Citrus Sinensis ID: 004398

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750------

MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVDSSTLDSETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTVGSSENLKGDNSVHRGEDPTTSGGDGRVGLESNQDSMDSLSVSVQRQGTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKVGW

ccccccccEEcccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccEEEEEEccccccccccHHHHHHHHccccccccccccccccccEEcccccccccEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccHHHHHHHcccccccccccccEEEEccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEcccccHHHcccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccHHHccccccccccccccccHHHHHHHHHHHcccccccEEcccccccEEEcccccccccccccc

cccccEEEEEcccccccccccEEEEcccccccccccEEEEcccccccccccccccccEEEcccccccccccccccccccccccccccccccccccEEEEcccEEEccccccccHHHHHHHcccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccHHHHcHHHHHHHHHHHHcccccccccccEEEEEccccccccccccccccccccccccccccccccccccEEEEcccccccEEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccHHcccccccccccccccccccccccHHccccccccEEEcccccccHHHcccccccccccccccEEEEEcccEEccccccccccccccHHHHHHHHHHHHccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccEEEEEEEEcccEEEEEcccccEEEEEEcccccccccHEEEcccccccccHHHHHHHHHHHHcccccccccHccEEEEccccccccccccEEEEEEcccccccHHHHHHHHHHHccccccEEEcccEEEEEEEEEHHcHHHcccccc

mgngtsrvvgcfvpfngksgvdleflepldeglghsfcyvrpsifdspaitpsnserftvdsstldsetlsgsfrhdslddpsglhkpksfpettfktisgasvsanvstartgnqsalfasdvqepaasfestasfaaiplqpvprgsgplngfmsgplergfasgpldrgggfmsgpiergvmsgpldasdksnfsaplargrrrprlhrlmrsvsgpmrntlsrtfskhtmgsgwmerfflhPVTRLAWQVKEAKYRSEAQRncleggpsegeygnscnlqwahgkagedRVHVVLSEEQGWLFIgiydgfsgpdapdfLMSHLYRAIDKELEGLLwdyedksptdhpelghpkcqnagisvegtkvdqpelclnkvsycnlkescnssgmsreqSFTCEIVeesgevtgctrngnitgrgrkSMRLYELLQIEswdgqgstlisdigperkgssdcqacqdtvgssenlkgdnsvhrgedpttsggdgrvglesnqdsmDSLSVSVQRQGTRKSLISSKIRKMYRKQKSLrkklfpwsydwhreepcidermvessgpirkcksgiiDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAIlaqerpndrhpnpsflkddsrhknrsrESLVRMELdriseespmhnqncqvnmmnknrdiSICRLKMRAVQlstdhstsVEEEIIRIkaehpddsqavfNDRVKGQLKVTRAFGAGFLKKVGW

MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFdspaitpsnserftvdsstldsETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSgpldasdksnfsaplargrrrprlhrlmrsvsgpmrntlsrtfsKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCeiveesgevtgctrngnitgrgrkSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTVgssenlkgdnsvhrgedpttsggdgrVGLESNQDSmdslsvsvqrqgtrkslisskirkmyrkqkslrkklfpwsydwhreepcidermvessgpiRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILaqerpndrhpnpsflkddsrhknrsreSLVRMeldriseespmhnqncqvnMMNKNRDISICRLKMRAVqlstdhstsVEEEIIRIkaehpddsqavfndRVKGQLKVTRafgagflkkvgw

MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVDSSTLDSETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPaasfestasfaaIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSGPLDASDKSNFSAPlargrrrprlhrlmrSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTVGSSENLKGDNSVHRGEDPTTSGGDGRVGLESNQDSMDSLSVSVQRQGTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKVGW

******RVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFD*****************************************************************************************************************************************************************************************HTMGSGWMERFFLHPVTRLAWQVKEAKYR****************YGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYE*******************I*VEGTKVDQPELCLNKVSYCNLKE************FTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTL***************************************************************************************LRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAI**********************************************************DISICRLKMRAVQL***********II************VFNDRVKGQLKVTRAFGAGFLK****

***GTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSP*****************************************SFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQP***************************************V**************************************************************************************************LQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLL****************************************************************************************************************************************************SGGDGRVGLE***************************************KLFPWSYDWHREEPCIDERMVESSGPIR**********AVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPN*********************************ESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKVGW

MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVDSSTLDSETLSGSFRHDSLDDPSGLHKPKSFPETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQNAGISVEGTKVDQPELCLNKVSYCNLKES***********FTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGP***********QDTVGSSENLKGDNSVHRGEDPTTSGGDGRVGLESN******************SLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLK***********SLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQ*********EEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKVGW

**NGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTVD*******************************ETTFKTISGASVSANVSTARTGNQSALFASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLE*GFASGPLDRGGGFMSGPIERGVMS*************************RLMRSVS*PMRNTLSRTFSKHTMGSGWMERFFLHPVTRLAWQV*************************SCNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYED******************************LC*NKVSYCNLKESCNSSGMSR*QSFTCEIVEESGEVTGCTRNGNITGRGRKSMRLYELLQIESWDG*************************************************************************TRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPC*DERMV***********GIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKD*******S*ESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKKV**

