~~~i~~~~~~-d~~ 105 (267)
T d1r88a_ 27 PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRGL-APG 105 (267)
T ss_dssp SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHHHHHSCC-CSS
T ss_pred CCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCccccccccccHHHHHHHHHHHHHHHhcCC-CCC
Confidence 6899999998654 34676532 333 45788888874211 1112544 455677777654322 235
Q ss_pred CEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCCCc
Q 004396 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (756)
Q Consensus 243 ~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~~~ 278 (756)
++.+.|+||||..|+.+|.++|+++++++.+++...
T Consensus 106 r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~ 141 (267)
T d1r88a_ 106 GHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY 141 (267)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCC
T ss_pred ceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccC
Confidence 789999999999999999999999999999998653
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.00 E-value=2.7e-06 Score=88.84 Aligned_cols=98 Identities=11% Similarity=0.027 Sum_probs=72.9
Q ss_pred CCCEEEEECCCCCch-------hhHHH----hHhhh-cCCcEEEEeccCCCCCCChhHHHHHHHHHHHHhhccCC-----
Q 004396 178 GSPTLLFLPGIDGLG-------LGLIL----HHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSP----- 240 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~-------~~~~~----~~~~L-~~gy~Vi~~Dl~G~G~Ss~~~~a~dv~~~i~~l~~~~~----- 240 (756)
++-||||+||+.+-. ..|.. +.+.| .+|++|++......+ +.++-++++...|+.....++
T Consensus 6 ~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~--S~~~RA~eL~~~I~~~~~d~G~~hs~ 83 (388)
T d1ku0a_ 6 NDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS--SNWDRACEAYAQLVGGTVDYGAAHAA 83 (388)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSB--CHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCcc--CHHHHHHHHHHHHhhhhhhhhHhHHh
Confidence 456899999986542 23543 55667 789999999986655 778888888888876543332
Q ss_pred --------------------CCCEEEEEeChhhHHHHHHHHhCC-------------------------CcceEEEEeCC
Q 004396 241 --------------------EKPIYLVGDSFGGCLALAVAARNP-------------------------TIDLILILSNP 275 (756)
Q Consensus 241 --------------------~~~v~LvGhS~GG~vAl~~A~~~P-------------------------~~v~~lVLi~p 275 (756)
..||+||||||||..+-.++...| +.|+.|+-+++
T Consensus 84 ~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~SvTTIsT 163 (388)
T d1ku0a_ 84 KHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLSVTTIAT 163 (388)
T ss_dssp HHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESC
T ss_pred hhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcceEEEEeccC
Confidence 248999999999999988886543 36999999887
Q ss_pred CC
Q 004396 276 AT 277 (756)
Q Consensus 276 ~~ 277 (756)
+-
T Consensus 164 PH 165 (388)
T d1ku0a_ 164 PH 165 (388)
T ss_dssp CT
T ss_pred CC
Confidence 55
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.96 E-value=2.4e-05 Score=79.19 Aligned_cols=101 Identities=14% Similarity=0.108 Sum_probs=68.0
Q ss_pred CCCCEEEEECCCCCchhhHHHhH--hhh--cCCcEEEEeccC----------------CCCCC--------------Chh
Q 004396 177 KGSPTLLFLPGIDGLGLGLILHH--KPL--GKAFEVRCLHIP----------------VYDRT--------------PFE 222 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~--~~L--~~gy~Vi~~Dl~----------------G~G~S--------------s~~ 222 (756)
+.-|+|.++||.+++...|.... ..+ ..+..|+..+.. |.+.+ .++
T Consensus 47 ~~yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~ 126 (299)
T d1pv1a_ 47 KRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMY 126 (299)
T ss_dssp TTBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHH
T ss_pred CCCCEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccchH
Confidence 34689999999999998886532 222 345677777632 22222 123
Q ss_pred H-HHHHHHHHHHHhhccCCC------CCEEEEEeChhhHHHHHHHHh--CCCcceEEEEeCCCC
Q 004396 223 G-LVKFVEETVRREHASSPE------KPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (756)
Q Consensus 223 ~-~a~dv~~~i~~l~~~~~~------~~v~LvGhS~GG~vAl~~A~~--~P~~v~~lVLi~p~~ 277 (756)
+ +++++...|+..-..... .+..|.||||||.-|+.+|.+ +|+...++...++..
T Consensus 127 ~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~ 190 (299)
T d1pv1a_ 127 DYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIV 190 (299)
T ss_dssp HHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcC
Confidence 3 456777777764322221 368999999999999999976 488999998888755
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.85 E-value=0.0016 Score=68.76 Aligned_cols=103 Identities=17% Similarity=0.104 Sum_probs=74.4
Q ss_pred CCCCCEEEEECCCCCchhhHHHhHh-----------------hhcCCcEEEEeccC-CCCCC--------ChhHHHHHHH
Q 004396 176 LKGSPTLLFLPGIDGLGLGLILHHK-----------------PLGKAFEVRCLHIP-VYDRT--------PFEGLVKFVE 229 (756)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~~~~~~-----------------~L~~gy~Vi~~Dl~-G~G~S--------s~~~~a~dv~ 229 (756)
.++.|++|.+.|.+|++..+..+.+ .+.+..+++-+|.| |.|.| +-.+.++|+.
T Consensus 41 ~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~PvGtGfSy~~~~~~~~~~~~a~d~~ 120 (421)
T d1wpxa1 41 PAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVY 120 (421)
T ss_dssp TTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCSTTSTTCBCSSCCCCSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecCCCCCceecCCccccchHHHHHHHH
Confidence 3568999999999998888765442 11245789999954 88887 3455666666
Q ss_pred HHHHHhhccCC-----CCCEEEEEeChhhHHHHHHHHhC---C---CcceEEEEeCCCCc
Q 004396 230 ETVRREHASSP-----EKPIYLVGDSFGGCLALAVAARN---P---TIDLILILSNPATS 278 (756)
Q Consensus 230 ~~i~~l~~~~~-----~~~v~LvGhS~GG~vAl~~A~~~---P---~~v~~lVLi~p~~~ 278 (756)
++++......+ ..+++|.|.|+||..+-.+|.+. . -.++|+++.++...
T Consensus 121 ~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~~d 180 (421)
T d1wpxa1 121 NFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp HHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCCCC
T ss_pred HHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCccc
Confidence 66665544433 34899999999999888888442 2 34779999998764
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=97.85 E-value=2.7e-05 Score=79.21 Aligned_cols=47 Identities=13% Similarity=0.118 Sum_probs=38.9
Q ss_pred CCCcEEEEEeCCCCCCCCHHHHHHHHHhCC------CeEEEEEcCCCCcccccc
Q 004396 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQ------NCIVRNFKDNGHTLLLEE 425 (756)
Q Consensus 378 i~~PvLvI~G~~D~~vp~~~~~~~l~~~l~------~~~l~~i~~aGH~~~~e~ 425 (756)
.+.|+++++|++|..|++.. ++++.+.+. +.+++..+++||....+.
T Consensus 89 ~~~pvll~hG~~D~~Vpp~~-s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~~ 141 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPNV-MNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDF 141 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHH-HHHHHHHHTTTSCGGGEEEEEETTCCSSEEESS
T ss_pred CCCCEEEEecCCCCCcCHHH-HHHHHHHHHcCcCCCceEEEEeCCCCCCCCCCC
Confidence 35799999999999999995 888887764 457788899999987654
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=97.84 E-value=2.4e-05 Score=77.49 Aligned_cols=121 Identities=16% Similarity=0.087 Sum_probs=64.0
Q ss_pred ccccCCCCC-ceeeeeccCC-CCCCCCCEEEEECCCCCchhhHHHhHhhh--cCCcEEEEeccCCCCCC-----------
Q 004396 155 EIIKPDGGP-PRWFCPVDCG-RPLKGSPTLLFLPGIDGLGLGLILHHKPL--GKAFEVRCLHIPVYDRT----------- 219 (756)
Q Consensus 155 ~~~~~dg~~-~~~~~~~~~G-~~~~~~p~lV~lHG~~~s~~~~~~~~~~L--~~gy~Vi~~Dl~G~G~S----------- 219 (756)
++...||.. .+.+-+.+.+ ++.+.-|+|+++||..............+ ..++.|+++++++...-
T Consensus 17 ~~~s~dg~~~~~~~v~~P~~~~~~~~yPvi~~lhG~~~~~~~~~~~~~~~~~~~~~~vV~v~~~~~~~~~~~~r~~d~~~ 96 (265)
T d2gzsa1 17 SFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTP 96 (265)
T ss_dssp EEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHHCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHHHTCC
T ss_pred EEEcCCCCEEEEEEEEcCCCCCCCCCceEEEEecCcchhhhHHHHHHHHHHhcCCCeEEEecCCCCCcCccccccccccc
Confidence 455666654 3233333333 22344689999999422111111112222 45688888887765321
Q ss_pred -------------------ChhHHHHHH-HHHHHHhhccCC--CCCEEEEEeChhhHHHHHHHHhCCCcceEEEEeCCC