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		756	2.2.26 [Sep-21-2011]
Q8RWN7		856	Protein phosphatase 2C 32	yes	no	0.928	0.820	0.648	0.0
Q9LQN6		662	Probable protein phosphat	no	no	0.407	0.465	0.401	9e-58
Q9ZV25		654	Probable protein phosphat	no	no	0.384	0.444	0.428	5e-57
O82302		783	Protein phosphatase 2C 29	no	no	0.301	0.291	0.442	1e-47
Q9LZ86		674	Probable protein phosphat	no	no	0.337	0.378	0.384	2e-45
Q84T94		639	Protein phosphatase 2C 35	no	no	0.330	0.391	0.381	1e-41
Q9SR24		650	Probable protein phosphat	no	no	0.199	0.232	0.510	3e-38
Q6ZGY0		596	Probable protein phosphat	no	no	0.210	0.266	0.470	5e-38
A3AZ89		593	Putative protein phosphat	no	no	0.218	0.278	0.439	1e-29
Q10NB9		631	Probable protein phosphat	no	no	0.218	0.261	0.416	7e-28

>sp\|Q8RWN7\|P2C32_ARATH Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=2	Back alignment and function desciption

 Score =  956 bits (2470), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/769 (64%), Positives = 587/769 (76%), Gaps = 67/769 (8%)

Query: 1   MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTV 60
           MGNGTSRVVGCFVP N K+GVDLEFLEPLDEGLGHSFCYVRPSIF+SP ITPSNSERFT+
Sbjct: 1   MGNGTSRVVGCFVPSNDKNGVDLEFLEPLDEGLGHSFCYVRPSIFESPDITPSNSERFTI 60

Query: 61  DSSTLDSETLSGSFRHDSLDDPSGL--HKPKSFPETTFKTISGASVSANVSTARTGNQSA 118
           DSST+DSETL+GSFR+D +DDPS L  H  K   ETTFK ISGASVSANVSTARTGNQ A
Sbjct: 61  DSSTIDSETLTGSFRNDIVDDPSFLNRHNSKGLAETTFKAISGASVSANVSTARTGNQMA 120

Query: 119 LFASDVQEPAASFESTASFAAIPLQPVPRG-SGPLNGFMSGPLERGFASGPLDRGGGFMS 177
           L +SDV EPAASFEST+SFA+IPLQP+PRG SGPLNGFMSGPLERGFASGPLDR  GFMS
Sbjct: 121 LCSSDVLEPAASFESTSSFASIPLQPLPRGGSGPLNGFMSGPLERGFASGPLDRNNGFMS 180

Query: 178 GPIERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSG 237
           GPIE+GVMSGPLD SD+SNFSAPL+  R++PR  R MRSVSGPM++TL+RTFS+ + G  
Sbjct: 181 GPIEKGVMSGPLDVSDRSNFSAPLSFRRKKPRFQRFMRSVSGPMKSTLARTFSRRSGGLS 240

Query: 238 WMERFFLHPVTRLAWQV-KEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVH 296
           WM RFFLHP TR++W V K+ K   E   +CLE         ++ NLQWAHGKAGEDRVH
Sbjct: 241 WMHRFFLHPETRVSWAVGKDGKLHGEDPESCLE---------SNRNLQWAHGKAGEDRVH 291

Query: 297 VVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKS------PTDH 350
           VVLSEEQGWLFIGIYDGFSGPDAPDF+MSHLY+AIDKELEGLLWDYE+ S      P   
Sbjct: 292 VVLSEEQGWLFIGIYDGFSGPDAPDFVMSHLYKAIDKELEGLLWDYEEPSEDNQLQPDQE 351

Query: 351 PELGHPKCQNAGISVEGTK---VDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEE 407
           P      C    IS + +K    +  E+ ++ +S     ++  + G              
Sbjct: 352 PPTEENMCDPESISEQHSKSVVAESEEVMIDDISSLGNTDTQIADGPP------------ 399

Query: 408 SGEVTGCTRNGNITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDCQACQDTV 467
                     G+  G G+KSMRLYELLQ+E W+G+      +IG +R G           
Sbjct: 400 ----------GDSAGPGKKSMRLYELLQLEQWEGE------EIGLKRYGG---------- 433

Query: 468 GSSENLKGDNSVHRGEDPTTSGGD-GRVGLESNQDSMDSLSVSVQRQGTRKSLISSKIRK 526
               N+  +N  ++ E+P+TSGG  G     +++ ++D +  S QR GT+KS ISSKIR+
Sbjct: 434 ----NVALNNMTNQVENPSTSGGGAGNDPCTTDRSALDGIPNSGQRHGTKKSQISSKIRR 489

Query: 527 MYRKQKSLRKKLFPWSYDWHREE-PCIDERMVESSGPIRKCKSGIIDHDAVLRAMAQALE 585
           MY+KQKSLRKKLFPWSYDWHREE  C++E++VESSGPIR+  SG +DHDAVLRAMA+ALE
Sbjct: 490 MYQKQKSLRKKLFPWSYDWHREEGICVEEKIVESSGPIRRRWSGTVDHDAVLRAMARALE 549

Query: 586 STEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPN 645
           STEEAYM+MVEK+LD NPELALMGSCVLVMLMKDQDVYVMN+GDSRAILAQER +DRH N
Sbjct: 550 STEEAYMDMVEKSLDINPELALMGSCVLVMLMKDQDVYVMNVGDSRAILAQERLHDRHSN 609

Query: 646 PSFLKDDSR-HKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQ 704
           P F  D+   HK+RSRESLVR+ELDRISEESP+HNQ   +++ NKNRD++  RLKMRAVQ
Sbjct: 610 PGFGNDEGIGHKSRSRESLVRIELDRISEESPIHNQATPISVSNKNRDVTSYRLKMRAVQ 669

Query: 705 LSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFLKK 753
           LS+DHSTSVEEEI RI++EHP+D Q++  DRVKGQLKVTRAFGAGFLKK
Sbjct: 670 LSSDHSTSVEEEIWRIRSEHPEDDQSILKDRVKGQLKVTRAFGAGFLKK 718