Q 004396 220 -------------------PFEGLVKFV-EETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPA 276 (756)
Q Consensus 220 -------------------s~~~~a~dv-~~~i~~l~~~~~--~~~v~LvGhS~GG~vAl~~A~~~P~~v~~lVLi~p~ 276 (756)
..+.+.+.+ .+++..+...+. ..++.+.||||||..++.++.+ ++.+.+++..+|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a~s~~ 174 (265)
T d2gzsa1 97 AAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (265)
T ss_dssp GGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred ccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHc-CcccCEEEEECCc
Confidence 011122211 122222222221 2468999999999999987665 5667777777663
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=97.67 E-value=0.00038 Score=75.22 Aligned_cols=101 Identities=16% Similarity=0.103 Sum_probs=72.4
Q ss_pred CCCEEEEECCCCCchhhHHHhHh-----------------hhcCCcEEEEeccC-CCCCC-----------------Chh
Q 004396 178 GSPTLLFLPGIDGLGLGLILHHK-----------------PLGKAFEVRCLHIP-VYDRT-----------------PFE 222 (756)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~-----------------~L~~gy~Vi~~Dl~-G~G~S-----------------s~~ 222 (756)
+.|++|.+.|.+|++..+..+.+ .+.+..+++-+|.| |.|.| +.+
T Consensus 66 ~~Pl~lWlnGGPGcSS~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~ 145 (483)
T d1ac5a_ 66 DRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLE 145 (483)
T ss_dssp SCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeecCCCCccccccccccCCHH
Confidence 46999999999998887755331 11245789999975 88877 135
Q ss_pred HHHHHHHHHHHHhhccCC---CCCEEEEEeChhhHHHHHHHHhC------------CCcceEEEEeCCCCc
Q 004396 223 GLVKFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAARN------------PTIDLILILSNPATS 278 (756)
Q Consensus 223 ~~a~dv~~~i~~l~~~~~---~~~v~LvGhS~GG~vAl~~A~~~------------P~~v~~lVLi~p~~~ 278 (756)
+.++++..++.......| .++++|.|.|+||..+-.+|... +=.++++.+.++...
T Consensus 146 ~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T d1ac5a_ 146 DVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp HHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCccC
Confidence 567777777765433333 46899999999999888888542 125889999888763
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=94.39 E-value=0.019 Score=55.94 Aligned_cols=42 Identities=24% Similarity=0.377 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 221 ~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
+..+.+++...++.+...++..++++.|||+||++|..+|..
T Consensus 112 ~~~~~~~i~~~v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 112 YEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 555666666667666666777899999999999999988854
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=94.31 E-value=0.02 Score=55.64 Aligned_cols=42 Identities=24% Similarity=0.414 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 221 ~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
+..+.+++...++.+..+++..++++.|||+||++|..+|..
T Consensus 104 ~~~i~~~i~~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 104 WISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 455566677777777666788899999999999999988754
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=94.22 E-value=0.022 Score=55.67 Aligned_cols=43 Identities=21% Similarity=0.393 Sum_probs=34.0
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC
Q 004396 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN 263 (756)
Q Consensus 221 ~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~ 263 (756)
+..+.+++...++.+..+.+..++++.|||+||++|..+|...
T Consensus 117 ~~~~~~~v~~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 117 WRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceeeeccchHHHHHHHHHHHH
Confidence 5556666777777666667788999999999999999888653
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=94.22 E-value=0.019 Score=56.18 Aligned_cols=42 Identities=19% Similarity=0.305 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 221 ~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
+..+.+++...++.+..+++..++++.|||+||++|..+|..
T Consensus 116 ~~~~~~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 116 WKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 555666677777776666777899999999999999988865
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.16 E-value=0.018 Score=62.36 Aligned_cols=99 Identities=13% Similarity=0.131 Sum_probs=61.1
Q ss_pred CCCCEEEEECCCCC---chhhHHHhHhhh--cCCcEEEEeccC----CCCC---C---C----hhHH---HHHHHHHHHH
Q 004396 177 KGSPTLLFLPGIDG---LGLGLILHHKPL--GKAFEVRCLHIP----VYDR---T---P----FEGL---VKFVEETVRR 234 (756)
Q Consensus 177 ~~~p~lV~lHG~~~---s~~~~~~~~~~L--~~gy~Vi~~Dl~----G~G~---S---s----~~~~---a~dv~~~i~~ 234 (756)
++-|++|++||.+. ++.........+ .++.-|+.+.+| |+-. . + +.|+ .+.|.+-|..
T Consensus 110 ~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 189 (542)
T d2ha2a1 110 SPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 189 (542)
T ss_dssp SCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCcEEEEEEECccccccCcccccCchhhhhhccceeEeeeeeccceeeecccccccCCCcCCcccHHHHHHHHHHHHHH
Confidence 45699999999642 222221111223 356888888887 3311 1 1 3333 2445555555
Q ss_pred hhccCCCCCEEEEEeChhhHHHHHHHHhCC--CcceEEEEeCCCC
Q 004396 235 EHASSPEKPIYLVGDSFGGCLALAVAARNP--TIDLILILSNPAT 277 (756)
Q Consensus 235 l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P--~~v~~lVLi~p~~ 277 (756)
.+-+ ..+|+|+|||.||..+..++.... ..+.++|+.+...
T Consensus 190 FGGD--P~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 190 FGGD--PMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp GTEE--EEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred hhcC--ccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 4443 348999999999988887665432 5899999988754
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=94.01 E-value=0.024 Score=60.35 Aligned_cols=99 Identities=17% Similarity=0.176 Sum_probs=60.8
Q ss_pred CCCCEEEEECCCCC---chhhHHHhHhhh--cCCcEEEEeccC----CCC---C--C------ChhHH---HHHHHHHHH
Q 004396 177 KGSPTLLFLPGIDG---LGLGLILHHKPL--GKAFEVRCLHIP----VYD---R--T------PFEGL---VKFVEETVR 233 (756)
Q Consensus 177 ~~~p~lV~lHG~~~---s~~~~~~~~~~L--~~gy~Vi~~Dl~----G~G---~--S------s~~~~---a~dv~~~i~ 233 (756)
++-|++|++||.+. +...+......+ .++.-|+.+.+| |+= . . .+.|+ .+.|.+-|.
T Consensus 94 ~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~ 173 (483)
T d1qe3a_ 94 QNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENIS 173 (483)
T ss_dssp CSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGG
T ss_pred CCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhccccccccccccccccHHHHHHHHHHHHHHH
Confidence 35799999999743 222222222233 346888888876 331 1 1 13333 234444455
Q ss_pred HhhccCCCCCEEEEEeChhhHHHHHHHHhC--CCcceEEEEeCCCC
Q 004396 234 REHASSPEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (756)
Q Consensus 234 ~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~--P~~v~~lVLi~p~~ 277 (756)
..+.+ ..+|+|+|||.||..+..++... ...+.++|+.++..