Involved in the regulation of pedicel length and of CLAVATA pathways controlling stem cell identity at shoot and flower meristems.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6

>sp\|Q9LQN6\|P2C04_ARATH Probable protein phosphatase 2C 4 OS=Arabidopsis thaliana GN=PLL5 PE=1 SV=1	Back alignment and function description

>sp\|Q9ZV25\|P2C23_ARATH Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana GN=PLL4 PE=2 SV=1	Back alignment and function description

>sp\|O82302\|P2C29_ARATH Protein phosphatase 2C 29 OS=Arabidopsis thaliana GN=PLL1 PE=1 SV=2	Back alignment and function description

>sp\|Q9LZ86\|P2C66_ARATH Probable protein phosphatase 2C 66 OS=Arabidopsis thaliana GN=PLL2 PE=2 SV=1	Back alignment and function description

>sp\|Q84T94\|P2C35_ORYSJ Protein phosphatase 2C 35 OS=Oryza sativa subsp. japonica GN=XB15 PE=1 SV=1	Back alignment and function description

>sp\|Q9SR24\|P2C36_ARATH Probable protein phosphatase 2C 36 OS=Arabidopsis thaliana GN=PLL3 PE=2 SV=1	Back alignment and function description

>sp\|Q6ZGY0\|P2C26_ORYSJ Probable protein phosphatase 2C 26 OS=Oryza sativa subsp. japonica GN=Os02g0690500 PE=2 SV=1	Back alignment and function description

>sp\|A3AZ89\|P2C46_ORYSJ Putative protein phosphatase 2C 46 OS=Oryza sativa subsp. japonica GN=Os05g0111800 PE=3 SV=2	Back alignment and function description

>sp\|Q10NB9\|P2C31_ORYSJ Probable protein phosphatase 2C 31 OS=Oryza sativa subsp. japonica GN=Os03g0275100 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		756
225437734		910	PREDICTED: protein phosphatase 2C 32-lik	0.993	0.825	0.745	0.0
255548189		907	protein phosphatase 2c, putative [Ricinu	0.989	0.824	0.749	0.0
224068295		882	predicted protein [Populus trichocarpa]	0.976	0.836	0.759	0.0
147855258		871	hypothetical protein VITISV_031357 [Viti	0.958	0.832	0.733	0.0
224130784		854	predicted protein [Populus trichocarpa]	0.958	0.848	0.753	0.0
356572864		887	PREDICTED: protein phosphatase 2C 32-lik	0.970	0.827	0.701	0.0
356505703		849	PREDICTED: protein phosphatase 2C 32-lik	0.948	0.844	0.715	0.0
30690550		856	membrane associated protein phosphatase	0.928	0.820	0.648	0.0
20260146		856	unknown protein [Arabidopsis thaliana]	0.928	0.820	0.648	0.0
3522957		814	unknown protein [Arabidopsis thaliana] g	0.928	0.862	0.648	0.0

>gi\|225437734\|ref\|XP_002280642.1\| PREDICTED: protein phosphatase 2C 32-like [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1172 bits (3033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/786 (74%), Positives = 649/786 (82%), Gaps = 35/786 (4%)

Query: 1   MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTV 60
           MGN TSRVVGCFVPFNGK GVDL+ LEPLDEGLGHSFCYVRP I DSPAITPSNSERFTV
Sbjct: 1   MGNSTSRVVGCFVPFNGKGGVDLDLLEPLDEGLGHSFCYVRPMILDSPAITPSNSERFTV 60

Query: 61  DSSTLDSETLSGSFRHDSLDDPSGLHKP-KSFPETTFKTISGASVSANVSTARTGNQSAL 119
           DSSTLDSETLSGSFRH+++DDPS +H+P K FPETTFK ISGASVSANVSTARTGN +AL
Sbjct: 61  DSSTLDSETLSGSFRHENIDDPSAVHRPNKCFPETTFKAISGASVSANVSTARTGNSNAL 120

Query: 120 FASDVQEPAASFESTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGP 179
           F SD QEPAASFEST+SFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPL+RGGGFMSGP
Sbjct: 121 FTSDAQEPAASFESTSSFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLERGGGFMSGP 180

Query: 180 IERGVMSGPLDASDKSNFSAPLARGRRRPRLHRLMRSVSGPMRNTLSRTFSKHTMGSGWM 239
           IE+GVMSGPLDA+DKSNFSAPLA GRRRP L RLMRSVSGPM++TLSRTFS+H++GS WM
Sbjct: 181 IEKGVMSGPLDATDKSNFSAPLAHGRRRPGLQRLMRSVSGPMKSTLSRTFSRHSIGSSWM 240

Query: 240 ERFFLHPVTRLAWQVKEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVHVVL 299
           +RFFLHPVT+ AW  +E K+R EA RNCL+ GPSEGEY  + NLQWAHGKAGEDRVHVVL
Sbjct: 241 QRFFLHPVTQFAWHPREPKFRPEAPRNCLDVGPSEGEYRKTHNLQWAHGKAGEDRVHVVL 300

Query: 300 SEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKSPTDHPELGHPKCQ 359
           SEEQGWLFIGIYDGFSGPDAPDFLMSHLY+AIDKELEGLLWDYE+KS  D   L  P  +
Sbjct: 301 SEEQGWLFIGIYDGFSGPDAPDFLMSHLYKAIDKELEGLLWDYEEKSVNDLLNLELPMNR 360