T Consensus 174 ~FGGD--p~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 217 (483)
T d1qe3a_ 174 AFGGD--PDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 217 (483)
T ss_dssp GGTEE--EEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HcCCC--cccceeeccccccchhhhhhcccccCCcceeeccccCCc
Confidence 44433 35899999999998887666532 25899999998754
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=94.00 E-value=0.026 Score=61.19 Aligned_cols=99 Identities=9% Similarity=0.102 Sum_probs=59.8
Q ss_pred CCCCEEEEECCCCCch---hhH--HHh-Hhhh--cCCcEEEEeccC----CCCCC-----------ChhHH---HHHHHH
Q 004396 177 KGSPTLLFLPGIDGLG---LGL--ILH-HKPL--GKAFEVRCLHIP----VYDRT-----------PFEGL---VKFVEE 230 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s~---~~~--~~~-~~~L--~~gy~Vi~~Dl~----G~G~S-----------s~~~~---a~dv~~ 230 (756)
++.|++|++||.+... ..+ ..+ ...+ .++.-|+.+.+| |+-.+ .+.|+ .+.|.+
T Consensus 120 ~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~ 199 (544)
T d1thga_ 120 AKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSD 199 (544)
T ss_dssp CCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhccccccHHHHHhhhhhhhhhh
Confidence 4579999999975332 211 111 2223 466888899987 33221 12222 344455
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC--------CCcceEEEEeCCCC
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARN--------PTIDLILILSNPAT 277 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~--------P~~v~~lVLi~p~~ 277 (756)
-|...+-+ ..+|+|+|||.||..+..++... ...+.++|+.++..
T Consensus 200 nI~~FGGD--p~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 200 NIANFGGD--PDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HGGGGTEE--EEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred hhcccccC--CCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 55554443 35899999999987665554321 24789999988754
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=93.99 E-value=0.026 Score=54.99 Aligned_cols=42 Identities=21% Similarity=0.309 Sum_probs=32.1
Q ss_pred hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHh
Q 004396 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (756)
Q Consensus 221 ~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~ 262 (756)
+..+.+++...+..+..+++..++++.|||+||++|..+|..
T Consensus 111 ~~~v~~~i~~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 111 YGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 455556666666665566777899999999999999988754
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=93.36 E-value=0.063 Score=57.77 Aligned_cols=99 Identities=13% Similarity=0.100 Sum_probs=58.3
Q ss_pred CCCCEEEEECCCCC---chhhH--HHhH-hhh--cCCcEEEEeccC----CCCCC-----------ChhHHH---HHHHH
Q 004396 177 KGSPTLLFLPGIDG---LGLGL--ILHH-KPL--GKAFEVRCLHIP----VYDRT-----------PFEGLV---KFVEE 230 (756)
Q Consensus 177 ~~~p~lV~lHG~~~---s~~~~--~~~~-~~L--~~gy~Vi~~Dl~----G~G~S-----------s~~~~a---~dv~~ 230 (756)
++.|+||++||.+. ++..| ..+. ..+ .++.-|+.+.+| |+-.+ .+.|+. +.|.+
T Consensus 112 ~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~ 191 (534)
T d1llfa_ 112 ANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVAD 191 (534)
T ss_dssp CCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccccccccccchhHHHHHHHHHHh
Confidence 46899999999753 23222 1222 222 567889999987 22221 122222 34444
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHH-HHHHhC----C---CcceEEEEeCCCC
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLAL-AVAARN----P---TIDLILILSNPAT 277 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl-~~A~~~----P---~~v~~lVLi~p~~ 277 (756)
-|...+-+ ..+|+|+|||.||..+. +++... | ..+.++|+.+++.
T Consensus 192 nI~~FGGD--p~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 192 NIAGFGGD--PSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HGGGGTEE--EEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred hhhhhccC--CcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 44444433 35899999999998554 444321 1 3589999998743
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=93.24 E-value=0.034 Score=59.98 Aligned_cols=99 Identities=13% Similarity=0.116 Sum_probs=59.0
Q ss_pred CCCCEEEEECCCCC---chhhHHHhHhhh--cCCcEEEEeccC----CC---CCC-------ChhHH---HHHHHHHHHH
Q 004396 177 KGSPTLLFLPGIDG---LGLGLILHHKPL--GKAFEVRCLHIP----VY---DRT-------PFEGL---VKFVEETVRR 234 (756)
Q Consensus 177 ~~~p~lV~lHG~~~---s~~~~~~~~~~L--~~gy~Vi~~Dl~----G~---G~S-------s~~~~---a~dv~~~i~~ 234 (756)
++.|++|++||.+. ++.........+ .++.-|+.+.+| |+ +.. .+.|+ .+.|.+-|..
T Consensus 104 ~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 183 (532)
T d1ea5a_ 104 KSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQF 183 (532)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeeccccccccccccccCCCCcccchhHHHHHHHHHHHHHh
Confidence 35799999999642 222111111222 456778888865 22 111 13333 2445555555
Q ss_pred hhccCCCCCEEEEEeChhhHHHHHHHHhC--CCcceEEEEeCCCC
Q 004396 235 EHASSPEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (756)
Q Consensus 235 l~~~~~~~~v~LvGhS~GG~vAl~~A~~~--P~~v~~lVLi~p~~ 277 (756)
.+-+ ..+|+|+|||.||..+..++... ...+.++|+.+...
T Consensus 184 FGGD--p~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~ 226 (532)
T d1ea5a_ 184 FGGD--PKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 226 (532)
T ss_dssp GTEE--EEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred hcCC--ccceEeeeecccccchhhhccCccchhhhhhheeecccc
Confidence 5444 35899999999998777665432 25799999988755
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.08 E-value=0.032 Score=60.02 Aligned_cols=99 Identities=10% Similarity=0.065 Sum_probs=60.0
Q ss_pred CCCCEEEEECCCCC---chhhHHHhHhhhcCCcEEEEeccC----CCCCC-----C----hhHH---HHHHHHHHHHhhc
Q 004396 177 KGSPTLLFLPGIDG---LGLGLILHHKPLGKAFEVRCLHIP----VYDRT-----P----FEGL---VKFVEETVRREHA 237 (756)
Q Consensus 177 ~~~p~lV~lHG~~~---s~~~~~~~~~~L~~gy~Vi~~Dl~----G~G~S-----s----~~~~---a~dv~~~i~~l~~ 237 (756)
++-|++|++||.+. ++..+....-...++.-|+.+.+| |+-.+ + +.|+ .+.|.+-|...+-
T Consensus 111 ~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGG 190 (532)
T d2h7ca1 111 NRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGG 190 (532)
T ss_dssp CCEEEEEEECCSTTTSCCSTTSCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTE
T ss_pred CCcEEEEEEeCCcccccccccCCchhhhhcCceEEEEEeeccCCCccccccccccccccccHHHHHHHHHHHHHHHHhcC
Confidence 34699999999743 232222111111456788888875 22111 1 2333 2445555555444
Q ss_pred cCCCCCEEEEEeChhhHHHHHHHHh--CCCcceEEEEeCCCC
Q 004396 238 SSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (756)
Q Consensus 238 ~~~~~~v~LvGhS~GG~vAl~~A~~--~P~~v~~lVLi~p~~ 277 (756)
+ ..+|+|+|||.||..+..++.. ....+.++|+.++..
T Consensus 191 D--p~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 191 N--PGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp E--EEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred C--cceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 3 3489999999999877766653 235789999988754
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=92.92 E-value=0.44 Score=43.46 Aligned_cols=72 Identities=13% Similarity=0.028 Sum_probs=49.0
Q ss_pred CCcEEEEeccCCCC--------CCChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhCC----CcceEEE
Q 004396 204 KAFEVRCLHIPVYD--------RTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP----TIDLILI 271 (756)
Q Consensus 204 ~gy~Vi~~Dl~G~G--------~Ss~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~P----~~v~~lV 271 (756)
....+..++++-.. ..+...=+.++...+.....+-|+.+++|+|+|.|+.++-.++...+ ++|.+++
T Consensus 50 ~~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avv 129 (197)
T d1cexa_ 50 DGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTV 129 (197)
T ss_dssp TTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEE
T ss_pred CcceEeeeccccccccccccccccchhHHHHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEE
Confidence 44667677654221 11233344555555555555578889999999999999999887654 6788998
Q ss_pred EeCC
Q 004396 272 LSNP 275 (756)
Q Consensus 272 Li~p 275 (756)
|+.-
T Consensus 130 lfGD 133 (197)
T d1cexa_ 130 LFGY 133 (197)
T ss_dssp EESC
T ss_pred EEeC
Confidence 8764
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.10 E-value=0.067 Score=57.36 Aligned_cols=99 Identities=15% Similarity=0.140 Sum_probs=58.7
Q ss_pred CCCCEEEEECCCCCc---hhhHHHhHhhh--cCCcEEEEeccC----CC----CCC--C----hhHH---HHHHHHHHHH
Q 004396 177 KGSPTLLFLPGIDGL---GLGLILHHKPL--GKAFEVRCLHIP----VY----DRT--P----FEGL---VKFVEETVRR 234 (756)
Q Consensus 177 ~~~p~lV~lHG~~~s---~~~~~~~~~~L--~~gy~Vi~~Dl~----G~----G~S--s----~~~~---a~dv~~~i~~ 234 (756)
++.|++|++||.+.. +.....-...+ .++.-|+.+.+| |+ +.. + +.|+ .+.|.+-|+.