Query: 360 NAGISVEGTKVDQPELCLNKVSYCNLKESCNSSGMSREQSFTCEIVEESGEVTG------ 413
           +A +  E  K + P   LN+V    L+ESCN  G  R+    CEIVEE   V G      
Sbjct: 361 DATVDSECGKDNHPISQLNEVISGTLEESCN-PGTIRDHCSNCEIVEEKDGVRGVLELQS 419

Query: 414 -CTRNG------------NITGRGRKSMRLYELLQIESWDGQGSTLISDIGPERKGSSDC 460
            C + G            N+TG+GRKS RLYELLQ+ESWDG+ S  +S+ G +R+GS D 
Sbjct: 420 SCGKPGVLGVESIAAPTANLTGQGRKSKRLYELLQMESWDGESSLSVSEGGNQRRGSWDW 479

Query: 461 QACQDTVGSSENL-------------KGDNSVHRGEDPTTSGGDGRVGLESNQDSMDSLS 507
           Q   D + S   L             KGD+S    EDPTTSG +G + +ESN   +  LS
Sbjct: 480 QPSSDVLHSRGILQEEQLRSCSVTSTKGDSSSQYCEDPTTSGENGGIRMESNS-VLAPLS 538

Query: 508 VSVQRQGTRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREEPCIDERMVESSGPIRKCK 567
           VS QRQG RKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREE C+D+RM E+SGP+R+CK
Sbjct: 539 VSEQRQGMRKSLISSKIRKMYRKQKSLRKKLFPWSYDWHREETCVDDRMAETSGPVRRCK 598

Query: 568 SGIIDHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNL 627
           SG+IDHDAVLRAMA+ALE+TEEAYMEMVEKALD NPELALMGSCVLVMLMKDQDVYVMNL
Sbjct: 599 SGVIDHDAVLRAMARALETTEEAYMEMVEKALDKNPELALMGSCVLVMLMKDQDVYVMNL 658

Query: 628 GDSRAILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMM 687
           GDSR ILAQERPNDRHPNP+  KDD RH+NRSRESLVRMELDRISEESPMHNQNCQVN  
Sbjct: 659 GDSRVILAQERPNDRHPNPNLAKDDVRHRNRSRESLVRMELDRISEESPMHNQNCQVNKA 718

Query: 688 NKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFG 747
           NKNR+IS CRLKMRAVQLSTDHSTS+EEE++RIKAEH DD+QA+ NDRVKGQLKVTRAFG
Sbjct: 719 NKNREISFCRLKMRAVQLSTDHSTSIEEEVLRIKAEHVDDNQAILNDRVKGQLKVTRAFG 778

Query: 748 AGFLKK 753
           AGFLK+
Sbjct: 779 AGFLKE 784

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255548189\|ref\|XP_002515151.1\| protein phosphatase 2c, putative [Ricinus communis] gi\|223545631\|gb\|EEF47135.1\| protein phosphatase 2c, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224068295\|ref\|XP_002302697.1\| predicted protein [Populus trichocarpa] gi\|222844423\|gb\|EEE81970.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|147855258\|emb\|CAN83867.1\| hypothetical protein VITISV_031357 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224130784\|ref\|XP_002320925.1\| predicted protein [Populus trichocarpa] gi\|222861698\|gb\|EEE99240.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356572864\|ref\|XP_003554585.1\| PREDICTED: protein phosphatase 2C 32-like [Glycine max]	Back alignment and taxonomy information

>gi\|356505703\|ref\|XP_003521629.1\| PREDICTED: protein phosphatase 2C 32-like [Glycine max]	Back alignment and taxonomy information

>gi|30690550|ref|NP_850463.1| membrane associated protein phosphatase 2C [Arabidopsis thaliana] gi|30690552|ref|NP_850464.1| membrane associated protein phosphatase 2C [Arabidopsis thaliana] gi|332278134|sp|Q8RWN7.2|P2C32_ARATH RecName: Full=Protein phosphatase 2C 32; Short=AtPP2C32; AltName: Full=Protein POLTERGEIST; AltName: Full=Protein phosphatase 2C POL; Short=PP2C POL gi|330255678|gb|AEC10772.1| membrane associated protein phosphatase 2C [Arabidopsis thaliana] gi|330255679|gb|AEC10773.1| membrane associated protein phosphatase 2C [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|20260146\|gb\|AAM12971.1\| unknown protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|3522957\|gb\|AAC34239.1\| unknown protein [Arabidopsis thaliana] gi\|227202644\|dbj\|BAH56795.1\| AT2G46920 [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		756
TAIR\|locus:2041444		856	POL "poltergeist" [Arabidopsis	0.492	0.434	0.659	5.5e-237
TAIR\|locus:2026605		662	PLL5 "pol-like 5" [Arabidopsis	0.376	0.430	0.398	1.6e-88
TAIR\|locus:2053265		654	PLL4 "poltergeist like 4" [Ara	0.354	0.409	0.414	5.7e-82
TAIR\|locus:2062481		783	PLL1 "poltergeist like 1" [Ara	0.339	0.328	0.420	1.2e-73
TAIR\|locus:2083539		650	PLL3 "pol-like 3" [Arabidopsis	0.316	0.367	0.361	7.5e-70
TAIR\|locus:2180152		674	PLL2 "pol-like 2" [Arabidopsis	0.440	0.494	0.340	6.2e-55
TAIR\|locus:2089293		493	AT3G16560 [Arabidopsis thalian	0.078	0.119	0.559	1.9e-19
TAIR\|locus:2118899		380	AT4G33920 [Arabidopsis thalian	0.070	0.139	0.452	1.4e-14
TAIR\|locus:2081770		379	AT3G51370 [Arabidopsis thalian	0.072	0.145	0.418	2.2e-12
TAIR\|locus:2151256		370	AT5G02760 [Arabidopsis thalian	0.080	0.164	0.370	7.9e-11

TAIR\|locus:2041444 POL "poltergeist" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1291 (459.5 bits), Expect = 5.5e-237, Sum P(2) = 5.5e-237
 Identities = 260/394 (65%), Positives = 292/394 (74%)

Query:     1 MGNGTSRVVGCFVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFDSPAITPSNSERFTV 60
             MGNGTSRVVGCFVP N K+GVDLEFLEPLDEGLGHSFCYVRPSIF+SP ITPSNSERFT+
Sbjct:     1 MGNGTSRVVGCFVPSNDKNGVDLEFLEPLDEGLGHSFCYVRPSIFESPDITPSNSERFTI 60

Query:    61 DSSTLDSETLSGSFRHDSLDDPSGL--HKPKSFPETTFKTISGASVSANVSTARTGNQSA 118
             DSST+DSETL+GSFR+D +DDPS L  H  K   ETTFK ISGASVSANVSTARTGNQ A
Sbjct:    61 DSSTIDSETLTGSFRNDIVDDPSFLNRHNSKGLAETTFKAISGASVSANVSTARTGNQMA 120

Query:   119 LFASDVQEPXXXXXXXXXXXXIPLQPVPRG-SGPLNGFMSGPLERGFASGPLDRGGGFMS 177
             L +SDV EP            IPLQP+PRG SGPLNGFMSGPLERGFASGPLDR  GFMS
Sbjct:   121 LCSSDVLEPAASFESTSSFASIPLQPLPRGGSGPLNGFMSGPLERGFASGPLDRNNGFMS 180

Query:   178 GPIERGVMSGPLDASDKSNFSAPXXXXXXXXXXXXXXXSVSGPMRNTLSRTFSKHTMGSG 237
             GPIE+GVMSGPLD SD+SNFSAP               SVSGPM++TL+RTFS+ + G  
Sbjct:   181 GPIEKGVMSGPLDVSDRSNFSAPLSFRRKKPRFQRFMRSVSGPMKSTLARTFSRRSGGLS 240

Query:   238 WMERFFLHPVTRLAWQV-KEAKYRSEAQRNCLEGGPSEGEYGNSCNLQWAHGKAGEDRVH 296
             WM RFFLHP TR++W V K+ K   E   +CLE         ++ NLQWAHGKAGEDRVH
Sbjct:   241 WMHRFFLHPETRVSWAVGKDGKLHGEDPESCLE---------SNRNLQWAHGKAGEDRVH 291

Query:   297 VVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDKS------PTDH 350
             VVLSEEQGWLFIGIYDGFSGPDAPDF+MSHLY+AIDKELEGLLWDYE+ S      P   
Sbjct:   292 VVLSEEQGWLFIGIYDGFSGPDAPDFVMSHLYKAIDKELEGLLWDYEEPSEDNQLQPDQE 351

Query:   351 PELGHPKCQNAGISVEGTK---VDQPELCLNKVS 381
             P      C    IS + +K    +  E+ ++ +S
Sbjct:   352 PPTEENMCDPESISEQHSKSVVAESEEVMIDDIS 385

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS;IDA

GO:0005634 "nucleus" evidence=ISM;NAS

GO:0009934 "regulation of meristem structural organization" evidence=IGI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IGI;RCA

GO:0010074 "maintenance of meristem identity" evidence=IGI;RCA

GO:0005543 "phospholipid binding" evidence=IDA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006406 "mRNA export from nucleus" evidence=RCA

GO:0007155 "cell adhesion" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0043687 "post-translational protein modification" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR\|locus:2026605 PLL5 "pol-like 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2053265 PLL4 "poltergeist like 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2062481 PLL1 "poltergeist like 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2083539 PLL3 "pol-like 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2180152 PLL2 "pol-like 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2089293 AT3G16560 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2118899 AT4G33920 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2081770 AT3G51370 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2151256 AT5G02760 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8RWN7	P2C32_ARATH	3, ., 1, ., 3, ., 1, 6	0.6488	0.9285	0.8200	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3.16	0.946
3rd Layer	3.1.3	0.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		756
cd00143		254	cd00143, PP2Cc, Serine/threonine phosphatases, fam	1e-14
smart00332		252	smart00332, PP2Cc, Serine/threonine phosphatases,	6e-09
pfam00481		252	pfam00481, PP2C, Protein phosphatase 2C	1e-06
smart00332		252	smart00332, PP2Cc, Serine/threonine phosphatases,	7e-06
cd00143		254	cd00143, PP2Cc, Serine/threonine phosphatases, fam	5e-05
pfam00481		252	pfam00481, PP2C, Protein phosphatase 2C	6e-04

>gnl\|CDD\|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity	Back alignment and domain information

 Score = 74.3 bits (183), Expect = 1e-14
 Identities = 42/182 (23%), Positives = 58/182 (31%), Gaps = 70/182 (38%)

Query: 572 DHDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSR 631
             + +  A+ +A    +E  +E         P+ A  G+  +V L++   +YV N+G   
Sbjct: 67  SEEDIEEALRKAFLRADEEILEE----AQDEPDDARSGTTAVVALIRGNKLYVANVG--- 119

Query: 632 AILAQERPNDRHPNPSFLKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNR 691
                               DSR                                     
Sbjct: 120 --------------------DSR------------------------------------- 122

Query: 692 DISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFNDRVKGQLKVTRAFGAGFL 751
              +CR    AVQL+ DH    EEE  RI+         V N RV G L VTRA G   L
Sbjct: 123 -AVLCR-NGEAVQLTKDHKPVNEEERERIEKAG----GRVSNGRVPGVLAVTRALGDFDL 176