T Consensus 102 ~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 181 (526)
T d1p0ia_ 102 KNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAA 181 (526)
T ss_dssp SSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCcccccccccccchhhhhhhHHHHHHH
Confidence 357999999987422 22221112222 346778888865 21 111 1 3333 3445555555
Q ss_pred hhccCCCCCEEEEEeChhhHHHHHHHHh--CCCcceEEEEeCCCC
Q 004396 235 EHASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (756)
Q Consensus 235 l~~~~~~~~v~LvGhS~GG~vAl~~A~~--~P~~v~~lVLi~p~~ 277 (756)
.+-+ ..+|+|+|+|.||..+..++.. ....+.++|+.++..
T Consensus 182 FGGD--p~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~ 224 (526)
T d1p0ia_ 182 FGGN--PKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 224 (526)
T ss_dssp GTEE--EEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred hhcC--chheeehhhccccceeeccccCCcchhhhhhhhcccccc
Confidence 4443 3589999999999987655542 225788999988654
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=92.08 E-value=0.1 Score=55.87 Aligned_cols=98 Identities=11% Similarity=0.088 Sum_probs=57.6
Q ss_pred CCCEEEEECCCC---CchhhH--HHhHhhhcCCcEEEEeccCC----CCCC-----------ChhHH---HHHHHHHHHH
Q 004396 178 GSPTLLFLPGID---GLGLGL--ILHHKPLGKAFEVRCLHIPV----YDRT-----------PFEGL---VKFVEETVRR 234 (756)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~--~~~~~~L~~gy~Vi~~Dl~G----~G~S-----------s~~~~---a~dv~~~i~~ 234 (756)
+-|++|++||.+ +++..+ ......-.++.-|+.+.+|= +=.+ .+.|+ .+.|.+-|..
T Consensus 96 ~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~~ 175 (517)
T d1ukca_ 96 KLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQ 175 (517)
T ss_dssp CEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGG
T ss_pred CceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccceeecCccccccccccchhHHHHHHHHHHHHHHHHh
Confidence 359999999973 222222 22222224556788888763 1111 12233 3444555555
Q ss_pred hhccCCCCCEEEEEeChhhHHHHHHHHh----CCCcceEEEEeCCCC
Q 004396 235 EHASSPEKPIYLVGDSFGGCLALAVAAR----NPTIDLILILSNPAT 277 (756)
Q Consensus 235 l~~~~~~~~v~LvGhS~GG~vAl~~A~~----~P~~v~~lVLi~p~~ 277 (756)
.+.+ ..+|+|+|||.||..+...+.. ....+.++|+.++..
T Consensus 176 FGGD--p~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~ 220 (517)
T d1ukca_ 176 FGGD--PDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 220 (517)
T ss_dssp GTEE--EEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred hcCC--cccccccccccchhhHHHHHhccccccccccceeeeccccc
Confidence 4443 3589999999999876544332 224899999988754
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=89.98 E-value=0.11 Score=56.48 Aligned_cols=98 Identities=13% Similarity=0.126 Sum_probs=57.4
Q ss_pred CCCEEEEECCCCC---chhhHH------HhHhhh--cCCcEEEEeccC----CC---CCC------ChhHH---HHHHHH
Q 004396 178 GSPTLLFLPGIDG---LGLGLI------LHHKPL--GKAFEVRCLHIP----VY---DRT------PFEGL---VKFVEE 230 (756)
Q Consensus 178 ~~p~lV~lHG~~~---s~~~~~------~~~~~L--~~gy~Vi~~Dl~----G~---G~S------s~~~~---a~dv~~ 230 (756)
+-|++|++||.+- ++.... .-...| ..+.-|+.+.+| |+ +.. -+.|+ .+.|.+
T Consensus 97 ~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~ 176 (579)
T d2bcea_ 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKR 176 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccccCCCccchhhHHHHHHHHHhh
Confidence 4699999999742 221111 011233 234778888876 22 111 13333 344555
Q ss_pred HHHHhhccCCCCCEEEEEeChhhHHHHHHHHh--CCCcceEEEEeCCCC
Q 004396 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (756)
Q Consensus 231 ~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~--~P~~v~~lVLi~p~~ 277 (756)
-|...+-+ ..+|+|+|||.||..+..++.. ....+.++|+.++..
T Consensus 177 nI~~FGGD--P~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 177 NIEAFGGD--PDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HGGGGTEE--EEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred hhhhhccC--cCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 55554443 3489999999999877765543 236899999988654
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=89.42 E-value=0.2 Score=54.08 Aligned_cols=99 Identities=11% Similarity=0.064 Sum_probs=56.5
Q ss_pred CCCCEEEEECCCCC---chhhHHHhHhhh-c-CCcEEEEeccC----CCC-------------CC---ChhHHH---HHH
Q 004396 177 KGSPTLLFLPGIDG---LGLGLILHHKPL-G-KAFEVRCLHIP----VYD-------------RT---PFEGLV---KFV 228 (756)
Q Consensus 177 ~~~p~lV~lHG~~~---s~~~~~~~~~~L-~-~gy~Vi~~Dl~----G~G-------------~S---s~~~~a---~dv 228 (756)
++-|++|++||.+. ++.....-...| + ...-|+++.+| |+= .+ .+.|+. +.|
T Consensus 137 ~~lPV~V~ihGG~f~~Gs~~~~~~~~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~WV 216 (571)
T d1dx4a_ 137 NGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWL 216 (571)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCccCCCCcccccchhhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHHHH
Confidence 45799999999642 222211122233 2 34666777765 221 01 133332 333
Q ss_pred HHHHHHhhccCCCCCEEEEEeChhhHHHHHHHHhC--CCcceEEEEeCCCC
Q 004396 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (756)
Q Consensus 229 ~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~~~--P~~v~~lVLi~p~~ 277 (756)
.+-|...+-+ ..+|+|+|||.||..+..++... ...+.++|+.+...
T Consensus 217 ~~nI~~FGGD--P~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 217 KDNAHAFGGN--PEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 265 (571)
T ss_dssp HHSTGGGTEE--EEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHhhhhhccC--CCceEeccccCccceeeeeeccccccccccccceecccc
Confidence 3444443333 35899999999998887665442 25788999987654
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=88.10 E-value=1.1 Score=41.18 Aligned_cols=57 Identities=16% Similarity=0.172 Sum_probs=41.8
Q ss_pred CcEEEEeccCCCCCC------C----hhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHH
Q 004396 205 AFEVRCLHIPVYDRT------P----FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAA 261 (756)
Q Consensus 205 gy~Vi~~Dl~G~G~S------s----~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~ 261 (756)
+-.+..+++|..-.. + ..+=+.++...|+....+-|+.+++|+|+|.|+.++-.++.
T Consensus 35 ~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~ 101 (207)
T d1qoza_ 35 GTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp TEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHH
T ss_pred CCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHh
Confidence 467788898875322 2 33445556666666666678889999999999999988874
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=85.87 E-value=1.9 Score=39.33 Aligned_cols=63 Identities=17% Similarity=0.186 Sum_probs=43.2
Q ss_pred hHhhhcCCcEEEEeccCCCCCC----------ChhHHHHHHHHHHHHhhccCCCCCEEEEEeChhhHHHHHHHH
Q 004396 198 HHKPLGKAFEVRCLHIPVYDRT----------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAA 261 (756)
Q Consensus 198 ~~~~L~~gy~Vi~~Dl~G~G~S----------s~~~~a~dv~~~i~~l~~~~~~~~v~LvGhS~GG~vAl~~A~ 261 (756)
+.+.+ .+-.+..+++|..... |..+=+..+...|+....+-|+.+++|+|+|.|+.++-.++.
T Consensus 29 ~~~~~-~~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~ 101 (207)
T d1g66a_ 29 VLSAY-PGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp HHHHS-TTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHH
T ss_pred HHHhc-CCCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHHHHh
Confidence 33444 2457888899864321 233344556666666666678889999999999999988764
|