Query: 752 KK 753
           K 
Sbjct: 177 KP 178

Length = 254

>gnl\|CDD\|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain	Back alignment and domain information

>gnl\|CDD\|215938 pfam00481, PP2C, Protein phosphatase 2C	Back alignment and domain information

>gnl\|CDD\|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain	Back alignment and domain information

>gnl\|CDD\|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity	Back alignment and domain information

>gnl\|CDD\|215938 pfam00481, PP2C, Protein phosphatase 2C	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		756
KOG0700		390	consensus Protein phosphatase 2C/pyruvate dehydrog	100.0
KOG0698		330	consensus Serine/threonine protein phosphatase [Si	99.9
PF00481		254	PP2C: Protein phosphatase 2C; InterPro: IPR001932	99.89
PLN03145		365	Protein phosphatase 2c; Provisional	99.87
PTZ00224		381	protein phosphatase 2C; Provisional	99.79
KOG0697		379	consensus Protein phosphatase 1B (formerly 2C) [Si	99.67
KOG0699		542	consensus Serine/threonine protein phosphatase [Si	99.6
COG0631		262	PTC1 Serine/threonine protein phosphatase [Signal	99.44
smart00332		255	PP2Cc Serine/threonine phosphatases, family 2C, ca	99.38
cd00143		254	PP2Cc Serine/threonine phosphatases, family 2C, ca	99.35
KOG1323		493	consensus Serine/threonine phosphatase [Signal tra	99.2
PRK14559		645	putative protein serine/threonine phosphatase; Pro	99.19
PF13672		212	PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A	97.18
KOG0618		1081	consensus Serine/threonine phosphatase 2C containi	96.2
smart00331		193	PP2C_SIG Sigma factor PP2C-like phosphatases.	95.07
KOG1379		330	consensus Serine/threonine protein phosphatase [Si	92.92
PF07228		193	SpoIIE: Stage II sporulation protein E (SpoIIE); I	80.22

>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]	Back alignment and domain information

Probab=100.00  E-value=5.8e-62  Score=519.81  Aligned_cols=128  Identities=55%  Similarity=0.850  Sum_probs=121.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccCCCceEEEEEEECCeEEEEEcCcceEEEEecCCCCCCCCCCCcccc
Q 004398          573 HDAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDD  652 (756)
Q Consensus       573 h~~VlrAL~rAf~~TEeafLemadk~l~enpeLalmGSTaLVmLIkdedVYVANVGDSRAVLar~~~~~~~pn~~~~k~~  652 (756)
                      |.+|++||.+||++||++|++++++++..+|++|.|||||||++|++.+|||||+|||||||++....+           
T Consensus       166 ~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~-----------  234 (390)
T KOG0700|consen  166 HGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNG-----------  234 (390)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCC-----------
Confidence            778999999999999999999999999999999999999999999999999999999999998876321           


Q ss_pred             ccccccchhhhHhhhhhcccccCCccccchhhhcccccchhhhhccccceeecCCCCCCCcHHHHHHHHHcCCCCCCcee
Q 004398          653 SRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVF  732 (756)
Q Consensus       653 ~g~r~~Sr~~~~~~eleri~eES~~~~~~~e~~~~n~~~e~~~~~~~l~AlQLT~DHSps~eEEr~RIkaehPDd~~~I~  732 (756)
                                                                   ..|.|+|||+||++++++|++||+++||||+++|+
T Consensus       235 ---------------------------------------------~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv  269 (390)
T KOG0700|consen  235 ---------------------------------------------SWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVV  269 (390)
T ss_pred             ---------------------------------------------CeEEEEecChhhccccHHHHHHHHHhCCCCcceEe
Confidence                                                         12689999999999999999999999999999999


Q ss_pred             cC--cccCccccccccccCCccccCC
Q 004398          733 ND--RVKGQLKVTRAFGAGFLKKVGW  756 (756)
Q Consensus       733 nd--RVkG~LaVTRAFGDg~LKqPk~  756 (756)
                      ++  ||||.|+|||||||++||+|+|
T Consensus       270 ~~~~RvkG~L~vsRAfGd~~lK~~~~  295 (390)
T KOG0700|consen  270 NKHWRVKGILQVSRAFGDGYLKWPEF  295 (390)
T ss_pred             eccceeeEEEEeeeeccceeecchhh
Confidence            98  9999999999999999999997

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]	Back alignment and domain information

>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg	Back alignment and domain information

>PLN03145 Protein phosphatase 2c; Provisional	Back alignment and domain information

>PTZ00224 protein phosphatase 2C; Provisional	Back alignment and domain information

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]	Back alignment and domain information

>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]	Back alignment and domain information

>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]	Back alignment and domain information

>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain	Back alignment and domain information

>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity	Back alignment and domain information

>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]	Back alignment and domain information

>PRK14559 putative protein serine/threonine phosphatase; Provisional	Back alignment and domain information

>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B	Back alignment and domain information

>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]	Back alignment and domain information

>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases	Back alignment and domain information

>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]	Back alignment and domain information

>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		756
2pnq_A		467	[pyruvate dehydrogenase [lipoamide]]-phosphatase 1	2e-12
2pnq_A		467	[pyruvate dehydrogenase [lipoamide]]-phosphatase 1	4e-07
2j4o_A		401	Mitogen-activated protein kinase kinase kinase 7-i	1e-09
2j4o_A		401	Mitogen-activated protein kinase kinase kinase 7-i	1e-04
2i44_A		324	Serine-threonine phosphatase 2C; PSI-2, 8817Z, str	1e-06
1a6q_A		382	Phosphatase 2C; catalytic mechanism, metalloenzyme	9e-06
1a6q_A		382	Phosphatase 2C; catalytic mechanism, metalloenzyme	2e-04
2i0o_A		304	Ser/Thr phosphatase; beta sandwich, structural gen	9e-06
2i0o_A		304	Ser/Thr phosphatase; beta sandwich, structural gen	1e-04
2p8e_A		307	PPM1B beta isoform variant 6; structural genomics,	1e-05
2p8e_A		307	PPM1B beta isoform variant 6; structural genomics,	2e-04
2iq1_A		274	Protein phosphatase 2C kappa, PPM1K; structural ge	1e-05
2iq1_A		274	Protein phosphatase 2C kappa, PPM1K; structural ge	4e-04
4da1_A		389	Protein phosphatase 1K, mitochondrial; metal-ION-a	3e-05
4da1_A		389	Protein phosphatase 1K, mitochondrial; metal-ION-a	7e-04
3kdj_B		316	Protein phosphatase 2C 56; ABA, PYL1, abscisic aci	4e-05
3kdj_B		316	Protein phosphatase 2C 56; ABA, PYL1, abscisic aci	1e-04
2isn_A		364	NYSGXRC-8828Z, phosphatase; pathogenic strain, pra	9e-05
3qn1_B		337	Protein phosphatase 2C 16; start domain, BET V dom	1e-04
3qn1_B		337	Protein phosphatase 2C 16; start domain, BET V dom	8e-04
3d8k_A		377	PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR	1e-04
2irm_A		358	Mitogen-activated protein kinase kinase kinase 7 i	2e-04
2irm_A		358	Mitogen-activated protein kinase kinase kinase 7 i	4e-04

>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467	Back alignment and structure

 Score = 69.4 bits (169), Expect = 2e-12
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 699 KMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVF--NDRVKGQLKVTRAFGAGFLKK 753
              AV LS DH+   E E+ R+K EHP +        DR+ G L   RAFG    K 
Sbjct: 233 SWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKW 289

PyMOL of 2pnq

>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467	Back alignment and structure

>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401	Back alignment and structure

>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401	Back alignment and structure

>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324	Back alignment and structure

>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382	Back alignment and structure

>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382	Back alignment and structure

>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304	Back alignment and structure

>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304	Back alignment and structure

>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307	Back alignment and structure

>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307	Back alignment and structure

>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274	Back alignment and structure

>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274	Back alignment and structure

>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389	Back alignment and structure

>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389	Back alignment and structure

>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316	Back alignment and structure

>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316	Back alignment and structure

>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364	Back alignment and structure

>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337	Back alignment and structure

>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337	Back alignment and structure

>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377	Back alignment and structure

>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358	Back alignment and structure

>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		756
2pnq_A		467	[pyruvate dehydrogenase [lipoamide]]-phosphatase 1	99.94
2irm_A		358	Mitogen-activated protein kinase kinase kinase 7 i	99.88
2i0o_A		304	Ser/Thr phosphatase; beta sandwich, structural gen	99.87
2p8e_A		307	PPM1B beta isoform variant 6; structural genomics,	99.86
2j4o_A		401	Mitogen-activated protein kinase kinase kinase 7-i	99.86
1a6q_A		382	Phosphatase 2C; catalytic mechanism, metalloenzyme	99.85
3qn1_B		337	Protein phosphatase 2C 16; start domain, BET V dom	99.84
2iq1_A		274	Protein phosphatase 2C kappa, PPM1K; structural ge	99.81
3kdj_B		316	Protein phosphatase 2C 56; ABA, PYL1, abscisic aci	99.8
3d8k_A		377	PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR	99.8
4da1_A		389	Protein phosphatase 1K, mitochondrial; metal-ION-a	99.77
2isn_A		364	NYSGXRC-8828Z, phosphatase; pathogenic strain, pra	99.77
2i44_A		324	Serine-threonine phosphatase 2C; PSI-2, 8817Z, str	99.76
2pk0_A		250	Serine/threonine protein phosphatase STP1; SI moti	99.52
2j82_A		240	TPPHA, protein serine-threonine phosphatase; PP2C	99.48
3rnr_A		211	Stage II sporulation E family protein; structural	99.25
1txo_A		237	Putative bacterial enzyme; serine/threonine protei	99.21
2jfr_A		234	Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata	99.1
3t91_A		242	Stage II sporulation protein E; SPOIIE, phosphatas	95.08
3pu9_A		242	Protein serine/threonine phosphatase; PSI-biology,	92.38
3f79_A		255	Probable two-component response regulator; adaptor	87.18
1txo_A		237	Putative bacterial enzyme; serine/threonine protei	84.64

>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A	Back alignment and structure

Probab=99.94  E-value=4.2e-27  Score=257.24  Aligned_cols=123  Identities=31%  Similarity=0.358  Sum_probs=102.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh------hhcCCCccCCCceEEEEEEECCeEEEEEcCcceEEEEecCCCCCCCCCCC
Q 004398          575 AVLRAMAQALESTEEAYMEMVEKA------LDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSF  648 (756)
Q Consensus       575 ~VlrAL~rAf~~TEeafLemadk~------l~enpeLalmGSTaLVmLIkdedVYVANVGDSRAVLar~~~~~~~pn~~~  648 (756)
                      ++.+||.+||.+++++|++.+...      ...+++...|||||+|+||.++.+||||||||||||++...+        
T Consensus       160 ~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~--------  231 (467)
T 2pnq_A          160 DVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEED--------  231 (467)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTT--------
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCC--------
Confidence            478899999999999998766420      111334567999999999999999999999999999986411        


Q ss_pred             ccccccccccchhhhHhhhhhcccccCCccccchhhhcccccchhhhhccccceeecCCCCCCCcHHHHHHHHHcCCCCC
Q 004398          649 LKDDSRHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDS  728 (756)
Q Consensus       649 ~k~~~g~r~~Sr~~~~~~eleri~eES~~~~~~~e~~~~n~~~e~~~~~~~l~AlQLT~DHSps~eEEr~RIkaehPDd~  728 (756)
                                                                       ..|.+.|||.||++.+++|++||+++||...
T Consensus       232 -------------------------------------------------g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~  262 (467)
T 2pnq_A          232 -------------------------------------------------GSWSAVTLSNDHNAQNERELQRLKLEHPKNE  262 (467)
T ss_dssp             -------------------------------------------------SCEEEEECCCCCSTTCHHHHHHHHHTSCGGG
T ss_pred             -------------------------------------------------CcEEEEECCCCCCCCCHHHHHHHHHcCCCcc
Confidence                                                             1247899999999999999999999998753


Q ss_pred             --CceecCcccCccccccccccCCcccc
Q 004398          729 --QAVFNDRVKGQLKVTRAFGAGFLKKV  754 (756)
Q Consensus       729 --~~I~ndRVkG~LaVTRAFGDg~LKqP  754 (756)
                        .++.++||+|.|+|||||||.+||++
T Consensus       263 ~~~~~~~~Rv~G~l~vtRAlGd~~~K~~  290 (467)
T 2pnq_A          263 AKSVVKQDRLLGLLMPFRAFGDVKFKWS  290 (467)
T ss_dssp             HHHHBSSSSBTTTBSSSBCEECGGGTSC
T ss_pred             cceeEecCccccccccchhcCchhhccc
Confidence              45567899999999999999999964

PyMOL of 2pnq

>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}	Back alignment and structure

>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}	Back alignment and structure

>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}	Back alignment and structure

>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A	Back alignment and structure

>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A	Back alignment and structure

>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*	Back alignment and structure

>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}	Back alignment and structure

>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*	Back alignment and structure

>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}	Back alignment and structure

>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A	Back alignment and structure

>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}	Back alignment and structure

>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}	Back alignment and structure

>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}	Back alignment and structure

>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A	Back alignment and structure

>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}	Back alignment and structure

>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A	Back alignment and structure

>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A	Back alignment and structure

>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*	Back alignment and structure

>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}	Back alignment and structure

>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A	Back alignment and structure

>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		756
d1a6qa2		295	Protein serine/threonine phosphatase 2C, catalytic	99.92
d1txoa_		235	putative serine/threonine phosphatase pstp/ppp {My	99.17

>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1e-24  Score=220.45  Aligned_cols=111  Identities=30%  Similarity=0.377  Sum_probs=98.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccCCCceEEEEEEECCeEEEEEcCcceEEEEecCCCCCCCCCCCccccc
Q 004398          574 DAVLRAMAQALESTEEAYMEMVEKALDTNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPSFLKDDS  653 (756)
Q Consensus       574 ~~VlrAL~rAf~~TEeafLemadk~l~enpeLalmGSTaLVmLIkdedVYVANVGDSRAVLar~~~~~~~pn~~~~k~~~  653 (756)
                      +.+.+||.+||.++++.+..+.+    ..+....||||+++++|.++++||||||||||||++..               
T Consensus        94 ~~~~~al~~a~~~~~~~~~~~~~----~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~---------------  154 (295)
T d1a6qa2          94 ENVKNGIRTGFLEIDEHMRVMSE----KKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------  154 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH----HTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------------
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhh----hccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecc---------------
Confidence            35778999999999999876554    34566789999999999999999999999999999865               


Q ss_pred             cccccchhhhHhhhhhcccccCCccccchhhhcccccchhhhhccccceeecCCCCCCCcHHHHHHHHHcCCCCCCceec
Q 004398          654 RHKNRSRESLVRMELDRISEESPMHNQNCQVNMMNKNRDISICRLKMRAVQLSTDHSTSVEEEIIRIKAEHPDDSQAVFN  733 (756)
Q Consensus       654 g~r~~Sr~~~~~~eleri~eES~~~~~~~e~~~~n~~~e~~~~~~~l~AlQLT~DHSps~eEEr~RIkaehPDd~~~I~n  733 (756)
                                                                     .+.+||.||+|..+.|++||.+.|    +.|..
T Consensus       155 -----------------------------------------------~~~~lT~dH~~~~~~E~~Ri~~~g----g~v~~  183 (295)
T d1a6qa2         155 -----------------------------------------------KVHFFTQDHKPSNPLEKERIQNAG----GSVMI  183 (295)
T ss_dssp             -----------------------------------------------EEEEECCCCCTTSHHHHHHHHHTT----CCEET
T ss_pred             -----------------------------------------------cceeeccccCcccHHHHhhHhhcC----Ccccc
Confidence                                                           578999999999999999999999    66778


Q ss_pred             CcccCccccccccccCCcccc
Q 004398          734 DRVKGQLKVTRAFGAGFLKKV  754 (756)
Q Consensus       734 dRVkG~LaVTRAFGDg~LKqP  754 (756)
                      .|+.|.|.|||||||..||..
T Consensus       184 ~r~~g~l~~tRa~Gd~~~k~~  204 (295)
T d1a6qa2         184 QRVNGSLAVSRALGDFDYKCV  204 (295)
T ss_dssp             TEETTTBSCSBCEECGGGSCC
T ss_pred             cccCCceeeeeccCcHHhhhc
Confidence            899999999999999999864

PyMOL of d1a6qa2

>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure