Citrus Sinensis ID: 004411
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 755 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ZV48 | 862 | Probable alpha,alpha-treh | yes | no | 0.973 | 0.852 | 0.689 | 0.0 | |
| Q94AH8 | 860 | Alpha,alpha-trehalose-pho | no | no | 0.984 | 0.863 | 0.643 | 0.0 | |
| Q9LRA7 | 867 | Probable alpha,alpha-treh | no | no | 0.986 | 0.859 | 0.625 | 0.0 | |
| O80738 | 861 | Probable alpha,alpha-treh | no | no | 0.981 | 0.860 | 0.632 | 0.0 | |
| Q0WUI9 | 856 | Probable alpha,alpha-treh | no | no | 0.982 | 0.866 | 0.632 | 0.0 | |
| O23617 | 862 | Alpha,alpha-trehalose-pho | no | no | 0.985 | 0.863 | 0.616 | 0.0 | |
| Q9LMI0 | 851 | Probable alpha,alpha-treh | no | no | 0.977 | 0.867 | 0.599 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.830 | 0.855 | 0.367 | 1e-131 | |
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | no | no | 0.864 | 0.693 | 0.350 | 1e-113 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.863 | 0.793 | 0.356 | 1e-112 |
| >sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/747 (68%), Positives = 609/747 (81%), Gaps = 12/747 (1%)
Query: 6 DLLNLISFDDFGTL--NRIP-GVMKVPGVISEFENKSNDGTTTIVEPCQRRIIVANQLPV 62
D L+L+S DD+ + NRIP V K+ G+ E +G + +P +RI+V+NQLP+
Sbjct: 8 DQLSLVSADDYRIMGRNRIPNAVTKLSGL----ETDDPNGGAWVTKP--KRIVVSNQLPL 61
Query: 63 KAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKF 122
+A+ + SNKW FE+D DSLYLQLKDGFP ETEV+YVGSLN ++ +QE+VS LLEKF
Sbjct: 62 RAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLEKF 121
Query: 123 KCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADK 182
+CVPTFLP+D+ KYYHGFCKHYLWP+FHY+LP+T + G+ FDR W+AY + NK+FADK
Sbjct: 122 QCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRAYTTVNKIFADK 181
Query: 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK 242
+ EV+NPD+DYVWIHDYHLM+LP+FLR RFHR+K+G FLHSPFPSSEIYRTLPVRDEILK
Sbjct: 182 IFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEILK 241
Query: 243 SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQ 302
LN DL+GFHTFDYARHFLS CSRMLGL+YESKRGYIGL+YFGRTVSIKILPVGIHMGQ
Sbjct: 242 GFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQ 301
Query: 303 FESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKV 362
ESI + + T +KVK L+E+F G IV+LGVDD+D+FKGISLKF AMGQLLEQ+ +LRGKV
Sbjct: 302 IESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRGKV 361
Query: 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP-GYEPIVIIKEPLSTQDKVPYYA 421
VLVQITNPARSSGKDVQD+ N IA+EIN FG+P GY+PIV I P+ST DKV YYA
Sbjct: 362 VLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFINGPVSTLDKVAYYA 421
Query: 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481
I+EC VVN VRDGMNLVPYKYTV+RQGSP LD ALG E + +KSVIIVSEFIGCSPS
Sbjct: 422 ISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDD--VRKSVIIVSEFIGCSPS 479
Query: 482 LSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541
LSGAIRVNPWN+DAV +AM SA+ M ++EK LRH+KH+KYISSH+VAYWA+S DQDL+RA
Sbjct: 480 LSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWARSYDQDLQRA 539
Query: 542 CRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS 601
C+DH KR WGVG GL F++VAL P FR+L I AY +++SRLILLDYDGT+M Q +
Sbjct: 540 CKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILLDYDGTMMDQDT 599
Query: 602 EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKN 661
DKRPS +++S+LN LC+DP N VFIVSGRGKD L WF LG+SAEHGYFTRW+ N
Sbjct: 600 LDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWNSN 659
Query: 662 SAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKEL 721
S WE L D WK+IA+PVM Y E TDGSFIE+KE+A+VWHHQ AD FGS QAKEL
Sbjct: 660 SPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEADHSFGSWQAKEL 719
Query: 722 LDHLENVLANEPVVVKRGQHIVEVKPQ 748
LDHLE+VL NEPVVVKRGQHIVEVKPQ
Sbjct: 720 LDHLESVLTNEPVVVKRGQHIVEVKPQ 746
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/766 (64%), Positives = 595/766 (77%), Gaps = 23/766 (3%)
Query: 2 RSSLDLLNLISFDD--FGTLNR-IPGVMKVPGVISEFENKSNDGTTTIVEPCQRRIIVAN 58
RS +LL L S D FG +NR IP +M V G++S +N S D T + P R IIVAN
Sbjct: 4 RSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDNDSKD---TDLSPKDRIIIVAN 60
Query: 59 QLPVKAYYEKDSNK-------------WGFEYDQDSLYLQLKDGFPLET-EVIYVGSLNV 104
+LP++A D N W F +D++SL LQLKDG E EVIYVG L
Sbjct: 61 ELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIYVGCLKE 120
Query: 105 EIGVDDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARF 164
EI +++QEEV ILLE FKCVPTFLP D++ +YYHGFCK LWPLFHYMLPL+ G RF
Sbjct: 121 EIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSPDLGGRF 180
Query: 165 DRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSP 224
DR WQAY+S NK+FAD++MEVINP++D+VWIHDYHLMVLP+FLRKRF+RVK+GFFLHSP
Sbjct: 181 DRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSP 240
Query: 225 FPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDY 284
FPSSEIY+TLP+R+E+L++LLNSDLIGFHTFDYARHFLS CSRMLGL YESKRGYIGL+Y
Sbjct: 241 FPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEY 300
Query: 285 FGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFKGIS 342
+GRTVSIKILPVGIHMGQ +S++SL T +KV EL E++ G+ ++LGVDDMD+FKGI+
Sbjct: 301 YGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMDIFKGIT 360
Query: 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402
LK LAM QLL QHP+ +GKVVLVQI NPAR GKDV+++ ++T + IN FG+PGY+
Sbjct: 361 LKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETFGRPGYD 420
Query: 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKN 462
PIV+I PL ++V YY +AECC+V VRDGMNL+PY+Y VSRQG+ LD+ L + E N
Sbjct: 421 PIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKILKL-EAN 479
Query: 463 PPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI 522
KKS+++VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSAL++ EK LRHEKHYKY+
Sbjct: 480 NRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEKHYKYV 539
Query: 523 SSHDVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNK 582
S+HDV YWA+S QDLER+C +H +RCWG+G GL FR+VAL FRKL M HI SAY +
Sbjct: 540 STHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIVSAYKR 599
Query: 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642
T +R ILLDYD T+MPQ S DKRPS++ + ILN LC D N VFIVS + +++L +WFS
Sbjct: 600 TKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLSDWFSP 659
Query: 643 VEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAI 702
EKLG++AEHGYF R K WE C D WK+IAEPVM+LYTETTDGS IEDKETA+
Sbjct: 660 CEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIEDKETAL 719
Query: 703 VWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
VW ++ ADP FGSCQAKELLDHLE+VLANEPV VKRGQ+ VEVKPQ
Sbjct: 720 VWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQ 765
|
Regulates plant architecture, shape of epidermal pavement cells and branching of trichomes. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1012 bits (2617), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/753 (62%), Positives = 594/753 (78%), Gaps = 8/753 (1%)
Query: 2 RSSLDLLNLISFD--DFGTLNR-IPGVMKVPGVISEFENKSNDGTTTIVEPC---QRRII 55
RS + L+L S+D DF R +P VM VPG+ISE + +DG++ + +R+II
Sbjct: 4 RSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYSDGSSDVNSSNSSRERKII 63
Query: 56 VANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVS 115
VAN LP++A + ++ +W F +D+DSL LQL+DGF +TE +Y+GSLN +IG+ +QEEVS
Sbjct: 64 VANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISEQEEVS 123
Query: 116 TILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSA 175
LL F CVPTFLP ++ +K+Y GFCKH+LWPLFHYMLP+ HG RFDR WQAY+SA
Sbjct: 124 HKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQAYVSA 183
Query: 176 NKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP 235
NK+F+D+VMEVINP+EDYVWIHDYHLMVLP+FLRKRF+R+K+GFFLHSPFPSSEIYRTLP
Sbjct: 184 NKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP 243
Query: 236 VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP 295
VRD++L+ LLN DLIGFHTFDYARHFLS CSRMLGL+YESKRG+IGLDYFGRTV IKILP
Sbjct: 244 VRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILP 303
Query: 296 VGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355
VGIHMG+ ES+++L T K+KE++E+F GK +ILGVDDMD+FKGISLK +AM +L E +
Sbjct: 304 VGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMERLFETY 363
Query: 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415
+RGK+VL+QI NPAR++GKDV++ +T A+ IN +G GY+P+++I + +
Sbjct: 364 WHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLVPRYE 423
Query: 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475
K YYA+A+CC+VN VRDGMNLVPYKY + RQG+P +D+A+G+ + + S+++VSEF
Sbjct: 424 KTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDS--ARTSMLVVSEF 481
Query: 476 IGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535
IGCSPSLSGAIRVNPW+VDAVA+A++ AL M EK LRHEKHY Y+S+HDV YWAKS
Sbjct: 482 IGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSFM 541
Query: 536 QDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGT 595
QDLERACR+H KRCWG+G GL FR+++L P FRKL + HI S Y T R I LDYDGT
Sbjct: 542 QDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYDGT 601
Query: 596 VMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655
++P++S K P+ EVLS+L LC DPKN VF+VSGRG +SL +W S E LG++AEHGYF
Sbjct: 602 LVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHGYF 661
Query: 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGS 715
RWS WE C + + +WK + EPVM+ Y + TDGS IE KE+A+VWHHQ ADP FG+
Sbjct: 662 IRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDFGA 721
Query: 716 CQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
CQAKELLDHLE+VLANEPVVVKRGQHIVEVKPQ
Sbjct: 722 CQAKELLDHLESVLANEPVVVKRGQHIVEVKPQ 754
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O80738|TPS10_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/749 (63%), Positives = 581/749 (77%), Gaps = 8/749 (1%)
Query: 6 DLLNLISFDDFG---TLNRIPGVMKVPGVISEFENKS-NDGTTTIVE-PC-QRRIIVANQ 59
+LL+L S D T +P VM VPG+IS+ + +DG + ++ PC +R+IIVAN
Sbjct: 8 NLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCRERKIIVANF 67
Query: 60 LPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILL 119
LP+ + ++ KW F D DS L LKDGF ETEVIYVGSL + V +Q+EVS L
Sbjct: 68 LPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQDEVSHNLF 127
Query: 120 EKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVF 179
E+F CV TFLP DVHKK+Y GFCK LWPLFHYMLP+ HG RFDRG WQAY+SANK+F
Sbjct: 128 EEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQAYVSANKIF 187
Query: 180 ADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDE 239
ADKVM VIN +EDY+WIHDYHLMVLP+FLR+RFHRVK+GFFLHSPFPSSEIYRTLPVR+E
Sbjct: 188 ADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVREE 247
Query: 240 ILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIH 299
+L+ LLN DLIGFHTFDYARHFLS C RMLGL YESKRG+I LDY GRTV +KILP+GIH
Sbjct: 248 LLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLKILPIGIH 307
Query: 300 MGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR 359
MG+ ES+++L T +K+KE++EK+ GK +ILGVDDMD+FKG+SLK LA LL+Q+P +
Sbjct: 308 MGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHLLQQYPSML 367
Query: 360 GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419
GK+VL+QI NPAR SGKDVQ+ +T + IN +G YEP+V+I P+ +K Y
Sbjct: 368 GKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVPRFEKSAY 427
Query: 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479
YA+AECC+VN VRDGMNLVPYKYTV RQG+P ++++LGV + P + S +++SEFIGCS
Sbjct: 428 YALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLP--RTSTLVLSEFIGCS 485
Query: 480 PSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539
PSLSGAIRVNPW+VDAVAD++ SA+ M + EK LRH+KH+ YIS+HDV YWA+S QDLE
Sbjct: 486 PSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSFSQDLE 545
Query: 540 RACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQ 599
RA RDH KRCWGVG GLGFR+VAL P FR+L + SAY +++ R I LDYDGT++P+
Sbjct: 546 RASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYDGTLVPE 605
Query: 600 TSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWS 659
TS K PS EV+S L LC+DP N +FIVSGRGK SL W + E LG++AEHGYFTRW+
Sbjct: 606 TSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGYFTRWN 665
Query: 660 KNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAK 719
K+S WE L+ D +WK++ EP+M+LYTETTDGS IE KE+A+VWHHQ ADP FGSCQAK
Sbjct: 666 KSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFGSCQAK 725
Query: 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
ELLDHLE VL NEPV+V RG IVEVKPQ
Sbjct: 726 ELLDHLETVLVNEPVIVNRGHQIVEVKPQ 754
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q0WUI9|TPS8_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/751 (63%), Positives = 583/751 (77%), Gaps = 9/751 (1%)
Query: 2 RSSLDLLNLISFD--DFGTLNR-IPGVMKVPGVISEFE-NKSNDGTTTIVEPCQRRIIVA 57
RS + L+L S+D DF R +P VM VPG+I++ + + +++ T+T +R+IIVA
Sbjct: 4 RSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTSTSGGSRERKIIVA 63
Query: 58 NQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTI 117
N LP+++ + ++ KW F +D+DSL LQL+DGF ETE +YVGSLNV+I ++QEEVS
Sbjct: 64 NMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQEEVSQK 123
Query: 118 LLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANK 177
LLE+F CV TFL ++ + +Y GFCKH LWPLFHYMLP+ HG RFDR WQAY+SANK
Sbjct: 124 LLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQAYVSANK 183
Query: 178 VFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR 237
+F+D+VMEVINP++DYVWI DYHLMVLP+FLRKRF+R+K+GFFLHSPFPSSEIYRTLPVR
Sbjct: 184 IFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVR 243
Query: 238 DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVG 297
DEIL+ LLN DLIGFHTFDYARHFLS CSRMLGL+YESKRG+IGLDYFGRTV IKILPVG
Sbjct: 244 DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVG 303
Query: 298 IHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPD 357
+HMG+ ES++SLD T K KE++E+F GK ++LG+DDMD+FKGISLK +AM L E +
Sbjct: 304 VHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHLFETYWH 363
Query: 358 LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417
L+GKVVLVQI NPARSSGKDV++ +T A IN +G Y+PIV+I + +K
Sbjct: 364 LKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLVPRSEKT 423
Query: 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477
YYA A+CC+VN VRDGMNLVPYKY V RQG+ V + +P + S ++VSEFIG
Sbjct: 424 AYYAAADCCLVNAVRDGMNLVPYKYIVCRQGT---RSNKAVVDSSP--RTSTLVVSEFIG 478
Query: 478 CSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537
CSPSLSGAIRVNPW+VDAVA+A++SAL+M EK LRHEKHY YIS+HDV YWAKS QD
Sbjct: 479 CSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSFMQD 538
Query: 538 LERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVM 597
LERACRDH KRCWG+G GLGFR+++L P FRKL + HI Y KT R I LDYDGT++
Sbjct: 539 LERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDGTLV 598
Query: 598 PQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTR 657
P++S + PS EV+S+L LC DP N VFIVSGRG++SL NW S E LG++AEHGYF R
Sbjct: 599 PESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGYFIR 658
Query: 658 WSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQ 717
W WE C D +W+ + EPVM+ Y E TDG+ IE KE+A+VWHHQ ADP FGSCQ
Sbjct: 659 WKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFGSCQ 718
Query: 718 AKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
AKE+LDHLE+VLANEPVVVKRGQHIVEVKPQ
Sbjct: 719 AKEMLDHLESVLANEPVVVKRGQHIVEVKPQ 749
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/754 (61%), Positives = 580/754 (76%), Gaps = 10/754 (1%)
Query: 2 RSSLDLLNLIS--FDDFG-TLNRIPGVMKVPGVISEFENKSNDGTTTIVEPCQ----RRI 54
RS +LL+L S F F R P V V GV+SE ++ +N + P R I
Sbjct: 4 RSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVTQDRII 63
Query: 55 IVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEV 114
IV NQLP+K++ + K F +D DSL LQLKDG + EV+Y+G L +I +Q++V
Sbjct: 64 IVGNQLPIKSH-RNSAGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVEQDDV 122
Query: 115 STILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLS 174
S LLE FKCVP ++P ++ KYYHGFCK +LWPLFHYMLPLT G RFDR WQAYLS
Sbjct: 123 SQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQAYLS 182
Query: 175 ANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTL 234
NK+FADKVMEVI+PD+D+VW+HDYHLMVLP+FLRKRF+RVK+GFFLHSPFPSSEIYRTL
Sbjct: 183 VNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL 242
Query: 235 PVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKIL 294
PVR+E+L++LLN+DLIGFHTFDYARHFLS CSRMLGL+Y+SKRG IGL+Y+GRTVSIKIL
Sbjct: 243 PVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVSIKIL 302
Query: 295 PVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQ 354
PVGIH+ Q +SI++L T KV EL+++F + V+LGVDDMD+FKGISLK LAM QLL Q
Sbjct: 303 PVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQLLTQ 362
Query: 355 HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414
HP+ RG+VVLVQI NPAR GKDVQ++ S+T + IN FG+PGY+P+V+I PL
Sbjct: 363 HPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTPLQFF 422
Query: 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE 474
+++ YY IAECC+V VRDGMNL+PY+Y + RQG+P L+ +G+D KKS+++VSE
Sbjct: 423 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPS--AAKKSMLVVSE 480
Query: 475 FIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSI 534
FIGCSPSLSGAIRVNPWN+DAV +AMD AL + EK +RHEKH+KY+S+HDVAYWA+S
Sbjct: 481 FIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWARSF 540
Query: 535 DQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDG 594
QDLERAC DH+ KRCWG+G GLGFR+VAL P F+KL + HI SAY +T +R ILLDYDG
Sbjct: 541 IQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDYDG 600
Query: 595 TVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGY 654
T++ S P+ E + ILN+L +DPKN V++VSG+ + +L WFS + LGL AEHGY
Sbjct: 601 TMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEHGY 660
Query: 655 FTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFG 714
F R + + WE SL F+WK+IAEPVM+LYTETTDGS IE KETA+VW++Q ADP FG
Sbjct: 661 FIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDFG 720
Query: 715 SCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
SCQAKEL++HLE+VL N+PV VK GQ +VEVKPQ
Sbjct: 721 SCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQ 754
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/754 (59%), Positives = 569/754 (75%), Gaps = 16/754 (2%)
Query: 2 RSSLDLLNLISFDDFGTLNR----IPGVMKVPGVISEFENKS---NDGTTTIVEPCQRRI 54
RS +LL+L S +F + R +P VM VPG +SEF+ R I
Sbjct: 4 RSYTNLLDLAS-GNFPVMGRERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSSDRMI 62
Query: 55 IVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEV 114
IVAN+LP+KA EK + W F +DQDSLYLQLKDG P + E++YVGSL+V++ ++Q++V
Sbjct: 63 IVANRLPLKA--EKRNGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQDDV 120
Query: 115 STILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLS 174
+ ILL+KFKCVPTF P D+ K+Y GFCK +WPLFHYMLP +A HG RFDR W+AY++
Sbjct: 121 AQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEAYVA 180
Query: 175 ANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTL 234
NK+F KV+EVINPD+D+VWIHDYHLMVLP+FLR+RF+R+++GFFLHSPFPSSEIYR+L
Sbjct: 181 TNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIYRSL 240
Query: 235 PVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKIL 294
PVR+EILK+LLNSDLIGFHTFDYARHFL+ CSRMLGL Y+SKRGYIGL+Y+GRTV IKI+
Sbjct: 241 PVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIM 300
Query: 295 PVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQ 354
PVGI+MG+ +S+M KV EL+ +F+GK V+LG+DDMD+FKGI+LK LAM Q+L Q
Sbjct: 301 PVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQMLRQ 360
Query: 355 HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414
HP+ RG+ VLVQI NPAR G DV+++ + IN FGKPGY+PI+ I P+S
Sbjct: 361 HPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPVSIN 420
Query: 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE 474
+ YY IAEC VV VRDGMNL PY+Y V RQG LG + KKS+++ SE
Sbjct: 421 EINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQG------LLGSESDFSGPKKSMLVASE 474
Query: 475 FIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSI 534
FIGCSPSLSGAIRVNPWNV+A +A++ AL M + EK LRHEKH++Y+S+HDVAYW++S
Sbjct: 475 FIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSRSF 534
Query: 535 DQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDG 594
QDLER C DH KRCWG+G+ GFR+VAL P FRKL + I S Y + SR ILLDYDG
Sbjct: 535 LQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDYDG 594
Query: 595 TVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGY 654
T+MPQ S +K PS EVL+ L+ LC D KN++FIVSGRG++SL WF+ +K+G++AEHGY
Sbjct: 595 TLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEHGY 654
Query: 655 FTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFG 714
F +WS + WE C + DF W +I EPVMK YTE+TDGS IE KE+A+VW ++ ADP FG
Sbjct: 655 FLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPGFG 714
Query: 715 SCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
S QAKE+L+HLE+VLANEPV VK G +IVEVKPQ
Sbjct: 715 SLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQ 748
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 468 bits (1204), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/680 (36%), Positives = 392/680 (57%), Gaps = 53/680 (7%)
Query: 52 RRIIVANQLPVKAYYEKDSN-KWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDD 110
R I+V+N+LPV +K+SN KW + L L L++ I+VG + EI DD
Sbjct: 17 RLIVVSNRLPVSI--KKESNGKWSCKMSSGGLVAALSG---LKSNFIWVGWIGAEIEEDD 71
Query: 111 QEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQ 170
++E+ +L + + C+P FL V ++Y+GF LWPLFHY LP + R W
Sbjct: 72 RKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLDYDDRI----WN 126
Query: 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEI 230
+Y+ AN+ F+ V E++ P+ D VW+HDYH+M+LP L+++ ++GFFLH PFPSSEI
Sbjct: 127 SYVEANEQFSSVVAEILKPN-DLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEI 185
Query: 231 YRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290
+R LP R EIL +LN LIGFHT+DYARHFL SC+R++GL G+ + R V
Sbjct: 186 FRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKDRFVQ 241
Query: 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350
+ + PVGI +F + ++KELKE F+G V++G+D +D KGI K A+ +
Sbjct: 242 VGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIER 301
Query: 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410
L +++P+ +GK+VL+Q+ P+R ++ Q L + + IN +G GY PI + +
Sbjct: 302 LFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQS 361
Query: 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470
+ + Y I++ ++ +RDGMNLV +Y V + + V+
Sbjct: 362 VDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQT-----------------ENNGVL 404
Query: 471 IVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530
I+SEF G + SLSGA+ +NPWN + VAD++ ++L M +E+ +H+ KY++ H ++W
Sbjct: 405 ILSEFTGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHW 464
Query: 531 AKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILL 590
++L +A + ++V + +KL + + Y ++ RL++
Sbjct: 465 GLGFVKELNKASSN-------------TDKMVTI----QKLDIEKVVDIYKQSKRRLLIF 507
Query: 591 DYDGTVMP--QTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648
YDGT++P + RPS E+L+ + L NDPK V+I+SGR K +L WF G++ +GL
Sbjct: 508 AYDGTLIPYNNVPQLSRPSQELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQ-IGL 566
Query: 649 SAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQH 708
SAE+G F + +++ WE + D WKE P+ K +T T GSF E+KE WH+++
Sbjct: 567 SAEYGCFFKLPESTEWEQQVPSMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRN 626
Query: 709 ADPHFGSCQAKELLDHLENV 728
ADP FGS QA+EL HL+N+
Sbjct: 627 ADPIFGSIQARELHLHLDNL 646
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 250/713 (35%), Positives = 381/713 (53%), Gaps = 60/713 (8%)
Query: 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNV--EIGV 108
QR ++VAN+LPV A + + W E L L E I +NV E+G
Sbjct: 92 QRLLVVANRLPVSAV-RRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVG- 149
Query: 109 DDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYM-LPLTASHGA-RFDR 166
Q+ +S L EK +C+P FL ++ +YY+G+C + LWPLFHY+ LP R +
Sbjct: 150 --QKALSKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ 206
Query: 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP 226
++ AY AN++FAD V E + D VW HDYHLM LP L++ ++KVG+FLH+PFP
Sbjct: 207 SQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFP 265
Query: 227 SSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFG 286
SSEI+RTLP R E+L+S+L +DL+GFHT+DYARHF+S+C+R+LGL + G++ G
Sbjct: 266 SSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQG 321
Query: 287 RTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFL 346
R + P+GI +F + + Q +KELKE+F G+ V+LGVD +D+ KGI K L
Sbjct: 322 RLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAGRKVMLGVDRLDMIKGIPQKIL 381
Query: 347 AMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406
A + LE++ + R KVVL+QI P R+ + Q L S + I IN FG PI
Sbjct: 382 AFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHH 441
Query: 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQK 466
+ L YA+ + +V +RDGMNLV Y++ ++ K
Sbjct: 442 LDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEA-----------------K 484
Query: 467 KSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525
K V+I+SEF G + SL +GAI VNPWN+ VA ++ AL M +E+ RH ++ ++ +H
Sbjct: 485 KGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHHVKTH 544
Query: 526 DVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNS 585
WA++ +L + RI + PE L H Y+K+N+
Sbjct: 545 TAQEWAETFVSELNDTV------------IEAQLRISKVPPE---LPQHDAIQRYSKSNN 589
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSI-----------LNDLCNDPKNAVFIVSGRGKD 634
RL++L ++ T+ R ++ + L LC+DP + ++SG +
Sbjct: 590 RLLILGFNATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRS 649
Query: 635 SLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSF 694
L F G + L+AE+G F R + + +W + + V K +TE T S
Sbjct: 650 VLDKNF-GEYDMWLAAENGMFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSH 708
Query: 695 IEDKETAIVWHHQHADPHFGSCQAKELLDHL-ENVLANEPVVVKRGQHIVEVK 746
E ++T+++W++++AD FG QA++LL HL ++N V V +G VEV+
Sbjct: 709 FETRDTSLIWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVR 761
|
Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 251/704 (35%), Positives = 383/704 (54%), Gaps = 52/704 (7%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQ 111
R ++VAN+LPV A N W E L L G + + +VG V++ + +
Sbjct: 13 RLLVVANRLPVSAK-RTGENSWSLEMSPGGLVSGLL-GITSQFDTKWVGWPGVDVHDEIE 70
Query: 112 EEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYM-LPLTASHGARFD-RGEW 169
+ T L + KC+P FL V +YY+G+C LWP+ H+M LP H ++
Sbjct: 71 KNALTESLAEMKCIPVFLNG-VFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQTFETQY 129
Query: 170 QAYLSANKVFADKVMEVINPDE-DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS 228
AY AN++F D +++ N +E D VW HDYHLM LP +L++ +++KVG+FLHSPFPSS
Sbjct: 130 DAYKKANRMFLDVIID--NYEEGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSS 187
Query: 229 EIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT 288
E+Y+TLP R E+L+++L +DL+GFHT+D+ARHFLS+C+R+LG+ + + G+ Y GR
Sbjct: 188 EVYKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGV----EGTHEGVVYQGRV 243
Query: 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAM 348
+ + P+GI +F L Q++ EL+EKF GK VILGVD +D+ KGI K+LA
Sbjct: 244 TRVAVFPIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQKYLAF 303
Query: 349 GQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIK 408
+ LE++P R KVVLVQI P R+ + + L S + + IN FG PI +
Sbjct: 304 EKFLEENPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHLD 363
Query: 409 EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKS 468
+ YAIA+ +V +RDGMNLV Y++ ++ KK
Sbjct: 364 CSVDFNYLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEA-----------------KKG 406
Query: 469 VIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527
V+++SEF G SL GA+ VNPW+V V+ A+ AL M +E+ RH +++Y+ +H
Sbjct: 407 VLVLSEFAGAGQSLGVGALIVNPWDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSA 466
Query: 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRL 587
W +L + + R + L +L + Y+++N+RL
Sbjct: 467 EKWGLDFMSELNGIIPESEMQ----------MRKIPL-----QLPEQDVIQQYSQSNNRL 511
Query: 588 ILLDYDGTVM-PQTSEDK----RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642
I+L + GT+ P S K + + E+ L LCNDPK V ++S GK+ L F G
Sbjct: 512 IILGFFGTLAEPMNSGTKEMDLKLNPELKGTLKALCNDPKTTVVVLSRSGKNILNKNF-G 570
Query: 643 VEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAI 702
+ L+AE+G F + + + DW + + V K +T+ T S+ E ET++
Sbjct: 571 ESNIWLAAENGMFEKQTTGEWVTNMPQNVNLDWVDGVKNVFKYFTDRTPRSYFEASETSL 630
Query: 703 VWHHQHADPHFGSCQAKELLDHL-ENVLANEPVVVKRGQHIVEV 745
VW++++AD FG QA++LL +L ++N V V RG H VEV
Sbjct: 631 VWNYEYADVEFGRAQARDLLQYLWAGPISNASVDVVRGNHSVEV 674
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 755 | ||||||
| 444300782 | 862 | trehalose-6-phosphate synthase [Camellia | 0.984 | 0.861 | 0.700 | 0.0 | |
| 356562495 | 855 | PREDICTED: probable alpha,alpha-trehalos | 0.984 | 0.869 | 0.708 | 0.0 | |
| 297832542 | 871 | predicted protein [Arabidopsis lyrata su | 0.978 | 0.848 | 0.690 | 0.0 | |
| 15224213 | 862 | putative alpha,alpha-trehalose-phosphate | 0.973 | 0.852 | 0.689 | 0.0 | |
| 60265771 | 868 | trehalose-6-phosphate synthase [Ginkgo b | 0.986 | 0.858 | 0.667 | 0.0 | |
| 225424707 | 860 | PREDICTED: probable alpha,alpha-trehalos | 0.984 | 0.863 | 0.665 | 0.0 | |
| 147861933 | 857 | hypothetical protein VITISV_024248 [Viti | 0.984 | 0.866 | 0.665 | 0.0 | |
| 255584928 | 803 | trehalose-6-phosphate synthase, putative | 0.921 | 0.866 | 0.704 | 0.0 | |
| 255560009 | 861 | trehalose-6-phosphate synthase, putative | 0.986 | 0.865 | 0.664 | 0.0 | |
| 225457083 | 862 | PREDICTED: probable alpha,alpha-trehalos | 0.978 | 0.857 | 0.668 | 0.0 |
| >gi|444300782|gb|AGD98700.1| trehalose-6-phosphate synthase [Camellia sinensis] | Back alignment and taxonomy information |
|---|
Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/757 (70%), Positives = 628/757 (82%), Gaps = 14/757 (1%)
Query: 2 RSSLDLLNLISFDDFGTLNR--IPGVMKVPGVISEFENKSNDGTTTIVEPC--------Q 51
RS +LLNL +D+ ++R IP VM VPG+IS +N + T + +
Sbjct: 4 RSCFNLLNL---EDYSRVDRTRIPRVMTVPGIISCLDNNGGEETEPDNDDDDVVSSVNQE 60
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQ 111
RRIIV+NQLP+KA+ + ++ KW F++D+D+L LQLKDGFP + EVIY+G L VEI V DQ
Sbjct: 61 RRIIVSNQLPLKAHRDSETKKWCFDWDKDALALQLKDGFPQDIEVIYIGCLKVEIEVSDQ 120
Query: 112 EEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQA 171
+EVS L EKF+CVPTFLP+++ K+YHGFCKHYLW LFHYMLP+T +HG RFD+ W+A
Sbjct: 121 DEVSQFLFEKFRCVPTFLPSEIQNKFYHGFCKHYLWNLFHYMLPVTPNHGVRFDQSLWRA 180
Query: 172 YLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIY 231
Y+SANKVFAD +MEVINPDEDYVWIHDYHLMVLP+FLRKRFHR+K+GFFLHSPFPSSEIY
Sbjct: 181 YVSANKVFADTIMEVINPDEDYVWIHDYHLMVLPTFLRKRFHRIKLGFFLHSPFPSSEIY 240
Query: 232 RTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291
RTLPVRDEIL++LLN DLIGFHTFDYARHFLS CSRMLGL+Y SKRGY+GL+Y+GRTVSI
Sbjct: 241 RTLPVRDEILRALLNCDLIGFHTFDYARHFLSCCSRMLGLDYHSKRGYVGLEYYGRTVSI 300
Query: 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351
KILP GIHMGQ ESI S T +KV+ELKE+F+GKIV+LGVDDMD+FKGISLKFLAMG L
Sbjct: 301 KILPAGIHMGQLESIKSFPDTSKKVRELKERFEGKIVLLGVDDMDMFKGISLKFLAMGHL 360
Query: 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411
LE+HP++RGKVVLVQI NPARS GKD+Q++ ++ + + ++N +GKPGY+PIV I P+
Sbjct: 361 LEEHPEMRGKVVLVQIVNPARSRGKDIQEVQNEISSVLSQVNDKYGKPGYDPIVFINGPV 420
Query: 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471
STQDKV Y+AI+ECCVVN VRDGMNLVPYKYTV RQ +P LD+ALG++ P +KS+II
Sbjct: 421 STQDKVAYFAISECCVVNAVRDGMNLVPYKYTVCRQSNPDLDKALGLEGSETP-RKSMII 479
Query: 472 VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531
VSEFIGCSPSLSGAIRVNPWN+D+V++ M+ A+ M EK +RHEKHYKYISSHD+AYWA
Sbjct: 480 VSEFIGCSPSLSGAIRVNPWNIDSVSEGMNLAITMPEAEKQMRHEKHYKYISSHDIAYWA 539
Query: 532 KSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLD 591
+S DQDLERACR+H KRCWG+G GLGFR+VALGP F+KL + HI AYN TNSRLILLD
Sbjct: 540 RSFDQDLERACREHYRKRCWGIGFGLGFRVVALGPNFKKLAVEHIVPAYNGTNSRLILLD 599
Query: 592 YDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAE 651
YDGT+MPQ S DK PS +V+ +LN LC DP N VFIVSGRGKDSL WFS EKLGLSAE
Sbjct: 600 YDGTMMPQGSADKSPSDDVIKVLNGLCADPNNIVFIVSGRGKDSLSKWFSPCEKLGLSAE 659
Query: 652 HGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADP 711
HG+FTRW+K+S WE C L +FDWK IA PVM+ YTE TDGSFIE KE+A+VWHHQ ADP
Sbjct: 660 HGFFTRWNKDSPWESCMLAMNFDWKTIALPVMEHYTEATDGSFIEQKESALVWHHQEADP 719
Query: 712 HFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
FGS QAKELLDHLE+VLANEPVVVKRGQHIVEVKPQ
Sbjct: 720 DFGSWQAKELLDHLESVLANEPVVVKRGQHIVEVKPQ 756
|
Source: Camellia sinensis Species: Camellia sinensis Genus: Camellia Family: Theaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356562495|ref|XP_003549506.1| PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/756 (70%), Positives = 629/756 (83%), Gaps = 13/756 (1%)
Query: 2 RSSLDLLNLISFDDFGTL-NRIPGVMKVP-GVISEFE--NKSNDGTTTIVEPC--QRRII 55
RS L LLNL+S DD+ L +R P ++ G + E + N G+ V P +RRI+
Sbjct: 4 RSCLGLLNLVSVDDYHALASRAPRLVNTAAGDLPELDIDGMENSGSDDAVAPAPLERRIV 63
Query: 56 VANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVS 115
VANQLP++A+ ++ KW FE+D+DSL LQLKDGFP + EV+YVGSL EI QEEV+
Sbjct: 64 VANQLPIRAF--REGKKWRFEWDRDSLVLQLKDGFPSDVEVLYVGSLKAEIEPCKQEEVA 121
Query: 116 TILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSA 175
+LLEKF+CVPTF+P++VH K+YHGFCKHYLWPLFHYMLP++ S GARFDR +W+AY+ A
Sbjct: 122 QLLLEKFRCVPTFIPSEVHNKFYHGFCKHYLWPLFHYMLPMSPSQGARFDREQWKAYVLA 181
Query: 176 NKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP 235
N++FADKV EVINPDEDYVWIHDYHLM+LP+FLRKRFHRVK+GFFLH+ FPSSEIYRTLP
Sbjct: 182 NRIFADKVTEVINPDEDYVWIHDYHLMILPTFLRKRFHRVKLGFFLHNTFPSSEIYRTLP 241
Query: 236 VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP 295
VR++IL++ LN DLIGFHTFDYARHFLS CSRMLGL+YESKRGYIGLDY+GRTV++KILP
Sbjct: 242 VREDILRAFLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTVKILP 301
Query: 296 VGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355
GIHMG ES++SL T +VKELKE+++GKIVILGVDDMDLFKGISLKFLA+G+LLE
Sbjct: 302 AGIHMGLLESVLSLPQTALRVKELKEEYEGKIVILGVDDMDLFKGISLKFLALGKLLEVD 361
Query: 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415
LRG+VVLVQI N ARS GKD+QD+ +++ IA EIN + +PGY+PIV I P+STQ+
Sbjct: 362 ESLRGRVVLVQILNAARSKGKDIQDVKNESEAIAREINEKYSQPGYQPIVYINGPISTQE 421
Query: 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGV---DEKNPPQKKSVIIV 472
K YYA++ECCVVN VRDGMNLVPY+YTV RQGS LD+ALGV D+K P K+SVIIV
Sbjct: 422 KAAYYAVSECCVVNAVRDGMNLVPYEYTVCRQGSVALDKALGVEGEDKKAP--KQSVIIV 479
Query: 473 SEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAK 532
SEFIGCSPSLSGAIRVNPWN+D VA+AM+SA+ M EK LRHEKHYKYISSHDVAYWA+
Sbjct: 480 SEFIGCSPSLSGAIRVNPWNIDDVAEAMNSAVTMSEAEKHLRHEKHYKYISSHDVAYWAR 539
Query: 533 SIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDY 592
S DQDL+RACR+H KR WGVGLGLGFRIVAL P FRKL + HIASAY T+SRLILLDY
Sbjct: 540 SFDQDLDRACREHYSKRYWGVGLGLGFRIVALDPTFRKLSVDHIASAYRDTHSRLILLDY 599
Query: 593 DGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEH 652
DGT+MPQ + +K PS EV+++LN LC+DP+N VFIVSGR KD LG WFS EKLGLSAEH
Sbjct: 600 DGTMMPQATINKTPSREVIAVLNYLCSDPENMVFIVSGRDKDCLGKWFSPCEKLGLSAEH 659
Query: 653 GYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPH 712
GYFTRWSK+S WE C L DF+WK IAEPVM LYTE TDGSFIE KE+A+VWHHQ ADP+
Sbjct: 660 GYFTRWSKDSPWETCGLATDFEWKMIAEPVMSLYTEATDGSFIEHKESAMVWHHQEADPY 719
Query: 713 FGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
FGSCQAKELLDHLE+VLANEPVVV RGQHIVEVKPQ
Sbjct: 720 FGSCQAKELLDHLESVLANEPVVVIRGQHIVEVKPQ 755
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|297832542|ref|XP_002884153.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297329993|gb|EFH60412.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1078 bits (2788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/749 (69%), Positives = 613/749 (81%), Gaps = 10/749 (1%)
Query: 6 DLLNLISFDDFGTL--NRIP-GVMKVPGVISEFENKSND--GTTTIVEPCQRRIIVANQL 60
D L+L+S DD+ + NRIP V K+ G+ ++ + SND G + +P +RI+V+NQL
Sbjct: 8 DQLSLVSADDYRIMGRNRIPNAVTKLSGLETDDGDGSNDPNGGAWVTKP--KRIVVSNQL 65
Query: 61 PVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLE 120
P++A+ + SNKW FE+D DSLYLQLKDGFP ETEV+YVGSLN ++ +QE+VS LLE
Sbjct: 66 PLRAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLE 125
Query: 121 KFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFA 180
KF+CVPTFLP+D+ KYYHGFCKHYLWP+FHY+LP+T + G+ FDR W+AY + NK+FA
Sbjct: 126 KFQCVPTFLPSDLLSKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRAYTTVNKIFA 185
Query: 181 DKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEI 240
DK+ EV+NPD+DYVWIHDYHLM+LP+FLR RFHR+K+G FLHSPFPSSEIYRTLPVRDEI
Sbjct: 186 DKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEI 245
Query: 241 LKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHM 300
LK LN DL+GFHTFDYARHFLS CSRMLGL+YESKRGYIGL+YFGRTVSIKILPVGIHM
Sbjct: 246 LKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHM 305
Query: 301 GQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRG 360
GQ ESI + + T +KVK L+E+F G IV+LGVDD+D+FKGISLKF AMGQLLEQ+ +LRG
Sbjct: 306 GQIESIKASEETAEKVKGLRERFKGNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRG 365
Query: 361 KVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP-GYEPIVIIKEPLSTQDKVPY 419
KVVLVQITNPARSSGKDVQD+ N IA+EIN FG+P GY+PIV + P+ST DKV Y
Sbjct: 366 KVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFVNGPVSTLDKVAY 425
Query: 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479
YAI+EC VVN VRDGMNLVPYKYTV+RQGSP LD ALG E + +KSVIIVSEFIGCS
Sbjct: 426 YAISECVVVNAVRDGMNLVPYKYTVTRQGSPALDEALGFGEDD--VRKSVIIVSEFIGCS 483
Query: 480 PSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539
PSLSGAIRVNPWN+DAV DAM SA+ M ++EK LRH+KH+KYISSH+VAYWA+S DQDL+
Sbjct: 484 PSLSGAIRVNPWNIDAVTDAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWARSYDQDLQ 543
Query: 540 RACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQ 599
RAC+DH KR WGVG GL F++VAL P FR+L I AY +T+SRLILLDYDGT+M Q
Sbjct: 544 RACKDHFNKRFWGVGFGLFFKVVALDPNFRRLCAETIVPAYRRTSSRLILLDYDGTMMDQ 603
Query: 600 TSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWS 659
+ DKRPS +++S+LN LC+DP N VFIVSGRGKD L WF LG+SAEHGYFTRW+
Sbjct: 604 DTLDKRPSDDLISLLNRLCDDPNNLVFIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWN 663
Query: 660 KNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAK 719
NS WE L D WK+IA+PVM Y E TDGSFIE+KE+A+VWH+Q AD FGS QAK
Sbjct: 664 SNSPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHYQEADHSFGSWQAK 723
Query: 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
ELLDHLE+VL NEPVVVKRGQHIVEVKPQ
Sbjct: 724 ELLDHLESVLTNEPVVVKRGQHIVEVKPQ 752
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15224213|ref|NP_179460.1| putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 [Arabidopsis thaliana] gi|75216907|sp|Q9ZV48.1|TPS11_ARATH RecName: Full=Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11; AltName: Full=Trehalose-6-phosphate synthase 11; Short=AtTPS11 gi|4185136|gb|AAD08939.1| putative trehalose-6-phosphate synthase [Arabidopsis thaliana] gi|330251701|gb|AEC06795.1| putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/747 (68%), Positives = 609/747 (81%), Gaps = 12/747 (1%)
Query: 6 DLLNLISFDDFGTL--NRIP-GVMKVPGVISEFENKSNDGTTTIVEPCQRRIIVANQLPV 62
D L+L+S DD+ + NRIP V K+ G+ E +G + +P +RI+V+NQLP+
Sbjct: 8 DQLSLVSADDYRIMGRNRIPNAVTKLSGL----ETDDPNGGAWVTKP--KRIVVSNQLPL 61
Query: 63 KAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKF 122
+A+ + SNKW FE+D DSLYLQLKDGFP ETEV+YVGSLN ++ +QE+VS LLEKF
Sbjct: 62 RAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLEKF 121
Query: 123 KCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADK 182
+CVPTFLP+D+ KYYHGFCKHYLWP+FHY+LP+T + G+ FDR W+AY + NK+FADK
Sbjct: 122 QCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRAYTTVNKIFADK 181
Query: 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK 242
+ EV+NPD+DYVWIHDYHLM+LP+FLR RFHR+K+G FLHSPFPSSEIYRTLPVRDEILK
Sbjct: 182 IFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEILK 241
Query: 243 SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQ 302
LN DL+GFHTFDYARHFLS CSRMLGL+YESKRGYIGL+YFGRTVSIKILPVGIHMGQ
Sbjct: 242 GFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQ 301
Query: 303 FESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKV 362
ESI + + T +KVK L+E+F G IV+LGVDD+D+FKGISLKF AMGQLLEQ+ +LRGKV
Sbjct: 302 IESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRGKV 361
Query: 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP-GYEPIVIIKEPLSTQDKVPYYA 421
VLVQITNPARSSGKDVQD+ N IA+EIN FG+P GY+PIV I P+ST DKV YYA
Sbjct: 362 VLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFINGPVSTLDKVAYYA 421
Query: 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481
I+EC VVN VRDGMNLVPYKYTV+RQGSP LD ALG E + +KSVIIVSEFIGCSPS
Sbjct: 422 ISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDD--VRKSVIIVSEFIGCSPS 479
Query: 482 LSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541
LSGAIRVNPWN+DAV +AM SA+ M ++EK LRH+KH+KYISSH+VAYWA+S DQDL+RA
Sbjct: 480 LSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWARSYDQDLQRA 539
Query: 542 CRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS 601
C+DH KR WGVG GL F++VAL P FR+L I AY +++SRLILLDYDGT+M Q +
Sbjct: 540 CKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILLDYDGTMMDQDT 599
Query: 602 EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKN 661
DKRPS +++S+LN LC+DP N VFIVSGRGKD L WF LG+SAEHGYFTRW+ N
Sbjct: 600 LDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWNSN 659
Query: 662 SAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKEL 721
S WE L D WK+IA+PVM Y E TDGSFIE+KE+A+VWHHQ AD FGS QAKEL
Sbjct: 660 SPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEADHSFGSWQAKEL 719
Query: 722 LDHLENVLANEPVVVKRGQHIVEVKPQ 748
LDHLE+VL NEPVVVKRGQHIVEVKPQ
Sbjct: 720 LDHLESVLTNEPVVVKRGQHIVEVKPQ 746
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|60265771|gb|AAX16014.1| trehalose-6-phosphate synthase [Ginkgo biloba] gi|60265773|gb|AAX16015.1| trehalose-6-phosphate synthase [Ginkgo biloba] | Back alignment and taxonomy information |
|---|
Score = 1070 bits (2766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/753 (66%), Positives = 605/753 (80%), Gaps = 8/753 (1%)
Query: 2 RSSLDLLNLIS--FDDFG-TLNRIPGVMKVPGVISEFENKSNDGTTTIVEP--CQRR-II 55
RS +L++L + F FG R+P VM VPG+ISE ++ +++ ++ V CQ R II
Sbjct: 4 RSYTNLMDLATGNFPAFGRATKRLPRVMTVPGIISELDDDNSNSVSSDVPSSICQERMII 63
Query: 56 VANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVS 115
VANQLP++A D+ W F +D+DSL LQLKDG + EV+YVGSL VE+ + +Q++V+
Sbjct: 64 VANQLPLRAQRRPDNRGWAFSWDEDSLLLQLKDGLAEDMEVVYVGSLKVEVDLSEQDDVA 123
Query: 116 TILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSA 175
ILLE FKCVP FLP ++ K+YHGFCK LWPLFHYMLPL+ HG RFDR WQAY+SA
Sbjct: 124 QILLENFKCVPAFLPPELLTKFYHGFCKQQLWPLFHYMLPLSPDHGGRFDRSLWQAYVSA 183
Query: 176 NKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP 235
NK+FADKVMEVI+PD+DYVW+HDYHLMVLP+FLRKR +RVK+GFFLHSPFPSSEIYRTLP
Sbjct: 184 NKIFADKVMEVISPDDDYVWVHDYHLMVLPTFLRKRSNRVKLGFFLHSPFPSSEIYRTLP 243
Query: 236 VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP 295
VRDEIL++LLNSDLIGFHTFDYARHFLS CSRMLGL YESKRGYIGL+Y+GRTV IKILP
Sbjct: 244 VRDEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLEYESKRGYIGLEYYGRTVGIKILP 303
Query: 296 VGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355
VGIHMGQ ES+++L T +V EL+++F GKI++LGVDDMD+FKGISLKFLAM QLL+ H
Sbjct: 304 VGIHMGQLESVLNLADTEWRVGELRDQFKGKILLLGVDDMDIFKGISLKFLAMEQLLKLH 363
Query: 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415
P+ RGKVVLVQI NPAR GKDV+D+ ++T+ A+ IN FG+PGYEP+V+I P+ +
Sbjct: 364 PEWRGKVVLVQIANPARGRGKDVEDVQAETHSTAKRINETFGRPGYEPVVLIDRPVPFYE 423
Query: 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475
++ +Y IAEC V+ VRDGMNL PY+Y V RQGSP L+ LGV KKS+++VSEF
Sbjct: 424 RIAFYTIAECYVITAVRDGMNLTPYEYIVCRQGSPRLNETLGVSPNV--SKKSMLVVSEF 481
Query: 476 IGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535
IGCSPSLSGAIRVNPWN+DAVA+AM +A+ M EK LRHEKHY+Y+S+HDV YWA S
Sbjct: 482 IGCSPSLSGAIRVNPWNIDAVAEAMSTAITMPETEKQLRHEKHYRYVSTHDVGYWAHSFM 541
Query: 536 QDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGT 595
QDLERAC+DH +RCWG+G GLGFR+VAL P FRKL HI SAY +T SR ILLDYDGT
Sbjct: 542 QDLERACKDHFRRRCWGIGFGLGFRVVALDPNFRKLSTEHIVSAYKRTKSRAILLDYDGT 601
Query: 596 VMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655
+MPQTS +K P +EVL ILN LC+DPKN VFIVSGRG+ +L W S E LG++AEHGYF
Sbjct: 602 MMPQTSINKTPGSEVLFILNSLCSDPKNVVFIVSGRGRQTLSQWLSPCEMLGIAAEHGYF 661
Query: 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGS 715
RW++++ WE C DF WK+I EPVMKLYTETTDGS IE KE+A+VWHHQ ADP FGS
Sbjct: 662 IRWTRDAEWETCVQGVDFGWKQITEPVMKLYTETTDGSVIETKESALVWHHQDADPDFGS 721
Query: 716 CQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
CQAKELLDHLE+VLANEPVVVK GQHIVEVKPQ
Sbjct: 722 CQAKELLDHLESVLANEPVVVKSGQHIVEVKPQ 754
|
Source: Ginkgo biloba Species: Ginkgo biloba Genus: Ginkgo Family: Ginkgoaceae Order: Ginkgoales Class: Ginkgoopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424707|ref|XP_002264873.1| PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/751 (66%), Positives = 605/751 (80%), Gaps = 8/751 (1%)
Query: 2 RSSLDLLNLIS---FDDFGTLNRIPGVMKVPGVISEFEN-KSNDGTTTIVEPCQRRIIVA 57
RS + L+L S D T +P VM VPG+IS+ + SNDG + + +R+IIVA
Sbjct: 4 RSCANFLDLASGSLLDIPHTPRPLPRVMTVPGIISDLDGYGSNDGDSDVCH--ERKIIVA 61
Query: 58 NQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTI 117
N LP+ A +K + KW F D+D+L L LKDGF ETEVIYVGSL VEI +QEEV+
Sbjct: 62 NMLPLHAQRDKVTAKWCFSLDEDALLLHLKDGFSPETEVIYVGSLKVEIDASEQEEVAQK 121
Query: 118 LLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANK 177
LLE F CVPTFLP D+HKK+YHGFCK LWPLFHYMLP+ HG RFDR WQAY+SANK
Sbjct: 122 LLEDFNCVPTFLPHDLHKKFYHGFCKQQLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANK 181
Query: 178 VFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR 237
+FADKV EVINPD+DYVW+ DYHLMVLP+FLRKRFHRVK+GFFLHSPFPSSEIYRTLPVR
Sbjct: 182 IFADKVREVINPDDDYVWVQDYHLMVLPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVR 241
Query: 238 DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVG 297
DEIL+ LLN DLIGF TFDYARHFLS CSRMLGL+YESKRG+IGLDY GRTV IKILPVG
Sbjct: 242 DEILRGLLNCDLIGFQTFDYARHFLSCCSRMLGLDYESKRGHIGLDYSGRTVYIKILPVG 301
Query: 298 IHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPD 357
+HMG+ ES+++L T K+KE++++F+GK +ILGVDDMD+FKGISLKFLA+ QLL+QHP+
Sbjct: 302 VHMGRLESVLNLHSTSAKIKEIQKQFEGKKLILGVDDMDIFKGISLKFLAVEQLLQQHPE 361
Query: 358 LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417
L+GK+VLVQI NPARS+GKDVQ+ +T AE IN +G P YEP+++I P++ +K
Sbjct: 362 LQGKLVLVQIVNPARSTGKDVQEAKRETYLTAERINETYGSPNYEPVILIDRPVARYEKS 421
Query: 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477
YYA+AECC+VN VRDGMNLVPYKY V RQG+P +D+ G++ +PP S+++VSEFIG
Sbjct: 422 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPHMDKETGMNLVSPPT--SMLVVSEFIG 479
Query: 478 CSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537
CSPSLSGAIRVNPW+ DAVA+A++ A+ M N EK LRHEKHY+Y+SSHDVAYWA+S D
Sbjct: 480 CSPSLSGAIRVNPWDTDAVAEALNLAITMPNSEKQLRHEKHYRYVSSHDVAYWARSFMHD 539
Query: 538 LERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVM 597
L+RAC+DH KRCWG+GLGLGFR+V+L P FRKL + HI S Y +T R I LDYDGTV+
Sbjct: 540 LDRACKDHYSKRCWGIGLGLGFRVVSLSPSFRKLSIDHIVSTYKRTTRRAIFLDYDGTVV 599
Query: 598 PQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTR 657
PQ+S K PS EV+S+L+ LC+DPKN VFIVSGRG+ SL W + E+LG++AEHGYF R
Sbjct: 600 PQSSIIKSPSPEVISVLSTLCSDPKNTVFIVSGRGRSSLSEWLAPCERLGIAAEHGYFMR 659
Query: 658 WSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQ 717
W++++ WE C+L D DWK++ EPVM+LYTETTDGS IE KE+A+VWHHQ ADP FGSCQ
Sbjct: 660 WNESTKWESCNLAADLDWKKVVEPVMRLYTETTDGSNIEIKESALVWHHQDADPDFGSCQ 719
Query: 718 AKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
AKEL+DHLENVLANEP VVKRGQHIVEVKPQ
Sbjct: 720 AKELMDHLENVLANEPAVVKRGQHIVEVKPQ 750
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|147861933|emb|CAN78769.1| hypothetical protein VITISV_024248 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/751 (66%), Positives = 605/751 (80%), Gaps = 8/751 (1%)
Query: 2 RSSLDLLNLIS---FDDFGTLNRIPGVMKVPGVISEFEN-KSNDGTTTIVEPCQRRIIVA 57
RS + L+L S D T +P VM VPG+IS+ + SNDG + + +R+IIVA
Sbjct: 4 RSCANFLDLASGNLLDIPHTPRPLPRVMTVPGIISDLDGYGSNDGDSDVCH--ERKIIVA 61
Query: 58 NQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTI 117
N LP+ A +K + KW F D+D+L L LKDGF ETEVIYVGSL VEI +QEEV+
Sbjct: 62 NMLPLHAQRDKVTAKWCFSLDEDALLLHLKDGFSPETEVIYVGSLKVEIDASEQEEVAQK 121
Query: 118 LLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANK 177
LLE F CVPTFLP D+HKK+YHGFCK LWPLFHYMLP+ HG RFDR WQAY+SANK
Sbjct: 122 LLEDFNCVPTFLPHDLHKKFYHGFCKQQLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANK 181
Query: 178 VFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR 237
+FADKV EVINPD+DYVW+ DYHLMVLP+FLRKRFHRVK+GFFLHSPFPSSEIYRTLPVR
Sbjct: 182 IFADKVREVINPDDDYVWVQDYHLMVLPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVR 241
Query: 238 DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVG 297
DEIL+ LLN DLIGF TFDYARHFLS CSRMLGL+YESKRG+IGLDY GRTV IKILPVG
Sbjct: 242 DEILRGLLNCDLIGFQTFDYARHFLSCCSRMLGLDYESKRGHIGLDYSGRTVYIKILPVG 301
Query: 298 IHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPD 357
+HMG+ ES+++L T K+KE++++F+GK +ILGVDDMD+FKGISLKFLA+ QLL+QHP+
Sbjct: 302 VHMGRLESVLNLHSTSTKIKEIQKQFEGKKLILGVDDMDIFKGISLKFLAVEQLLQQHPE 361
Query: 358 LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417
L+GK+VLVQI NPARS+GKDVQ+ +T AE IN +G P YEP+++I P++ +K
Sbjct: 362 LQGKLVLVQIVNPARSTGKDVQEAKRETYLTAERINETYGSPNYEPVILIDRPVARYEKS 421
Query: 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477
YYA+AECC+VN VRDGMNLVPYKY V RQG+P +D+ G++ +PP S+++VSEFIG
Sbjct: 422 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPHMDKETGMNLVSPPT--SMLVVSEFIG 479
Query: 478 CSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537
CSPSLSGAIRVNPW+ DAVA+A++ A+ M N EK LRHEKHY+Y+SSHDVAYWA+S D
Sbjct: 480 CSPSLSGAIRVNPWDTDAVAEALNLAITMPNSEKQLRHEKHYRYVSSHDVAYWARSFMHD 539
Query: 538 LERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVM 597
L+RAC+DH KRCWG+GLGLGFR+V+L P FRKL + HI S Y +T R I LDYDGTV+
Sbjct: 540 LDRACKDHYSKRCWGIGLGLGFRVVSLSPSFRKLSIDHIVSTYKRTTRRAIFLDYDGTVV 599
Query: 598 PQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTR 657
PQ+S K PS EV+S+L+ LC+DPKN VFIVSGRG+ SL W + E+LG++AEHGYF R
Sbjct: 600 PQSSIIKSPSPEVISVLSTLCSDPKNTVFIVSGRGRSSLSEWLAPCERLGIAAEHGYFMR 659
Query: 658 WSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQ 717
W++++ WE C+L D DWK++ EPVM+LYTETTDGS IE KE+A+VWHHQ ADP FGSCQ
Sbjct: 660 WNESTKWESCNLAADLDWKKVVEPVMRLYTETTDGSNIEIKESALVWHHQDADPDFGSCQ 719
Query: 718 AKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
AKEL+DHLENVLANEP VVKRGQHIVEVKPQ
Sbjct: 720 AKELMDHLENVLANEPAVVKRGQHIVEVKPQ 750
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255584928|ref|XP_002533178.1| trehalose-6-phosphate synthase, putative [Ricinus communis] gi|223527012|gb|EEF29201.1| trehalose-6-phosphate synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1057 bits (2733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/697 (70%), Positives = 584/697 (83%), Gaps = 1/697 (0%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQ 111
RR++V+NQLP+ + K++NKW F D+DSL LQLKDGFP+ TEV YVG+L +I V DQ
Sbjct: 8 RRVVVSNQLPIISNLNKETNKWCFNLDKDSLVLQLKDGFPVNTEVCYVGTLKADIEVKDQ 67
Query: 112 EEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQA 171
+EVS +L +KFKCVP FL D+H +YHGFCKHYLWPL HYMLP++ SH ARFDR +W+A
Sbjct: 68 QEVSQLLFDKFKCVPVFLDLDMHNSFYHGFCKHYLWPLLHYMLPISPSHNARFDRSQWKA 127
Query: 172 YLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIY 231
Y+SAN FA KVMEV+NPDED+VWIHDYHLMVLP+ LRK++HR+KVGFFLH+ FPSSEIY
Sbjct: 128 YVSANIAFAGKVMEVLNPDEDFVWIHDYHLMVLPTLLRKKYHRIKVGFFLHNLFPSSEIY 187
Query: 232 RTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291
RT+PVR+EIL+ LN DL+GF TFDYARHFLS CSRMLGLNYESKRG++GLDYFGR V+I
Sbjct: 188 RTIPVREEILRGFLNCDLVGFQTFDYARHFLSCCSRMLGLNYESKRGHLGLDYFGRIVNI 247
Query: 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351
KILPVGIHMGQ E +++++ T + K+LK+K++GKIV++GVDD+D+FKGISLKFLA+ +L
Sbjct: 248 KILPVGIHMGQLEYLLNMEKTAKMAKQLKQKYEGKIVMVGVDDLDMFKGISLKFLAIWRL 307
Query: 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411
LEQH LRGK+VLVQITNPARS GKDVQ++ S+T I +IN +G Y PIV I P+
Sbjct: 308 LEQHESLRGKLVLVQITNPARSQGKDVQEVESETKLILRQINQLYGTAEYVPIVYINRPV 367
Query: 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471
STQ+K YYAI+ECCVVN +RDGMNLV YKYTV RQGSP LDR L +D+K+ P KKSV+I
Sbjct: 368 STQEKAAYYAISECCVVNAIRDGMNLVSYKYTVCRQGSPFLDRVLEIDKKSNP-KKSVLI 426
Query: 472 VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531
VSEFIGCSPSLSGAIRVNPWNVD VADAM A++M +EK LRH+KHYKYISSHDVAYWA
Sbjct: 427 VSEFIGCSPSLSGAIRVNPWNVDDVADAMFKAIKMSEEEKHLRHKKHYKYISSHDVAYWA 486
Query: 532 KSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLD 591
+S DQDLERACRDH KR WGVGLGL FRIVALGP FRKL M I AYNKT+SRLILLD
Sbjct: 487 RSFDQDLERACRDHYSKRYWGVGLGLNFRIVALGPNFRKLAMEPIVKAYNKTSSRLILLD 546
Query: 592 YDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAE 651
YDGT+ Q S DK P ++V+S+LN LC+DPKN +FIVSGRGKDSL NWFS E+LG++AE
Sbjct: 547 YDGTMKSQCSIDKAPRSDVISVLNCLCSDPKNVLFIVSGRGKDSLSNWFSPCERLGIAAE 606
Query: 652 HGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADP 711
HG+FTRW++++ WE C + D+ WK IAEPV+KLYTE TDGSFIE KE+A+VWH+ D
Sbjct: 607 HGFFTRWTRDTPWESCPIVMDYGWKRIAEPVLKLYTEATDGSFIEHKESALVWHYTETDS 666
Query: 712 HFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
HFG QAKELLDHLENVLANEPVVVKRGQ+IVEVKPQ
Sbjct: 667 HFGISQAKELLDHLENVLANEPVVVKRGQYIVEVKPQ 703
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255560009|ref|XP_002521023.1| trehalose-6-phosphate synthase, putative [Ricinus communis] gi|223539860|gb|EEF41440.1| trehalose-6-phosphate synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/753 (66%), Positives = 599/753 (79%), Gaps = 8/753 (1%)
Query: 2 RSSLDLLNLIS---FDDFGTLNRIPGVMKVPGVISEFENK-SNDGTTTIVEPC--QRRII 55
RS ++ L+L S D T IP VM VPG+IS+ + SNDG + + +R II
Sbjct: 4 RSYVNFLDLASGNLLDIPPTPRSIPRVMTVPGIISDLDGYCSNDGDSEVSSSIYREREII 63
Query: 56 VANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVS 115
VAN LP+ A + ++NKW F D+DSL LQLKDGF ETEVIYVGSL +I V++QEE+S
Sbjct: 64 VANMLPLHAKKDTETNKWCFSRDEDSLLLQLKDGFSPETEVIYVGSLKADIDVNEQEEIS 123
Query: 116 TILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSA 175
LLE F CVPTFLP D+ KK+Y GFCK LWP+FHYMLP+ HG RFDR WQAY+SA
Sbjct: 124 QKLLEDFNCVPTFLPQDLQKKFYLGFCKQQLWPIFHYMLPMCPDHGDRFDRIIWQAYVSA 183
Query: 176 NKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP 235
NK+FADKVME+I+P+EDYVW+HDYHLM+LP+FLRK ++RVK+GFFLHSPFPSSEIYRTLP
Sbjct: 184 NKIFADKVMEIISPEEDYVWVHDYHLMLLPTFLRKSYNRVKLGFFLHSPFPSSEIYRTLP 243
Query: 236 VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP 295
VRDEIL+ LLN DLIGF TFDYARHFLS CSRMLGL+YESKRG+IGLDYFGRTV IKILP
Sbjct: 244 VRDEILRGLLNCDLIGFQTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILP 303
Query: 296 VGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355
VGIHMG+ ES+M+L KVKE++EKF G+ VILG+DDMD+FKGISLK LAM QLLEQ+
Sbjct: 304 VGIHMGRLESVMNLPSASAKVKEIQEKFSGRKVILGIDDMDIFKGISLKLLAMEQLLEQN 363
Query: 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415
P+LRG+VVLVQI NPAR SGKDV++ +T A+ IN +G P YEP+++I P+ +
Sbjct: 364 PNLRGQVVLVQIVNPARGSGKDVEEAKRETYLTAKRINEVYGSPEYEPVILIDRPVPRYE 423
Query: 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475
K YYA+AECC+VN VRDGMNLVPYKY V RQG+P +D+A+G+ +P + S+I+VSEF
Sbjct: 424 KTAYYALAECCIVNAVRDGMNLVPYKYIVCRQGTPYMDKAMGIKSDSP--RTSMIVVSEF 481
Query: 476 IGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535
+GCSPSLSGAIRVNPW++DAVADA+ A+ M EK LRHEKHY+Y+S+HDVAYWA+S
Sbjct: 482 VGCSPSLSGAIRVNPWDIDAVADALSLAITMRESEKQLRHEKHYRYVSTHDVAYWARSFM 541
Query: 536 QDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGT 595
QDLERACRDH KRCWG+G GLGFR+V+L P FR+LG+ HI SAY +T+ R I LDYDGT
Sbjct: 542 QDLERACRDHYNKRCWGIGFGLGFRVVSLSPSFRRLGIDHIVSAYKRTSRRAIFLDYDGT 601
Query: 596 VMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655
V+PQTS K PS EV+S+L L +DP N VFIVSGRG+DSL W E+LG++AEHGYF
Sbjct: 602 VIPQTSIVKSPSPEVISVLKTLSDDPNNTVFIVSGRGRDSLSEWLDPCERLGIAAEHGYF 661
Query: 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGS 715
RW+K S WE ++ D DWK I EPVM+LYTE TDGS IE K++A+VWHHQ ADP FGS
Sbjct: 662 IRWNKISEWETTPVSDDLDWKNIVEPVMRLYTEATDGSSIEVKDSALVWHHQDADPDFGS 721
Query: 716 CQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
CQAKELLDHLENVLANEP VVKRGQHIVEVKPQ
Sbjct: 722 CQAKELLDHLENVLANEPAVVKRGQHIVEVKPQ 754
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457083|ref|XP_002283215.1| PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/749 (66%), Positives = 601/749 (80%), Gaps = 10/749 (1%)
Query: 3 SSLDLLNLISFDDFGTLNRIPGVMKVPGVISEFE-NKSNDGTTTIVEP-C-QRRIIVANQ 59
+S DLLN T +P VM VPG+IS+ + N SND + I C +++IIVAN
Sbjct: 14 ASGDLLNFPQ-----TPRTLPRVMTVPGIISDGDGNGSNDEDSDIFSSKCREKKIIVANF 68
Query: 60 LPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILL 119
LP+ A + ++ +W F +D+D+L LQ+KDGF ET+V+YVGSL V++ +QEEV+ LL
Sbjct: 69 LPLLAQKDLNTGRWCFSFDEDALLLQMKDGFSSETDVVYVGSLKVDVDTSEQEEVAERLL 128
Query: 120 EKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVF 179
+F CVPTFLP D+ KK+YHGFCK YLWPLFHYMLP++ H RFDR WQAY+SANK+F
Sbjct: 129 AEFNCVPTFLPPDLQKKFYHGFCKQYLWPLFHYMLPMSPEHCNRFDRFLWQAYVSANKIF 188
Query: 180 ADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDE 239
ADKVMEVINP+EDYVWIHDYHLM+LP+FLRKRF+RVK+GFFLHSPFPSSEIYRTLPVRD+
Sbjct: 189 ADKVMEVINPEEDYVWIHDYHLMILPTFLRKRFYRVKLGFFLHSPFPSSEIYRTLPVRDD 248
Query: 240 ILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIH 299
ILK+LLN+DL+GFHTFDYARHFLS CSRMLGLNYESKRG+IGL+YFGRTV +KILPVGIH
Sbjct: 249 ILKALLNADLVGFHTFDYARHFLSCCSRMLGLNYESKRGHIGLEYFGRTVYVKILPVGIH 308
Query: 300 MGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR 359
MGQ ES ++L T KVKE++E+F GK +ILGVDDMD+FKG+SLK LAM LL+ + +LR
Sbjct: 309 MGQLESALNLPSTSIKVKEIQEQFKGKKIILGVDDMDIFKGLSLKLLAMEHLLQHYEELR 368
Query: 360 GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419
G++VLVQI NPARS+GKDVQ+ +T I E IN NFG PGYEP+V+I P+ +K Y
Sbjct: 369 GELVLVQIVNPARSTGKDVQEAKRETYAITERINANFGFPGYEPVVLIDHPVPFYEKTAY 428
Query: 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479
YA+AECC+VN VRDGMNL+PY Y V RQG+P +D ALG+ + + S ++VSEFIGCS
Sbjct: 429 YALAECCIVNAVRDGMNLMPYNYIVCRQGTPKIDEALGITSGS--SRTSTLVVSEFIGCS 486
Query: 480 PSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539
PSLSGAIRVNPW++DAVADA++ A+ M EK LRHEKHY+Y+SSHDVAYWA S QDLE
Sbjct: 487 PSLSGAIRVNPWDIDAVADALNIAITMPGLEKQLRHEKHYRYVSSHDVAYWACSFMQDLE 546
Query: 540 RACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQ 599
RAC+DH KRCW +G GL FRIVAL P FRKL + HI AY + N R I LDYDGTV+PQ
Sbjct: 547 RACKDHYSKRCWSIGFGLSFRIVALSPNFRKLSLDHIVKAYKRANRRAIFLDYDGTVVPQ 606
Query: 600 TSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWS 659
+S K PS EV+SILNDLCNDPKN VFIVSGRGK+SL +WF+ + LG++AEHGYF RWS
Sbjct: 607 SSIVKTPSPEVISILNDLCNDPKNTVFIVSGRGKNSLSDWFAQCQNLGIAAEHGYFIRWS 666
Query: 660 KNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAK 719
++S WE L DFDWK IA+PVM+LYTE TDGS+IE KE+A+VWHHQ ADP FGSCQA
Sbjct: 667 QSSNWESRPLLMDFDWKRIADPVMQLYTEATDGSYIETKESALVWHHQDADPDFGSCQAM 726
Query: 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
ELLDHLENVLANEPV VKRG HIVEVKPQ
Sbjct: 727 ELLDHLENVLANEPVEVKRGHHIVEVKPQ 755
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 755 | ||||||
| TAIR|locus:2054027 | 862 | TPS11 "trehalose phosphatase/s | 0.973 | 0.852 | 0.689 | 4.7e-286 | |
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.986 | 0.859 | 0.625 | 1.8e-268 | |
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.984 | 0.863 | 0.643 | 2.1e-267 | |
| TAIR|locus:2195678 | 861 | TPS10 "trehalose phosphate syn | 0.981 | 0.860 | 0.634 | 1.1e-266 | |
| TAIR|locus:2016179 | 856 | TPS8 "trehalose-6-phosphatase | 0.982 | 0.866 | 0.635 | 5.1e-264 | |
| TAIR|locus:2129425 | 862 | TPS5 "trehalose phosphatase/sy | 0.985 | 0.863 | 0.616 | 5.6e-258 | |
| TAIR|locus:2202290 | 851 | TPS7 "trehalose-phosphatase/sy | 0.976 | 0.866 | 0.602 | 9.7e-254 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.499 | 0.514 | 0.394 | 9.2e-124 | |
| TAIR|locus:2202990 | 942 | TPS1 "trehalose-6-phosphate sy | 0.512 | 0.410 | 0.406 | 2.1e-107 | |
| SGD|S000000330 | 495 | TPS1 "Synthase subunit of treh | 0.517 | 0.789 | 0.403 | 1.6e-92 |
| TAIR|locus:2054027 TPS11 "trehalose phosphatase/synthase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2748 (972.4 bits), Expect = 4.7e-286, P = 4.7e-286
Identities = 515/747 (68%), Positives = 609/747 (81%)
Query: 6 DLLNLISFDDFGTL--NRIPG-VMKVPGVISEFENKSNDGTTTIVEPCQRRIIVANQLPV 62
D L+L+S DD+ + NRIP V K+ G+ E +G + +P +RI+V+NQLP+
Sbjct: 8 DQLSLVSADDYRIMGRNRIPNAVTKLSGL----ETDDPNGGAWVTKP--KRIVVSNQLPL 61
Query: 63 KAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKF 122
+A+ + SNKW FE+D DSLYLQLKDGFP ETEV+YVGSLN ++ +QE+VS LLEKF
Sbjct: 62 RAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLEKF 121
Query: 123 KCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADK 182
+CVPTFLP+D+ KYYHGFCKHYLWP+FHY+LP+T + G+ FDR W+AY + NK+FADK
Sbjct: 122 QCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRAYTTVNKIFADK 181
Query: 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK 242
+ EV+NPD+DYVWIHDYHLM+LP+FLR RFHR+K+G FLHSPFPSSEIYRTLPVRDEILK
Sbjct: 182 IFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEILK 241
Query: 243 SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQ 302
LN DL+GFHTFDYARHFLS CSRMLGL+YESKRGYIGL+YFGRTVSIKILPVGIHMGQ
Sbjct: 242 GFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQ 301
Query: 303 FESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKV 362
ESI + + T +KVK L+E+F G IV+LGVDD+D+FKGISLKF AMGQLLEQ+ +LRGKV
Sbjct: 302 IESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRGKV 361
Query: 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG-YEPIVIIKEPLSTQDKVPYYA 421
VLVQITNPARSSGKDVQD+ N IA+EIN FG+PG Y+PIV I P+ST DKV YYA
Sbjct: 362 VLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFINGPVSTLDKVAYYA 421
Query: 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481
I+EC VVN VRDGMNLVPYKYTV+RQGSP LD ALG E + +KSVIIVSEFIGCSPS
Sbjct: 422 ISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDDV--RKSVIIVSEFIGCSPS 479
Query: 482 LSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541
LSGAIRVNPWN+DAV +AM SA+ M ++EK LRH+KH+KYISSH+VAYWA+S DQDL+RA
Sbjct: 480 LSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWARSYDQDLQRA 539
Query: 542 CRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS 601
C+DH KR WGVG GL F++VAL P FR+L I AY +++SRLILLDYDGT+M Q +
Sbjct: 540 CKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILLDYDGTMMDQDT 599
Query: 602 EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKN 661
DKRPS +++S+LN LC+DP N VFIVSGRGKD L WF LG+SAEHGYFTRW+ N
Sbjct: 600 LDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWNSN 659
Query: 662 SAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKEL 721
S WE L D WK+IA+PVM Y E TDGSFIE+KE+A+VWHHQ AD FGS QAKEL
Sbjct: 660 SPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEADHSFGSWQAKEL 719
Query: 722 LDHLENVLANEPVVVKRGQHIVEVKPQ 748
LDHLE+VL NEPVVVKRGQHIVEVKPQ
Sbjct: 720 LDHLESVLTNEPVVVKRGQHIVEVKPQ 746
|
|
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2582 (914.0 bits), Expect = 1.8e-268, P = 1.8e-268
Identities = 471/753 (62%), Positives = 594/753 (78%)
Query: 2 RSSLDLLNLISFD--DFGTLNR-IPGVMKVPGVISEFENKSNDGTTTIVEPC---QRRII 55
RS + L+L S+D DF R +P VM VPG+ISE + +DG++ + +R+II
Sbjct: 4 RSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYSDGSSDVNSSNSSRERKII 63
Query: 56 VANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVS 115
VAN LP++A + ++ +W F +D+DSL LQL+DGF +TE +Y+GSLN +IG+ +QEEVS
Sbjct: 64 VANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISEQEEVS 123
Query: 116 TILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSA 175
LL F CVPTFLP ++ +K+Y GFCKH+LWPLFHYMLP+ HG RFDR WQAY+SA
Sbjct: 124 HKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQAYVSA 183
Query: 176 NKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP 235
NK+F+D+VMEVINP+EDYVWIHDYHLMVLP+FLRKRF+R+K+GFFLHSPFPSSEIYRTLP
Sbjct: 184 NKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP 243
Query: 236 VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP 295
VRD++L+ LLN DLIGFHTFDYARHFLS CSRMLGL+YESKRG+IGLDYFGRTV IKILP
Sbjct: 244 VRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILP 303
Query: 296 VGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355
VGIHMG+ ES+++L T K+KE++E+F GK +ILGVDDMD+FKGISLK +AM +L E +
Sbjct: 304 VGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMERLFETY 363
Query: 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415
+RGK+VL+QI NPAR++GKDV++ +T A+ IN +G GY+P+++I + +
Sbjct: 364 WHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLVPRYE 423
Query: 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475
K YYA+A+CC+VN VRDGMNLVPYKY + RQG+P +D+A+G+ + + S+++VSEF
Sbjct: 424 KTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSA--RTSMLVVSEF 481
Query: 476 IGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535
IGCSPSLSGAIRVNPW+VDAVA+A++ AL M EK LRHEKHY Y+S+HDV YWAKS
Sbjct: 482 IGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSFM 541
Query: 536 QDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGT 595
QDLERACR+H KRCWG+G GL FR+++L P FRKL + HI S Y T R I LDYDGT
Sbjct: 542 QDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYDGT 601
Query: 596 VMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655
++P++S K P+ EVLS+L LC DPKN VF+VSGRG +SL +W S E LG++AEHGYF
Sbjct: 602 LVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHGYF 661
Query: 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGS 715
RWS WE C + + +WK + EPVM+ Y + TDGS IE KE+A+VWHHQ ADP FG+
Sbjct: 662 IRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDFGA 721
Query: 716 CQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
CQAKELLDHLE+VLANEPVVVKRGQHIVEVKPQ
Sbjct: 722 CQAKELLDHLESVLANEPVVVKRGQHIVEVKPQ 754
|
|
| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2572 (910.4 bits), Expect = 2.1e-267, P = 2.1e-267
Identities = 493/766 (64%), Positives = 595/766 (77%)
Query: 2 RSSLDLLNLISFDD--FGTLNR-IPGVMKVPGVISEFENKSNDGTTTIVEPCQRRIIVAN 58
RS +LL L S D FG +NR IP +M V G++S +N S D T + P R IIVAN
Sbjct: 4 RSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDNDSKD---TDLSPKDRIIIVAN 60
Query: 59 QLPVKAYYEKDSNK-------------WGFEYDQDSLYLQLKDGFPLET-EVIYVGSLNV 104
+LP++A D N W F +D++SL LQLKDG E EVIYVG L
Sbjct: 61 ELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIYVGCLKE 120
Query: 105 EIGVDDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARF 164
EI +++QEEV ILLE FKCVPTFLP D++ +YYHGFCK LWPLFHYMLPL+ G RF
Sbjct: 121 EIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSPDLGGRF 180
Query: 165 DRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSP 224
DR WQAY+S NK+FAD++MEVINP++D+VWIHDYHLMVLP+FLRKRF+RVK+GFFLHSP
Sbjct: 181 DRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSP 240
Query: 225 FPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDY 284
FPSSEIY+TLP+R+E+L++LLNSDLIGFHTFDYARHFLS CSRMLGL YESKRGYIGL+Y
Sbjct: 241 FPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEY 300
Query: 285 FGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFD--GKIVILGVDDMDLFKGIS 342
+GRTVSIKILPVGIHMGQ +S++SL T +KV EL E++ G+ ++LGVDDMD+FKGI+
Sbjct: 301 YGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMDIFKGIT 360
Query: 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402
LK LAM QLL QHP+ +GKVVLVQI NPAR GKDV+++ ++T + IN FG+PGY+
Sbjct: 361 LKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETFGRPGYD 420
Query: 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKN 462
PIV+I PL ++V YY +AECC+V VRDGMNL+PY+Y VSRQG+ LD+ L + E N
Sbjct: 421 PIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKILKL-EAN 479
Query: 463 PPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI 522
KKS+++VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSAL++ EK LRHEKHYKY+
Sbjct: 480 NRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEKHYKYV 539
Query: 523 SSHDVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNK 582
S+HDV YWA+S QDLER+C +H +RCWG+G GL FR+VAL FRKL M HI SAY +
Sbjct: 540 STHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIVSAYKR 599
Query: 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642
T +R ILLDYD T+MPQ S DKRPS++ + ILN LC D N VFIVS + +++L +WFS
Sbjct: 600 TKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLSDWFSP 659
Query: 643 VEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAI 702
EKLG++AEHGYF R K WE C D WK+IAEPVM+LYTETTDGS IEDKETA+
Sbjct: 660 CEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIEDKETAL 719
Query: 703 VWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
VW ++ ADP FGSCQAKELLDHLE+VLANEPV VKRGQ+ VEVKPQ
Sbjct: 720 VWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQ 765
|
|
| TAIR|locus:2195678 TPS10 "trehalose phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2565 (908.0 bits), Expect = 1.1e-266, P = 1.1e-266
Identities = 475/749 (63%), Positives = 582/749 (77%)
Query: 6 DLLNLISFD--DFGTLNR-IPGVMKVPGVISEFENKS-NDGTTTIVE-PC-QRRIIVANQ 59
+LL+L S D D R +P VM VPG+IS+ + +DG + ++ PC +R+IIVAN
Sbjct: 8 NLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCRERKIIVANF 67
Query: 60 LPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILL 119
LP+ + ++ KW F D DS L LKDGF ETEVIYVGSL + V +Q+EVS L
Sbjct: 68 LPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQDEVSHNLF 127
Query: 120 EKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVF 179
E+F CV TFLP DVHKK+Y GFCK LWPLFHYMLP+ HG RFDRG WQAY+SANK+F
Sbjct: 128 EEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQAYVSANKIF 187
Query: 180 ADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDE 239
ADKVM VIN +EDY+WIHDYHLMVLP+FLR+RFHRVK+GFFLHSPFPSSEIYRTLPVR+E
Sbjct: 188 ADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVREE 247
Query: 240 ILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIH 299
+L+ LLN DLIGFHTFDYARHFLS C RMLGL YESKRG+I LDY GRTV +KILP+GIH
Sbjct: 248 LLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLKILPIGIH 307
Query: 300 MGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR 359
MG+ ES+++L T +K+KE++EK+ GK +ILGVDDMD+FKG+SLK LA LL+Q+P +
Sbjct: 308 MGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHLLQQYPSML 367
Query: 360 GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419
GK+VL+QI NPAR SGKDVQ+ +T + IN +G YEP+V+I P+ +K Y
Sbjct: 368 GKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVPRFEKSAY 427
Query: 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479
YA+AECC+VN VRDGMNLVPYKYTV RQG+P ++++LGV + P + S +++SEFIGCS
Sbjct: 428 YALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLP--RTSTLVLSEFIGCS 485
Query: 480 PSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539
PSLSGAIRVNPW+VDAVAD++ SA+ M + EK LRH+KH+ YIS+HDV YWA+S QDLE
Sbjct: 486 PSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSFSQDLE 545
Query: 540 RACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQ 599
RA RDH KRCWGVG GLGFR+VAL P FR+L + SAY +++ R I LDYDGT++P+
Sbjct: 546 RASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYDGTLVPE 605
Query: 600 TSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWS 659
TS K PS EV+S L LC+DP N +FIVSGRGK SL W + E LG++AEHGYFTRW+
Sbjct: 606 TSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGYFTRWN 665
Query: 660 KNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAK 719
K+S WE L+ D +WK++ EP+M+LYTETTDGS IE KE+A+VWHHQ ADP FGSCQAK
Sbjct: 666 KSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFGSCQAK 725
Query: 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
ELLDHLE VL NEPV+V RG IVEVKPQ
Sbjct: 726 ELLDHLETVLVNEPVIVNRGHQIVEVKPQ 754
|
|
| TAIR|locus:2016179 TPS8 "trehalose-6-phosphatase synthase S8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2540 (899.2 bits), Expect = 5.1e-264, P = 5.1e-264
Identities = 477/751 (63%), Positives = 587/751 (78%)
Query: 2 RSSLDLLNLISFD--DFGTLNR-IPGVMKVPGVISEFE-NKSNDGTTTIVEPCQRRIIVA 57
RS + L+L S+D DF R +P VM VPG+I++ + + +++ T+T +R+IIVA
Sbjct: 4 RSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTSTSGGSRERKIIVA 63
Query: 58 NQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTI 117
N LP+++ + ++ KW F +D+DSL LQL+DGF ETE +YVGSLNV+I ++QEEVS
Sbjct: 64 NMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQEEVSQK 123
Query: 118 LLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANK 177
LLE+F CV TFL ++ + +Y GFCKH LWPLFHYMLP+ HG RFDR WQAY+SANK
Sbjct: 124 LLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQAYVSANK 183
Query: 178 VFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR 237
+F+D+VMEVINP++DYVWI DYHLMVLP+FLRKRF+R+K+GFFLHSPFPSSEIYRTLPVR
Sbjct: 184 IFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVR 243
Query: 238 DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVG 297
DEIL+ LLN DLIGFHTFDYARHFLS CSRMLGL+YESKRG+IGLDYFGRTV IKILPVG
Sbjct: 244 DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVG 303
Query: 298 IHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPD 357
+HMG+ ES++SLD T K KE++E+F GK ++LG+DDMD+FKGISLK +AM L E +
Sbjct: 304 VHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHLFETYWH 363
Query: 358 LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417
L+GKVVLVQI NPARSSGKDV++ +T A IN +G Y+PIV+I + +K
Sbjct: 364 LKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLVPRSEKT 423
Query: 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477
YYA A+CC+VN VRDGMNLVPYKY V RQG+ ++A+ VD +P + S ++VSEFIG
Sbjct: 424 AYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRS-NKAV-VDS-SP--RTSTLVVSEFIG 478
Query: 478 CSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537
CSPSLSGAIRVNPW+VDAVA+A++SAL+M EK LRHEKHY YIS+HDV YWAKS QD
Sbjct: 479 CSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSFMQD 538
Query: 538 LERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVM 597
LERACRDH KRCWG+G GLGFR+++L P FRKL + HI Y KT R I LDYDGT++
Sbjct: 539 LERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDGTLV 598
Query: 598 PQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTR 657
P++S + PS EV+S+L LC DP N VFIVSGRG++SL NW S E LG++AEHGYF R
Sbjct: 599 PESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGYFIR 658
Query: 658 WSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQ 717
W WE C D +W+ + EPVM+ Y E TDG+ IE KE+A+VWHHQ ADP FGSCQ
Sbjct: 659 WKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFGSCQ 718
Query: 718 AKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
AKE+LDHLE+VLANEPVVVKRGQHIVEVKPQ
Sbjct: 719 AKEMLDHLESVLANEPVVVKRGQHIVEVKPQ 749
|
|
| TAIR|locus:2129425 TPS5 "trehalose phosphatase/synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2483 (879.1 bits), Expect = 5.6e-258, P = 5.6e-258
Identities = 465/754 (61%), Positives = 580/754 (76%)
Query: 2 RSSLDLLNLIS--FDDFGT-LNRIPGVMKVPGVISEFENKSNDGTTTIVEPCQ----RRI 54
RS +LL+L S F F R P V V GV+SE ++ +N + P R I
Sbjct: 4 RSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVTQDRII 63
Query: 55 IVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEV 114
IV NQLP+K++ + K F +D DSL LQLKDG + EV+Y+G L +I +Q++V
Sbjct: 64 IVGNQLPIKSH-RNSAGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVEQDDV 122
Query: 115 STILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLS 174
S LLE FKCVP ++P ++ KYYHGFCK +LWPLFHYMLPLT G RFDR WQAYLS
Sbjct: 123 SQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQAYLS 182
Query: 175 ANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTL 234
NK+FADKVMEVI+PD+D+VW+HDYHLMVLP+FLRKRF+RVK+GFFLHSPFPSSEIYRTL
Sbjct: 183 VNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL 242
Query: 235 PVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKIL 294
PVR+E+L++LLN+DLIGFHTFDYARHFLS CSRMLGL+Y+SKRG IGL+Y+GRTVSIKIL
Sbjct: 243 PVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVSIKIL 302
Query: 295 PVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQ 354
PVGIH+ Q +SI++L T KV EL+++F + V+LGVDDMD+FKGISLK LAM QLL Q
Sbjct: 303 PVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQLLTQ 362
Query: 355 HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414
HP+ RG+VVLVQI NPAR GKDVQ++ S+T + IN FG+PGY+P+V+I PL
Sbjct: 363 HPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTPLQFF 422
Query: 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE 474
+++ YY IAECC+V VRDGMNL+PY+Y + RQG+P L+ +G+D KKS+++VSE
Sbjct: 423 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPS--AAKKSMLVVSE 480
Query: 475 FIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSI 534
FIGCSPSLSGAIRVNPWN+DAV +AMD AL + EK +RHEKH+KY+S+HDVAYWA+S
Sbjct: 481 FIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWARSF 540
Query: 535 DQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDG 594
QDLERAC DH+ KRCWG+G GLGFR+VAL P F+KL + HI SAY +T +R ILLDYDG
Sbjct: 541 IQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDYDG 600
Query: 595 TVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGY 654
T++ S P+ E + ILN+L +DPKN V++VSG+ + +L WFS + LGL AEHGY
Sbjct: 601 TMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEHGY 660
Query: 655 FTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFG 714
F R + + WE SL F+WK+IAEPVM+LYTETTDGS IE KETA+VW++Q ADP FG
Sbjct: 661 FIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDFG 720
Query: 715 SCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
SCQAKEL++HLE+VL N+PV VK GQ +VEVKPQ
Sbjct: 721 SCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQ 754
|
|
| TAIR|locus:2202290 TPS7 "trehalose-phosphatase/synthase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2443 (865.0 bits), Expect = 9.7e-254, P = 9.7e-254
Identities = 455/755 (60%), Positives = 574/755 (76%)
Query: 2 RSSLDLLNLIS--FDDFGT-LNRIPGVMKVPGVISEFENK-----SNDGTTTIVEPCQRR 53
RS +LL+L S F G R+P VM VPG +SEF+ S+D +++ R
Sbjct: 4 RSYTNLLDLASGNFPVMGRERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSS--DRM 61
Query: 54 IIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEE 113
IIVAN+LP+KA EK + W F +DQDSLYLQLKDG P + E++YVGSL+V++ ++Q++
Sbjct: 62 IIVANRLPLKA--EKRNGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQDD 119
Query: 114 VSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYL 173
V+ ILL+KFKCVPTF P D+ K+Y GFCK +WPLFHYMLP +A HG RFDR W+AY+
Sbjct: 120 VAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEAYV 179
Query: 174 SANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT 233
+ NK+F KV+EVINPD+D+VWIHDYHLMVLP+FLR+RF+R+++GFFLHSPFPSSEIYR+
Sbjct: 180 ATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIYRS 239
Query: 234 LPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKI 293
LPVR+EILK+LLNSDLIGFHTFDYARHFL+ CSRMLGL Y+SKRGYIGL+Y+GRTV IKI
Sbjct: 240 LPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGIKI 299
Query: 294 LPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLE 353
+PVGI+MG+ +S+M KV EL+ +F+GK V+LG+DDMD+FKGI+LK LAM Q+L
Sbjct: 300 MPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQMLR 359
Query: 354 QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLST 413
QHP+ RG+ VLVQI NPAR G DV+++ + IN FGKPGY+PI+ I P+S
Sbjct: 360 QHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPVSI 419
Query: 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS 473
+ YY IAEC VV VRDGMNL PY+Y V RQG LG + KKS+++ S
Sbjct: 420 NEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQG------LLGSESDFSGPKKSMLVAS 473
Query: 474 EFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKS 533
EFIGCSPSLSGAIRVNPWNV+A +A++ AL M + EK LRHEKH++Y+S+HDVAYW++S
Sbjct: 474 EFIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSRS 533
Query: 534 IDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYD 593
QDLER C DH KRCWG+G+ GFR+VAL P FRKL + I S Y + SR ILLDYD
Sbjct: 534 FLQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDYD 593
Query: 594 GTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHG 653
GT+MPQ S +K PS EVL+ L+ LC D KN++FIVSGRG++SL WF+ +K+G++AEHG
Sbjct: 594 GTLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEHG 653
Query: 654 YFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHF 713
YF +WS + WE C + DF W +I EPVMK YTE+TDGS IE KE+A+VW ++ ADP F
Sbjct: 654 YFLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPGF 713
Query: 714 GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
GS QAKE+L+HLE+VLANEPV VK G +IVEVKPQ
Sbjct: 714 GSLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQ 748
|
|
| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 763 (273.6 bits), Expect = 9.2e-124, Sum P(2) = 9.2e-124
Identities = 156/395 (39%), Positives = 238/395 (60%)
Query: 52 RRIIVANQLPVKAYYEKDSN-KWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDD 110
R I+V+N+LPV +K+SN KW + L L L++ I+VG + EI DD
Sbjct: 17 RLIVVSNRLPVSI--KKESNGKWSCKMSSGGLVAALSG---LKSNFIWVGWIGAEIEEDD 71
Query: 111 QEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQ 170
++E+ +L + + C+P FL V ++Y+GF LWPLFHY LP + R W
Sbjct: 72 RKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLDYDDRI----WN 126
Query: 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEI 230
+Y+ AN+ F+ V E++ P+ D VW+HDYH+M+LP L+++ ++GFFLH PFPSSEI
Sbjct: 127 SYVEANEQFSSVVAEILKPN-DLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEI 185
Query: 231 YRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290
+R LP R EIL +LN LIGFHT+DYARHFL SC+R++GL G+ + R V
Sbjct: 186 FRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKDRFVQ 241
Query: 291 IKILPVGIHMGQF-ESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMG 349
+ + PVGI +F ES+ + V ++KELKE F+G V++G+D +D KGI K A+
Sbjct: 242 VGVFPVGIDPDKFFESLKTTQVQN-RIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIE 300
Query: 350 QLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKE 409
+L +++P+ +GK+VL+Q+ P+R ++ Q L + + IN +G GY PI + +
Sbjct: 301 RLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQ 360
Query: 410 PLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTV 444
+ + Y I++ ++ +RDGMNLV +Y V
Sbjct: 361 SVDPSELTALYNISDAALITSIRDGMNLVAQEYIV 395
|
|
| TAIR|locus:2202990 TPS1 "trehalose-6-phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 733 (263.1 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 163/401 (40%), Positives = 235/401 (58%)
Query: 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNV--EIGV 108
QR ++VAN+LPV A + + W E L L E I +NV E+G
Sbjct: 92 QRLLVVANRLPVSAV-RRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVG- 149
Query: 109 DDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYM-LPLTASHGA-RFDR 166
Q+ +S L EK +C+P FL ++ +YY+G+C + LWPLFHY+ LP R +
Sbjct: 150 --QKALSKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ 206
Query: 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP 226
++ AY AN++FAD V E + D VW HDYHLM LP L++ ++KVG+FLH+PFP
Sbjct: 207 SQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFP 265
Query: 227 SSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFG 286
SSEI+RTLP R E+L+S+L +DL+GFHT+DYARHF+S+C+R+LGL + G++ G
Sbjct: 266 SSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQG 321
Query: 287 RTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFL 346
R + P+GI +F + + Q +KELKE+F G+ V+LGVD +D+ KGI K L
Sbjct: 322 RLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAGRKVMLGVDRLDMIKGIPQKIL 381
Query: 347 AMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406
A + LE++ + R KVVL+QI P R+ + Q L S + I IN FG PI
Sbjct: 382 AFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHH 441
Query: 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447
+ L YA+ + +V +RDGMNLV Y++ ++
Sbjct: 442 LDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQE 482
|
|
| SGD|S000000330 TPS1 "Synthase subunit of trehalose-6-P synthase/phosphatase complex" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 767 (275.1 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 167/414 (40%), Positives = 246/414 (59%)
Query: 54 IIVANQLPVKAYYEKDSNKWGFEYDQDS--LYLQLKDGFPLETEVIYVGSLNVEIGVDDQ 111
I+V+N+LPV K+S+ +EY S L L +G + G +EI D++
Sbjct: 19 IVVSNRLPVTI--TKNSSTGQYEYAMSSGGLVTAL-EGLKKTYTFKWFGWPGLEIPDDEK 75
Query: 112 EEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQA 171
++V LLEKF VP FL ++ +Y+GF LWPLFHY P + FD W A
Sbjct: 76 DQVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSILWPLFHYH-PGEIN----FDENAWLA 130
Query: 172 YLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHR-----VKVGFFLHSPFP 226
Y AN+ F +++ + +N + D +W+HDYHLM++P LR + H VKVG+FLH+PFP
Sbjct: 131 YNEANQTFTNEIAKTMNHN-DLIWVHDYHLMLVPEMLRVKIHEKQLQNVKVGWFLHTPFP 189
Query: 227 SSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFG 286
SSEIYR LPVR EILK +L+ DL+GFHT+DYARHFLSS R+L +N G++Y G
Sbjct: 190 SSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTLPN----GVEYQG 245
Query: 287 RTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFL 346
R V++ P+GI + +F + + +++++LKE F G +I+GVD +D KG+ K
Sbjct: 246 RFVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRLDYIKGVPQKLH 305
Query: 347 AMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406
AM L +HP+ RGKVVLVQ+ P+R ++ Q L S N + IN FG + PI
Sbjct: 306 AMEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTVEFVPIHF 365
Query: 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTV---SRQGSPVLDRALG 457
+ + + ++ + YA+++ C+V+ RDGMNLV Y+Y ++GS +L G
Sbjct: 366 MHKSIPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQEEKKGSLILSEFTG 419
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q54K57 | TPSA_DICDI | 2, ., 4, ., 1, ., 1, 5 | 0.3676 | 0.8304 | 0.8553 | yes | no |
| Q9ZV48 | TPS11_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.6894 | 0.9735 | 0.8526 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 755 | |||
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 1e-154 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 1e-153 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-142 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-141 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 7e-65 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 3e-61 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 6e-61 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 7e-34 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 3e-15 | |
| TIGR01484 | 204 | TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, | 1e-08 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 7e-05 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 1092 bits (2826), Expect = 0.0
Identities = 493/758 (65%), Positives = 602/758 (79%), Gaps = 13/758 (1%)
Query: 2 RSSLDLLNLISFDD--FGTLNR-IPGVMKVPGVISEFENKSNDGT----TTIVEPCQRRI 54
RS +LL L S + FG +NR IP +M V G++S+ ++ ++ ++ P R I
Sbjct: 4 RSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRII 63
Query: 55 IVANQLPVKAYYEKDSNK-WGFEYDQDSLYLQLKDGF-PLETEVIYVGSLNVEIGVDDQE 112
IVANQLP++A + D +K W F +D++SL LQLKDG E EVIYVG L EI +++QE
Sbjct: 64 IVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQE 123
Query: 113 EVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAY 172
EVS ILLE FKCVPTFLP D+ +YYHGFCK LWPLFHYMLPL+ G RF+R WQAY
Sbjct: 124 EVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAY 183
Query: 173 LSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR 232
+S NK+FAD++MEVINP++D+VWIHDYHLMVLP+FLRKRF+RVK+GFFLHSPFPSSEIY+
Sbjct: 184 VSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK 243
Query: 233 TLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIK 292
TLP+R+E+L++LLNSDLIGFHTFDYARHFLS CSRMLGL+YESKRGYIGL+Y+GRTVSIK
Sbjct: 244 TLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIK 303
Query: 293 ILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFKGISLKFLAMGQ 350
ILPVGIHMGQ +S++SL T KVKEL ++F +I++LGVDDMD+FKGISLK LAM Q
Sbjct: 304 ILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQ 363
Query: 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410
LL QHP+ +GKVVLVQI NPAR GKDV+++ ++T+ + IN FGKPGY+PIV+I P
Sbjct: 364 LLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAP 423
Query: 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470
L ++V YY +AECC+V VRDGMNL+PY+Y +SRQG+ LD+ LG++ P KKS++
Sbjct: 424 LKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTP--KKSML 481
Query: 471 IVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530
+VSEFIGCSPSLSGAIRVNPWN+DAVADAMDSAL+M EK LRHEKHY+Y+S+HDV YW
Sbjct: 482 VVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYW 541
Query: 531 AKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILL 590
A+S QDLER CRDH +RCWG+G GL FR+VAL P FRKL M HI SAY +T +R ILL
Sbjct: 542 ARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILL 601
Query: 591 DYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSA 650
DYDGT+MPQ S DK PS++ + ILN LC D N VFIVS R + +L +WFS EKLG++A
Sbjct: 602 DYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAA 661
Query: 651 EHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHAD 710
EHGYF R ++ WE C D WK+IAEPVM+LYTETTDGS IEDKETA+VW ++ AD
Sbjct: 662 EHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDAD 721
Query: 711 PHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
P FGSCQAKELLDHLE+VLANEPV VK GQ+IVEVKPQ
Sbjct: 722 PDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQ 759
|
Length = 854 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 640 bits (1654), Expect = 0.0
Identities = 230/494 (46%), Positives = 306/494 (61%), Gaps = 28/494 (5%)
Query: 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSL-YLQLKDGFPLETEVIYVGSLNVEIGVD 109
R ++V+N+LPV A E++ KW F S + +G TE ++VG V + D
Sbjct: 1 SRLVVVSNRLPVTAKREEEG-KWEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDED 59
Query: 110 -DQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGE 168
++ VS +L EKF CVP FL + +YY+GF LWPLFHY LP ++ FDR
Sbjct: 60 EPKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPP--NNEDEFDRSW 117
Query: 169 WQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS 228
W AY+ NK+FADK++EV D +W+HDYHLM+LP LRKR K+GFFLH PFPSS
Sbjct: 118 WDAYVKVNKLFADKIVEVYKDG-DLIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSS 176
Query: 229 EIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT 288
EI+R LPVR+EIL+ LL +DLIGFHT+DYARHFLS CSR+LGL S G++Y GRT
Sbjct: 177 EIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDG---GVEYGGRT 233
Query: 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKI-VILGVDDMDLFKGISLKFLA 347
VS+ P+GI G+ ES + +KVKELKE+F K +ILGVD +D KGI K LA
Sbjct: 234 VSVGAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLA 293
Query: 348 MGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVII 407
+ LE++P+ RGKVVLVQI P+R ++ Q+L S + IN FG Y P+ +
Sbjct: 294 FERFLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHL 353
Query: 408 KEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKK 467
L + + YAIA+ C+V +RDGMNLV Y+Y +Q +K
Sbjct: 354 HRSLDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQD-----------------RK 396
Query: 468 SVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHD 526
V+I+SEF G + SL GAI VNPW+++ VA+A++ AL M +E+ RH K +KYIS HD
Sbjct: 397 GVLILSEFAGAAQSLNDGAILVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHD 456
Query: 527 VAYWAKSIDQDLER 540
V YWA+S DL+R
Sbjct: 457 VQYWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 567 bits (1465), Expect = 0.0
Identities = 191/488 (39%), Positives = 277/488 (56%), Gaps = 28/488 (5%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQ 111
R ++V+N+LPV + D ++ G T ++VG +E +++
Sbjct: 1 RLVVVSNRLPVSIERDGD-GEFEAR-RSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEE 58
Query: 112 EEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQA 171
+EVST LL ++ P FL + + YY+GF LWPLFHY L L ARFDR +W+A
Sbjct: 59 DEVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEA 113
Query: 172 YLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIY 231
Y+ N+ FAD + EV+ P D VW+HDYHL++LP LR+R ++GFFLH PFPSSEI+
Sbjct: 114 YVRVNRKFADAIAEVLRPG-DLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIF 172
Query: 232 RTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291
R LP R+E+L+ LL +DLIGF T YAR+FLS CSR+LGL G++Y GR V +
Sbjct: 173 RCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTD---DGGVEYGGRRVRV 229
Query: 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351
P+GI F + + ++ EL+E+ G+ +I+GVD +D KGI + LA +L
Sbjct: 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERL 289
Query: 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411
LE++P+ RGKVVLVQI P+R+ + Q+L + + IN FG + P+ + L
Sbjct: 290 LERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSL 349
Query: 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471
++ Y A+ +V +RDGMNLV +Y + V+I
Sbjct: 350 PREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD-----------------DPGVLI 392
Query: 472 VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531
+SEF G + LSGA+ VNP+++D VADA+ AL M +E+ RH K +Y+ +HDV WA
Sbjct: 393 LSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWA 452
Query: 532 KSIDQDLE 539
S DL
Sbjct: 453 NSFLDDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 540 bits (1393), Expect = 0.0
Identities = 241/703 (34%), Positives = 367/703 (52%), Gaps = 56/703 (7%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDS--LYLQLKDGFPLETEVIYVG--SLNVEIG 107
R IIV+N+LPV E G E L L+ F ++VG L++E
Sbjct: 2 RLIIVSNRLPVTVVREDG----GVELTPSVGGLATGLR-SFHERGGGLWVGWPGLDLEEE 56
Query: 108 VDDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRG 167
++Q LE+ VP FL A+ +YY GFC LWPLFHY T F+
Sbjct: 57 SEEQRARIEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTE-----FEDR 111
Query: 168 EWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPS 227
W++Y N+ FA+ + + P D VW+HDY LM+LP+ LR+R ++GFFLH PFPS
Sbjct: 112 FWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPS 170
Query: 228 SEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGR 287
E++R LP R+EIL+ LL +DLIGFHT+DY RHFLSS R+LG E +G GR
Sbjct: 171 FEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLG----GR 226
Query: 288 TVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLA 347
V + P+GI +F + ++++ L++ G+ +IL +D +D KGI + LA
Sbjct: 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLA 286
Query: 348 MGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVII 407
+ LE++P+ RGKV LVQ+ P+R+ Q++ + + + IN FG + PI
Sbjct: 287 FERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYF 346
Query: 408 KEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKK 467
L ++ V Y A+ +V +RDGMNLV +Y SR
Sbjct: 347 YRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT-----------------DGD 389
Query: 468 SVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527
V+I+SE G + L+ A+ VNP +++ +A A+ AL+M +E+ R + + + +DV
Sbjct: 390 GVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDV 449
Query: 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRL 587
WA +L A + F + P + I + Y + RL
Sbjct: 450 HKWASDFLDELREA-AEKNKA----------FASKPITPAAAEE----IIARYRAASRRL 494
Query: 588 ILLDYDGTVMP--QTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK 645
+LLDYDGT++P E P E+ +L L DP V I+SGR +D+L WF +
Sbjct: 495 LLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-P 553
Query: 646 LGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWH 705
+ L AEHG ++R + W++ +WK+ P+++ + + T GSFIE+KE ++ WH
Sbjct: 554 IHLVAEHGAWSR-APGGEWQL-LEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWH 611
Query: 706 HQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
+++ADP G +A EL+ L ++L+N P+ V RG +VEV+P
Sbjct: 612 YRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPA 654
|
Length = 726 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 467 bits (1203), Expect = e-154
Identities = 253/711 (35%), Positives = 383/711 (53%), Gaps = 61/711 (8%)
Query: 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDD 110
R ++VAN+LPV A + W E L L ET+ ++G V++ +
Sbjct: 11 PRLLVVANRLPVSAK-RTGEDSWSLEMSPGGLVSALLGVKEFETK--WIGWPGVDVHDEI 67
Query: 111 QEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYM-LPLTASHGA-RFDRGE 168
+ T L + C+P FL +V +YY+G+C + LWP+FHYM LP H A R +
Sbjct: 68 GKAALTESLAEKGCIPVFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQ 126
Query: 169 WQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS 228
+ AY AN++F D V E + D VW HDYHLM LP +L++ +++KVG+FLH+PFPSS
Sbjct: 127 YDAYKKANRMFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSS 185
Query: 229 EIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT 288
EIY+TLP R E+L+++L +DLIGFHT+D+ARHFLS+C+R+LG+ + G+ G+
Sbjct: 186 EIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVDQGKV 241
Query: 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAM 348
+ + P+GI +F + L Q +KELK F G+ VILGVD +D+ KGI K+LA
Sbjct: 242 TRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAF 301
Query: 349 GQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIK 408
+ LE++P+ R KV+LVQI P R+ + Q L S + + IN FG PI +
Sbjct: 302 EKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLD 361
Query: 409 EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKS 468
+ YAI + +V +RDGMNLV Y++ ++ KK
Sbjct: 362 CSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKA-----------------KKG 404
Query: 469 VIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527
V+++SEF G SL +GA+ VNPWN+ V+ A+ AL M ++E+ RH +++Y+ +H
Sbjct: 405 VLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSA 464
Query: 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRL 587
WA +L + R + E L + Y+K+N+RL
Sbjct: 465 QKWADDFMSELNDIIVEA------------ELRTRNIPLE---LPEQDVIQQYSKSNNRL 509
Query: 588 ILLDYDGTVM-PQTSEDKRPS----TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642
++L + GT+ P+ S+ K E+ L LC+DPK V ++S GKD L F G
Sbjct: 510 LILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNF-G 568
Query: 643 VEKLGLSAEHGYFTR-----WSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIED 697
+ L+AE+G F R W + + DW + + V K +T+ T S++E
Sbjct: 569 EYNIWLAAENGMFLRHTSGEWVTTMPEHM-----NLDWVDGVKNVFKYFTDRTPRSYVEK 623
Query: 698 KETAIVWHHQHADPHFGSCQAKELLDHL-ENVLANEPVVVKRGQHIVEVKP 747
ET++VW++++AD FG QA+++L HL ++N V V RGQ VEV
Sbjct: 624 SETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHA 674
|
Length = 797 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 469 bits (1209), Expect = e-153
Identities = 258/723 (35%), Positives = 390/723 (53%), Gaps = 78/723 (10%)
Query: 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSL---YLQLKDGFPLETEVIYVG--SLNVE 105
QR ++VAN+LPV A + + W E L L +K E E ++G +NV
Sbjct: 94 QRLLVVANRLPVSAV-RRGEDSWSLEISAGGLVSALLGVK-----EFEARWIGWAGVNVP 147
Query: 106 IGVDDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYM-------LPLTA 158
V Q+ ++ L EK +C+P FL ++ +YY+G+C + LWPLFHY+ L T
Sbjct: 148 DEVG-QKALTKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTR 205
Query: 159 SHGARFDRGEWQAYLSANKVFADKVMEVINPDE-DYVWIHDYHLMVLPSFLRKRFHRVKV 217
S ++F AY AN++FAD V E + +E D VW HDYHLM LP L++ +KV
Sbjct: 206 SFQSQFA-----AYKKANQMFADVVNE--HYEEGDVVWCHDYHLMFLPKCLKEYNSNMKV 258
Query: 218 GFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKR 277
G+FLH+PFPSSEI+RTLP R E+L+S+L +DL+GFHT+DYARHF+S+C+R+LGL +
Sbjct: 259 GWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE- 317
Query: 278 GYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337
G++ GR + P+GI +F + Q +KELKE+F G+ V+LGVD +D+
Sbjct: 318 ---GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDM 374
Query: 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFG 397
KGI K LA + LE++P+ R KVVL+QI P R+ + Q L S + I IN FG
Sbjct: 375 IKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFG 434
Query: 398 KPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALG 457
PI + L YA+ + +V +RDGMNLV Y++ V+ Q S
Sbjct: 435 TLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEF-VACQDS-------- 485
Query: 458 VDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHE 516
KK V+I+SEF G + SL +GAI VNPWN+ VA ++ AL M +E+ RH
Sbjct: 486 --------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHR 537
Query: 517 KHYKYISSHDVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHI 576
++ ++++H WA++ +L + R + P+ L
Sbjct: 538 HNFMHVTTHTAQEWAETFVSELNDTVVEAQ------------LRTRQVPPQ---LPPEDA 582
Query: 577 ASAYNKTNSRLILLDYDGTV-MPQTSEDKRPST----------EVLSILNDLCNDPKNAV 625
Y ++N+RL++L ++ T+ P + +R E+ L LC+DPK +
Sbjct: 583 IQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTI 642
Query: 626 FIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKL 685
++SG + L F G + L+AE+G F R +K + DW + + V +
Sbjct: 643 VVLSGSDRSVLDENF-GEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEY 701
Query: 686 YTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHL-ENVLANEPVVVKRGQHIVE 744
+TE T S E +ET++VW++++AD FG QA+++L HL ++N V V +G VE
Sbjct: 702 FTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVE 761
Query: 745 VKP 747
V+P
Sbjct: 762 VRP 764
|
Length = 934 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 425 bits (1096), Expect = e-142
Identities = 184/492 (37%), Positives = 266/492 (54%), Gaps = 27/492 (5%)
Query: 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDD 110
R I+V+N+LPVK E D + L LK ++G D+
Sbjct: 15 SRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALK-PLLRVDGGTWIGWSGTTGPTDE 73
Query: 111 QEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQ 170
+ + +F P L + ++ YY+GF LWPLFHY + A ++R W
Sbjct: 74 SSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVA-----YERNWWD 128
Query: 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEI 230
AY+ N+ FADK++E+ P D +W+HDYHL+++P LR+R K+GFFLH PFPSSE+
Sbjct: 129 AYVKVNRKFADKIVEIYEPG-DIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEV 187
Query: 231 YRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290
+R LP R+EIL+ LL +DLIGF T YAR+FL CSR+LG+ ++ + G D GR V
Sbjct: 188 FRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGAD--GRIVK 245
Query: 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMG 349
+ P+GI +FE + +KV ELK + K +I+GVD +D KGI + LA
Sbjct: 246 VGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFE 305
Query: 350 QLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKE 409
+LLE++P+ RGKVVL+QI P+R ++ Q L + IN FG + P+ +
Sbjct: 306 RLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHR 365
Query: 410 PLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSV 469
L + + Y A+ +V +RDGMNLV +Y +++ K V
Sbjct: 366 DLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQR-----------------DKPGV 408
Query: 470 IIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAY 529
+I+SEF G + L A+ VNPW+ VADA+ AL M +E+ RHEK K + +HDVA
Sbjct: 409 LILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVAR 468
Query: 530 WAKSIDQDLERA 541
WA S DL +A
Sbjct: 469 WANSFLDDLAQA 480
|
Length = 486 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 422 bits (1088), Expect = e-141
Identities = 180/490 (36%), Positives = 260/490 (53%), Gaps = 35/490 (7%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEI-GVDD 110
R I+V+N+LPV G E L + L G T ++ G + +
Sbjct: 1 RLIVVSNRLPVPITRG------GLEPSAGGLAVALL-GALKATGGVWFGWSGKTVEEDEG 53
Query: 111 QEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQ 170
+ + T L K P FL + YY+GF LWPLFHY L R+DR W+
Sbjct: 54 EPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWE 108
Query: 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEI 230
AY N++FA+ + ++ P D VW+HDYHLM+LP+ LR+ + K+GFFLH PFPSSEI
Sbjct: 109 AYRRVNRLFAEALAPLLQPG-DIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEI 167
Query: 231 YRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290
YRTLP R E+L+ LL DL+GF T+D AR+FLS+ SR LGL G++ GRTV
Sbjct: 168 YRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223
Query: 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350
+ P+GI + +F +++ EL+E G+ +I+GVD +D KG+ + LA +
Sbjct: 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFER 283
Query: 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410
LE+HP+ RGKVVLVQI P+R + Q L + IN FG + PI +
Sbjct: 284 FLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRS 343
Query: 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470
++ + Y A+ +V +RDGMNLV +Y V ++P K V+
Sbjct: 344 YDREELMALYRAADVGLVTPLRDGMNLVAKEY---------------VAAQDP--KDGVL 386
Query: 471 IVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530
I+SEF G + L+GA+ VNP+++D +ADA+ AL M +E+ RH + +DV W
Sbjct: 387 ILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRW 446
Query: 531 AKSIDQDLER 540
+ DL
Sbjct: 447 REDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 223 bits (569), Expect = 7e-65
Identities = 137/444 (30%), Positives = 220/444 (49%), Gaps = 39/444 (8%)
Query: 103 NVEIGVDDQE----EVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTA 158
+ E G +DQ + I F L + +YY+ F LWP FHY L L
Sbjct: 43 SGETGNEDQPLKKVKKGNITWASFN-----LSEQDYDEYYNQFSNAVLWPAFHYRLDLV- 96
Query: 159 SHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVG 218
+F R W+ YL N + ADK++ ++ D D +WIHDYHL+ S LRKR ++G
Sbjct: 97 ----QFQRPAWEGYLRVNALLADKLLPLLKDD-DIIWIHDYHLLPFASELRKRGVNNRIG 151
Query: 219 FFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRG 278
FFLH PFP+ EI+ LP DE+L+ L + DL+GF T + FL S + + S +
Sbjct: 152 FFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKS 211
Query: 279 YIGLDYFGRTVSIKILPVGIHMGQFESI--MSLDVTGQKVKELKEKFDGKIVILGVDDMD 336
+ +G+ ++ P+GI + + I + K+ +LK + I V+ +D
Sbjct: 212 HTA---WGKAFRTEVYPIGI---EPDEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLD 265
Query: 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNF 396
KG+ +FLA LLE++P GK+ QI +R + QD+ A IN +
Sbjct: 266 YSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKY 325
Query: 397 GKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRAL 456
G+ G+ P+ + + + + + ++ +V +RDGMNLV +Y ++
Sbjct: 326 GQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ---------- 375
Query: 457 GVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHE 516
D NP V+++S+F G + L+ A+ VNP++ D VA A+D AL M E+I RH
Sbjct: 376 --DPANP----GVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHA 429
Query: 517 KHYKYISSHDVAYWAKSIDQDLER 540
+ I +D+ +W + DL++
Sbjct: 430 EMLDVIVKNDINHWQECFISDLKQ 453
|
Length = 474 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 205 bits (524), Expect = 3e-61
Identities = 74/163 (45%), Positives = 102/163 (62%), Gaps = 4/163 (2%)
Query: 589 LLDYDGTVMPQ--TSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKL 646
LDYDGT+ P + PS +LS+LN L +DP N V I+SGR + + F GV L
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFE-DLFFGVPNL 59
Query: 647 GLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHH 706
GL+AEHG F R W + D DWK+ +++ YTE T GS+IEDK++A+ WH+
Sbjct: 60 GLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDKKSALAWHY 119
Query: 707 QHADPHFGSCQAKELLDHLENVLANEP-VVVKRGQHIVEVKPQ 748
++AD FG QAKEL +HLE+VL + P V V +G+ +VEV+P
Sbjct: 120 RNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPV 162
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 212 bits (542), Expect = 6e-61
Identities = 115/421 (27%), Positives = 197/421 (46%), Gaps = 42/421 (9%)
Query: 129 LPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVIN 188
L + +YH K WP+ H T +F +WQ +L N+ FA+
Sbjct: 77 LSKEQVDIFYHITSKEAFWPILH-----TFPERFQFREDDWQVFLKVNRAFAEAACL--E 129
Query: 189 PDED-YVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNS 247
E VW+HDY+L ++P ++R+ +K+ FF H+PFPS++++ LP R++I+ SLL
Sbjct: 130 AAEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCC 189
Query: 248 DLIGFHTFDYARHFLSSCSRMLGLNYESK-----------------RGYIGLDYFGRTVS 290
D IGFH Y +F+ + ++ L S+ R LD R V
Sbjct: 190 DYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVK 249
Query: 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350
+ PVG + S ++ + ++ ++ + G +IL + +D KGI K A +
Sbjct: 250 LGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYER 309
Query: 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410
LLE+ P+L GKV LV PA S +L + IN F + G+ P+
Sbjct: 310 LLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRS 369
Query: 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470
L ++ ++A+A+ + +RDG+NLV +Y ++ G+ + V+
Sbjct: 370 LPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQ----------GLLD-------GVL 412
Query: 471 IVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530
++SEF G + L GA+ NP++ + + + AL M E+ R + + ++ +DV W
Sbjct: 413 VLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRW 472
Query: 531 A 531
A
Sbjct: 473 A 473
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 7e-34
Identities = 60/179 (33%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 571 LGMHHIASAYNKTNSRLILLDYDGTVMP--QTSEDKRPSTEVLSILNDLCNDPKNAVFIV 628
L + + Y RL+ LDYDGT+ E P +LS+L DL +DP+N V I+
Sbjct: 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAII 63
Query: 629 SGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTE 688
SGR L F GV +GL AEHG R W + D W + +++ Y E
Sbjct: 64 SGRSLAELERLF-GVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVE 122
Query: 689 TTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKP 747
T GS+IE K A+ H+++A+ G+ A L N L + V G+ +VE++P
Sbjct: 123 RTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELK---LRVTPGKMVVELRP 178
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 75.6 bits (186), Expect = 3e-15
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 30/176 (17%)
Query: 586 RLILLDYDGTVMP--QTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG---KDSLGNWF 640
R DYDGT+ + S +L+IL L P NA++I+SGR K
Sbjct: 4 RAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV--- 60
Query: 641 SGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFD--------WKEIAEPVMKLYTETTDG 692
+ LGL+ EHG + + + +D+ WK A + + T G
Sbjct: 61 -KLPGLGLAGEHGCEMKDNGS--------CQDWVNLTEKIPSWKVRANELREEITT-RPG 110
Query: 693 SFIEDKETAIVWHHQHA-DPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKP 747
FIE K A+ WH++ A P +AKEL E +L+ + V G+ +VE+KP
Sbjct: 111 VFIERKGVALAWHYRQAPVPELARFRAKEL---KEKILSFTDLEVMDGKAVVELKP 163
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 1e-08
Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 8/124 (6%)
Query: 587 LILLDYDGT-VMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK 645
L+ D DGT + P E S E + L L V +V+GR + +
Sbjct: 1 LLFFDLDGTLLDPNAHE---LSPETIEALERLREAG-VKVVLVTGRSLAEIKELLKQL-P 55
Query: 646 LGLSAEHGYFTRWSKNSAWEICSLTRDFD--WKEIAEPVMKLYTETTDGSFIEDKETAIV 703
L L AE+G + + S + KE +K +E G+FIEDK A+
Sbjct: 56 LPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVA 115
Query: 704 WHHQ 707
H+
Sbjct: 116 IHYV 119
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 45.7 bits (107), Expect = 7e-05
Identities = 58/358 (16%), Positives = 115/358 (32%), Gaps = 61/358 (17%)
Query: 190 DEDYVWIHD--YHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNS 247
D + H L + L + + + LH P + L +
Sbjct: 83 PYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLL--------- 133
Query: 248 DLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIM 307
G R + + S L+ G I ++P GI +F
Sbjct: 134 ---GLLRLLLKRLKKALRLLADRVIAVSPALKELLEALGVPNKIVVIPNGIDTEKF---- 186
Query: 308 SLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQI 367
+ GK V+L V +D KG+ L A +L ++ PD++ +V
Sbjct: 187 ------APARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIV---- 236
Query: 368 TNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCV 427
D + + ++A+++ L E V + ++ A A+ V
Sbjct: 237 --------GDGPERREELEKLAKKLGL-------EDNVKFLGYVPDEELAELLASADVFV 281
Query: 428 VNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIR 487
+ + +G LV + G+PV+ +G + E + + +
Sbjct: 282 LPSLSEGFGLVLLEA--MAAGTPVIASDVGG-------------IPEVVEDGET---GLL 323
Query: 488 VNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDH 545
V P +V+ +ADA++ L+ + L + A+ + + E +
Sbjct: 324 VPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLAEK 381
|
Length = 381 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 755 | |||
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.96 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.95 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.94 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.94 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.93 | |
| PLN02316 | 1036 | synthase/transferase | 99.93 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.93 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.93 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.92 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.92 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.92 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.92 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.91 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.91 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.91 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.91 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.91 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.91 | |
| PLN00142 | 815 | sucrose synthase | 99.9 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.9 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.9 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.9 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.9 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.9 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.89 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.89 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.88 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.88 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.87 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.87 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.87 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.86 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.86 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.86 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.86 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.85 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.85 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.85 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.85 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.85 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.85 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.84 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.84 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.84 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.84 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.83 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.83 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.83 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.83 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.83 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.82 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.82 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.82 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.82 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.81 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.81 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.8 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.8 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.8 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.8 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.79 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.79 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.79 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.78 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.77 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.76 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.75 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.75 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.74 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.74 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.71 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.71 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.71 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.67 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.64 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.55 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.53 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.47 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.47 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.46 | |
| PLN02423 | 245 | phosphomannomutase | 99.44 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.41 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.4 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.36 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.34 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.34 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.29 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.29 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.28 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.28 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.28 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.28 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.26 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.24 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.23 | |
| PLN02887 | 580 | hydrolase family protein | 99.21 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.21 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.2 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.19 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.19 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.16 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.16 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.14 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.12 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.12 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.12 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.12 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.09 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.04 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.03 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.0 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.92 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.92 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 98.87 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.86 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 98.84 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.83 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.81 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 98.76 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.69 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.44 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 98.26 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.24 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.24 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.14 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 97.94 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 97.87 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.84 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 97.64 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.51 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.33 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.06 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.67 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.65 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.64 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 96.63 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.57 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.49 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.38 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 96.33 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 96.32 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 96.25 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.12 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 96.0 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.99 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 95.97 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.95 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 95.25 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 94.93 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 94.83 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.41 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.35 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 94.28 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 94.02 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.0 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 93.72 | |
| PRK06769 | 173 | hypothetical protein; Validated | 93.71 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 93.71 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 93.7 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 93.66 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 93.6 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.45 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 92.66 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 92.57 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 92.55 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 92.48 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 92.2 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 92.09 | |
| PLN02954 | 224 | phosphoserine phosphatase | 92.07 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 92.05 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.92 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 91.83 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 91.58 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 91.47 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 91.35 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 91.31 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 91.2 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 90.69 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 90.65 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 90.65 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 90.6 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 90.44 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 90.44 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 90.36 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 90.18 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 90.0 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 88.55 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 88.32 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 88.22 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 87.96 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 87.18 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 86.93 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 86.0 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 85.94 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 85.33 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 85.07 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 84.8 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 84.38 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 84.29 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 84.27 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 84.11 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 82.82 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 82.57 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 82.2 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 81.94 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 81.94 | |
| PLN02940 | 382 | riboflavin kinase | 81.39 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 80.96 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 80.38 |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-174 Score=1541.26 Aligned_cols=751 Identities=65% Similarity=1.135 Sum_probs=705.7
Q ss_pred ccccccccccc--cCCCCcc-CCCccccccCccccccccCC-CCCC---CCCCCCCCcEEEEEcCCccceeEeCCC-Cce
Q 004411 2 RSSLDLLNLIS--FDDFGTL-NRIPGVMKVPGVISEFENKS-NDGT---TTIVEPCQRRIIVANQLPVKAYYEKDS-NKW 73 (755)
Q Consensus 2 ~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~iivsnrlP~~~~~~~~~-~~~ 73 (755)
|||+|||||++ +..++++ +++|++|++||+++++++++ ++.+ +++..+.+|+||||||||+.++++++| ++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~~~~ 83 (854)
T PLN02205 4 RSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGSKGW 83 (854)
T ss_pred hhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCCcce
Confidence 79999999999 5677766 99999999999999999876 2222 446777789999999999999987544 589
Q ss_pred EEEecCCchhHhhhhcCCC-CCCeEEEecCCCccCCcchhhHHHhhhcCeeEEEEeCChHhHhhHhhccccccccccccc
Q 004411 74 GFEYDQDSLYLQLKDGFPL-ETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHY 152 (755)
Q Consensus 74 ~~~~~~~~l~~~l~~~l~~-~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~Lwpl~H~ 152 (755)
+|++++|||+++|++++.. ..+++||||+|.++++++++++.+.++++|+|+|||++++++++||+||||++|||+|||
T Consensus 84 ~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPlfH~ 163 (854)
T PLN02205 84 IFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHY 163 (854)
T ss_pred EEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccchhcc
Confidence 9999999999999988854 378999999998888888888878888899999999999999999999999999999999
Q ss_pred cCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhh
Q 004411 153 MLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR 232 (755)
Q Consensus 153 ~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r 232 (755)
+++..|+++.+|+++.|++|++||++||++|+++++|++|+|||||||||+||+|||+++|+++||||||||||++|+||
T Consensus 164 ~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr 243 (854)
T PLN02205 164 MLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK 243 (854)
T ss_pred CCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHh
Confidence 98887877779999999999999999999999999986799999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchh
Q 004411 233 TLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVT 312 (755)
Q Consensus 233 ~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~ 312 (755)
+||+|++||+|||+||+|||||++|++||++||+|++|+++..++|.+++.|+||+++|+++|+|||++.|...+..+++
T Consensus 244 ~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~ 323 (854)
T PLN02205 244 TLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPET 323 (854)
T ss_pred hCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhH
Confidence 99999999999999999999999999999999999999999888888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHcC--CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHH
Q 004411 313 GQKVKELKEKFD--GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAE 390 (755)
Q Consensus 313 ~~~~~~lr~~~~--~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~ 390 (755)
.+++++++++++ |+++|+||||||++|||.+||+||++||++||+|+|||+||||++|+|+++++|++++++++++|+
T Consensus 324 ~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~ 403 (854)
T PLN02205 324 EAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVK 403 (854)
T ss_pred HHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHH
Confidence 999999999995 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceE
Q 004411 391 EINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470 (755)
Q Consensus 391 ~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~l 470 (755)
+||++||+.+|+||+|+.+.++++|+.|||++||||++||+|||||||++||+||+++.+.++++++.++.+ +++|+|
T Consensus 404 rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~--~~~gvL 481 (854)
T PLN02205 404 RINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPST--PKKSML 481 (854)
T ss_pred HHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCcccccccccccccc--CCCCce
Confidence 999999999999999999999999999999999999999999999999999999999876666666655543 468999
Q ss_pred EEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHHHHhcccccc
Q 004411 471 IVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDHLFKRC 550 (755)
Q Consensus 471 V~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~ 550 (755)
|+|||+||+++|++|++|||||++++|+||++||+||++||+.||++++++|++||+.+|+++||++|+++++++..++|
T Consensus 482 iLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~ 561 (854)
T PLN02205 482 VVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRC 561 (854)
T ss_pred EeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888899
Q ss_pred cccCCCcceeEeecCccccccChHHHHHHhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC
Q 004411 551 WGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG 630 (755)
Q Consensus 551 ~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG 630 (755)
|++|+|++||+++++++|++|+++.++++|+++++|+|++||||||+|..+....|+++++++|++|++++++.|+|+||
T Consensus 562 ~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSG 641 (854)
T PLN02205 562 WGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSA 641 (854)
T ss_pred cccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999977556789999999999999999999999999
Q ss_pred CChhhHHhhhcCCCCceEEcCCceEEEecCCCceeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCC
Q 004411 631 RGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHAD 710 (755)
Q Consensus 631 R~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad 710 (755)
|+++.|++||+++++++++||||++++++++..|+......+..|++.++++|+.|++++||++||.|+++++||||++|
T Consensus 642 R~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~ad 721 (854)
T PLN02205 642 RSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDAD 721 (854)
T ss_pred CCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCC
Confidence 99999999999987899999999999998776897654445678999999999999999999999999999999999999
Q ss_pred CCcchhhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 711 PHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 711 ~~~~~~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
|+++..|++++.+++++.+.+.++.|.+|+++|||+|+|+|||+
T Consensus 722 pd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~ 765 (854)
T PLN02205 722 PDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGL 765 (854)
T ss_pred hHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHH
Confidence 99999999999999999988888899999999999999999995
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-151 Score=1335.71 Aligned_cols=662 Identities=37% Similarity=0.665 Sum_probs=604.7
Q ss_pred CCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCc-chhhHHHhhhcCeeEEEEe
Q 004411 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVPTF 128 (755)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~-~~~~~~~~~~~~~~~~pv~ 128 (755)
++||||||||||+.++++++ |.|+++++.|||+++|.+ + +..+++||||+|..++.+ +++.+.+ .+.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~-g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~-~l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTK-ALAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecCC-CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHH-HhccCceEEEe
Confidence 78999999999999988654 589999999999999975 5 468999999999876653 4454544 45789999999
Q ss_pred CChHhHhhHhhccccccccccccccC-cCCC-CCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHH
Q 004411 129 LPADVHKKYYHGFCKHYLWPLFHYML-PLTA-SHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPS 206 (755)
Q Consensus 129 l~~~~~~~~y~gf~~~~Lwpl~H~~~-~~~~-~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~ 206 (755)
|+++++++||+||||++|||+|||+. +..+ ....+|+.++|++|++||++||++|+++++| +|+|||||||||+||+
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~LlP~ 247 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFLPK 247 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHH
Confidence 99999999999999999999999973 2111 0124688899999999999999999999987 5999999999999999
Q ss_pred HHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcC
Q 004411 207 FLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFG 286 (755)
Q Consensus 207 ~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~g 286 (755)
|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|++... .++.++|
T Consensus 248 ~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~G 323 (934)
T PLN03064 248 CLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQG 323 (934)
T ss_pred HHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999988543 2488999
Q ss_pred eEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEE
Q 004411 287 RTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (755)
Q Consensus 287 r~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (755)
|.++|.++|+|||++.|...+..+++.+++++++++++++++|+||||||+.|||.+||+||++||++||+|++||||||
T Consensus 324 r~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQ 403 (934)
T PLN03064 324 RLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQ 403 (934)
T ss_pred EEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999999888999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 367 i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
|+.|+|+++++|++++.++.++|++||++||+.+|+||+|+.+.++++|+.|+|++|||||+||+|||||||++||||||
T Consensus 404 Ia~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 404 IAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhc
Q 004411 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (755)
. +++|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+|
T Consensus 484 ~-----------------~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~ 546 (934)
T PLN03064 484 D-----------------SKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTH 546 (934)
T ss_pred c-----------------CCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccC
Confidence 7 357899999999999999 4899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccChHHHHHHhhccCceEEEecCCCcCCCCCCC---
Q 004411 526 DVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSE--- 602 (755)
Q Consensus 526 ~~~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~--- 602 (755)
|+++|+++|+++|.++..++.. ++ .. -+.+|+.+.++++|+.+++|+|+|||||||+|+.+.
T Consensus 547 d~~~Wa~~fl~~L~~~~~~~~~-~~-----------~~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~ 611 (934)
T PLN03064 547 TAQEWAETFVSELNDTVVEAQL-RT-----------RQ---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGR 611 (934)
T ss_pred CHHHHHHHHHHHHHHHHhhhhc-cc-----------cc---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCccc
Confidence 9999999999999988654321 11 01 124799999999999999999999999999997532
Q ss_pred --------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCCceeE-cccCcCc
Q 004411 603 --------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEI-CSLTRDF 673 (755)
Q Consensus 603 --------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~-~~~~~~~ 673 (755)
...|+++++++|++|++|++|.|+|+|||+.+.|++||+.+ +++++||||++++.+ +..|.+ +.+..+.
T Consensus 612 ~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~-~~~w~~~~~~~~~~ 689 (934)
T PLN03064 612 RGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHT-KGEWMTTMPEHLNM 689 (934)
T ss_pred ccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecC-CCcceeccccccch
Confidence 44688999999999999999999999999999999999987 799999999999987 458973 3334467
Q ss_pred cHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHH-HHHhcCCCeEEEecCeEEEEEeCCCCC
Q 004411 674 DWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHL-ENVLANEPVVVKRGQHIVEVKPQVCQH 752 (755)
Q Consensus 674 ~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L-~~~l~~~~~~V~sG~~~VEV~p~gvnK 752 (755)
+|++.+.++|++|+++|||++||.|+++++||||++||+++..||+++.++| +..+.+.++.|+.|+++|||+|.|+||
T Consensus 690 ~W~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnK 769 (934)
T PLN03064 690 DWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTK 769 (934)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCH
Confidence 8999999999999999999999999999999999999999999999999999 445567789999999999999999999
Q ss_pred CC
Q 004411 753 QS 754 (755)
Q Consensus 753 G~ 754 (755)
|+
T Consensus 770 G~ 771 (934)
T PLN03064 770 GA 771 (934)
T ss_pred HH
Confidence 95
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-143 Score=1272.96 Aligned_cols=663 Identities=37% Similarity=0.672 Sum_probs=599.5
Q ss_pred CCCCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCc-chhhHHHhhhcCeeEEE
Q 004411 48 EPCQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVP 126 (755)
Q Consensus 48 ~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~-~~~~~~~~~~~~~~~~p 126 (755)
...+||||||||||+.+++++ +|+|++++++|||+++|.+ +. ..+++||||+|.+++++ ++..+ ...+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~-~~~~~~~~~~ggl~~al~~-~~-~~~~~Wvgw~g~~~~~~~~~~~~-~~~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTG-EDSWSLEMSPGGLVSALLG-VK-EFETKWIGWPGVDVHDEIGKAAL-TESLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecC-CCceEEeeCCCCHHHHHHH-HH-hcCceEEEeCCCcCCcccchhHH-HHHhhcCCeEE
Confidence 467899999999999888764 3689999999999999986 44 47999999999876544 33333 34457899999
Q ss_pred EeCChHhHhhHhhcccccccccccccc-CcCCCC-CCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchH
Q 004411 127 TFLPADVHKKYYHGFCKHYLWPLFHYM-LPLTAS-HGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVL 204 (755)
Q Consensus 127 v~l~~~~~~~~y~gf~~~~Lwpl~H~~-~~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~ll 204 (755)
||| ++++++||+||||++|||+|||+ .+..+. ...+|+++.|++|++||++||++|++++++ +|+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhhH
Confidence 999 99999999999999999999997 222221 114566789999999999999999999987 49999999999999
Q ss_pred HHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEE
Q 004411 205 PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDY 284 (755)
Q Consensus 205 p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~ 284 (755)
|+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++... .+.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999875432 3779
Q ss_pred cCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEE
Q 004411 285 FGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVL 364 (755)
Q Consensus 285 ~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvL 364 (755)
+|+.++|.++|+|||++.|.+....+++.+...+++++++++++|++|||||+.|||.++|+||++||+++|+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999998877667677777788888999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeee
Q 004411 365 VQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTV 444 (755)
Q Consensus 365 vqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a 444 (755)
|||++|+|+++++|+++++++++++++||.+||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh
Q 004411 445 SRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS 523 (755)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 523 (755)
||. +++|++|+|||+|++++++ +|++|||||++++|+||.++|+|+++||+.|+++++++|+
T Consensus 398 ~g~-----------------p~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~ 460 (797)
T PLN03063 398 CQK-----------------AKKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVK 460 (797)
T ss_pred eec-----------------CCCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhh
Confidence 987 3468999999999999994 8999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccChHHHHHHhhccCceEEEecCCCcCCCCCC--
Q 004411 524 SHDVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS-- 601 (755)
Q Consensus 524 ~~~~~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~-- 601 (755)
+||+.+|+++|+++|.++++.+.... ...+.+|+.+.+.++|++|++|+|+|||||||++..+
T Consensus 461 ~~~~~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~ 525 (797)
T PLN03063 461 THSAQKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQ 525 (797)
T ss_pred hCCHHHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCc
Confidence 99999999999999999887542210 1234479999999999999999999999999998754
Q ss_pred ---CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCCceeEcc-cCcCccHHH
Q 004411 602 ---EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICS-LTRDFDWKE 677 (755)
Q Consensus 602 ---~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~~~-~~~~~~w~~ 677 (755)
....|+++++++|++|+++++|.|+|+|||+.+.|++||+++ +++++||||++++.+ ++.|.... ...+.+|++
T Consensus 526 ~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~ 603 (797)
T PLN03063 526 IKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVD 603 (797)
T ss_pred cccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHH
Confidence 346789999999999999999999999999999999999975 699999999999976 45898543 234678999
Q ss_pred HHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHH-HhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 678 IAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLEN-VLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 678 ~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~-~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
.+.++|+.|++++||++||+|+++++||||++||+++..||+++.++|.+ .+.+.++.|+.|+++|||+|+|+|||+
T Consensus 604 ~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~ 681 (797)
T PLN03063 604 GVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGA 681 (797)
T ss_pred HHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHH
Confidence 99999999999999999999999999999999999999999999999944 556668999999999999999999995
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-132 Score=1186.55 Aligned_cols=655 Identities=35% Similarity=0.658 Sum_probs=598.1
Q ss_pred CcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCC---cchhhHHHhhhcCeeEEEE
Q 004411 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGV---DDQEEVSTILLEKFKCVPT 127 (755)
Q Consensus 51 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~---~~~~~~~~~~~~~~~~~pv 127 (755)
+||||||||||+.+++++ |+|++++++|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999988654 479999999999999987665 4799999999976543 2223233 45678999999
Q ss_pred eCChHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHH
Q 004411 128 FLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSF 207 (755)
Q Consensus 128 ~l~~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~ 207 (755)
||+++++++||+||||++|||+|||+.+. ..|++++|++|++||++||++|++.++++ |+|||||||||+||++
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHHHH
Confidence 99999999999999999999999999776 57999999999999999999999999974 9999999999999999
Q ss_pred HHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCe
Q 004411 208 LRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGR 287 (755)
Q Consensus 208 lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr 287 (755)
||++.|+++||||||+|||++|+|++||+|++||+|||+||+|||||++|++||++||++++++++.. ..+.+.||
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~----~~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETEL----GEIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCC----CeEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999987532 24789999
Q ss_pred EEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 004411 288 TVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQI 367 (755)
Q Consensus 288 ~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 367 (755)
.++|.++|+|||++.|.+....+++.+..+++|+.++++++|++|||+++.||+..+|+||++|++++|+++|+++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999887767777777788888899999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeeccc
Q 004411 368 TNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (755)
Q Consensus 368 ~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 447 (755)
+.|+|.+.++|+++++++.+++++||++||..+|.||+++.+.++++|++++|++|||||+||++||||||++||||||.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99999877999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCH
Q 004411 448 GSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527 (755)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 527 (755)
+ ++|++|+|+++|+++++.+|++|||||++++|+||.++|+|+.+|++.|+++++++|.+||+
T Consensus 387 ~-----------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~ 449 (726)
T PRK14501 387 D-----------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDV 449 (726)
T ss_pred C-----------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCH
Confidence 3 46899999999999999899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccChHHHHHHhhccCceEEEecCCCcCCCCC--CCCCC
Q 004411 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQT--SEDKR 605 (755)
Q Consensus 528 ~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~--~~~~~ 605 (755)
..|+++|++++.++++.+... . ...++.|+.+.+.++|+.+++|+|++||||||++.. +....
T Consensus 450 ~~w~~~~l~~l~~~~~~~~~~-----------~----~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~ 514 (726)
T PRK14501 450 HKWASDFLDELREAAEKNKAF-----------A----SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAV 514 (726)
T ss_pred HHHHHHHHHHHHHHHhhhhcc-----------c----cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCC
Confidence 999999999999987765321 0 123567899999999999999999999999999854 24567
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCCceeEcccCcCccHHHHHHHHHHH
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKL 685 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~ 685 (755)
|+++++++|++|++++++.|+|+|||++..|+++|+.++ +++|||||++++.+ ++.|.... ..+..|++.+.++++.
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~-l~liaenG~~i~~~-~~~w~~~~-~~~~~w~~~v~~il~~ 591 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLP-IHLVAEHGAWSRAP-GGEWQLLE-PVATEWKDAVRPILEE 591 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCC-eEEEEeCCEEEeCC-CCceEECC-CcchhHHHHHHHHHHH
Confidence 899999999999998999999999999999999998764 89999999999876 45787643 2367899999999999
Q ss_pred HhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 686 YTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 686 y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
|.++++|+++|+|+.+++|||++++++++..+++++.++++..+.+.++.+++|+++|||+|+++|||+
T Consensus 592 ~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~ 660 (726)
T PRK14501 592 FVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGR 660 (726)
T ss_pred HHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHH
Confidence 999999999999999999999999999998899999999999888888999999999999999999985
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-123 Score=1065.38 Aligned_cols=657 Identities=52% Similarity=0.905 Sum_probs=620.5
Q ss_pred CCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCcchhhHHHhhhcCeeEEEEeC
Q 004411 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFL 129 (755)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 129 (755)
..|+|+|||+||+.+.+..+++.|.|+++.+||+.++.+++. .++..||||++.++++++++.+.+.++..++|+||++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 569999999999998766667799999999999999988766 5889999999988888999999999999999999999
Q ss_pred ChHhHhhHhhcccccccccccccc-CcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHH
Q 004411 130 PADVHKKYYHGFCKHYLWPLFHYM-LPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFL 208 (755)
Q Consensus 130 ~~~~~~~~y~gf~~~~Lwpl~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~l 208 (755)
+++...++|++|||++|||+|||+ .+..+... .|+.+.|.+|+.+|+.||++++++++ ++|+|||||||||++|+++
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999998 56655543 67889999999999999999999999 5799999999999999999
Q ss_pred HhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeE
Q 004411 209 RKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT 288 (755)
Q Consensus 209 r~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~ 288 (755)
|++..+++||||+|+|||++|+|||+|.|++||++|+++|+|||||++|+|||++||.|+++++..++.+...+.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999888777889999999
Q ss_pred EEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 004411 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQIT 368 (755)
Q Consensus 289 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 368 (755)
+.|.++|+|||+.+|......+.+..+..+++..++|+++|++|||+|+.||+.+++.||+++|++||+++++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccC
Q 004411 369 NPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQG 448 (755)
Q Consensus 369 ~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~ 448 (755)
.|++++++++++++.++..++++||++||+..++||+++...++..++.|+|.+||||++++++|||||+++||++|+++
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred CCccccccCCCCCCCCCCCceEEEeCCCCccccc-CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCH
Q 004411 449 SPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527 (755)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 527 (755)
+.+++|+|||+|+++++ +++++|||||.+++|.+|..+|+|+.+|+..|+.++++++..|+.
T Consensus 399 -----------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~ 461 (732)
T KOG1050|consen 399 -----------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDV 461 (732)
T ss_pred -----------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhH
Confidence 46899999999999999 689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccChHHHHHHhhccCceEEEecCCCcCCCCCCCCCCCC
Q 004411 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPS 607 (755)
Q Consensus 528 ~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~ 607 (755)
.+|+..|++.+. ++|+.|+ +.+++..+ |+.+.+++.|+++++|+|++|||||+.+..+..
T Consensus 462 ~~W~~~~~~~l~---------~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~---- 521 (732)
T KOG1050|consen 462 VYWAKSFLQGLK---------RIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK---- 521 (732)
T ss_pred HHHHHHHHHhhh---------hhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch----
Confidence 999999998443 5677777 77776654 888999999999999999999999999854332
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCCceeEcccCcCccHHHHHHHHHHHHh
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYT 687 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ 687 (755)
++..|+.||+||+|+|+|+|||++..|++|+..++++|++||||+++|++++ |++.. .+.+|++.++++|++|+
T Consensus 522 --~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ 595 (732)
T KOG1050|consen 522 --AISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYT 595 (732)
T ss_pred --HHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999865 99875 68999999999999999
Q ss_pred cCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 688 ETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 688 ~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
++|||||+|.|+++++|||++|||++|..||+|+.++|+. .+.++.|+.|++.|||+|.|+|||.
T Consensus 596 ert~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~ 660 (732)
T KOG1050|consen 596 ERTPGSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGL 660 (732)
T ss_pred hcCCCceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHH
Confidence 9999999999999999999999999999999999999998 7889999999999999999999986
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-120 Score=999.69 Aligned_cols=456 Identities=29% Similarity=0.516 Sum_probs=419.3
Q ss_pred CCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCcchhhHHHhhhcCeeEEEEeC
Q 004411 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFL 129 (755)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 129 (755)
++||||||||+|+... + +.++|||+++|.+.+. ..+++||||+|...++ .+.+......+++|.||+|
T Consensus 1 m~rLivVSNRlp~~~~-------~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~L 68 (474)
T PRK10117 1 MSRLVVVSNRIAPPDE-------H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNE--DQPLKKVKKGNITWASFNL 68 (474)
T ss_pred CCCEEEEECCCcCCCC-------C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCC--cccchhhhcCCceEEEecC
Confidence 3699999999996321 1 3456899999998775 4799999999964322 2223333346799999999
Q ss_pred ChHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHH
Q 004411 130 PADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLR 209 (755)
Q Consensus 130 ~~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr 209 (755)
+++++++||+||||++|||+|||+.+. ..|++++|++|++||++||++|++.++| +|+|||||||||+||++||
T Consensus 69 ~~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 69 SEQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASELR 142 (474)
T ss_pred CHHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHHH
Confidence 999999999999999999999999765 5799999999999999999999999997 5999999999999999999
Q ss_pred hhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEE
Q 004411 210 KRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTV 289 (755)
Q Consensus 210 ~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~ 289 (755)
+++|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ..+.++||.+
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v 219 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAF 219 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999875322 2467889999
Q ss_pred EEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 004411 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN 369 (755)
Q Consensus 290 ~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 369 (755)
+|.++|+|||++.|...+..+ +..++++++++++++++|+|||||||+|||.++|+||++||++||+|+|||+|+||+.
T Consensus 220 ~v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~ 298 (474)
T PRK10117 220 RTEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 298 (474)
T ss_pred EEEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcC
Confidence 999999999999998877655 4667888999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCC
Q 004411 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGS 449 (755)
Q Consensus 370 p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~ 449 (755)
|+|+++++|++++++++++|++||++||+.+|+||+|+++.++++++.|+|++||||+|||+|||||||++||+|||.+
T Consensus 299 psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~- 377 (474)
T PRK10117 299 TSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP- 377 (474)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999862
Q ss_pred CccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHH
Q 004411 450 PVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAY 529 (755)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 529 (755)
+++|+||+|||+||+++|.+|++|||||++++|+||++||+||.+||+.|+++++++|.+||+.+
T Consensus 378 ---------------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~ 442 (474)
T PRK10117 378 ---------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINH 442 (474)
T ss_pred ---------------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 004411 530 WAKSIDQDLERACR 543 (755)
Q Consensus 530 W~~~~l~~l~~~~~ 543 (755)
|+++||.+|.+...
T Consensus 443 W~~~fL~~L~~~~~ 456 (474)
T PRK10117 443 WQECFISDLKQIVP 456 (474)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999998753
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-118 Score=999.98 Aligned_cols=462 Identities=26% Similarity=0.451 Sum_probs=426.1
Q ss_pred EEcCCccceeEeCCCC-ceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCC-cch-hhHHHhhhcCeeEEEEeCChH
Q 004411 56 VANQLPVKAYYEKDSN-KWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGV-DDQ-EEVSTILLEKFKCVPTFLPAD 132 (755)
Q Consensus 56 vsnrlP~~~~~~~~~~-~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~~ 132 (755)
||||||+.++++++|+ +|.+++++|||+++|.+.+.+..+++||||+|...++ ++. +.+......+|+|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999866542 5888999999999999877655789999999965321 111 112222245799999999999
Q ss_pred hHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhc
Q 004411 133 VHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRF 212 (755)
Q Consensus 133 ~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~ 212 (755)
++++||+||||++|||+|||+.+. ..|++++|++|++||++||++|++.+++ +|+|||||||||+||++||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998654 5799999999999999999999999987 5999999999999999999999
Q ss_pred CCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCc--------------
Q 004411 213 HRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRG-------------- 278 (755)
Q Consensus 213 ~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~-------------- 278 (755)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|++|+++....+
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999987654321
Q ss_pred ---eeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhC
Q 004411 279 ---YIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355 (755)
Q Consensus 279 ---~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~ 355 (755)
.+++.|+||+++|+++|+|||++.|.+.+.++++.+.++++|++++++++|++|||||++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 13478999999999999999999999888888888888999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCC
Q 004411 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGM 435 (755)
Q Consensus 356 P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~ 435 (755)
|+++||++|||||.|+|++.++|++++++++++|++||++||+.+|+||+|+++.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 004411 436 NLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRH 515 (755)
Q Consensus 436 nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~ 515 (755)
|||++|||||+++ ++||||+|||+||++++.+|++|||||++++|+||.+||+||.+||+.|+
T Consensus 395 NLVa~Eyva~~~~-----------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~ 457 (487)
T TIGR02398 395 NLVAKEYVAAQGL-----------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARM 457 (487)
T ss_pred CcchhhHHhhhcC-----------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999873 46899999999999999999999999999999999999999999999999
Q ss_pred HHHhhHhhhcCHHHHHHHHHHHHHH
Q 004411 516 EKHYKYISSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 516 ~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (755)
++++++|.+||+.+|+++||.+|..
T Consensus 458 ~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 458 REMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 9999999999999999999998864
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-118 Score=1004.90 Aligned_cols=467 Identities=42% Similarity=0.803 Sum_probs=358.1
Q ss_pred cEEEEEcCCccceeEeCCCCc--eEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCcc--hhhHHHhhhcCeeEEEE
Q 004411 52 RRIIVANQLPVKAYYEKDSNK--WGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDD--QEEVSTILLEKFKCVPT 127 (755)
Q Consensus 52 ~~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~--~~~~~~~~~~~~~~~pv 127 (755)
|+||||||||+.++++++.|. |+++.+.|||+++|.+.+. ..+++||||+|.+.+..+ ++.+.+.+.++|+|+||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~-~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLK-KRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHH-HH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHHh-cCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 799999999999998874455 8888899999999976444 479999999998776544 55566677899999999
Q ss_pred eCChHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHH
Q 004411 128 FLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSF 207 (755)
Q Consensus 128 ~l~~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~ 207 (755)
||+++++++||+||||++|||+|||.++..+ ....|+.+.|++|++||++||++|++.+++ +|+|||||||||+||++
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-DLARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCccccccccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 9999999999999999999999999876212 226899999999999999999999999996 59999999999999999
Q ss_pred HHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCe
Q 004411 208 LRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGR 287 (755)
Q Consensus 208 lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr 287 (755)
||+++|+++||||||+|||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++...+| ++.|+||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887765 6899999
Q ss_pred EEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCC-ceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEE
Q 004411 288 TVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (755)
Q Consensus 288 ~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (755)
.++|.++|+|||++.|...+.++++.+++++|++++++ +++|+||||+|++|||.+||+||++||++||+++|||+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999988888999999999999988 49999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 367 i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
|+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|+|++||||++||+|||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhc
Q 004411 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (755)
++ ++|+||+|||+||+++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+|
T Consensus 397 ~~-----------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~ 459 (474)
T PF00982_consen 397 DD-----------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREH 459 (474)
T ss_dssp -T-----------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT
T ss_pred cC-----------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhC
Confidence 73 579999999999999997 679999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 004411 526 DVAYWAKSIDQDLER 540 (755)
Q Consensus 526 ~~~~W~~~~l~~l~~ 540 (755)
|+.+|+++||++|++
T Consensus 460 ~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 460 DVQWWAESFLRDLKR 474 (474)
T ss_dssp -HHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhhC
Confidence 999999999999974
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-113 Score=938.26 Aligned_cols=467 Identities=39% Similarity=0.662 Sum_probs=431.3
Q ss_pred CCCCCCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCcchhhHHHhhhcCeeEE
Q 004411 46 IVEPCQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCV 125 (755)
Q Consensus 46 ~~~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (755)
+.....|+||||||+|+...+..+++...+..++|||+++|...+. ..+++|+||+|...++++.....+....++...
T Consensus 10 ~~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~~-~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~ 88 (486)
T COG0380 10 SPLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLR-VDGGTWIGWSGTTGPTDESSDDLKERIGEFTSA 88 (486)
T ss_pred CcccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhhH-hhcceEEecCceeccccccchhhhhccccceEE
Confidence 4567789999999999998765666678889999999999977544 589999999997664333223333445689999
Q ss_pred EEeCChHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHH
Q 004411 126 PTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLP 205 (755)
Q Consensus 126 pv~l~~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp 205 (755)
||+++.+++++||+||||++|||+|||+.+. ..|++++|++|++||++||++|++++++ +|+||||||||+|+|
T Consensus 89 ~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~-gDiIWVhDYhL~L~P 162 (486)
T COG0380 89 PVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLVP 162 (486)
T ss_pred EEecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEechhhhhH
Confidence 9999999999999999999999999999875 5799999999999999999999999997 599999999999999
Q ss_pred HHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEE--
Q 004411 206 SFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD-- 283 (755)
Q Consensus 206 ~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~-- 283 (755)
+|||++.|+++||||||+|||++|+|+|||+|++||+|||+||+|||||++|++||++||+|+++.... ..+.
T Consensus 163 ~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~ 237 (486)
T COG0380 163 QMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFN 237 (486)
T ss_pred HHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----cccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999986521 1233
Q ss_pred -EcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCC-ceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCc
Q 004411 284 -YFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGK 361 (755)
Q Consensus 284 -~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~ 361 (755)
++|+.+++..+|+|||+..|.....++.+..+..++++.+.+ +++|+||||+|++||+.++++||++||++||+|+||
T Consensus 238 ~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~k 317 (486)
T COG0380 238 GADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGK 317 (486)
T ss_pred ccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCc
Confidence 447999999999999999999998888888888999998876 999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCcccee
Q 004411 362 VVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYK 441 (755)
Q Consensus 362 vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~E 441 (755)
|+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+++.++++++.+||++|||+++||+|||||||++|
T Consensus 318 vvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakE 397 (486)
T COG0380 318 VVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKE 397 (486)
T ss_pred eEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhH
Q 004411 442 YTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKY 521 (755)
Q Consensus 442 a~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 521 (755)
|+||+. +++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+++||++|++++++.
T Consensus 398 yVa~q~-----------------~~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~ 460 (486)
T COG0380 398 YVAAQR-----------------DKPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQ 460 (486)
T ss_pred HHHhhc-----------------CCCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 999987 357999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCHHHHHHHHHHHHHHH
Q 004411 522 ISSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 522 v~~~~~~~W~~~~l~~l~~~ 541 (755)
|.+||+++|+++|+.+|.+.
T Consensus 461 v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 461 VLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred HHhhhHHHHHHHHHHHHHhc
Confidence 99999999999999999873
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-107 Score=915.18 Aligned_cols=454 Identities=39% Similarity=0.686 Sum_probs=420.7
Q ss_pred cEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCc-chhhHHHhhhcCeeEEEEeCC
Q 004411 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVPTFLP 130 (755)
Q Consensus 52 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~-~~~~~~~~~~~~~~~~pv~l~ 130 (755)
||||||||+|+.+.++ + ++.+.|||+++|.+.+. ..+++||||+|...+++ ++..+...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 6999999999988653 1 56678999999988766 46999999999765433 234444556788999999999
Q ss_pred hHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHh
Q 004411 131 ADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRK 210 (755)
Q Consensus 131 ~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~ 210 (755)
++++++||+||||++|||+|||+++. .+|++++|++|++||++||++|++++++ +|+|||||||||++|.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999998654 5799999999999999999999999987 59999999999999999999
Q ss_pred hcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEE
Q 004411 211 RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290 (755)
Q Consensus 211 ~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~ 290 (755)
+.|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876432 3678899999
Q ss_pred EEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 004411 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNP 370 (755)
Q Consensus 291 i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 370 (755)
|.++|+|||++.|.+....+++.+..+++|++++++++|++|||+++.||+..+|+||++|++++|+++++++|+||+.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999877777777777889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCC
Q 004411 371 ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (755)
Q Consensus 371 ~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 450 (755)
+|+++++|+++++++++++++||++||..+|.||+++++.++++++.++|++|||||+||++||||||++||||||.+
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P-- 381 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP-- 381 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred ccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHH
Q 004411 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530 (755)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 530 (755)
..|++|+|+++|+++.+.+|++|||+|++++|+||.++|+|+.+||+.|+++++++|.+||+.+|
T Consensus 382 ---------------~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W 446 (456)
T TIGR02400 382 ---------------KDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRW 446 (456)
T ss_pred ---------------CCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHH
Confidence 34899999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 004411 531 AKSIDQDLE 539 (755)
Q Consensus 531 ~~~~l~~l~ 539 (755)
+++|+.+|.
T Consensus 447 ~~~~l~~l~ 455 (456)
T TIGR02400 447 REDFLSDLN 455 (456)
T ss_pred HHHHHHHhh
Confidence 999999875
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-97 Score=841.86 Aligned_cols=459 Identities=42% Similarity=0.759 Sum_probs=424.6
Q ss_pred cEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCcchhhHHHhhhcCeeEEEEeCCh
Q 004411 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLPA 131 (755)
Q Consensus 52 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~ 131 (755)
|+||||||+|+.++++++ |.|+++++.|||+.+|.+.+. ..+++||||++...+..+.+.+.+....+|+|+|||+++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKGLLK-RTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHHHHh-cCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998764 589999999999999987555 479999999998766544434556677899999999999
Q ss_pred HhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhh
Q 004411 132 DVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKR 211 (755)
Q Consensus 132 ~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~ 211 (755)
++++.||+||||++|||+|||+.+. .+|+.++|++|++||++||++|++.+++ +|+||||||||+++|.++|++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999776 5799999999999999999999999997 599999999999999999999
Q ss_pred cCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEE
Q 004411 212 FHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291 (755)
Q Consensus 212 ~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i 291 (755)
.++++||||+|||||++|+|+++|++++|+++|++||+|||||++|++||+++|+++++.+.... ..+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886542 357899999999
Q ss_pred EEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 004411 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA 371 (755)
Q Consensus 292 ~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 371 (755)
.++|+|||++.|.+....++..+..++++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999987765555555556667777899999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCc
Q 004411 372 RSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPV 451 (755)
Q Consensus 372 r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~ 451 (755)
|+++++++++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||||||++||||||.
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~---- 385 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQD---- 385 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEec----
Confidence 9999999999999999999999999988899999999999999999999999999999999999999999999987
Q ss_pred cccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHH
Q 004411 452 LDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531 (755)
Q Consensus 452 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 531 (755)
+++|++|+|+++|+++.+.+|++|||+|++++|++|.++|+|+++|++.++++++++|.++|+..|+
T Consensus 386 -------------p~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~ 452 (460)
T cd03788 386 -------------DDPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWA 452 (460)
T ss_pred -------------CCCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 3468999999999999888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 004411 532 KSIDQDL 538 (755)
Q Consensus 532 ~~~l~~l 538 (755)
++|+.+|
T Consensus 453 ~~~l~~l 459 (460)
T cd03788 453 NSFLDDL 459 (460)
T ss_pred HHHHHhh
Confidence 9999887
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=315.09 Aligned_cols=509 Identities=15% Similarity=0.132 Sum_probs=312.1
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhh-----------------cCCChHHH-HHHhhhCCEEEE
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR-----------------TLPVRDEI-LKSLLNSDLIGF 252 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r-----------------~lp~~~~i-l~~ll~~Dligf 252 (755)
.|+||-|+++-..++..|++++ ++|.+++.|+. ..+-++ .++.|-+. -..+-.||.|.-
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIa 387 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVIT 387 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEE
Confidence 3999999999889988898876 68999999973 112111 01222221 123677899999
Q ss_pred eCHHHHHHHHHHH-------hhHhCccccccCceeEEEEcCe-EEEEEEEeccCCcccccccccCchh------------
Q 004411 253 HTFDYARHFLSSC-------SRMLGLNYESKRGYIGLDYFGR-TVSIKILPVGIHMGQFESIMSLDVT------------ 312 (755)
Q Consensus 253 ~t~~~~~~Fl~~~-------~r~lg~~~~~~~~~~~i~~~gr-~~~i~v~p~GId~~~f~~~~~~~~~------------ 312 (755)
.|......-...- .|.|.. ...+| +.++|+ .-++.|+|+|||+++|.+.....+.
T Consensus 388 sT~qE~~eq~~lY~~~~~~~~~~~~~--~~~~g---v~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~ 462 (1050)
T TIGR02468 388 STRQEIEEQWGLYDGFDVILERKLRA--RARRG---VSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKP 462 (1050)
T ss_pred eCHHHHHHHHHHhccCCchhhhhhhh--hhccc---ccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccc
Confidence 8887766433210 011100 01111 233332 2388999999999999874211110
Q ss_pred -HHHHHHHHHHc--CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchh----HHHHHHHH
Q 004411 313 -GQKVKELKEKF--DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKD----VQDLLSDT 385 (755)
Q Consensus 313 -~~~~~~lr~~~--~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~----~~~l~~~i 385 (755)
.....++++.+ +++++||+|||+++.||+..+|+||..+.+..+.. ++++ ++|... ...+ ......++
T Consensus 463 ~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L 537 (1050)
T TIGR02468 463 DPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSV 537 (1050)
T ss_pred cchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHH
Confidence 00112344433 57899999999999999999999999986543321 2333 345321 1111 11234566
Q ss_pred HHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhC----cEEEEcCCCcCCCccceeeeecccCCCccccccCCCCC
Q 004411 386 NRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA----ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEK 461 (755)
Q Consensus 386 ~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~ 461 (755)
..++++.+.. + .|.| .++++.++++++|+.| ||||+||.+||||++++||||||.
T Consensus 538 ~~li~~lgL~-g-----~V~F-lG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGl-------------- 596 (1050)
T TIGR02468 538 LKLIDKYDLY-G-----QVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL-------------- 596 (1050)
T ss_pred HHHHHHhCCC-C-----eEEe-cCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCC--------------
Confidence 6676665432 2 3554 5689999999999998 699999999999999999999975
Q ss_pred CCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHH
Q 004411 462 NPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 462 ~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (755)
|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+.+ +.++...+..++.+.+++|..-++.+++.+
T Consensus 597 -------PVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i 668 (1050)
T TIGR02468 597 -------PMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRI 668 (1050)
T ss_pred -------CEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 899999999998883 599999999999999999999864 456666677888899999999999999888
Q ss_pred HHHHHhccc-cccc-----c-----cC--------CCcceeEeec----Cc--cc-cccCh----HHHHH----------
Q 004411 539 ERACRDHLF-KRCW-----G-----VG--------LGLGFRIVAL----GP--EF-RKLGM----HHIAS---------- 578 (755)
Q Consensus 539 ~~~~~~~~~-~~~~-----~-----~g--------~g~~~~~~~~----~~--~f-~~l~~----~~i~~---------- 578 (755)
......+.. ++.. . .+ +++++.+-.- .. +. ..++. ..|.+
T Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1050)
T TIGR02468 669 ASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPK 748 (1050)
T ss_pred HHHhccCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhcccccc
Confidence 876544311 0000 0 01 0011110000 00 00 00000 01111
Q ss_pred -------------Hhh--ccCceEEE--ecCCCcCCCCCCCCCCCCHHHHHHHHHHhc---CCCCcEEEEcCCChhhHHh
Q 004411 579 -------------AYN--KTNSRLIL--LDYDGTVMPQTSEDKRPSTEVLSILNDLCN---DPKNAVFIVSGRGKDSLGN 638 (755)
Q Consensus 579 -------------~y~--~s~~rlI~--lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~---d~~~~V~IvSGR~~~~L~~ 638 (755)
.|. .-.+++|+ +|+|+| +. ..+.+.++++.+.+ .....++++|||+.+.+.+
T Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~-------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~ 820 (1050)
T TIGR02468 749 GSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD-------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQS 820 (1050)
T ss_pred ccccccccccccccCccccccceEEEEEeccCCC-CC-------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHH
Confidence 111 11245666 999999 32 12344445555542 2235578999999999999
Q ss_pred hhcC--CC--C-ceEEcCCceEEEecC-----CCceeEc---ccCcCccH-HHHHHHHHHHHhcCC--------CCcEEe
Q 004411 639 WFSG--VE--K-LGLSAEHGYFTRWSK-----NSAWEIC---SLTRDFDW-KEIAEPVMKLYTETT--------DGSFIE 696 (755)
Q Consensus 639 ~f~~--i~--~-l~liaenGa~i~~~~-----~~~w~~~---~~~~~~~w-~~~v~~i~~~y~~~t--------~gs~iE 696 (755)
.+.. +| . -.+||.-|+.|+++. +..|..- ...++..| .+.+++.+..+.... ++...+
T Consensus 821 ~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q 900 (1050)
T TIGR02468 821 FLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEE 900 (1050)
T ss_pred HHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceec
Confidence 8853 33 2 237999999999862 1223310 11345678 466776665554321 333444
Q ss_pred ecc----eEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEE--ecCeEEEEEeCCCCCCC
Q 004411 697 DKE----TAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVK--RGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 697 ~k~----~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~--sG~~~VEV~p~gvnKG~ 754 (755)
..+ ++++|...+ ++.. ...+++.+.|+.. +....++ ++..+++|.|..+|||.
T Consensus 901 ~~~~q~~~k~SY~v~d--~~~~-~~v~elr~~Lr~~--gLr~~~iys~~~~~LDVlP~~ASKgq 959 (1050)
T TIGR02468 901 DEESSTDHCYAFKVKD--PSKV-PPVKELRKLLRIQ--GLRCHAVYCRNGTRLNVIPLLASRSQ 959 (1050)
T ss_pred ChhhCCCceEEEEecC--cccC-ccHHHHHHHHHhC--CCceEEEeecCCcEeeeeeCCCCHHH
Confidence 333 344444232 2221 2345666666543 3344443 44599999999999983
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-30 Score=263.60 Aligned_cols=179 Identities=33% Similarity=0.516 Sum_probs=154.7
Q ss_pred cChHHHHHHhhccCceEEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceE
Q 004411 571 LGMHHIASAYNKTNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (755)
Q Consensus 571 l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~l 648 (755)
+....+.+.|..+++++|++||||||+++. |....|+++++++|++|+++++|.|+|+|||+...+++|++ ++++++
T Consensus 4 ~~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l 82 (266)
T COG1877 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGL 82 (266)
T ss_pred hhhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccE
Confidence 345567788999999999999999999876 46788999999999999999999999999999999999998 889999
Q ss_pred EcCCceEEEecCCCceeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHH
Q 004411 649 SAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENV 728 (755)
Q Consensus 649 iaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~ 728 (755)
|||||++++.+.+.-|....+..+..|++.+.+++++|.+++||+|||.|++++.||||+++++.+..++.+......
T Consensus 83 ~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~-- 160 (266)
T COG1877 83 IAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLI-- 160 (266)
T ss_pred EEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhcc--
Confidence 999999998876666776655666889999999999999999999999999999999999987765544443333332
Q ss_pred hcCCC-eEEEecCeEEEEEeCCCCCCC
Q 004411 729 LANEP-VVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 729 l~~~~-~~V~sG~~~VEV~p~gvnKG~ 754 (755)
+.. ++|+.|+++|||+|.++|||.
T Consensus 161 --~~~~~~v~~gk~vVEvrp~~~~KG~ 185 (266)
T COG1877 161 --NELKLRVTPGKMVVELRPPGVSKGA 185 (266)
T ss_pred --ccccEEEEeCceEEEEeeCCcchHH
Confidence 222 899999999999999999995
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-28 Score=255.15 Aligned_cols=165 Identities=38% Similarity=0.680 Sum_probs=123.4
Q ss_pred EecCCCcCCCCCC--CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCCceeE
Q 004411 589 LLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEI 666 (755)
Q Consensus 589 ~lD~DGTL~~~~~--~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~ 666 (755)
||||||||+|+.+ ....|++++.++|++|+++++|.|+|+|||+.+.++.++ .+++++++||||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~-~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFG-GIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH--S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhc-CCCCceEEEEeeEEeccCccccccc
Confidence 6999999999764 567899999999999999999999999999999965555 5789999999999999997767775
Q ss_pred cccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCC-CeEEEecCeEEEE
Q 004411 667 CSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE-PVVVKRGQHIVEV 745 (755)
Q Consensus 667 ~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~-~~~V~sG~~~VEV 745 (755)
.....+..|++.+.++++++.++++|++||+|+++++||||+++++++..+++++.+++.+.+... ++.++.|+++|||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 444566789999999999999999999999999999999999999999999999999999877665 8999999999999
Q ss_pred EeCCCCCCC
Q 004411 746 KPQVCQHQS 754 (755)
Q Consensus 746 ~p~gvnKG~ 754 (755)
+|.++|||+
T Consensus 160 rp~~~~KG~ 168 (235)
T PF02358_consen 160 RPPGVNKGS 168 (235)
T ss_dssp E-TT--HHH
T ss_pred EeCCCChHH
Confidence 999999985
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-25 Score=243.93 Aligned_cols=301 Identities=18% Similarity=0.158 Sum_probs=209.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhh
Q 004411 166 RGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL 245 (755)
Q Consensus 166 ~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll 245 (755)
...+..|...++.++.++.... +.|+||+|+++.+.++...+. .++|++++.|+++.... . .....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~--~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~-~---~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDL--DADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN-R---RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccC--CCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc-H---HHHHHHHHHHH
Confidence 4467888888888876533332 349999999998777666543 36788899999875321 0 01122223345
Q ss_pred hCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--
Q 004411 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-- 323 (755)
Q Consensus 246 ~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 323 (755)
.+|.+.+.+.++++. + +..+ ++ ++|+|||+........ .......+++++
T Consensus 135 ~~d~~i~~~~~~~~~-----------------~-----~~~~--~~-vipngvd~~~~~~~~~---~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPP-----------------Q-----VPPR--KV-IIPPSIDPLSGKNREL---SPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCC-----------------C-----CCCc--eE-EeCCCCCCCccccCCC---CHHHHHHHHHHhCC
Confidence 577777665322211 0 1111 23 8999999764221111 112234455666
Q ss_pred -CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004411 324 -DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (755)
Q Consensus 324 -~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~ 402 (755)
.++++|++|||+++.||+..+++|++.+.+++|+++ |+++|..... .++..++. +++.++.+.. .
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~---~~~~~~~~~~------~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVY---EEVLEYAEGD------P 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHH---HHHHHHhCCC------C
Confidence 478899999999999999999999999988888866 8888864321 12222322 2333222211 1
Q ss_pred cEEEecCC-CChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc
Q 004411 403 PIVIIKEP-LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481 (755)
Q Consensus 403 pV~~~~~~-v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 481 (755)
.|.+++.. ++.+++.++|++||+|++||.+||||++++||||||. |+|+|..+|..+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~---------------------Pvv~s~~~~~~~~ 311 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGK---------------------PVIAGPVGGIPLQ 311 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCC---------------------CEEEcCCCCchhh
Confidence 37766543 4899999999999999999999999999999999975 8999999998888
Q ss_pred cC---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHHHHH
Q 004411 482 LS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLER 540 (755)
Q Consensus 482 l~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 540 (755)
+. +|++++ +.+++|++|.++++++ ++++.+.++.++++. .+++...++++++.+++
T Consensus 312 i~~~~~g~~~~--~~~~~a~~i~~ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 312 IEDGETGFLVD--TVEEAAVRILYLLRDP-ELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cccCCceEEeC--CcHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 73 478887 4678999999999864 566777778888874 78999999999877654
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-24 Score=252.40 Aligned_cols=317 Identities=14% Similarity=0.139 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHhh-----cCCCeEEEEEecC-----CCchhhh-hcCCCh-
Q 004411 171 AYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKR-----FHRVKVGFFLHSP-----FPSSEIY-RTLPVR- 237 (755)
Q Consensus 171 ~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~~-r~lp~~- 237 (755)
.|.-..+..++.+... .+| ||||+||||..++|.++.+. +.++++.|++|.- ||...+. ..+|+.
T Consensus 592 RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~ 669 (977)
T PLN02939 592 RFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQ 669 (977)
T ss_pred HHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHH
Confidence 3443444444433332 234 89999999999985544432 4568999999965 3322211 112211
Q ss_pred --------------HHHH-HHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCccc
Q 004411 238 --------------DEIL-KSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQ 302 (755)
Q Consensus 238 --------------~~il-~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~ 302 (755)
-.++ .++..||.|..-++.|++.-++ .---|++. .+..+..++.+||||||++.
T Consensus 670 l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID~e~ 738 (977)
T PLN02939 670 LDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGIDTDT 738 (977)
T ss_pred ccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecceehhh
Confidence 1123 3567799999999999988664 11111110 12234568889999999999
Q ss_pred ccccccC-----------chhHHHHHHHHHHcC------CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEE
Q 004411 303 FESIMSL-----------DVTGQKVKELKEKFD------GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLV 365 (755)
Q Consensus 303 f~~~~~~-----------~~~~~~~~~lr~~~~------~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLv 365 (755)
|.+.... .........++++++ +.++|++|||+++.||+..+++|+.++++ ++ +.||
T Consensus 739 wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLV 812 (977)
T PLN02939 739 WNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFV 812 (977)
T ss_pred cCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEE
Confidence 9874310 001112345777772 35899999999999999999999998875 33 3488
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeec
Q 004411 366 QITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (755)
Q Consensus 366 qi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~ 445 (755)
++|. |++ ..+++++..++.+++.. ..|.|+ +..+......+|+.||+||+||.+|||||+++|||+|
T Consensus 813 IvGd-----Gp~-~~~e~eL~~La~~l~l~------drV~Fl-G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAy 879 (977)
T PLN02939 813 LLGS-----SPV-PHIQREFEGIADQFQSN------NNIRLI-LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRY 879 (977)
T ss_pred EEeC-----CCc-HHHHHHHHHHHHHcCCC------CeEEEE-eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHC
Confidence 7773 322 13456677777665321 136665 4567777789999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC------------CcEEeCCCCHHHHHHHHHHHhc---CCHHH
Q 004411 446 RQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS------------GAIRVNPWNVDAVADAMDSALQ---MENQE 510 (755)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~ai~VnP~d~~~~A~ai~~aL~---m~~~e 510 (755)
|. |+|++..+|..+.+. +|++++|.|+++++++|.+++. ..++.
T Consensus 880 Gt---------------------PPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~ 938 (977)
T PLN02939 880 GS---------------------VPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEV 938 (977)
T ss_pred CC---------------------CEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHH
Confidence 64 788999999987661 4899999999999999999986 23444
Q ss_pred HHHHHHHHhhHhhhcCHHHHHHHHHHHHHHHH
Q 004411 511 KILRHEKHYKYISSHDVAYWAKSIDQDLERAC 542 (755)
Q Consensus 511 r~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 542 (755)
++.+.++. ....++|...++.|++-..++.
T Consensus 939 ~~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 939 WKQLVQKD--MNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 44333322 2357899999999887766654
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=246.80 Aligned_cols=296 Identities=18% Similarity=0.195 Sum_probs=198.6
Q ss_pred CCEEEEeCCccchHHHHHHhhc----CCCeEEEEEecCCCc----hhhhhcC--CC-------------hHHHHHHhhhC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRF----HRVKVGFFLHSPFPS----SEIYRTL--PV-------------RDEILKSLLNS 247 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~----~~~~i~~flH~PfP~----~e~~r~l--p~-------------~~~il~~ll~~ 247 (755)
-|+||.||+|..++|.+++++. .++|++++.|..-.. .+.+..+ |. ..-+-.++..|
T Consensus 119 pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 198 (466)
T PRK00654 119 PDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYA 198 (466)
T ss_pred CceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhc
Confidence 4999999999999999998663 468999999986211 1111111 11 01112345667
Q ss_pred CEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccC-----------chhHHHH
Q 004411 248 DLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL-----------DVTGQKV 316 (755)
Q Consensus 248 Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~-----------~~~~~~~ 316 (755)
|.|...+..+++..... ..|. | +.-.+..+..++.++|+|||++.|.+.... ....+..
T Consensus 199 d~vitvS~~~~~ei~~~---~~~~------g-l~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k 268 (466)
T PRK00654 199 DRVTTVSPTYAREITTP---EFGY------G-LEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENK 268 (466)
T ss_pred CcCeeeCHHHHHHhccc---cCCc------C-hHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHH
Confidence 77766666665543210 0000 0 000011234578899999999998764210 0111223
Q ss_pred HHHHHHcC----CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 004411 317 KELKEKFD----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEI 392 (755)
Q Consensus 317 ~~lr~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~I 392 (755)
+.++++++ +.++|++|||+++.||+..+++|+++++++ + +.|+++|. ++ ..+++++++++.+.
T Consensus 269 ~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~-----g~--~~~~~~l~~l~~~~ 335 (466)
T PRK00654 269 RALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGT-----GD--PELEEAFRALAARY 335 (466)
T ss_pred HHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEec-----Cc--HHHHHHHHHHHHHC
Confidence 45677663 568999999999999999999999998753 3 44887773 22 12455677777654
Q ss_pred hcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEE
Q 004411 393 NLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV 472 (755)
Q Consensus 393 n~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~ 472 (755)
+. .|.++.+. +.+....+|+.||+||+||.+||||++.+|||+||. |+|+
T Consensus 336 ~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~---------------------p~V~ 385 (466)
T PRK00654 336 PG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGT---------------------LPIV 385 (466)
T ss_pred CC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCC---------------------CEEE
Confidence 31 25555443 566677999999999999999999999999999964 8899
Q ss_pred eCCCCccccc-C--------CcEEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHH
Q 004411 473 SEFIGCSPSL-S--------GAIRVNPWNVDAVADAMDSALQME--NQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 473 Se~~G~~~~l-~--------~ai~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (755)
|..+|+.+.+ . +|++|+|.|+++++++|.++++.. ++.++.+.++.. ...++|..-++++++-.+++
T Consensus 386 ~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 386 RRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred eCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 9999999987 2 389999999999999999998732 222333322222 25678888888887766554
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-24 Score=253.45 Aligned_cols=308 Identities=12% Similarity=0.085 Sum_probs=217.8
Q ss_pred HHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHhh-----cCCCeEEEEEecCCCchhhhhcCCChHHHHH
Q 004411 169 WQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKR-----FHRVKVGFFLHSPFPSSEIYRTLPVRDEILK 242 (755)
Q Consensus 169 w~~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~-----~~~~~i~~flH~PfP~~e~~r~lp~~~~il~ 242 (755)
..-|...++..++.+... .+| ||||+||+|..++|.++++. +.+++++++.|..-. ....+-.
T Consensus 689 ~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~---------~~n~lk~ 757 (1036)
T PLN02316 689 GERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF---------GANHIGK 757 (1036)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc---------chhHHHH
Confidence 344554555555544332 234 99999999999999999875 356899999996421 1122335
Q ss_pred HhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccC--c-----h----
Q 004411 243 SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL--D-----V---- 311 (755)
Q Consensus 243 ~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~--~-----~---- 311 (755)
++..||.|.--+..|++..+.. .. ...+..++.+||+|||++.|.+.... + +
T Consensus 758 ~l~~AD~ViTVS~tya~EI~~~----~~-------------l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~ 820 (1036)
T PLN02316 758 AMAYADKATTVSPTYSREVSGN----SA-------------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVE 820 (1036)
T ss_pred HHHHCCEEEeCCHHHHHHHHhc----cC-------------cccccCCEEEEECCccccccCCcccccccccCCchhhhh
Confidence 6788999999999888776531 00 01123578899999999988764210 0 0
Q ss_pred -hHHHHHHHHHHcC----CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHH
Q 004411 312 -TGQKVKELKEKFD----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTN 386 (755)
Q Consensus 312 -~~~~~~~lr~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~ 386 (755)
.......++++++ +.++|++||||++.||+..+++|+.++++. + +.||++|. |++ ..++.++.
T Consensus 821 gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~l~ 888 (1036)
T PLN02316 821 GKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQNDFV 888 (1036)
T ss_pred hhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHHHH
Confidence 0122345777772 578999999999999999999999999863 3 34777773 333 24567788
Q ss_pred HHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCC
Q 004411 387 RIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQK 466 (755)
Q Consensus 387 ~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~ 466 (755)
+++.+++..+.. .|.|.. ..+......+|++||+||+||..|||||+.+|||+||.
T Consensus 889 ~La~~Lg~~~~~----rV~f~g-~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~Gt------------------- 944 (1036)
T PLN02316 889 NLANQLHSSHHD----RARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGS------------------- 944 (1036)
T ss_pred HHHHHhCccCCC----eEEEEe-cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCC-------------------
Confidence 888877654421 366543 33343334799999999999999999999999999975
Q ss_pred CceEEEeCCCCccccc-C---------------CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh-hhcCHHH
Q 004411 467 KSVIIVSEFIGCSPSL-S---------------GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAY 529 (755)
Q Consensus 467 ~g~lV~Se~~G~~~~l-~---------------~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~ 529 (755)
|+|+|..+|..+.+ + +|++|+|.|+++++++|.++|......+....+..++.+ ..++|..
T Consensus 945 --ppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~ 1022 (1036)
T PLN02316 945 --IPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNR 1022 (1036)
T ss_pred --CeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHH
Confidence 78889999999887 2 489999999999999999999865333333333445544 4589999
Q ss_pred HHHHHHHHHHHHH
Q 004411 530 WAKSIDQDLERAC 542 (755)
Q Consensus 530 W~~~~l~~l~~~~ 542 (755)
=++.|++-..++.
T Consensus 1023 ~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1023 PALDYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHHHHh
Confidence 9999987766543
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.9e-24 Score=234.93 Aligned_cols=269 Identities=18% Similarity=0.260 Sum_probs=201.4
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg 270 (755)
.|+|++|+.. .+...++++.+++++.+.+|..|. .+. + -.++.|.+.+.... .++.. ..
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-~~~----------~---~~~~~ii~~S~~~~-~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-PEL----------L---DKNAKIIVPSQFLK-KFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-hhH----------h---ccCCEEEEcCHHHH-HHHHh---hC-
Confidence 5999999843 344567888899999999998763 111 1 13577777665433 33321 00
Q ss_pred ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCChHHHHHH
Q 004411 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGISLKFLA 347 (755)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A 347 (755)
...++.++|+|||.+.|.+.. ...+++++ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 012467899999998886421 12234444 367899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEE
Q 004411 348 MGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCV 427 (755)
Q Consensus 348 ~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 427 (755)
+.++.+++|+++ |+++|.+......+..++++++.+++.+++. .|+++ +.++.+++.++|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~~~-G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCIML-GGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEEEe-CCCCHHHHHHHHHhCCEEE
Confidence 999999999876 8888865432222334566777777766532 36654 6789999999999999999
Q ss_pred EcCC-CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcE-EeCCCCHHHHHHHHHH
Q 004411 428 VNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAI-RVNPWNVDAVADAMDS 502 (755)
Q Consensus 428 vtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai-~VnP~d~~~~A~ai~~ 502 (755)
+||. .||||++++||||||. |+|+|..+|+.+.+. +|+ +++|.|++++|++|.+
T Consensus 282 ~pS~~~E~f~~~~lEAma~G~---------------------PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ 340 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAAGK---------------------PVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINR 340 (380)
T ss_pred eCCCCccccccHHHHHHHcCC---------------------CEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHH
Confidence 9997 5999999999999975 899999999888773 366 6789999999999999
Q ss_pred HhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHHHHHHH
Q 004411 503 ALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 503 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 540 (755)
++++++ +..+.++.++++ .++++..-++++++.++.
T Consensus 341 ll~d~~--~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 341 TLADPE--LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HHcCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999764 345667777775 568999999999888765
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-24 Score=243.30 Aligned_cols=319 Identities=14% Similarity=0.157 Sum_probs=214.9
Q ss_pred hhHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHhhc------CCCeEEEEEecCC-----CchhhhhcC
Q 004411 167 GEWQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKRF------HRVKVGFFLHSPF-----PSSEIYRTL 234 (755)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~~r~l 234 (755)
+....|.-.++..++.+... ++| |+||+||||..++|.+++++. .++|++++.|... |....-..+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 34556666666666655432 244 999999999999999998753 4789999999752 211111113
Q ss_pred CCh------------HHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCccc
Q 004411 235 PVR------------DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQ 302 (755)
Q Consensus 235 p~~------------~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~ 302 (755)
|.. .-+-.++..||.|.--++.|++...+....-.|++. .+..+..++.++|+|||++.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 311 112235677888888888777664320000011110 01113457889999999999
Q ss_pred ccccccCc-----------hhHHHHHHHHHHc-----CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEE
Q 004411 303 FESIMSLD-----------VTGQKVKELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (755)
Q Consensus 303 f~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (755)
|.+..... ........+++++ +++++|++|||+++.||+..+++|+.++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 97642110 0011223455555 2568999999999999999999999998752 3 44888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 367 i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
+|. |+. .+++++++++.+. +. .|.+. +.++.+++..+|+.||+||+||..||||++.+|||+||
T Consensus 342 vG~-----G~~--~~~~~l~~l~~~~----~~----~V~~~-g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G 405 (489)
T PRK14098 342 CGS-----GDK--EYEKRFQDFAEEH----PE----QVSVQ-TEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG 405 (489)
T ss_pred EeC-----CCH--HHHHHHHHHHHHC----CC----CEEEE-EecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC
Confidence 883 221 2455677776653 21 26655 46888999999999999999999999999999999996
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-------CcEEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHH
Q 004411 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-------GAIRVNPWNVDAVADAMDSALQM--ENQEKILRHEK 517 (755)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-------~ai~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~~ 517 (755)
. |+|++..+|+.+.+. +|++++|.|++++|++|.+++.+ .++.++...++
T Consensus 406 ~---------------------ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~ 464 (489)
T PRK14098 406 T---------------------IPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLE 464 (489)
T ss_pred C---------------------CeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 4 788999999987762 58999999999999999998743 22222222221
Q ss_pred HhhHhhhcCHHHHHHHHHHHHHHH
Q 004411 518 HYKYISSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 518 ~~~~v~~~~~~~W~~~~l~~l~~~ 541 (755)
. ..+.++|..-++++++-.+++
T Consensus 465 ~--~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 465 A--MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred H--hcCCCChHHHHHHHHHHHHHH
Confidence 1 235688888888887766554
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=9e-24 Score=239.35 Aligned_cols=297 Identities=15% Similarity=0.123 Sum_probs=192.1
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCch-h-hhh------------cCCChHH-HHHHhhhCCEEEEeCH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS-E-IYR------------TLPVRDE-ILKSLLNSDLIGFHTF 255 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~-e-~~r------------~lp~~~~-il~~ll~~Dligf~t~ 255 (755)
.|+|++|+++..++..++++.. ++|++++.|...... . +.. .+..+-. ....+..+|.|...+.
T Consensus 115 ~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 193 (439)
T TIGR02472 115 PDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTH 193 (439)
T ss_pred CCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCH
Confidence 3999999988777777776654 679999999753211 0 000 0000000 0112345666655554
Q ss_pred HHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--CCceEEEEec
Q 004411 256 DYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVD 333 (755)
Q Consensus 256 ~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vd 333 (755)
..++.-+. ... .-...++.++|+|||++.|.+.....+.......+++.. +++++|++||
T Consensus 194 ~~~~~~~~---~~~---------------~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG 255 (439)
T TIGR02472 194 QEIEEQYA---LYD---------------SYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAIS 255 (439)
T ss_pred HHHHHHHH---hcc---------------CCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEc
Confidence 32221110 000 112347889999999999976432211111112222221 4678999999
Q ss_pred cccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEec-CCCCCch-hHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCC
Q 004411 334 DMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN-PARSSGK-DVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411 (755)
Q Consensus 334 Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~-p~r~~~~-~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v 411 (755)
|+++.||+..+|+||.++.+..+.. ++++ ++|. +.+.... ...++.+++.+++++++-. + .|. +.+.+
T Consensus 256 rl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~----~--~V~-f~g~~ 325 (439)
T TIGR02472 256 RPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRDDIRKMESQQREVLQKVLLLIDRYDLY----G--KVA-YPKHH 325 (439)
T ss_pred CCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCccccccccHHHHHHHHHHHHHHHHcCCC----c--eEE-ecCCC
Confidence 9999999999999998642211111 2322 3342 1111111 1112333455555554321 1 255 45688
Q ss_pred ChhhHHHHHHhC----cEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---C
Q 004411 412 STQDKVPYYAIA----ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---G 484 (755)
Q Consensus 412 ~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 484 (755)
+.+++.++|+.| |+||+||.+||||++++||||||. |+|+|..+|+.+.+. +
T Consensus 326 ~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~---------------------PvV~s~~gg~~eiv~~~~~ 384 (439)
T TIGR02472 326 RPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL---------------------PIVATDDGGPRDIIANCRN 384 (439)
T ss_pred CHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC---------------------CEEEeCCCCcHHHhcCCCc
Confidence 999999999988 999999999999999999999975 899999999998884 4
Q ss_pred cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHHH
Q 004411 485 AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDL 538 (755)
Q Consensus 485 ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l 538 (755)
|++|+|.|++++|++|.++++++ ++++.+.++.++++. .++|..-+++|++-|
T Consensus 385 G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 385 GLLVDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred EEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999999865 467777788888875 578888888777644
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-23 Score=238.23 Aligned_cols=292 Identities=18% Similarity=0.210 Sum_probs=201.2
Q ss_pred CCEEEEeCCccchHHHHHHhhcC--CCeEEEEEecCCCc----hhhhhcCCChH--------------H-HHHHhhhCCE
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFH--RVKVGFFLHSPFPS----SEIYRTLPVRD--------------E-ILKSLLNSDL 249 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~--~~~i~~flH~PfP~----~e~~r~lp~~~--------------~-il~~ll~~Dl 249 (755)
-|+||.||+|..++|.++++... ++|++++.|...+. .+.+..+.... . +-.++..||.
T Consensus 129 ~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 208 (473)
T TIGR02095 129 PDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADR 208 (473)
T ss_pred CCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCc
Confidence 49999999999999999988765 38999999986421 22222111110 1 1224566677
Q ss_pred EEEeCHHHHHHHHHHHhhHhCccccccCceeEEE--EcCeEEEEEEEeccCCcccccccccCc-----------hhHHHH
Q 004411 250 IGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD--YFGRTVSIKILPVGIHMGQFESIMSLD-----------VTGQKV 316 (755)
Q Consensus 250 igf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~--~~gr~~~i~v~p~GId~~~f~~~~~~~-----------~~~~~~ 316 (755)
|...+..|++..... ..|. +++ +..+..++.++|+|||.+.|.+..... ......
T Consensus 209 v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k 276 (473)
T TIGR02095 209 VTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENK 276 (473)
T ss_pred CeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhH
Confidence 776666665554321 0000 000 111345788999999999987632100 011223
Q ss_pred HHHHHHcC-----CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 004411 317 KELKEKFD-----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEE 391 (755)
Q Consensus 317 ~~lr~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~ 391 (755)
..++++++ ++++|++|||+.+.||+..+++|++++.++. +.|+++|. ++ +++++++++++.+
T Consensus 277 ~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~-----g~--~~~~~~l~~~~~~ 343 (473)
T TIGR02095 277 EALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGT-----GD--PELEEALRELAER 343 (473)
T ss_pred HHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECC-----CC--HHHHHHHHHHHHH
Confidence 45677762 6789999999999999999999999987542 44887774 22 2345667777654
Q ss_pred HhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEE
Q 004411 392 INLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471 (755)
Q Consensus 392 In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV 471 (755)
. +. .+.++. ..+.+++..+|+.||++++||..||||++.+|||+||. |+|
T Consensus 344 ~----~~----~v~~~~-~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~---------------------pvI 393 (473)
T TIGR02095 344 Y----PG----NVRVII-GYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGT---------------------VPI 393 (473)
T ss_pred C----CC----cEEEEE-cCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCC---------------------CeE
Confidence 3 21 255553 46788889999999999999999999999999999974 899
Q ss_pred EeCCCCcccccC---------CcEEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 472 VSEFIGCSPSLS---------GAIRVNPWNVDAVADAMDSALQM---ENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 472 ~Se~~G~~~~l~---------~ai~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
+|..+|..+.+. +|++++|.|++++|++|.+++.+ .++.++.+.++.. .+.++|..-++++++-.+
T Consensus 394 ~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 394 VRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred EccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 999999999882 38999999999999999999873 2333333333332 246888888888876554
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=240.35 Aligned_cols=295 Identities=17% Similarity=0.158 Sum_probs=193.4
Q ss_pred CEEEEeCCccchHHHHHHhh-cCCCeEEEEEecC-----CCchhhhhc--CCCh-------------HHHHHHhhhCCEE
Q 004411 192 DYVWIHDYHLMVLPSFLRKR-FHRVKVGFFLHSP-----FPSSEIYRT--LPVR-------------DEILKSLLNSDLI 250 (755)
Q Consensus 192 DiVwvhDyhl~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~~r~--lp~~-------------~~il~~ll~~Dli 250 (755)
||||+||||..++|.+++.+ ..+++++++.|.. ||. ..+.. +|.. .-+-.++..||.|
T Consensus 135 DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 135 DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRI 213 (485)
T ss_pred CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCee
Confidence 99999999999999988753 2467899999974 221 11111 1110 0122335566666
Q ss_pred EEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCc-----------hhHHHHHHH
Q 004411 251 GFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLD-----------VTGQKVKEL 319 (755)
Q Consensus 251 gf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~-----------~~~~~~~~l 319 (755)
.--+..+++...+.- .-.|++. .+..+..++.++|+|||++.|.+..... ........+
T Consensus 214 itVS~~~a~ei~~~~-~g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 214 TTVSPTYALEIQGPE-AGMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAAL 283 (485)
T ss_pred eecChhHHHHHhccc-CCcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHH
Confidence 666665554433200 0000000 0111345788999999999997642110 001112456
Q ss_pred HHHcC-----CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc
Q 004411 320 KEKFD-----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINL 394 (755)
Q Consensus 320 r~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~ 394 (755)
+++++ +.++|++|||+++.||+..+++|+++++++ + +.|+++|. |+ .++++++++++.+.
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~~~~-- 348 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAAQAY-- 348 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHHHHC--
Confidence 66662 356888899999999999999999998753 3 34887774 22 23455666666543
Q ss_pred ccCCCCCccEEEecCCCChhhHHHHH-HhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe
Q 004411 395 NFGKPGYEPIVIIKEPLSTQDKVPYY-AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS 473 (755)
Q Consensus 395 ~~g~~~~~pV~~~~~~v~~~el~aly-~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S 473 (755)
+. .++++.+. .+++..+| +.||+||+||.+||||++.+|||+||. |+|+|
T Consensus 349 --~~----~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~---------------------ppVvs 399 (485)
T PRK14099 349 --PG----QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGA---------------------VPVVA 399 (485)
T ss_pred --CC----CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCC---------------------CcEEe
Confidence 21 25434444 67888887 569999999999999999999999964 67779
Q ss_pred CCCCccccc-C-----------CcEEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 474 EFIGCSPSL-S-----------GAIRVNPWNVDAVADAMDSALQ--MENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 474 e~~G~~~~l-~-----------~ai~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
..+|..+.+ . +|++|+|.|++++|++|.+++. ..++.++...++.+ .+.++|..-++++++-.+
T Consensus 400 ~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~ 477 (485)
T PRK14099 400 RVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAALYR 477 (485)
T ss_pred CCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHHHHH
Confidence 999988876 2 4899999999999999998532 22334443333333 367888888888887766
Q ss_pred HHHH
Q 004411 540 RACR 543 (755)
Q Consensus 540 ~~~~ 543 (755)
++..
T Consensus 478 ~l~~ 481 (485)
T PRK14099 478 SLVA 481 (485)
T ss_pred HHHh
Confidence 6543
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-24 Score=223.26 Aligned_cols=166 Identities=30% Similarity=0.454 Sum_probs=139.3
Q ss_pred cCceEEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecC
Q 004411 583 TNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSK 660 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~ 660 (755)
|++++|+|||||||++.. |....+++++.++|++|++++++.|+|+|||+...+...+. +++++++|+||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~-~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVK-LPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCC-CCceeEEeecCEEEecCC
Confidence 578999999999999864 45678899999999999999999999999999999887764 578999999999998643
Q ss_pred CC-ceeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccC-CCCcchhhHHHHHHHHHHHhcCCCeEEEe
Q 004411 661 NS-AWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHA-DPHFGSCQAKELLDHLENVLANEPVVVKR 738 (755)
Q Consensus 661 ~~-~w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~a-d~~~~~~qa~el~~~L~~~l~~~~~~V~s 738 (755)
.. .|.... .....|++.+.++++.+.++ ||+++|+|+.+++||||.+ +++++..|+.++..++.+ ..++.|..
T Consensus 80 ~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~~---~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNLT-EKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKILS---FTDLEVMD 154 (244)
T ss_pred Ccceeeech-hhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHhc---CCCEEEEE
Confidence 22 355421 22247899999999998887 9999999999999999999 788887788777776643 34789999
Q ss_pred cCeEEEEEeCCCCCCC
Q 004411 739 GQHIVEVKPQVCQHQS 754 (755)
Q Consensus 739 G~~~VEV~p~gvnKG~ 754 (755)
|+.++|++|.++|||.
T Consensus 155 g~~~~e~~p~~~~Kg~ 170 (244)
T TIGR00685 155 GKAVVELKPRFVNKGE 170 (244)
T ss_pred CCeEEEEeeCCCCHHH
Confidence 9999999999999984
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-24 Score=228.96 Aligned_cols=167 Identities=19% Similarity=0.351 Sum_probs=137.2
Q ss_pred hccCceEEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEe
Q 004411 581 NKTNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRW 658 (755)
Q Consensus 581 ~~s~~rlI~lD~DGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~ 658 (755)
..+++++||+||||||+|+. |....++++++++|++|++ +..|+|+|||+++.+.++++ +++++++|+||++++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 56678999999999999876 4567899999999999996 46899999999999999997 5679999999999987
Q ss_pred cC-CCceeE----cccCcCccHHHHHHHHHHHH---hcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhc
Q 004411 659 SK-NSAWEI----CSLTRDFDWKEIAEPVMKLY---TETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLA 730 (755)
Q Consensus 659 ~~-~~~w~~----~~~~~~~~w~~~v~~i~~~y---~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~ 730 (755)
++ +..|+. .....+..|.+.+.++++.+ +.++||++||+|+++++||||+++++ ++.++..++.+.+.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 63 335631 11123457888888777665 47899999999999999999999765 33566777877777
Q ss_pred CCC-eEEEecCeEEEEEeC-CCCCCC
Q 004411 731 NEP-VVVKRGQHIVEVKPQ-VCQHQS 754 (755)
Q Consensus 731 ~~~-~~V~sG~~~VEV~p~-gvnKG~ 754 (755)
+.+ +.+..|++++||+|. ++|||+
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~ 272 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGK 272 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHH
Confidence 766 799999999999995 999995
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-22 Score=225.30 Aligned_cols=287 Identities=16% Similarity=0.186 Sum_probs=209.9
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhc---CCC--hHHHHH--HhhhCCEEEEeCHHHHHHHHH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT---LPV--RDEILK--SLLNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~---lp~--~~~il~--~ll~~Dligf~t~~~~~~Fl~ 263 (755)
.|+|++|++....++.++++. .++|+++++|..++-...+.. .|. ...+++ .+-.+|.+.+.+...++.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 499999987666666666554 468899999975421111110 111 112221 345789999999988777653
Q ss_pred HHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCC
Q 004411 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (755)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 340 (755)
. .+ ....++.++|+|||.+.|.+.. ....++++ .++++|+++||+.+.||
T Consensus 181 ~----~~---------------~~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YD---------------ADPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cC---------------CChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 1 12 1234678899999998886421 12234444 36789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCc-hhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHH
Q 004411 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSG-KDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (755)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~-~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~al 419 (755)
+..+++|++++++++|+. ++.|+++|.+.. ++ +.. +++++++++.+.. ..|.+ .+.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~l~------~~v~~-~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATP----DALIELAAELGIA------DRVRF-LPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHH----HHHHHHHHHcCCC------ceEEE-CCCCCHHHHHHH
Confidence 999999999999988873 466888886432 23 222 3455555554321 12554 568999999999
Q ss_pred HHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHH
Q 004411 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAV 496 (755)
Q Consensus 420 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~ 496 (755)
|+.||+|++||..||||++++|||+||. |+|+|..+|..+.+. .|++++|.|++++
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~G~---------------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l 358 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQACGT---------------------PVVAARVGGLPVAVADGETGLLVDGHDPADW 358 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHcCC---------------------CEEEecCCCcHhhhccCCceEECCCCCHHHH
Confidence 9999999999999999999999999975 899999999888773 4899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHH
Q 004411 497 ADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (755)
|++|.++++.+ +++..+.+..++++..+++...++.+++-+.+.
T Consensus 359 a~~i~~~l~~~-~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 359 ADALARLLDDP-RTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999999864 455666667788888899999999888766653
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-22 Score=235.61 Aligned_cols=339 Identities=12% Similarity=0.116 Sum_probs=213.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCC----chhh-hhcCC------
Q 004411 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP----SSEI-YRTLP------ 235 (755)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e~-~r~lp------ 235 (755)
+.|......+...++.+........|+|+.|.+.--+++..++++. +++..++.|..=. .+.. +..+.
T Consensus 362 ~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~ 440 (784)
T TIGR02470 362 EIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFS 440 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhh
Confidence 3465555555555555554433224999999988888888888775 6888888885411 1110 00010
Q ss_pred Ch-HHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccc-cccCceeEEEE--cCeEEEEEEEeccCCcccccccccCch
Q 004411 236 VR-DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNY-ESKRGYIGLDY--FGRTVSIKILPVGIHMGQFESIMSLDV 311 (755)
Q Consensus 236 ~~-~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~-~~~~~~~~i~~--~gr~~~i~v~p~GId~~~f~~~~~~~~ 311 (755)
.+ ..-+..|-.||.|.-.|+.....-...+.. .+.-. -+..+...+.. .....++.++|+|+|++.|.+......
T Consensus 441 ~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~ 519 (784)
T TIGR02470 441 CQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEK 519 (784)
T ss_pred hhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhh
Confidence 01 001245667999988886432211111100 00000 00001111110 111247889999999999977432110
Q ss_pred hH-HHH----------HHHHHHc-----CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC--
Q 004411 312 TG-QKV----------KELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARS-- 373 (755)
Q Consensus 312 ~~-~~~----------~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~-- 373 (755)
.. ... ...++.+ +++++|++|||+++.||+..+++||.++.+..+ .+.||+||++...
T Consensus 520 r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~~~ 595 (784)
T TIGR02470 520 RLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDAKE 595 (784)
T ss_pred hhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCccccc
Confidence 00 000 0112333 378999999999999999999999987643333 3558888864321
Q ss_pred -CchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH-h---CcEEEEcCCCcCCCccceeeeecccC
Q 004411 374 -SGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA-I---AECCVVNCVRDGMNLVPYKYTVSRQG 448 (755)
Q Consensus 374 -~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~-~---ADv~vvtS~~EG~nLv~~Ea~a~~~~ 448 (755)
...+..+..+++.+++++.+.. + .|.|++...+..++..+|+ + +||||+||.+||||||++||||||.
T Consensus 596 s~d~ee~~~i~~L~~la~~~gL~-g-----~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGl- 668 (784)
T TIGR02470 596 SKDREEQAEIEKMHNLIDQYQLH-G-----QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGL- 668 (784)
T ss_pred ccchhHHHHHHHHHHHHHHhCCC-C-----eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCC-
Confidence 1112223345666777665322 2 3776653346667777776 2 4699999999999999999999975
Q ss_pred CCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHhhHh
Q 004411 449 SPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQ---MENQEKILRHEKHYKYI 522 (755)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v 522 (755)
|+|+|..+|+.+.+. +|++|+|.|++++|++|.++++ ..++.++...++++++|
T Consensus 669 --------------------PVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV 728 (784)
T TIGR02470 669 --------------------PTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRI 728 (784)
T ss_pred --------------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 899999999999883 5999999999999999999874 24455666667778887
Q ss_pred -hhcCHHHHHHHHHHHH
Q 004411 523 -SSHDVAYWAKSIDQDL 538 (755)
Q Consensus 523 -~~~~~~~W~~~~l~~l 538 (755)
+.++|...++++++-.
T Consensus 729 ~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 729 YEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHhCCHHHHHHHHHHHH
Confidence 5689999888887554
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=8e-23 Score=228.35 Aligned_cols=289 Identities=14% Similarity=0.132 Sum_probs=196.8
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCc--hhh-hh-cCCCh--------HH---HHHHhhhCCE
Q 004411 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPS--SEI-YR-TLPVR--------DE---ILKSLLNSDL 249 (755)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~-~r-~lp~~--------~~---il~~ll~~Dl 249 (755)
+.++| |+|+.| +.+....++++.+|+++++.+.|..+-. .+. |. ..+.+ .. ....+-.+|.
T Consensus 84 ~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 159 (396)
T cd03818 84 KGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADA 159 (396)
T ss_pred cCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCE
Confidence 33445 899999 4555666799999999988777643311 110 10 11111 11 2234566777
Q ss_pred EEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCc
Q 004411 250 IGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGK 326 (755)
Q Consensus 250 igf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 326 (755)
+...+....+.|.. .. ..++.++|+|||.+.|.+... . ...++... .++
T Consensus 160 vi~~s~~~~~~~~~--------------------~~--~~ki~vI~ngvd~~~f~~~~~---~---~~~~~~~~~~~~~~ 211 (396)
T cd03818 160 GVSPTRWQRSTFPA--------------------EL--RSRISVIHDGIDTDRLRPDPQ---A---RLRLPNGRVLTPGD 211 (396)
T ss_pred EECCCHHHHhhCcH--------------------hh--ccceEEeCCCccccccCCCch---h---hhcccccccCCCCC
Confidence 77666543333221 01 136888999999999876321 1 11122111 467
Q ss_pred eEEEEecc-ccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEE
Q 004411 327 IVILGVDD-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIV 405 (755)
Q Consensus 327 ~vil~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~ 405 (755)
++|+++|| +.+.||+..+++|+.++.+++|+++ |+++|......+...+......+++.++++.+.+. ..|+
T Consensus 212 ~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~V~ 284 (396)
T cd03818 212 EVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDL---SRVH 284 (396)
T ss_pred eEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCc---ceEE
Confidence 89999998 9999999999999999998899877 88888532111100000000111223333322221 2466
Q ss_pred EecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--
Q 004411 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-- 483 (755)
Q Consensus 406 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-- 483 (755)
|+ |.++.+++.++|+.|||+++||..||+|++++||||||. |+|+|..+|..+.+.
T Consensus 285 f~-G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~---------------------PVIas~~~g~~e~i~~~ 342 (396)
T cd03818 285 FL-GRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC---------------------LVVGSDTAPVREVITDG 342 (396)
T ss_pred Ee-CCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC---------------------CEEEcCCCCchhhcccC
Confidence 54 689999999999999999999999999999999999975 899999999888884
Q ss_pred -CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHHHHH
Q 004411 484 -GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSID 535 (755)
Q Consensus 484 -~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l 535 (755)
+|++|+|.|++++|++|.++++++ +++..+.++.++++.+ +++..-+++++
T Consensus 343 ~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 343 ENGLLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 489999999999999999999875 4667777788998877 77776666654
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-22 Score=225.96 Aligned_cols=275 Identities=16% Similarity=0.133 Sum_probs=200.2
Q ss_pred CCEEEEeCCccchHHHHHHhh-cCCCeEEEEEecCCCc-hhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKR-FHRVKVGFFLHSPFPS-SEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRM 268 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfP~-~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~ 268 (755)
.|+|+.|..+.-.+..++++. ..+.++.+++|.+-.. ..+.. ..+..+-+.+-.+|.|...+....+.+.+
T Consensus 119 ~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----- 191 (406)
T PRK15427 119 ADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK----- 191 (406)
T ss_pred CCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 499999988776667777663 2244667788965221 11110 11112223345788888777654444331
Q ss_pred hCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHH
Q 004411 269 LGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAM 348 (755)
Q Consensus 269 lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~ 348 (755)
.|. ...+|.++|+|||++.|.+... ....+...|++|||+.+.||+..+++|+
T Consensus 192 ~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~ 244 (406)
T PRK15427 192 MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEAC 244 (406)
T ss_pred cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHH
Confidence 121 1236778999999998864211 0123456799999999999999999999
Q ss_pred HHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEE
Q 004411 349 GQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVV 428 (755)
Q Consensus 349 ~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 428 (755)
+.+.+++|+++ |+++| +|+.. +++++++++.+.. ..+.+.|.++.+|+.++|+.||+||+
T Consensus 245 ~~l~~~~~~~~----l~ivG-----~G~~~----~~l~~~~~~~~l~-------~~V~~~G~~~~~el~~~l~~aDv~v~ 304 (406)
T PRK15427 245 RQLKEQGVAFR----YRILG-----IGPWE----RRLRTLIEQYQLE-------DVVEMPGFKPSHEVKAMLDDADVFLL 304 (406)
T ss_pred HHHHhhCCCEE----EEEEE-----CchhH----HHHHHHHHHcCCC-------CeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 99988888765 88887 34433 4455555554321 23445679999999999999999999
Q ss_pred cCCC------cCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHH
Q 004411 429 NCVR------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADA 499 (755)
Q Consensus 429 tS~~------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~a 499 (755)
||.. |||+++.+||||||. |+|+|..+|+.+.+. +|++|+|.|++++|++
T Consensus 305 pS~~~~~g~~Eg~p~~llEAma~G~---------------------PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~a 363 (406)
T PRK15427 305 PSVTGADGDMEGIPVALMEAMAVGI---------------------PVVSTLHSGIPELVEADKSGWLVPENDAQALAQR 363 (406)
T ss_pred CCccCCCCCccCccHHHHHHHhCCC---------------------CEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHH
Confidence 9984 999999999999975 899999999998883 4899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHHHHH
Q 004411 500 MDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLER 540 (755)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 540 (755)
|.+++++++++++.+.++.++++. ++++...++++.+-+++
T Consensus 364 i~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 364 LAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999667778888888998885 58998888888766543
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=228.23 Aligned_cols=170 Identities=19% Similarity=0.286 Sum_probs=135.2
Q ss_pred HHhhccCceEEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceE
Q 004411 578 SAYNKTNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (755)
Q Consensus 578 ~~y~~s~~rlI~lD~DGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~ 655 (755)
.+|.++++++|||||||||+|+. |....+++++.++|++|+++ ..|+|+|||+++.|+++++. ++++++|+||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 47889999999999999999976 46789999999999999985 47999999999999999975 569999999999
Q ss_pred EEecCC----CceeEccc------------CcCccHHHHHHHHHHH---HhcCCCCcEEeecceEEEEEeccCCCCcchh
Q 004411 656 TRWSKN----SAWEICSL------------TRDFDWKEIAEPVMKL---YTETTDGSFIEDKETAIVWHHQHADPHFGSC 716 (755)
Q Consensus 656 i~~~~~----~~w~~~~~------------~~~~~w~~~v~~i~~~---y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~ 716 (755)
++.+.+ ..|..+.. .....|.+.+.++++. ++.+++|++||+|+++++||||+++++++..
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 986421 12221100 1235677666666655 5677899999999999999999998877655
Q ss_pred hHHHHHHHHHHHhcCCC-eEEEecCeEEEEEe-CCCCCCC
Q 004411 717 QAKELLDHLENVLANEP-VVVKRGQHIVEVKP-QVCQHQS 754 (755)
Q Consensus 717 qa~el~~~L~~~l~~~~-~~V~sG~~~VEV~p-~gvnKG~ 754 (755)
++.++...+. +.+ +.+..|++++||+| .++|||.
T Consensus 269 ~~~~l~~~l~----~~~~l~v~~Gk~vlEVrP~~g~~KG~ 304 (384)
T PLN02580 269 VAQCVHDVLK----KYPRLRLTHGRKVLEVRPVIDWNKGK 304 (384)
T ss_pred HHHHHHHHHH----hCCceEEEeCCeEEEEecCCCCCHHH
Confidence 5555554443 444 88999999999999 5999984
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-22 Score=232.59 Aligned_cols=332 Identities=15% Similarity=0.164 Sum_probs=208.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCC----Cchh--------hhhcC
Q 004411 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPF----PSSE--------IYRTL 234 (755)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e--------~~r~l 234 (755)
+.|..-.+.+...++.+.......-|+|+-|++.-.+++..|+++. ++|.+++.|+-= +.++ -|+..
T Consensus 385 ~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~ 463 (815)
T PLN00142 385 DVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFS 463 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhh
Confidence 4566666666666666544333123999999888878888888876 799999999431 1111 11100
Q ss_pred -CChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccC-----c----eeEEEEcCeEEEEEEEeccCCccccc
Q 004411 235 -PVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKR-----G----YIGLDYFGRTVSIKILPVGIHMGQFE 304 (755)
Q Consensus 235 -p~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~-----~----~~~i~~~gr~~~i~v~p~GId~~~f~ 304 (755)
....|. ..|-.||.|.-.|+.-....-. ++ + .|++-. + .-++++.. -++.++|+|+|++.|.
T Consensus 464 ~r~~aE~-~a~~~Ad~IIasT~qEi~g~~~---~i-~-qy~sh~~f~~p~L~rvv~GId~~~--~ki~VVppGvD~~~F~ 535 (815)
T PLN00142 464 CQFTADL-IAMNHADFIITSTYQEIAGSKD---TV-G-QYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSIYF 535 (815)
T ss_pred hchHHHH-HHHHhhhHHHhCcHHHHhcccc---hh-h-hhhcccccccchhhhhhccccccc--cCeeEECCCCChhhcC
Confidence 011111 1455666665555432211100 00 0 010100 0 00111112 2788899999999987
Q ss_pred ccccCch--------hHHHH---HHHHHHc-----CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 004411 305 SIMSLDV--------TGQKV---KELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQIT 368 (755)
Q Consensus 305 ~~~~~~~--------~~~~~---~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 368 (755)
+...... ..+.. ...++.+ +++++|++|||+++.||+..+++||.++.+..+++ .|++||
T Consensus 536 P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~----~LVIVG 611 (815)
T PLN00142 536 PYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELV----NLVVVG 611 (815)
T ss_pred CCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCc----EEEEEE
Confidence 5421100 00000 0011112 35779999999999999999999999886665554 488888
Q ss_pred cCC-CCCchhH--HHHHHHHHHHHHHHhcccCCCCCccEEEecC---CCChhhHHHHHH-hCcEEEEcCCCcCCCcccee
Q 004411 369 NPA-RSSGKDV--QDLLSDTNRIAEEINLNFGKPGYEPIVIIKE---PLSTQDKVPYYA-IAECCVVNCVRDGMNLVPYK 441 (755)
Q Consensus 369 ~p~-r~~~~~~--~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~---~v~~~el~aly~-~ADv~vvtS~~EG~nLv~~E 441 (755)
++. .....+. .+..+++.+++++.+.. + .|.|++. ..+.++++.+|+ ++||||+||.+||||++++|
T Consensus 612 gg~d~~~s~d~ee~~el~~L~~La~~lgL~-~-----~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLE 685 (815)
T PLN00142 612 GFIDPSKSKDREEIAEIKKMHSLIEKYNLK-G-----QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVE 685 (815)
T ss_pred CCccccccccHHHHHHHHHHHHHHHHcCCC-C-----cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHH
Confidence 641 1111111 12224566666664322 2 3666542 345577888777 57999999999999999999
Q ss_pred eeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhc---CCHHHHHHHH
Q 004411 442 YTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQ---MENQEKILRH 515 (755)
Q Consensus 442 a~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~---m~~~er~~r~ 515 (755)
|||||. |+|+|..+|+.+.+. +|++|+|.|++++|++|.+++. ..++.++...
T Consensus 686 AMA~Gl---------------------PVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg 744 (815)
T PLN00142 686 AMTCGL---------------------PTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKIS 744 (815)
T ss_pred HHHcCC---------------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 999975 899999999999883 4999999999999999987653 3455666667
Q ss_pred HHHhhHh-hhcCHHHHHHHHHHHH
Q 004411 516 EKHYKYI-SSHDVAYWAKSIDQDL 538 (755)
Q Consensus 516 ~~~~~~v-~~~~~~~W~~~~l~~l 538 (755)
+++++++ +.++|...++++++-.
T Consensus 745 ~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 745 DAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHH
Confidence 7788888 5689999888887643
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.6e-22 Score=226.36 Aligned_cols=282 Identities=15% Similarity=0.193 Sum_probs=199.3
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCCh-H---HHHHHh-hhCCEEEEeCHHHHH
Q 004411 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR-D---EILKSL-LNSDLIGFHTFDYAR 259 (755)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~-~---~il~~l-l~~Dligf~t~~~~~ 259 (755)
+..+| |+|++|+...+..+.++-.+..++|++++.|.-+|..--....++. + .+.+.+ ..+|.|...+....+
T Consensus 141 ~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~ 218 (465)
T PLN02871 141 ARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGK 218 (465)
T ss_pred HhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHH
Confidence 33455 9999998766655554433344788988898755432110011110 0 111222 357888887776665
Q ss_pred HHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc----CCceEEEEeccc
Q 004411 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF----DGKIVILGVDDM 335 (755)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vil~VdRl 335 (755)
.+.. .+. ....++.++|+|||.+.|.+.... ..+++++ +++++|+++||+
T Consensus 219 ~l~~-----~~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl 272 (465)
T PLN02871 219 ELEA-----AGV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRL 272 (465)
T ss_pred HHHH-----cCC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCC
Confidence 5542 110 012367889999999998754221 1233333 367899999999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhh
Q 004411 336 DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415 (755)
Q Consensus 336 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 415 (755)
.+.||+..+++|++++ |+++ |+++| +|+.. +++++++... +|+|+ |.++.+|
T Consensus 273 ~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~----~~l~~~~~~~----------~V~f~-G~v~~~e 324 (465)
T PLN02871 273 GAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYR----EELEKMFAGT----------PTVFT-GMLQGDE 324 (465)
T ss_pred chhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHH----HHHHHHhccC----------CeEEe-ccCCHHH
Confidence 9999999999988653 6554 88887 34433 3444444321 36654 6899999
Q ss_pred HHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC------CcEEeC
Q 004411 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS------GAIRVN 489 (755)
Q Consensus 416 l~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------~ai~Vn 489 (755)
+..+|+.||+||+||..||||++++||||||. |+|+|..+|+.+.+. +|++++
T Consensus 325 v~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~---------------------PVI~s~~gg~~eiv~~~~~~~~G~lv~ 383 (465)
T PLN02871 325 LSQAYASGDVFVMPSESETLGFVVLEAMASGV---------------------PVVAARAGGIPDIIPPDQEGKTGFLYT 383 (465)
T ss_pred HHHHHHHCCEEEECCcccccCcHHHHHHHcCC---------------------CEEEcCCCCcHhhhhcCCCCCceEEeC
Confidence 99999999999999999999999999999975 899999999888773 389999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHH-HHHHHHh
Q 004411 490 PWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD-LERACRD 544 (755)
Q Consensus 490 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~~~ 544 (755)
|.|++++|++|.++++.+ +.++.+.++.++++.+++|...++++++. ..++...
T Consensus 384 ~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 384 PGDVDDCVEKLETLLADP-ELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred CCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999854 56667777888899999999999999874 4444443
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.9e-22 Score=226.69 Aligned_cols=310 Identities=17% Similarity=0.191 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhc-----CCCeEEEEEecCCCch----hhhhcC--CC---
Q 004411 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRF-----HRVKVGFFLHSPFPSS----EIYRTL--PV--- 236 (755)
Q Consensus 171 ~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~~r~l--p~--- 236 (755)
.|.-.++...+.+... ...-|+|++||+|..++|.++++.. .++|++|+.|.+.+.. ..+..+ ++
T Consensus 111 ~~~~f~~~~~~~l~~~-~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~ 189 (476)
T cd03791 111 RFALFSRAALELLRRL-GWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEEL 189 (476)
T ss_pred HHHHHHHHHHHHHHhc-CCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccch
Confidence 3443444444443332 1224999999999999999998874 5789999999874321 111111 11
Q ss_pred ----------h-HHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEE--EcCeEEEEEEEeccCCcccc
Q 004411 237 ----------R-DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD--YFGRTVSIKILPVGIHMGQF 303 (755)
Q Consensus 237 ----------~-~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~--~~gr~~~i~v~p~GId~~~f 303 (755)
. .-+..++..||.|...+..+++..++.- .| . +++ ...+..++.++|+|||.+.|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~---~~------~---gl~~~~~~~~~ki~~I~NGid~~~~ 257 (476)
T cd03791 190 FHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE---FG------E---GLDGLLRARAGKLSGILNGIDYDVW 257 (476)
T ss_pred hhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC---CC------c---chHHHHHhccCCeEEEeCCCcCccc
Confidence 0 1222345667777776766665543210 00 0 000 11223578899999999998
Q ss_pred cccccCc-----------hhHHHHHHHHHHc-----CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 004411 304 ESIMSLD-----------VTGQKVKELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQI 367 (755)
Q Consensus 304 ~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 367 (755)
.+..... ........+++++ +++++|+++||+.+.||+..+++|++++.++. +.|+++
T Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~ 331 (476)
T cd03791 258 NPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVIL 331 (476)
T ss_pred CccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEE
Confidence 7643210 0112234466666 36789999999999999999999999987643 447777
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeeccc
Q 004411 368 TNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (755)
Q Consensus 368 ~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 447 (755)
|.. + .++.+++.+++.+.. ..|+++.+ .+.+++..+|+.||++++||..||||++.+|||+||.
T Consensus 332 G~g-----~--~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~ 395 (476)
T cd03791 332 GSG-----D--PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGT 395 (476)
T ss_pred ecC-----C--HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCC
Confidence 742 1 134455666655431 13666654 4577788999999999999999999999999999975
Q ss_pred CCCccccccCCCCCCCCCCCceEEEeCCCCccccc-C--------CcEEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHH
Q 004411 448 GSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--------GAIRVNPWNVDAVADAMDSALQME--NQEKILRHE 516 (755)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~ai~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~ 516 (755)
|+|+|..+|..+.+ + +|++++|.|+++++++|.+++.+. ++++..+.+
T Consensus 396 ---------------------pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~ 454 (476)
T cd03791 396 ---------------------VPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQR 454 (476)
T ss_pred ---------------------CCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 88999999999988 3 599999999999999999998643 233333333
Q ss_pred HHhhHhhhcCHHHHHHHHHHHH
Q 004411 517 KHYKYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 517 ~~~~~v~~~~~~~W~~~~l~~l 538 (755)
+..+ ..+++..-++++++-.
T Consensus 455 ~~~~--~~fsw~~~a~~~~~~y 474 (476)
T cd03791 455 NAMA--QDFSWDRSAKEYLELY 474 (476)
T ss_pred HHhc--cCCChHHHHHHHHHHH
Confidence 3222 3467777777776543
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.2e-22 Score=221.38 Aligned_cols=276 Identities=13% Similarity=0.170 Sum_probs=196.0
Q ss_pred CEEEEeCCccchH-HHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHH-hhhCCEEEEeCHHHHHHHHHHHhhHh
Q 004411 192 DYVWIHDYHLMVL-PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKS-LLNSDLIGFHTFDYARHFLSSCSRML 269 (755)
Q Consensus 192 DiVwvhDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~-ll~~Dligf~t~~~~~~Fl~~~~r~l 269 (755)
|+|++|+++.... ...+-.+..++|++++.|..|+..+... .....+.+. +-.+|.+.+.+....+.+... .
T Consensus 90 DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~----~ 163 (398)
T cd03796 90 TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENTVLR----A 163 (398)
T ss_pred CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHHHHH----h
Confidence 9999999875533 2333333446899999998765322211 011222222 346788888887665554321 0
Q ss_pred CccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHH
Q 004411 270 GLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMG 349 (755)
Q Consensus 270 g~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~ 349 (755)
+ ....++.++|+|+|++.|.+... . ..+++++|+++||+.+.||+..+++|+.
T Consensus 164 ~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~~~li~a~~ 216 (398)
T cd03796 164 S---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGIDLLVGIIP 216 (398)
T ss_pred C---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCHHHHHHHHH
Confidence 1 11346788999999998865311 0 1256789999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEc
Q 004411 350 QLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVN 429 (755)
Q Consensus 350 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt 429 (755)
.+.+++|+++ |+++|. ++.. +++.+++++.+. .+ .|.++ |.++.+++.++|+.||++++|
T Consensus 217 ~l~~~~~~~~----l~i~G~-----g~~~----~~l~~~~~~~~l----~~--~v~~~-G~~~~~~~~~~l~~ad~~v~p 276 (398)
T cd03796 217 EICKKHPNVR----FIIGGD-----GPKR----ILLEEMREKYNL----QD--RVELL-GAVPHERVRDVLVQGHIFLNT 276 (398)
T ss_pred HHHhhCCCEE----EEEEeC-----CchH----HHHHHHHHHhCC----CC--eEEEe-CCCCHHHHHHHHHhCCEEEeC
Confidence 9988888766 887873 3333 334455544321 11 36655 689999999999999999999
Q ss_pred CCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-C-cEEeCCCCHHHHHHHHHHHhcCC
Q 004411 430 CVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-G-AIRVNPWNVDAVADAMDSALQME 507 (755)
Q Consensus 430 S~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-ai~VnP~d~~~~A~ai~~aL~m~ 507 (755)
|..||||++.+||||||. |+|+|..+|..+.+. + +++++| |.++++++|.+++.++
T Consensus 277 S~~E~~g~~~~EAma~G~---------------------PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 277 SLTEAFCIAIVEAASCGL---------------------LVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISIL 334 (398)
T ss_pred ChhhccCHHHHHHHHcCC---------------------CEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhCh
Confidence 999999999999999975 899999999988884 4 445555 9999999999999976
Q ss_pred HHHHHHHHHHHhhHh-hhcCHHHHHHHHHHHHHHHHH
Q 004411 508 NQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLERACR 543 (755)
Q Consensus 508 ~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~ 543 (755)
.+. ....+..++++ ..+++..-++++++..+++..
T Consensus 335 ~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 335 RTG-KHDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred hhh-hhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 533 33445555655 458889889998888777543
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.8e-23 Score=221.15 Aligned_cols=169 Identities=21% Similarity=0.320 Sum_probs=135.1
Q ss_pred HHhhccCceEEEecCCCcCCCCCC--CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceE
Q 004411 578 SAYNKTNSRLILLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (755)
Q Consensus 578 ~~y~~s~~rlI~lD~DGTL~~~~~--~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~ 655 (755)
.++.+.++.+||+||||||+|+.. ....+++++.++|++|++ +..|+|+|||++..+.++++ +.+++++|+||++
T Consensus 104 ~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~hGa~ 180 (366)
T PLN03017 104 MEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVK-LAELYYAGSHGMD 180 (366)
T ss_pred HHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhc-ccCceEEEcCCcE
Confidence 344566889999999999998764 344799999999999994 68899999999999999975 4679999999999
Q ss_pred EEecCCCceeEc-------ccCcCccHHHHHHHH---HHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHH
Q 004411 656 TRWSKNSAWEIC-------SLTRDFDWKEIAEPV---MKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHL 725 (755)
Q Consensus 656 i~~~~~~~w~~~-------~~~~~~~w~~~v~~i---~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L 725 (755)
++.+++ .|... .......|++.+.++ ++.++++++|++||+|+++++||||+++++ .+.++..++
T Consensus 181 i~~p~~-~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~~~~ 255 (366)
T PLN03017 181 IKGPAK-GFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELVLQV 255 (366)
T ss_pred EecCCC-cceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHHHHH
Confidence 987643 33210 011234577777766 556778999999999999999999999764 345777778
Q ss_pred HHHhcCCC-eEEEecCeEEEEEeC-CCCCCC
Q 004411 726 ENVLANEP-VVVKRGQHIVEVKPQ-VCQHQS 754 (755)
Q Consensus 726 ~~~l~~~~-~~V~sG~~~VEV~p~-gvnKG~ 754 (755)
.+.+.+.+ +.+..|++++||+|. ++|||.
T Consensus 256 ~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~ 286 (366)
T PLN03017 256 RSVLKNFPTLKLTQGRKVFEIRPMIEWDKGK 286 (366)
T ss_pred HHHHHhCCCcEEeCCCeEEEecCCCCCCHHH
Confidence 77777766 889999999999995 999995
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-21 Score=215.32 Aligned_cols=284 Identities=14% Similarity=0.113 Sum_probs=203.9
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhh-----cCCChHHH-HHHhhhCCEEEEeCHHHHHHHHHH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR-----TLPVRDEI-LKSLLNSDLIGFHTFDYARHFLSS 264 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r-----~lp~~~~i-l~~ll~~Dligf~t~~~~~~Fl~~ 264 (755)
.|+|++|++...+.+.+++ +..+.|+++++|..+|...... .......+ ...+..+|.|...+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 5999999988776655554 3457889999998765321100 00011111 123456788888877666655431
Q ss_pred HhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCCh
Q 004411 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI 341 (755)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi 341 (755)
- -+. ...++.++|+|+|++.|.+.. ...+++++ .++++|+++||+.+.||+
T Consensus 163 ~---~~~---------------~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PDL---------------DPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CCC---------------CcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 011 134678899999998886421 12334444 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004411 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (755)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (755)
..+++|++++. ++.+ |+++|.. ++..++.+++++++..++...+ .|+++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~~----l~i~g~g-----~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDVQ----VVLCAGA-----PDTPEVAEEVRQAVALLDRNRT-----GIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcCc----EEEEeCC-----CCcHHHHHHHHHHHHHhccccC-----ceEEecCCCCHHHHHHHHH
Confidence 99999999873 3433 6666532 2223445566666655543221 3788888999999999999
Q ss_pred hCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCH-----
Q 004411 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV----- 493 (755)
Q Consensus 422 ~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~----- 493 (755)
.|||+|+||..||||++.+|||+||. |+|+|..+|..+.+. .|++++|.|.
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~G~---------------------PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~ 338 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMACGT---------------------PVVASATGGIPEVVVDGETGFLVPPDNSDADGF 338 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHcCC---------------------CEEEeCCCCHHHHhhCCCceEEcCCCCCcccch
Confidence 99999999999999999999999975 899999999888873 4899999999
Q ss_pred -HHHHHHHHHHhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHHHHHHH
Q 004411 494 -DAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 494 -~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 540 (755)
++++++|.++++. ++++..+.++.++++ .++++..+++++++.+++
T Consensus 339 ~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 339 QAELAKAINILLAD-PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999986 446666667777776 468999999998877664
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-21 Score=212.54 Aligned_cols=285 Identities=18% Similarity=0.158 Sum_probs=202.8
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhc-----CCC-hHHH-HHHhhhCCEEEEeCHHHHHHHHH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT-----LPV-RDEI-LKSLLNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~-----lp~-~~~i-l~~ll~~Dligf~t~~~~~~Fl~ 263 (755)
.|+|++|++....++..+.+. .++++.++.|........... .+. +..+ ...+..+|.|.+.+......+..
T Consensus 102 ~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 180 (398)
T cd03800 102 PDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYS 180 (398)
T ss_pred ccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHH
Confidence 399999998877776666554 478899999975432110000 000 1111 22345789999988876666543
Q ss_pred HHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHH
Q 004411 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISL 343 (755)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~ 343 (755)
. .+ ....++.++|+|+|.+.|.+.... ....+++. ...++.+|+++||+++.||+..
T Consensus 181 ~----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~ 237 (398)
T cd03800 181 L----YG---------------AYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVGRLDPRKGIDT 237 (398)
T ss_pred H----cc---------------ccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEcccccccCHHH
Confidence 1 11 112347889999999888654221 11111111 1146789999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhC
Q 004411 344 KFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA 423 (755)
Q Consensus 344 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~A 423 (755)
+++|+..+.+++|+++ |+++|....... .....+++.++++.+.. ..|. +.+.++.+++..+|+.|
T Consensus 238 ll~a~~~l~~~~~~~~----l~i~G~~~~~~~---~~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~a 303 (398)
T cd03800 238 LIRAYAELPELRERAN----LVIVGGPRDDIL---AMDEEELRELARELGVI------DRVD-FPGRVSREDLPALYRAA 303 (398)
T ss_pred HHHHHHHHHHhCCCeE----EEEEECCCCcch---hhhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHHHHHhC
Confidence 9999999988877765 888885432221 22233455565554321 1355 45789999999999999
Q ss_pred cEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHH
Q 004411 424 ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAM 500 (755)
Q Consensus 424 Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai 500 (755)
|++++||..||||++++|||+||. |+|+|+.+|..+.+. .|++++|.|+++++++|
T Consensus 304 di~l~ps~~e~~~~~l~Ea~a~G~---------------------Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i 362 (398)
T cd03800 304 DVFVNPALYEPFGLTALEAMACGL---------------------PVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAAL 362 (398)
T ss_pred CEEEecccccccCcHHHHHHhcCC---------------------CEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHH
Confidence 999999999999999999999975 899999999988883 48999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHH
Q 004411 501 DSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSID 535 (755)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 535 (755)
.++++++ ++++.+.++.++++ +.+++...+++++
T Consensus 363 ~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 363 RRLLTDP-ALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 9999874 46666677788888 7789999888775
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-21 Score=211.25 Aligned_cols=231 Identities=13% Similarity=0.118 Sum_probs=171.8
Q ss_pred hCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--
Q 004411 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-- 323 (755)
Q Consensus 246 ~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 323 (755)
.+|.+...+....+.+... .+. ...++.++|+|||++.|.+.... . ....++.+
T Consensus 136 ~~~~~i~vs~~~~~~~~~~----~~~---------------~~~~~~vi~ngvd~~~~~~~~~~---~--~~~~~~~~~~ 191 (374)
T TIGR03088 136 LIHHYVAVSRDLEDWLRGP----VKV---------------PPAKIHQIYNGVDTERFHPSRGD---R--SPILPPDFFA 191 (374)
T ss_pred cCCeEEEeCHHHHHHHHHh----cCC---------------ChhhEEEeccCccccccCCCccc---h--hhhhHhhcCC
Confidence 3677777777666555431 121 13467789999999988653211 1 11112222
Q ss_pred CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004411 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~p 403 (755)
.++.+|+++||+++.||+..+++|+..+++++|+...++.|+++|. |+.. +++++++.+.+. ..
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~----~~~~~~~~~~~~-------~~ 255 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPAR----GACEQMVRAAGL-------AH 255 (374)
T ss_pred CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchH----HHHHHHHHHcCC-------cc
Confidence 4678999999999999999999999999999987666678998883 3332 334445444322 13
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (755)
.+++.+ +.+++..+|+.||++|+||..||||++++|||+||. |+|+|+.+|..+.+.
T Consensus 256 ~v~~~g--~~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~---------------------Pvv~s~~~g~~e~i~ 312 (374)
T TIGR03088 256 LVWLPG--ERDDVPALMQALDLFVLPSLAEGISNTILEAMASGL---------------------PVIATAVGGNPELVQ 312 (374)
T ss_pred eEEEcC--CcCCHHHHHHhcCEEEeccccccCchHHHHHHHcCC---------------------CEEEcCCCCcHHHhc
Confidence 444555 367899999999999999999999999999999975 899999999998883
Q ss_pred ---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHHHHHHH
Q 004411 484 ---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 484 ---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 540 (755)
.|++++|.|++++|++|.++++.+ +++..+.++.++++ ..+++..-++++.+-..+
T Consensus 313 ~~~~g~~~~~~d~~~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 313 HGVTGALVPPGDAVALARALQPYVSDP-AARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 489999999999999999999854 45666677888887 578988888888766543
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-21 Score=221.82 Aligned_cols=276 Identities=14% Similarity=0.125 Sum_probs=195.4
Q ss_pred CCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCch---hhhhc---CCChHHH--------HH-HhhhCCEEEEe
Q 004411 189 PDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS---EIYRT---LPVRDEI--------LK-SLLNSDLIGFH 253 (755)
Q Consensus 189 ~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~r~---lp~~~~i--------l~-~ll~~Dligf~ 253 (755)
++.|+||+|......++..+.++..+.|+.++.|--++.. ++... .+..+.+ .+ ....||.|...
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~ 251 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTL 251 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEec
Confidence 3569999998765545555444455789999999766531 22211 0000111 11 12345666554
Q ss_pred CHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEec
Q 004411 254 TFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVD 333 (755)
Q Consensus 254 t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~Vd 333 (755)
+....+... .++....++.++|+|||++.|.+.... ....++++|+++|
T Consensus 252 s~~~~~~~~--------------------~~g~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~vG 300 (475)
T cd03813 252 YEGNRERQI--------------------EDGADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGLIG 300 (475)
T ss_pred CHHHHHHHH--------------------HcCCCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEEEe
Confidence 443222111 111223467889999999988653210 1125678999999
Q ss_pred cccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCCh
Q 004411 334 DMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLST 413 (755)
Q Consensus 334 Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~ 413 (755)
|+.+.||+..+++|++.+.++.|+++ |+++|.. ++..++.+++++++++.+.. ..|.|++ .
T Consensus 301 rl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g-----~~~~~~~~e~~~li~~l~l~------~~V~f~G----~ 361 (475)
T cd03813 301 RVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPT-----DEDPEYAEECRELVESLGLE------DNVKFTG----F 361 (475)
T ss_pred ccccccCHHHHHHHHHHHHHhCCCeE----EEEECCC-----CcChHHHHHHHHHHHHhCCC------CeEEEcC----C
Confidence 99999999999999999998888866 8877742 22234567788888776532 1366654 6
Q ss_pred hhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-C--------C
Q 004411 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--------G 484 (755)
Q Consensus 414 ~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~ 484 (755)
+++..+|+.||++|+||..|||+++++||||||. |+|+|+.+|+.+.+ . +
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~---------------------PVVatd~g~~~elv~~~~~~~~g~~ 420 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI---------------------PVVATDVGSCRELIEGADDEALGPA 420 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC---------------------CEEECCCCChHHHhcCCcccccCCc
Confidence 7899999999999999999999999999999975 89999999998887 3 4
Q ss_pred cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHHHHHH
Q 004411 485 AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQ 536 (755)
Q Consensus 485 ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~ 536 (755)
|++++|.|++++|++|.++++.+ +.+....+..++++.+ +++...+++|.+
T Consensus 421 G~lv~~~d~~~la~ai~~ll~~~-~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 421 GEVVPPADPEALARAILRLLKDP-ELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred eEEECCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 89999999999999999999864 4667777778888876 466777776654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-20 Score=205.47 Aligned_cols=280 Identities=18% Similarity=0.222 Sum_probs=198.7
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHh-hhCCEEEEeCHHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL-LNSDLIGFHTFDYARH 260 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~l-l~~Dligf~t~~~~~~ 260 (755)
++++..+| |+|++|.+|..++..+++...+..++..+.|...+..-+ +..+.+.. ..++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34455566 899999999888888887776778888888864322111 11111111 1245555555555544
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccc
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL 337 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~ 337 (755)
|+.. + .-...++.++|+|+|...|.+.. .....+++++ +++++++++||+.+
T Consensus 145 ~~~~-----~--------------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIAS-----K--------------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhc-----c--------------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 4431 0 01124678899999998875431 1123455555 46789999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004411 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (755)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 417 (755)
.||+..+++|+.++.+++|+++ |+++|. +++.+ ++.+.+.+.|.. ..|.+++ . .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~----~~~~~~~~~~~~------~~v~~~g-~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRA----TLERLIKALGLS------NRVKLLG-L--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHH----HHHHHHHhcCCC------CcEEEec-c--cccHH
Confidence 9999999999999998888766 887873 33333 334444443321 1366554 3 46899
Q ss_pred HHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHH
Q 004411 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAV 496 (755)
Q Consensus 418 aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~ 496 (755)
.+|+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. +|+.++|.|++++
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~---------------------PvI~~~~~~~~e~i~~~g~~~~~~~~~~~ 316 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMACEL---------------------PVVATDAGGVREVVGDSGLIVPISDPEAL 316 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHcCC---------------------CEEEecCCChhhEecCCceEeCCCCHHHH
Confidence 999999999999999999999999999975 899999998888884 6899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHHHHH
Q 004411 497 ADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDL 538 (755)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 538 (755)
|++|.+++++++..+..+.+. ++++ +.+++..+++.+.+-+
T Consensus 317 ~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 317 ANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHh
Confidence 999999998777666665555 5544 6789999999887654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=206.01 Aligned_cols=274 Identities=16% Similarity=0.158 Sum_probs=193.5
Q ss_pred HHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCC----chhhhhcCCChHHHHHH-hhhCCEEEEeCHHH
Q 004411 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP----SSEIYRTLPVRDEILKS-LLNSDLIGFHTFDY 257 (755)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e~~r~lp~~~~il~~-ll~~Dligf~t~~~ 257 (755)
+++..+| |+|++|+.+..+....+.++ .++|+.+.+|.... .............+.+. +..+|.|.+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLARR-LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHHH-cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4455566 89999977654443334333 46888888884321 11111000011122222 34679888888765
Q ss_pred HHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccc
Q 004411 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337 (755)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~ 337 (755)
.+.+... |. ...++.++|+|+|.+.|.+... -.++++++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeecc
Confidence 5555431 21 1236778999999988764210 134568999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004411 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (755)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 417 (755)
.||+..+++|+..+.+++|+++ |+++|. ++.. ++++.++++.+.. + .|. +.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~----~~~~~~~~~~~~~----~--~v~-~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLL----AALEALARALGLG----G--RVT-FLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHH----HHHHHHHHHcCCC----C--eEE-ECCCCCHHHHH
Confidence 9999999999999988888765 888873 3322 3455555543211 1 255 45689999999
Q ss_pred HHHHhCcEEEEcCC------CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEe
Q 004411 418 PYYAIAECCVVNCV------RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRV 488 (755)
Q Consensus 418 aly~~ADv~vvtS~------~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~V 488 (755)
.+|+.||++++||. .|||+++++|||+||. |+|+|+.+|..+.+. +|+++
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~---------------------PvI~s~~~~~~e~i~~~~~g~~~ 318 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV---------------------PVVATRHGGIPEAVEDGETGLLV 318 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC---------------------CEEEeCCCCchhheecCCeeEEE
Confidence 99999999999997 5999999999999975 899999999988773 58999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHH
Q 004411 489 NPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSID 535 (755)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 535 (755)
+|.|+++++++|.++++.+ +.+.....+.++++. .+++..+++.+.
T Consensus 319 ~~~d~~~l~~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 319 PEGDVAALAAALGRLLADP-DLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 9999999999999999864 456666677888874 689888888765
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-20 Score=202.24 Aligned_cols=268 Identities=16% Similarity=0.233 Sum_probs=193.7
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHH
Q 004411 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSS 264 (755)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~ 264 (755)
+..++ |+|++|..+...+..++.+. .++|+.+.+|-.++....+ .. .+..+|.+.+.+....+.+.
T Consensus 75 ~~~~~--dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~------~~---~~~~~~~vi~~s~~~~~~~~-- 140 (355)
T cd03819 75 REEKV--DIVHARSRAPAWSAYLAARR-TRPPFVTTVHGFYSVNFRY------NA---IMARGDRVIAVSNFIADHIR-- 140 (355)
T ss_pred HHcCC--CEEEECCCchhHHHHHHHHh-cCCCEEEEeCCchhhHHHH------HH---HHHhcCEEEEeCHHHHHHHH--
Confidence 33455 89999987766555554443 4789999999776533211 12 24468888887765554443
Q ss_pred HhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCCh
Q 004411 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI 341 (755)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi 341 (755)
...+. ...++.++|+|||...|.+..... .....+++++ .++++++++||+...||+
T Consensus 141 --~~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~ 200 (355)
T cd03819 141 --ENYGV---------------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKGQ 200 (355)
T ss_pred --HhcCC---------------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccCH
Confidence 11221 124678899999999886542211 1122245555 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004411 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (755)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (755)
..+++|+..+.+++|+++ |+++|... ..+.+.+++.+.+.+.+.. ..|.+++ . .+++..+|+
T Consensus 201 ~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~~~~------~~v~~~g-~--~~~~~~~l~ 262 (355)
T cd03819 201 EVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRLGLQ------DRVTFVG-H--CSDMPAAYA 262 (355)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHcCCc------ceEEEcC-C--cccHHHHHH
Confidence 999999999988766655 88888432 2223444555555443221 1366654 4 779999999
Q ss_pred hCcEEEEcC-CCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHH
Q 004411 422 IAECCVVNC-VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (755)
Q Consensus 422 ~ADv~vvtS-~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A 497 (755)
.||++++|| ..||||++.+||||||. |+|+|..+|..+.+. +|++++|.|+++++
T Consensus 263 ~ad~~i~ps~~~e~~~~~l~EA~a~G~---------------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~ 321 (355)
T cd03819 263 LADIVVSASTEPEAFGRTAVEAQAMGR---------------------PVIASDHGGARETVRPGETGLLVPPGDAEALA 321 (355)
T ss_pred hCCEEEecCCCCCCCchHHHHHHhcCC---------------------CEEEcCCCCcHHHHhCCCceEEeCCCCHHHHH
Confidence 999999999 78999999999999975 899999988888773 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhhHhhhc
Q 004411 498 DAMDSALQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (755)
++|..++..+++++....++.++++.++
T Consensus 322 ~~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 322 QALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 9999888888888888888889888764
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-20 Score=210.51 Aligned_cols=272 Identities=14% Similarity=0.139 Sum_probs=182.0
Q ss_pred CCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCC-------------hH--HH-----------H
Q 004411 188 NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPV-------------RD--EI-----------L 241 (755)
Q Consensus 188 ~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~-------------~~--~i-----------l 241 (755)
.| |+|..|--+...+ .+.+.++++|+++..|.|.-+++.+..+-. +. .+ +
T Consensus 107 ~p--Dv~i~~~g~~~~~--~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~ 182 (419)
T cd03806 107 VP--DIFIDTMGYPFTY--PLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFL 182 (419)
T ss_pred CC--CEEEEcCCcccHH--HHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHH
Confidence 56 6554442233322 345556789999999955434454422111 11 01 1
Q ss_pred H--HhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHH
Q 004411 242 K--SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKEL 319 (755)
Q Consensus 242 ~--~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~l 319 (755)
. .+-.||.|...+....+++.+ ..+ ...++.++|+|+|++.|.+...
T Consensus 183 ~~~~~~~aD~ii~~S~~~~~~~~~----~~~----------------~~~~~~vi~~gvd~~~~~~~~~----------- 231 (419)
T cd03806 183 YGLAGSFADVVMVNSTWTRNHIRS----LWK----------------RNTKPSIVYPPCDVEELLKLPL----------- 231 (419)
T ss_pred HHHHhhcCCEEEECCHHHHHHHHH----HhC----------------cCCCcEEEcCCCCHHHhccccc-----------
Confidence 1 134567777766654444432 111 1125778999999988754210
Q ss_pred HHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 004411 320 KEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGK 398 (755)
Q Consensus 320 r~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~ 398 (755)
....++.+|+++||+.+.||+..+|+||.++.+++|+.. .++.|+++|.... .+..++.+++++++++.+..
T Consensus 232 -~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~---~~~~~~~~~L~~~~~~l~l~--- 304 (419)
T cd03806 232 -DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN---EDDEKRVEDLKLLAKELGLE--- 304 (419)
T ss_pred -ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC---cccHHHHHHHHHHHHHhCCC---
Confidence 012456799999999999999999999999999887631 2466888885321 11123556777777765432
Q ss_pred CCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCc
Q 004411 399 PGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC 478 (755)
Q Consensus 399 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 478 (755)
+ .|+|+ +.++.+++.++|+.||+++.||..||||++++||||||. |+|+|..+|.
T Consensus 305 -~--~V~f~-g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~---------------------pvIa~~~ggp 359 (419)
T cd03806 305 -D--KVEFV-VNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGL---------------------IPLAHASGGP 359 (419)
T ss_pred -C--eEEEe-cCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCC---------------------cEEEEcCCCC
Confidence 1 36655 589999999999999999999999999999999999964 7889988886
Q ss_pred cc-ccC------CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHH
Q 004411 479 SP-SLS------GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVA 528 (755)
Q Consensus 479 ~~-~l~------~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 528 (755)
.+ .+. .|++++ |++++|++|.+++++++++++.+.+..++...+++..
T Consensus 360 ~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 360 LLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred chheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHH
Confidence 54 443 388874 9999999999999998766655433444444455544
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-19 Score=199.88 Aligned_cols=285 Identities=14% Similarity=0.158 Sum_probs=196.4
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhc---CCCeEEEEEecCCCchhhhhcCCChH-HHHHHhhhCCEEEE
Q 004411 177 KVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRF---HRVKVGFFLHSPFPSSEIYRTLPVRD-EILKSLLNSDLIGF 252 (755)
Q Consensus 177 ~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~---~~~~i~~flH~PfP~~e~~r~lp~~~-~il~~ll~~Dligf 252 (755)
+.+.+.+ +..+| |+|++|++....++.++..+. .++++.+++|..-.. ....-+... -+...+..+|.|..
T Consensus 74 ~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~ 148 (371)
T cd04962 74 SKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTA 148 (371)
T ss_pred HHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEE
Confidence 3444444 34455 899999876555555544332 267888888853111 011112112 22334567899999
Q ss_pred eCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEE
Q 004411 253 HTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVI 329 (755)
Q Consensus 253 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vi 329 (755)
.+....+.+.... + ...++.++|+|+|...|.+... ...++++ .+++++
T Consensus 149 ~s~~~~~~~~~~~----~----------------~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i 200 (371)
T cd04962 149 VSESLRQETYELF----D----------------ITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVL 200 (371)
T ss_pred cCHHHHHHHHHhc----C----------------CcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEE
Confidence 9887766654311 1 1235778999999887754211 1233343 468899
Q ss_pred EEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecC
Q 004411 330 LGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKE 409 (755)
Q Consensus 330 l~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~ 409 (755)
+++||+.+.||+..+++|++++.++ ++++ |+++|. +++..+ +.+++.+.+.. + .|.+++
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~~----~~~~~~~~~~~----~--~v~~~g- 259 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKE-VPAR----LLLVGD-----GPERSP----AERLARELGLQ----D--DVLFLG- 259 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhc-CCce----EEEEcC-----CcCHHH----HHHHHHHcCCC----c--eEEEec-
Confidence 9999999999999999999988654 3343 777773 333333 34444443221 1 366664
Q ss_pred CCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcE
Q 004411 410 PLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAI 486 (755)
Q Consensus 410 ~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai 486 (755)
. .+++..+|+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. .|+
T Consensus 260 ~--~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~---------------------PvI~s~~~~~~e~i~~~~~G~ 316 (371)
T cd04962 260 K--QDHVEELLSIADLFLLPSEKESFGLAALEAMACGV---------------------PVVASNAGGIPEVVKHGETGF 316 (371)
T ss_pred C--cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCC---------------------CEEEeCCCCchhhhcCCCceE
Confidence 3 46899999999999999999999999999999975 899999999988883 489
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhH-hhhcCHHHHHHHHHHHHH
Q 004411 487 RVNPWNVDAVADAMDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 487 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~ 539 (755)
+++|.|++++|++|.++++++ +++....++++++ ...+++...++.+.+-++
T Consensus 317 ~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 317 LVDVGDVEAMAEYALSLLEDD-ELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred EcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999999854 4556666677877 456888888888876654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-20 Score=209.21 Aligned_cols=358 Identities=16% Similarity=0.161 Sum_probs=205.4
Q ss_pred ccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEe
Q 004411 144 HYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLH 222 (755)
Q Consensus 144 ~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH 222 (755)
.-||-.|+--. |..+..+++..--.|.. ..|-....+. .....|++|.||++......+||++.++++.+|+.|
T Consensus 106 ~~lW~~~~i~s---~~~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtH 180 (590)
T cd03793 106 GELWELCGIGS---PEGDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTH 180 (590)
T ss_pred HHHHHHcCCCC---CCCCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEec
Confidence 34698888532 22234455443334421 1122222222 112359999999999999999998889999999999
Q ss_pred cCCCchhhhhcCCCh-HHHHHHhhhCCEEEEeC-------HHHHHHHHH-----HHhhHhCccccccCceeEEEEcCeEE
Q 004411 223 SPFPSSEIYRTLPVR-DEILKSLLNSDLIGFHT-------FDYARHFLS-----SCSRMLGLNYESKRGYIGLDYFGRTV 289 (755)
Q Consensus 223 ~PfP~~e~~r~lp~~-~~il~~ll~~Dligf~t-------~~~~~~Fl~-----~~~r~lg~~~~~~~~~~~i~~~gr~~ 289 (755)
- .++-|.+-.. .++-. ++-.|.- .-+.++.++ .+++++.++..+..+. ....++..
T Consensus 181 A----T~~GR~l~~g~~~~y~-----~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E~--~~Ll~~~p 249 (590)
T cd03793 181 A----TLLGRYLCAGNVDFYN-----NLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYEA--EHLLKRKP 249 (590)
T ss_pred c----cccccccccCCcccch-----hhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHHH--HHHhCCCC
Confidence 4 3444431110 00000 0000000 001122111 1222222221111110 11223332
Q ss_pred EEEEEeccCCcccccccccCc----hhHHHHH-----HHHHHc---CCceEEEE-eccccc-cCChHHHHHHHHHHHHhC
Q 004411 290 SIKILPVGIHMGQFESIMSLD----VTGQKVK-----ELKEKF---DGKIVILG-VDDMDL-FKGISLKFLAMGQLLEQH 355 (755)
Q Consensus 290 ~i~v~p~GId~~~f~~~~~~~----~~~~~~~-----~lr~~~---~~~~vil~-VdRld~-~KGi~~~l~A~~~ll~~~ 355 (755)
.+ |+|||||++.|.+...-. ..++++. .++.+| .+++++++ +||+++ .||++.+|+|+.++-..-
T Consensus 250 d~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l 328 (590)
T cd03793 250 DV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLL 328 (590)
T ss_pred CE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHH
Confidence 23 899999999997642110 0111222 234544 36788888 799999 999999999999985521
Q ss_pred CCC-CCcEEEEEEecCCCCCc---------hhHHHHHHHHHHHHHHHhcc------------------------------
Q 004411 356 PDL-RGKVVLVQITNPARSSG---------KDVQDLLSDTNRIAEEINLN------------------------------ 395 (755)
Q Consensus 356 P~~-~~~vvLvqi~~p~r~~~---------~~~~~l~~~i~~lv~~In~~------------------------------ 395 (755)
..- .+..|+..+..|+...+ .-.+++++.++++..+|+.+
T Consensus 329 ~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~ 408 (590)
T cd03793 329 KVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIF 408 (590)
T ss_pred HhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHH
Confidence 111 12223334445654331 12344556666665555544
Q ss_pred --------------------------------cC-CCCCccEEEecCCCC------hhhHHHHHHhCcEEEEcCCCcCCC
Q 004411 396 --------------------------------FG-KPGYEPIVIIKEPLS------TQDKVPYYAIAECCVVNCVRDGMN 436 (755)
Q Consensus 396 --------------------------------~g-~~~~~pV~~~~~~v~------~~el~aly~~ADv~vvtS~~EG~n 436 (755)
+. ..+-..|+|....++ ..+...+|+.||+||+||++||||
T Consensus 409 ~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG 488 (590)
T cd03793 409 ALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWG 488 (590)
T ss_pred hhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCC
Confidence 10 012223555443333 235889999999999999999999
Q ss_pred ccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcc----cccC----CcEEeC-------CCCHHHHHHHHH
Q 004411 437 LVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS----PSLS----GAIRVN-------PWNVDAVADAMD 501 (755)
Q Consensus 437 Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l~----~ai~Vn-------P~d~~~~A~ai~ 501 (755)
++++||||||. |+|+|..+|.. +.+. .|+.|. +.+++++|++|.
T Consensus 489 ~~~lEAma~G~---------------------PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~ 547 (590)
T cd03793 489 YTPAECTVMGI---------------------PSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMY 547 (590)
T ss_pred cHHHHHHHcCC---------------------CEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHH
Confidence 99999999975 89999999984 4432 378887 566788999999
Q ss_pred HHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 502 SALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
+.++++..++........+.....+|.+-+..|++.-.
T Consensus 548 ~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 548 EFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99977644433332233355667888888887776544
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.6e-20 Score=205.40 Aligned_cols=290 Identities=12% Similarity=0.083 Sum_probs=191.1
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeE-EEEEecCCCchhhhhcCCChHHHH----HHhhhCCEEEEeCHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKV-GFFLHSPFPSSEIYRTLPVRDEIL----KSLLNSDLIGFHTFD 256 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i-~~flH~PfP~~e~~r~lp~~~~il----~~ll~~Dligf~t~~ 256 (755)
.++...+| |+||.|++...+++.+..... .+++ +...|. ++... +..++ +.+..++++.-.+.
T Consensus 274 ~~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd- 341 (578)
T PRK15490 274 PHLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD- 341 (578)
T ss_pred HHHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-
Confidence 34444566 899999999877766665544 4555 455675 32211 11211 11333444333222
Q ss_pred HHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccc
Q 004411 257 YARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDM 335 (755)
Q Consensus 257 ~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRl 335 (755)
+..+.....+.+.. .+.....+|.++|||||+++|.+....+ ......++..+ .+.++|++|+|+
T Consensus 342 ~v~~s~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl 407 (578)
T PRK15490 342 FMSNNHCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRF 407 (578)
T ss_pred hhhccHHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEE
Confidence 22222211111110 0112345789999999999987642111 11112223333 355788999999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhh
Q 004411 336 DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415 (755)
Q Consensus 336 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 415 (755)
.+.||...+++|+.++++++|+++ |+++| +|+. ++++++++.+.+.. ..|+|++ . .++
T Consensus 408 ~~~Kg~~~LI~A~a~llk~~pdir----LvIVG-----dG~~----~eeLk~la~elgL~------d~V~FlG-~--~~D 465 (578)
T PRK15490 408 VGDKNPFAWIDFAARYLQHHPATR----FVLVG-----DGDL----RAEAQKRAEQLGIL------ERILFVG-A--SRD 465 (578)
T ss_pred ehhcCHHHHHHHHHHHHhHCCCeE----EEEEe-----Cchh----HHHHHHHHHHcCCC------CcEEECC-C--hhh
Confidence 999999999999999999998866 88887 3443 24555566554321 1377664 3 578
Q ss_pred HHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCC
Q 004411 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWN 492 (755)
Q Consensus 416 l~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d 492 (755)
+..+|+.||+||+||.+|||+++++||||||. |+|+|..+|+.+.+. +|++|+|.|
T Consensus 466 v~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl---------------------PVVATdvGG~~EiV~dG~nG~LVp~~D 524 (578)
T PRK15490 466 VGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV---------------------PVISTPAGGSAECFIEGVSGFILDDAQ 524 (578)
T ss_pred HHHHHHhCCEEEEcccccCccHHHHHHHHhCC---------------------CEEEeCCCCcHHHcccCCcEEEECCCC
Confidence 99999999999999999999999999999975 899999999998873 599999999
Q ss_pred HHHHHHHHHHHhcCCH--HHHHHHHHHHhhHhh-hcCHHHHHHHHHHHHHH
Q 004411 493 VDAVADAMDSALQMEN--QEKILRHEKHYKYIS-SHDVAYWAKSIDQDLER 540 (755)
Q Consensus 493 ~~~~A~ai~~aL~m~~--~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 540 (755)
++++++++..+..+.. .++....++.++++. .+++..-++.|++.++.
T Consensus 525 ~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 525 TVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 9999998854333221 233345567888885 58999988888877654
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-19 Score=201.31 Aligned_cols=281 Identities=15% Similarity=0.153 Sum_probs=196.3
Q ss_pred CCEEEEeCCccchH-H-HHHHhhcCCCeEEEEEecCCCchhhhhc-CC--ChHH----HHHH-hhhCCEEEEeCHHHHHH
Q 004411 191 EDYVWIHDYHLMVL-P-SFLRKRFHRVKVGFFLHSPFPSSEIYRT-LP--VRDE----ILKS-LLNSDLIGFHTFDYARH 260 (755)
Q Consensus 191 ~DiVwvhDyhl~ll-p-~~lr~~~~~~~i~~flH~PfP~~e~~r~-lp--~~~~----il~~-ll~~Dligf~t~~~~~~ 260 (755)
.|+||+|...+... . ..+++ ..+.++++..|--||..-.-.. .+ .... +.+. +-.+|.|...+....+.
T Consensus 107 ~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~ 185 (412)
T PRK10307 107 PDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNK 185 (412)
T ss_pred CCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHH
Confidence 39999998665422 2 23443 3456788777765653211000 10 0011 1111 34588888888876665
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccc
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL 337 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~ 337 (755)
+.+ .+ ....++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+
T Consensus 186 ~~~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~ 240 (412)
T PRK10307 186 ARE-----KG---------------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGE 240 (412)
T ss_pred HHH-----cC---------------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCcccc
Confidence 542 12 12346888999999998865321 1123455666 35689999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004411 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (755)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 417 (755)
.||+..+++|++++ +++|+++ |+++| +|+.. +++++++++.+. ..|+|+ |.++.+++.
T Consensus 241 ~kg~~~li~a~~~l-~~~~~~~----l~ivG-----~g~~~----~~l~~~~~~~~l-------~~v~f~-G~~~~~~~~ 298 (412)
T PRK10307 241 KQGLELVIDAARRL-RDRPDLI----FVICG-----QGGGK----ARLEKMAQCRGL-------PNVHFL-PLQPYDRLP 298 (412)
T ss_pred ccCHHHHHHHHHHh-ccCCCeE----EEEEC-----CChhH----HHHHHHHHHcCC-------CceEEe-CCCCHHHHH
Confidence 99999999999876 4566554 88887 34433 344555544322 137755 689999999
Q ss_pred HHHHhCcEEEEcCCCcCCCcc----ceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCc--cccc-CCcEEeCC
Q 004411 418 PYYAIAECCVVNCVRDGMNLV----PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC--SPSL-SGAIRVNP 490 (755)
Q Consensus 418 aly~~ADv~vvtS~~EG~nLv----~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-~~ai~VnP 490 (755)
.+|+.||++++||..|+++++ .+|||+||. |+|+|..+|. .+.+ .+|++++|
T Consensus 299 ~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~---------------------PVi~s~~~g~~~~~~i~~~G~~~~~ 357 (412)
T PRK10307 299 ALLKMADCHLLPQKAGAADLVLPSKLTNMLASGR---------------------NVVATAEPGTELGQLVEGIGVCVEP 357 (412)
T ss_pred HHHHhcCEeEEeeccCcccccCcHHHHHHHHcCC---------------------CEEEEeCCCchHHHHHhCCcEEeCC
Confidence 999999999999999996554 589999975 8899988774 3444 47999999
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHHHHHH
Q 004411 491 WNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 491 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~ 541 (755)
.|++++|++|.++++++ +++..+.++.++++. .+++...+++|++.+++.
T Consensus 358 ~d~~~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 358 ESVEALVAAIAALARQA-LLRPKLGTVAREYAERTLDKENVLRQFIADIRGL 408 (412)
T ss_pred CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 99999999999999865 566777788898886 589999999999888765
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-19 Score=198.77 Aligned_cols=257 Identities=13% Similarity=0.122 Sum_probs=175.7
Q ss_pred HHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHH-HHhhhCCEEEEeCHHHHHHHH
Q 004411 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-KSLLNSDLIGFHTFDYARHFL 262 (755)
Q Consensus 184 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il-~~ll~~Dligf~t~~~~~~Fl 262 (755)
.+..++ |+|++|..+...++.++.++.....+.+..|..+...+.+........+. ..+..+|.+...+....+.+.
T Consensus 76 ~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 153 (358)
T cd03812 76 IKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLF 153 (358)
T ss_pred HhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 333444 99999999876777766666555556777887764433222111100011 112345666665554444433
Q ss_pred HHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccC
Q 004411 263 SSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFK 339 (755)
Q Consensus 263 ~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~K 339 (755)
.. ....++.++|+|||.+.+..... ..+ . ++++ .++.+|+++||+++.|
T Consensus 154 ~~---------------------~~~~~~~vi~ngvd~~~~~~~~~---~~~---~-~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 154 GK---------------------VKNKKFKVIPNGIDLEKFIFNEE---IRK---K-RRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred hC---------------------CCcccEEEEeccCcHHHcCCCch---hhh---H-HHHcCCCCCCEEEEEEecccccc
Confidence 20 11246788999999988864321 111 1 2222 5788999999999999
Q ss_pred ChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHH
Q 004411 340 GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (755)
Q Consensus 340 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~al 419 (755)
|+..+++|+..+.+++|+++ |+++|. ++..+. +++.+++.+. . ..|.+++ . .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~----~~~~~~~~~~----~--~~v~~~g-~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEE----IKKKVKELGL----E--DKVIFLG-V--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHH----HHHHHHhcCC----C--CcEEEec-c--cCCHHHH
Confidence 99999999999999998866 888873 343333 3344433221 1 1366554 3 7789999
Q ss_pred HHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHH
Q 004411 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVA 497 (755)
Q Consensus 420 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A 497 (755)
|+.||++|+||..||||++++||||||. |+|+|+.+|..+.+. ++++..+.+++++|
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~G~---------------------PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a 322 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQASGL---------------------PCILSDTITKEVDLTDLVKFLSLDESPEIWA 322 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHhCC---------------------CEEEEcCCchhhhhccCccEEeCCCCHHHHH
Confidence 9999999999999999999999999975 899999999988884 35666666789999
Q ss_pred HHHHHHhcCCHHHHHH
Q 004411 498 DAMDSALQMENQEKIL 513 (755)
Q Consensus 498 ~ai~~aL~m~~~er~~ 513 (755)
++|.+++++++..+..
T Consensus 323 ~~i~~l~~~~~~~~~~ 338 (358)
T cd03812 323 EEILKLKSEDRRERSS 338 (358)
T ss_pred HHHHHHHhCcchhhhh
Confidence 9999999998754443
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-19 Score=204.39 Aligned_cols=314 Identities=15% Similarity=0.142 Sum_probs=209.5
Q ss_pred cccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCc-cchHHHHHHhhcCCCeEEE
Q 004411 141 FCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYH-LMVLPSFLRKRFHRVKVGF 219 (755)
Q Consensus 141 f~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyh-l~llp~~lr~~~~~~~i~~ 219 (755)
+-..-.||-||.+.. .-...|.++..+.+ +. |.|||-.-- ..-+| ++| +.++||++
T Consensus 109 ~~~~~~~~~~t~~~~--------~~~~~~l~~~~~~~---------~~---p~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIGQ--------SLGSVYLAWEALCK---------FT---PLYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHHH--------HHHHHHHHHHHHHh---------cC---CCEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 334556777776532 22566777665432 22 348884321 12223 344 33789999
Q ss_pred EEecCCCchhhhhcCCCh-------------------HH----H---HHH--hhhCCEEEEeCHHHHHHHHHHHhhHhCc
Q 004411 220 FLHSPFPSSEIYRTLPVR-------------------DE----I---LKS--LLNSDLIGFHTFDYARHFLSSCSRMLGL 271 (755)
Q Consensus 220 flH~PfP~~e~~r~lp~~-------------------~~----i---l~~--ll~~Dligf~t~~~~~~Fl~~~~r~lg~ 271 (755)
..|.|.-+.+....+-.+ +. . +.. +-.+|.|...+....+++.+ ..+
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~~- 240 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LWR- 240 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----HcC-
Confidence 999776565443322000 00 0 111 24567777766655545432 111
Q ss_pred cccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHH
Q 004411 272 NYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351 (755)
Q Consensus 272 ~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~l 351 (755)
...++.++++|+|.+.+... + . +...+++++++|||+.+.||+..+|+||.++
T Consensus 241 ---------------~~~~i~vvyp~vd~~~~~~~---~-~--------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l 293 (463)
T PLN02949 241 ---------------IPERIKRVYPPCDTSGLQAL---P-L--------ERSEDPPYIISVAQFRPEKAHALQLEAFALA 293 (463)
T ss_pred ---------------CCCCeEEEcCCCCHHHcccC---C-c--------cccCCCCEEEEEEeeeccCCHHHHHHHHHHH
Confidence 11256778899998766321 1 0 0113467899999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCC
Q 004411 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV 431 (755)
Q Consensus 352 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~ 431 (755)
+++.++-..++.|+++|... .++..++.+++++++++.+.. + .|.|+ +.++.+++.++|+.||+++.||.
T Consensus 294 ~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~L~----~--~V~f~-g~v~~~el~~ll~~a~~~v~~s~ 363 (463)
T PLN02949 294 LEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELGLD----G--DVEFH-KNVSYRDLVRLLGGAVAGLHSMI 363 (463)
T ss_pred HHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcCCC----C--cEEEe-CCCCHHHHHHHHHhCcEEEeCCc
Confidence 87543221234588888542 122234456677777665332 1 36765 68999999999999999999999
Q ss_pred CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccc-ccC------CcEEeCCCCHHHHHHHHHHHh
Q 004411 432 RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP-SLS------GAIRVNPWNVDAVADAMDSAL 504 (755)
Q Consensus 432 ~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-~l~------~ai~VnP~d~~~~A~ai~~aL 504 (755)
.||||++++||||||. |+|+|..+|..+ .+. .|++++ |++++|++|.+++
T Consensus 364 ~E~FGivvlEAMA~G~---------------------PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll 420 (463)
T PLN02949 364 DEHFGISVVEYMAAGA---------------------VPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVL 420 (463)
T ss_pred cCCCChHHHHHHHcCC---------------------cEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHH
Confidence 9999999999999964 899999888753 332 377774 9999999999999
Q ss_pred cCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHHH
Q 004411 505 QMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERAC 542 (755)
Q Consensus 505 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 542 (755)
+++++++++..++.++++.++++..-++++++.+....
T Consensus 421 ~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 421 RMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred hCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 99877888888888999999999998888887776543
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=201.21 Aligned_cols=281 Identities=16% Similarity=0.162 Sum_probs=188.0
Q ss_pred CCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHH---------HhhhCCEEEEeCHHHHHH
Q 004411 190 DEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK---------SLLNSDLIGFHTFDYARH 260 (755)
Q Consensus 190 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~---------~ll~~Dligf~t~~~~~~ 260 (755)
..|+|++|+..... + +++.. .+.++.++.|.| ..........-..+.+ .+-.+|.|...+......
T Consensus 94 ~~Dvi~~~~~~~~~-~-~~~~~-~~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~ 168 (392)
T cd03805 94 KYDVFIVDQVSACV-P-LLKLF-SPSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASV 168 (392)
T ss_pred CCCEEEEcCcchHH-H-HHHHh-cCCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHH
Confidence 35999998866432 2 23322 237899999954 2211110011111111 134477877766654443
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCC
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 340 (755)
+... ++. .....+.++|+|||.+.|.+..... ..+.....+++.+|+++||+.+.||
T Consensus 169 ~~~~----~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg 225 (392)
T cd03805 169 FKKT----FPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKN 225 (392)
T ss_pred HHHH----hcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCC
Confidence 3321 110 0011235789999998886532110 0111112257789999999999999
Q ss_pred hHHHHHHHHHHHHhC---CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHH-HhcccCCCCCccEEEecCCCChhhH
Q 004411 341 ISLKFLAMGQLLEQH---PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEE-INLNFGKPGYEPIVIIKEPLSTQDK 416 (755)
Q Consensus 341 i~~~l~A~~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~-In~~~g~~~~~pV~~~~~~v~~~el 416 (755)
+..+++|++++.++. |+++ |+++|..... ..+..++.+++++++++ .+.. ..|+|+ |.++.+++
T Consensus 226 ~~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l~------~~V~f~-g~~~~~~~ 293 (392)
T cd03805 226 IALAIEAFAILKDKLAEFKNVR----LVIAGGYDPR-VAENVEYLEELQRLAEELLLLE------DQVIFL-PSISDSQK 293 (392)
T ss_pred hHHHHHHHHHHHhhcccccCeE----EEEEcCCCCC-CchhHHHHHHHHHHHHHhcCCC------ceEEEe-CCCChHHH
Confidence 999999999998876 6654 8888853321 12223455666777655 3221 136655 68999999
Q ss_pred HHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCH
Q 004411 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV 493 (755)
Q Consensus 417 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~ 493 (755)
..+|+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. +|++++| |+
T Consensus 294 ~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~---------------------PvI~s~~~~~~e~i~~~~~g~~~~~-~~ 351 (392)
T cd03805 294 ELLLSSARALLYTPSNEHFGIVPLEAMYAGK---------------------PVIACNSGGPLETVVDGETGFLCEP-TP 351 (392)
T ss_pred HHHHhhCeEEEECCCcCCCCchHHHHHHcCC---------------------CEEEECCCCcHHHhccCCceEEeCC-CH
Confidence 9999999999999999999999999999975 899999999888773 4888887 99
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHH
Q 004411 494 DAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKS 533 (755)
Q Consensus 494 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~ 533 (755)
+++|++|.++++.++ +++.+.++.++++. .+++...+++
T Consensus 352 ~~~a~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 352 EEFAEAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 999999999999764 56666777888874 5777777664
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-20 Score=198.68 Aligned_cols=163 Identities=18% Similarity=0.196 Sum_probs=126.9
Q ss_pred CceEEEecCCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCC
Q 004411 584 NSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKN 661 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~ 661 (755)
..++|++||||||++.. |.++.++++++++|++|++++++.|+|+|||++..+.++++.+ ++.++++||++++..++
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~ 91 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDING 91 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCC
Confidence 36899999999999854 3466889999999999998789999999999999999999875 47899999999987643
Q ss_pred CceeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEEecCe
Q 004411 662 SAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQH 741 (755)
Q Consensus 662 ~~w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~sG~~ 741 (755)
.|.. ...+.+|.+.+...++.+..+++|+++|.|+.+++|||+.++ +- .....++...+.+.+. .+.+.+|+.
T Consensus 92 -~~~~--~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~-~~-~~~~~~l~~~i~~~~~--~~~~~~g~~ 164 (266)
T PRK10187 92 -KTHI--VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAP-QH-EDALLALAQRITQIWP--QLALQPGKC 164 (266)
T ss_pred -Ceee--ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCC-cc-HHHHHHHHHHHHhhCC--ceEEeCCCE
Confidence 3432 134455666666667777888999999999999999999873 21 1222334444443332 367789999
Q ss_pred EEEEEeCCCCCCC
Q 004411 742 IVEVKPQVCQHQS 754 (755)
Q Consensus 742 ~VEV~p~gvnKG~ 754 (755)
++||+|+++|||+
T Consensus 165 ~lEi~p~g~~Kg~ 177 (266)
T PRK10187 165 VVEIKPRGTNKGE 177 (266)
T ss_pred EEEeeCCCCCHHH
Confidence 9999999999985
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.6e-20 Score=214.07 Aligned_cols=276 Identities=15% Similarity=0.113 Sum_probs=182.5
Q ss_pred CEEEEeCCccchHHHHHHhhcCCCeEEE-EEecCCCc---hhhhhcCCChHHHHHHhhhCCEEEEe--CHHHHHHHHHHH
Q 004411 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGF-FLHSPFPS---SEIYRTLPVRDEILKSLLNSDLIGFH--TFDYARHFLSSC 265 (755)
Q Consensus 192 DiVwvhDyhl~llp~~lr~~~~~~~i~~-flH~PfP~---~e~~r~lp~~~~il~~ll~~Dligf~--t~~~~~~Fl~~~ 265 (755)
|+|++|++.-.++..+..+.. ++|+.+ .+|. +|. .+.++. ....+.+.+..++.+.+. +....+.+..
T Consensus 402 DIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~-- 475 (694)
T PRK15179 402 SVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD-- 475 (694)
T ss_pred cEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH--
Confidence 999999998877777666543 456544 5564 221 121110 011122333333433322 2222233321
Q ss_pred hhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccccccCChHHH
Q 004411 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISLK 344 (755)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~ 344 (755)
.++ ....+|.++|+|||++.|.+. +........++... .+..+|++|||+++.||+..+
T Consensus 476 --~~g---------------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~L 535 (694)
T PRK15179 476 --WLG---------------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLW 535 (694)
T ss_pred --HcC---------------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHH
Confidence 112 223578899999999888542 11111112222222 246789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCc
Q 004411 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (755)
Q Consensus 345 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 424 (755)
++||.++++++|+++ |+++|. |+. ++++++++++.+.. + .|+|+ |.. +++..+|+.||
T Consensus 536 I~A~a~l~~~~p~~~----LvIvG~-----G~~----~~~L~~l~~~lgL~----~--~V~fl-G~~--~dv~~ll~aaD 593 (694)
T PRK15179 536 VEAAQRFAASHPKVR----FIMVGG-----GPL----LESVREFAQRLGMG----E--RILFT-GLS--RRVGYWLTQFN 593 (694)
T ss_pred HHHHHHHHHHCcCeE----EEEEcc-----Ccc----hHHHHHHHHHcCCC----C--cEEEc-CCc--chHHHHHHhcC
Confidence 999999999999876 888884 332 24456666655432 1 25654 444 57999999999
Q ss_pred EEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCH--HHHHHH
Q 004411 425 CCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV--DAVADA 499 (755)
Q Consensus 425 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~--~~~A~a 499 (755)
|+|+||.+|||+++++|||+||. |+|+|..+|+.+.+. +|++|+|.|+ ++++++
T Consensus 594 v~VlpS~~Egfp~vlLEAMA~G~---------------------PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~a 652 (694)
T PRK15179 594 AFLLLSRFEGLPNVLIEAQFSGV---------------------PVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEA 652 (694)
T ss_pred EEEeccccccchHHHHHHHHcCC---------------------eEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHH
Confidence 99999999999999999999975 899999999998883 4999998885 689999
Q ss_pred HHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHH
Q 004411 500 MDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQD 537 (755)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~ 537 (755)
|.+++...... ....++.++++. .+++..-++.+++-
T Consensus 653 L~~ll~~l~~~-~~l~~~ar~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 653 LARIHDMCAAD-PGIARKAADWASARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHHhChhcc-HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99888764322 233456777774 67887777776643
|
|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-19 Score=194.76 Aligned_cols=278 Identities=19% Similarity=0.201 Sum_probs=191.8
Q ss_pred CCEEEEeCCccch---HHHHHHh--hcCCCeEEEEEecCCCchhhhhcCCChHHHHH-HhhhCCEEEEeCHHHHHHHHHH
Q 004411 191 EDYVWIHDYHLMV---LPSFLRK--RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK-SLLNSDLIGFHTFDYARHFLSS 264 (755)
Q Consensus 191 ~DiVwvhDyhl~l---lp~~lr~--~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~-~ll~~Dligf~t~~~~~~Fl~~ 264 (755)
.|+|++|+++-.. ....+.. +..+.++.+.+|.+.+.... .....+.+ .+-.+|.|.+.+.+.++.+...
T Consensus 77 ~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 152 (366)
T cd03822 77 PDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLLR 152 (366)
T ss_pred CCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHhh
Confidence 3899998733211 1111111 23678999999986222111 11122222 2456899988875555554421
Q ss_pred HhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHH
Q 004411 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLK 344 (755)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 344 (755)
. . ..++.++|+|+|...+.... . .++ .....++.+|+++||+.+.||+..+
T Consensus 153 ~--------------------~-~~~~~~i~~~~~~~~~~~~~------~-~~~-~~~~~~~~~i~~~G~~~~~K~~~~l 203 (366)
T cd03822 153 A--------------------Y-PEKIAVIPHGVPDPPAEPPE------S-LKA-LGGLDGRPVLLTFGLLRPYKGLELL 203 (366)
T ss_pred c--------------------C-CCcEEEeCCCCcCcccCCch------h-hHh-hcCCCCCeEEEEEeeccCCCCHHHH
Confidence 0 0 24678899999987765421 0 111 1122567899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCc
Q 004411 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (755)
Q Consensus 345 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 424 (755)
++|++++.+++|+++ |+++|... ........+..+++.+.+.. ..|+++++.++.+++..+|+.||
T Consensus 204 l~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad 269 (366)
T cd03822 204 LEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAAD 269 (366)
T ss_pred HHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcC
Confidence 999999988888765 88777422 11111111111223333221 13777766699999999999999
Q ss_pred EEEEcCCCc--CCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-C--CcEEeCCCCHHHHHHH
Q 004411 425 CCVVNCVRD--GMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--GAIRVNPWNVDAVADA 499 (755)
Q Consensus 425 v~vvtS~~E--G~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~ai~VnP~d~~~~A~a 499 (755)
++++||..| |++++++|||+||. |+|+|..+| .+.+ . .|++++|.|++++|++
T Consensus 270 ~~v~ps~~e~~~~~~~~~Ea~a~G~---------------------PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~ 327 (366)
T cd03822 270 VVVLPYRSADQTQSGVLAYAIGFGK---------------------PVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEA 327 (366)
T ss_pred EEEecccccccccchHHHHHHHcCC---------------------CEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHH
Confidence 999999999 99999999999975 899999888 6666 2 5899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHH
Q 004411 500 MDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (755)
|.++++++ +++.++.++.++++.++++..+++.+.+-+
T Consensus 328 l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 328 IRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 99999965 456667778899999999999999887654
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=195.91 Aligned_cols=273 Identities=18% Similarity=0.155 Sum_probs=196.4
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCch--hhhhc---CCChHHHHHHhhhCCEEEEeCHHHHHHHHHHH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS--EIYRT---LPVRDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~--e~~r~---lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~ 265 (755)
-|+||+|++..... +..+.++.+.+|-.+|.. +.+.. ...+......+..+|.+.+.+...++.+.+..
T Consensus 86 ~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~ 159 (365)
T cd03809 86 LDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYL 159 (365)
T ss_pred CCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHh
Confidence 39999998877665 456789999999765422 11110 11222334456778999888877666665421
Q ss_pred hhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHH
Q 004411 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (755)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 345 (755)
+. ...++.++|+|+|...+..... .. ........++++|+++||+.+.||+..++
T Consensus 160 ----~~---------------~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l 214 (365)
T cd03809 160 ----GV---------------PPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLL 214 (365)
T ss_pred ----Cc---------------CHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHH
Confidence 11 1236778999999987754311 11 11112235788999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcE
Q 004411 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAEC 425 (755)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 425 (755)
+|+..+.+.+|+.+ |+++|... .........+ .+. +. ...+.+.+.++.+++..+|+.||+
T Consensus 215 ~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~----~~~----~~---~~~v~~~g~~~~~~~~~~~~~~d~ 275 (365)
T cd03809 215 EAFARLPAKGPDPK----LVIVGKRG----WLNEELLARL----REL----GL---GDRVRFLGYVSDEELAALYRGARA 275 (365)
T ss_pred HHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHH----HHc----CC---CCeEEECCCCChhHHHHHHhhhhh
Confidence 99999998887555 88777432 1111222222 121 11 123345679999999999999999
Q ss_pred EEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHHHHHHHh
Q 004411 426 CVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAMDSAL 504 (755)
Q Consensus 426 ~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ai~~aL 504 (755)
+++||..||++++++|||+||. |+|+|+.+|..+.+. +|+.++|.|+++++++|.+++
T Consensus 276 ~l~ps~~e~~~~~~~Ea~a~G~---------------------pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~ 334 (365)
T cd03809 276 FVFPSLYEGFGLPVLEAMACGT---------------------PVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLL 334 (365)
T ss_pred hcccchhccCCCCHHHHhcCCC---------------------cEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHh
Confidence 9999999999999999999975 899999988888774 789999999999999999998
Q ss_pred cCCHHHHHHHHHHHhhHhhhcCHHHHHHHHH
Q 004411 505 QMENQEKILRHEKHYKYISSHDVAYWAKSID 535 (755)
Q Consensus 505 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (755)
+.+ +.+....+..++++.++++..++++++
T Consensus 335 ~~~-~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 335 EDP-ALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred cCH-HHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 754 566666677788889999999998875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.3e-19 Score=190.98 Aligned_cols=280 Identities=15% Similarity=0.175 Sum_probs=193.6
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHh-hhCCEEEEeCHHHHHHHHH
Q 004411 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL-LNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~l-l~~Dligf~t~~~~~~Fl~ 263 (755)
+..++ |+|++|+++......+........++.+..|..++...-. ..+....+.+.+ -.+|.+...+......+..
T Consensus 77 ~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 153 (365)
T cd03807 77 RRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKK-STRLVARLRRLLSSFIPLIVANSAAAAEYHQA 153 (365)
T ss_pred HhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccch-hHhHHHHHHHHhccccCeEEeccHHHHHHHHH
Confidence 33455 8999999998777766666546788999999765442100 001111121211 2356665555544333332
Q ss_pred HHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCC
Q 004411 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (755)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 340 (755)
. +. ...++.++|+|+|...+.+.... ...+++++ .++.+|+++||+++.||
T Consensus 154 ~-----~~---------------~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~G~~~~~K~ 207 (365)
T cd03807 154 I-----GY---------------PPKKIVVIPNGVDTERFSPDLDA------RARLREELGLPEDTFLIGIVARLHPQKD 207 (365)
T ss_pred c-----CC---------------ChhheeEeCCCcCHHhcCCcccc------hHHHHHhcCCCCCCeEEEEecccchhcC
Confidence 0 11 12367789999999887653211 12233444 46788999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHH-HHhcccCCCCCccEEEecCCCChhhHHHH
Q 004411 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAE-EINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (755)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~-~In~~~g~~~~~pV~~~~~~v~~~el~al 419 (755)
+..+++|+..+.+++|+++ |+++|... ..... ..... .. +..+ .|.+++ +.+++..+
T Consensus 208 ~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~----~~~~~~~~----~~~~--~v~~~g---~~~~~~~~ 265 (365)
T cd03807 208 HATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANL----ELLALKEL----GLED--KVILLG---ERSDVPAL 265 (365)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHH----HHHHHHhc----CCCc--eEEEcc---ccccHHHH
Confidence 9999999999988887765 88777432 22122 22222 22 2111 255543 35789999
Q ss_pred HHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHH
Q 004411 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVAD 498 (755)
Q Consensus 420 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ 498 (755)
|+.||++++||..||+|++++|||+||. |+|+|+.+|..+.+. +|+++++.|++++++
T Consensus 266 ~~~adi~v~ps~~e~~~~~~~Ea~a~g~---------------------PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~ 324 (365)
T cd03807 266 LNALDVFVLSSLSEGFPNVLLEAMACGL---------------------PVVATDVGDNAELVGDTGFLVPPGDPEALAE 324 (365)
T ss_pred HHhCCEEEeCCccccCCcHHHHHHhcCC---------------------CEEEcCCCChHHHhhcCCEEeCCCCHHHHHH
Confidence 9999999999999999999999999975 899999999888885 599999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHHHHHHH
Q 004411 499 AMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQD 537 (755)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~ 537 (755)
+|.++++++ +++....+++++++.+ +++..-++.|.+-
T Consensus 325 ~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 325 AIEALLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHHHHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999986 4666667778888764 7888888877754
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=202.65 Aligned_cols=187 Identities=12% Similarity=-0.004 Sum_probs=129.7
Q ss_pred EEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEecc-c-cccCChHHHHHHHHHHHHhCCCCCCcEEEEE
Q 004411 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDD-M-DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (755)
Q Consensus 289 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdR-l-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (755)
.++.++|+|||++.+...... ...+ .-.++++|++|+| + ++.||+..+++|+.++ .++ +.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~-------~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~~----~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAEL-------PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GDK----IELHT 276 (405)
T ss_pred CCEEEeCCCcCcccccccccc-------cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CCC----eEEEE
Confidence 368889999998543221100 0011 1246788999999 4 4789999999999875 233 55888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 367 i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
+|.. +... . ..|.+++...+.+++..+|+.||+||+||..|||++|++||||||
T Consensus 277 vG~g-----~~~~-----------------~----~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G 330 (405)
T PRK10125 277 FGKF-----SPFT-----------------A----GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG 330 (405)
T ss_pred EcCC-----Cccc-----------------c----cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC
Confidence 8742 1100 0 025555433467899999999999999999999999999999997
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh-h
Q 004411 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-S 523 (755)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~ 523 (755)
. |+|+|+.+|+.+.+. +|++|+|.|++++|+++...+... +.....+..++.+ .
T Consensus 331 ~---------------------PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~ 387 (405)
T PRK10125 331 V---------------------PVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRA 387 (405)
T ss_pred C---------------------CEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHH
Confidence 5 899999999988873 599999999999998653322110 0000123355554 4
Q ss_pred hcCHHHHHHHHHHHHH
Q 004411 524 SHDVAYWAKSIDQDLE 539 (755)
Q Consensus 524 ~~~~~~W~~~~l~~l~ 539 (755)
.+++..-++++++-.+
T Consensus 388 ~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 388 AYSGQQMLEEYVNFYQ 403 (405)
T ss_pred hCCHHHHHHHHHHHHH
Confidence 5888888888876543
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.6e-19 Score=196.76 Aligned_cols=271 Identities=13% Similarity=0.093 Sum_probs=191.2
Q ss_pred CCCCEEEEeCCccc-hHHHHHHhhcCCCeEEEEEecCC--CchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHH
Q 004411 189 PDEDYVWIHDYHLM-VLPSFLRKRFHRVKVGFFLHSPF--PSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (755)
Q Consensus 189 ~~~DiVwvhDyhl~-llp~~lr~~~~~~~i~~flH~Pf--P~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~ 265 (755)
++.|+++.|-++.. ....+++++....++....|-.. +.......++.++.+ +-.+|.|.+.+....+.+...
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~- 201 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR- 201 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH-
Confidence 44577777655543 33345666666666888888432 111111111222222 356899998888766554321
Q ss_pred hhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHH
Q 004411 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (755)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 345 (755)
.+ ....++.++|+|++...+.+. + ...++..|+++||+.+.||+..++
T Consensus 202 ---~~---------------~~~~ki~vi~~gv~~~~~~~~---~-----------~~~~~~~il~~Grl~~~Kg~~~li 249 (407)
T cd04946 202 ---YP---------------AYKEKIKVSYLGVSDPGIISK---P-----------SKDDTLRIVSCSYLVPVKRVDLII 249 (407)
T ss_pred ---CC---------------CccccEEEEECCcccccccCC---C-----------CCCCCEEEEEeeccccccCHHHHH
Confidence 11 123467789999998766431 0 114567899999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHh--C
Q 004411 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI--A 423 (755)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~--A 423 (755)
+|+.++.+++|+.. +.++.+|. |++.+ ++++++.+. +.. ..|+ +.|.++.+|+.++|+. |
T Consensus 250 ~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~----~l~~~~~~~----~~~--~~V~-f~G~v~~~e~~~~~~~~~~ 311 (407)
T cd04946 250 KALAALAKARPSIK--IKWTHIGG-----GPLED----TLKELAESK----PEN--ISVN-FTGELSNSEVYKLYKENPV 311 (407)
T ss_pred HHHHHHHHhCCCce--EEEEEEeC-----chHHH----HHHHHHHhc----CCC--ceEE-EecCCChHHHHHHHhhcCC
Confidence 99999999988764 66777773 44433 344444322 111 1255 4579999999999986 7
Q ss_pred cEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCC-CCHHHHHHH
Q 004411 424 ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNP-WNVDAVADA 499 (755)
Q Consensus 424 Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP-~d~~~~A~a 499 (755)
|+++.||..|||+++++|||+||. |+|+|..+|..+.+. +|++++| .|++++|++
T Consensus 312 ~v~v~~S~~Eg~p~~llEAma~G~---------------------PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~ 370 (407)
T cd04946 312 DVFVNLSESEGLPVSIMEAMSFGI---------------------PVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSS 370 (407)
T ss_pred CEEEeCCccccccHHHHHHHHcCC---------------------CEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHH
Confidence 899999999999999999999975 899999999998884 3788877 489999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHH
Q 004411 500 MDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSID 535 (755)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 535 (755)
|.+++++ ++++..+.++.++++. .+++..+.++|+
T Consensus 371 I~~ll~~-~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 371 LSKFIDN-EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999985 4577777788888885 578888888775
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-18 Score=199.31 Aligned_cols=271 Identities=14% Similarity=0.082 Sum_probs=182.6
Q ss_pred CCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCch-hhhhcC----CChHHHHHHhhhCCEEEEeCHHHHHHHHHH
Q 004411 190 DEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS-EIYRTL----PVRDEILKSLLNSDLIGFHTFDYARHFLSS 264 (755)
Q Consensus 190 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~-e~~r~l----p~~~~il~~ll~~Dligf~t~~~~~~Fl~~ 264 (755)
+.|++.++--+... +.++ +..+.++++.++|.-.-+. ..-..- +.-+..++.+-.+|.|...|..-.+.....
T Consensus 211 ~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 45888886555433 3333 5567899999999542110 000000 111122334445688777776544433321
Q ss_pred HhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHH
Q 004411 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLK 344 (755)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 344 (755)
... +.+...+|.++|+|++...+.+. ....+..|++|||+.+.||+..+
T Consensus 289 ~~~----------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FKK----------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hhh----------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHH
Confidence 111 12223467889999875543210 01234679999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCc
Q 004411 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (755)
Q Consensus 345 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 424 (755)
++|+.++.+++|+++ |+++|. |++. +++++++.+.+.. + .|.+. |+ .++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~~l~----~--~V~f~-G~---~~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINENQAQ----D--YIHLK-GH---RNLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHcCCC----C--eEEEc-CC---CCHHHHHHhCC
Confidence 999999999999876 888873 4432 4556666554321 1 26654 44 36889999999
Q ss_pred EEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCC-CcccccC---CcEEeCC----CC----
Q 004411 425 CCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-GCSPSLS---GAIRVNP----WN---- 492 (755)
Q Consensus 425 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~ai~VnP----~d---- 492 (755)
++|+||.+||||++++||||||. |+|+|... |..+.+. +|++|++ .|
T Consensus 395 v~v~pS~~Egfgl~~lEAma~G~---------------------PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~ 453 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGSGL---------------------GMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQI 453 (500)
T ss_pred EEEEcCccccccHHHHHHHHhCC---------------------CEEEecCCCCCHHHccCCCCEEEEeCCccccchhHH
Confidence 99999999999999999999975 89999986 6777773 5899974 34
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 493 VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
++++|++|.++++ ++++....+..++.++++++..-++++.+-++
T Consensus 454 ~~~la~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 454 ITALAEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 8999999999994 34566677788888888888877777765544
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.9e-19 Score=190.31 Aligned_cols=264 Identities=18% Similarity=0.186 Sum_probs=190.1
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg 270 (755)
.|+|++|..+...+..++..+....+..+.+|.+..... +....+-+.+-.+|.+...+....+.+.+. .+
T Consensus 80 ~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~----~~ 150 (355)
T cd03799 80 IDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIRL----LG 150 (355)
T ss_pred CCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHHh----cC
Confidence 399999987665555555555557888888885422111 111233344567899999888777665531 11
Q ss_pred ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHH
Q 004411 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (755)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (755)
....++.++|+|+|.+.|.... .....++..|+++||+.+.||+..+++|+++
T Consensus 151 ---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~ 203 (355)
T cd03799 151 ---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALAL 203 (355)
T ss_pred ---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHH
Confidence 1234788899999998875421 0122456789999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
+.+++|+++ |+++|. ++.. .++.+.+.+.+. .+.+.+.+.++.+++.++|+.||++++||
T Consensus 204 l~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s 263 (355)
T cd03799 204 LKDRGIDFR----LDIVGD-----GPLR----DELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPS 263 (355)
T ss_pred HhhcCCCeE----EEEEEC-----CccH----HHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEecc
Confidence 987766654 877773 2222 234444444321 12333567899999999999999999999
Q ss_pred CC------cCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHH
Q 004411 431 VR------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMD 501 (755)
Q Consensus 431 ~~------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~ 501 (755)
.. |||+++.+|||+||. |+|+|..+|..+.+. .|++++|.|+++++++|.
T Consensus 264 ~~~~~~~~e~~~~~~~Ea~a~G~---------------------Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~ 322 (355)
T cd03799 264 VTAADGDREGLPVVLMEAMAMGL---------------------PVISTDVSGIPELVEDGETGLLVPPGDPEALADAIE 322 (355)
T ss_pred eecCCCCccCccHHHHHHHHcCC---------------------CEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHH
Confidence 99 999999999999975 889999888777773 489999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHH
Q 004411 502 SALQMENQEKILRHEKHYKYIS-SHDVAYWAK 532 (755)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~ 532 (755)
++++++. ++..+.+..++++. .+++...++
T Consensus 323 ~~~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 323 RLLDDPE-LRREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred HHHhCHH-HHHHHHHHHHHHHHHhcCHHHHhh
Confidence 9998764 45666667777775 466665554
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.4e-19 Score=191.63 Aligned_cols=274 Identities=18% Similarity=0.194 Sum_probs=183.5
Q ss_pred CCEEEEeCCcc-chHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHH------HHHhhhCCEEEEeCHHHHHHHHH
Q 004411 191 EDYVWIHDYHL-MVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEI------LKSLLNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 191 ~DiVwvhDyhl-~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~i------l~~ll~~Dligf~t~~~~~~Fl~ 263 (755)
.|+|++|+... ...+.....+..+.++.++.|..++...... -+.+..+ -..+..+|.+.+.+.........
T Consensus 88 ~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 88 ADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 49999998432 2222222222346888889997665432100 0111111 11123456666665433322211
Q ss_pred HHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCC
Q 004411 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (755)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 340 (755)
.....++.++|+|+|.+.+..... . .. ++.+ .++++|+++||+++.||
T Consensus 167 ---------------------~~~~~~~~vi~~~~~~~~~~~~~~---~----~~-~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 167 ---------------------LGLKAPIAVIPNGVDIPPFAALPS---R----GR-RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred ---------------------hCCcccEEEcCCCcChhccCcchh---h----hh-hhhccCCCCCcEEEEEeCcchhcC
Confidence 112346788999999988864311 1 11 3333 46789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHH
Q 004411 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (755)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 420 (755)
+..+++|+.++.+++|+++ |+++|... ..+ ...++.++.+.+ .. ..|. +.+.++.+++..+|
T Consensus 218 ~~~li~a~~~l~~~~~~~~----l~i~G~~~----~~~---~~~~~~~~~~~~----~~--~~v~-~~g~~~~~~~~~~~ 279 (375)
T cd03821 218 LDLLIEAFAKLAERFPDWH----LVIAGPDE----GGY---RAELKQIAAALG----LE--DRVT-FTGMLYGEDKAAAL 279 (375)
T ss_pred HHHHHHHHHHhhhhcCCeE----EEEECCCC----cch---HHHHHHHHHhcC----cc--ceEE-EcCCCChHHHHHHH
Confidence 9999999999998888766 88777421 122 122333333322 11 1255 45799999999999
Q ss_pred HhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHHH
Q 004411 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVAD 498 (755)
Q Consensus 421 ~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A~ 498 (755)
+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. .|++++ .+.+++++
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~G~---------------------PvI~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 337 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALACGT---------------------PVVTTDKVPWQELIEYGCGWVVD-DDVDALAA 337 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhcCC---------------------CEEEcCCCCHHHHhhcCceEEeC-CChHHHHH
Confidence 999999999999999999999999975 899999999888874 355555 46699999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhhH-hhhcCHHHHHHHHH
Q 004411 499 AMDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSID 535 (755)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 535 (755)
+|.++++++ +++....++.+++ .+.+++..-++.++
T Consensus 338 ~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 338 ALRRALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999999987 5677777778888 46678877777664
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.1e-20 Score=198.40 Aligned_cols=190 Identities=16% Similarity=0.209 Sum_probs=144.3
Q ss_pred EeccCCcccccccccCchhHHHHHHHHHH----cCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 004411 294 LPVGIHMGQFESIMSLDVTGQKVKELKEK----FDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN 369 (755)
Q Consensus 294 ~p~GId~~~f~~~~~~~~~~~~~~~lr~~----~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 369 (755)
+|+|||++.|.+... ...+++++ +++..++++|||+++.||+..+++|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~------~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~ 191 (335)
T PHA01633 118 VFHGINFKIVENAEK------LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH 191 (335)
T ss_pred eeCCCChhhcCccch------hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH
Confidence 567999999875321 11233343 35678899999999999999999999999999998866677776651
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEec--CCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeeccc
Q 004411 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIK--EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (755)
Q Consensus 370 p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~--~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 447 (755)
. ++.+ . +..+ .|.|++ +.++.+++.++|+.||+||+||..||||++++||||||.
T Consensus 192 ------~-------~~~~----l----~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~ 248 (335)
T PHA01633 192 ------K-------QFTQ----L----EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT 248 (335)
T ss_pred ------H-------HHHH----c----CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC
Confidence 1 1111 1 1111 377664 677899999999999999999999999999999999975
Q ss_pred CCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---------------------CcEEeCCCCHHHHHHHHHHHhcC
Q 004411 448 GSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---------------------GAIRVNPWNVDAVADAMDSALQM 506 (755)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---------------------~ai~VnP~d~~~~A~ai~~aL~m 506 (755)
|+|+|..+|..+..+ .|+.+++.|++++|++|.+++.+
T Consensus 249 ---------------------PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 249 ---------------------PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL 307 (335)
T ss_pred ---------------------CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc
Confidence 788888877666432 14578899999999999999887
Q ss_pred CHHHHHHHHHHHhhHhhhcCHHHHHHHHH
Q 004411 507 ENQEKILRHEKHYKYISSHDVAYWAKSID 535 (755)
Q Consensus 507 ~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (755)
.+. .+|..+.++..+++++..-+++|+
T Consensus 308 ~~~--~~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 308 QDR--EERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred cCh--hhhhHHHHHHHHhcCHHHHHHHhh
Confidence 643 333456678888999888877765
|
|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-18 Score=188.91 Aligned_cols=267 Identities=18% Similarity=0.264 Sum_probs=185.6
Q ss_pred HHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChH---------HHH-HHhhhCCEEEEe
Q 004411 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD---------EIL-KSLLNSDLIGFH 253 (755)
Q Consensus 184 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~---------~il-~~ll~~Dligf~ 253 (755)
.+..+| |+|++|+...+........+..++++.+.+|.+++.. ....+... .+. ..+..+|.+...
T Consensus 80 ~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 80 LKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDY--THYVPLGRLLARAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred HhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHH--HHHHhcccchhHHHHHHHHHHHHhhhCCEEEec
Confidence 344455 8999998755433333323334789999999887632 22211111 111 223467888877
Q ss_pred CHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEE
Q 004411 254 TFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVIL 330 (755)
Q Consensus 254 t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil 330 (755)
+......+.. .+ ...++.++|+|+|...+.+... ...++++ .++++|+
T Consensus 156 s~~~~~~~~~-----~~----------------~~~~~~vi~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~ 206 (374)
T cd03817 156 SEKIADLLRE-----YG----------------VKRPIEVIPTGIDLDRFEPVDG--------DDERRKLGIPEDEPVLL 206 (374)
T ss_pred cHHHHHHHHh-----cC----------------CCCceEEcCCccchhccCccch--------hHHHHhcCCCCCCeEEE
Confidence 7764444331 01 1224788999999988765321 1112333 4678899
Q ss_pred EeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCC
Q 004411 331 GVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410 (755)
Q Consensus 331 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~ 410 (755)
++||+.+.||+..+++|++++.++.|+++ |+++|. ++.. .++.+++.+.+.. ..|.+ .+.
T Consensus 207 ~~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~------~~v~~-~g~ 266 (374)
T cd03817 207 YVGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGD-----GPER----EELEELARELGLA------DRVIF-TGF 266 (374)
T ss_pred EEeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeC-----CchH----HHHHHHHHHcCCC------CcEEE-ecc
Confidence 99999999999999999999988767654 887773 2322 3344454443221 12554 578
Q ss_pred CChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEE
Q 004411 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIR 487 (755)
Q Consensus 411 v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~ 487 (755)
++.+++..+|+.||+++.||..||+|++.+|||+||. |+|+|..+|..+.+. +|++
T Consensus 267 ~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~---------------------PvI~~~~~~~~~~i~~~~~g~~ 325 (374)
T cd03817 267 VPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGL---------------------PVVAVDAPGLPDLVADGENGFL 325 (374)
T ss_pred CChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCC---------------------cEEEeCCCChhhheecCceeEE
Confidence 9999999999999999999999999999999999965 899999988888773 5899
Q ss_pred eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcC
Q 004411 488 VNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHD 526 (755)
Q Consensus 488 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 526 (755)
+++.|. +++++|.++++++. .++.+.++.++++.+++
T Consensus 326 ~~~~~~-~~~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 326 FPPGDE-ALAEALLRLLQDPE-LRRRLSKNAEESAEKFS 362 (374)
T ss_pred eCCCCH-HHHHHHHHHHhChH-HHHHHHHHHHHHHHHHH
Confidence 999888 99999999999875 44566667788887765
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.5e-18 Score=184.79 Aligned_cols=283 Identities=18% Similarity=0.200 Sum_probs=201.2
Q ss_pred HHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhh----cCCChHHHHHHhhhCCEEEEeCHHHH
Q 004411 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR----TLPVRDEILKSLLNSDLIGFHTFDYA 258 (755)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r----~lp~~~~il~~ll~~Dligf~t~~~~ 258 (755)
+.+..++ |+|++|+++...+.. +..+..+.++.+++|.+++...... ...........+..+|.+.+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3343344 999999998887665 3445568999999999876432110 00111122233456788888887666
Q ss_pred HHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccc
Q 004411 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDM 335 (755)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRl 335 (755)
+.+.+.. .....++.++|+|+|...+.... ...+... .+++.|+++||+
T Consensus 157 ~~~~~~~-------------------~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~ 208 (374)
T cd03801 157 EELRELG-------------------GVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRL 208 (374)
T ss_pred HHHHhcC-------------------CCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecch
Confidence 6555310 11124678899999998875421 1111112 467889999999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhh
Q 004411 336 DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415 (755)
Q Consensus 336 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 415 (755)
++.||+..+++|+..+.+++|+++ |+++|. ++.... +.+++.+.+.. ..|.+ .+.++.+|
T Consensus 209 ~~~k~~~~~i~~~~~~~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~------~~v~~-~g~~~~~~ 268 (374)
T cd03801 209 VPRKGVDLLLEALAKLRKEYPDVR----LVIVGD-----GPLREE----LEALAAELGLG------DRVTF-LGFVPDED 268 (374)
T ss_pred hhhcCHHHHHHHHHHHhhhcCCeE----EEEEeC-----cHHHHH----HHHHHHHhCCC------cceEE-EeccChhh
Confidence 999999999999999988877654 887772 333333 33343332211 13554 46899999
Q ss_pred HHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCC
Q 004411 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWN 492 (755)
Q Consensus 416 l~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d 492 (755)
+..+|+.||++++|+..||++++++|||+||. |+|+|..+|..+.+. .|+++++.|
T Consensus 269 ~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~---------------------pvI~~~~~~~~~~~~~~~~g~~~~~~~ 327 (374)
T cd03801 269 LPALYAAADVFVLPSLYEGFGLVLLEAMAAGL---------------------PVVASDVGGIPEVVEDGETGLLVPPGD 327 (374)
T ss_pred HHHHHHhcCEEEecchhccccchHHHHHHcCC---------------------cEEEeCCCChhHHhcCCcceEEeCCCC
Confidence 99999999999999999999999999999974 899999998888884 589999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHh-hHhhhcCHHHHHHHHHHHH
Q 004411 493 VDAVADAMDSALQMENQEKILRHEKHY-KYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~-~~v~~~~~~~W~~~~l~~l 538 (755)
+++++++|.++++.+. .+....++.+ ...+.+++..+++.+++-+
T Consensus 328 ~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 328 PEALAEAILRLLDDPE-LRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHHHHcChH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 9999999999998764 4555555666 4456789999998887643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-18 Score=188.17 Aligned_cols=273 Identities=16% Similarity=0.154 Sum_probs=192.1
Q ss_pred HHhCCCCCEEEEeCCccc-hHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCCh----HHHHHH-hhhCCEEEEeCHHHH
Q 004411 185 EVINPDEDYVWIHDYHLM-VLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR----DEILKS-LLNSDLIGFHTFDYA 258 (755)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~-llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~----~~il~~-ll~~Dligf~t~~~~ 258 (755)
+..+| |+|++|+.... .....+.+ ..++++.+++|..||..-........ ..+.+. .-.+|.+.+.+....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~ 156 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAAR-RLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLA 156 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHH-HcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHH
Confidence 44466 89999866443 22233333 34688999999887632211111111 122222 345788888777655
Q ss_pred HHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--CCceEEEEecccc
Q 004411 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMD 336 (755)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld 336 (755)
..+.. .. ..++.++|+|+|.+.|.+.... ...++++ .++++|+++||+.
T Consensus 157 ~~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~ 207 (364)
T cd03814 157 DELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLA 207 (364)
T ss_pred HHHhc--------------------cC--CCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEeccc
Confidence 42221 00 1256789999999888653221 1122222 4678899999999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhH
Q 004411 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (755)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el 416 (755)
+.||+..+++|+.++.++ |+++ |+++|. +++...++ . . ...|.++ +.++.+++
T Consensus 208 ~~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~--------~---~-----~~~v~~~-g~~~~~~~ 260 (364)
T cd03814 208 PEKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE--------A---R-----YPNVHFL-GFLDGEEL 260 (364)
T ss_pred cccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh--------c---c-----CCcEEEE-eccCHHHH
Confidence 999999999999999876 7665 887773 23222221 0 0 1136655 56899999
Q ss_pred HHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCH
Q 004411 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV 493 (755)
Q Consensus 417 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~ 493 (755)
..+|+.||++++||..||||++++||||||. |+|+|..+|..+.+. .|++++|.|.
T Consensus 261 ~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~---------------------PvI~~~~~~~~~~i~~~~~g~~~~~~~~ 319 (364)
T cd03814 261 AAAYASADVFVFPSRTETFGLVVLEAMASGL---------------------PVVAPDAGGPADIVTDGENGLLVEPGDA 319 (364)
T ss_pred HHHHHhCCEEEECcccccCCcHHHHHHHcCC---------------------CEEEcCCCCchhhhcCCcceEEcCCCCH
Confidence 9999999999999999999999999999975 899999999888884 4899999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHH
Q 004411 494 DAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 494 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (755)
++++++|.++++.+ +++..+.+..++++.++++..+++.+++.+
T Consensus 320 ~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 320 EAFAAALAALLADP-ELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHHHHcCH-HHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999999999865 456666677888888899999998887643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.5e-18 Score=187.15 Aligned_cols=275 Identities=16% Similarity=0.230 Sum_probs=194.5
Q ss_pred CCEEEEeC-CccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcC-CC-------hHHHH-HHhhhCCEEEEeCHHHHHH
Q 004411 191 EDYVWIHD-YHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTL-PV-------RDEIL-KSLLNSDLIGFHTFDYARH 260 (755)
Q Consensus 191 ~DiVwvhD-yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~l-p~-------~~~il-~~ll~~Dligf~t~~~~~~ 260 (755)
.|+|++|. ..+..++....++..+.++.+.+|..+|........ .. ...+. ..+..+|.+.+.+...++.
T Consensus 100 ~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~ 179 (394)
T cd03794 100 PDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREY 179 (394)
T ss_pred CCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHH
Confidence 49999998 344455555444555789999999888754322111 11 11111 2245689999999887776
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCC
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 340 (755)
+.. .+ ....++.++|+|+|...+.+.... ...... ....++.+|+++||+...||
T Consensus 180 ~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~i~~~G~~~~~k~ 234 (394)
T cd03794 180 LVR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ESLRKE-LGLDDKFVVLYAGNIGRAQG 234 (394)
T ss_pred HHh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hhhhhc-cCCCCcEEEEEecCcccccC
Confidence 651 11 112467889999999877653211 001111 11257889999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHH
Q 004411 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (755)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 420 (755)
+..+++|+.++.+. |+++ |+++|. ++....++ +++... + ...|.+++ .++.+++.++|
T Consensus 235 ~~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~----~~~~~~----~---~~~v~~~g-~~~~~~~~~~~ 292 (394)
T cd03794 235 LDTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELK----ELAKAL----G---LDNVTFLG-RVPKEELPELL 292 (394)
T ss_pred HHHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHH----HHHHHc----C---CCcEEEeC-CCChHHHHHHH
Confidence 99999999998776 6554 877763 33333332 222211 1 12477665 89999999999
Q ss_pred HhCcEEEEcCCCcCC-----CccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCC
Q 004411 421 AIAECCVVNCVRDGM-----NLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWN 492 (755)
Q Consensus 421 ~~ADv~vvtS~~EG~-----nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d 492 (755)
+.||++++||..|++ ++..+|||+||. |+|+|..+|..+.+. .|+++++.|
T Consensus 293 ~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~---------------------pvi~~~~~~~~~~~~~~~~g~~~~~~~ 351 (394)
T cd03794 293 AAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK---------------------PVLASVDGESAELVEEAGAGLVVPPGD 351 (394)
T ss_pred HhhCeeEEeccCcccccccCchHHHHHHHCCC---------------------cEEEecCCCchhhhccCCcceEeCCCC
Confidence 999999999999876 555799999975 899999999988883 489999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHH
Q 004411 493 VDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSI 534 (755)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~ 534 (755)
+++++++|.++++.+ +++..+.++.++++. .+++..+++++
T Consensus 352 ~~~l~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 352 PEALAAAILELLDDP-EERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 999999999999654 567777778888887 78998888876
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.5e-19 Score=200.64 Aligned_cols=318 Identities=11% Similarity=0.118 Sum_probs=188.5
Q ss_pred EeCChHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCC-ccchH-
Q 004411 127 TFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDY-HLMVL- 204 (755)
Q Consensus 127 v~l~~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDy-hl~ll- 204 (755)
+|=++++.+.|......+-.=+-.--.+.++| ++|....- +-..+-... +.+...+| |+||+|.. ||-..
T Consensus 379 ~F~~p~eQe~~ir~wl~~r~g~~~~~~i~fYp---g~~~~~~~-SI~p~gdI~--~~L~~f~P--DVVHLatP~~LGw~~ 450 (794)
T PLN02501 379 TFSSPEEQESYIRNWLEERIGFKADFKISFYP---GKFSKERR-SIIPAGDTS--QFIPSKDA--DIAILEEPEHLNWYH 450 (794)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCceEEeec---chhccCCc-cccchHHHH--HHhhccCC--CEEEECCchhhccHH
Confidence 67788888888776653211111000011222 34433221 222222222 22233455 99999887 55555
Q ss_pred -HHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHH--HhhHhCccccccCceeE
Q 004411 205 -PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSS--CSRMLGLNYESKRGYIG 281 (755)
Q Consensus 205 -p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~--~~r~lg~~~~~~~~~~~ 281 (755)
+....+++. +++..+|+.||. +++.-.. ..++.++ ..++++|+.. |++++.++.....
T Consensus 451 ~Glr~ArKl~--PVVasyHTny~e--Yl~~y~~--g~L~~~l---------lk~l~~~v~r~hcD~VIaPS~atq~---- 511 (794)
T PLN02501 451 HGKRWTDKFN--HVVGVVHTNYLE--YIKREKN--GALQAFF---------VKHINNWVTRAYCHKVLRLSAATQD---- 511 (794)
T ss_pred HHHHHHHHcC--CeEEEEeCCcHH--HHhHhcc--hhHHHHH---------HHHHHHHHHHhhCCEEEcCCHHHHH----
Confidence 344545543 688899999985 3332111 1111111 1123334433 6666665532211
Q ss_pred EEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcC---CceEEEEeccccccCChHHHHHHHHHHHHhCCCC
Q 004411 282 LDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFD---GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDL 358 (755)
Q Consensus 282 i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~ 358 (755)
+. + ..|.. .+|||++.|.+.... ... ++++ ..+.+++||||.+.||+..+|+|+..+.++.|++
T Consensus 512 --L~-~-~vI~n-VnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnv 578 (794)
T PLN02501 512 --LP-K-SVICN-VHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGF 578 (794)
T ss_pred --hc-c-cceee-cccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCe
Confidence 11 1 11211 159999999864221 111 2221 2245899999999999999999999998888876
Q ss_pred CCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCcc
Q 004411 359 RGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLV 438 (755)
Q Consensus 359 ~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv 438 (755)
+ |+++| +|++.+++ ++++.+.+. .|.|+++ .++..++|+.+||||+||.+||||+|
T Consensus 579 r----LvIVG-----DGP~reeL----e~la~eLgL--------~V~FLG~---~dd~~~lyasaDVFVlPS~sEgFGlV 634 (794)
T PLN02501 579 N----LDVFG-----NGEDAHEV----QRAAKRLDL--------NLNFLKG---RDHADDSLHGYKVFINPSISDVLCTA 634 (794)
T ss_pred E----EEEEc-----CCccHHHH----HHHHHHcCC--------EEEecCC---CCCHHHHHHhCCEEEECCCcccchHH
Confidence 5 88887 45654444 444444321 2666543 34556899999999999999999999
Q ss_pred ceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 004411 439 PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVADAMDSALQMENQEKILRHE 516 (755)
Q Consensus 439 ~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~ 516 (755)
++||||||. |+|+|..+|...... ++++ +.|.++++++|.++|.+++ ++ ..++
T Consensus 635 lLEAMA~Gl---------------------PVVATd~pG~e~V~~g~nGll--~~D~EafAeAI~~LLsd~~-~r-l~~~ 689 (794)
T PLN02501 635 TAEALAMGK---------------------FVVCADHPSNEFFRSFPNCLT--YKTSEDFVAKVKEALANEP-QP-LTPE 689 (794)
T ss_pred HHHHHHcCC---------------------CEEEecCCCCceEeecCCeEe--cCCHHHHHHHHHHHHhCch-hh-hHHH
Confidence 999999975 899999988543222 3443 3799999999999999875 22 2222
Q ss_pred HHhhHhhhcCHHHHHHHHHHH
Q 004411 517 KHYKYISSHDVAYWAKSIDQD 537 (755)
Q Consensus 517 ~~~~~v~~~~~~~W~~~~l~~ 537 (755)
. ..+++|..-++++++.
T Consensus 690 a----~~~~SWeAaadrLle~ 706 (794)
T PLN02501 690 Q----RYNLSWEAATQRFMEY 706 (794)
T ss_pred H----HhhCCHHHHHHHHHHh
Confidence 1 2256666666666543
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.4e-18 Score=184.62 Aligned_cols=278 Identities=18% Similarity=0.201 Sum_probs=192.6
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg 270 (755)
.|+|++|......+......+..+.++.+..|.+++....... ..+......+..+|.+.+.+....+.+....
T Consensus 94 ~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----- 167 (377)
T cd03798 94 PDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG----- 167 (377)
T ss_pred CCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc-----
Confidence 4899999555443333333333457889999987654321111 1222233345678999998887776665310
Q ss_pred ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHH
Q 004411 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (755)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (755)
....++.++|+|+|...+.+... .....+ ....++.+++++||+++.||+..+++|++.
T Consensus 168 ---------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~ 226 (377)
T cd03798 168 ---------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALAR 226 (377)
T ss_pred ---------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHH
Confidence 11246788999999988865311 011111 112467899999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
+.+++|+++ |+++|. +++... +.++++..+.. ..|. +.+.++.+++..+|+.||++++||
T Consensus 227 ~~~~~~~~~----l~i~g~-----~~~~~~----~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~ad~~i~~~ 286 (377)
T cd03798 227 LLKKRPDVH----LVIVGD-----GPLREA----LEALAAELGLE------DRVT-FLGAVPHEEVPAYYAAADVFVLPS 286 (377)
T ss_pred HHhcCCCeE----EEEEcC-----CcchHH----HHHHHHhcCCc------ceEE-EeCCCCHHHHHHHHHhcCeeecch
Confidence 988776654 777763 233222 33333332211 1244 457899999999999999999999
Q ss_pred CCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcCC
Q 004411 431 VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQME 507 (755)
Q Consensus 431 ~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~ 507 (755)
..||+|++++|||+||. |+|+|+.+|..+.+. +|++++|.|+++++++|.++++++
T Consensus 287 ~~~~~~~~~~Ea~~~G~---------------------pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~ 345 (377)
T cd03798 287 LREGFGLVLLEAMACGL---------------------PVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADP 345 (377)
T ss_pred hhccCChHHHHHHhcCC---------------------CEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCc
Confidence 99999999999999975 899999998888773 369999999999999999999987
Q ss_pred HHHHHHHHHHHhhH-hhhcCHHHHHHHHHHHHH
Q 004411 508 NQEKILRHEKHYKY-ISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 508 ~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~ 539 (755)
.. .+..+.++. ...+++..+++.+.+.++
T Consensus 346 ~~---~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 346 WL---RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred HH---HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 54 333444444 456788888888776654
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-18 Score=191.32 Aligned_cols=265 Identities=17% Similarity=0.101 Sum_probs=182.5
Q ss_pred CCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCC-CchhhhhcCCC---hHHHHHHhhhCCEEEEeCHHHHHHHHHHH
Q 004411 190 DEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPF-PSSEIYRTLPV---RDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (755)
Q Consensus 190 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf-P~~e~~r~lp~---~~~il~~ll~~Dligf~t~~~~~~Fl~~~ 265 (755)
..|++.+|..+.... .+.......+...++|... .....-...++ .+.++..+-.+|.|.+.+..-.+.+...
T Consensus 99 ~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~~- 175 (372)
T cd04949 99 KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQKQ- 175 (372)
T ss_pred CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHHH-
Confidence 358998887776554 2223334556677777532 11100001111 2344555667899988888666665431
Q ss_pred hhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHH
Q 004411 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (755)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 345 (755)
++ ...+|.++|+|++...+.+.. .....+..++++||+.+.||+..++
T Consensus 176 ---~~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K~~~~li 223 (372)
T cd04949 176 ---FG----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEKQLDQLI 223 (372)
T ss_pred ---hC----------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCcccCHHHHH
Confidence 11 011277899999988765421 0113456899999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcE
Q 004411 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAEC 425 (755)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 425 (755)
+|+.++.+++|+++ |+++|.. ++...+ ..++.+.+. .+ .|.+. | ..+++.++|+.||+
T Consensus 224 ~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~----~~~~~~~~~----~~--~v~~~-g--~~~~~~~~~~~ad~ 281 (372)
T cd04949 224 KAFAKVVKQVPDAT----LDIYGYG-----DEEEKL----KELIEELGL----ED--YVFLK-G--YTRDLDEVYQKAQL 281 (372)
T ss_pred HHHHHHHHhCCCcE----EEEEEeC-----chHHHH----HHHHHHcCC----cc--eEEEc-C--CCCCHHHHHhhhhE
Confidence 99999999999876 8878742 332223 333333222 11 25544 4 35789999999999
Q ss_pred EEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCC-CcccccC---CcEEeCCCCHHHHHHHHH
Q 004411 426 CVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-GCSPSLS---GAIRVNPWNVDAVADAMD 501 (755)
Q Consensus 426 ~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~ai~VnP~d~~~~A~ai~ 501 (755)
+|+||..||||++.+|||+||. |+|+|+.+ |..+.+. +|++++|.|++++|++|.
T Consensus 282 ~v~~S~~Eg~~~~~lEAma~G~---------------------PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~ 340 (372)
T cd04949 282 SLLTSQSEGFGLSLMEALSHGL---------------------PVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAII 340 (372)
T ss_pred EEecccccccChHHHHHHhCCC---------------------CEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHH
Confidence 9999999999999999999975 89999887 7777773 589999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHH
Q 004411 502 SALQMENQEKILRHEKHYKYISSHDVAYWAKS 533 (755)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 533 (755)
.+++++ +.+..+.++.++...++++..++++
T Consensus 341 ~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 341 ELLNDP-KLLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred HHHcCH-HHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 999976 4566666777777777777666553
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.3e-18 Score=181.60 Aligned_cols=260 Identities=16% Similarity=0.112 Sum_probs=178.3
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg 270 (755)
.|+|++|+.+...+...+... ..++.+..|..++...... .+....-..+-.+|.+.+.+......+.
T Consensus 84 ~d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~-------- 151 (348)
T cd03820 84 PDVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALYY-------- 151 (348)
T ss_pred CCEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHhh--------
Confidence 399999988822222222221 1478888887765322110 0110122234567888877765441100
Q ss_pred ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHH
Q 004411 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (755)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (755)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+++|+++
T Consensus 152 --------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~ 202 (348)
T cd03820 152 --------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAK 202 (348)
T ss_pred --------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHH
Confidence 0112467889999998766431 12457789999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
+.+.+|+++ |+++|. +++... +.+++.+.+.. . .|.+ .+. .+++..+|+.||++++||
T Consensus 203 l~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~----~--~v~~-~g~--~~~~~~~~~~ad~~i~ps 260 (348)
T cd03820 203 IAKKHPDWK----LRIVGD-----GPEREA----LEALIKELGLE----D--RVIL-LGF--TKNIEEYYAKASIFVLTS 260 (348)
T ss_pred HHhcCCCeE----EEEEeC-----CCCHHH----HHHHHHHcCCC----C--eEEE-cCC--cchHHHHHHhCCEEEeCc
Confidence 988788765 777773 233222 33344443221 1 2444 443 789999999999999999
Q ss_pred CCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc-cC---CcEEeCCCCHHHHHHHHHHHhcC
Q 004411 431 VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS-LS---GAIRVNPWNVDAVADAMDSALQM 506 (755)
Q Consensus 431 ~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-l~---~ai~VnP~d~~~~A~ai~~aL~m 506 (755)
..||||++++|||+||. |+|+|+..|..+. +. .|+++++.|+++++++|.+++++
T Consensus 261 ~~e~~~~~~~Ea~a~G~---------------------Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~ 319 (348)
T cd03820 261 RFEGFPMVLLEAMAFGL---------------------PVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMED 319 (348)
T ss_pred cccccCHHHHHHHHcCC---------------------CEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcC
Confidence 99999999999999975 8899987654444 42 58999999999999999999986
Q ss_pred CHHHHHHHHHHHhhHhhhcCHHHHHHHHH
Q 004411 507 ENQEKILRHEKHYKYISSHDVAYWAKSID 535 (755)
Q Consensus 507 ~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (755)
+ +.+....++.++.++++++...+++|.
T Consensus 320 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 320 E-ELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred H-HHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 5 345555566678888899988888764
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-17 Score=180.32 Aligned_cols=262 Identities=15% Similarity=0.144 Sum_probs=178.2
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~F 261 (755)
++++..++ |+|++|.+..+.++.+...+..++++.+++|-.++.. +....+. ...|.+...+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~---~~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFK---KGGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhc---cCCCEEEEeCHHHHHHH
Confidence 34444455 8999998855544333222334689999999765321 1111111 11288888777655555
Q ss_pred HHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCh
Q 004411 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341 (755)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi 341 (755)
.. .+ ....++.++|+|+|...+..... ....++.+++++||+.+.||+
T Consensus 159 ~~-----~~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~ 206 (359)
T cd03823 159 VA-----NG---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGV 206 (359)
T ss_pred HH-----cC---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCH
Confidence 42 01 01247888999999988754210 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004411 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (755)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (755)
..+++|+.++.+ ++.+ |+++|.. .......... +. . ..|. +.+.++.+++..+|+
T Consensus 207 ~~li~~~~~l~~--~~~~----l~i~G~~-----~~~~~~~~~~-------~~--~----~~v~-~~g~~~~~~~~~~~~ 261 (359)
T cd03823 207 DLLLEAFKRLPR--GDIE----LVIVGNG-----LELEEESYEL-------EG--D----PRVE-FLGAYPQEEIDDFYA 261 (359)
T ss_pred HHHHHHHHHHHh--cCcE----EEEEcCc-----hhhhHHHHhh-------cC--C----CeEE-EeCCCCHHHHHHHHH
Confidence 999999999866 5544 8877743 2211111111 10 1 1355 456889999999999
Q ss_pred hCcEEEEcCC-CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHH
Q 004411 422 IAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (755)
Q Consensus 422 ~ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A 497 (755)
.||++++||. .||++++++|||+||. |+|+|+.+|..+.+. .|++++|.|+++++
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~G~---------------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~ 320 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAAGV---------------------PVIASDIGGMAELVRDGVNGLLFPPGDAEDLA 320 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHCCC---------------------CEEECCCCCHHHHhcCCCcEEEECCCCHHHHH
Confidence 9999999997 7999999999999975 899999999888874 49999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHH
Q 004411 498 DAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (755)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (755)
++|.++++.+ +.++...+..++.++. ...++++++
T Consensus 321 ~~i~~l~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 321 AALERLIDDP-DLLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHHHHhCh-HHHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 9999999954 4555555566665543 444444443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.1e-18 Score=187.93 Aligned_cols=240 Identities=14% Similarity=0.109 Sum_probs=166.2
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhc-CCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRF-HRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARH 260 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~-~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~ 260 (755)
++++..+| |+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+...+..-.++
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 34444555 899999987766666666543 23456666776554321111 12235688888777655554
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEecccc--cc
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMD--LF 338 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld--~~ 338 (755)
+.. .++. ..++.++|+|||.+.+.... + ...++++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccC
Confidence 432 1211 23567789999976553211 0 013467899999996 46
Q ss_pred CChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCC--ChhhH
Q 004411 339 KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL--STQDK 416 (755)
Q Consensus 339 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v--~~~el 416 (755)
||+..+++|+.++ .+ ++.|+++|. |++.+ ++++++++.|.. ..|+|. |.+ +.+++
T Consensus 195 k~~~~l~~a~~~~---~~----~~~l~ivG~-----g~~~~----~l~~~~~~~~l~------~~v~f~-G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQT---TG----EWQLHIIGD-----GSDFE----KCKAYSRELGIE------QRIIWH-GWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhh---CC----CeEEEEEeC-----CccHH----HHHHHHHHcCCC------CeEEEe-cccCCcHHHH
Confidence 9999999999876 22 355888883 44433 445555554321 136655 444 45899
Q ss_pred HHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeC-CCCcccccC---CcEEeCCCC
Q 004411 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE-FIGCSPSLS---GAIRVNPWN 492 (755)
Q Consensus 417 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~---~ai~VnP~d 492 (755)
.++|+.||++|+||..||||++++||||||. |+|+|+ .+|+.+.+. +|++|+|.|
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~---------------------Pvv~s~~~~g~~eiv~~~~~G~lv~~~d 310 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSYGI---------------------PCISSDCMSGPRDIIKPGLNGELYTPGN 310 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHcCC---------------------CEEEeCCCCChHHHccCCCceEEECCCC
Confidence 9999999999999999999999999999975 899999 888888774 489999999
Q ss_pred HHHHHHHHHHHhcCCH
Q 004411 493 VDAVADAMDSALQMEN 508 (755)
Q Consensus 493 ~~~~A~ai~~aL~m~~ 508 (755)
++++|++|.++++.++
T Consensus 311 ~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 311 IDEFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHHHhCcc
Confidence 9999999999999874
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.4e-18 Score=180.85 Aligned_cols=273 Identities=18% Similarity=0.168 Sum_probs=191.3
Q ss_pred HHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHH-----HHhhhCCEEEEeCHHHHH
Q 004411 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-----KSLLNSDLIGFHTFDYAR 259 (755)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il-----~~ll~~Dligf~t~~~~~ 259 (755)
+..+| |+|++|..+..++..++.+.....++.++.|...+... .. +....++ ..+-.+|.+.+.+....+
T Consensus 77 ~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~ 151 (359)
T cd03808 77 RKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFT-SG--GLKRRLYLLLERLALRFTDKVIFQNEDDRD 151 (359)
T ss_pred HhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhc-cc--hhHHHHHHHHHHHHHhhccEEEEcCHHHHH
Confidence 33455 89999988877777777665566778887776532211 00 0011111 123457899998888777
Q ss_pred HHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccC
Q 004411 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFK 339 (755)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~K 339 (755)
.+.+. +.. .....+.+.|+|+|.+.+...... ...++.+|+++||+.+.|
T Consensus 152 ~~~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k 201 (359)
T cd03808 152 LALKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDK 201 (359)
T ss_pred HHHHh-----cCC-------------CcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEecccccc
Confidence 76541 100 012356678999999877543110 124678999999999999
Q ss_pred ChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHH
Q 004411 340 GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (755)
Q Consensus 340 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~al 419 (755)
|+..+++|++.+.+++|+++ |+++|.... .+ ..... ++.+.+.. ..|.+++ . .+++..+
T Consensus 202 ~~~~li~~~~~l~~~~~~~~----l~i~G~~~~---~~--~~~~~---~~~~~~~~------~~v~~~g-~--~~~~~~~ 260 (359)
T cd03808 202 GIDELLEAARILKAKGPNVR----LLLVGDGDE---EN--PAAIL---EIEKLGLE------GRVEFLG-F--RDDVPEL 260 (359)
T ss_pred CHHHHHHHHHHHHhcCCCeE----EEEEcCCCc---ch--hhHHH---HHHhcCCc------ceEEEee-c--cccHHHH
Confidence 99999999999988777765 887775321 11 11111 12222111 1366654 3 6789999
Q ss_pred HHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHH
Q 004411 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAV 496 (755)
Q Consensus 420 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~ 496 (755)
|+.||++++||.+||||++++|||+||. |+|+|+.+|..+.+. .|+++++.|++++
T Consensus 261 ~~~adi~i~ps~~e~~~~~~~Ea~~~G~---------------------Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~ 319 (359)
T cd03808 261 LAAADVFVLPSYREGLPRVLLEAMAMGR---------------------PVIATDVPGCREAVIDGVNGFLVPPGDAEAL 319 (359)
T ss_pred HHhccEEEecCcccCcchHHHHHHHcCC---------------------CEEEecCCCchhhhhcCcceEEECCCCHHHH
Confidence 9999999999999999999999999975 899999999988884 4899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhhH-hhhcCHHHHHHHHH
Q 004411 497 ADAMDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSID 535 (755)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 535 (755)
+++|.+++..+ +.+....++.+++ ...+++..+++.++
T Consensus 320 ~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 320 ADAIERLIEDP-ELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99999988765 4555566677777 56788888888765
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.5e-18 Score=189.20 Aligned_cols=272 Identities=11% Similarity=0.063 Sum_probs=175.9
Q ss_pred CCEEEEeCCccc--h-HHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChH---HH---HH-Hh-hhCCEEEEeCHHHHH
Q 004411 191 EDYVWIHDYHLM--V-LPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD---EI---LK-SL-LNSDLIGFHTFDYAR 259 (755)
Q Consensus 191 ~DiVwvhDyhl~--l-lp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~---~i---l~-~l-l~~Dligf~t~~~~~ 259 (755)
.|+|++|..... . ++.++++ ..++|+++.+|.-+++..-. ..+... .+ ++ .+ -.||.|...+....+
T Consensus 96 ~Dvi~~~~~~~~~~~~~a~~~~~-~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~ 173 (415)
T cd03816 96 ADYILIQNPPSIPTLLIAWLYCL-LRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKE 173 (415)
T ss_pred CCEEEEeCCCCchHHHHHHHHHH-HhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHH
Confidence 499999985432 2 2333333 35789999999754321100 011000 11 11 11 236777666655433
Q ss_pred HHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHH---------------Hc-
Q 004411 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKE---------------KF- 323 (755)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~---------------~~- 323 (755)
.+.. .+ ....+|.++|+| +...|.+... . .....+.+ ..
T Consensus 174 ~l~~-----~~---------------~~~~ki~vI~Ng-~~~~f~p~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (415)
T cd03816 174 DLQQ-----FN---------------NWKIRATVLYDR-PPEQFRPLPL---E-EKHELFLKLAKTFLTRELRIGAVQLS 228 (415)
T ss_pred HHHh-----hh---------------ccCCCeeecCCC-CHHHceeCcH---H-HHHHHHHhccccccccccccccceec
Confidence 3321 11 123577889999 5567765421 1 11111111 01
Q ss_pred -CCceEEEEeccccccCChHHHHHHHHHHHHh------CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccc
Q 004411 324 -DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ------HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNF 396 (755)
Q Consensus 324 -~~~~vil~VdRld~~KGi~~~l~A~~~ll~~------~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~ 396 (755)
++..+++++||+.+.||+..+++|++.+.+. +|+ +.|+++|. |+.. +++++++++.+.
T Consensus 229 ~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~ivG~-----G~~~----~~l~~~~~~~~l-- 293 (415)
T cd03816 229 EERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIITGK-----GPLK----EKYLERIKELKL-- 293 (415)
T ss_pred CCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEEec-----CccH----HHHHHHHHHcCC--
Confidence 2356888999999999999999999998763 354 44888883 4433 344555544322
Q ss_pred CCCCCccEEEecCCCChhhHHHHHHhCcEEEEc---CCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe
Q 004411 397 GKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVN---CVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS 473 (755)
Q Consensus 397 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt---S~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S 473 (755)
..++++.+.++.+++..+|++||++|++ +..+||+++++||||||. |+|+|
T Consensus 294 -----~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~---------------------PVI~s 347 (415)
T cd03816 294 -----KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGL---------------------PVCAL 347 (415)
T ss_pred -----CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCC---------------------CEEEe
Confidence 2478888889999999999999999864 335889999999999975 89999
Q ss_pred CCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHhhHhhhcCHHHHHHHHHH
Q 004411 474 EFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQME--NQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (755)
Q Consensus 474 e~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (755)
..+|+.+.+. +|++|+ |++++|++|.++++++ +++++.+.+..+++.+ .+|.+.+.+
T Consensus 348 ~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~~ 409 (415)
T cd03816 348 DFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWDR 409 (415)
T ss_pred CCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHHH
Confidence 9999888883 489994 9999999999999983 5566666666777664 445555443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.3e-18 Score=184.11 Aligned_cols=211 Identities=16% Similarity=0.091 Sum_probs=151.7
Q ss_pred hCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCC
Q 004411 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG 325 (755)
Q Consensus 246 ~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~ 325 (755)
.+|.|...+....+.+.. .|.. ...++.++|+|||++.|.+... ...+
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~--------------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~ 141 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK--------------IPQPIYVIPHNLNPRMFEYKPK-------------EKPH 141 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC--------------CCCCEEEECCCCCHHHcCCCcc-------------ccCC
Confidence 488888888766655543 1110 0135778999999988864210 0134
Q ss_pred ceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEE
Q 004411 326 KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIV 405 (755)
Q Consensus 326 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~ 405 (755)
+.++++++|+.+.||+..+|+|++++.+++|+++ |+++|. +.. +. + +. +-. .
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~-----~~~--~~--~---l~-------~~~---~-- 193 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS-----NML--DP--R---LF-------GLN---G-- 193 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC-----ccc--ch--h---hc-------ccc---c--
Confidence 5566677899999999999999999988877665 877772 111 11 1 10 100 1
Q ss_pred EecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--
Q 004411 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-- 483 (755)
Q Consensus 406 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-- 483 (755)
+.+.++.+++..+|+.||+||+||..||||++++||||||. |+|+|..+|.++.+.
T Consensus 194 -~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~---------------------PVIas~~gg~~E~i~~~ 251 (331)
T PHA01630 194 -VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL---------------------DVVVTEKGAWSEWVLSN 251 (331)
T ss_pred -eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCC---------------------CEEEeCCCCchhhccCC
Confidence 12467899999999999999999999999999999999975 899999988888773
Q ss_pred -CcEE--------------------eCCCCHHHHHHHHHHHhcCC-HHHHHHHHHH-HhhHhhhcCHHHHHHHHHHHHH
Q 004411 484 -GAIR--------------------VNPWNVDAVADAMDSALQME-NQEKILRHEK-HYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 484 -~ai~--------------------VnP~d~~~~A~ai~~aL~m~-~~er~~r~~~-~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
+|++ ++| |.+++++++.++|..+ +++++.+++. ...+.+++++...++++++-++
T Consensus 252 ~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 252 LDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred CceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 3444 455 7888999999999874 2344444444 4455678999999999988765
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.6e-18 Score=190.01 Aligned_cols=267 Identities=12% Similarity=0.070 Sum_probs=167.8
Q ss_pred HHHhCCCCCEEEEeCCccchH---HHHHHhhcCCCeEEEEEecCCCchhhhhcCC--ChHHHHHHhhhCCEEEEeCHHHH
Q 004411 184 MEVINPDEDYVWIHDYHLMVL---PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP--VRDEILKSLLNSDLIGFHTFDYA 258 (755)
Q Consensus 184 ~~~~~~~~DiVwvhDyhl~ll---p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp--~~~~il~~ll~~Dligf~t~~~~ 258 (755)
++..+| |+|++|+.-.+.. +..+++++ .. ++.++|+.|+ ++++... .....+...+ ..++
T Consensus 112 l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~--~Y~~~~~~g~~~~~l~~~~---------~~~~ 176 (462)
T PLN02846 112 IPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYL--EYVKREKNGRVKAFLLKYI---------NSWV 176 (462)
T ss_pred HHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChH--HHHHHhccchHHHHHHHHH---------HHHH
Confidence 344566 8999998855544 44555554 44 7779999885 3332211 1111111111 1122
Q ss_pred HHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-C-C--ceEEEEecc
Q 004411 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-D-G--KIVILGVDD 334 (755)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~-~--~~vil~VdR 334 (755)
+.| .|+.++..+... .+ +.. .+.+.+.|||++.|.+.... +++.+ + + .+++++|||
T Consensus 177 ~r~--~~d~vi~pS~~~-~~-----l~~---~~i~~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vGR 236 (462)
T PLN02846 177 VDI--YCHKVIRLSAAT-QD-----YPR---SIICNVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIGK 236 (462)
T ss_pred HHH--hcCEEEccCHHH-HH-----Hhh---CEEecCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEec
Confidence 222 144444433211 11 001 12223579999988754211 11222 2 2 357999999
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChh
Q 004411 335 MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414 (755)
Q Consensus 335 ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~ 414 (755)
|.+.||+..+|+||.++.+..|+++ |+++| +|++.++++ +++.+++. .++++.+..+.
T Consensus 237 L~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~----~~a~~l~l--------~~~vf~G~~~~- 294 (462)
T PLN02846 237 MVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVK----AAAEKLEL--------DVRVYPGRDHA- 294 (462)
T ss_pred CcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHH----HHHHhcCC--------cEEEECCCCCH-
Confidence 9999999999999999988888765 88887 567655544 45544321 13446664433
Q ss_pred hHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCC
Q 004411 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPW 491 (755)
Q Consensus 415 el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~ 491 (755)
.++|+.+||||+||..||||+|.+||||||. |+|+++..| .+.+. +|+.+ .
T Consensus 295 --~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~---------------------PVVa~~~~~-~~~v~~~~ng~~~--~ 348 (462)
T PLN02846 295 --DPLFHDYKVFLNPSTTDVVCTTTAEALAMGK---------------------IVVCANHPS-NEFFKQFPNCRTY--D 348 (462)
T ss_pred --HHHHHhCCEEEECCCcccchHHHHHHHHcCC---------------------cEEEecCCC-cceeecCCceEec--C
Confidence 3699999999999999999999999999975 889988876 46662 46666 4
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 492 NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 492 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
|.++++++|.++|+.++++... .. ...++|..=+++|++.++
T Consensus 349 ~~~~~a~ai~~~l~~~~~~~~~---~a---~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 349 DGKGFVRATLKALAEEPAPLTD---AQ---RHELSWEAATERFLRVAD 390 (462)
T ss_pred CHHHHHHHHHHHHccCchhHHH---HH---HHhCCHHHHHHHHHHHhc
Confidence 8999999999999865433211 11 236777777777776554
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-17 Score=183.84 Aligned_cols=264 Identities=14% Similarity=0.107 Sum_probs=172.9
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhc------CCChH------HHH----H-HhhhCCEEEEe
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT------LPVRD------EIL----K-SLLNSDLIGFH 253 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~------lp~~~------~il----~-~ll~~Dligf~ 253 (755)
.|+|++|...+. .++..+..+++..+..|.-. ++.|.. .|.+. ..+ + .+-.+|.|.+.
T Consensus 105 ~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~~ 179 (397)
T TIGR03087 105 VDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVD--SDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAARFDAATFV 179 (397)
T ss_pred CCEEEEeccccc---eeccccccCCCeEeehhhHH--HHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhhCCeEEEc
Confidence 499999854332 33433334567777777421 111111 11110 000 1 12356777777
Q ss_pred CHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEe
Q 004411 254 TFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGV 332 (755)
Q Consensus 254 t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~V 332 (755)
+....+.+... . .....++.++|+|||++.|.+..... ..+ .++++|+++
T Consensus 180 S~~~~~~l~~~----~---------------~~~~~~v~vipngvd~~~f~~~~~~~----------~~~~~~~~~ilf~ 230 (397)
T TIGR03087 180 SRAEAELFRRL----A---------------PEAAGRITAFPNGVDADFFSPDRDYP----------NPYPPGKRVLVFT 230 (397)
T ss_pred CHHHHHHHHHh----C---------------CCCCCCeEEeecccchhhcCCCcccc----------CCCCCCCcEEEEE
Confidence 77665554321 0 11123677899999999886532110 112 356789999
Q ss_pred ccccccCChHHHH----HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEec
Q 004411 333 DDMDLFKGISLKF----LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIK 408 (755)
Q Consensus 333 dRld~~KGi~~~l----~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~ 408 (755)
||+++.||+..++ .++..+.+++|+++ |+++|. +++ .+++++. .. ..|++.
T Consensus 231 G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~-----g~~-----~~~~~l~----~~------~~V~~~- 285 (397)
T TIGR03087 231 GAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGA-----KPS-----PAVRALA----AL------PGVTVT- 285 (397)
T ss_pred EecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECC-----CCh-----HHHHHhc----cC------CCeEEe-
Confidence 9999999999887 56667777888876 888873 222 1233332 11 136654
Q ss_pred CCCChhhHHHHHHhCcEEEEcCC-CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc--CCc
Q 004411 409 EPLSTQDKVPYYAIAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL--SGA 485 (755)
Q Consensus 409 ~~v~~~el~aly~~ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--~~a 485 (755)
|.++ ++..+|+.||++|+||. .||++++++||||||. |+|+|..++..... ..|
T Consensus 286 G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~---------------------PVV~t~~~~~~i~~~~~~g 342 (397)
T TIGR03087 286 GSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAK---------------------PVVASPEAAEGIDALPGAE 342 (397)
T ss_pred eecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCC---------------------CEEecCcccccccccCCcc
Confidence 5665 78999999999999997 5999999999999975 88888864322111 247
Q ss_pred EEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHHH
Q 004411 486 IRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDL 538 (755)
Q Consensus 486 i~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l 538 (755)
+++. .|++++|++|.++++++ +.++.+.++.++++. .+++...++++.+-+
T Consensus 343 ~lv~-~~~~~la~ai~~ll~~~-~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 343 LLVA-ADPADFAAAILALLANP-AEREELGQAARRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred eEeC-CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 8886 89999999999999864 466677778898885 689999888876654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.4e-17 Score=177.53 Aligned_cols=260 Identities=16% Similarity=0.185 Sum_probs=176.3
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHH-HHhhhCCEEEEeCHHHHHHHHHHHhhHh
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-KSLLNSDLIGFHTFDYARHFLSSCSRML 269 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il-~~ll~~Dligf~t~~~~~~Fl~~~~r~l 269 (755)
.|+|++|+...+.....+... .+.+..+++|........+. .....+. ..+..+|.|...+..+.+.+.. +
T Consensus 84 ~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~-----~ 155 (357)
T cd03795 84 ADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV-----L 155 (357)
T ss_pred CCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH-----h
Confidence 389999986644322222222 46788888996432211110 1111122 2456788888877766654432 0
Q ss_pred CccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHH
Q 004411 270 GLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMG 349 (755)
Q Consensus 270 g~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~ 349 (755)
+ ....++.++|+|+|...+.+... . .........++.+|+++||+.+.||+..+++|++
T Consensus 156 ~---------------~~~~~~~~i~~gi~~~~~~~~~~---~---~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~ 214 (357)
T cd03795 156 R---------------RFRDKVRVIPLGLDPARYPRPDA---L---EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAA 214 (357)
T ss_pred c---------------CCccceEEecCCCChhhcCCcch---h---hhHhhcCCCCCcEEEEecccccccCHHHHHHHHH
Confidence 1 01146788999999988764311 0 0111111246789999999999999999999998
Q ss_pred HHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEc
Q 004411 350 QLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVN 429 (755)
Q Consensus 350 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt 429 (755)
++. ++.|+++|. ++.. .++.+++.+.+.. ..|++ .+.++.+++..+|+.||++++|
T Consensus 215 ~l~--------~~~l~i~G~-----g~~~----~~~~~~~~~~~~~------~~V~~-~g~v~~~~~~~~~~~ad~~i~p 270 (357)
T cd03795 215 ALP--------DAPLVIVGE-----GPLE----AELEALAAALGLL------DRVRF-LGRLDDEEKAALLAACDVFVFP 270 (357)
T ss_pred hcc--------CcEEEEEeC-----ChhH----HHHHHHHHhcCCc------ceEEE-cCCCCHHHHHHHHHhCCEEEeC
Confidence 873 355887873 3332 2344444333211 13665 5799999999999999999999
Q ss_pred CC--CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC----CcEEeCCCCHHHHHHHHHHH
Q 004411 430 CV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS----GAIRVNPWNVDAVADAMDSA 503 (755)
Q Consensus 430 S~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----~ai~VnP~d~~~~A~ai~~a 503 (755)
|. .||+|++++|||+||. |+|+|+.+|..+.+. .|++++|.|+++++++|.++
T Consensus 271 s~~~~e~~g~~~~Ea~~~g~---------------------Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l 329 (357)
T cd03795 271 SVERSEAFGIVLLEAMAFGK---------------------PVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRL 329 (357)
T ss_pred CcccccccchHHHHHHHcCC---------------------CEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHH
Confidence 96 5999999999999975 899999998887662 48999999999999999999
Q ss_pred hcCCHHHHHHHHHHHhhHhhhc
Q 004411 504 LQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 504 L~m~~~er~~r~~~~~~~v~~~ 525 (755)
++++ ++++.+.++.++++.++
T Consensus 330 ~~~~-~~~~~~~~~~~~~~~~~ 350 (357)
T cd03795 330 LEDP-ELRERLGEAARERAEEE 350 (357)
T ss_pred HHCH-HHHHHHHHHHHHHHHHh
Confidence 9965 46666677778877653
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.7e-17 Score=174.34 Aligned_cols=240 Identities=14% Similarity=0.041 Sum_probs=162.1
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg 270 (755)
-|+|++|+....++ + .+..+.++.+++|..++... ..........+.+.+-+....+.+.
T Consensus 88 ~Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~--------~~~~~~~~~~~~~~~~s~~~~~~~~-------- 147 (335)
T cd03802 88 FDIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPEL--------LKLYYAARPDVPFVSISDAQRRPWP-------- 147 (335)
T ss_pred CCEEEecCcccchh---h-hcccCCCEEEEecCCCCccc--------chHHHhhCcCCeEEEecHHHHhhcc--------
Confidence 49999999887766 2 23457889999998764211 0122333444444433332221110
Q ss_pred ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHH
Q 004411 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (755)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (755)
.. .++.++|+|||++.|.+. ..++.+|+++||+.+.||+..+++|+++
T Consensus 148 ---------------~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 195 (335)
T cd03802 148 ---------------PL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR 195 (335)
T ss_pred ---------------cc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh
Confidence 00 467789999999988641 1245689999999999999999998754
Q ss_pred HHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
+++ .|+++|.. ++...+...+.+... ++ ..|.++ |.++.+++..+|+.||++++||
T Consensus 196 -----~~~----~l~i~G~~-----~~~~~~~~~~~~~~~-~~--------~~v~~~-G~~~~~~~~~~~~~~d~~v~ps 251 (335)
T cd03802 196 -----AGI----PLKLAGPV-----SDPDYFYREIAPELL-DG--------PDIEYL-GEVGGAEKAELLGNARALLFPI 251 (335)
T ss_pred -----cCC----eEEEEeCC-----CCHHHHHHHHHHhcc-cC--------CcEEEe-CCCCHHHHHHHHHhCcEEEeCC
Confidence 344 48878743 221222222222210 11 136655 6899999999999999999999
Q ss_pred C-CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcC
Q 004411 431 V-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQM 506 (755)
Q Consensus 431 ~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m 506 (755)
. .||||++++||||||. |+|+|+.+|..+.+. +|+++++ +++++++|.+++.+
T Consensus 252 ~~~E~~~~~~lEAma~G~---------------------PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~ 308 (335)
T cd03802 252 LWEEPFGLVMIEAMACGT---------------------PVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRL 308 (335)
T ss_pred cccCCcchHHHHHHhcCC---------------------CEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhcc
Confidence 7 5999999999999975 899999999998884 4899987 99999999998765
Q ss_pred CHHHHHHHHHHHhhHh-hhcCHHHHHHHHHH
Q 004411 507 ENQEKILRHEKHYKYI-SSHDVAYWAKSIDQ 536 (755)
Q Consensus 507 ~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~ 536 (755)
+.+ ..++++ .++++..-++++++
T Consensus 309 ~~~-------~~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 309 DRA-------ACRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHH-------HHHHHHHHhCCHHHHHHHHHH
Confidence 431 223333 45676666666654
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=175.07 Aligned_cols=196 Identities=17% Similarity=0.202 Sum_probs=143.4
Q ss_pred hhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc
Q 004411 244 LLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF 323 (755)
Q Consensus 244 ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~ 323 (755)
+..+|.|...+....+.+... .+ . ...++|+|+|.+.|.+..
T Consensus 151 ~~~~d~ii~~S~~~~~~~~~~----~~----------------~--~~~vi~~~~d~~~~~~~~---------------- 192 (351)
T cd03804 151 AARVDYFIANSRFVARRIKKY----YG----------------R--DATVIYPPVDTDRFTPAE---------------- 192 (351)
T ss_pred hcCCCEEEECCHHHHHHHHHH----hC----------------C--CcEEECCCCCHhhcCcCC----------------
Confidence 456788877777665555321 11 1 235689999998875421
Q ss_pred CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004411 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~p 403 (755)
..+++++++||+.+.||+..+++|++++ | ++ |+++|. +++.+++++ .. . ..
T Consensus 193 ~~~~~il~~G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~~----~----~~ 243 (351)
T cd03804 193 EKEDYYLSVGRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------KA----G----PN 243 (351)
T ss_pred CCCCEEEEEEcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------hc----C----CC
Confidence 2345799999999999999999999865 3 43 777873 343333322 11 1 13
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (755)
|.|+ |.++.+++.++|+.||++++||. ||||++++|||+||. |+|+|..+|..+.+.
T Consensus 244 V~~~-g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~---------------------Pvi~~~~~~~~e~i~ 300 (351)
T cd03804 244 VTFL-GRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASGT---------------------PVIAYGKGGALETVI 300 (351)
T ss_pred EEEe-cCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCC---------------------CEEEeCCCCCcceee
Confidence 7755 68999999999999999999999 999999999999975 899999999888773
Q ss_pred ---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHH
Q 004411 484 ---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKS 533 (755)
Q Consensus 484 ---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 533 (755)
.|++++|.|++++|++|..++++++. ..+.+++.+.++++.+..++
T Consensus 301 ~~~~G~~~~~~~~~~la~~i~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 301 DGVTGILFEEQTVESLAAAVERFEKNEDF----DPQAIRAHAERFSESRFREK 349 (351)
T ss_pred CCCCEEEeCCCCHHHHHHHHHHHHhCccc----CHHHHHHHHHhcCHHHHHHH
Confidence 49999999999999999999998741 12334445555665555543
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-16 Score=173.76 Aligned_cols=265 Identities=13% Similarity=0.013 Sum_probs=173.9
Q ss_pred CEEEEeCCccc--hHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHH-----HHhhhCCEEEEeCHHHHHHHHHH
Q 004411 192 DYVWIHDYHLM--VLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-----KSLLNSDLIGFHTFDYARHFLSS 264 (755)
Q Consensus 192 DiVwvhDyhl~--llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il-----~~ll~~Dligf~t~~~~~~Fl~~ 264 (755)
|+++||..... .+..++++. +.++.+.+|..-.....+.. ....++ ..+..+|.|...+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~~--~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRLK--GKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHhc--CCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH-
Confidence 55666654433 333334332 67888888853111111110 111121 1245678888877655444321
Q ss_pred HhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--CCceEEEEeccccccCChH
Q 004411 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFKGIS 342 (755)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~~KGi~ 342 (755)
..+ .. . .++|+|+|...+.+. ...++++ .+++.++++||+.+.||+.
T Consensus 161 ---~~~---------------~~-~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~ 209 (363)
T cd04955 161 ---KYG---------------RD-S--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNID 209 (363)
T ss_pred ---hcC---------------CC-C--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHH
Confidence 111 11 1 679999998766430 1122222 4556788999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHh
Q 004411 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI 422 (755)
Q Consensus 343 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ 422 (755)
.+++|+.++.. ++.|+++|... ...++.+.+.+ +. +.. ..|++ .|.++.+++..+|+.
T Consensus 210 ~li~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~---~~----~~~--~~V~~-~g~~~~~~~~~~~~~ 267 (363)
T cd04955 210 DLIEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKE---KA----AAD--PRIIF-VGPIYDQELLELLRY 267 (363)
T ss_pred HHHHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHH---Hh----CCC--CcEEE-ccccChHHHHHHHHh
Confidence 99999987632 34588888532 11223333332 11 111 13665 578999999999999
Q ss_pred CcEEEEcCCC-cCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHHHH
Q 004411 423 AECCVVNCVR-DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAM 500 (755)
Q Consensus 423 ADv~vvtS~~-EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ai 500 (755)
||++++||.. |||+++++|||+||. |+|+|..+|..+.+. +|..++|.|. +|++|
T Consensus 268 ad~~v~ps~~~e~~~~~~~EAma~G~---------------------PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i 324 (363)
T cd04955 268 AALFYLHGHSVGGTNPSLLEAMAYGC---------------------PVLASDNPFNREVLGDKAIYFKVGDD--LASLL 324 (363)
T ss_pred CCEEEeCCccCCCCChHHHHHHHcCC---------------------CEEEecCCccceeecCCeeEecCchH--HHHHH
Confidence 9999999999 999999999999975 899999998888774 6888988776 99999
Q ss_pred HHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHHHHHHHH
Q 004411 501 DSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDL 538 (755)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l 538 (755)
.++++++ +.+....++.++++.+ +++..-++++++.+
T Consensus 325 ~~l~~~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 325 EELEADP-EEVSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999976 3455556667777764 78888777776543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-16 Score=169.79 Aligned_cols=243 Identities=20% Similarity=0.174 Sum_probs=165.9
Q ss_pred CEEEEeCC-ccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhC
Q 004411 192 DYVWIHDY-HLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (755)
Q Consensus 192 DiVwvhDy-hl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg 270 (755)
|+|++|+. ...++..+. .+. +.++.+..|..++..... ..+........+..+|.+.+.+....+.+.... +
T Consensus 83 dii~~~~~~~~~~~~~~~-~~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----~ 155 (353)
T cd03811 83 DVVISHLTTTPNVLALLA-ARL-GTKLIVWEHNSLSLELKR-KLRLLLLIRKLYRRADKIVAVSEGVKEDLLKLL----G 155 (353)
T ss_pred CEEEEcCccchhHHHHHH-hhc-CCceEEEEcCcchhhhcc-chhHHHHHHhhccccceEEEeccchhhhHHHhh----c
Confidence 99999988 444444444 333 789999999887542211 111111223345678888888776665554311 1
Q ss_pred ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHH
Q 004411 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (755)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (755)
....++.++|+|+|...+.+.... . ..+ ....++.+++++||+++.||+..+++|+++
T Consensus 156 ---------------~~~~~~~vi~~~~~~~~~~~~~~~-----~-~~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~ 213 (353)
T cd03811 156 ---------------IPPDKIEVIYNPIDIEEIRALAEE-----P-LEL-GIPPDGPVILAVGRLSPQKGFDTLIRAFAL 213 (353)
T ss_pred ---------------CCccccEEecCCcChhhcCcccch-----h-hhc-CCCCCceEEEEEecchhhcChHHHHHHHHH
Confidence 113467889999999887653211 0 000 112567899999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
+.+++|+++ |+++|. ++...+ +.+++.+.+.. . .|.+. +. .+++..+|+.||+++.||
T Consensus 214 l~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~----~--~v~~~-g~--~~~~~~~~~~~d~~i~ps 271 (353)
T cd03811 214 LRKEGPDAR----LVILGD-----GPLREE----LEALAKELGLA----D--RVHFL-GF--QSNPYPYLKAADLFVLSS 271 (353)
T ss_pred hhhcCCCce----EEEEcC-----CccHHH----HHHHHHhcCCC----c--cEEEe-cc--cCCHHHHHHhCCEEEeCc
Confidence 988777665 887773 233223 33444444321 1 25554 44 457899999999999999
Q ss_pred CCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHH---HHHHHh
Q 004411 431 VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVAD---AMDSAL 504 (755)
Q Consensus 431 ~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~---ai~~aL 504 (755)
..||||++++|||+||. |+|+|+.+|..+.+. +|+++++.|.+++++ +|...+
T Consensus 272 ~~e~~~~~~~Ea~~~G~---------------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 330 (353)
T cd03811 272 RYEGFPNVLLEAMALGT---------------------PVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLL 330 (353)
T ss_pred ccCCCCcHHHHHHHhCC---------------------CEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhcc
Confidence 99999999999999975 899999999888873 489999999999954 444444
Q ss_pred cC
Q 004411 505 QM 506 (755)
Q Consensus 505 ~m 506 (755)
..
T Consensus 331 ~~ 332 (353)
T cd03811 331 LD 332 (353)
T ss_pred CC
Confidence 43
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-16 Score=172.56 Aligned_cols=194 Identities=17% Similarity=0.189 Sum_probs=144.2
Q ss_pred EEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccc--cCChHHHHHHHHHHHHh-CCCCCCcE
Q 004411 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL--FKGISLKFLAMGQLLEQ-HPDLRGKV 362 (755)
Q Consensus 289 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~--~KGi~~~l~A~~~ll~~-~P~~~~~v 362 (755)
.++.++|+|||.+.|.+... ...++.+ .++.+++.+++... .||+..+++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRDK--------REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCCcH--------HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 46788999999988854311 1233333 35566666666654 99999999999988665 344 4
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCC-hhhHHHHHHhCcEEEEcCCCcCCCcccee
Q 004411 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS-TQDKVPYYAIAECCVVNCVRDGMNLVPYK 441 (755)
Q Consensus 363 vLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~-~~el~aly~~ADv~vvtS~~EG~nLv~~E 441 (755)
.++++|.. +.... . .+ . ..|.++ +.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~-----~~~~~------~---~~----~----~~v~~~-g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGAS-----DPEIP------P---DL----P----FPVHYL-GSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCC-----chhhh------c---cC----C----CceEec-CCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 47777742 11100 0 11 1 135544 5777 88999999999999999999999999999
Q ss_pred eeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 004411 442 YTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKH 518 (755)
Q Consensus 442 a~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 518 (755)
||+||. |+|+|..+|..+.+. .|+++++.|++++|++|.+++..+ +++..+.++.
T Consensus 284 am~~g~---------------------PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~ 341 (365)
T cd03825 284 ALACGT---------------------PVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAA 341 (365)
T ss_pred HHhcCC---------------------CEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHH
Confidence 999975 899999988888873 489999999999999999999865 3556666677
Q ss_pred hhHhh-hcCHHHHHHHHHHHHH
Q 004411 519 YKYIS-SHDVAYWAKSIDQDLE 539 (755)
Q Consensus 519 ~~~v~-~~~~~~W~~~~l~~l~ 539 (755)
++++. .+++...++.+++-++
T Consensus 342 ~~~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 342 RELAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHHHhcCHHHHHHHHHHHHh
Confidence 77775 5889999888887654
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-15 Score=170.48 Aligned_cols=297 Identities=20% Similarity=0.167 Sum_probs=201.5
Q ss_pred CCEEEEeCCccchHHHHHHhh---cCCCeEEEEEecC-----CC-chhhhhcCCCh------------HHHH-HHhhhCC
Q 004411 191 EDYVWIHDYHLMVLPSFLRKR---FHRVKVGFFLHSP-----FP-SSEIYRTLPVR------------DEIL-KSLLNSD 248 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~---~~~~~i~~flH~P-----fP-~~e~~r~lp~~------------~~il-~~ll~~D 248 (755)
.|||++||||+.|+|.++++. ...++.+|+.|.- |+ .......||.- -..+ -++..||
T Consensus 131 pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad 210 (487)
T COG0297 131 PDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYAD 210 (487)
T ss_pred CCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheecc
Confidence 399999999999999999997 6789999999953 33 11112234410 0223 3467778
Q ss_pred EEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccC-----------chhHHHHH
Q 004411 249 LIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL-----------DVTGQKVK 317 (755)
Q Consensus 249 ligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~-----------~~~~~~~~ 317 (755)
.|.--++.|++.... ...| .|..++ ..-+..++.-|=+|||.+.+.+.... +...+...
T Consensus 211 ~vttVSptYa~Ei~t---~~~g------~gl~g~-l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 211 AVTTVSPTYAGEIYT---PEYG------EGLEGL-LSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred EEEEECHHHHHhhcc---cccc------ccchhh-hhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 888888888766541 1111 000000 01112455556678888776553210 01112223
Q ss_pred HHHHHc--C---CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 004411 318 ELKEKF--D---GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEI 392 (755)
Q Consensus 318 ~lr~~~--~---~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~I 392 (755)
.|++++ + +.+++..|+|++..||++.+++|+..++++. ++ ||++|.+ + ..++..+..++.++
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g------d-~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG------D-PELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC------c-HHHHHHHHHHHHhc
Confidence 466666 2 5689999999999999999999999999987 55 7778742 1 36778888998887
Q ss_pred hcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEE
Q 004411 393 NLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV 472 (755)
Q Consensus 393 n~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~ 472 (755)
..+.. +.-..+..-...+|+.||++++||..||+||+-+++|.-|+ ++|+
T Consensus 348 ~~~~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGt---------------------vpIv 397 (487)
T COG0297 348 PGRVL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGT---------------------LPIV 397 (487)
T ss_pred CceEE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCC---------------------cceE
Confidence 65321 22234566677899999999999999999999999999864 8899
Q ss_pred eCCCCcccccC-----------CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh--hhcCHHHHHHHHHHHHH
Q 004411 473 SEFIGCSPSLS-----------GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI--SSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 473 Se~~G~~~~l~-----------~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v--~~~~~~~W~~~~l~~l~ 539 (755)
++.+|.++.+. .|+++.|.|.++++.||.+|+..-..... .+++..... ..+++..=+++|..--+
T Consensus 398 ~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~~lY~ 476 (487)
T COG0297 398 RETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYVELYK 476 (487)
T ss_pred cccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHHHHHH
Confidence 99999988773 27899888999999999999875432111 022222222 35677777777776555
Q ss_pred HH
Q 004411 540 RA 541 (755)
Q Consensus 540 ~~ 541 (755)
..
T Consensus 477 ~~ 478 (487)
T COG0297 477 PL 478 (487)
T ss_pred HH
Confidence 44
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.5e-15 Score=171.58 Aligned_cols=286 Identities=15% Similarity=0.169 Sum_probs=177.7
Q ss_pred HHHHHHhCCCCCEEEEeCCccchHHHHHHh-hcCCCeEEEEEecCCC-chhhhhcCCChHHHHHHhh-hCCEEEEeCHHH
Q 004411 181 DKVMEVINPDEDYVWIHDYHLMVLPSFLRK-RFHRVKVGFFLHSPFP-SSEIYRTLPVRDEILKSLL-NSDLIGFHTFDY 257 (755)
Q Consensus 181 ~~i~~~~~~~~DiVwvhDyhl~llp~~lr~-~~~~~~i~~flH~PfP-~~e~~r~lp~~~~il~~ll-~~Dligf~t~~~ 257 (755)
.++++..+| |+|++|.+.++ |.++.. +..++++.++.|.-.+ +...++.+ ..+.+.++ .+|.|..++...
T Consensus 117 ~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~ 189 (425)
T PRK05749 117 RRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEED 189 (425)
T ss_pred HHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHH
Confidence 345566677 89999977754 444332 2235777766554322 12222211 22333333 479999999988
Q ss_pred HHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEecccc
Q 004411 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMD 336 (755)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld 336 (755)
.+.|.+ +|+. .. |.++|++ +.+.+... ........+++++ +++++++++++.
T Consensus 190 ~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~~~----~~~~~~~~~r~~~~~~~~vil~~~~~- 242 (425)
T PRK05749 190 AERFLA-----LGAK---------------NE-VTVTGNL-KFDIEVPP----ELAARAATLRRQLAPNRPVWIAASTH- 242 (425)
T ss_pred HHHHHH-----cCCC---------------CC-cEecccc-cccCCCCh----hhHHHHHHHHHHhcCCCcEEEEeCCC-
Confidence 877764 2321 12 4455653 33332211 1112234566777 678889999875
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC-CCCC-----ccEEEecCC
Q 004411 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFG-KPGY-----EPIVIIKEP 410 (755)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g-~~~~-----~pV~~~~~~ 410 (755)
.|+...+++||.++++++|+++ |+++| ++++. .+++.+++++.+..+. ..++ ...+++.+
T Consensus 243 -~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~- 308 (425)
T PRK05749 243 -EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGD- 308 (425)
T ss_pred -chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEe-
Confidence 5889999999999988899876 77766 34442 1234444444322110 0000 01222322
Q ss_pred CChhhHHHHHHhCcEEEE-cCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCc-cc---cc-CC
Q 004411 411 LSTQDKVPYYAIAECCVV-NCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC-SP---SL-SG 484 (755)
Q Consensus 411 v~~~el~aly~~ADv~vv-tS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~-~~---~l-~~ 484 (755)
+..|+..+|+.||++++ +|..||+|++++|||+||. |+|++...|. .+ .+ .+
T Consensus 309 -~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~---------------------PVI~g~~~~~~~e~~~~~~~~ 366 (425)
T PRK05749 309 -TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV---------------------PVISGPHTFNFKEIFERLLQA 366 (425)
T ss_pred -cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC---------------------CEEECCCccCHHHHHHHHHHC
Confidence 36799999999999666 6888999999999999974 7888765443 22 22 35
Q ss_pred cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 485 AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 485 ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
|.++.|.|++++|++|.++++++ +.+..+.++.++++.++ ..=.++.++.+.
T Consensus 367 g~~~~~~d~~~La~~l~~ll~~~-~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~ 418 (425)
T PRK05749 367 GAAIQVEDAEDLAKAVTYLLTDP-DARQAYGEAGVAFLKQN--QGALQRTLQLLE 418 (425)
T ss_pred CCeEEECCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhC--ccHHHHHHHHHH
Confidence 78888999999999999999854 56777778889998776 233344444444
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.5e-16 Score=172.66 Aligned_cols=236 Identities=10% Similarity=-0.021 Sum_probs=155.5
Q ss_pred CEEEEeCCccch--HHHHHHhhcCCCeEEEEEecCCCchhhhhc-C---CC----hHHHHHHh-hhCCEEEEeCHHHHHH
Q 004411 192 DYVWIHDYHLMV--LPSFLRKRFHRVKVGFFLHSPFPSSEIYRT-L---PV----RDEILKSL-LNSDLIGFHTFDYARH 260 (755)
Q Consensus 192 DiVwvhDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~~r~-l---p~----~~~il~~l-l~~Dligf~t~~~~~~ 260 (755)
|+|++|..+.+. ++..+-.+..++|+.+++|..+.+ .+.. . +. ...+.+.+ -.+|.|...+....+.
T Consensus 102 DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~~ 179 (371)
T PLN02275 102 DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQHE 179 (371)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 899999877532 233333333468899899975421 1100 0 10 01111222 3467777777665544
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCC
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 340 (755)
..+. . |.. +.++|+|+ .+.|.+.... ..++ .+.+.+++++||+.+.||
T Consensus 180 l~~~----~----------------g~~--i~vi~n~~-~~~f~~~~~~-------~~~~--~~~~~~i~~~grl~~~k~ 227 (371)
T PLN02275 180 LDQN----W----------------GIR--ATVLYDQP-PEFFRPASLE-------IRLR--PNRPALVVSSTSWTPDED 227 (371)
T ss_pred HHHh----c----------------CCC--eEEECCCC-HHHcCcCCch-------hccc--CCCcEEEEEeCceeccCC
Confidence 4320 0 111 57788884 5667543110 1111 134567889999999999
Q ss_pred hHHHHHHHHHHHH-----------------hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004411 341 ISLKFLAMGQLLE-----------------QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (755)
Q Consensus 341 i~~~l~A~~~ll~-----------------~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~p 403 (755)
+..+++|+..+.. ++|+ +.|+++| +|++.+++ ++++++.+. ..
T Consensus 228 ~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l----~~~~~~~~l-------~~ 287 (371)
T PLN02275 228 FGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMY----EEKISRLNL-------RH 287 (371)
T ss_pred HHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHH----HHHHHHcCC-------Cc
Confidence 9999999988742 3455 4588888 45554444 444444322 24
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcC---CCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccc
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNC---VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS---~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (755)
|+++.+.++.+++..+|+.||+||+|+ ..|||+++.+||||||. |+|+|..+|..+
T Consensus 288 v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~---------------------PVVa~~~gg~~e 346 (371)
T PLN02275 288 VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGL---------------------PVCAVSYSCIGE 346 (371)
T ss_pred eEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCC---------------------CEEEecCCChHH
Confidence 787777889999999999999999753 24899999999999975 899999989888
Q ss_pred ccC---CcEEeCCCCHHHHHHHHHHHh
Q 004411 481 SLS---GAIRVNPWNVDAVADAMDSAL 504 (755)
Q Consensus 481 ~l~---~ai~VnP~d~~~~A~ai~~aL 504 (755)
.+. +|++|+ |++++|++|.++|
T Consensus 347 iv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 347 LVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred HccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 883 489996 6999999998765
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.8e-16 Score=159.40 Aligned_cols=158 Identities=24% Similarity=0.312 Sum_probs=116.9
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCCceeE
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEI 666 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w~~ 666 (755)
||++|+||||++. ....++++++++|++|+++ +..++++|||+...+.+++..+ +.++|++||++++.+++..|..
T Consensus 1 li~~D~DgTL~~~--~~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~~ 76 (204)
T TIGR01484 1 LLFFDLDGTLLDP--NAHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYIE 76 (204)
T ss_pred CEEEeCcCCCcCC--CCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEEc
Confidence 6899999999983 2267899999999999985 6899999999999999999875 4789999999999865444543
Q ss_pred cccCcCccHHH------HHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhc-CCCeEEE-e
Q 004411 667 CSLTRDFDWKE------IAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLA-NEPVVVK-R 738 (755)
Q Consensus 667 ~~~~~~~~w~~------~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~-~~~~~V~-s 738 (755)
....|.+ .+..++..+....++..+|.+...+.+||+.. +.......++...++.... ...+.+. +
T Consensus 77 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 150 (204)
T TIGR01484 77 ----PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGA--ELGQELDSKMRERLEKIGRNDLELEAIYV 150 (204)
T ss_pred ----ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEecc--chhhHHHHHHHHHHHhhccccCcEEEEEe
Confidence 1122322 22344444556778889999999999999875 1111233455555554422 1357777 7
Q ss_pred cCeEEEEEeCCCCCCC
Q 004411 739 GQHIVEVKPQVCQHQS 754 (755)
Q Consensus 739 G~~~VEV~p~gvnKG~ 754 (755)
|..++||+|+++|||.
T Consensus 151 ~~~~~ev~p~~~~K~~ 166 (204)
T TIGR01484 151 GKTDLEVLPAGVDKGS 166 (204)
T ss_pred cCCEEEEecCCCChHH
Confidence 9999999999999985
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-15 Score=149.54 Aligned_cols=155 Identities=21% Similarity=0.326 Sum_probs=119.1
Q ss_pred CCceEEEEeccccccCChHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004411 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ-HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~ 402 (755)
.++++|+++||+++.||+..+++|+..+.++ .|++. |+++|. ++. ...+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~-----~~~----~~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVGD-----GEY----KKELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEESH-----CCH----HHHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEcc-----ccc----cccccccccccccc------c
Confidence 5789999999999999999999999999875 66654 877762 222 23344444443321 1
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004411 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (755)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (755)
.|.+++ .++.+++.++|+.||+++.||..||+|++++|||+||. |+|+|..+|..+.+
T Consensus 74 ~i~~~~-~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~---------------------pvI~~~~~~~~e~~ 131 (172)
T PF00534_consen 74 NIIFLG-YVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC---------------------PVIASDIGGNNEII 131 (172)
T ss_dssp TEEEEE-SHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT----------------------EEEEESSTHHHHHS
T ss_pred cccccc-cccccccccccccceecccccccccccccccccccccc---------------------ceeeccccCCceee
Confidence 377664 66789999999999999999999999999999999964 89999988888877
Q ss_pred C---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhh
Q 004411 483 S---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYK 520 (755)
Q Consensus 483 ~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 520 (755)
. .|++++|.|+++++++|.+++.++ +.+....++.++
T Consensus 132 ~~~~~g~~~~~~~~~~l~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 132 NDGVNGFLFDPNDIEELADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp GTTTSEEEESTTSHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred ccccceEEeCCCCHHHHHHHHHHHHCCH-HHHHHHHHHhcC
Confidence 3 479999999999999999999976 344444444443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.3e-14 Score=149.82 Aligned_cols=221 Identities=18% Similarity=0.237 Sum_probs=161.0
Q ss_pred CCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEE
Q 004411 213 HRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIK 292 (755)
Q Consensus 213 ~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~ 292 (755)
.+.++.|+-|.-|--.++- +.+-..++-|. |...+|.+++++.++.+.. +.-.-...+|.
T Consensus 113 MGlktVfTdHSlfGfad~~-----------si~~n~ll~~s--------L~~id~~IcVshtskentv-lr~~L~p~kvs 172 (426)
T KOG1111|consen 113 MGLKTVFTDHSLFGFADIG-----------SILTNKLLPLS--------LANIDRIICVSHTSKENTV-LRGALAPAKVS 172 (426)
T ss_pred cCceEEEeccccccccchh-----------hhhhcceeeee--------ecCCCcEEEEeecCCCceE-EEeccCHhHee
Confidence 4589999999865322111 11111222221 3345677788888876532 22222345889
Q ss_pred EEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 004411 293 ILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA 371 (755)
Q Consensus 293 v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 371 (755)
++||-+++..|.|.... +. .+...|+.++||-+.||+++++.++.++-++||+.+ ++++|
T Consensus 173 vIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fii~G--- 233 (426)
T KOG1111|consen 173 VIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FIIIG--- 233 (426)
T ss_pred eccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EEEec---
Confidence 99999999999885321 22 345889999999999999999999999999999987 88777
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCc
Q 004411 372 RSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPV 451 (755)
Q Consensus 372 r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~ 451 (755)
+||..-.+++.+++. +. + .+|+++ |.++.+++...|...|||+.||+.|.|+++.+||+.||.
T Consensus 234 --DGPk~i~lee~lEk~----~l--~----~rV~~l-G~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL---- 296 (426)
T KOG1111|consen 234 --DGPKRIDLEEMLEKL----FL--Q----DRVVML-GTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGL---- 296 (426)
T ss_pred --CCcccchHHHHHHHh----hc--c----CceEEe-cccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCC----
Confidence 566544444333333 21 1 257765 689999999999999999999999999999999999975
Q ss_pred cccccCCCCCCCCCCCceEEEeCCCCcccccCCc-EEeCCCCHHHHHHHHHHHhcC
Q 004411 452 LDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGA-IRVNPWNVDAVADAMDSALQM 506 (755)
Q Consensus 452 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-i~VnP~d~~~~A~ai~~aL~m 506 (755)
++|.+..+|..+.|... +..-+-.++++++++.+|++.
T Consensus 297 -----------------~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~ 335 (426)
T KOG1111|consen 297 -----------------PVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITK 335 (426)
T ss_pred -----------------EEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHH
Confidence 78888889999888644 435555788888888888764
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.8e-13 Score=147.88 Aligned_cols=266 Identities=12% Similarity=0.091 Sum_probs=164.6
Q ss_pred CCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHH-HHHhhhCCEEEEeCHHHHHHHHHHHh
Q 004411 188 NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEI-LKSLLNSDLIGFHTFDYARHFLSSCS 266 (755)
Q Consensus 188 ~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~i-l~~ll~~Dligf~t~~~~~~Fl~~~~ 266 (755)
+.++.++|.+..-...+... .+..++++-+|--|+..... -+....+ -+.+-.||+|...+....+.+..
T Consensus 100 ~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~--- 170 (373)
T cd04950 100 GFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR--- 170 (373)
T ss_pred CCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh---
Confidence 44457888875544444333 45567777666444321110 0111011 22345688888777765543221
Q ss_pred hHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHH
Q 004411 267 RMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFL 346 (755)
Q Consensus 267 r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~ 346 (755)
+ + .++.++|+|+|.+.|.+....+ .. .+.+ ...++++|+++|++...+++. +|.
T Consensus 171 -----------------~-~--~~i~~i~ngvd~~~f~~~~~~~-~~--~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~ 224 (373)
T cd04950 171 -----------------L-N--PNVVLVPNGVDYEHFAAARDPP-PP--PADL--AALPRPVIGYYGAIAEWLDLE-LLE 224 (373)
T ss_pred -----------------C-C--CCEEEcccccCHHHhhcccccC-CC--hhHH--hcCCCCEEEEEeccccccCHH-HHH
Confidence 1 1 3567899999999997542211 10 1111 124678999999999966654 444
Q ss_pred HHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEE
Q 004411 347 AMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECC 426 (755)
Q Consensus 347 A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 426 (755)
+ +.+.+|+++ |++||... ...+ ...+ .. ...|+++ |.++.+++.++|+.||++
T Consensus 225 ~---la~~~p~~~----~vliG~~~-----~~~~----~~~~----~~------~~nV~~~-G~~~~~~l~~~l~~~Dv~ 277 (373)
T cd04950 225 A---LAKARPDWS----FVLIGPVD-----VSID----PSAL----LR------LPNVHYL-GPKPYKELPAYLAGFDVA 277 (373)
T ss_pred H---HHHHCCCCE----EEEECCCc-----CccC----hhHh----cc------CCCEEEe-CCCCHHHHHHHHHhCCEE
Confidence 3 345688876 88888421 1001 0111 00 1247765 689999999999999999
Q ss_pred EEcCCC-----cCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHH
Q 004411 427 VVNCVR-----DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMD 501 (755)
Q Consensus 427 vvtS~~-----EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~ 501 (755)
++|+.. .++++..+||||||. |+|+|.+.++.+.. ++..+.+.|+++++++|.
T Consensus 278 l~P~~~~~~~~~~~P~Kl~EylA~G~---------------------PVVat~~~~~~~~~-~~~~~~~~d~~~~~~ai~ 335 (373)
T cd04950 278 ILPFRLNELTRATSPLKLFEYLAAGK---------------------PVVATPLPEVRRYE-DEVVLIADDPEEFVAAIE 335 (373)
T ss_pred ecCCccchhhhcCCcchHHHHhccCC---------------------CEEecCcHHHHhhc-CcEEEeCCCHHHHHHHHH
Confidence 999863 577899999999975 78888765544332 344455669999999999
Q ss_pred HHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHH
Q 004411 502 SALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (755)
++|..+..++..+ ..+.+.+|+|..=++.+++.|..
T Consensus 336 ~~l~~~~~~~~~~---~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 336 KALLEDGPARERR---RLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHhcCCchHHHH---HHHHHHHCCHHHHHHHHHHHHHh
Confidence 9887654343332 22268889999888888866543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.8e-13 Score=140.73 Aligned_cols=161 Identities=16% Similarity=0.171 Sum_probs=103.2
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecCCC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNS 662 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~~~ 662 (755)
..|+|++|+||||++ .+..++++++++|+++.+ ++..|+|+|||++..+.+.+..+. +..+|++||+++.+.++.
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLD---SNKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 479999999999999 456699999999999986 599999999999999999998773 236999999999988322
Q ss_pred ceeEcccCcCccHHHHHHHHHHHHhcC--CCCcEEeecceEEEE-----------------EeccCC--CC-------cc
Q 004411 663 AWEICSLTRDFDWKEIAEPVMKLYTET--TDGSFIEDKETAIVW-----------------HHQHAD--PH-------FG 714 (755)
Q Consensus 663 ~w~~~~~~~~~~w~~~v~~i~~~y~~~--t~gs~iE~k~~~l~~-----------------hyr~ad--~~-------~~ 714 (755)
.... ..+ ++.+..+++..... ....+.......... .....+ .+ ..
T Consensus 78 i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQK---PLS---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred Eeee---cCC---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 2222 222 45566666544221 111111111000000 000000 00 01
Q ss_pred hhhHHHHHHHHHHHhcCCCeEEEecCeE-EEEEeCCCCCCC
Q 004411 715 SCQAKELLDHLENVLANEPVVVKRGQHI-VEVKPQVCQHQS 754 (755)
Q Consensus 715 ~~qa~el~~~L~~~l~~~~~~V~sG~~~-VEV~p~gvnKG~ 754 (755)
.....++...+.+.+.+..+.+.++..+ +||.|+|+|||+
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~ 192 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGY 192 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHH
Confidence 2233455566666666555667766555 999999999984
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.4e-13 Score=137.85 Aligned_cols=168 Identities=15% Similarity=0.138 Sum_probs=100.4
Q ss_pred cCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC--CCc-eEEcCCceEEEec
Q 004411 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EKL-GLSAEHGYFTRWS 659 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i--~~l-~liaenGa~i~~~ 659 (755)
.+.|+|++|+||||++ .++.++++++++|++|.+ .|+.|+|+|||++..+.+.++.. ..+ ++|+.||+.|+..
T Consensus 3 ~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK---PRNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 3579999999999998 567789999999999997 59999999999999999988632 222 5799999999864
Q ss_pred CCCceeEccc-CcCccHHHHHHHHHHHH-----hcCCCCcEEeecceEEEEEeccCCC------C---cc--hhhHHHHH
Q 004411 660 KNSAWEICSL-TRDFDWKEIAEPVMKLY-----TETTDGSFIEDKETAIVWHHQHADP------H---FG--SCQAKELL 722 (755)
Q Consensus 660 ~~~~w~~~~~-~~~~~w~~~v~~i~~~y-----~~~t~gs~iE~k~~~l~~hyr~ad~------~---~~--~~qa~el~ 722 (755)
++..+..... ..+.++...+....+.+ .....+.|++.........+..... + +. .....++.
T Consensus 79 ~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (247)
T PTZ00174 79 GELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFI 158 (247)
T ss_pred CeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHH
Confidence 3222222111 12222222222222221 1123345554332111111100000 0 00 11223566
Q ss_pred HHHHHHhcCCCeEEEe-cCeEEEEEeCCCCCCC
Q 004411 723 DHLENVLANEPVVVKR-GQHIVEVKPQVCQHQS 754 (755)
Q Consensus 723 ~~L~~~l~~~~~~V~s-G~~~VEV~p~gvnKG~ 754 (755)
+.+.+.+.+..+...+ |..++||.|+|+|||+
T Consensus 159 ~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~ 191 (247)
T PTZ00174 159 QDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTY 191 (247)
T ss_pred HHHHHhcCCCCeEEEecCceEEEeeeCCCcHHH
Confidence 6666665443344443 5689999999999984
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-11 Score=137.71 Aligned_cols=191 Identities=14% Similarity=0.130 Sum_probs=125.7
Q ss_pred EEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCChHHHHHHHHHHHHh----CCCCCCc
Q 004411 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ----HPDLRGK 361 (755)
Q Consensus 289 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~----~P~~~~~ 361 (755)
.+|.+++++|+.+.+.+. . ...++++++ +++++|+.+||....||+...++++..++.. .|+.+
T Consensus 173 ~ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~-- 243 (382)
T PLN02605 173 SQIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ-- 243 (382)
T ss_pred HHEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce--
Confidence 356667888886543321 1 123466666 4688999999999999999999999876521 34332
Q ss_pred EEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCcccee
Q 004411 362 VVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYK 441 (755)
Q Consensus 362 vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~E 441 (755)
++.+++ +++ ++++++.+... + ..|.++ |++ +++..+|++||++|.+| .++++.|
T Consensus 244 --~~vi~G----~~~---~~~~~L~~~~~------~----~~v~~~-G~~--~~~~~l~~aaDv~V~~~----g~~ti~E 297 (382)
T PLN02605 244 --VVVICG----RNK---KLQSKLESRDW------K----IPVKVR-GFV--TNMEEWMGACDCIITKA----GPGTIAE 297 (382)
T ss_pred --EEEEEC----CCH---HHHHHHHhhcc------c----CCeEEE-ecc--ccHHHHHHhCCEEEECC----CcchHHH
Confidence 333442 222 22333333210 1 136654 455 47999999999999866 3789999
Q ss_pred eeecccCCCccccccCCCCCCCCCCCceEEEeCCC-----Cccccc-CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 004411 442 YTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-----GCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRH 515 (755)
Q Consensus 442 a~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-----G~~~~l-~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~ 515 (755)
||+||. |+|++... |..+.+ .+|.-+.+.|+++++++|.+++.++++.++.+.
T Consensus 298 Ama~g~---------------------PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~ 356 (382)
T PLN02605 298 ALIRGL---------------------PIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMS 356 (382)
T ss_pred HHHcCC---------------------CEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence 999975 78888752 333334 343344468999999999999997555666666
Q ss_pred HHHhhHhhhcCHHHHHHHHH
Q 004411 516 EKHYKYISSHDVAYWAKSID 535 (755)
Q Consensus 516 ~~~~~~v~~~~~~~W~~~~l 535 (755)
+..+++...+.+..-++..+
T Consensus 357 ~~~~~~~~~~a~~~i~~~l~ 376 (382)
T PLN02605 357 ENALKLARPEAVFDIVHDLH 376 (382)
T ss_pred HHHHHhcCCchHHHHHHHHH
Confidence 67788777776665555444
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.7e-12 Score=135.61 Aligned_cols=161 Identities=16% Similarity=0.166 Sum_probs=100.5
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC-C-C-ceEEcCCceEEEecCC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV-E-K-LGLSAEHGYFTRWSKN 661 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i-~-~-l~liaenGa~i~~~~~ 661 (755)
++++|+|+||||++ .++..+++++++|++|.+ +..|+++|||++..+.+.|+.. . . ..+|++||+++...++
T Consensus 7 ~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l~~--~i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~ 81 (245)
T PLN02423 7 GVIALFDVDGTLTA---PRKEATPEMLEFMKELRK--VVTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGK 81 (245)
T ss_pred ceEEEEeccCCCcC---CCCcCCHHHHHHHHHHHh--CCEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCE
Confidence 45667999999998 456788999999999995 3899999999999999988764 2 2 3689999999985432
Q ss_pred CceeEcc-cCcCccHHHHHHHHHHHHh--------cCCCCcEEeecceEEEEE--eccCCC----------CcchhhHHH
Q 004411 662 SAWEICS-LTRDFDWKEIAEPVMKLYT--------ETTDGSFIEDKETAIVWH--HQHADP----------HFGSCQAKE 720 (755)
Q Consensus 662 ~~w~~~~-~~~~~~w~~~v~~i~~~y~--------~~t~gs~iE~k~~~l~~h--yr~ad~----------~~~~~qa~e 720 (755)
....... ...+ .+.++++++... ....+++++..+..+.+. +.++.. .. .....+
T Consensus 82 ~i~~~~l~~~l~---~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i-~~~~~~ 157 (245)
T PLN02423 82 LIGTQSLKSFLG---EDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKV-HNIRPK 157 (245)
T ss_pred EEEEecccccCC---HHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCcc-chHHHH
Confidence 2121111 1122 234444443221 123466776443322221 222200 01 122345
Q ss_pred HHHHHHHHhcCCCeE-EEecCeEEEEEeCCCCCCC
Q 004411 721 LLDHLENVLANEPVV-VKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 721 l~~~L~~~l~~~~~~-V~sG~~~VEV~p~gvnKG~ 754 (755)
+...+.+.+.+..+. +.+|..||||+|+|+|||.
T Consensus 158 ~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~ 192 (245)
T PLN02423 158 MVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTY 192 (245)
T ss_pred HHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHH
Confidence 666676766542333 3367799999999999984
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.5e-13 Score=138.34 Aligned_cols=158 Identities=15% Similarity=0.228 Sum_probs=104.4
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC----CCceEEcCCceEEEecC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV----EKLGLSAEHGYFTRWSK 660 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i----~~l~liaenGa~i~~~~ 660 (755)
+.+|++||||||++....+...++++.++++++.+ +++.++++|||+...+++....+ |+ .+|++||+.|+.++
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~ 78 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGG 78 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCC
Confidence 35899999999998433346677999999999996 58899999999999988885432 22 38899999998753
Q ss_pred C----CceeEcccCcCccHH-HHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcC--CC
Q 004411 661 N----SAWEICSLTRDFDWK-EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLAN--EP 733 (755)
Q Consensus 661 ~----~~w~~~~~~~~~~w~-~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~--~~ 733 (755)
. ..|.. .....|. +.+..+...+...++....+++...+.+.+... ++.++...+.+.+.. ..
T Consensus 79 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~~~ 148 (249)
T TIGR01485 79 AEVPDQHWAE---YLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETGLD 148 (249)
T ss_pred CCcCCHHHHH---HHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcCCC
Confidence 1 11211 1123343 334555555555555555566667777764421 122334444444432 23
Q ss_pred eE-EEecCeEEEEEeCCCCCCC
Q 004411 734 VV-VKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 734 ~~-V~sG~~~VEV~p~gvnKG~ 754 (755)
+. +.+|..++||+|+++|||.
T Consensus 149 ~~~~~~~~~~ldi~~~~~~K~~ 170 (249)
T TIGR01485 149 VKLIYSSGKDLDILPQGSGKGQ 170 (249)
T ss_pred EEEEEECCceEEEEeCCCChHH
Confidence 34 4688899999999999984
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.3e-12 Score=134.70 Aligned_cols=71 Identities=21% Similarity=0.245 Sum_probs=62.0
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEec
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~ 659 (755)
.|+|++|+||||++ .++.++++++++|++|.+ +|..|+++|||++..+.+.+..+. +.++|+.||+.|+..
T Consensus 2 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~ 73 (272)
T PRK15126 2 ARLAAFDMDGTLLM---PDHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSL 73 (272)
T ss_pred ccEEEEeCCCcCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcC
Confidence 58999999999998 456799999999999996 599999999999999999887652 346899999999864
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.4e-12 Score=132.43 Aligned_cols=71 Identities=20% Similarity=0.200 Sum_probs=62.0
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEec
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~ 659 (755)
+|+|++|+||||++ .++.++++++++|++|.+ +|..|+|+|||++..+.+.+..++ +.++|+.||+.++..
T Consensus 2 ikli~~DlDGTLl~---~~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~ 73 (266)
T PRK10976 2 YQVVASDLDGTLLS---PDHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDT 73 (266)
T ss_pred ceEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECC
Confidence 58999999999998 456789999999999996 599999999999999998887663 346899999999864
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.4e-11 Score=131.26 Aligned_cols=185 Identities=12% Similarity=0.114 Sum_probs=140.1
Q ss_pred CceEEEEeccccccCChHHHHHHHHHHHHhCCCCC-CcEEEEEEecC-CCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004411 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR-GKVVLVQITNP-ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p-~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~ 402 (755)
.+.+...+-|+.+-||+...|.||..+...-|+.. ....++..+++ ..+...+..++.+++.+++++.+. +|
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l-~g----- 345 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL-LG----- 345 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc-cC-----
Confidence 37789999999999999999999999988775411 12334444432 223334455667788888877532 23
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004411 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (755)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (755)
.++++..+.++.+...+++.+.+..+++..|.||+|++|||+||. |+|++..+|..+++
T Consensus 346 ~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~gl---------------------PvvAt~~GGP~EiV 404 (495)
T KOG0853|consen 346 QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGL---------------------PVVATNNGGPAEIV 404 (495)
T ss_pred ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCC---------------------CEEEecCCCceEEE
Confidence 255565677888888888888888888888999999999999975 89999999999998
Q ss_pred C---CcEEeCCCCHH---HHHHHHHHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHHHHHHHHHHHH
Q 004411 483 S---GAIRVNPWNVD---AVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDLERAC 542 (755)
Q Consensus 483 ~---~ai~VnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~ 542 (755)
. +|++++| +.+ .+|++|.++.+.|. .+.++.++++++|.+ +++ +.|.+.+....
T Consensus 405 ~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~ 465 (495)
T KOG0853|consen 405 VHGVTGLLIDP-GQEAVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSW----QHYSERIASVL 465 (495)
T ss_pred EcCCcceeeCC-chHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhH----HHHHHHHHHHh
Confidence 3 6999999 666 59999999999875 477778889999988 665 44555554443
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.2e-11 Score=127.83 Aligned_cols=72 Identities=18% Similarity=0.232 Sum_probs=62.0
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC----CceEEcCCceEEEec
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE----KLGLSAEHGYFTRWS 659 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~----~l~liaenGa~i~~~ 659 (755)
++|+|++|+||||++ .++.++++++++|++|.+ .|..|+|+|||++..+...+..+. ..++|+.||+.|+..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 2 AIKLIAIDMDGTLLL---PDHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred ceEEEEEecCCcCcC---CCCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 368999999999998 456789999999999996 599999999999999998887653 135899999999863
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.8e-11 Score=124.46 Aligned_cols=197 Identities=21% Similarity=0.314 Sum_probs=142.3
Q ss_pred EEEEEeccCCccccccc-ccCchhHHHHHHHHHHcCC--ceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEE
Q 004411 290 SIKILPVGIHMGQFESI-MSLDVTGQKVKELKEKFDG--KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (755)
Q Consensus 290 ~i~v~p~GId~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (755)
.+.++|+|+++..+... .. ...+ +.+++++||+.+.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56778999999988642 00 0112 47899999999999999999999999877666 34666
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 367 i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
+|... +. ...+..++...+.. ..|.+ .+.++.+++..+|+.||+++.||..||||++.+|||+||
T Consensus 236 ~g~~~-----~~---~~~~~~~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGP-----ER---REELEKLAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCC-----cc---HHHHHHHHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 66432 11 12233344443321 13555 567888899999999999999999999999999999996
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-C--cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh-
Q 004411 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-G--AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI- 522 (755)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v- 522 (755)
. |+|+|...|..+.+. + |+++++.|.+++++++..++++. +.+....+..++.+
T Consensus 301 ~---------------------pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~ 358 (381)
T COG0438 301 T---------------------PVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVE 358 (381)
T ss_pred C---------------------cEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHH
Confidence 4 889999998888884 3 78888888999999999999987 33444333344444
Q ss_pred hhcCHHHHHHHHHHHHHH
Q 004411 523 SSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 523 ~~~~~~~W~~~~l~~l~~ 540 (755)
..+++..-++.+.+-+..
T Consensus 359 ~~~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 359 EEFSWERIAEQLLELYEE 376 (381)
T ss_pred HhcCHHHHHHHHHHHHHH
Confidence 466766666655554444
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.7e-10 Score=124.10 Aligned_cols=268 Identities=11% Similarity=0.101 Sum_probs=159.3
Q ss_pred HHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHH
Q 004411 178 VFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDY 257 (755)
Q Consensus 178 ~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~ 257 (755)
.-..++++..+| |+|+.| +....++.+.+....++|+....+-..+.. ..+ .-.+|.+...+...
T Consensus 94 ~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~~---------~~~---~~~ad~i~~~s~~~ 158 (380)
T PRK13609 94 KRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLHK---------IWV---HREVDRYFVATDHV 158 (380)
T ss_pred HHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCCc---------ccc---cCCCCEEEECCHHH
Confidence 334456666677 888885 555667766666555677653332111110 001 12578888777655
Q ss_pred HHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcc-cccccccCchhHHHHHHHHHHc---CCce-EEEEe
Q 004411 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMG-QFESIMSLDVTGQKVKELKEKF---DGKI-VILGV 332 (755)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~-~f~~~~~~~~~~~~~~~lr~~~---~~~~-vil~V 332 (755)
.+.+.+ .|++ ..+|.++ |++.. .|.... + ...+++++ ++++ +++..
T Consensus 159 ~~~l~~-----~gi~---------------~~ki~v~--G~p~~~~f~~~~---~----~~~~~~~~~l~~~~~~il~~~ 209 (380)
T PRK13609 159 KKVLVD-----IGVP---------------PEQVVET--GIPIRSSFELKI---N----PDIIYNKYQLCPNKKILLIMA 209 (380)
T ss_pred HHHHHH-----cCCC---------------hhHEEEE--CcccChHHcCcC---C----HHHHHHHcCCCCCCcEEEEEc
Confidence 444432 1321 1233333 44332 233211 1 12345555 2444 55667
Q ss_pred ccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCC
Q 004411 333 DDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS 412 (755)
Q Consensus 333 dRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~ 412 (755)
|++...||+..+++++.+ .|+++ ++++++. ++ .+++++++++++. + ..|+++ +.+
T Consensus 210 G~~~~~k~~~~li~~l~~----~~~~~----~viv~G~---~~----~~~~~l~~~~~~~----~----~~v~~~-g~~- 264 (380)
T PRK13609 210 GAHGVLGNVKELCQSLMS----VPDLQ----VVVVCGK---NE----ALKQSLEDLQETN----P----DALKVF-GYV- 264 (380)
T ss_pred CCCCCCcCHHHHHHHHhh----CCCcE----EEEEeCC---CH----HHHHHHHHHHhcC----C----CcEEEE-ech-
Confidence 899989999988888642 35554 6666532 11 2334555554332 1 147766 454
Q ss_pred hhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeC-CCCcc----ccc-CCcE
Q 004411 413 TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE-FIGCS----PSL-SGAI 486 (755)
Q Consensus 413 ~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~----~~l-~~ai 486 (755)
+++..+|+.||+++. ++.|++++|||+||. |+|++. ..|.. ..+ ..|.
T Consensus 265 -~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~---------------------PvI~~~~~~g~~~~n~~~~~~~G~ 318 (380)
T PRK13609 265 -ENIDELFRVTSCMIT----KPGGITLSEAAALGV---------------------PVILYKPVPGQEKENAMYFERKGA 318 (380)
T ss_pred -hhHHHHHHhccEEEe----CCCchHHHHHHHhCC---------------------CEEECCCCCCcchHHHHHHHhCCc
Confidence 468899999999874 445899999999975 777765 44421 122 2355
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHH
Q 004411 487 RVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 487 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (755)
.+.+.|+++++++|.++++++ +.+..+.++.+++...+++...++.+++.+...
T Consensus 319 ~~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 319 AVVIRDDEEVFAKTEALLQDD-MKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred EEEECCHHHHHHHHHHHHCCH-HHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 555689999999999999864 345555556667777788888888887766543
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.2e-11 Score=125.97 Aligned_cols=70 Identities=21% Similarity=0.289 Sum_probs=60.9
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecC
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~ 660 (755)
+|++|+||||++ .+..++++++++|++|.+. |..++++|||++..+.+.+..+. +.++|+.||+.+...+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~ 71 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKLREK-GIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQ 71 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCC
Confidence 689999999998 4567889999999999974 99999999999999999887763 3479999999998763
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.5e-11 Score=122.82 Aligned_cols=71 Identities=18% Similarity=0.136 Sum_probs=61.2
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEec
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~ 659 (755)
.|+|++|+||||++ .++.++++++++|++|.+ .|+.|+|+|||+...+.+.+..++ +.++|++||+++...
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITD---KDRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEc
Confidence 68999999999998 456688999999999996 599999999999999888776552 246899999999875
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.8e-11 Score=126.69 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=62.9
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC--CceEEcCCceEEEecC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE--KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~--~l~liaenGa~i~~~~ 660 (755)
.+++|++|+||||++ .++.++++++++|++|.+ .|..|+++|||++..+..++..+. ..++|++||+.|+.+.
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~ 80 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDE 80 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecC
Confidence 479999999999998 355678999999999996 599999999999999999987663 2469999999998753
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.7e-10 Score=127.14 Aligned_cols=256 Identities=13% Similarity=0.078 Sum_probs=157.4
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~F 261 (755)
++++..+| |+|+.|+....+.+. +..+..+.|+.++.|..+|.. .+.++ .-.+|.+...+.+- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~--~~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLL--ARFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHH--HHHhchheECchhh---h
Confidence 34444455 999999865544444 334455788887766545420 01111 11345443333210 0
Q ss_pred HHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccccccCC
Q 004411 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKG 340 (755)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KG 340 (755)
. . ....++.++|+|||.+.+.+. .. ..++ .. .+.++|+.+++....|+
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~ 197 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILALA----AP---PARL--AGREGKPTLLVVGGSQGARV 197 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhccc----ch---hhhc--cCCCCCeEEEEECCcHhHHH
Confidence 0 0 112468889999998766431 10 0111 12 36788899999999999
Q ss_pred hHHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHH
Q 004411 341 ISLKF-LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (755)
Q Consensus 341 i~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~al 419 (755)
+..++ +|++++.+ .| .+++++|. ++. +++++.+ + . +. . |.+. +.+ +++..+
T Consensus 198 ~~~~l~~a~~~~~~-~~-----~~~~~~G~-----g~~-~~~~~~~----~-~----~~---~-v~~~-g~~--~~~~~~ 249 (357)
T PRK00726 198 LNEAVPEALALLPE-AL-----QVIHQTGK-----GDL-EEVRAAY----A-A----GI---N-AEVV-PFI--DDMAAA 249 (357)
T ss_pred HHHHHHHHHHHhhh-Cc-----EEEEEcCC-----CcH-HHHHHHh----h-c----CC---c-EEEe-ehH--hhHHHH
Confidence 87776 88887743 22 23556663 221 2222221 1 1 21 1 5544 444 689999
Q ss_pred HHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCc--------cccc---CCcEEe
Q 004411 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC--------SPSL---SGAIRV 488 (755)
Q Consensus 420 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~l---~~ai~V 488 (755)
|..||+++.+| | +.+.+|||+||. |+|++...|. ++.+ ..|+++
T Consensus 250 ~~~~d~~i~~~---g-~~~~~Ea~~~g~---------------------Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~ 304 (357)
T PRK00726 250 YAAADLVICRA---G-ASTVAELAAAGL---------------------PAILVPLPHAADDHQTANARALVDAGAALLI 304 (357)
T ss_pred HHhCCEEEECC---C-HHHHHHHHHhCC---------------------CEEEecCCCCCcCcHHHHHHHHHHCCCEEEE
Confidence 99999999877 3 578999999975 6676654321 2334 247889
Q ss_pred CCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHH
Q 004411 489 NPWN--VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 489 nP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (755)
+|.| +++++++|.+++.+ ++.++...+..+++..+.+...-++.+++.+
T Consensus 305 ~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 305 PQSDLTPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred EcccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 9888 99999999999997 4466666667788887787777777776554
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.26 E-value=8.2e-11 Score=121.98 Aligned_cols=157 Identities=20% Similarity=0.247 Sum_probs=101.8
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecCCCce-e
Q 004411 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNSAW-E 665 (755)
Q Consensus 588 I~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~~~~w-~ 665 (755)
||+|+||||++ .+..++++++++|++|.+ .|+.++++|||++..+.+++..++ ..++|++||+.+....+... .
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 456699999999999997 499999999999999999998663 25899999999944322222 2
Q ss_pred EcccCcCccHHHHHHHHHHHHhcC--------CCCcEEeecc-----------eEEEEEec--cC--CCC-------cch
Q 004411 666 ICSLTRDFDWKEIAEPVMKLYTET--------TDGSFIEDKE-----------TAIVWHHQ--HA--DPH-------FGS 715 (755)
Q Consensus 666 ~~~~~~~~~w~~~v~~i~~~y~~~--------t~gs~iE~k~-----------~~l~~hyr--~a--d~~-------~~~ 715 (755)
. ..+ .+.+..+++..... ..+.|+.... ......+. .. ..+ ...
T Consensus 77 ~---~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 K---PID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp E---SB----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred h---hee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 2 223 34444555443321 1222222220 00000000 00 000 113
Q ss_pred hhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 716 CQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 716 ~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
.+..++.++|.+.+.+....+.++..++||.|+++|||+
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ 189 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGS 189 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHH
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHH
Confidence 456677888888776643556689999999999999984
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.24 E-value=2e-10 Score=115.93 Aligned_cols=111 Identities=20% Similarity=0.227 Sum_probs=82.3
Q ss_pred EeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCC
Q 004411 331 GVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410 (755)
Q Consensus 331 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~ 410 (755)
++||+.+.||+..+++|+..+.+++|+++ ++++|... +....+ .+... .+. ...|.+++ .
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~----~~~~~----~~~--~~~v~~~~-~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLE----ELLAA----LLL--LDRVIFLG-G 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHH----HHHHh----cCC--cccEEEeC-C
Confidence 89999999999999999999988887765 88887432 111111 11111 111 12477665 4
Q ss_pred C-ChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004411 411 L-STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (755)
Q Consensus 411 v-~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (755)
+ +.+++..+++.||+++.||..||++...+|||+||. |+|+|+..+..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~---------------------pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGL---------------------PVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCC---------------------CEEEcCCCCcceEE
Confidence 4 556666777779999999999999999999999964 89999999887755
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.9e-10 Score=121.07 Aligned_cols=246 Identities=14% Similarity=0.151 Sum_probs=147.3
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~F 261 (755)
++++..+| |+|+.|..... ++..+..+..++|+.++.|..||. .. +.++ ...+|.|...+....+.
T Consensus 83 ~~i~~~~p--DvI~~~~~~~~-~~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~- 148 (350)
T cd03785 83 KILKKFKP--DVVVGFGGYVS-GPVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY- 148 (350)
T ss_pred HHHHhcCC--CEEEECCCCcc-hHHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc-
Confidence 44455565 89999876543 333343444467777655555542 10 1111 11257766655432211
Q ss_pred HHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEecccccc
Q 004411 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLF 338 (755)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~ 338 (755)
+ ...++.++|+|+|.+.+.+. + . ++++ +++++|+.+++....
T Consensus 149 ----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~~~ 193 (350)
T cd03785 149 ----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQGA 193 (350)
T ss_pred ----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcHhH
Confidence 0 12366788999998766431 0 0 2333 467788888887778
Q ss_pred CChHHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004411 339 KGISLKF-LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (755)
Q Consensus 339 KGi~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 417 (755)
|+...++ .|++.+. + ++ +.++.+++ .+ +.++++ +.+.+. +. .|++++ .+ +++.
T Consensus 194 ~~~~~~l~~a~~~l~-~-~~----~~~~~i~G----~g-~~~~l~----~~~~~~----~~----~v~~~g-~~--~~~~ 247 (350)
T cd03785 194 RAINEAVPEALAELL-R-KR----LQVIHQTG----KG-DLEEVK----KAYEEL----GV----NYEVFP-FI--DDMA 247 (350)
T ss_pred HHHHHHHHHHHHHhh-c-cC----eEEEEEcC----Cc-cHHHHH----HHHhcc----CC----CeEEee-hh--hhHH
Confidence 8877654 7777663 2 22 33333332 22 223333 333322 11 266554 33 7899
Q ss_pred HHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC----c----cccc---CCcE
Q 004411 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----C----SPSL---SGAI 486 (755)
Q Consensus 418 aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~----~~~l---~~ai 486 (755)
.+|+.||++|.+| | +.+++|||+||. |+|++...| + ++.+ ..|+
T Consensus 248 ~~l~~ad~~v~~s---g-~~t~~Eam~~G~---------------------Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~ 302 (350)
T cd03785 248 AAYAAADLVISRA---G-ASTVAELAALGL---------------------PAILIPLPYAADDHQTANARALVKAGAAV 302 (350)
T ss_pred HHHHhcCEEEECC---C-HhHHHHHHHhCC---------------------CEEEeecCCCCCCcHHHhHHHHHhCCCEE
Confidence 9999999999876 3 578999999975 677765443 1 2334 2489
Q ss_pred EeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHH
Q 004411 487 RVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVA 528 (755)
Q Consensus 487 ~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 528 (755)
+|+|. |.++++++|.+++.. ++.++...++.++++..+...
T Consensus 303 ~v~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~ 345 (350)
T cd03785 303 LIPQEELTPERLAAALLELLSD-PERLKAMAEAARSLARPDAAE 345 (350)
T ss_pred EEecCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCHHH
Confidence 99987 899999999999974 445566666677777655433
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.4e-10 Score=131.99 Aligned_cols=73 Identities=18% Similarity=0.177 Sum_probs=61.3
Q ss_pred cCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC---Cc-------eEEcCC
Q 004411 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE---KL-------GLSAEH 652 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~---~l-------~liaen 652 (755)
.+.|+|++|+||||++ .++.++++++++|++|.+ .|+.|+|+|||++..+.+.+..+. .. ++|+.|
T Consensus 306 ~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~N 381 (580)
T PLN02887 306 PKFSYIFCDMDGTLLN---SKSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQ 381 (580)
T ss_pred cCccEEEEeCCCCCCC---CCCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeec
Confidence 4789999999999998 467799999999999997 599999999999999988887542 11 355679
Q ss_pred ceEEEec
Q 004411 653 GYFTRWS 659 (755)
Q Consensus 653 Ga~i~~~ 659 (755)
|+.|+..
T Consensus 382 GA~I~d~ 388 (580)
T PLN02887 382 GLLVYGR 388 (580)
T ss_pred CeEEEEC
Confidence 9999864
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.2e-10 Score=119.22 Aligned_cols=72 Identities=18% Similarity=0.180 Sum_probs=62.6
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~ 660 (755)
+|+|++|+||||++ .++.+++++.++|++|++ +++.|+++|||++..+++.+..++ +.++|++||+++...+
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNK 73 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCC
Confidence 47999999999998 456788999999999986 699999999999999999887663 2469999999999864
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.9e-10 Score=120.46 Aligned_cols=71 Identities=24% Similarity=0.302 Sum_probs=62.0
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEec
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~ 659 (755)
+|+|++|+||||++ .++.++++++++|++|.+ +|+.|+++|||++..+.+.+..+. +.++|+.||+.++..
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~ 74 (272)
T PRK10530 3 YRVIALDLDGTLLT---PKKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDY 74 (272)
T ss_pred ccEEEEeCCCceEC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEec
Confidence 68999999999998 456788999999999997 599999999999999998887763 346999999999864
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.2e-09 Score=120.99 Aligned_cols=251 Identities=15% Similarity=0.151 Sum_probs=146.7
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCCccchH-HHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhh--hCCEEEEe
Q 004411 177 KVFADKVMEVINPDEDYVWIHDYHLMVL-PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL--NSDLIGFH 253 (755)
Q Consensus 177 ~~fa~~i~~~~~~~~DiVwvhDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll--~~Dligf~ 253 (755)
..+++.+ +..+| |+|++|......+ ...+.+ ..++|+++..+-. -+.+.+. |+.+++.+.+. .+|++.-.
T Consensus 76 ~~l~~~l-~~~~p--Div~~~gd~~~~la~a~aa~-~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~ 148 (365)
T TIGR00236 76 EGLEELL-LEEKP--DIVLVQGDTTTTLAGALAAF-YLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAP 148 (365)
T ss_pred HHHHHHH-HHcCC--CEEEEeCCchHHHHHHHHHH-HhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCC
Confidence 3454444 34466 9999996544433 344433 3467886542211 1111111 12233323221 25776667
Q ss_pred CHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcC-CceEEEE-
Q 004411 254 TFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFD-GKIVILG- 331 (755)
Q Consensus 254 t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~- 331 (755)
+....+++++ +|.+ ..+|.++++|+....+..... .....++++++ ++.+++.
T Consensus 149 s~~~~~~l~~-----~G~~---------------~~~I~vign~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~vl~~ 203 (365)
T TIGR00236 149 TEQAKDNLLR-----ENVK---------------ADSIFVTGNTVIDALLTNVEI-----AYSSPVLSEFGEDKRYILLT 203 (365)
T ss_pred CHHHHHHHHH-----cCCC---------------cccEEEeCChHHHHHHHHHhh-----ccchhHHHhcCCCCCEEEEe
Confidence 7776666653 2322 346788899963222221100 01133455553 3344444
Q ss_pred ecccc-ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCC
Q 004411 332 VDDMD-LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410 (755)
Q Consensus 332 VdRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~ 410 (755)
..|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.++ . ...|.++ +.
T Consensus 204 ~hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~~----~--~~~v~~~-~~ 262 (365)
T TIGR00236 204 LHRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHLG----D--SKRVHLI-EP 262 (365)
T ss_pred cCchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHhC----C--CCCEEEE-CC
Confidence 44653 45999999999999988888765 65554332 11 1122 222221 1 1146655 57
Q ss_pred CChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe-CCCCcccccC-C-cEE
Q 004411 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EFIGCSPSLS-G-AIR 487 (755)
Q Consensus 411 v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l~-~-ai~ 487 (755)
++..++..+|+.||+++.+| |.+..|||+||. |+|.+ ..+|..+.+. + +++
T Consensus 263 ~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~---------------------PvI~~~~~~~~~e~~~~g~~~l 316 (365)
T TIGR00236 263 LEYLDFLNLAANSHLILTDS-----GGVQEEAPSLGK---------------------PVLVLRDTTERPETVEAGTNKL 316 (365)
T ss_pred CChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCC---------------------CEEECCCCCCChHHHhcCceEE
Confidence 88999999999999999888 445799999975 66764 5556555553 3 556
Q ss_pred eCCCCHHHHHHHHHHHhcCC
Q 004411 488 VNPWNVDAVADAMDSALQME 507 (755)
Q Consensus 488 VnP~d~~~~A~ai~~aL~m~ 507 (755)
+ |.|+++++++|.++++.+
T Consensus 317 v-~~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 317 V-GTDKENITKAAKRLLTDP 335 (365)
T ss_pred e-CCCHHHHHHHHHHHHhCh
Confidence 6 579999999999999864
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-10 Score=119.95 Aligned_cols=69 Identities=14% Similarity=0.145 Sum_probs=58.0
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-C-ceEEcCCceEEEec
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-K-LGLSAEHGYFTRWS 659 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~-l~liaenGa~i~~~ 659 (755)
+|++|+||||++. ++..+++++++|++|.+ ++..|+++|||+...++..+..+. + .++|++||+.|+..
T Consensus 1 ~i~~DlDGTLL~~---~~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~ 71 (221)
T TIGR02463 1 WVFSDLDGTLLDS---HSYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLE 71 (221)
T ss_pred CEEEeCCCCCcCC---CCCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcC
Confidence 5899999999983 34455569999999986 589999999999999999988763 2 46999999999875
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.8e-10 Score=118.43 Aligned_cols=69 Identities=17% Similarity=0.157 Sum_probs=59.6
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecC
Q 004411 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 588 I~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~ 660 (755)
|++|+||||++ .+..+++++.++|++|.+ .|+.++++|||++..+.+++..++ ..++|++||++++..+
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~ 70 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNE 70 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCC
Confidence 68999999998 456688999999999996 599999999999999888877664 4579999999998764
|
catalyze the same reaction as SPP. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.16 E-value=3e-10 Score=118.06 Aligned_cols=152 Identities=17% Similarity=0.213 Sum_probs=93.2
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-C--ceEEcCCceEEEecCC--
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-K--LGLSAEHGYFTRWSKN-- 661 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~--l~liaenGa~i~~~~~-- 661 (755)
||++||||||++ .+...++.. ++++ +. ++++.++++|||++..+.+++..++ . ..+|++||+.|+....
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~~-~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~ 74 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-GS-GDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ 74 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-hc-CCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC
Confidence 689999999998 344455544 7776 44 4688999999999999999997662 1 2389999999876531
Q ss_pred --CceeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecce--EEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeE-E
Q 004411 662 --SAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKET--AIVWHHQHADPHFGSCQAKELLDHLENVLANEPVV-V 736 (755)
Q Consensus 662 --~~w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~--~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~-V 736 (755)
..|.. .....|. ...+ ..+....+|..++.+.. ...++++.. ++.. ....++.+.+.+. ...+. +
T Consensus 75 ~~~~~~~---~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~--~~~~~~~ 144 (236)
T TIGR02471 75 PDRFWQK---HIDHDWR--RQAV-VEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQ--SQAAKVI 144 (236)
T ss_pred CChhHHH---HHhcCCC--HHHH-HHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhc--cCCEEEE
Confidence 11210 0111221 1122 23334566777766552 345566543 2211 1233444455443 22333 4
Q ss_pred EecCeEEEEEeCCCCCCC
Q 004411 737 KRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 737 ~sG~~~VEV~p~gvnKG~ 754 (755)
.++..++|+.|+++|||.
T Consensus 145 ~~~~~~~ei~~~~~~K~~ 162 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGL 162 (236)
T ss_pred EECCceEEEeeCCCChHH
Confidence 577789999999999984
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.6e-09 Score=118.47 Aligned_cols=180 Identities=14% Similarity=0.113 Sum_probs=116.3
Q ss_pred EEEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccccccCChHHH-HHHHHHHHHhCCCCCCcEEEEEEec
Q 004411 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISLK-FLAMGQLLEQHPDLRGKVVLVQITN 369 (755)
Q Consensus 292 ~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~-l~A~~~ll~~~P~~~~~vvLvqi~~ 369 (755)
.++|+|+|...+.+. . . ..++ .+ +++++|+++||....|++... +.|++++.+. +++ ++.+++
T Consensus 153 ~~i~n~v~~~~~~~~---~-~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---V-P---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc---c-h---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC
Confidence 578999997655321 0 0 1111 12 467889999998888987664 4788777542 222 333442
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCC
Q 004411 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGS 449 (755)
Q Consensus 370 p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~ 449 (755)
+++. + ++++.+.+.+. ..++.+. ..++..+|+.||++|.+| | +.+.+|||+||.
T Consensus 218 ----~~~~-~----~l~~~~~~~~l-------~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~-- 271 (348)
T TIGR01133 218 ----KNDL-E----KVKNVYQELGI-------EAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAAGV-- 271 (348)
T ss_pred ----cchH-H----HHHHHHhhCCc-------eEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHcCC--
Confidence 2221 2 33444433221 1233232 238899999999999865 4 689999999975
Q ss_pred CccccccCCCCCCCCCCCceEEEeCCCCc-------cccc---CCcEEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHH
Q 004411 450 PVLDRALGVDEKNPPQKKSVIIVSEFIGC-------SPSL---SGAIRVNPWN--VDAVADAMDSALQMENQEKILRHEK 517 (755)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~-------~~~l---~~ai~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~ 517 (755)
|+|++.+.|. ++.+ ..|++++|.| +++++++|.++++. ++.++.+.+.
T Consensus 272 -------------------Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~ 331 (348)
T TIGR01133 272 -------------------PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEA 331 (348)
T ss_pred -------------------CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence 7787776542 2334 2489999876 99999999999975 4556666777
Q ss_pred HhhHhhhcCHHHHHH
Q 004411 518 HYKYISSHDVAYWAK 532 (755)
Q Consensus 518 ~~~~v~~~~~~~W~~ 532 (755)
+++++..+...++++
T Consensus 332 ~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 332 ARKLAKPDAAKRIAE 346 (348)
T ss_pred HHhcCCccHHHHHHh
Confidence 888887776666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=7.2e-09 Score=115.95 Aligned_cols=270 Identities=10% Similarity=0.088 Sum_probs=155.6
Q ss_pred HHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHH
Q 004411 181 DKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARH 260 (755)
Q Consensus 181 ~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~ 260 (755)
.++++..+| |+|.++ +....+..+.+++..++|+.. .++-+-.... | + --.+|.+-..+....+.
T Consensus 97 ~~~l~~~kP--DvVi~~-~p~~~~~~l~~~~~~~iP~~~-v~td~~~~~~-----w----~--~~~~d~~~v~s~~~~~~ 161 (391)
T PRK13608 97 INLLIKEKP--DLILLT-FPTPVMSVLTEQFNINIPVAT-VMTDYRLHKN-----W----I--TPYSTRYYVATKETKQD 161 (391)
T ss_pred HHHHHHhCc--CEEEEC-CcHHHHHHHHHhcCCCCCEEE-EeCCCCcccc-----c----c--cCCCCEEEECCHHHHHH
Confidence 344555677 888875 222233333333344677643 3433311000 0 0 12478877777655444
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCc-eEEEEecccc
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGK-IVILGVDDMD 336 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~-~vil~VdRld 336 (755)
+.+ .|++ ..+|.++++.|+. .|..... ..++++++ +++ .+++++||+.
T Consensus 162 l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~~~-------~~~~~~~~~l~~~~~~ilv~~G~lg 213 (391)
T PRK13608 162 FID-----VGID---------------PSTVKVTGIPIDN-KFETPID-------QKQWLIDNNLDPDKQTILMSAGAFG 213 (391)
T ss_pred HHH-----cCCC---------------HHHEEEECeecCh-Hhccccc-------HHHHHHHcCCCCCCCEEEEECCCcc
Confidence 432 1321 1244445555553 3432111 12344454 244 4567799999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhH
Q 004411 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (755)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el 416 (755)
..||+..+++++ ++..|+++ ++++++. ++ ++.+++.+. .+.. ..|+++ |.+ +++
T Consensus 214 ~~k~~~~li~~~---~~~~~~~~----~vvv~G~----~~---~l~~~l~~~---~~~~------~~v~~~-G~~--~~~ 267 (391)
T PRK13608 214 VSKGFDTMITDI---LAKSANAQ----VVMICGK----SK---ELKRSLTAK---FKSN------ENVLIL-GYT--KHM 267 (391)
T ss_pred cchhHHHHHHHH---HhcCCCce----EEEEcCC----CH---HHHHHHHHH---hccC------CCeEEE-ecc--chH
Confidence 999999999885 34456554 6555532 22 122333322 2211 136554 444 579
Q ss_pred HHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc-----c-CCcEEeCC
Q 004411 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS-----L-SGAIRVNP 490 (755)
Q Consensus 417 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-----l-~~ai~VnP 490 (755)
..+|+.||+++.. +.|++..|||+||. |+|++...+..+. + ..|.-+-+
T Consensus 268 ~~~~~~aDl~I~k----~gg~tl~EA~a~G~---------------------PvI~~~~~pgqe~~N~~~~~~~G~g~~~ 322 (391)
T PRK13608 268 NEWMASSQLMITK----PGGITISEGLARCI---------------------PMIFLNPAPGQELENALYFEEKGFGKIA 322 (391)
T ss_pred HHHHHhhhEEEeC----CchHHHHHHHHhCC---------------------CEEECCCCCCcchhHHHHHHhCCcEEEe
Confidence 9999999999863 45889999999975 6777653322221 1 22333335
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHHHHhc
Q 004411 491 WNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDH 545 (755)
Q Consensus 491 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 545 (755)
.|.++++++|.++++++ +.+..+.++.+++...++...-++.+++.+...++.+
T Consensus 323 ~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 323 DTPEEAIKIVASLTNGN-EQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CCHHHHHHHHHHHhcCH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 69999999999999864 4556666677888888888888888887776655443
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.8e-09 Score=115.58 Aligned_cols=251 Identities=14% Similarity=0.070 Sum_probs=141.9
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCCh--HHHHHHhhhCCEEEEeC
Q 004411 177 KVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR--DEILKSLLNSDLIGFHT 254 (755)
Q Consensus 177 ~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~--~~il~~ll~~Dligf~t 254 (755)
..+.+.+.+. +| |+|++|++....++..+..+..++|+.++.|--. +.+ +..|+. +..+. -.+|.+-.-+
T Consensus 78 ~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~-s~~--~~~~~~~~r~~~~--~~ad~~~~~s 149 (363)
T cd03786 78 IGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLR-SFD--RGMPDEENRHAID--KLSDLHFAPT 149 (363)
T ss_pred HHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccc-cCC--CCCCchHHHHHHH--HHhhhccCCC
Confidence 3444445444 66 8999998776655554444445788876554211 000 011211 11111 1346555445
Q ss_pred HHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccC-CcccccccccCchhHHHHHHHHHHc---CCceEEE
Q 004411 255 FDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGI-HMGQFESIMSLDVTGQKVKELKEKF---DGKIVIL 330 (755)
Q Consensus 255 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GI-d~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil 330 (755)
....+++.+ .| ....+|.++++++ |...+..... . ....++.+ .++.+++
T Consensus 150 ~~~~~~l~~-----~G---------------~~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~~~vlv 203 (363)
T cd03786 150 EEARRNLLQ-----EG---------------EPPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPKKYILV 203 (363)
T ss_pred HHHHHHHHH-----cC---------------CCcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCCCEEEE
Confidence 444444332 12 1234677788775 5443322110 0 01112223 2455777
Q ss_pred Eeccccc---cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEe
Q 004411 331 GVDDMDL---FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVII 407 (755)
Q Consensus 331 ~VdRld~---~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~ 407 (755)
.++|+.. .||+..+++|++++.+. ++.++..+. ++..+ ++++.+.+.+.. . ..|.++
T Consensus 204 ~~~r~~~~~~~k~~~~l~~al~~l~~~------~~~vi~~~~-----~~~~~----~l~~~~~~~~~~--~---~~v~~~ 263 (363)
T cd03786 204 TLHRVENVDDGEQLEEILEALAELAEE------DVPVVFPNH-----PRTRP----RIREAGLEFLGH--H---PNVLLI 263 (363)
T ss_pred EeCCccccCChHHHHHHHHHHHHHHhc------CCEEEEECC-----CChHH----HHHHHHHhhccC--C---CCEEEE
Confidence 8999875 79999999999987432 233443332 22222 334444433220 0 136655
Q ss_pred cCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-CCcE
Q 004411 408 KEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAI 486 (755)
Q Consensus 408 ~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai 486 (755)
+....+++..+|+.||++|.+|- | +..|+++||. |+|++...+..+.+ .+|+
T Consensus 264 -~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~---------------------PvI~~~~~~~~~~~~~~g~ 316 (363)
T cd03786 264 -SPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV---------------------PVLNLRDRTERPETVESGT 316 (363)
T ss_pred -CCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC---------------------CEEeeCCCCccchhhheee
Confidence 45678899999999999999994 4 4689999965 67777655544444 4555
Q ss_pred EeCC-CCHHHHHHHHHHHhcCCH
Q 004411 487 RVNP-WNVDAVADAMDSALQMEN 508 (755)
Q Consensus 487 ~VnP-~d~~~~A~ai~~aL~m~~ 508 (755)
.+.+ .|+++++++|.++++.+.
T Consensus 317 ~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 317 NVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEecCCCHHHHHHHHHHHhcCch
Confidence 4443 379999999999998764
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.6e-10 Score=117.50 Aligned_cols=71 Identities=14% Similarity=0.094 Sum_probs=58.1
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecCC
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKN 661 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~~ 661 (755)
+|++|+||||++. .....+.++++|++|.+ .|..|+++|||+...+.+++..++ ..++|++||++++..++
T Consensus 1 li~~DlDGTll~~---~~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDP---HGYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCC---CCcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCC
Confidence 6899999999983 33233468999999986 489999999999999999888763 24799999999987643
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.12 E-value=3e-10 Score=127.18 Aligned_cols=162 Identities=14% Similarity=0.171 Sum_probs=98.1
Q ss_pred hhccCceEEEecCCCcCCCCCCCCCCCC-HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhh---hcCC-CCceEEcCCce
Q 004411 580 YNKTNSRLILLDYDGTVMPQTSEDKRPS-TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW---FSGV-EKLGLSAEHGY 654 (755)
Q Consensus 580 y~~s~~rlI~lD~DGTL~~~~~~~~~p~-~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~---f~~i-~~l~liaenGa 654 (755)
+..+.+.+|++|+||||++.. .++..+ .++..+++++.+ ++..++++|||+.....+. |... |+ .+|+.||+
T Consensus 4 ~~~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~p~-~~I~~nGt 80 (413)
T PLN02382 4 LSGSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLTPD-ITIMSVGT 80 (413)
T ss_pred ccCCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCCCC-EEEEcCCc
Confidence 345678899999999999843 233455 444555588775 5888999999996655554 4322 44 36677999
Q ss_pred EEEecCC----CceeEcccCcCccHH-HHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHh
Q 004411 655 FTRWSKN----SAWEICSLTRDFDWK-EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVL 729 (755)
Q Consensus 655 ~i~~~~~----~~w~~~~~~~~~~w~-~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l 729 (755)
.|...+. ..|... .+..|. ..+.+.+..|.........+++...+.+++.+. .+.++...+.+.+
T Consensus 81 ~I~~~~~~~~d~~w~~~---l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~~~ 150 (413)
T PLN02382 81 EIAYGESMVPDHGWVEY---LNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSERL 150 (413)
T ss_pred EEEeCCCCccChhHHHH---HhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHHHH
Confidence 9986431 123221 223443 223344444432233344555666777765432 2234455555555
Q ss_pred cC--CCeE-EEecCeEEEEEeCCCCCCC
Q 004411 730 AN--EPVV-VKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 730 ~~--~~~~-V~sG~~~VEV~p~gvnKG~ 754 (755)
.. ..+. +.+|..++||.|+++|||.
T Consensus 151 ~~~g~~~~i~~s~~~~ldI~p~g~sKg~ 178 (413)
T PLN02382 151 EKRGLDVKIIYSGGIDLDVLPQGAGKGQ 178 (413)
T ss_pred HhcCCcEEEEEECCcEEEEEeCCCCHHH
Confidence 32 2344 3588999999999999984
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.2e-08 Score=115.48 Aligned_cols=182 Identities=10% Similarity=0.117 Sum_probs=120.1
Q ss_pred CCceEEEEeccccccCChHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004411 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLE--QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~ 401 (755)
++..+|..|.|+...||..+++.+++++++ ++|+. .+.+|..|.....+. .-.++.+.+.+++++ -.|. +
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~-~gk~~i~~i~~la~~--~~~~--~- 458 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADG-EGKEIIQRIVEFSKR--PEFR--G- 458 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccc-hHHHHHHHHHHHHhc--ccCC--C-
Confidence 356689999999999999999999999985 55652 366777775432221 123455666666542 0122 1
Q ss_pred ccEEEecCCCChhhHHHHHHhCcEEEE-cCC-CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcc
Q 004411 402 EPIVIIKEPLSTQDKVPYYAIAECCVV-NCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479 (755)
Q Consensus 402 ~pV~~~~~~v~~~el~aly~~ADv~vv-tS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 479 (755)
.|+|+. ..+..--..+|..||++++ ||. .|.-|+.-+-||.- |.|..|-.-|..
T Consensus 459 -kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n----------------------GgL~~sv~DG~~ 514 (601)
T TIGR02094 459 -RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN----------------------GVLNLSILDGWW 514 (601)
T ss_pred -CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc----------------------CCceeecccCcc
Confidence 477765 4455556679999999999 777 89999988877774 456666666654
Q ss_pred ccc---CCcEEeCC------------CCHHHHHHHHHHHh-c----CCH----HHHHHHHHH-HhhHhhhcCHHHHHHHH
Q 004411 480 PSL---SGAIRVNP------------WNVDAVADAMDSAL-Q----MEN----QEKILRHEK-HYKYISSHDVAYWAKSI 534 (755)
Q Consensus 480 ~~l---~~ai~VnP------------~d~~~~A~ai~~aL-~----m~~----~er~~r~~~-~~~~v~~~~~~~W~~~~ 534 (755)
.+. .+|+.+.+ .|.+++-++|.+++ . .+. .+...++++ |..-...+++.+-++.|
T Consensus 515 ~E~~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y 594 (601)
T TIGR02094 515 GEGYDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREY 594 (601)
T ss_pred cccCCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHH
Confidence 443 25888885 89999999998877 2 211 122233322 22223357888888877
Q ss_pred HHH
Q 004411 535 DQD 537 (755)
Q Consensus 535 l~~ 537 (755)
.+.
T Consensus 595 ~~~ 597 (601)
T TIGR02094 595 VDK 597 (601)
T ss_pred HHH
Confidence 653
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-09 Score=114.48 Aligned_cols=71 Identities=17% Similarity=0.168 Sum_probs=61.3
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEec
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~ 659 (755)
.|+||+|+||||++. ....++.++++|++|.+ .++.|+++|||.+..+..++..+. +.++|++||+.|..+
T Consensus 1 ~KLIftDLDGTLLd~---~~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p 72 (302)
T PRK12702 1 MRLVLSSLDGSLLDL---EFNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVP 72 (302)
T ss_pred CcEEEEeCCCCCcCC---CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEc
Confidence 489999999999983 45567889999999997 599999999999999999887663 237999999999876
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.9e-09 Score=122.82 Aligned_cols=73 Identities=16% Similarity=0.144 Sum_probs=62.1
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~ 660 (755)
++|+||+|+||||++. +...+++++++|++|.+ .|+.|+++|||++..+..++..+. +.++|++||+.|+.+.
T Consensus 415 ~~KLIfsDLDGTLLd~---d~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~ 488 (694)
T PRK14502 415 FKKIVYTDLDGTLLNP---LTYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPK 488 (694)
T ss_pred eeeEEEEECcCCCcCC---CCccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECC
Confidence 6799999999999983 44566789999999996 589999999999999988887663 2469999999999864
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.5e-09 Score=113.73 Aligned_cols=72 Identities=14% Similarity=0.104 Sum_probs=61.2
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEec
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~ 659 (755)
.+|+|++|+||||++ .+..+++++.++|++|.+ .+..++|+|||+...+...+..+. ..++|++||++|+.+
T Consensus 3 ~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~ 75 (273)
T PRK00192 3 MKLLVFTDLDGTLLD---HHTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIP 75 (273)
T ss_pred cceEEEEcCcccCcC---CCCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEec
Confidence 478999999999998 345567889999999996 589999999999999988887663 246999999999875
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.6e-09 Score=100.36 Aligned_cols=128 Identities=19% Similarity=0.245 Sum_probs=90.0
Q ss_pred ceEEEEeccccccCChHHHHH-HHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004411 326 KIVILGVDDMDLFKGISLKFL-AMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (755)
Q Consensus 326 ~~vil~VdRld~~KGi~~~l~-A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV 404 (755)
..+|++.|++...||+..+++ |++++.+++|+++ |+++|.. ++ +++++ +. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~-----~~------~l~~~----~~-------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNG-----PD------ELKRL----RR-------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECES-----S-------HHCCH----HH-------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCC-----HH------HHHHh----cC-------CCE
Confidence 357899999999999999999 9999999999755 8877752 22 12222 11 137
Q ss_pred EEecCCCChhhHHHHHHhCcEEEEcCC-CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004411 405 VIIKEPLSTQDKVPYYAIAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (755)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (755)
.+.+ .+ +|+.++|+.||+++.|+. .+|++...+|||++|. |+|+|.. |+...+.
T Consensus 56 ~~~g-~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~---------------------pvi~~~~-~~~~~~~ 110 (135)
T PF13692_consen 56 RFHG-FV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGK---------------------PVIASDN-GAEGIVE 110 (135)
T ss_dssp EEE--S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT-----------------------EEEEHH-HCHCHS-
T ss_pred EEcC-CH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCC---------------------CEEECCc-chhhhee
Confidence 7654 55 689999999999999985 7899999999999975 8888888 6666552
Q ss_pred ---CcEEeCCCCHHHHHHHHHHHhc
Q 004411 484 ---GAIRVNPWNVDAVADAMDSALQ 505 (755)
Q Consensus 484 ---~ai~VnP~d~~~~A~ai~~aL~ 505 (755)
.++.+ +.|+++++++|.+++.
T Consensus 111 ~~~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 111 EDGCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp --SEEEE--TT-HHHHHHHHHHHHH
T ss_pred ecCCeEEE-CCCHHHHHHHHHHHhc
Confidence 36666 8899999999999885
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.3e-08 Score=107.06 Aligned_cols=149 Identities=16% Similarity=0.151 Sum_probs=95.5
Q ss_pred HHHHHcC---CceE-EEEe-ccccccC-ChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 004411 318 ELKEKFD---GKIV-ILGV-DDMDLFK-GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEE 391 (755)
Q Consensus 318 ~lr~~~~---~~~v-il~V-dRld~~K-Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~ 391 (755)
.++++++ ++++ ++.. +|....| ++..+++|++.+.+++|+++ +++++.+ ++.. +++++++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~~----~~~~----~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLVN----PKRR----EQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCC----hhhH----HHHHHHHhh
Confidence 3455552 4444 3333 4766654 47889999999988888765 6666531 2222 233344332
Q ss_pred HhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEE
Q 004411 392 INLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471 (755)
Q Consensus 392 In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV 471 (755)
.. |. .+.++. .++..+|+.||+++++| |.+.+|+|+||. |+|
T Consensus 243 ~~---~~----~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~---------------------PvI 284 (380)
T PRK00025 243 YA---GL----EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV---------------------PMV 284 (380)
T ss_pred cC---CC----CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC---------------------CEE
Confidence 10 11 244442 47899999999999998 678889999975 666
Q ss_pred Ee-----------------CCCCcccccCC-----cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 004411 472 VS-----------------EFIGCSPSLSG-----AIRVNPWNVDAVADAMDSALQMENQEKILRHEK 517 (755)
Q Consensus 472 ~S-----------------e~~G~~~~l~~-----ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 517 (755)
++ .+.|..+.+.+ +++++..|++++++++.++|++++ .++.+.++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~ 351 (380)
T PRK00025 285 VGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA-RRQALLEG 351 (380)
T ss_pred EEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH-HHHHHHHH
Confidence 65 34444555532 367788899999999999998753 34433333
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.1e-07 Score=94.75 Aligned_cols=190 Identities=12% Similarity=0.157 Sum_probs=136.0
Q ss_pred CceEEEEeccccccCChHHHHHHHHHHHHhCCC--CCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004411 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPD--LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~--~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~ 402 (755)
....+|+++.+.|.|+.. .|+-+.-.+.++|. .-.++.|+++| ..|+. +-++..+.+++++.+++..-
T Consensus 268 r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRne--eD~ervk~Lkd~a~~L~i~~------ 337 (465)
T KOG1387|consen 268 RENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNE--EDEERVKSLKDLAEELKIPK------ 337 (465)
T ss_pred cceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCCh--hhHHHHHHHHHHHHhcCCcc------
Confidence 457899999999999999 77777788888887 33457787766 55543 33455567888888876541
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004411 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (755)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (755)
.|.| .-++|.+++..+|..|-+.|-+-..|-||+.+.||||+|.-. +.-.+| .|-.=|+.+..|-
T Consensus 338 ~v~F-~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIp--i~h~Sg--------GP~lDIV~~~~G~---- 402 (465)
T KOG1387|consen 338 HVQF-EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIP--IVHNSG--------GPLLDIVTPWDGE---- 402 (465)
T ss_pred ceEE-EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceE--EEeCCC--------CCceeeeeccCCc----
Confidence 3664 458999999999999999999999999999999999996410 000000 0011123232221
Q ss_pred CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHH
Q 004411 483 SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 483 ~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (755)
..|++. | +.++-|++|.+++.+..+||....+..|..+.++.-+...+.|...+...
T Consensus 403 ~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 403 TTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred cceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 136666 3 67889999999999999998887777888888777776666666555443
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.8e-08 Score=103.94 Aligned_cols=69 Identities=17% Similarity=0.231 Sum_probs=57.4
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecC
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~ 660 (755)
+|++|+||||++. +. .+++++++|++|.+ .|..++++|||+...+..++..+. +-++|++||+.|..+.
T Consensus 1 li~~DlDGTLl~~---~~-~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~ 70 (225)
T TIGR02461 1 VIFTDLDGTLLPP---GY-EPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPR 70 (225)
T ss_pred CEEEeCCCCCcCC---CC-CchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecC
Confidence 5899999999983 23 44679999999997 489999999999999998887653 2369999999998863
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.6e-07 Score=102.89 Aligned_cols=238 Identities=13% Similarity=0.058 Sum_probs=136.2
Q ss_pred HHHHhCCCCCEEEEeCCccch--HHH-HHHh-hcCCCeEEEEEecCCCchhhhhcCC-ChHHHHHHhhhCCEEEEeCHHH
Q 004411 183 VMEVINPDEDYVWIHDYHLMV--LPS-FLRK-RFHRVKVGFFLHSPFPSSEIYRTLP-VRDEILKSLLNSDLIGFHTFDY 257 (755)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~l--lp~-~lr~-~~~~~~i~~flH~PfP~~e~~r~lp-~~~~il~~ll~~Dligf~t~~~ 257 (755)
++..+++ +|+|++|..-... ++. ++++ +..++|+++++|--+|.. +.... ........+-.||.|..++...
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~ 134 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKM 134 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHH
Confidence 4444566 4999999754331 222 2222 112699999999877632 11111 1222334455689999998876
Q ss_pred HHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccc
Q 004411 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337 (755)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~ 337 (755)
.+.+.+ .|+. ..++.++|+..+...... +....+++.|+++||+..
T Consensus 135 ~~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k 180 (333)
T PRK09814 135 KDRLVE-----EGLT---------------TDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEK 180 (333)
T ss_pred HHHHHH-----cCCC---------------cCceEecccccccccccc--------------cccccCCceEEEecChhh
Confidence 655542 1221 112333443332211100 011234568999999994
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004411 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (755)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 417 (755)
..++. +..|+. .|+++|. |++.. . . ...|.|. |.++.+|+.
T Consensus 181 ~~~l~----------~~~~~~----~l~i~G~-----g~~~~-----------~---~-----~~~V~f~-G~~~~eel~ 221 (333)
T PRK09814 181 SPFLK----------NWSQGI----KLTVFGP-----NPEDL-----------E---N-----SANISYK-GWFDPEELP 221 (333)
T ss_pred chHHH----------hcCCCC----eEEEECC-----Ccccc-----------c---c-----CCCeEEe-cCCCHHHHH
Confidence 33211 124554 3777773 22211 0 0 0136655 689999999
Q ss_pred HHHHhCcEEEEcCCC-----------cCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---
Q 004411 418 PYYAIAECCVVNCVR-----------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--- 483 (755)
Q Consensus 418 aly~~ADv~vvtS~~-----------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--- 483 (755)
++|+. |+++++.-. -.++--..||||||. |+|++..++..+.+.
T Consensus 222 ~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~---------------------PVI~~~~~~~~~~V~~~~ 279 (333)
T PRK09814 222 NELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL---------------------PVIVWSKAAIADFIVENG 279 (333)
T ss_pred HHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC---------------------CEEECCCccHHHHHHhCC
Confidence 99988 666654311 123333677899975 899999999888883
Q ss_pred CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh
Q 004411 484 GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS 523 (755)
Q Consensus 484 ~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 523 (755)
.|+.|+ +.++++++|.+. ++++++++.++.++...
T Consensus 280 ~G~~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~ 314 (333)
T PRK09814 280 LGFVVD--SLEELPEIIDNI---TEEEYQEMVENVKKISK 314 (333)
T ss_pred ceEEeC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHH
Confidence 489998 688999998873 35555555555555443
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.5e-09 Score=113.64 Aligned_cols=156 Identities=17% Similarity=0.238 Sum_probs=91.6
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC----CCceEEcCCceEEEecC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV----EKLGLSAEHGYFTRWSK 660 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i----~~l~liaenGa~i~~~~ 660 (755)
++||++|+||||++. +....+++.+.++ ....++..++++|||+.+...+.+... | -.+|+++|+.|++..
T Consensus 2 ~~ll~sDlD~Tl~~~---~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~P-d~~I~svGt~I~~~~ 76 (247)
T PF05116_consen 2 PRLLASDLDGTLIDG---DDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQP-DYIITSVGTEIYYGE 76 (247)
T ss_dssp SEEEEEETBTTTBHC---HHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE--SEEEETTTTEEEESS
T ss_pred CEEEEEECCCCCcCC---CHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCC-CEEEecCCeEEEEcC
Confidence 689999999999921 1112345555555 233457778999999999988887643 3 248999999999842
Q ss_pred CCceeEcc---cCcCccHH-HHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCC--e
Q 004411 661 NSAWEICS---LTRDFDWK-EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEP--V 734 (755)
Q Consensus 661 ~~~w~~~~---~~~~~~w~-~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~--~ 734 (755)
.|.... ...+..|. +.+++++..+..-.+..-.++..+.++|.++..+.. ...+.|+..+.... +
T Consensus 77 --~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~-------~~~~~i~~~l~~~~l~~ 147 (247)
T PF05116_consen 77 --NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSA-------DILEEIRARLRQRGLRV 147 (247)
T ss_dssp --TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHC-------HHHHHHHHHHHCCTCEE
T ss_pred --CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccch-------hHHHHHHHHHHHcCCCe
Confidence 333210 02234563 566677766643222222334445677776643211 22344444443333 3
Q ss_pred EE-EecCeEEEEEeCCCCCCC
Q 004411 735 VV-KRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 735 ~V-~sG~~~VEV~p~gvnKG~ 754 (755)
.+ .++...++|.|+++|||.
T Consensus 148 ~~i~s~~~~ldilP~~a~K~~ 168 (247)
T PF05116_consen 148 NVIYSNGRDLDILPKGASKGA 168 (247)
T ss_dssp EEEECTCCEEEEEETT-SHHH
T ss_pred eEEEccceeEEEccCCCCHHH
Confidence 43 478899999999999984
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.5e-06 Score=96.98 Aligned_cols=303 Identities=18% Similarity=0.235 Sum_probs=147.3
Q ss_pred EEEEeCCccchHHHHHHhhcCCCeEEEEEecCCC-------chhhhhcCCC---hHH-----------HHHH-hhhCCEE
Q 004411 193 YVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP-------SSEIYRTLPV---RDE-----------ILKS-LLNSDLI 250 (755)
Q Consensus 193 iVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP-------~~e~~r~lp~---~~~-----------il~~-ll~~Dli 250 (755)
+.+.|.|..-+-.-++|++.|++.-+|+.|-.-+ ..++|..|+. .++ |-++ -..||..
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 5566887766666689999999999999996433 1233444441 111 1111 1223332
Q ss_pred EEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccC----chhHHHHHHH-HHHc--
Q 004411 251 GFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL----DVTGQKVKEL-KEKF-- 323 (755)
Q Consensus 251 gf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~----~~~~~~~~~l-r~~~-- 323 (755)
-.-+.--++ -|..+| +|..- .|.|||+|.+.|...-.- ...++++.++ +..+
T Consensus 226 TTVSeITa~----Ea~~LL----------------~r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g 284 (633)
T PF05693_consen 226 TTVSEITAK----EAEHLL----------------KRKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYG 284 (633)
T ss_dssp EESSHHHHH----HHHHHH----------------SS--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred eehhhhHHH----HHHHHh----------------CCCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 222111000 111122 22221 257999999987653110 1123334443 3333
Q ss_pred -----CCceEEEE-ecccc-ccCChHHHHHHHHHHHHh--CCCCCCcEEEEEEecCCCCCchh---------HHHHHHHH
Q 004411 324 -----DGKIVILG-VDDMD-LFKGISLKFLAMGQLLEQ--HPDLRGKVVLVQITNPARSSGKD---------VQDLLSDT 385 (755)
Q Consensus 324 -----~~~~vil~-VdRld-~~KGi~~~l~A~~~ll~~--~P~~~~~vvLvqi~~p~r~~~~~---------~~~l~~~i 385 (755)
.+++++++ .||.+ ..||++..|+|+.+|-.. .-.. +.-|+..|-.|+....-. +.++++.+
T Consensus 285 ~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~-~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~ 363 (633)
T PF05693_consen 285 HYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGS-DKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTV 363 (633)
T ss_dssp ---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT--S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCC-CCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHH
Confidence 14666666 59999 589999999999987431 1111 222333344465443111 12222222
Q ss_pred HHHHHHHhcc---------------------------------------------------------------cCCCCCc
Q 004411 386 NRIAEEINLN---------------------------------------------------------------FGKPGYE 402 (755)
Q Consensus 386 ~~lv~~In~~---------------------------------------------------------------~g~~~~~ 402 (755)
.++.++|..+ -...+-.
T Consensus 364 ~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drV 443 (633)
T PF05693_consen 364 DEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRV 443 (633)
T ss_dssp HHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SE
T ss_pred HHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCce
Confidence 2222222111 0011122
Q ss_pred cEEEecCCCC------hhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCC
Q 004411 403 PIVIIKEPLS------TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI 476 (755)
Q Consensus 403 pV~~~~~~v~------~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 476 (755)
.|+|....++ .-++..+.+.+|++|+||++|+.|.+|+|++|.+. |-|.|..+
T Consensus 444 KVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gV---------------------PsITTnLs 502 (633)
T PF05693_consen 444 KVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGV---------------------PSITTNLS 502 (633)
T ss_dssp EEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT-----------------------EEEETTB
T ss_pred EEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCC---------------------ceeeccch
Confidence 4665544443 23788899999999999999999999999999864 78999999
Q ss_pred Cccccc--------CCcEE-eCC--CCH----HHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHH
Q 004411 477 GCSPSL--------SGAIR-VNP--WNV----DAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (755)
Q Consensus 477 G~~~~l--------~~ai~-VnP--~d~----~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (755)
|...-+ ..|+. |+- .|. +++|+.|.....++..+|.....+..+.-..-+|.+-...|.+.-
T Consensus 503 GFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay 579 (633)
T PF05693_consen 503 GFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAY 579 (633)
T ss_dssp HHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHH
T ss_pred hHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 976433 12554 433 233 566667777788887776665444444334456666555555443
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=98.76 E-value=6.4e-07 Score=103.26 Aligned_cols=238 Identities=13% Similarity=0.090 Sum_probs=154.2
Q ss_pred CCCEEE--EeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCC--hHHHHHHhhhCCEEEEeCHHHHHHHHHHH
Q 004411 190 DEDYVW--IHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPV--RDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (755)
Q Consensus 190 ~~DiVw--vhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~--~~~il~~ll~~Dligf~t~~~~~~Fl~~~ 265 (755)
++|++. .+.-|... +....|.-++.+..|+ -+. |. -+..+..+-.+|.+..-|.+-.+....
T Consensus 224 ~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-------~~~~y~~~l~~~~~~d~iIv~T~~q~~~l~~-- 289 (519)
T TIGR03713 224 DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-------RHHTYLDLYESLSRADLIIVDREDIERLLEE-- 289 (519)
T ss_pred CCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-------cccchhhhhhChhhcCeEEEcCHHHHHHHHH--
Confidence 357777 56666655 3333444445556665 211 21 245566677778777666543333321
Q ss_pred hhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHH
Q 004411 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (755)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 345 (755)
++ +- .. ...+|..+|++.= +.... ..++..++.|.+++||| +.|-+...|
T Consensus 290 -~~-~~------------~~-~~~~v~~Ip~~~~--~~~~~------------~s~r~~~~~I~v~idrL-~ek~~~~~I 339 (519)
T TIGR03713 290 -NY-RE------------NY-VEFDISRITPFDT--RLRLG------------QSQQLYETEIGFWIDGL-SDEELQQIL 339 (519)
T ss_pred -Hh-hh------------cc-cCCcceeeCccce--EEecC------------hhhcccceEEEEEcCCC-ChHHHHHHH
Confidence 11 10 00 1234445676633 11110 11233567777778899 999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC-C------------------c---c
Q 004411 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG-Y------------------E---P 403 (755)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~-~------------------~---p 403 (755)
+|+.++++++|+.. |.+.|... . .++.+.++++++++|..++... + . .
T Consensus 340 ~av~~~~~~~p~~~----L~~~gy~~---~---~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (519)
T TIGR03713 340 QQLLQYILKNPDYE----LKILTYNN---D---NDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKE 409 (519)
T ss_pred HHHHHHHhhCCCeE----EEEEEecC---c---hhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhccccc
Confidence 99999999999977 77666431 1 2335566777777766532210 0 0 1
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (755)
.+.+.+..+..++.+.|.-|.++|.+|..|||+ ..+||++.|. |.| .-|.++.+.
T Consensus 410 ~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~Gi---------------------PqI---nyg~~~~V~ 464 (519)
T TIGR03713 410 RIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGI---------------------PQI---NKVETDYVE 464 (519)
T ss_pred EEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCC---------------------Cee---ecCCceeeE
Confidence 344556666779999999999999999999999 9999999864 555 667777773
Q ss_pred ---CcEEeCCCCHHHHHHHHHHHhcCCH
Q 004411 484 ---GAIRVNPWNVDAVADAMDSALQMEN 508 (755)
Q Consensus 484 ---~ai~VnP~d~~~~A~ai~~aL~m~~ 508 (755)
+|++| .|..++++||...|+.+.
T Consensus 465 d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 465 HNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred cCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 69999 699999999999999764
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.6e-06 Score=103.23 Aligned_cols=181 Identities=9% Similarity=0.050 Sum_probs=115.7
Q ss_pred eEEEEeccccccCChHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004411 327 IVILGVDDMDLFKGISLKFLAMGQLLE--QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (755)
Q Consensus 327 ~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV 404 (755)
.+|.++.|+..-||..+++..+++|.+ .+|+ ..+.+|..|.....+. .-+++.+.+.++++. -++. + .|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~-~gK~iIk~i~~~a~~--p~~~--~--kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADE-PGKELIQEIVEFSRR--PEFR--G--RI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccch-HHHHHHHHHHHHHhC--cCCC--C--cE
Confidence 478889999999999999999999865 3454 2477777664332221 123455555555541 0221 1 47
Q ss_pred EEecCCCChhhHHHHHHhCcEEEEcCC--CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004411 405 VIIKEPLSTQDKVPYYAIAECCVVNCV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (755)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (755)
+|+. ..+-.--..++..|||++.||. .|.-|+.-+-||.- |.|-+|..-|.-.+-
T Consensus 550 vfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N----------------------G~LnlSvlDGww~E~ 606 (778)
T cd04299 550 VFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN----------------------GGLNLSVLDGWWDEG 606 (778)
T ss_pred EEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc----------------------CCeeeecccCccccc
Confidence 8775 4555556679999999999999 77777766665553 578888887765444
Q ss_pred -C--CcEEeCC------------CCHHHHHHHHHHHhc----CC-----HHHHHHHHHH-HhhHhhhcCHHHHHHHHHHH
Q 004411 483 -S--GAIRVNP------------WNVDAVADAMDSALQ----ME-----NQEKILRHEK-HYKYISSHDVAYWAKSIDQD 537 (755)
Q Consensus 483 -~--~ai~VnP------------~d~~~~A~ai~~aL~----m~-----~~er~~r~~~-~~~~v~~~~~~~W~~~~l~~ 537 (755)
. +|..+.+ .|.+++-+.|.+.+- .. +.+...+++. +....-.+++.+-++.|++.
T Consensus 607 ~~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 607 YDGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred cCCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 2 5888888 555666666654433 10 1233333333 23333457888888888877
Q ss_pred HH
Q 004411 538 LE 539 (755)
Q Consensus 538 l~ 539 (755)
+-
T Consensus 687 ~Y 688 (778)
T cd04299 687 FY 688 (778)
T ss_pred hH
Confidence 65
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.7e-05 Score=88.65 Aligned_cols=134 Identities=17% Similarity=0.116 Sum_probs=83.6
Q ss_pred CceEEE--Eeccccc-cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004411 325 GKIVIL--GVDDMDL-FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (755)
Q Consensus 325 ~~~vil--~VdRld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~ 401 (755)
++++|+ +.+|..+ .|+++.+++|++.+.+++|+++ +++.+.+ +... ..++++.... +. +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~----~~~~----~~~~~~~~~~----~~-~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVN----FKRR----LQFEQIKAEY----GP-DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCC----chhH----HHHHHHHHHh----CC-CC
Confidence 555553 4469887 7999999999999999899876 5443322 1111 1223333322 21 11
Q ss_pred ccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe--------
Q 004411 402 EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-------- 473 (755)
Q Consensus 402 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-------- 473 (755)
.|.++.+ +...+|++||++|.+| |.+.+|+|+||. |+|++
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~---------------------P~Vv~yk~~pl~~ 300 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKT---------------------PMVVGYRMKPLTF 300 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCC---------------------CEEEEEcCCHHHH
Confidence 3554432 3567999999999999 666779999976 34443
Q ss_pred ---------CCCCcccccCC-c----EEeCCCCHHHHHHHHHHHhcCC
Q 004411 474 ---------EFIGCSPSLSG-A----IRVNPWNVDAVADAMDSALQME 507 (755)
Q Consensus 474 ---------e~~G~~~~l~~-a----i~VnP~d~~~~A~ai~~aL~m~ 507 (755)
.+.+....+.+ + ++-+-.+++.+++++.+.|+.+
T Consensus 301 ~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 301 LIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 12333333321 1 2224457889999999999877
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.4e-06 Score=83.60 Aligned_cols=72 Identities=24% Similarity=0.300 Sum_probs=57.4
Q ss_pred cCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC--CCCceEEcCCceEEEec
Q 004411 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG--VEKLGLSAEHGYFTRWS 659 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~--i~~l~liaenGa~i~~~ 659 (755)
...++||+|+||||+|.. .. .+....+|.+|.+ .|..|+.+|..+...+..+-.. ++.+++|||||+.|+.+
T Consensus 5 ~~~~lIFtDlD~TLl~~~-ye---~~pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p 78 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHS-YE---WQPAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLP 78 (274)
T ss_pred ccceEEEEcccCcccCCC-CC---CCccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEec
Confidence 357899999999999932 22 3456677888885 6999999999999987666554 46688999999999987
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.00052 Score=75.36 Aligned_cols=301 Identities=16% Similarity=0.235 Sum_probs=174.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCCc----cchHHHH--HHhhcCCCeEEEEEecCC---------CchhhhhcCCCh
Q 004411 173 LSANKVFADKVMEVINPDEDYVWIHDYH----LMVLPSF--LRKRFHRVKVGFFLHSPF---------PSSEIYRTLPVR 237 (755)
Q Consensus 173 ~~vN~~fa~~i~~~~~~~~DiVwvhDyh----l~llp~~--lr~~~~~~~i~~flH~Pf---------P~~e~~r~lp~~ 237 (755)
.+.+++|+- ......|++..||+|--. ...+|-. +|+++|+.++..+--+|- +..-.-+.+|..
T Consensus 32 ~r~~eRfg~-~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFGF-YKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhcc-cCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 456667761 123334667899999765 3345544 899999999998876652 222122335543
Q ss_pred H-HHHHHh---hhCCEEEEeCHHHHHHHHHHHhhHhCccccccCce----------------------eE----------
Q 004411 238 D-EILKSL---LNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGY----------------------IG---------- 281 (755)
Q Consensus 238 ~-~il~~l---l~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~----------------------~~---------- 281 (755)
. ..++.. ...|++.|...+.=-|++..|.+. |+..---++. +.
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~ 189 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIPLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDA 189 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCCEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHH
Confidence 2 222333 345777666666666666666432 2211000000 00
Q ss_pred ---EEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCC-ceEEEEeccccccCChHHHHHHHHHHHHhCCC
Q 004411 282 ---LDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPD 357 (755)
Q Consensus 282 ---i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~ 357 (755)
...+.+. |.+.. +...... ..+........+|.+.++ +++++..+.- ..--...+.|+..+++++|+
T Consensus 190 ~Rf~~LGa~~--v~v~G---NlKfd~~--~~~~~~~~~~~~r~~l~~~r~v~iaaSTH--~GEeei~l~~~~~l~~~~~~ 260 (419)
T COG1519 190 QRFRSLGAKP--VVVTG---NLKFDIE--PPPQLAAELAALRRQLGGHRPVWVAASTH--EGEEEIILDAHQALKKQFPN 260 (419)
T ss_pred HHHHhcCCcc--eEEec---ceeecCC--CChhhHHHHHHHHHhcCCCCceEEEecCC--CchHHHHHHHHHHHHhhCCC
Confidence 0111121 11111 1111111 123344566778888876 8899888882 22333477899999999998
Q ss_pred CCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC-------CCccEEEecCCCChhhHHHHHHhCcEEEEcC
Q 004411 358 LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP-------GYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (755)
Q Consensus 358 ~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~-------~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (755)
.. || ++ | +.++. -..+.+++.+.|-+++.- ..++|.+.. +.-|+..+|++||++.|--
T Consensus 261 ~l----lI-lV-P---RHpER---f~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAFVGG 325 (419)
T COG1519 261 LL----LI-LV-P---RHPER---FKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAFVGG 325 (419)
T ss_pred ce----EE-Ee-c---CChhh---HHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEEECC
Confidence 64 43 33 4 33432 356778888877665321 122454333 4779999999999987644
Q ss_pred -C--CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe----CCCCccccc---CCcEEeCCCCHHHHHHHH
Q 004411 431 -V--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS----EFIGCSPSL---SGAIRVNPWNVDAVADAM 500 (755)
Q Consensus 431 -~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~l---~~ai~VnP~d~~~~A~ai 500 (755)
+ .-|-| ++|+.+|+. |+|.- .|.-+.+.+ ++++.|+. .+.+++++
T Consensus 326 Slv~~GGHN--~LEpa~~~~---------------------pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v 380 (419)
T COG1519 326 SLVPIGGHN--PLEPAAFGT---------------------PVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAV 380 (419)
T ss_pred cccCCCCCC--hhhHHHcCC---------------------CEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHH
Confidence 3 23444 579999864 45543 333344444 24677874 88888888
Q ss_pred HHHhcCCHHHHHHHHHHHhhHhhhc
Q 004411 501 DSALQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~v~~~ 525 (755)
...++. +++|..+.++..+.|.++
T Consensus 381 ~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 381 ELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 888876 667888888888888766
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.8e-06 Score=84.01 Aligned_cols=71 Identities=13% Similarity=0.174 Sum_probs=56.0
Q ss_pred EEEecCCCcCCCCCC--------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhH---HhhhcC-------CCCceE
Q 004411 587 LILLDYDGTVMPQTS--------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSL---GNWFSG-------VEKLGL 648 (755)
Q Consensus 587 lI~lD~DGTL~~~~~--------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L---~~~f~~-------i~~l~l 648 (755)
+|++|+||||+.... .....++.+.+++++|.+ .|+.|+++|||+.... ++|+.. +|.-++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l 79 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV 79 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE
Confidence 589999999998420 014778999999999997 5999999999998876 477755 344578
Q ss_pred EcCCceEEEe
Q 004411 649 SAEHGYFTRW 658 (755)
Q Consensus 649 iaenGa~i~~ 658 (755)
++.||+++..
T Consensus 80 i~~~g~~~~~ 89 (157)
T smart00775 80 LLSPDRLFAA 89 (157)
T ss_pred EEcCCcchhh
Confidence 8999998854
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.14 E-value=4.9e-06 Score=73.07 Aligned_cols=87 Identities=16% Similarity=0.172 Sum_probs=71.4
Q ss_pred EEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-C--cEEeCCCCHHHHHHHHH
Q 004411 425 CCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-G--AIRVNPWNVDAVADAMD 501 (755)
Q Consensus 425 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--ai~VnP~d~~~~A~ai~ 501 (755)
+++.|+..+|+++..+|+||||. |+|.+...++...+. + ++.++ |++++++++.
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~---------------------~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~ 57 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGT---------------------PVISDDSPGLREIFEDGEHIITYN--DPEELAEKIE 57 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCC---------------------eEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHH
Confidence 46778888999999999999963 667666777777773 3 67777 9999999999
Q ss_pred HHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHH
Q 004411 502 SALQMENQEKILRHEKHYKYIS-SHDVAYWAKSID 535 (755)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 535 (755)
.+++.| ++++...++++++|. .|++.+=++.++
T Consensus 58 ~ll~~~-~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 58 YLLENP-EERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHCCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 999965 578888888999997 688887777765
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00013 Score=71.46 Aligned_cols=166 Identities=20% Similarity=0.270 Sum_probs=109.9
Q ss_pred HhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC-C-CCc-eEEcCCceE
Q 004411 579 AYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG-V-EKL-GLSAEHGYF 655 (755)
Q Consensus 579 ~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~-i-~~l-~liaenGa~ 655 (755)
++++-..-|+.+|.||||++ .....++++.+.|++|.. +.++-++-|-.++-+.+.++. + ... +..+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 34455566999999999998 567889999999999885 678889999999988888853 2 222 466999987
Q ss_pred EEecCCCceeEcccCcCccHH--HHHHHHHH---HHh-----cCCCCcEEeecceEEEEEe--ccCCCC----cc-----
Q 004411 656 TRWSKNSAWEICSLTRDFDWK--EIAEPVMK---LYT-----ETTDGSFIEDKETAIVWHH--QHADPH----FG----- 714 (755)
Q Consensus 656 i~~~~~~~w~~~~~~~~~~w~--~~v~~i~~---~y~-----~~t~gs~iE~k~~~l~~hy--r~ad~~----~~----- 714 (755)
-+..+.. .. . ..-..|. +.++++++ .|. ....|.+||-+.-.+...- |++..+ |.
T Consensus 80 ~yk~gk~-~~--~-Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk 155 (252)
T KOG3189|consen 80 AYKGGKL-LS--K-QSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKK 155 (252)
T ss_pred EeeCCcc-hh--H-HHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhh
Confidence 7665322 11 0 0112332 33333332 222 2356999997665554332 344211 21
Q ss_pred hhhHHHHHHHHHHHhcCCCeEE-EecCeEEEEEeCCCCCC
Q 004411 715 SCQAKELLDHLENVLANEPVVV-KRGQHIVEVKPQVCQHQ 753 (755)
Q Consensus 715 ~~qa~el~~~L~~~l~~~~~~V-~sG~~~VEV~p~gvnKG 753 (755)
...-..+++.|++.+++..+.. +-|+-.+||-|.|++|-
T Consensus 156 ~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKt 195 (252)
T KOG3189|consen 156 HKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKT 195 (252)
T ss_pred hhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchh
Confidence 1122357888999999888775 47899999999999984
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00015 Score=82.01 Aligned_cols=122 Identities=11% Similarity=0.084 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004411 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (755)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (755)
...|+|++++.++.|++. |=+ |..+ . ....+.++ .+ |. .|+.+.+ +...++..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y~-----nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----YD-----NVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----cC-----CcEEECC-cChHHHHHHHH
Confidence 899999999999999987 654 5432 1 11344444 22 22 3665654 45567999999
Q ss_pred hCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCC-CCcccccCCcEEeCCCCHHHHHHHH
Q 004411 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-IGCSPSLSGAIRVNPWNVDAVADAM 500 (755)
Q Consensus 422 ~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l~~ai~VnP~d~~~~A~ai 500 (755)
.||+++.+|..||+++...||+..|. |++.=+. .|..+.+..|.++++.|+++|+++|
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~G~---------------------pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i 405 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEYNL---------------------LILGFEETAHNRDFIASENIFEHNEVDQLISKL 405 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHcCC---------------------cEEEEecccCCcccccCCceecCCCHHHHHHHH
Confidence 99999999999999999999999753 5555444 4555555678999999999999999
Q ss_pred HHHhcCCH
Q 004411 501 DSALQMEN 508 (755)
Q Consensus 501 ~~aL~m~~ 508 (755)
.++|+.+.
T Consensus 406 ~~lL~d~~ 413 (438)
T TIGR02919 406 KDLLNDPN 413 (438)
T ss_pred HHHhcCHH
Confidence 99999874
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.84 E-value=2.5e-05 Score=72.76 Aligned_cols=51 Identities=18% Similarity=0.249 Sum_probs=41.0
Q ss_pred eEEEecCCCcCCCCCC---CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHH
Q 004411 586 RLILLDYDGTVMPQTS---EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLG 637 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~---~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~ 637 (755)
|+|++|+||||+.... ....+.++++++|++|.+ .+..++++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6899999999987421 113477999999999986 48999999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0005 Score=69.36 Aligned_cols=142 Identities=16% Similarity=0.255 Sum_probs=89.7
Q ss_pred HHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc-C-C-CCc-eEEcCCceEEEecCCCceeEccc-CcC-ccHHHHHHHHH
Q 004411 610 VLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS-G-V-EKL-GLSAEHGYFTRWSKNSAWEICSL-TRD-FDWKEIAEPVM 683 (755)
Q Consensus 610 ~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~-~-i-~~l-~liaenGa~i~~~~~~~w~~~~~-~~~-~~w~~~v~~i~ 683 (755)
+.++|++|.+ +..|.||||-.+...++.+. . + .+. .+.+|||...+..++..|...+. ... ...++.+.-++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678899996 78999999999999888884 2 2 222 58899999888776666754321 000 11122333333
Q ss_pred HHHh----cCCCCcEEeecceEEEEEe--ccCCCC----cc----hhhH-HHHHHHHHHHhcCCCeEEE-ecCeEEEEEe
Q 004411 684 KLYT----ETTDGSFIEDKETAIVWHH--QHADPH----FG----SCQA-KELLDHLENVLANEPVVVK-RGQHIVEVKP 747 (755)
Q Consensus 684 ~~y~----~~t~gs~iE~k~~~l~~hy--r~ad~~----~~----~~qa-~el~~~L~~~l~~~~~~V~-sG~~~VEV~p 747 (755)
.+.. ....|.+||.+...|.+.- |+|..+ |. .... +.+++.|++.+++..+.+. -|...|||.|
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp 158 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFP 158 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEcccc
Confidence 3322 1346999999999998875 444211 21 1112 2588889999998888875 7899999999
Q ss_pred CCCCCC
Q 004411 748 QVCQHQ 753 (755)
Q Consensus 748 ~gvnKG 753 (755)
+|++|.
T Consensus 159 ~GwDKt 164 (220)
T PF03332_consen 159 KGWDKT 164 (220)
T ss_dssp TT-SGG
T ss_pred CCccHH
Confidence 999996
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00018 Score=75.84 Aligned_cols=73 Identities=15% Similarity=0.220 Sum_probs=55.3
Q ss_pred CceEEEecCCCcCCCCCCCCCCC-CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC--CC-ceEEcCCceEEEe
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRP-STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EK-LGLSAEHGYFTRW 658 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p-~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i--~~-l~liaenGa~i~~ 658 (755)
..++|++||||||++.. ....+ ++.+.++|++|.+ .|..++|+|++++....+.+... .+ ...|..+|...+.
T Consensus 125 ~~kvIvFDLDgTLi~~~-~~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~ 201 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDE-EPVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEE 201 (301)
T ss_pred cceEEEEecCCCCcCCC-CccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccC
Confidence 46899999999999853 11112 5999999999997 48899999999999888777654 22 2467777777654
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00023 Score=65.75 Aligned_cols=70 Identities=14% Similarity=0.191 Sum_probs=53.3
Q ss_pred EEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC----CceEEcCCceEEE
Q 004411 587 LILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE----KLGLSAEHGYFTR 657 (755)
Q Consensus 587 lI~lD~DGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~----~l~liaenGa~i~ 657 (755)
+++||+||||.+..+ ....+.+.+.+.|++|+++ +..++|+||+....++.++..+. --.+++.++....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 79 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY 79 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh
Confidence 589999999998643 1236788999999999975 78999999999999999987542 1135555655443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.001 Score=70.31 Aligned_cols=71 Identities=14% Similarity=0.155 Sum_probs=52.6
Q ss_pred CceEEEecCCCcCCCCCCCCCCC---CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC--CC-ceEEcCCceEEE
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRP---STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EK-LGLSAEHGYFTR 657 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p---~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i--~~-l~liaenGa~i~ 657 (755)
..++|++||||||++. ...+ ++.+.++|++|.+ .|..++|+|+.+...+...+... +. ...|..+|....
T Consensus 127 ~~~~i~~D~D~TL~~~---~~~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~ 202 (303)
T PHA03398 127 IPHVIVFDLDSTLITD---EEPVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAG 202 (303)
T ss_pred eccEEEEecCCCccCC---CCccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCccc
Confidence 4589999999999985 3333 5899999999997 58899999988888777777643 22 234555665554
Q ss_pred e
Q 004411 658 W 658 (755)
Q Consensus 658 ~ 658 (755)
.
T Consensus 203 k 203 (303)
T PHA03398 203 E 203 (303)
T ss_pred c
Confidence 3
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0029 Score=59.35 Aligned_cols=55 Identities=15% Similarity=0.131 Sum_probs=42.0
Q ss_pred eEEEecCCCcCCCCCC--CCC-------CCCHHHHHHHHHHhcCCCCcEEEEcCC-ChhhHHhhhc
Q 004411 586 RLILLDYDGTVMPQTS--EDK-------RPSTEVLSILNDLCNDPKNAVFIVSGR-GKDSLGNWFS 641 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~--~~~-------~p~~~~~~~L~~L~~d~~~~V~IvSGR-~~~~L~~~f~ 641 (755)
|+|++|+||||++..- ... .+-+.+.++|+.|.+ .+..++|+|++ ........+.
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHH
Confidence 6899999999998521 111 246799999999986 48899999999 6766655554
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0012 Score=69.37 Aligned_cols=54 Identities=9% Similarity=0.173 Sum_probs=44.0
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+|++++|+||||... + .+.+...++|++|.+ .+..++++|||+....+.+...+
T Consensus 1 ~~~v~~DlDGtL~~~---~-~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMHD---N-VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEeC---C-eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 478999999999973 3 567899999999997 48999999999987665555443
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0011 Score=69.88 Aligned_cols=49 Identities=18% Similarity=0.205 Sum_probs=39.3
Q ss_pred eEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh
Q 004411 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (755)
|+|++|+||||.........+.+.+.++|++|.+. |..++++|||+...
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~-G~~~~~~Tn~~~~~ 50 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGA-SVKVRFVTNTTKES 50 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHC-CCeEEEEECCCCCC
Confidence 78999999999974211123677999999999974 89999999988775
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0018 Score=67.92 Aligned_cols=65 Identities=17% Similarity=0.245 Sum_probs=48.1
Q ss_pred eEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC---CChhhHHhhhcCCC-Cc---eEEcCCceE
Q 004411 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG---RGKDSLGNWFSGVE-KL---GLSAEHGYF 655 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG---R~~~~L~~~f~~i~-~l---~liaenGa~ 655 (755)
|+|++|+||||.+. +... +.+.++|++|.+ .+..|+++|| |+...+.+.+..+. ++ .+++.+|+.
T Consensus 2 ~~~~~D~DGtl~~~---~~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~ 73 (249)
T TIGR01457 2 KGYLIDLDGTMYKG---KERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMAT 73 (249)
T ss_pred CEEEEeCCCceEcC---CeeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHH
Confidence 68999999999983 3333 478999999997 4899999995 88888888776431 11 255666653
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0028 Score=59.38 Aligned_cols=57 Identities=21% Similarity=0.342 Sum_probs=44.7
Q ss_pred eEEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC--------hhhHHhhhcCC
Q 004411 586 RLILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG--------KDSLGNWFSGV 643 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~--------~~~L~~~f~~i 643 (755)
|+|++|+||||++... ....+.+.+.++|+.|.+ .+..++|+|+++ ...+++.+..+
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~ 70 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEEL 70 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHC
Confidence 6899999999995211 124567899999999986 489999999999 67777777654
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0016 Score=69.50 Aligned_cols=50 Identities=18% Similarity=0.335 Sum_probs=38.7
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhh
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~ 639 (755)
.++|++|+||||.+. . .+-+.+.++|++|.+ .+..++++|||+......+
T Consensus 2 ~~~~~~D~DGtl~~~---~-~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~~ 51 (279)
T TIGR01452 2 AQGFIFDCDGVLWLG---E-RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAEY 51 (279)
T ss_pred ccEEEEeCCCceEcC---C-eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHH
Confidence 579999999999873 2 244568999999996 4889999999875544443
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.002 Score=69.86 Aligned_cols=53 Identities=17% Similarity=0.231 Sum_probs=42.4
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+.++|++|+||||... + .+-+...++|++|.+ .+..++++|+|+....+..+.
T Consensus 27 ~~~~~~~D~DGtl~~~---~-~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~ 79 (311)
T PLN02645 27 SVETFIFDCDGVIWKG---D-KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGK 79 (311)
T ss_pred hCCEEEEeCcCCeEeC---C-ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHH
Confidence 4789999999999983 3 345778999999997 489999999999666555553
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0011 Score=64.22 Aligned_cols=58 Identities=19% Similarity=0.202 Sum_probs=40.6
Q ss_pred ceEEEecCCCcCCCCCC----CCCCCCHH-HH--HHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 585 SRLILLDYDGTVMPQTS----EDKRPSTE-VL--SILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~----~~~~p~~~-~~--~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.|++++|+||||++... ....+..- +. .+|++|.+ .+..++|+||++...+...+..+
T Consensus 1 ~~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~~~i~~Lk~-~G~~i~IvTn~~~~~~~~~l~~~ 65 (154)
T TIGR01670 1 IRLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDGYGIRCALK-SGIEVAIITGRKAKLVEDRCKTL 65 (154)
T ss_pred CeEEEEeCceeEEcCeEEECCCCcEEEEEechhHHHHHHHHH-CCCEEEEEECCCCHHHHHHHHHc
Confidence 48999999999998321 11111110 10 27888886 48999999999999888888654
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0023 Score=63.90 Aligned_cols=59 Identities=19% Similarity=0.227 Sum_probs=42.1
Q ss_pred CceEEEecCCCcCCCCC----CCCCCCCHHHH---HHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 584 NSRLILLDYDGTVMPQT----SEDKRPSTEVL---SILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~----~~~~~p~~~~~---~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.+|+|++|+||||++.. ........... ..++.|.+ .+..++|+|||+...+.+.+..+
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~-~Gi~v~I~T~~~~~~v~~~l~~l 85 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLT-SGIEVAIITGRKSKLVEDRMTTL 85 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHc
Confidence 68999999999999741 11222222222 46777775 58899999999999988887754
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.36 Score=53.62 Aligned_cols=258 Identities=20% Similarity=0.232 Sum_probs=133.0
Q ss_pred HHHHHHHHhCCCCCEEEEeCCcc--chHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHH
Q 004411 179 FADKVMEVINPDEDYVWIHDYHL--MVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFD 256 (755)
Q Consensus 179 fa~~i~~~~~~~~DiVwvhDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~ 256 (755)
..+.+.+ .+| |+|..=||.- +.+...+|++.+..|+.++. ++.+|.==++|-..++.....=++.| .
T Consensus 74 ~~~~~~~-~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~~D~ll~if---P 142 (373)
T PF02684_consen 74 LVERIKE-EKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKYVDHLLVIF---P 142 (373)
T ss_pred HHHHHHH-cCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHHHhheeECC---c
Confidence 3334433 255 7888888863 46788999999888887653 34454333556555554422211222 1
Q ss_pred HHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--CCceEEEE--e
Q 004411 257 YARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILG--V 332 (755)
Q Consensus 257 ~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~--V 332 (755)
+-..|.. +.| +-..|-|+. =+|.-... .. ....++++ .++++|.- =
T Consensus 143 FE~~~y~------------~~g-~~~~~VGHP--------l~d~~~~~-----~~----~~~~~~~~l~~~~~iIaLLPG 192 (373)
T PF02684_consen 143 FEPEFYK------------KHG-VPVTYVGHP--------LLDEVKPE-----PD----RAEAREKLLDPDKPIIALLPG 192 (373)
T ss_pred ccHHHHh------------ccC-CCeEEECCc--------chhhhccC-----CC----HHHHHHhcCCCCCcEEEEeCC
Confidence 1122221 111 112333432 22211111 11 11223332 34444333 3
Q ss_pred ccccccC-ChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCC
Q 004411 333 DDMDLFK-GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411 (755)
Q Consensus 333 dRld~~K-Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v 411 (755)
+|-...| .++..++|++++.+++|+++ ++....+. .. ...+.+.....+.. .++..+
T Consensus 193 SR~~EI~rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~~---~~~i~~~~~~~~~~------~~~~~~---- 250 (373)
T PF02684_consen 193 SRKSEIKRLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----VH---EELIEEILAEYPPD------VSIVII---- 250 (373)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----HH---HHHHHHHHHhhCCC------CeEEEc----
Confidence 6665544 45888999999999999987 55443321 11 12233333222111 023322
Q ss_pred ChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCC-----cE
Q 004411 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSG-----AI 486 (755)
Q Consensus 412 ~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~-----ai 486 (755)
..+...+++.||+.+++| |.+-+|++..+.+....=...-..-- -...+|-..+.|..-.+-| =+
T Consensus 251 -~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~----iak~lvk~~~isL~Niia~~~v~PEl 320 (373)
T PF02684_consen 251 -EGESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYF----IAKRLVKVKYISLPNIIAGREVVPEL 320 (373)
T ss_pred -CCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHH----HHHHhhcCCEeechhhhcCCCcchhh
Confidence 346788999999999999 88999999987631000000000000 0011223555555544422 13
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHH
Q 004411 487 RVNPWNVDAVADAMDSALQMENQ 509 (755)
Q Consensus 487 ~VnP~d~~~~A~ai~~aL~m~~~ 509 (755)
+-+-.+++.+++++...|..++.
T Consensus 321 iQ~~~~~~~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 321 IQEDATPENIAAELLELLENPEK 343 (373)
T ss_pred hcccCCHHHHHHHHHHHhcCHHH
Confidence 45567899999999999987653
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.013 Score=61.02 Aligned_cols=63 Identities=19% Similarity=0.316 Sum_probs=47.0
Q ss_pred ccccChHHHHHHhhccCceEEEecCCCcCCCCCC---CC-C---------------------------CCCHHHHHHHHH
Q 004411 568 FRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS---ED-K---------------------------RPSTEVLSILND 616 (755)
Q Consensus 568 f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~---~~-~---------------------------~p~~~~~~~L~~ 616 (755)
..=.++++|.+.....+.-.|+||+||||++..+ .. . .|-+.+.++|+.
T Consensus 46 ~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~ 125 (237)
T TIGR01672 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHH
Confidence 3347788999888876666999999999997554 11 1 111227888999
Q ss_pred HhcCCCCcEEEEcCC
Q 004411 617 LCNDPKNAVFIVSGR 631 (755)
Q Consensus 617 L~~d~~~~V~IvSGR 631 (755)
|.+ .|.+++|+|+|
T Consensus 126 l~~-~G~~i~iVTnr 139 (237)
T TIGR01672 126 HQR-RGDAIFFVTGR 139 (237)
T ss_pred HHH-CCCEEEEEeCC
Confidence 986 48999999999
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.21 Score=53.58 Aligned_cols=169 Identities=12% Similarity=0.131 Sum_probs=109.6
Q ss_pred CceEEEEeccccccCChHHHHHHHHHHHHh---CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004411 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQ---HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~---~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~ 401 (755)
...++++--...+...+.-++.|.+.+-++ .+.---++ |.+|++ .||..+.+.++|++. .|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciITG----KGPlkE~Y~~~I~~~-----------~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIITG----KGPLKEKYSQEIHEK-----------NL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEcC----CCchhHHHHHHHHHh-----------cc
Confidence 346788888899999999999999855221 11111122 444553 577777777776654 46
Q ss_pred ccEEEecCCCChhhHHHHHHhCcE--EEEcCCCcCCCcc--ceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC
Q 004411 402 EPIVIIKEPLSTQDKVPYYAIAEC--CVVNCVRDGMNLV--PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (755)
Q Consensus 402 ~pV~~~~~~v~~~el~aly~~ADv--~vvtS~~EG~nLv--~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (755)
+.|.+.+--++-++++.++..||. |+=||. -|.-|. +...--|+. |+++-.|.-
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGcgl---------------------PvcA~~fkc 375 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGCGL---------------------PVCAVNFKC 375 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcCCC---------------------ceeeecchh
Confidence 678888888999999999999994 566663 454444 334444432 666667765
Q ss_pred ccccc---CCcEEeCCCCHHHHHHHHHHHhcCC---HHHHHHHHHHHhhHhhhcCHHHHHHHHHHH
Q 004411 478 CSPSL---SGAIRVNPWNVDAVADAMDSALQME---NQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (755)
Q Consensus 478 ~~~~l---~~ai~VnP~d~~~~A~ai~~aL~m~---~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 537 (755)
..+.+ .+|++++ |.+++|+.|..+++.- ..+-. +.++-+++..-.+|.++.-+.
T Consensus 376 l~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 376 LDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWERT 435 (444)
T ss_pred HHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHHh
Confidence 55555 2699998 8999999999998832 22221 334444444557777755443
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.023 Score=54.88 Aligned_cols=66 Identities=17% Similarity=0.244 Sum_probs=55.1
Q ss_pred hhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEE
Q 004411 580 YNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLS 649 (755)
Q Consensus 580 y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~li 649 (755)
.++...|-|++|+|.||++.. +...++++++.+..+.+ .+..|+|+|-.....+..+...+ ++.+|
T Consensus 23 L~~~Gikgvi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l-~v~fi 88 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPWD--NPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKL-GVPFI 88 (175)
T ss_pred HHHcCCcEEEEeccCceeccc--CCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhc-CCcee
Confidence 345588999999999999974 56678999999999997 59999999999999999888765 24443
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.033 Score=58.29 Aligned_cols=86 Identities=21% Similarity=0.460 Sum_probs=58.0
Q ss_pred HHHHHHHHHhCC---CCCEEEEeCCccchHHHHHHhhcC------CCeEEEEEecC-CCc---hhhhh--cCCCh-----
Q 004411 178 VFADKVMEVINP---DEDYVWIHDYHLMVLPSFLRKRFH------RVKVGFFLHSP-FPS---SEIYR--TLPVR----- 237 (755)
Q Consensus 178 ~fa~~i~~~~~~---~~DiVwvhDyhl~llp~~lr~~~~------~~~i~~flH~P-fP~---~e~~r--~lp~~----- 237 (755)
.|+.++++.++. .-|+||+||+|..++|.+||.... ++++.|++|.. |-. .+.+. .+|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~ 197 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNL 197 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-ST
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccc
Confidence 455555555432 349999999999999999999753 59999999964 221 12222 12321
Q ss_pred ---------HHHHHHhhhCCEEEEeCHHHHHHHHH
Q 004411 238 ---------DEILKSLLNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 238 ---------~~il~~ll~~Dligf~t~~~~~~Fl~ 263 (755)
..+-.|+..||.|..-++.|++.-++
T Consensus 198 ~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 198 DEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred cccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 13446789999999999999877654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.0097 Score=58.46 Aligned_cols=49 Identities=20% Similarity=0.297 Sum_probs=36.6
Q ss_pred CceEEEecCCCcCCCCCCCCC---------CCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 584 NSRLILLDYDGTVMPQTSEDK---------RPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~---------~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
+.|++++|+||||+...+... .+-+.+.++|++|.+ .+..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 468999999999997432111 134779999999986 4899999996554
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.064 Score=51.52 Aligned_cols=98 Identities=16% Similarity=0.286 Sum_probs=49.3
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChH-----HHHHH-hhhCCEEEEeCH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD-----EILKS-LLNSDLIGFHTF 255 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~-----~il~~-ll~~Dligf~t~ 255 (755)
++++..++ |+|++|.++...+...... ++++.+++|.+++.........+.. .+.+. .-.+|.+..-+.
T Consensus 74 ~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~ 148 (177)
T PF13439_consen 74 RLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSE 148 (177)
T ss_dssp HHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSH
T ss_pred HHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECH
Confidence 33444455 8999999887755433322 8899999998874211111111111 11112 245788877776
Q ss_pred HHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCccccc
Q 004411 256 DYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFE 304 (755)
Q Consensus 256 ~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~ 304 (755)
.-++.+.+ .|++ ..+|.++|+|||+++|+
T Consensus 149 ~~~~~l~~-----~~~~---------------~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 149 STKDELIK-----FGIP---------------PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHH-----hCCc---------------ccCCEEEECCccHHHcC
Confidence 65555543 2321 24788999999999884
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.93 E-value=1.2 Score=48.96 Aligned_cols=275 Identities=15% Similarity=0.148 Sum_probs=141.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCc--cchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHh
Q 004411 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYH--LMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL 244 (755)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyh--l~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~l 244 (755)
..|..|.+. ++.+.+. +| |++..=|+. -..+...+|+.+|++||.++. -| .+|.==|.|-..+..
T Consensus 69 ~llk~~~~~----~~~i~~~-kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV---~P--sVWAWr~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRREL----VRYILAN-KP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV---SP--SVWAWRPKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHH----HHHHHhc-CC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE---Cc--ceeeechhhHHHHHH-
Confidence 456666543 2333332 45 777776764 236778999999999998754 23 344222444333222
Q ss_pred hhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-
Q 004411 245 LNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF- 323 (755)
Q Consensus 245 l~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~- 323 (755)
.+|++.---+... .|.. + .|+. ..|-|+ +=.|.-.+.+ .....|+++
T Consensus 136 -~~D~lLailPFE~-~~y~---k-~g~~---------~~yVGH--------pl~d~i~~~~---------~r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILPFEP-AFYD---K-FGLP---------CTYVGH--------PLADEIPLLP---------DREAAREKLG 183 (381)
T ss_pred -HhhHeeeecCCCH-HHHH---h-cCCC---------eEEeCC--------hhhhhccccc---------cHHHHHHHhC
Confidence 2354432111111 1211 0 1111 223333 1122221221 112355555
Q ss_pred ---CCceEEEEe-cc-ccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 004411 324 ---DGKIVILGV-DD-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGK 398 (755)
Q Consensus 324 ---~~~~vil~V-dR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~ 398 (755)
..+.+.+-- +| -+-..-.+..++|++++.+++|+++ ++.=..+ ..++.++. +....-..
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~---~~~~~~~~---- 247 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIE---EALKWEVA---- 247 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHH---HHhhcccc----
Confidence 334444443 33 4556667888899999999999987 4432221 23333222 22211100
Q ss_pred CCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEE------
Q 004411 399 PGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV------ 472 (755)
Q Consensus 399 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~------ 472 (755)
.+..+ +...+....+.+||+.+..| |.+.+|++.|+.+ ++|.
T Consensus 248 ---~~~~~----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P--------------------~Vv~Yk~~~i 295 (381)
T COG0763 248 ---GLSLI----LIDGEKRKAFAAADAALAAS-----GTATLEAALAGTP--------------------MVVAYKVKPI 295 (381)
T ss_pred ---CceEE----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCC--------------------EEEEEeccHH
Confidence 01121 23457888999999999998 8999999999762 2232
Q ss_pred ----------eCCCCcccccCCcEEe-----CCCCHHHHHHHHHHHhcCCH--HHHHHHHHHHhhHhhhcCHHHHHHHH
Q 004411 473 ----------SEFIGCSPSLSGAIRV-----NPWNVDAVADAMDSALQMEN--QEKILRHEKHYKYISSHDVAYWAKSI 534 (755)
Q Consensus 473 ----------Se~~G~~~~l~~ai~V-----nP~d~~~~A~ai~~aL~m~~--~er~~r~~~~~~~v~~~~~~~W~~~~ 534 (755)
..+.+....+-|-.+| .-..++.+|.++...+..+. ++..+....+++++.+..+..=+.+.
T Consensus 296 t~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~ 374 (381)
T COG0763 296 TYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQA 374 (381)
T ss_pred HHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 2233322222221111 12347899999999998762 12333444566666655344444333
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.0093 Score=53.52 Aligned_cols=49 Identities=18% Similarity=0.344 Sum_probs=35.9
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 588 I~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
|++|+||||.. ...+-+...++|++|.+. +..++++|-++...-+.+..
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L~~~-g~~~~~lTNns~~s~~~~~~ 49 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDALRER-GKPVVFLTNNSSRSREEYAK 49 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHHHHT-TSEEEEEES-SSS-HHHHHH
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHH
Confidence 68999999997 344567889999999974 78899999877555444443
|
... |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.036 Score=53.12 Aligned_cols=46 Identities=22% Similarity=0.289 Sum_probs=36.5
Q ss_pred eEEEecCCCcCCCCCCCC-------CCCCHHHHHHHHHHhcCCCCcEEEEcCCC
Q 004411 586 RLILLDYDGTVMPQTSED-------KRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~-------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~ 632 (755)
+++++|+||||++..+.. ..+.+.+.++|+.|.+ .+..++|+|+.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRA-AGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHH-CCCEEEEEeCCC
Confidence 478999999999865311 2356789999999996 489999999876
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.1 Score=51.43 Aligned_cols=56 Identities=14% Similarity=0.171 Sum_probs=44.0
Q ss_pred cCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC-hhhHHhhhc
Q 004411 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG-KDSLGNWFS 641 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~-~~~L~~~f~ 641 (755)
-..+++++|+||||+... ...+.+.+.++|++|.+ .+..++|+|+.+ ...+..++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~--~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~ 79 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPD--HNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEK 79 (170)
T ss_pred CCCCEEEEecCCccccCC--CCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHH
Confidence 477999999999999753 33567899999999986 478999999998 455554443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.076 Score=53.58 Aligned_cols=61 Identities=18% Similarity=0.211 Sum_probs=46.6
Q ss_pred ChHHHHHHhhccCceEEEecCCCcCCCCCC---CC---------CCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 572 GMHHIASAYNKTNSRLILLDYDGTVMPQTS---ED---------KRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 572 ~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~---~~---------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
..+.+++.++...+|+|++|+|-||++..+ .+ ...++++...+.+|.+ .+..|+|||=-+.
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~ 102 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccch
Confidence 345567778889999999999999998221 11 2368899999999986 5899999985444
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.1 Score=54.34 Aligned_cols=62 Identities=13% Similarity=0.237 Sum_probs=45.9
Q ss_pred ccChHHHHHHhhccCceEEEecCCCcCCCCCCC-------------------------------CCCCCHHHHHHHHHHh
Q 004411 570 KLGMHHIASAYNKTNSRLILLDYDGTVMPQTSE-------------------------------DKRPSTEVLSILNDLC 618 (755)
Q Consensus 570 ~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~-------------------------------~~~p~~~~~~~L~~L~ 618 (755)
=.++++|.+.....+.-.|.+|+|||++...+. ...|-+.++++|+.|.
T Consensus 48 ~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 48 WVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 367888888765544558999999999953210 1124455899999998
Q ss_pred cCCCCcEEEEcCCC
Q 004411 619 NDPKNAVFIVSGRG 632 (755)
Q Consensus 619 ~d~~~~V~IvSGR~ 632 (755)
+ .+..++++|||.
T Consensus 128 ~-~G~~I~iVTnR~ 140 (237)
T PRK11009 128 K-RGDSIYFITGRT 140 (237)
T ss_pred H-CCCeEEEEeCCC
Confidence 6 489999999996
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.091 Score=51.56 Aligned_cols=62 Identities=23% Similarity=0.334 Sum_probs=46.0
Q ss_pred cccccChHHHHHHhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCC-CcEEEEcCCC
Q 004411 567 EFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPK-NAVFIVSGRG 632 (755)
Q Consensus 567 ~f~~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~-~~V~IvSGR~ 632 (755)
++..++.+.- -.++..+|.|++|.|.||++. ....++++..+.++++.+.-+ ..|+|+|-..
T Consensus 25 si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsa 87 (168)
T PF09419_consen 25 SIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSA 87 (168)
T ss_pred ChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence 4555665331 145679999999999999975 466778999999999997522 2589999873
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.061 Score=51.41 Aligned_cols=60 Identities=18% Similarity=0.178 Sum_probs=40.2
Q ss_pred ccCceEEEecCCCcCCCCCC----C----CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 582 KTNSRLILLDYDGTVMPQTS----E----DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~----~----~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
..++||+++|.||||++-.- . .++... ==.-++.|.+ .+.+|+|+|||.-.-+++....+
T Consensus 5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~-DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~L 72 (170)
T COG1778 5 AKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVR-DGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDL 72 (170)
T ss_pred hhhceEEEEeccceeecCeEEEcCCCceeeeeecc-CcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHc
Confidence 35789999999999997330 1 111100 0012344443 48999999999999999998764
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.054 Score=53.51 Aligned_cols=50 Identities=22% Similarity=0.198 Sum_probs=39.0
Q ss_pred cCceEEEecCCCcCCCCCC----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 583 TNSRLILLDYDGTVMPQTS----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
+..|+|++|.||||.+... ..-.+-+.+.++|++|.+ .+.+++|+|+.+.
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~~ 55 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKA-NHIKIFSFTNQPG 55 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHH-CCCEEEEEECCch
Confidence 4679999999999976532 122356889999999987 4889999998763
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.86 Score=51.25 Aligned_cols=138 Identities=13% Similarity=0.136 Sum_probs=79.4
Q ss_pred eEEEEecc-ccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc---------cc
Q 004411 327 IVILGVDD-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINL---------NF 396 (755)
Q Consensus 327 ~vil~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~---------~~ 396 (755)
.++++-.| -+..++++..++|++++.++ |+++ ++....+. .+++.+++.+.+. .++. .|
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~----~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QPFV----FLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLF 276 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeE----EEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhh
Confidence 34556677 55667888999999998655 5543 54443222 2333333333211 0000 00
Q ss_pred CCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCC
Q 004411 397 GKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI 476 (755)
Q Consensus 397 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 476 (755)
.. .++.++. ...+..++|++||++|..| |-+..|+++++. |.|+--+.
T Consensus 277 ~~---~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~---------------------P~Ilip~~ 324 (396)
T TIGR03492 277 QK---GTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGK---------------------PVIQLPGK 324 (396)
T ss_pred cc---CceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCC---------------------CEEEEeCC
Confidence 00 0133221 2467899999999999986 345599999875 33333211
Q ss_pred Cc------ccc---c-CCcEEeCCCCHHHHHHHHHHHhcCC
Q 004411 477 GC------SPS---L-SGAIRVNPWNVDAVADAMDSALQME 507 (755)
Q Consensus 477 G~------~~~---l-~~ai~VnP~d~~~~A~ai~~aL~m~ 507 (755)
+. .+. + .+++.+...+++.+++++.++|+++
T Consensus 325 ~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 325 GPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred CCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence 11 011 1 3556666678899999999999864
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.058 Score=52.63 Aligned_cols=43 Identities=26% Similarity=0.385 Sum_probs=30.9
Q ss_pred eEEEecCCCcCCCCCCCCC---------CCCHHHHHHHHHHhcCCCCcEEEEc
Q 004411 586 RLILLDYDGTVMPQTSEDK---------RPSTEVLSILNDLCNDPKNAVFIVS 629 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~~---------~p~~~~~~~L~~L~~d~~~~V~IvS 629 (755)
|+.++|+||||....+... ...+.+.+.|++|.++ +..++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~-Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK-GYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT-TEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc-CCeEEEEe
Confidence 6789999999986543211 2345799999999874 88999998
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=93.66 E-value=13 Score=41.04 Aligned_cols=256 Identities=15% Similarity=0.085 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHh--hhCCEEEE
Q 004411 175 ANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL--LNSDLIGF 252 (755)
Q Consensus 175 vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~l--l~~Dligf 252 (755)
+=..|++.+.+ .+| |+|.||.=-.-.+...+-....++||++. |-=-=+.|. .-|.-+|+.|.+ --||+---
T Consensus 55 ~~~~~~~~~~~-~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~lhf~ 128 (346)
T PF02350_consen 55 AIIELADVLER-EKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAHLHFA 128 (346)
T ss_dssp HHHHHHHHHHH-HT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-SEEEE
T ss_pred HHHHHHHHHHh-cCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhhhhcc
Confidence 33444444444 477 89999877666555555455567887653 211000121 123445555554 23677666
Q ss_pred eCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEe
Q 004411 253 HTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGV 332 (755)
Q Consensus 253 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~V 332 (755)
-|..+.++.++ .|.+. ++ +. .+-.+++|.-........+.. ....+-....++.+++..
T Consensus 129 ~t~~~~~~L~~-----~G~~~--~r----I~--------~vG~~~~D~l~~~~~~~~~~~--~~~~i~~~~~~~~iLvt~ 187 (346)
T PF02350_consen 129 PTEEARERLLQ-----EGEPP--ER----IF--------VVGNPGIDALLQNKEEIEEKY--KNSGILQDAPKPYILVTL 187 (346)
T ss_dssp SSHHHHHHHHH-----TT--G--GG----EE--------E---HHHHHHHHHHHTTCC-H--HHHHHHHCTTSEEEEEE-
T ss_pred CCHHHHHHHHh-----cCCCC--Ce----EE--------EEChHHHHHHHHhHHHHhhhh--hhHHHHhccCCCEEEEEe
Confidence 68887777764 34321 11 11 122456664422211110000 011222222344455555
Q ss_pred cccccc---CChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecC
Q 004411 333 DDMDLF---KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKE 409 (755)
Q Consensus 333 dRld~~---KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~ 409 (755)
=|.... ......+.+++.+.+. +++. +|....++ + ...+.+.+...++ ..|.++ .
T Consensus 188 H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~----p---~~~~~i~~~l~~~---------~~v~~~-~ 245 (346)
T PF02350_consen 188 HPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN----P---RGSDIIIEKLKKY---------DNVRLI-E 245 (346)
T ss_dssp S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S-----H---HHHHHHHHHHTT----------TTEEEE--
T ss_pred CcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC----c---hHHHHHHHHhccc---------CCEEEE-C
Confidence 444433 3466777888888776 5543 44444211 1 2223333332221 136655 5
Q ss_pred CCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc---CCcE
Q 004411 410 PLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL---SGAI 486 (755)
Q Consensus 410 ~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai 486 (755)
+++..++.++++.|+++|-.|- | +..||..++. |+|.=...|-.++. ..++
T Consensus 246 ~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~---------------------P~v~iR~~geRqe~r~~~~nv 299 (346)
T PF02350_consen 246 PLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGK---------------------PVVNIRDSGERQEGRERGSNV 299 (346)
T ss_dssp ---HHHHHHHHHHESEEEESSH--H---HHHHGGGGT-----------------------EEECSSS-S-HHHHHTTSEE
T ss_pred CCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCC---------------------eEEEecCCCCCHHHHhhcceE
Confidence 8999999999999999987772 2 2339999865 44443444544443 2466
Q ss_pred EeCCCCHHHHHHHHHHHhcC
Q 004411 487 RVNPWNVDAVADAMDSALQM 506 (755)
Q Consensus 487 ~VnP~d~~~~A~ai~~aL~m 506 (755)
+|. .|.+++.+||.+++..
T Consensus 300 lv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 300 LVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp EET-SSHHHHHHHHHHHHH-
T ss_pred EeC-CCHHHHHHHHHHHHhC
Confidence 666 7999999999999975
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.14 Score=55.12 Aligned_cols=58 Identities=17% Similarity=0.292 Sum_probs=46.1
Q ss_pred CceEEEecCCCcCCCCCCC---------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 584 NSRLILLDYDGTVMPQTSE---------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~---------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+++++|+||||...... +..+.+.+.++|++|.+ .+..++|+|||+....+..+..
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~ 223 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEW 223 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHH
Confidence 4579999999999974321 34677899999999987 4899999999999877665543
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.054 Score=53.55 Aligned_cols=47 Identities=23% Similarity=0.330 Sum_probs=36.5
Q ss_pred eEEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 586 RLILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
|++++|.||||....+ .+..+.+.+.++|++|.+ .+..++|+|..+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKK-MGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 7899999999995321 123445789999999996 4899999998763
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.11 Score=53.02 Aligned_cols=36 Identities=11% Similarity=-0.033 Sum_probs=29.0
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.+.++|+.|.+ .+..++|+||.....++.+...
T Consensus 86 ~~~g~~~~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~ 121 (219)
T TIGR00338 86 LTEGAEELVKTLKE-KGYKVAVISGGFDLFAEHVKDK 121 (219)
T ss_pred cCCCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHH
Confidence 45678889999986 4889999999988887777654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.085 Score=52.34 Aligned_cols=48 Identities=17% Similarity=0.313 Sum_probs=36.5
Q ss_pred CceEEEecCCCcCCCCCC------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC
Q 004411 584 NSRLILLDYDGTVMPQTS------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~ 632 (755)
..|++++|.||||.-... ..-.+-+.+.++|++|.+ .+..++|+|..+
T Consensus 2 ~~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 2 SMKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred CccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 368999999999865321 112355788999999997 488999999876
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=92.55 E-value=1.1 Score=51.14 Aligned_cols=107 Identities=17% Similarity=0.265 Sum_probs=63.4
Q ss_pred HHHc---CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccc
Q 004411 320 KEKF---DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNF 396 (755)
Q Consensus 320 r~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~ 396 (755)
|++| .+..++.+..++ .|=-+..+..+.++|+.-|+.+ |++...|. .+ ++.+.+.+.+ .
T Consensus 276 R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~------~~~l~~~~~~----~ 337 (468)
T PF13844_consen 276 RAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SG------EARLRRRFAA----H 337 (468)
T ss_dssp TGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--TH------HHHHHHHHHH----T
T ss_pred HHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HH------HHHHHHHHHH----c
Confidence 4455 355566666776 5667899999999999999876 76665443 11 1233333333 2
Q ss_pred CCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeeccc
Q 004411 397 GKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (755)
Q Consensus 397 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 447 (755)
|-. -..|+|.. ..+.+|..+.|+.+|||+-|..+-| +.+.+||+.+|.
T Consensus 338 Gv~-~~Ri~f~~-~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwmGV 385 (468)
T PF13844_consen 338 GVD-PDRIIFSP-VAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWMGV 385 (468)
T ss_dssp TS--GGGEEEEE----HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT-
T ss_pred CCC-hhhEEEcC-CCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHcCC
Confidence 432 23477654 6788999999999999999987766 456789999854
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.16 Score=52.95 Aligned_cols=47 Identities=19% Similarity=0.331 Sum_probs=38.1
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (755)
+.+++++|+||||.. ...+-+.+.++|++|.+ .+..++|+|..+...
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNI 53 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHHHH-CCCEEEEEeCCCCCh
Confidence 367899999999987 33467899999999997 488999988776654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.21 Score=51.08 Aligned_cols=36 Identities=11% Similarity=0.050 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.+.++|+.|.+ .+..++|+||.....++..+..
T Consensus 75 l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~ 110 (219)
T PRK09552 75 IREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQG 110 (219)
T ss_pred cCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHH
Confidence 44566788888876 5889999999999888887765
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=92.09 E-value=0.18 Score=52.50 Aligned_cols=50 Identities=24% Similarity=0.378 Sum_probs=38.6
Q ss_pred EEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEc---CCChhhHHhhhcC
Q 004411 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFSG 642 (755)
Q Consensus 588 I~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~f~~ 642 (755)
++||+||||.+. .. +-+.+.+.|+.|.+. +.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~---~~-~~~~a~e~i~~l~~~-g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLG---HK-PIPGAAEALNRLRAK-GKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcC---Cc-cCcCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHHHHHH
Confidence 579999999983 33 345889999999864 78888887 8999877666654
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=92.07 E-value=0.18 Score=51.66 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
.+.+.++|+.|.+ .+..++|+||.....++..+..
T Consensus 86 ~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~~l~~ 120 (224)
T PLN02954 86 SPGIPELVKKLRA-RGTDVYLVSGGFRQMIAPVAAI 120 (224)
T ss_pred CccHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHH
Confidence 3677788888886 4889999999999988887664
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=92.05 E-value=8 Score=42.97 Aligned_cols=72 Identities=11% Similarity=0.099 Sum_probs=48.4
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (755)
|.+ .++++..++.++++.|++++-.|- =++ .||.+.|.+ ++.+. .=.+.+.
T Consensus 264 v~l-~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~P--------------------vv~l~---~R~e~~~ 314 (365)
T TIGR03568 264 FRL-FKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGVP--------------------TINIG---TRQKGRL 314 (365)
T ss_pred EEE-ECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCCC--------------------EEeec---CCchhhh
Confidence 554 468999999999999999985442 122 699998651 23332 2222232
Q ss_pred -C--cEEeCCCCHHHHHHHHHHHhc
Q 004411 484 -G--AIRVNPWNVDAVADAMDSALQ 505 (755)
Q Consensus 484 -~--ai~VnP~d~~~~A~ai~~aL~ 505 (755)
| .+.| +.|.+++.+++.+++.
T Consensus 315 ~g~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 315 RADSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred hcCeEEEe-CCCHHHHHHHHHHHhC
Confidence 3 3447 6799999999998654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.92 E-value=0.29 Score=50.51 Aligned_cols=57 Identities=16% Similarity=0.214 Sum_probs=43.7
Q ss_pred CceEEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh---HH
Q 004411 584 NSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS---LG 637 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~---L~ 637 (755)
++-+++||+|-|++...+ ..+.+-+.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 567899999999986321 134566899999999997 499999999999765 44
Q ss_pred hhhc
Q 004411 638 NWFS 641 (755)
Q Consensus 638 ~~f~ 641 (755)
+++.
T Consensus 155 ~nL~ 158 (229)
T TIGR01675 155 DNLI 158 (229)
T ss_pred HHHH
Confidence 4443
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=91.83 E-value=0.19 Score=58.14 Aligned_cols=50 Identities=22% Similarity=0.318 Sum_probs=38.3
Q ss_pred cCceEEEecCCCcCCCCCCCC---------CCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 583 TNSRLILLDYDGTVMPQTSED---------KRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~---------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
.+.|+++||+||||....+.. ..+.+.+.+.|++|.++ +..++|+|..+-
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~-Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD-GFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC-CCEEEEEECCcc
Confidence 467999999999998643211 12457899999999974 899999997554
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=91.58 E-value=0.15 Score=54.00 Aligned_cols=54 Identities=26% Similarity=0.381 Sum_probs=40.4
Q ss_pred cCceEEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHH
Q 004411 583 TNSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLG 637 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~ 637 (755)
.+..+|++|+|+|++...+ ....+-+.+.++|+.|.+ .|..++++|+|+....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHH
Confidence 4567999999999985331 022345788999999986 48899999999855433
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=91.47 E-value=0.38 Score=48.04 Aligned_cols=35 Identities=14% Similarity=-0.114 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.++|+.|.+ .+..++|+||.....++.++..+
T Consensus 83 ~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~ 117 (201)
T TIGR01491 83 DYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEKL 117 (201)
T ss_pred ccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHh
Confidence 455678888886 48899999999988888887643
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.35 E-value=0.26 Score=52.48 Aligned_cols=36 Identities=14% Similarity=0.198 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
-+.+.++|+.|.+ .+..++|+|+.....++..+...
T Consensus 144 ~pg~~e~L~~L~~-~gi~laIvSn~~~~~~~~~L~~~ 179 (273)
T PRK13225 144 FPGVADLLAQLRS-RSLCLGILSSNSRQNIEAFLQRQ 179 (273)
T ss_pred CCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHc
Confidence 3567788888886 48899999999999888887653
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=91.31 E-value=0.4 Score=52.30 Aligned_cols=60 Identities=13% Similarity=0.150 Sum_probs=47.2
Q ss_pred CceEEEecCCCcCCCCC--CC------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC
Q 004411 584 NSRLILLDYDGTVMPQT--SE------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE 644 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~--~~------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~ 644 (755)
.+|+|++|+|+||.... .. -..+.+.+.++|++|.+ .|..++|+|.+....+...|..-|
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~~~ 69 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFERRK 69 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHhCc
Confidence 47899999999998742 11 11245789999999986 588999999999999888887633
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=91.20 E-value=0.3 Score=51.39 Aligned_cols=74 Identities=20% Similarity=0.246 Sum_probs=48.0
Q ss_pred CceEEEecCCCcCCCCCC-----------------C-------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhh
Q 004411 584 NSRLILLDYDGTVMPQTS-----------------E-------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~-----------------~-------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~ 639 (755)
.+-++++|+|+|++...+ . .+.+-+.++++++.|.+ .|..|+++|||+-..-...
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHHHH
Confidence 457999999999994211 1 34456789999999996 5999999999986544333
Q ss_pred hcCCCCceEEcCCceEEEe
Q 004411 640 FSGVEKLGLSAEHGYFTRW 658 (755)
Q Consensus 640 f~~i~~l~liaenGa~i~~ 658 (755)
...+.+.|+-.....++|.
T Consensus 179 ~~NL~kaGy~~~~~LiLR~ 197 (275)
T TIGR01680 179 EANLKKAGYHTWEKLILKD 197 (275)
T ss_pred HHHHHHcCCCCcceeeecC
Confidence 3333233332223344443
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=90.69 E-value=0.37 Score=47.75 Aligned_cols=57 Identities=19% Similarity=0.156 Sum_probs=42.9
Q ss_pred ceEEEecCCCcCCCCCC-------C----------------CCCCCHHHHHHHHHHhcCCCCcEEEEcCC-ChhhHHhhh
Q 004411 585 SRLILLDYDGTVMPQTS-------E----------------DKRPSTEVLSILNDLCNDPKNAVFIVSGR-GKDSLGNWF 640 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~-------~----------------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR-~~~~L~~~f 640 (755)
.||++||+||||....- . ...+-+.+.++|+.|.+ .+..++|+|++ ....++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 48999999999986431 0 12344789999999996 48899999998 777766665
Q ss_pred cC
Q 004411 641 SG 642 (755)
Q Consensus 641 ~~ 642 (755)
..
T Consensus 81 ~~ 82 (174)
T TIGR01685 81 GT 82 (174)
T ss_pred Hh
Confidence 43
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=90.65 E-value=0.2 Score=49.01 Aligned_cols=46 Identities=20% Similarity=0.372 Sum_probs=35.2
Q ss_pred ceEEEecCCCcCCCCCCC--------CCCCCHHHHHHHHHHhcCCCCcEEEEcCC
Q 004411 585 SRLILLDYDGTVMPQTSE--------DKRPSTEVLSILNDLCNDPKNAVFIVSGR 631 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~--------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR 631 (755)
.|+++||.||||....+. .-.+-+.+.++|++|.+ .+.+++|+|..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 378999999999874321 12345789999999996 48899999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=90.65 E-value=10 Score=41.98 Aligned_cols=136 Identities=15% Similarity=0.214 Sum_probs=83.9
Q ss_pred ceEEEEecccccc-CChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004411 326 KIVILGVDDMDLF-KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (755)
Q Consensus 326 ~~vil~VdRld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV 404 (755)
+-+++..=|-... +++...+.|+.++++++|+.. +| .|.--+ +.. ++++ +.+++.. ..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi---yp~H~~-~~v-------~e~~---~~~L~~~--~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI---YPVHPR-PRV-------RELV---LKRLKNV--ERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE---EeCCCC-hhh-------hHHH---HHHhCCC--CcE
Confidence 4566667776655 999999999999999998865 32 232111 222 2222 1122321 136
Q ss_pred EEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-
Q 004411 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS- 483 (755)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~- 483 (755)
+++ .++...+...|...|-+.+--| |=..-||-.-+. -++++=+.+.=.+.+.
T Consensus 265 ~li-~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~--------------------Pvl~lR~~TERPE~v~a 318 (383)
T COG0381 265 KLI-DPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK--------------------PVLVLRDTTERPEGVEA 318 (383)
T ss_pred EEe-CCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC--------------------cEEeeccCCCCccceec
Confidence 655 5899999999999996655444 122234444432 1455544454445553
Q ss_pred C-cEEeCCCCHHHHHHHHHHHhcCCH
Q 004411 484 G-AIRVNPWNVDAVADAMDSALQMEN 508 (755)
Q Consensus 484 ~-ai~VnP~d~~~~A~ai~~aL~m~~ 508 (755)
| .++|+. |.+.+.+++.++++++.
T Consensus 319 gt~~lvg~-~~~~i~~~~~~ll~~~~ 343 (383)
T COG0381 319 GTNILVGT-DEENILDAATELLEDEE 343 (383)
T ss_pred CceEEeCc-cHHHHHHHHHHHhhChH
Confidence 4 355665 78999999999999764
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=90.60 E-value=0.32 Score=45.69 Aligned_cols=68 Identities=13% Similarity=0.132 Sum_probs=40.1
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHH-----HHhhhCCEEEEeCHHHHHHHHH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-----KSLLNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il-----~~ll~~Dligf~t~~~~~~Fl~ 263 (755)
-|+|++|+++..+++.+++++ .++|+.+.+|..+.... .++...++ ..+-.||.|...+...++.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 499999998877777777744 48999999997543211 12222222 3345689998888877777664
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.44 E-value=0.27 Score=49.50 Aligned_cols=34 Identities=18% Similarity=0.119 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.++|+.|.+ . ..++|+||.....++..+..+
T Consensus 71 pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 71 PGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHc
Confidence 556788888886 3 789999999999988887653
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.44 E-value=0.64 Score=50.71 Aligned_cols=36 Identities=14% Similarity=-0.112 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.+.++|+.|.+ .+..++|+||......+.....
T Consensus 182 l~pGa~elL~~Lk~-~G~~~aIvSgg~~~~~~~l~~~ 217 (322)
T PRK11133 182 LMPGLTELVLKLQA-LGWKVAIASGGFTYFADYLRDK 217 (322)
T ss_pred CChhHHHHHHHHHH-cCCEEEEEECCcchhHHHHHHH
Confidence 45667778888886 4889999999887665555543
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.36 E-value=0.3 Score=53.80 Aligned_cols=47 Identities=17% Similarity=0.344 Sum_probs=38.1
Q ss_pred CceEEEecCCCcCCCCCC--------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCC
Q 004411 584 NSRLILLDYDGTVMPQTS--------EDKRPSTEVLSILNDLCNDPKNAVFIVSGR 631 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~--------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR 631 (755)
++|++++|.||||....+ ....+.+.+.+.|+.|.+ .+..++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 468999999999998532 234667889999999985 58899999985
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=90.18 E-value=0.39 Score=46.89 Aligned_cols=36 Identities=14% Similarity=-0.044 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.+.+.++|+.+.+ .+..++|+||.....++.++..+
T Consensus 75 ~~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~ 110 (177)
T TIGR01488 75 RPGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKL 110 (177)
T ss_pred CcCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHc
Confidence 3567777888775 47889999999888888877643
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=90.00 E-value=0.49 Score=45.35 Aligned_cols=58 Identities=16% Similarity=0.194 Sum_probs=44.2
Q ss_pred CceEEEecCCCcCCCCC--C--C--CC-----------------CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhh
Q 004411 584 NSRLILLDYDGTVMPQT--S--E--DK-----------------RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~--~--~--~~-----------------~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f 640 (755)
+++++++|+||||+... + . +. .+-+.+.+.|+.|.+ +..++|+|+.....++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 36789999999999752 1 0 00 224678899999984 6889999999999988877
Q ss_pred cCC
Q 004411 641 SGV 643 (755)
Q Consensus 641 ~~i 643 (755)
..+
T Consensus 79 ~~l 81 (148)
T smart00577 79 DLL 81 (148)
T ss_pred HHh
Confidence 654
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.55 E-value=11 Score=42.19 Aligned_cols=71 Identities=17% Similarity=0.109 Sum_probs=49.8
Q ss_pred hHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc----C----CcE
Q 004411 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL----S----GAI 486 (755)
Q Consensus 415 el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l----~----~ai 486 (755)
++-.+-+.|...|+||++|+.|.+|-|..+.|. |-|.+..+|..-.+ . -||
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGi---------------------PSvtTNlSGFGcfMeehi~d~~ayGI 551 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGI---------------------PSVTTNLSGFGCFMEEHIEDPQAYGI 551 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEecc---------------------ccccccccchhhhHHHHhcCchhceE
Confidence 667788999999999999999999999999865 44555555543222 2 144
Q ss_pred -EeC-----C-CCHHHHHHHHHHHhcC
Q 004411 487 -RVN-----P-WNVDAVADAMDSALQM 506 (755)
Q Consensus 487 -~Vn-----P-~d~~~~A~ai~~aL~m 506 (755)
+|+ | .+++++++-|..-...
T Consensus 552 YIvDRRfks~deSv~qL~~~m~~F~~q 578 (692)
T KOG3742|consen 552 YIVDRRFKSPDESVQQLASFMYEFCKQ 578 (692)
T ss_pred EEEecccCChhhHHHHHHHHHHHHHHH
Confidence 333 2 3467778777776653
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=88.32 E-value=0.37 Score=47.52 Aligned_cols=58 Identities=16% Similarity=0.116 Sum_probs=42.2
Q ss_pred ceEEEecCCCcCCCCC----CCC---CCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 585 SRLILLDYDGTVMPQT----SED---KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~----~~~---~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.|+++||.||||++-. +.. +..+.+=...++.|.+ .+..++|+|+++...++..+..+
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~l 71 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEEL 71 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHHC
Confidence 7999999999999842 111 1222333445666765 48899999999999999988765
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=88.22 E-value=0.87 Score=44.80 Aligned_cols=35 Identities=6% Similarity=0.031 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
.+.+.++|+.|.+ .+..++|+|+.....++..+..
T Consensus 74 ~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~ 108 (188)
T TIGR01489 74 DPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEG 108 (188)
T ss_pred CccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHH
Confidence 3456667777764 3677888888877776666553
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=87.96 E-value=0.95 Score=46.15 Aligned_cols=37 Identities=8% Similarity=0.062 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.+.++|+.|.+ .+..++|+||.....++.++..+
T Consensus 71 l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 71 IREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred ccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 34566678888876 48899999999998888877654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.18 E-value=0.8 Score=46.82 Aligned_cols=33 Identities=12% Similarity=-0.107 Sum_probs=25.0
Q ss_pred HHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 609 EVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 609 ~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
.+.++|+.|++ .+..++|+||.....++..+..
T Consensus 96 g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~ 128 (222)
T PRK10826 96 GVREALALCKA-QGLKIGLASASPLHMLEAVLTM 128 (222)
T ss_pred CHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHHh
Confidence 35667777775 4788999999988887777754
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.93 E-value=0.72 Score=48.83 Aligned_cols=46 Identities=15% Similarity=0.219 Sum_probs=36.4
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChh
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKD 634 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~ 634 (755)
+.+.+++|+||||.. ...+-+...+.|++|.+. +.+++++|-++..
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L~~~-g~~~iflTNn~~~ 52 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRLKAA-GKPVIFLTNNSTR 52 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHHHHc-CCeEEEEeCCCCC
Confidence 356799999999997 344557999999999974 8889888766543
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=86.00 E-value=9.1 Score=41.79 Aligned_cols=135 Identities=16% Similarity=0.161 Sum_probs=83.7
Q ss_pred ccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCC
Q 004411 333 DDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS 412 (755)
Q Consensus 333 dRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~ 412 (755)
-.-|++-+....|+++.+... .+ +.++ ..-+ -+...+++.+++.+.+.++ ||.. .+..+++.++
T Consensus 192 NSgd~sNnHieaL~~L~~~~~--~~----~kIi--vPLs--Yg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mp 255 (360)
T PF07429_consen 192 NSGDPSNNHIEALEALKQQFG--DD----VKII--VPLS--YGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMP 255 (360)
T ss_pred CCCCCCccHHHHHHHHHHhcC--CC----eEEE--EECC--CCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCC
Confidence 456788878777766665321 12 2222 2111 2222456777777777665 4432 3666788999
Q ss_pred hhhHHHHHHhCcEEEEcCCC-cCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-CCcEEe--
Q 004411 413 TQDKVPYYAIAECCVVNCVR-DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRV-- 488 (755)
Q Consensus 413 ~~el~aly~~ADv~vvtS~~-EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~V-- 488 (755)
.+|+.++++.+|+.++...| .|||...+ .+.+ +.++++|+-.-....+ ..++.|
T Consensus 256 f~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~---------------------G~~v~L~~~np~~~~l~~~~ipVlf 313 (360)
T PF07429_consen 256 FDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL---------------------GKKVFLSRDNPFWQDLKEQGIPVLF 313 (360)
T ss_pred HHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc---------------------CCeEEEecCChHHHHHHhCCCeEEe
Confidence 99999999999999999986 88887643 1222 2478888877666666 345433
Q ss_pred --CCCCHHHHHHHHHHHhc
Q 004411 489 --NPWNVDAVADAMDSALQ 505 (755)
Q Consensus 489 --nP~d~~~~A~ai~~aL~ 505 (755)
+.-|...+++|=+++..
T Consensus 314 ~~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 314 YGDELDEALVREAQRQLAN 332 (360)
T ss_pred ccccCCHHHHHHHHHHHhh
Confidence 44455555555444433
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=85.94 E-value=0.12 Score=53.55 Aligned_cols=76 Identities=17% Similarity=0.218 Sum_probs=51.2
Q ss_pred cCceEEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhh
Q 004411 583 TNSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~ 639 (755)
-+...|++|+|+|++...+ ....+-+.++++++.+.+ .|..|+++|||+...-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHH
Confidence 4678999999999985210 012334568899999987 4999999999998855544
Q ss_pred hcCCCCceEEcCCceEEEec
Q 004411 640 FSGVEKLGLSAEHGYFTRWS 659 (755)
Q Consensus 640 f~~i~~l~liaenGa~i~~~ 659 (755)
...+...|+-.-.+.+++..
T Consensus 149 ~~nL~~~G~~~~~~l~lr~~ 168 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRPD 168 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEEE
T ss_pred HHHHHHcCCCccchhccccc
Confidence 44443344434356666654
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=85.33 E-value=8.6 Score=42.84 Aligned_cols=96 Identities=11% Similarity=0.061 Sum_probs=58.6
Q ss_pred ecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcc----ccc
Q 004411 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS----PSL 482 (755)
Q Consensus 407 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l 482 (755)
+.+.+++. .++..||++|.. -|.| +..|++++|. |+|+.-..+-. ..+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~h---gG~~-t~~Eal~~G~---------------------P~v~~p~~~dq~~~a~~l 330 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITH---GGMN-STMEALFNGV---------------------PMVAVPQGADQPMTARRI 330 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEEC---CCch-HHHHHHHhCC---------------------CEEecCCcccHHHHHHHH
Confidence 34667764 568899988854 4666 5689999975 44443332211 112
Q ss_pred ---CCcEEeCC--CCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHH
Q 004411 483 ---SGAIRVNP--WNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAK 532 (755)
Q Consensus 483 ---~~ai~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~ 532 (755)
..|+.++. .+.++++++|.++|..+ +.+.+.+++.+.+.. ......++
T Consensus 331 ~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~ 384 (392)
T TIGR01426 331 AELGLGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAAD 384 (392)
T ss_pred HHCCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHH
Confidence 12566654 46799999999999864 344455555555544 34444444
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.07 E-value=0.96 Score=46.05 Aligned_cols=36 Identities=11% Similarity=0.109 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
-+.+.++|+.|.+ .+..++|+||.....++.++...
T Consensus 95 ~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~ 130 (226)
T PRK13222 95 YPGVKETLAALKA-AGYPLAVVTNKPTPFVAPLLEAL 130 (226)
T ss_pred CCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHc
Confidence 3455667777775 47889999999998888887643
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=84.80 E-value=70 Score=35.51 Aligned_cols=73 Identities=14% Similarity=0.192 Sum_probs=47.3
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCc----c
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC----S 479 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----~ 479 (755)
|. +.+.++.. +++..||++| .+-|+| +..|++++|. |+|+--+.+- +
T Consensus 290 v~-~~~~~p~~---~ll~~~d~~I---~hgG~~-t~~eal~~Gv---------------------P~v~~P~~~dQ~~~a 340 (401)
T cd03784 290 VR-VVDFVPHD---WLLPRCAAVV---HHGGAG-TTAAALRAGV---------------------PQLVVPFFGDQPFWA 340 (401)
T ss_pred eE-EeCCCCHH---HHhhhhheee---ecCCch-hHHHHHHcCC---------------------CEEeeCCCCCcHHHH
Confidence 44 44566654 5678899999 456654 5579999975 4444334331 2
Q ss_pred ccc-C-C-cEEeCCC--CHHHHHHHHHHHhc
Q 004411 480 PSL-S-G-AIRVNPW--NVDAVADAMDSALQ 505 (755)
Q Consensus 480 ~~l-~-~-ai~VnP~--d~~~~A~ai~~aL~ 505 (755)
..+ . | |+.+++. +.+++++++.++|+
T Consensus 341 ~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 341 ARVAELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HHHHHCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 222 1 3 5666654 68999999999998
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=84.38 E-value=4.1 Score=43.45 Aligned_cols=92 Identities=9% Similarity=0.134 Sum_probs=58.5
Q ss_pred CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004411 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV 404 (755)
.+++++..|-.|+.+.....++|+.++ .++++ +..|.++.. +.++ ++++++.. .+ .|
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~~----~l~~~~~~----~~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNLD----ELKKFAKE----YP-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCHH----HHHHHHHh----CC-----CE
Confidence 367999999999987666777777653 23333 333443331 2222 34444332 11 24
Q ss_pred EEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeeccc
Q 004411 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (755)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 447 (755)
.++ + ..+++..+++.||+++.. -|.+..|++++|.
T Consensus 227 ~~~-~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 227 ILF-I--DVENMAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred EEE-e--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 433 2 357899999999999884 3578999999975
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=84.29 E-value=1.7 Score=47.48 Aligned_cols=48 Identities=19% Similarity=0.277 Sum_probs=33.2
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcC---CCCcEEEE---cCCChhhHHh
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCND---PKNAVFIV---SGRGKDSLGN 638 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d---~~~~V~Iv---SGR~~~~L~~ 638 (755)
.++||+||||.. ...+-+...++|+.|... -+..++++ ||++.....+
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~ 55 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAE 55 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHH
Confidence 589999999997 234468899999999863 05556555 4666665333
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=84.27 E-value=1.4 Score=42.71 Aligned_cols=55 Identities=11% Similarity=0.311 Sum_probs=41.3
Q ss_pred EEEecCCCcCCCCC------C--CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChh---hHHhhhcC
Q 004411 587 LILLDYDGTVMPQT------S--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKD---SLGNWFSG 642 (755)
Q Consensus 587 lI~lD~DGTL~~~~------~--~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~---~L~~~f~~ 642 (755)
++++|+|||++... + ......+.+.++.+++.+ .|..++-+|+|+.. ..+.|+..
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~~Tr~~L~~ 66 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQANRTRSWLAQ 66 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHHHHHHHHHH
Confidence 47899999999752 1 112455788899999997 48999999999965 45666653
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.11 E-value=1.4 Score=45.35 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=27.5
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
-+.+.++|+.|.+. +..++++|+.+...++..+..
T Consensus 88 ~pGv~~~l~~L~~~-~i~~avaS~s~~~~~~~~L~~ 122 (221)
T COG0637 88 IPGVVELLEQLKAR-GIPLAVASSSPRRAAERVLAR 122 (221)
T ss_pred CccHHHHHHHHHhc-CCcEEEecCChHHHHHHHHHH
Confidence 35677888888864 688999999998887777753
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=82.82 E-value=0.99 Score=43.57 Aligned_cols=56 Identities=18% Similarity=0.322 Sum_probs=37.6
Q ss_pred eEEEecCCCcCCCCCCCCC----------------CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 586 RLILLDYDGTVMPQTSEDK----------------RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~~----------------~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
|++++|+||||+....... ..-|.+.+.|+.|+. ...|+|.|..+....+.....+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 6899999999996432110 123577788888875 5789999999988777776654
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.57 E-value=1.2 Score=45.58 Aligned_cols=36 Identities=17% Similarity=0.067 Sum_probs=28.1
Q ss_pred CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 605 ~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
...+...++++.|.+ .|.+|+|+||-.....++...
T Consensus 77 ~l~~ga~elv~~lk~-~G~~v~iiSgg~~~lv~~ia~ 112 (212)
T COG0560 77 RLTPGAEELVAALKA-AGAKVVIISGGFTFLVEPIAE 112 (212)
T ss_pred cCCccHHHHHHHHHH-CCCEEEEEcCChHHHHHHHHH
Confidence 345678888899987 599999999998876665554
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=82.20 E-value=3.8 Score=46.19 Aligned_cols=80 Identities=13% Similarity=0.171 Sum_probs=58.5
Q ss_pred ChHHHHHHhhccCceEEEecCCCcCCCCC----C------CCC---CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHh
Q 004411 572 GMHHIASAYNKTNSRLILLDYDGTVMPQT----S------EDK---RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGN 638 (755)
Q Consensus 572 ~~~~i~~~y~~s~~rlI~lD~DGTL~~~~----~------~~~---~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~ 638 (755)
.+..++.+-.....|.++||+|+||..-. . .+. .+-.++.+.+..|.+ .|...+|+|-+.....++
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~k-qGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKK-QGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHh-ccEEEEEecCCchhhHHH
Confidence 44566777777788999999999998522 0 111 233567778888886 588889999999999999
Q ss_pred hhcCCCCceEEcCC
Q 004411 639 WFSGVEKLGLSAEH 652 (755)
Q Consensus 639 ~f~~i~~l~liaen 652 (755)
.|..-|++.|=-|+
T Consensus 288 vF~khp~MiLkeed 301 (574)
T COG3882 288 VFRKHPDMILKEED 301 (574)
T ss_pred HHhhCCCeEeeHhh
Confidence 99877777554333
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=81.94 E-value=1.6 Score=48.66 Aligned_cols=35 Identities=29% Similarity=0.289 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.++|+.|.+ .+..++|+|+++...++..+..+
T Consensus 219 pGa~ElL~~Lk~-~GiklaIaSn~~~~~~~~~L~~l 253 (381)
T PLN02575 219 TGSQEFVNVLMN-YKIPMALVSTRPRKTLENAIGSI 253 (381)
T ss_pred cCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHc
Confidence 355567888876 48899999999999888877643
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=81.94 E-value=0.79 Score=49.15 Aligned_cols=27 Identities=26% Similarity=0.396 Sum_probs=21.1
Q ss_pred ChHHHHHHhhccCceEEEecCCCcCCC
Q 004411 572 GMHHIASAYNKTNSRLILLDYDGTVMP 598 (755)
Q Consensus 572 ~~~~i~~~y~~s~~rlI~lD~DGTL~~ 598 (755)
+...+.++-...+.++|+||+||||++
T Consensus 27 ~~~~~~~~~~~~~~k~VIFDlDGTLvD 53 (286)
T PLN02779 27 STARVASASASALPEALLFDCDGVLVE 53 (286)
T ss_pred hhhhhhhhccccCCcEEEEeCceeEEc
Confidence 345555665666789999999999998
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=81.39 E-value=1.7 Score=48.55 Aligned_cols=33 Identities=9% Similarity=0.090 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+.+.++|+.|.+ .+..++|+|+.+...+...+.
T Consensus 96 pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 96 PGANRLIKHLKS-HGVPMALASNSPRANIEAKIS 128 (382)
T ss_pred cCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHH
Confidence 345568888886 488999999999888776654
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=80.96 E-value=0.63 Score=46.59 Aligned_cols=29 Identities=17% Similarity=0.367 Sum_probs=20.4
Q ss_pred CCCHHHHHHHHHHhcCCCCcEEEEcCCChh
Q 004411 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKD 634 (755)
Q Consensus 605 ~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~ 634 (755)
.|-+.+.++|++|.+ .+..++++|+|+..
T Consensus 73 ~p~~gA~e~l~~L~~-~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRD-KGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHT-STTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHH-cCCcEEEEEecCcc
Confidence 355788999999996 46678888888754
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=80.38 E-value=2.3 Score=41.91 Aligned_cols=57 Identities=19% Similarity=0.208 Sum_probs=34.3
Q ss_pred ceEEEecCCCcCCCCCCC------------C----------CCCCHHHHHHHHHHhcCCCCcEEEEcCCC-hhhHHhhhc
Q 004411 585 SRLILLDYDGTVMPQTSE------------D----------KRPSTEVLSILNDLCNDPKNAVFIVSGRG-KDSLGNWFS 641 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~------------~----------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~-~~~L~~~f~ 641 (755)
.|||+||+|+||-+.--. . -..-+++.++|+.|.+ .+..+++||=-. .+-.++.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 489999999999974310 0 0123688899999997 589999999544 445555554
Q ss_pred C
Q 004411 642 G 642 (755)
Q Consensus 642 ~ 642 (755)
.
T Consensus 82 ~ 82 (169)
T PF12689_consen 82 L 82 (169)
T ss_dssp H
T ss_pred h
Confidence 3
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 755 | ||||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 6e-53 | ||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 6e-53 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 4e-51 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 2e-13 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 2e-13 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 5e-12 |
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 755 | |||
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 0.0 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 0.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 2e-46 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-07 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 2e-06 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 1e-04 |
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 596 bits (1539), Expect = 0.0
Identities = 131/494 (26%), Positives = 225/494 (45%), Gaps = 38/494 (7%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQ 111
R ++V+N++ + + L + + ++ G ++
Sbjct: 3 RLVVVSNRIAPPDEHAASAGG---------LAVGILGALK-AAGGLWFGWSGET--GNED 50
Query: 112 EEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQA 171
+ + + L +YY+ F LWP FHY L L +F R W
Sbjct: 51 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDG 105
Query: 172 YLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIY 231
YL N + ADK++ ++ D D +WIHDYHL+ LRKR ++GFFLH PFP+ EI+
Sbjct: 106 YLRVNALLADKLLPLLQDD-DIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 164
Query: 232 RTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291
LP D +L+ L + DL+GF T + FL S + + S + + +G+
Sbjct: 165 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 221
Query: 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351
++ P+GI + + + K+ +LK + I V+ +D KG+ +FLA L
Sbjct: 222 EVYPIGIEPKEIAKQAAGPLP-PKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 280
Query: 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411
LE++P GK+ QI +R + QD+ A IN +G+ G+ P+ + +
Sbjct: 281 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 340
Query: 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471
+ + + ++ +V +RDGMNLV +Y ++ P V++
Sbjct: 341 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQD----------------PANPGVLV 384
Query: 472 VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531
+S+F G + L+ A+ VNP++ D VA A+D AL M E+I RH + I +D+ +W
Sbjct: 385 LSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQ 444
Query: 532 KSIDQDLERACRDH 545
+ DL++
Sbjct: 445 ECFISDLKQIVPRS 458
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 544 bits (1404), Expect = 0.0
Identities = 83/505 (16%), Positives = 174/505 (34%), Gaps = 42/505 (8%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVE---IGV 108
+ + + + + + + + + ++ S + E
Sbjct: 4 EIFLASKRAAITYDTDPATGEPRAWLAPGGT-GNVVAEQAGVLNISWIASADSEDDRRAS 62
Query: 109 DDQEEVSTILLEKFKCVPTFL---PADVHKKYYHGFCKHYLWPLFHYMLPLTASHG-ARF 164
+ T+ L + + L V + + + +W +Y
Sbjct: 63 ALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSFGSD 122
Query: 165 DRGEWQAYLSANKVFADKVMEVINPDE-DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHS 223
R W + + FAD +++ +HDY L+ +P+ LR++ + F+H
Sbjct: 123 AREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHI 182
Query: 224 PFPSSEIYRTLP--VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIG 281
P+PS++ +R LP +R IL +L + IGF + R+FL S + +L + R +
Sbjct: 183 PWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLP-DARIDREAMT 241
Query: 282 LDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341
+++ G ++ +P+G + Q + ++E DG +++ D K
Sbjct: 242 VEWRGHRTRLRTMPLGYSPLTLDG-----RNPQLPEGIEEWADGHRLVVHSGRTDPIKNA 296
Query: 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401
A +L K ++ NP R D + E N G
Sbjct: 297 ERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELG---- 350
Query: 402 EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEK 461
V I + + A+ + N DG NL ++ +
Sbjct: 351 SDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVN--------------- 395
Query: 462 NPPQKKSVIIVSEFIGCSPSLSGAIR-VNPWNVDAVADAMDSALQMENQEKILRHEKHYK 520
++ + +I+SE G + L R VNP+++ A+A+ +AL +++ +
Sbjct: 396 ---ERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRD 452
Query: 521 YISSHDVAYWAKSIDQDLERACRDH 545
+ W ++ L
Sbjct: 453 AARPWTLEAWVQAQLDGLAADHAAR 477
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 2e-46
Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 11/164 (6%)
Query: 587 LILLDYDGTVMP--QTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE 644
LI LDYDGT++P E+ +LS+++DL + +IV+GR + + + ++
Sbjct: 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDL--KERFDTYIVTGRSPEEISRFL-PLD 59
Query: 645 KLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVW 704
+ + HG ++ + + S R + + + G I K A+++
Sbjct: 60 -INMICYHGACSKINGQIVYNNGS-DRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLY 117
Query: 705 HHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
H +L +E + V G+ I+E++
Sbjct: 118 HLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVP 157
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 3e-07
Identities = 81/576 (14%), Positives = 169/576 (29%), Gaps = 154/576 (26%)
Query: 169 WQAYLSANKVFADKVMEVINPDEDYVWIHD-YHLMVL-PSFLRKRF-HRVKVGFFLHSPF 225
W ++ V EV+ + Y ++ PS + + + + + + F
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRIN--YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF 126
Query: 226 PSSEIYRTLPVRD--EILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD 283
+ R P + L L + + +LG
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNVLIDG-------------VLG------------- 160
Query: 284 YFGRTV-------SIKIL---PVGIH---MGQFESIMSLDVTGQKVKELKEKFDGKIVIL 330
G+T S K+ I + S ++ + +++L + D
Sbjct: 161 -SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL---EMLQKLLYQIDPNWTSR 216
Query: 331 GVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVL--VQITNPAR-----------SSGKD 377
++ I + +LL+ P +VL VQ + K
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276
Query: 378 VQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS--------TQDKVPYYAIAECCVVN 429
V D LS I+L+ P E S +P E N
Sbjct: 277 VTDFLSAATT--THISLDHHSMTLTP----DEVKSLLLKYLDCRPQDLP----REVLTTN 326
Query: 430 ---------CVRDGMNLV-PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479
+RDG+ +K+ + + +++ +L + P + + + F S
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL--NVLEPAEYRKM-----FDRLS 379
Query: 480 --PSLSGAIRVN-P-------WNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAY 529
P + P W +D M ++ + + K S +
Sbjct: 380 VFPP-----SAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI-SIPSIYL 433
Query: 530 WAK---SIDQDLERACRDHL-FKRCWGVGLGLGFRIVALGPE------FRKLGMHHIASA 579
K + L R+ DH + + L P + +G HH+ +
Sbjct: 434 ELKVKLENEYALHRSIVDHYNIPKTFDSD--------DLIPPYLDQYFYSHIG-HHLKNI 484
Query: 580 --YNKTNS-RLILLDY---DGTVMPQTSEDKRPSTEVLSILNDLC--------NDPKNAV 625
+ R++ LD+ + + ++ + +L+ L L NDPK
Sbjct: 485 EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGS-ILNTLQQLKFYKPYICDNDPKYER 543
Query: 626 FI------VSGRGKDSLGNWFSGVEKLGLSAEHGYF 655
+ + ++ + + ++ + ++ L AE
Sbjct: 544 LVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI 579
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* Length = 262 | Back alignment and structure |
|---|
Score = 49.2 bits (116), Expect = 2e-06
Identities = 24/167 (14%), Positives = 48/167 (28%), Gaps = 16/167 (9%)
Query: 573 MHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632
M A A + L L D DGT+ P ++ EV + L L + + + +V G
Sbjct: 1 MAVTAQAARRKERVLCLFDVDGTLTP---ARQKIDPEVAAFLQKLRS--RVQIGVVGGSD 55
Query: 633 KDSLGNWFSGVEKLGLSAEHGYFTR----WSKNSAWEICSLTRDFD-------WKEIAEP 681
+ +++ ++ + + ++
Sbjct: 56 YCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSY 115
Query: 682 VMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENV 728
+ L G+FIE + + LD E +
Sbjct: 116 MALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKI 162
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A Length = 246 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 1e-04
Identities = 28/186 (15%), Positives = 48/186 (25%), Gaps = 26/186 (13%)
Query: 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG- 642
L L D DGT+ T+ ++ + E+ L L K + +V G + +
Sbjct: 5 GPALCLFDVDGTL---TAPRQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGND 59
Query: 643 --------VEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSF 694
+ GL A +N + + K+ G+F
Sbjct: 60 VVEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTF 119
Query: 695 IEDKETAIVWHHQHADPHFGSCQAKELLDH------------LENVLANEPVVVKRGQHI 742
IE + + LD + GQ
Sbjct: 120 IEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQIS 179
Query: 743 VEVKPQ 748
+V P
Sbjct: 180 FDVFPD 185
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 755 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.94 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.92 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.91 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.91 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.91 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.91 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.91 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.9 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.9 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.9 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.89 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.89 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.89 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.85 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.83 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.83 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.76 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.73 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.72 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.72 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.69 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.66 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.63 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.61 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.58 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.57 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.54 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.54 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.48 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.48 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.43 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.42 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.4 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.35 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.35 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.32 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.31 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.29 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.29 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.28 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.27 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.27 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.22 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.21 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.18 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.17 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.13 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.12 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.1 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.05 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.01 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.99 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.88 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.7 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.68 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.62 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.34 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.15 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.12 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.03 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.97 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 97.88 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 97.77 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.73 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.69 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.64 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 97.61 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.49 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 97.4 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.37 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.29 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 97.28 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 97.17 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 97.14 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 97.06 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 96.98 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 96.97 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.9 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.88 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 96.87 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.86 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.8 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.74 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.68 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 96.6 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.54 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 96.46 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 96.41 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 96.36 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 96.3 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 96.13 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 96.08 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 96.06 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 96.04 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 95.91 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.83 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 95.8 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 95.76 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 95.72 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 95.7 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 95.48 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 95.45 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 95.44 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 95.22 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.18 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.02 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 94.3 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 94.19 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 94.14 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 93.91 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 93.56 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 93.28 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 93.25 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 93.23 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 93.06 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 93.0 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 92.89 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 92.88 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 92.73 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 92.56 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 92.31 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 92.31 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 92.2 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 92.18 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 92.03 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 91.88 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 91.85 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 91.76 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 91.16 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 91.1 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 90.38 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 90.04 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 89.76 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 89.46 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 89.09 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 89.04 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 88.9 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 88.74 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 88.03 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 87.94 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 87.52 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 87.46 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 87.35 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 87.19 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 87.1 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 86.7 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 86.15 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 85.81 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 85.74 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 85.62 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 85.61 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 85.49 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 85.49 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 85.37 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 85.1 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 85.03 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 84.72 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 84.54 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 84.49 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 84.41 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 84.16 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 83.86 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 83.46 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 83.22 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 83.01 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 82.98 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 82.6 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 81.91 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 81.62 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 81.26 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 81.16 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 80.96 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 80.93 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 80.8 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-106 Score=912.45 Aligned_cols=456 Identities=17% Similarity=0.270 Sum_probs=404.5
Q ss_pred CCcEEEEEcCCccceeEeCCCCce---EEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCcchhhHHH---------h
Q 004411 50 CQRRIIVANQLPVKAYYEKDSNKW---GFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVST---------I 117 (755)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~---~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~---------~ 117 (755)
..++||||||||+.+++++++|+| .++.++|||+++|.+.+ +++||||++.+.+ ++.+.+ .
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~----~~~Wvgw~~~~~~---~~~~~~~~~~~~~~~~ 74 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL----NISWIASADSEDD---RRASALNPDGVTMELH 74 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH----TCCEEEECCSHHH---HHHHHHCTTCEEEECT
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc----CCEEEecCCCccc---hhhhhccccccccccc
Confidence 468999999999999987344566 67778999999998754 7899999886432 111111 1
Q ss_pred hhcCeeEEEEeCChHhHhhHhhccccccccccccccCcC--CCCCCcccChhhHHHHHHHHHHHHHHHHHHhCC-CCCEE
Q 004411 118 LLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPL--TASHGARFDRGEWQAYLSANKVFADKVMEVINP-DEDYV 194 (755)
Q Consensus 118 ~~~~~~~~pv~l~~~~~~~~y~gf~~~~Lwpl~H~~~~~--~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~~DiV 194 (755)
..++|+|+||+|+++++++||+||||++|||+|||+.+. .|+. .+|+++.|++|++||++||++|++.+++ ++|+|
T Consensus 75 ~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~-~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~V 153 (496)
T 3t5t_A 75 SGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF-GSDAREGWADFGRFTRDFADAILKSSAQSADPVY 153 (496)
T ss_dssp TSCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCB-CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEE
T ss_pred cCCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCCCcc-chhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEE
Confidence 246899999999999999999999999999999998533 2332 3566789999999999999999999952 46999
Q ss_pred EEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCC--ChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHh-Cc
Q 004411 195 WIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP--VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRML-GL 271 (755)
Q Consensus 195 wvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp--~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~l-g~ 271 (755)
||||||||+||+|||+++|+++||||||||||++|+|++|| ||++||++||+||+|||||++|++||++||+|++ |+
T Consensus 154 wVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~ 233 (496)
T 3t5t_A 154 LVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDA 233 (496)
T ss_dssp EEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTC
T ss_pred EEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999 7999999999999999999999999999999999 88
Q ss_pred cccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHH
Q 004411 272 NYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351 (755)
Q Consensus 272 ~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~l 351 (755)
++....+ .+.++|++++|.++|+|||++.|.+... ++ .+++|++++++++||+|||||+.|||..+|+|| +|
T Consensus 234 ~~~~~~~--~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~l 305 (496)
T 3t5t_A 234 RIDREAM--TVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VL 305 (496)
T ss_dssp EEETTTT--EEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HH
T ss_pred cccccCC--eEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HH
Confidence 7665554 5889999999999999999999987543 11 156788888999999999999999999999999 99
Q ss_pred HHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCC
Q 004411 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV 431 (755)
Q Consensus 352 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~ 431 (755)
++++|+++ +++|||||.|+|+++++|+++++++++++++||.+||.. ||+|+ +.++.+++.++|++|||||+||+
T Consensus 306 l~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~Sl 380 (496)
T 3t5t_A 306 AARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNST 380 (496)
T ss_dssp HHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCS
T ss_pred HHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEECcc
Confidence 99999999 999999999999999999999999999999999999875 78877 47899999999999999999999
Q ss_pred CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-CCcEEeCCCCHHHHHHHHHHHhcCCHHH
Q 004411 432 RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQE 510 (755)
Q Consensus 432 ~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~VnP~d~~~~A~ai~~aL~m~~~e 510 (755)
+||||||++|||||+. ++||+|+|+|+|+++++ .+|++|||||++++|+||.++|+|+++|
T Consensus 381 rEGfgLv~~EamA~~~------------------~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~e 442 (496)
T 3t5t_A 381 VDGQNLSTFEAPLVNE------------------RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQ 442 (496)
T ss_dssp SBSCCSHHHHHHHHCS------------------SCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHH
T ss_pred cccCChhHHHHHHhCC------------------CCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHH
Confidence 9999999999999963 35899999999999999 4799999999999999999999999999
Q ss_pred HHHHHHHHhhHhhhcCHHHHHHHHHHHHHHHHHh
Q 004411 511 KILRHEKHYKYISSHDVAYWAKSIDQDLERACRD 544 (755)
Q Consensus 511 r~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 544 (755)
|+.|+++++++|++||+.+|+++|+++|......
T Consensus 443 r~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 443 RAEAAARRRDAARPWTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHhhcccc
Confidence 9999999999999999999999999999887544
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-92 Score=806.21 Aligned_cols=454 Identities=28% Similarity=0.525 Sum_probs=411.4
Q ss_pred CCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCcchhhHHHhhhcCeeEEEEeC
Q 004411 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFL 129 (755)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 129 (755)
++|+||||||||+... + +.++|||+++|.+.+. ..+++||||+|.. ++ +++.+.+.+.++|+|+||||
T Consensus 1 ~~~livvsnr~p~~~~-------~--~~~~ggl~~~l~~~~~-~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l 68 (482)
T 1uqt_A 1 MSRLVVVSNRIAPPDE-------H--AASAGGLAVGILGALK-AAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNL 68 (482)
T ss_dssp -CCEEEEEEECCCCC-------------CCCHHHHHHHHHHH-HHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCCCCCCC-------C--CcCCCcHHHHHHHHHh-hCCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEEC
Confidence 3689999999999721 1 2467899999987664 4799999999865 32 22333334457899999999
Q ss_pred ChHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHH
Q 004411 130 PADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLR 209 (755)
Q Consensus 130 ~~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr 209 (755)
+++++++||+||||++|||+|||+++. ..|+++.|.+|+++|+.||+++.+.+++ +|+|||||||++++|.++|
T Consensus 69 ~~~~~~~~y~gf~~~~lWp~~H~~~~~-----~~~~~~~w~~y~~vN~~fa~~l~~~~~~-~DiV~vHdyhl~~l~~~lr 142 (482)
T 1uqt_A 69 SEQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELR 142 (482)
T ss_dssp CHHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHH
T ss_pred CHHHHHHHHHHhhhhhccccccCcCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEECchHHHHHHHHH
Confidence 999999999999999999999999865 5799999999999999999999999886 5999999999999999999
Q ss_pred hhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEE
Q 004411 210 KRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTV 289 (755)
Q Consensus 210 ~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~ 289 (755)
++.++++|+||+|+|||++++|+++|++++++++++++|+||||+++|+++|+++|+++++.+... ++ .+.++|+.+
T Consensus 143 ~~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~-~~--~~~~~g~~~ 219 (482)
T 1uqt_A 143 KRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRS-AK--SHTAWGKAF 219 (482)
T ss_dssp HTTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEET-TT--EEEETTEEE
T ss_pred HhCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCcccc-CC--eEEECCeEE
Confidence 999999999999999999999999999999999999999999999999999999999999987654 33 267889999
Q ss_pred EEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 004411 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN 369 (755)
Q Consensus 290 ~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 369 (755)
+|.++|+|||++.|.+....+++.+ .+++|++++++++|++|||+++.||+..+|+||++|++++|+++++++|||||.
T Consensus 220 ~v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~ 298 (482)
T 1uqt_A 220 RTEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 298 (482)
T ss_dssp EEEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECC
T ss_pred EEEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEEC
Confidence 9999999999999987554444444 567889999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCC
Q 004411 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGS 449 (755)
Q Consensus 370 p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~ 449 (755)
|+|+++++|+++++++++++++||.+||..+|.||+|+++.++++++.++|++|||||+||++||||||++||||||.+
T Consensus 299 p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~- 377 (482)
T 1uqt_A 299 TSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP- 377 (482)
T ss_dssp BCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT-
T ss_pred CCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999862
Q ss_pred CccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHH
Q 004411 450 PVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAY 529 (755)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 529 (755)
.++||+|+|+++|+++++.+|++|||+|++++|+||.++|+|++++|+.++++++++|+++|+..
T Consensus 378 ---------------~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~ 442 (482)
T 1uqt_A 378 ---------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINH 442 (482)
T ss_dssp ---------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHH
T ss_pred ---------------CCCCCEEEECCCCCHHHhCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 24589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 004411 530 WAKSIDQDLERA 541 (755)
Q Consensus 530 W~~~~l~~l~~~ 541 (755)
|+++|++.++++
T Consensus 443 ~a~~~l~~l~~~ 454 (482)
T 1uqt_A 443 WQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 999999999875
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=248.97 Aligned_cols=313 Identities=16% Similarity=0.176 Sum_probs=233.4
Q ss_pred HHHHHHHHHHHHHHHHHHh--CCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCch---hhhhcCCCh------
Q 004411 169 WQAYLSANKVFADKVMEVI--NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS---EIYRTLPVR------ 237 (755)
Q Consensus 169 w~~Y~~vN~~fa~~i~~~~--~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~r~lp~~------ 237 (755)
+..+....+.....+...+ ...-|+|++|+++..+++.++++. .++|+++++|..++.. ..+..-..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhc-cCCCEEEEecccccccCchHHhCccccccccccc
Confidence 3444444444444444332 122499999999998888888754 5899999999987531 111111111
Q ss_pred --HHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHH
Q 004411 238 --DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQK 315 (755)
Q Consensus 238 --~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~ 315 (755)
...-..+-.+|.|.+.+..+++.... .++.. ..++.++|+|||++.|.+....+.....
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~~---------------~~~i~vi~ngvd~~~~~~~~~~~~~~~~ 238 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRNF---------------EGKITYVFNGIDCSFWNESYLTGSRDER 238 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGGG---------------TTSEEECCCCCCTTTSCGGGSCSCHHHH
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhh----hhhhc---------------CCceeecCCCCCchhcCcccccchhhhh
Confidence 22334456799999999987776332 11111 1257789999999999775322223344
Q ss_pred HHHHHHHc--CCceEEEEecccc-ccCChHHHHHHHHHHHHhC--CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHH
Q 004411 316 VKELKEKF--DGKIVILGVDDMD-LFKGISLKFLAMGQLLEQH--PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAE 390 (755)
Q Consensus 316 ~~~lr~~~--~~~~vil~VdRld-~~KGi~~~l~A~~~ll~~~--P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~ 390 (755)
...+++++ +++++|+++||+. +.||+..+++|++++.+++ |+++ |+++|. ++ .++.+++++++.
T Consensus 239 ~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~----l~i~G~-----g~--~~~~~~l~~~~~ 307 (439)
T 3fro_A 239 KKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FIIIGK-----GD--PELEGWARSLEE 307 (439)
T ss_dssp HHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEE----EEEECC-----CC--HHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCCeE----EEEEcC-----CC--hhHHHHHHHHHh
Confidence 56677776 3459999999999 9999999999999998766 6654 888873 22 234456677776
Q ss_pred HHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceE
Q 004411 391 EINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470 (755)
Q Consensus 391 ~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~l 470 (755)
+.+ .++++.+.++.+++.++|+.||++|+||..||||++++||||||. |+
T Consensus 308 ~~~---------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~---------------------Pv 357 (439)
T 3fro_A 308 KHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA---------------------IP 357 (439)
T ss_dssp HCT---------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTC---------------------EE
T ss_pred hcC---------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCC---------------------Ce
Confidence 643 256677889999999999999999999999999999999999975 99
Q ss_pred EEeCCCCcccccC--CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHHH
Q 004411 471 IVSEFIGCSPSLS--GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERAC 542 (755)
Q Consensus 471 V~Se~~G~~~~l~--~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 542 (755)
|+|+.+|..+.+. .|++++|.|++++|++|.+++++.++.+....++.+++++++++..+++++++-++++.
T Consensus 358 i~s~~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 358 IASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp EEESSTHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCS
T ss_pred EEcCCCCcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Confidence 9999999998883 59999999999999999999995556777778889999999999999999998877654
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-24 Score=246.92 Aligned_cols=293 Identities=15% Similarity=0.135 Sum_probs=200.7
Q ss_pred CCEEEEeCCccchHHHHHHhhc------CCCeEEEEEecCC-----Cchhhhh-cCCCh--------------------H
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRF------HRVKVGFFLHSPF-----PSSEIYR-TLPVR--------------------D 238 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~~r-~lp~~--------------------~ 238 (755)
+||+++||+|..++|.+++... .+++++|+.|..- |....-. .++.. .
T Consensus 154 ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 233 (536)
T 3vue_A 154 DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKIN 233 (536)
T ss_dssp CEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEE
T ss_pred CEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchh
Confidence 3788999999999999998764 3689999999752 2111100 01110 1
Q ss_pred HHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccC--------c
Q 004411 239 EILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL--------D 310 (755)
Q Consensus 239 ~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~--------~ 310 (755)
-+-.++..||.|..-+..|++..++.-. .|.. +....+..+|.+||||||.+.|.+.... .
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~~--~g~~---------l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~ 302 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGIA--RGCE---------LDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDAT 302 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTCC--CCSS---------SCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTT
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcccc--cccc---------cccccccCCeEEEECCcchhhcCCCCccccccccchh
Confidence 2445678899999999998887653110 0110 1112344578899999999999764210 0
Q ss_pred h----hHHHHHHHHHHc-----CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHH
Q 004411 311 V----TGQKVKELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDL 381 (755)
Q Consensus 311 ~----~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l 381 (755)
. .......+++++ ++.++|++|||+++.||+..+++|+++++++++ .|+++|.. + . +.
T Consensus 303 ~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~------~l~l~G~G---~-~---~~ 369 (536)
T 3vue_A 303 TAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV------QIVLLGTG---K-K---KF 369 (536)
T ss_dssp THHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC------EEEEECCB---C-H---HH
T ss_pred hhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC------eEEEEecc---C-c---hH
Confidence 0 111223455555 367899999999999999999999999976433 25556532 2 2 22
Q ss_pred HHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCC
Q 004411 382 LSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEK 461 (755)
Q Consensus 382 ~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~ 461 (755)
...+..++...+. .|.+. +..+.+++..+|+.||+||+||.+||||++++|||+||.
T Consensus 370 ~~~~~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~-------------- 426 (536)
T 3vue_A 370 EKLLKSMEEKYPG--------KVRAV-VKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGT-------------- 426 (536)
T ss_dssp HHHHHHHHHHSTT--------TEEEE-CSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTC--------------
T ss_pred HHHHHHHHhhcCC--------ceEEE-EeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCC--------------
Confidence 2334444444322 25544 467899999999999999999999999999999999975
Q ss_pred CCCCCCceEEEeCCCCcccccC---CcE----------EeCCCCHHHHHHHHHHHhcCCH-HHHHHHHHHHhhHh-hhcC
Q 004411 462 NPPQKKSVIIVSEFIGCSPSLS---GAI----------RVNPWNVDAVADAMDSALQMEN-QEKILRHEKHYKYI-SSHD 526 (755)
Q Consensus 462 ~~~~~~g~lV~Se~~G~~~~l~---~ai----------~VnP~d~~~~A~ai~~aL~m~~-~er~~r~~~~~~~v-~~~~ 526 (755)
|+|+|+.+|+.+.+. +|+ +|+|.|++++|++|.++|..-. ++++++. ++.+ +.++
T Consensus 427 -------PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~---~~am~~~fS 496 (536)
T 3vue_A 427 -------PCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMV---RNCMNQDLS 496 (536)
T ss_dssp -------CEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHH---HHHHHSCCS
T ss_pred -------CEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHH---HHHHHhcCC
Confidence 899999999999883 355 7899999999999999986322 2222222 2222 3578
Q ss_pred HHHHHHHHHHHHHH
Q 004411 527 VAYWAKSIDQDLER 540 (755)
Q Consensus 527 ~~~W~~~~l~~l~~ 540 (755)
|.+=|++|.+-+.+
T Consensus 497 W~~~A~~y~~ly~~ 510 (536)
T 3vue_A 497 WKGPAKNWENVLLG 510 (536)
T ss_dssp SHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888776654
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.9e-23 Score=231.79 Aligned_cols=299 Identities=17% Similarity=0.107 Sum_probs=207.8
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCch----hhhhc--CC-------------ChHHHHHHhhhCCEEE
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS----EIYRT--LP-------------VRDEILKSLLNSDLIG 251 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~----e~~r~--lp-------------~~~~il~~ll~~Dlig 251 (755)
-|+|++|+++..+++.+++.+..++|+++++|..++.. ..+.. ++ ...-.-..+..+|.|.
T Consensus 130 ~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 209 (485)
T 2qzs_A 130 PDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHIT 209 (485)
T ss_dssp CSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEE
T ss_pred CCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEE
Confidence 49999999998888888763446799999999875421 11111 01 0112223356689999
Q ss_pred EeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeE--EEEEEEeccCCcccccccccC-----------chhHHHHHH
Q 004411 252 FHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT--VSIKILPVGIHMGQFESIMSL-----------DVTGQKVKE 318 (755)
Q Consensus 252 f~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~--~~i~v~p~GId~~~f~~~~~~-----------~~~~~~~~~ 318 (755)
..+....+.+... ..|.... +. ...+. .++.++|+|||.+.|.+.... .........
T Consensus 210 ~~S~~~~~~~~~~---~~~~~~~---~~----~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (485)
T 2qzs_A 210 AVSPTYAREITEP---QFAYGME---GL----LQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQ 279 (485)
T ss_dssp ESSHHHHHHTTSH---HHHTTCH---HH----HHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHH
T ss_pred ecCHHHHHHHhcc---ccCcchH---HH----HHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHH
Confidence 9888766555321 0110000 00 00001 257789999999988754210 001112345
Q ss_pred HHHHcC-----CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 004411 319 LKEKFD-----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEIN 393 (755)
Q Consensus 319 lr~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In 393 (755)
++++++ ++++|+++||+++.||+..+++|++++.+ ++ +.|+++|. ++. ++++++++++.+.+
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~-----g~~--~~~~~l~~~~~~~~ 346 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QG----GQLALLGA-----GDP--VLQEGFLAAAAEYP 346 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TT----CEEEEEEE-----ECH--HHHHHHHHHHHHST
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CC----cEEEEEeC-----Cch--HHHHHHHHHHHhCC
Confidence 666662 67899999999999999999999999876 34 44888884 221 34566777776642
Q ss_pred cccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe
Q 004411 394 LNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS 473 (755)
Q Consensus 394 ~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S 473 (755)
..|+++.+. +.+++..+|+.||++|+||..||||++++||||||. |+|+|
T Consensus 347 --------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~---------------------PvI~s 396 (485)
T 2qzs_A 347 --------GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT---------------------LPLVR 396 (485)
T ss_dssp --------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC---------------------EEEEE
T ss_pred --------CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCC---------------------CEEEC
Confidence 147656665 788889999999999999999999999999999975 99999
Q ss_pred CCCCcccccC------------CcEEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 474 EFIGCSPSLS------------GAIRVNPWNVDAVADAMDSALQ--MENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 474 e~~G~~~~l~------------~ai~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
+.+|..+.+. +|++|+|.|++++|++|.+++. ..++.+..+.++.++ +.+++...++++++-++
T Consensus 397 ~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~ 474 (485)
T 2qzs_A 397 RTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYY 474 (485)
T ss_dssp SSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHH
T ss_pred CCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHH
Confidence 9999988883 4899999999999999999994 234455554445543 67899999999988887
Q ss_pred HHHHh
Q 004411 540 RACRD 544 (755)
Q Consensus 540 ~~~~~ 544 (755)
+...+
T Consensus 475 ~~~~~ 479 (485)
T 2qzs_A 475 RLKLE 479 (485)
T ss_dssp HHC--
T ss_pred Hhhhh
Confidence 76544
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-23 Score=226.25 Aligned_cols=286 Identities=17% Similarity=0.218 Sum_probs=211.7
Q ss_pred HHHHhCCCCCEEEEeCCccc-hHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHH-hhhCCEEEEeCHHHHHH
Q 004411 183 VMEVINPDEDYVWIHDYHLM-VLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKS-LLNSDLIGFHTFDYARH 260 (755)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~-llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~-ll~~Dligf~t~~~~~~ 260 (755)
+++..++ |+||+|+...+ ++...+++ ....++.++.|...+. +...+....+++. +-.+|.|.+.+....+.
T Consensus 81 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~---~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 154 (394)
T 3okp_A 81 IIREREI--DNVWFGAAAPLALMAGTAKQ-AGASKVIASTHGHEVG---WSMLPGSRQSLRKIGTEVDVLTYISQYTLRR 154 (394)
T ss_dssp HHHHTTC--SEEEESSCTTGGGGHHHHHH-TTCSEEEEECCSTHHH---HTTSHHHHHHHHHHHHHCSEEEESCHHHHHH
T ss_pred HHHhcCC--CEEEECCcchHHHHHHHHHh-cCCCcEEEEeccchhh---hhhcchhhHHHHHHHHhCCEEEEcCHHHHHH
Confidence 3444455 89999987655 34444444 3334588899964321 1222333333333 45689999999877766
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccc
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL 337 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~ 337 (755)
+.+. .+. ..++.++|+|||.+.|.+.. ......+++++ +++++|+++||+++
T Consensus 155 ~~~~----~~~----------------~~~~~vi~ngv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 209 (394)
T 3okp_A 155 FKSA----FGS----------------HPTFEHLPSGVDVKRFTPAT-----PEDKSATRKKLGFTDTTPVIACNSRLVP 209 (394)
T ss_dssp HHHH----HCS----------------SSEEEECCCCBCTTTSCCCC-----HHHHHHHHHHTTCCTTCCEEEEESCSCG
T ss_pred HHHh----cCC----------------CCCeEEecCCcCHHHcCCCC-----chhhHHHHHhcCCCcCceEEEEEecccc
Confidence 6542 121 13678899999999886521 12335667777 35589999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004411 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (755)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 417 (755)
.||+..+++|++++.+++|+++ |+++|. ++..+ ++++++..++. .|+++ +.++.+++.
T Consensus 210 ~Kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~----~l~~~~~~~~~--------~v~~~-g~~~~~~~~ 267 (394)
T 3okp_A 210 RKGQDSLIKAMPQVIAARPDAQ----LLIVGS-----GRYES----TLRRLATDVSQ--------NVKFL-GRLEYQDMI 267 (394)
T ss_dssp GGCHHHHHHHHHHHHHHSTTCE----EEEECC-----CTTHH----HHHHHTGGGGG--------GEEEE-ESCCHHHHH
T ss_pred ccCHHHHHHHHHHHHhhCCCeE----EEEEcC-----chHHH----HHHHHHhcccC--------eEEEc-CCCCHHHHH
Confidence 9999999999999999999876 887773 33333 33444322211 36655 589999999
Q ss_pred HHHHhCcEEEEcCCC-------cCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEe
Q 004411 418 PYYAIAECCVVNCVR-------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRV 488 (755)
Q Consensus 418 aly~~ADv~vvtS~~-------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~V 488 (755)
++|+.||++|+||.. |||+++++|||+||. |+|+|+.+|..+.+. +|+++
T Consensus 268 ~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~---------------------PvI~~~~~~~~e~i~~~~g~~~ 326 (394)
T 3okp_A 268 NTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV---------------------PVIAGTSGGAPETVTPATGLVV 326 (394)
T ss_dssp HHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC---------------------CEEECSSTTGGGGCCTTTEEEC
T ss_pred HHHHhCCEEEecCccccccccccccCcHHHHHHHcCC---------------------CEEEeCCCChHHHHhcCCceEe
Confidence 999999999999999 999999999999975 899999999988884 58999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHHHHHHHHHHHHH
Q 004411 489 NPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDLERACR 543 (755)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~ 543 (755)
+|.|++++|++|.++++. ++.++...++.++++.+ +++..+++++++-+++...
T Consensus 327 ~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r 381 (394)
T 3okp_A 327 EGSDVDKLSELLIELLDD-PIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPR 381 (394)
T ss_dssp CTTCHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC
T ss_pred CCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcc
Confidence 999999999999999995 45667777788888876 8999999999988876543
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-24 Score=244.49 Aligned_cols=303 Identities=13% Similarity=0.065 Sum_probs=214.4
Q ss_pred CEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhh-hhcC----C---------ChHHH-HHHhhhCCEEEEeCHH
Q 004411 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEI-YRTL----P---------VRDEI-LKSLLNSDLIGFHTFD 256 (755)
Q Consensus 192 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~-~r~l----p---------~~~~i-l~~ll~~Dligf~t~~ 256 (755)
|+||+|+++..+++.++.+. .++|++++.|..++.... +... | .+..+ -..+-.+|.|.+.+..
T Consensus 122 Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~ 200 (499)
T 2r60_A 122 QVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQ 200 (499)
T ss_dssp SEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHH
T ss_pred CEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHH
Confidence 99999998766666666554 368899999986542110 0000 0 00011 1224568999888876
Q ss_pred HHHHHHHHHhhHhC-ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--------CCce
Q 004411 257 YARHFLSSCSRMLG-LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--------DGKI 327 (755)
Q Consensus 257 ~~~~Fl~~~~r~lg-~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--------~~~~ 327 (755)
..+.+... ..+| +.. . ....++.++|+|||.+.|.+... ......+++++ .+++
T Consensus 201 ~~~~~~~~--~~~g~~~~-~----------~~~~ki~vi~ngvd~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~ 263 (499)
T 2r60_A 201 ERFGQYSH--DLYRGAVN-V----------EDDDKFSVIPPGVNTRVFDGEYG----DKIKAKITKYLERDLGSERMELP 263 (499)
T ss_dssp HHHHTTTS--GGGTTTCC-T----------TCGGGEEECCCCBCTTTSSSCCC----HHHHHHHHHHHHHHSCGGGTTSC
T ss_pred HHHHHHhh--hccccccc-c----------cCCCCeEEECCCcChhhcCccch----hhhHHHHHHHhcccccccCCCCc
Confidence 65544320 0012 100 0 01235778999999998865321 11223455543 3778
Q ss_pred EEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCC----c---hhHHHHHHHHHHHHHHHhcccCCCC
Q 004411 328 VILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSS----G---KDVQDLLSDTNRIAEEINLNFGKPG 400 (755)
Q Consensus 328 vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~----~---~~~~~l~~~i~~lv~~In~~~g~~~ 400 (755)
+|+++||+++.||+..+++|++++.+++|+. +.|+++|... +. + ....++.+++++++++.+.. +
T Consensus 264 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~----~ 335 (499)
T 2r60_A 264 AIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR----G 335 (499)
T ss_dssp EEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB----T
T ss_pred EEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC----c
Confidence 9999999999999999999999998776643 3466666411 11 0 11234466777887775432 1
Q ss_pred CccEEEecCCCChhhHHHHHHhC----cEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCC
Q 004411 401 YEPIVIIKEPLSTQDKVPYYAIA----ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI 476 (755)
Q Consensus 401 ~~pV~~~~~~v~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 476 (755)
.|+|+ |.++.+++.++|+.| |++|+||..||||++++||||||. |+|+|+.+
T Consensus 336 --~V~~~-G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~---------------------PvI~s~~~ 391 (499)
T 2r60_A 336 --KVSMF-PLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL---------------------PAVVTRNG 391 (499)
T ss_dssp --TEEEE-ECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC---------------------CEEEESSB
T ss_pred --eEEEC-CCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC---------------------CEEEecCC
Confidence 37765 689999999999999 999999999999999999999975 89999999
Q ss_pred CcccccC---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh-cCHHHHHHHHHHHHHHHHHhc
Q 004411 477 GCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDLERACRDH 545 (755)
Q Consensus 477 G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~~~ 545 (755)
|..+.+. +|++|+|.|++++|++|.++++. ++.+....++.++++.+ +++...++.+++-++++....
T Consensus 392 g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 392 GPAEILDGGKYGVLVDPEDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp HHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred CHHHHhcCCceEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 9888883 48999999999999999999995 45667777788898887 999999999999988876553
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.91 E-value=9.3e-23 Score=231.19 Aligned_cols=296 Identities=14% Similarity=0.121 Sum_probs=207.3
Q ss_pred CCEEEEeCCccchHHHHHHhh-cCCCeEEEEEecCCCch----hhhhc--CCC-------------hHHHHHHhhhCCEE
Q 004411 191 EDYVWIHDYHLMVLPSFLRKR-FHRVKVGFFLHSPFPSS----EIYRT--LPV-------------RDEILKSLLNSDLI 250 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~----e~~r~--lp~-------------~~~il~~ll~~Dli 250 (755)
-|+|++|+++..+++.++++. ..++|+++++|..++.. ..+.. +|. ..-.-..+..+|.|
T Consensus 131 ~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 210 (485)
T 1rzu_A 131 PDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATAL 210 (485)
T ss_dssp CSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEE
T ss_pred CCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEE
Confidence 499999999888888887764 35789999999875421 11111 110 01222334668999
Q ss_pred EEeCHHHHHHHHHHHhhHhC--ccccccCceeEEEEcCeEEEEEEEeccCCcccccccccC-----------chhHHHHH
Q 004411 251 GFHTFDYARHFLSSCSRMLG--LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL-----------DVTGQKVK 317 (755)
Q Consensus 251 gf~t~~~~~~Fl~~~~r~lg--~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~-----------~~~~~~~~ 317 (755)
...+....+.+.+. ..| ++.. +.....++.++|+|||.+.|.+.... +.......
T Consensus 211 i~~S~~~~~~~~~~---~~g~~~~~~---------~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (485)
T 1rzu_A 211 STVSPSYAEEILTA---EFGMGLEGV---------IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKK 278 (485)
T ss_dssp EESCHHHHHHTTSH---HHHTTCHHH---------HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHH
T ss_pred EecCHhHHHHHhcc---ccCcchHHH---------HHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHH
Confidence 99888776665421 011 0000 00011256789999999988754210 00111234
Q ss_pred HHHHHcC---C-ceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 004411 318 ELKEKFD---G-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEIN 393 (755)
Q Consensus 318 ~lr~~~~---~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In 393 (755)
.++++++ + +++|++|||+++.||+..+++|++++.+ ++ +.|+++|. ++. ++++++++++.+.+
T Consensus 279 ~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~-----g~~--~~~~~l~~~~~~~~ 345 (485)
T 1rzu_A 279 AVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LG----GRLVVLGA-----GDV--ALEGALLAAASRHH 345 (485)
T ss_dssp HHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TT----CEEEEEEC-----BCH--HHHHHHHHHHHHTT
T ss_pred HHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cC----ceEEEEeC-----Cch--HHHHHHHHHHHhCC
Confidence 5666662 2 6799999999999999999999999876 34 44888884 321 34566777776642
Q ss_pred cccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe
Q 004411 394 LNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS 473 (755)
Q Consensus 394 ~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S 473 (755)
..|+++.+. +.+++..+|+.||++|+||..||||++++||||||. |+|+|
T Consensus 346 --------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~---------------------PvI~s 395 (485)
T 1rzu_A 346 --------GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC---------------------IPVVA 395 (485)
T ss_dssp --------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC---------------------EEEEE
T ss_pred --------CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCC---------------------CEEEe
Confidence 137756655 788889999999999999999999999999999975 99999
Q ss_pred CCCCcccccC------------CcEEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHH
Q 004411 474 EFIGCSPSLS------------GAIRVNPWNVDAVADAMDSALQ--MENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (755)
Q Consensus 474 e~~G~~~~l~------------~ai~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (755)
..+|..+.+. +|++++|.|++++|++|.+++. ..++.+....++.++ ..+++...++++++-++
T Consensus 396 ~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~ 473 (485)
T 1rzu_A 396 RTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYS 473 (485)
T ss_dssp SSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHH
T ss_pred CCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHH
Confidence 9999998883 4799999999999999999994 234455555555543 67899999999988777
Q ss_pred HHHH
Q 004411 540 RACR 543 (755)
Q Consensus 540 ~~~~ 543 (755)
++..
T Consensus 474 ~~~~ 477 (485)
T 1rzu_A 474 QLIS 477 (485)
T ss_dssp HHTC
T ss_pred HhhC
Confidence 6543
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-23 Score=230.60 Aligned_cols=294 Identities=17% Similarity=0.213 Sum_probs=213.1
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhh-cC----C-ChHHHHH-HhhhCCEEEEeCHHHHHHHHH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR-TL----P-VRDEILK-SLLNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r-~l----p-~~~~il~-~ll~~Dligf~t~~~~~~Fl~ 263 (755)
.|+|++|++...+++.++.++ .++|+++++|..++...... .. + .+..+.+ .+-.+|.|.+.+....+.+.+
T Consensus 123 ~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 201 (438)
T 3c48_A 123 YDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMH 201 (438)
T ss_dssp CSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred CCEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHH
Confidence 499999987665555555544 37899999998754211000 00 0 0111112 245689999999877766653
Q ss_pred HHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCC
Q 004411 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (755)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 340 (755)
.+|+. ..++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.||
T Consensus 202 ----~~g~~---------------~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg 257 (438)
T 3c48_A 202 ----HYDAD---------------PDRISVVSPGADVELYSPGND-----RATERSRRELGIPLHTKVVAFVGRLQPFKG 257 (438)
T ss_dssp ----HHCCC---------------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGC
T ss_pred ----HhCCC---------------hhheEEecCCccccccCCccc-----chhhhhHHhcCCCCCCcEEEEEeeecccCC
Confidence 12322 124678999999998865311 1122356666 46889999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHH
Q 004411 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (755)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 420 (755)
+..+++|++.+.+++|+. ++.|+++|.+.. .++ ..+++++++.+.+.. + .|.++ +.++.+++.++|
T Consensus 258 ~~~li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~----~~~~l~~~~~~~~l~----~--~v~~~-g~~~~~~~~~~~ 323 (438)
T 3c48_A 258 PQVLIKAVAALFDRDPDR--NLRVIICGGPSG-PNA----TPDTYRHMAEELGVE----K--RIRFL-DPRPPSELVAVY 323 (438)
T ss_dssp HHHHHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTCT----T--TEEEE-CCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CCc----HHHHHHHHHHHcCCC----C--cEEEc-CCCChHHHHHHH
Confidence 999999999999998842 355888885321 122 234555666554321 1 36655 689999999999
Q ss_pred HhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHH
Q 004411 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (755)
Q Consensus 421 ~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A 497 (755)
+.||++|+||..|||+++++|||+||. |+|+|..+|..+.+. .|++++|.|++++|
T Consensus 324 ~~adv~v~ps~~e~~~~~~~Eama~G~---------------------PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la 382 (438)
T 3c48_A 324 RAADIVAVPSFNESFGLVAMEAQASGT---------------------PVIAARVGGLPIAVAEGETGLLVDGHSPHAWA 382 (438)
T ss_dssp HHCSEEEECCSCCSSCHHHHHHHHTTC---------------------CEEEESCTTHHHHSCBTTTEEEESSCCHHHHH
T ss_pred HhCCEEEECccccCCchHHHHHHHcCC---------------------CEEecCCCChhHHhhCCCcEEECCCCCHHHHH
Confidence 999999999999999999999999975 899999999988884 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHHHHhc
Q 004411 498 DAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDH 545 (755)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 545 (755)
++|.++++. ++.+....++.++++.++++...++++++.++++....
T Consensus 383 ~~i~~l~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 383 DALATLLDD-DETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE 429 (438)
T ss_dssp HHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhc
Confidence 999999995 44666677788999988999999999999988876653
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=225.24 Aligned_cols=286 Identities=15% Similarity=0.148 Sum_probs=204.9
Q ss_pred HhCCCCCEEEEeCCccchHHHHHHhh-cC-CCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCC--EEEEeCHHHHHHH
Q 004411 186 VINPDEDYVWIHDYHLMVLPSFLRKR-FH-RVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSD--LIGFHTFDYARHF 261 (755)
Q Consensus 186 ~~~~~~DiVwvhDyhl~llp~~lr~~-~~-~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~D--ligf~t~~~~~~F 261 (755)
..++ |+|++|.+...+.+.+.+.. .| ..++...+|...+... ..+-..+-.+| .|.+.+....+.+
T Consensus 79 ~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ii~~S~~~~~~~ 148 (413)
T 3oy2_A 79 VHKP--DIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR--------ENLWWIFSHPKVVGVMAMSKCWISDI 148 (413)
T ss_dssp HHCC--SEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCC--------GGGGGGGGCTTEEEEEESSTHHHHHH
T ss_pred hcCC--CEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhH--------HHHHHHHhccCCceEEEcCHHHHHHH
Confidence 3455 89999955444333333222 22 3455666665443211 11212234567 8888887766665
Q ss_pred HHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---C--CceEEEEecccc
Q 004411 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---D--GKIVILGVDDMD 336 (755)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~--~~~vil~VdRld 336 (755)
.. +|. ..++.++|+|||++.|.. .++++ . ++++|+++||++
T Consensus 149 ~~-----~~~----------------~~~~~vi~ngvd~~~~~~-------------~~~~~~~~~~~~~~~il~vGr~~ 194 (413)
T 3oy2_A 149 CN-----YGC----------------KVPINIVSHFVDTKTIYD-------------ARKLVGLSEYNDDVLFLNMNRNT 194 (413)
T ss_dssp HH-----TTC----------------CSCEEECCCCCCCCCCTT-------------HHHHTTCGGGTTSEEEECCSCSS
T ss_pred HH-----cCC----------------CCceEEeCCCCCHHHHHH-------------HHHhcCCCcccCceEEEEcCCCc
Confidence 43 232 125788999999988821 12233 2 688999999999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhH
Q 004411 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (755)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el 416 (755)
+.||+..+++|+.++.+++|+++ |+++|....... .++++.+++++.+.+..-....+..|+++.+.++.+++
T Consensus 195 ~~Kg~~~li~a~~~l~~~~~~~~----l~ivG~g~~~~~---~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~ 267 (413)
T 3oy2_A 195 ARKRLDIYVLAAARFISKYPDAK----VRFLCNSHHESK---FDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERV 267 (413)
T ss_dssp GGGTHHHHHHHHHHHHHHCTTCC----EEEEEECCTTCS---CCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHH
T ss_pred hhcCcHHHHHHHHHHHHhCCCcE----EEEEeCCcccch---hhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHH
Confidence 99999999999999999999987 888885432111 12455667777665432100000025777889999999
Q ss_pred HHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---C---------
Q 004411 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---G--------- 484 (755)
Q Consensus 417 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~--------- 484 (755)
.++|+.||++|+||..||||++++|||+||. |+|+|..+|..+.+. +
T Consensus 268 ~~~~~~adv~v~pS~~E~~~~~~lEAma~G~---------------------PvI~s~~~g~~e~v~~~~~~~i~~~~~~ 326 (413)
T 3oy2_A 268 DMMYNACDVIVNCSSGEGFGLCSAEGAVLGK---------------------PLIISAVGGADDYFSGDCVYKIKPSAWI 326 (413)
T ss_dssp HHHHHHCSEEEECCSCCSSCHHHHHHHTTTC---------------------CEEEECCHHHHHHSCTTTSEEECCCEEE
T ss_pred HHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC---------------------CEEEcCCCChHHHHccCccccccccccc
Confidence 9999999999999999999999999999975 899999999888884 2
Q ss_pred ------cE--EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHHHHHHHHhc
Q 004411 485 ------AI--RVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLERACRDH 545 (755)
Q Consensus 485 ------ai--~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~~~~~ 545 (755)
|+ +++|.|++++|++| ++++. +++++.+.++.++++. .+++..+++++++-++++.+..
T Consensus 327 ~~~~~~G~~gl~~~~d~~~la~~i-~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 327 SVDDRDGIGGIEGIIDVDDLVEAF-TFFKD-EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp ECTTTCSSCCEEEECCHHHHHHHH-HHTTS-HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred ccccccCcceeeCCCCHHHHHHHH-HHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 77 99999999999999 99985 4567777778899885 6799999999999998876543
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=231.97 Aligned_cols=299 Identities=14% Similarity=0.136 Sum_probs=206.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhh
Q 004411 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLN 246 (755)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~ 246 (755)
..|..|....+.+++.+ +..++ |+|++|+++...+..+++++ .|+.++.|..++..... ....+.+.+..
T Consensus 106 ~~~~~~~~~~~~~~~~l-~~~~~--Dvv~~~~~~~~~~~~~~~~~---~p~v~~~h~~~~~~~~~----~~~~~~~~~~~ 175 (416)
T 2x6q_A 106 EMKELYLNVNRENSKFI-DLSSF--DYVLVHDPQPAALIEFYEKK---SPWLWRCHIDLSSPNRE----FWEFLRRFVEK 175 (416)
T ss_dssp HHHHHHHHHHHHHHHSS-CGGGS--SEEEEESSTTGGGGGGSCCC---SCEEEECCSCCSSCCHH----HHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHH-hhcCC--CEEEEeccchhhHHHHHHhc---CCEEEEEccccCCccHH----HHHHHHHHHHh
Confidence 34555554444433332 22244 99999999877665555432 78999999877532100 00111122334
Q ss_pred CCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---
Q 004411 247 SDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--- 323 (755)
Q Consensus 247 ~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--- 323 (755)
+|.+.+.+.++. .++ +.. .++.++|+|||+..+.+.... ......+++++
T Consensus 176 ~~~~i~~~s~~~-----------------~~~-----~~~--~~~~vi~ngvd~~~~~~~~~~---~~~~~~~r~~~~~~ 228 (416)
T 2x6q_A 176 YDRYIFHLPEYV-----------------QPE-----LDR--NKAVIMPPSIDPLSEKNVELK---QTEILRILERFDVD 228 (416)
T ss_dssp SSEEEESSGGGS-----------------CTT-----SCT--TTEEECCCCBCTTSTTTSCCC---HHHHHHHHHHTTCC
T ss_pred CCEEEEechHHH-----------------Hhh-----CCc--cceEEeCCCCChhhhcccccC---hhhHHHHHHHhCCC
Confidence 455443332211 111 011 246689999998877542211 22345567776
Q ss_pred CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004411 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~p 403 (755)
+++++|+++||+++.||+..+++|++.+.+++|+++ |+++|.... ..+ +..+.+++++++.+.. ..
T Consensus 229 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~----l~i~G~g~~-~~~---~~~~~l~~~~~~~~~~------~~ 294 (416)
T 2x6q_A 229 PEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQ----LLLVGVMAH-DDP---EGWIYFEKTLRKIGED------YD 294 (416)
T ss_dssp TTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCE----EEEEECCCT-TCH---HHHHHHHHHHHHHTTC------TT
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEEecCcc-cch---hHHHHHHHHHHHhCCC------Cc
Confidence 367899999999999999999999999999999876 888885321 112 2334556666665432 14
Q ss_pred EEEec--CCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc
Q 004411 404 IVIIK--EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481 (755)
Q Consensus 404 V~~~~--~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 481 (755)
|.+++ ..++.+++..+|+.||++|+||..||||++++||||||. |+|+|+.+|..+.
T Consensus 295 V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~---------------------PvI~~~~~g~~e~ 353 (416)
T 2x6q_A 295 VKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGK---------------------PVIGRAVGGIKFQ 353 (416)
T ss_dssp EEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC---------------------CEEEESCHHHHHH
T ss_pred EEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCC---------------------CEEEccCCCChhh
Confidence 77664 245688999999999999999999999999999999975 8999999998888
Q ss_pred cC---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh-hcCHHHHHHHHHHHHHH
Q 004411 482 LS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLER 540 (755)
Q Consensus 482 l~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 540 (755)
+. +|++++ |++++|++|.++++.+ +.++...++.++++. .+++...++.+++-+++
T Consensus 354 i~~~~~g~l~~--d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 354 IVDGETGFLVR--DANEAVEVVLYLLKHP-EVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp CCBTTTEEEES--SHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred eecCCCeEEEC--CHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 83 589997 9999999999999954 466666777888886 68999999988877654
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-23 Score=247.67 Aligned_cols=315 Identities=13% Similarity=0.107 Sum_probs=214.3
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChH---------H---HHHHhhhCCEEEEeCHHHH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD---------E---ILKSLLNSDLIGFHTFDYA 258 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~---------~---il~~ll~~Dligf~t~~~~ 258 (755)
-|+|+.|++...+++.+++++. ++|++++.|...+..-......++. . -...+-.||.|...+...+
T Consensus 408 PDVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~ 486 (816)
T 3s28_A 408 PDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEI 486 (816)
T ss_dssp CSEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHH
T ss_pred CeEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHH
Confidence 3999999887777777776664 7899999997543211111111110 0 0114567899998888665
Q ss_pred HHHHHHHhhHhCcccc-ccCce----eEEEEcCeEEEEEEEeccCCcccccccccCch----hHHHHHHH-------HHH
Q 004411 259 RHFLSSCSRMLGLNYE-SKRGY----IGLDYFGRTVSIKILPVGIHMGQFESIMSLDV----TGQKVKEL-------KEK 322 (755)
Q Consensus 259 ~~Fl~~~~r~lg~~~~-~~~~~----~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~----~~~~~~~l-------r~~ 322 (755)
+.....+.. .+.... ...+. -++..... ++.++|+|||.+.|.+...... .......+ ++.
T Consensus 487 ~~l~~~~~~-y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~ 563 (816)
T 3s28_A 487 AGSKETVGQ-YESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEH 563 (816)
T ss_dssp HCCSSSCCT-TGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTE
T ss_pred HHHHHHHHH-hhhhhccccchhhhcccccccCCC--CEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHH
Confidence 532211000 000000 00000 00111111 7889999999999977532211 00111111 111
Q ss_pred -----cCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCC--CCCchhHHHHHHHHHHHHHHHhcc
Q 004411 323 -----FDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA--RSSGKDVQDLLSDTNRIAEEINLN 395 (755)
Q Consensus 323 -----~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~--r~~~~~~~~l~~~i~~lv~~In~~ 395 (755)
-.++++|++|||+++.||+..+++|+.++.+.+|+++ |+++|... .....+..+..+++.+++++.+..
T Consensus 564 lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~----LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~ 639 (816)
T 3s28_A 564 LCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELAN----LVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLN 639 (816)
T ss_dssp ESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCE----EEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCB
T ss_pred hcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeE----EEEEeCCCcccccchhhHHHHHHHHHHHHHcCCC
Confidence 1467899999999999999999999999988777665 88888644 122234445667778888776432
Q ss_pred cCCCCCccEEEec---CCCChhhHHHHHH-hCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEE
Q 004411 396 FGKPGYEPIVIIK---EPLSTQDKVPYYA-IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471 (755)
Q Consensus 396 ~g~~~~~pV~~~~---~~v~~~el~aly~-~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV 471 (755)
..|.|++ +.++.+++..+|+ +|||||+||..||||++++||||||. |+|
T Consensus 640 ------~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~---------------------PVI 692 (816)
T 3s28_A 640 ------GQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL---------------------PTF 692 (816)
T ss_dssp ------BBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC---------------------CEE
T ss_pred ------CcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCC---------------------CEE
Confidence 1377664 2455689999998 68999999999999999999999975 899
Q ss_pred EeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHh----cCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHHHHHHHH
Q 004411 472 VSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSAL----QMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 472 ~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 541 (755)
+|..+|..+.+. +|++|+|.|++++|++|.+++ ..+ +.+....++.++++ +.+++..+++++++-..+.
T Consensus 693 asd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~-~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 693 ATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDP-SHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp EESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred EeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999999883 599999999999999998877 554 46777778889998 6799999999999876654
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=220.41 Aligned_cols=282 Identities=11% Similarity=0.148 Sum_probs=201.5
Q ss_pred HHhCCCCCEEEEeCCccchHHHHH-HhhcC-CCeEEEEEecCCCchhhhhcCCChHHHHH-HhhhCCEEEEeCHHHHHHH
Q 004411 185 EVINPDEDYVWIHDYHLMVLPSFL-RKRFH-RVKVGFFLHSPFPSSEIYRTLPVRDEILK-SLLNSDLIGFHTFDYARHF 261 (755)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~llp~~l-r~~~~-~~~i~~flH~PfP~~e~~r~lp~~~~il~-~ll~~Dligf~t~~~~~~F 261 (755)
+..++ |+|++|+.+...++.++ ++... ++|+.+++|...+ ..+..-+....+.+ .+-.+|.|...+....+.+
T Consensus 96 ~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 171 (394)
T 2jjm_A 96 QRENL--DILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINET 171 (394)
T ss_dssp HHHTC--SEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHH
T ss_pred HHcCC--CEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHH
Confidence 33466 89999987654444444 33322 6899999997422 11111122223333 3456899999888766665
Q ss_pred HHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEecccccc
Q 004411 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLF 338 (755)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~ 338 (755)
.+ ..+. ..++.++|+|||++.|.+... ..+++++ .++++|+++||+.+.
T Consensus 172 ~~----~~~~----------------~~~~~vi~ngv~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~G~~~~~ 223 (394)
T 2jjm_A 172 HE----LVKP----------------NKDIQTVYNFIDERVYFKRDM--------TQLKKEYGISESEKILIHISNFRKV 223 (394)
T ss_dssp HH----HTCC----------------SSCEEECCCCCCTTTCCCCCC--------HHHHHHTTCC---CEEEEECCCCGG
T ss_pred HH----hhCC----------------cccEEEecCCccHHhcCCcch--------HHHHHHcCCCCCCeEEEEeeccccc
Confidence 43 1121 125678999999998865311 2345555 467899999999999
Q ss_pred CChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHH
Q 004411 339 KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVP 418 (755)
Q Consensus 339 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~a 418 (755)
||+..+++|++++.++ +++ .|+++|. +++.+ ++++++.+.+.. ..|.+++ +.+++..
T Consensus 224 Kg~~~li~a~~~l~~~-~~~----~l~i~G~-----g~~~~----~l~~~~~~~~l~------~~v~~~g---~~~~~~~ 280 (394)
T 2jjm_A 224 KRVQDVVQAFAKIVTE-VDA----KLLLVGD-----GPEFC----TILQLVKNLHIE------DRVLFLG---KQDNVAE 280 (394)
T ss_dssp GTHHHHHHHHHHHHHS-SCC----EEEEECC-----CTTHH----HHHHHHHTTTCG------GGBCCCB---SCSCTHH
T ss_pred cCHHHHHHHHHHHHhh-CCC----EEEEECC-----chHHH----HHHHHHHHcCCC------CeEEEeC---chhhHHH
Confidence 9999999999998776 444 4877773 34333 344555443211 1355554 3688999
Q ss_pred HHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHH
Q 004411 419 YYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDA 495 (755)
Q Consensus 419 ly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~ 495 (755)
+|+.||++|+||..||||++++|||+||. |+|+|..+|..+.+. .|++++|.|+++
T Consensus 281 ~~~~adv~v~ps~~e~~~~~~~EAma~G~---------------------PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~ 339 (394)
T 2jjm_A 281 LLAMSDLMLLLSEKESFGLVLLEAMACGV---------------------PCIGTRVGGIPEVIQHGDTGYLCEVGDTTG 339 (394)
T ss_dssp HHHTCSEEEECCSCCSCCHHHHHHHHTTC---------------------CEEEECCTTSTTTCCBTTTEEEECTTCHHH
T ss_pred HHHhCCEEEeccccCCCchHHHHHHhcCC---------------------CEEEecCCChHHHhhcCCceEEeCCCCHHH
Confidence 99999999999999999999999999975 899999999998883 599999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHHHHHHHHHH
Q 004411 496 VADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLERACR 543 (755)
Q Consensus 496 ~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~ 543 (755)
+|++|.++++. ++.+....++.++++ ..+++...++.+++-++++..
T Consensus 340 la~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 340 VADQAIQLLKD-EELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp HHHHHHHHHHC-HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 99999999995 456667777888888 789999999999988876543
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-21 Score=221.47 Aligned_cols=310 Identities=16% Similarity=0.132 Sum_probs=202.8
Q ss_pred CEEEEeCCccchHHHHHHhhcCCCeEEEEEecCC--------CchhhhhcCC--------------ChHHHHH-HhhhCC
Q 004411 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPF--------PSSEIYRTLP--------------VRDEILK-SLLNSD 248 (755)
Q Consensus 192 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf--------P~~e~~r~lp--------------~~~~il~-~ll~~D 248 (755)
|++|.||||..++|.+||++.++++.+|+.|.-- -..+++..+. ..-.+++ ++..||
T Consensus 183 dIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~AD 262 (725)
T 3nb0_A 183 IVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSAD 262 (725)
T ss_dssp EEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred cEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHhCC
Confidence 8999999999999999999999999999999751 0111121111 1112333 356788
Q ss_pred EEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCc----hhHHHH-HHHHHHc
Q 004411 249 LIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLD----VTGQKV-KELKEKF 323 (755)
Q Consensus 249 ligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~----~~~~~~-~~lr~~~ 323 (755)
.|..-+..|++.-. .+++.. ...| +|||||++.|.+..... ..+++. +.++..+
T Consensus 263 ~ITTVS~~yA~Ei~----~Ll~r~---------------~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~ 321 (725)
T 3nb0_A 263 VFTTVSQITAFEAE----HLLKRK---------------PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHF 321 (725)
T ss_dssp EEEESSHHHHHHHH----HHTSSC---------------CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHH----HHhcCC---------------CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhc
Confidence 88888887776543 233321 1123 89999999997741100 111111 1123322
Q ss_pred -------CCceEEEE-ecccc-ccCChHHHHHHHHHHHHhC--CCCCCcEEEEEEecCCCCCchhH-----HHHHHHHHH
Q 004411 324 -------DGKIVILG-VDDMD-LFKGISLKFLAMGQLLEQH--PDLRGKVVLVQITNPARSSGKDV-----QDLLSDTNR 387 (755)
Q Consensus 324 -------~~~~vil~-VdRld-~~KGi~~~l~A~~~ll~~~--P~~~~~vvLvqi~~p~r~~~~~~-----~~l~~~i~~ 387 (755)
.+++++++ +||++ ..||++.+++|+.++...- .+.. +-|+..|..|+...+... +.+.+++.+
T Consensus 322 ~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~-~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~ 400 (725)
T 3nb0_A 322 HGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSK-KTVVAFIVMPAKNNSFTVEALKGQAEVRALEN 400 (725)
T ss_dssp TTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCC-CEEEEEEECCCCEEEECHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCC-CcEEEEEEeCCCCCCCchhhhcchhHHHHHHH
Confidence 24666676 69999 5899999999999987531 1222 223333444554333210 111111111
Q ss_pred -----------------------------------------------------------------------------HHH
Q 004411 388 -----------------------------------------------------------------------------IAE 390 (755)
Q Consensus 388 -----------------------------------------------------------------------------lv~ 390 (755)
.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r 480 (725)
T 3nb0_A 401 TVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIR 480 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHH
Confidence 112
Q ss_pred HHhcccCCCCCccEEEecCCCChh------hHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCC
Q 004411 391 EINLNFGKPGYEPIVIIKEPLSTQ------DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPP 464 (755)
Q Consensus 391 ~In~~~g~~~~~pV~~~~~~v~~~------el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~ 464 (755)
+++..-...+-..|+|+.+.++.. ++..+|+.||+||+||.+||||++++||||||.
T Consensus 481 ~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~----------------- 543 (725)
T 3nb0_A 481 QVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGV----------------- 543 (725)
T ss_dssp HHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTC-----------------
T ss_pred hcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCC-----------------
Confidence 222111112334578888888876 599999999999999999999999999999975
Q ss_pred CCCceEEEeCCCCccccc-C---------CcEEeC---CCCHHHHHHHHHHHh----cCCHHHHHHHHHHHhhHhhhcCH
Q 004411 465 QKKSVIIVSEFIGCSPSL-S---------GAIRVN---PWNVDAVADAMDSAL----QMENQEKILRHEKHYKYISSHDV 527 (755)
Q Consensus 465 ~~~g~lV~Se~~G~~~~l-~---------~ai~Vn---P~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~v~~~~~ 527 (755)
|+|+|..+|+.+.+ + .|++|. |.|+++++++|.++| .+++.+|..+.++.++....++|
T Consensus 544 ----PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSW 619 (725)
T 3nb0_A 544 ----PSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDW 619 (725)
T ss_dssp ----CEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBH
T ss_pred ----CEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCH
Confidence 89999999998766 2 378884 567777776666665 46776666666667777788999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 004411 528 AYWAKSIDQDLERACRD 544 (755)
Q Consensus 528 ~~W~~~~l~~l~~~~~~ 544 (755)
.+-++.+++..+++...
T Consensus 620 e~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 620 KRMGLEYVKARQLALRR 636 (725)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999888776644
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=9.2e-22 Score=216.65 Aligned_cols=278 Identities=14% Similarity=0.125 Sum_probs=209.4
Q ss_pred HHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHH
Q 004411 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLS 263 (755)
Q Consensus 184 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~ 263 (755)
++..++ |+|++|.+....++.++.+. .+.++.+++|..+|....++.+-.. +-..+-.+|.+.+.+....+.+.+
T Consensus 103 l~~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~ 177 (406)
T 2gek_A 103 IAEGDF--DVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQGI--LRPYHEKIIGRIAVSDLARRWQME 177 (406)
T ss_dssp HHHHCC--SEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHST--THHHHTTCSEEEESSHHHHHHHHH
T ss_pred HHhcCC--CEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHH
Confidence 344455 89999999887665555444 3689999999988765433221110 113456789999999776666553
Q ss_pred HHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccc-cccCCh
Q 004411 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDM-DLFKGI 341 (755)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRl-d~~KGi 341 (755)
. ++ . .++ ++|+|||.+.|.+..... .. .++++|+++||+ .+.||+
T Consensus 178 ~----~~---------------~--~~~-vi~~~v~~~~~~~~~~~~-----------~~~~~~~~i~~~G~~~~~~Kg~ 224 (406)
T 2gek_A 178 A----LG---------------S--DAV-EIPNGVDVASFADAPLLD-----------GYPREGRTVLFLGRYDEPRKGM 224 (406)
T ss_dssp H----HS---------------S--CEE-ECCCCBCHHHHHTCCCCT-----------TCSCSSCEEEEESCTTSGGGCH
T ss_pred h----cC---------------C--CcE-EecCCCChhhcCCCchhh-----------hccCCCeEEEEEeeeCccccCH
Confidence 1 12 1 156 899999998886542110 11 256899999999 999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004411 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (755)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (755)
..+++|+.++.+++|+++ |+++|. +++ ++++ +++.++. ..|.+ .+.++.+++..+|+
T Consensus 225 ~~li~a~~~l~~~~~~~~----l~i~G~-----~~~-~~l~----~~~~~~~--------~~v~~-~g~~~~~~~~~~~~ 281 (406)
T 2gek_A 225 AVLLAALPKLVARFPDVE----ILIVGR-----GDE-DELR----EQAGDLA--------GHLRF-LGQVDDATKASAMR 281 (406)
T ss_dssp HHHHHHHHHHHTTSTTCE----EEEESC-----SCH-HHHH----HHTGGGG--------GGEEE-CCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeE----EEEEcC-----CcH-HHHH----HHHHhcc--------CcEEE-EecCCHHHHHHHHH
Confidence 999999999998888776 887773 333 3333 3333221 13665 56999999999999
Q ss_pred hCcEEEEcCC-CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHH
Q 004411 422 IAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (755)
Q Consensus 422 ~ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A 497 (755)
.||++|+||. .||||++++|||+||. |+|+|..+|..+.+. .|++++|.|+++++
T Consensus 282 ~adv~v~ps~~~e~~~~~~~Ea~a~G~---------------------PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~ 340 (406)
T 2gek_A 282 SADVYCAPHLGGESFGIVLVEAMAAGT---------------------AVVASDLDAFRRVLADGDAGRLVPVDDADGMA 340 (406)
T ss_dssp HSSEEEECCCSCCSSCHHHHHHHHHTC---------------------EEEECCCHHHHHHHTTTTSSEECCTTCHHHHH
T ss_pred HCCEEEecCCCCCCCchHHHHHHHcCC---------------------CEEEecCCcHHHHhcCCCceEEeCCCCHHHHH
Confidence 9999999997 9999999999999975 899999988888874 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHHHHh
Q 004411 498 DAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRD 544 (755)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 544 (755)
++|.++++.+ +.+....++.++++..+++...++.+++-+++....
T Consensus 341 ~~i~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 341 AALIGILEDD-QLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp HHHHHHHHCH-HHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHcCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9999999964 466667778889998999999999999888876543
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=186.27 Aligned_cols=189 Identities=19% Similarity=0.232 Sum_probs=148.8
Q ss_pred EeccCCccccc--ccccCchhHHHHHHHHHHc--CCceEEEEecccc-ccCChHHHHHHHHHHH--HhCCCCCCcEEEEE
Q 004411 294 LPVGIHMGQFE--SIMSLDVTGQKVKELKEKF--DGKIVILGVDDMD-LFKGISLKFLAMGQLL--EQHPDLRGKVVLVQ 366 (755)
Q Consensus 294 ~p~GId~~~f~--~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld-~~KGi~~~l~A~~~ll--~~~P~~~~~vvLvq 366 (755)
+|+|||++.|. +.. ....+....+++++ +++++|+++||+. +.||+..+++|+..+. +++|+++ |++
T Consensus 2 ipngvd~~~f~~~~~~--~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~----l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLT--GSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FII 75 (200)
T ss_dssp ---CCCTTTSSGGGSC--SCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEE----EEE
T ss_pred CCCccChhhccccccc--cchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeE----EEE
Confidence 69999999997 532 11122345677777 3677999999999 9999999999999997 7777655 887
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 367 i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
+|. ++ .+...++.+++.+.+ .|+++.+.++.+++..+|+.||++|+||..||||++++|||+||
T Consensus 76 ~G~-----~~--~~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G 139 (200)
T 2bfw_A 76 IGK-----GD--PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 139 (200)
T ss_dssp ECC-----BC--HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred ECC-----CC--hHHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC
Confidence 774 22 123445666665543 37763679999999999999999999999999999999999997
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh
Q 004411 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (755)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 524 (755)
. |+|+|..+|..+.+. .|++++|.|+++++++|.++++|.+++++.+.++.++++.+
T Consensus 140 ~---------------------PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 140 A---------------------IPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp C---------------------EEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred C---------------------CEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 5 899999999888882 58999999999999999999997677777777778877765
Q ss_pred c
Q 004411 525 H 525 (755)
Q Consensus 525 ~ 525 (755)
+
T Consensus 199 f 199 (200)
T 2bfw_A 199 F 199 (200)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-20 Score=202.62 Aligned_cols=244 Identities=10% Similarity=-0.018 Sum_probs=184.2
Q ss_pred HHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHH
Q 004411 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFL 262 (755)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl 262 (755)
+++..++ |+|++|.++..++. .+..+.| .+++|..++... .+|.|.+.+....+.+.
T Consensus 79 ~l~~~~~--Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~~ 135 (342)
T 2iuy_A 79 WLRTADV--DVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHCG 135 (342)
T ss_dssp HHHHCCC--SEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHTT
T ss_pred HHHhcCC--CEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHHh
Confidence 3344455 99999998765432 3345788 899999876421 18888888876554432
Q ss_pred HHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChH
Q 004411 263 SSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGIS 342 (755)
Q Consensus 263 ~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~ 342 (755)
+ ..++.++|+|||++.|.+... ...++++|+++||+.+.||+.
T Consensus 136 ~------------------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~ 178 (342)
T 2iuy_A 136 G------------------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGAL 178 (342)
T ss_dssp C------------------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHH
T ss_pred c------------------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHH
Confidence 1 013567899999998865321 124567899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHh
Q 004411 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI 422 (755)
Q Consensus 343 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ 422 (755)
.+++|++++ +++ |+++|. ++.. +++++++++++ . .|+| .|.++.+++..+|+.
T Consensus 179 ~li~a~~~~-----~~~----l~i~G~-----g~~~----~~l~~~~~~~~---~-----~v~~-~g~~~~~~l~~~~~~ 231 (342)
T 2iuy_A 179 EAAAFAHAC-----GRR----LVLAGP-----AWEP----EYFDEITRRYG---S-----TVEP-IGEVGGERRLDLLAS 231 (342)
T ss_dssp HHHHHHHHH-----TCC----EEEESC-----CCCH----HHHHHHHHHHT---T-----TEEE-CCCCCHHHHHHHHHH
T ss_pred HHHHHHHhc-----CcE----EEEEeC-----cccH----HHHHHHHHHhC---C-----CEEE-eccCCHHHHHHHHHh
Confidence 999999986 344 887773 3332 33445555543 1 3775 578999999999999
Q ss_pred CcEEEEcCC----------CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-C----CcEE
Q 004411 423 AECCVVNCV----------RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S----GAIR 487 (755)
Q Consensus 423 ADv~vvtS~----------~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~----~ai~ 487 (755)
||++|+||. .|||+++++|||+||. |+|+|..+|..+.+ . .|++
T Consensus 232 adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~---------------------PvI~s~~~~~~e~~~~~~~~~g~~ 290 (342)
T 2iuy_A 232 AHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT---------------------PVVGTGNGCLAEIVPSVGEVVGYG 290 (342)
T ss_dssp CSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC---------------------CEEECCTTTHHHHGGGGEEECCSS
T ss_pred CCEEEECCcccccccccccccCccHHHHHHHhcCC---------------------CEEEcCCCChHHHhcccCCCceEE
Confidence 999999999 8999999999999975 89999999988888 3 4899
Q ss_pred eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHHHHHHHHHHh
Q 004411 488 VNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLERACRD 544 (755)
Q Consensus 488 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~~ 544 (755)
++| |++++|++|.++++ .++.++++ ..+++...++++++-++++.+.
T Consensus 291 ~~~-d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 291 TDF-APDEARRTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAG 338 (342)
T ss_dssp SCC-CHHHHHHHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTT
T ss_pred cCC-CHHHHHHHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHcc
Confidence 999 99999999999987 23455666 6789999999999888876543
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.7e-21 Score=208.57 Aligned_cols=227 Identities=14% Similarity=0.161 Sum_probs=176.0
Q ss_pred hCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--
Q 004411 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-- 323 (755)
Q Consensus 246 ~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 323 (755)
.+|.|.+.+....+.|.+. +|.. ..++.++|+|||.+.|.+.... .....+++++
T Consensus 136 ~~d~ii~~s~~~~~~~~~~----~~~~---------------~~~~~vi~ngv~~~~~~~~~~~----~~~~~~~~~~~~ 192 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQKH----YQTE---------------PERFQILPPGIYPDRKYSEQIP----NSREIYRQKNGI 192 (374)
T ss_dssp CCCEEEESCHHHHHHHHHH----HCCC---------------GGGEEECCCCCCGGGSGGGSCT----THHHHHHHHTTC
T ss_pred CCcEEEEcCHHHHHHHHHH----hCCC---------------hhheEEecCCcCHHhcCcccch----hHHHHHHHHhCC
Confidence 5899999998877776542 2322 1256789999999988764321 1234566766
Q ss_pred -CCceEEEEeccccccCChHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004411 324 -DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ-HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (755)
Q Consensus 324 -~~~~vil~VdRld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~ 401 (755)
.++++|+++||+.+.||+..+++|++.+.++ +|+++ |+++|.. +. +++++++.+.+..
T Consensus 193 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~g-----~~-----~~~~~~~~~~~~~------ 252 (374)
T 2iw1_A 193 KEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTL----LFVVGQD-----KP-----RKFEALAEKLGVR------ 252 (374)
T ss_dssp CTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEE----EEEESSS-----CC-----HHHHHHHHHHTCG------
T ss_pred CCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceE----EEEEcCC-----CH-----HHHHHHHHHcCCC------
Confidence 4678999999999999999999999988766 45544 8888742 21 2344555554321
Q ss_pred ccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc
Q 004411 402 EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481 (755)
Q Consensus 402 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 481 (755)
..|.+++ + .+++..+|+.||++|+||..||||++++|||+||. |+|+|..+|..+.
T Consensus 253 ~~v~~~g-~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~---------------------Pvi~~~~~~~~e~ 308 (374)
T 2iw1_A 253 SNVHFFS-G--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL---------------------PVLTTAVCGYAHY 308 (374)
T ss_dssp GGEEEES-C--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC---------------------CEEEETTSTTTHH
T ss_pred CcEEECC-C--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCCC---------------------CEEEecCCCchhh
Confidence 1377765 3 67899999999999999999999999999999975 8999999999888
Q ss_pred c---CCcEEeC-CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHH
Q 004411 482 L---SGAIRVN-PWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 482 l---~~ai~Vn-P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (755)
+ ..|++++ |.|++++|++|.++++. ++.++...++.++++.++++..|++.+.+-++.
T Consensus 309 i~~~~~g~~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 309 IADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp HHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred hccCCceEEeCCCCCHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 8 3689998 99999999999999995 456777778889999999999999988877653
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.1e-18 Score=165.21 Aligned_cols=162 Identities=12% Similarity=0.040 Sum_probs=122.1
Q ss_pred ceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEE
Q 004411 326 KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIV 405 (755)
Q Consensus 326 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~ 405 (755)
+.+|+++||+.+.||+..+++|+.++ +++|+ +.|+++|. ++.. +++.+++.+.+. .|.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~G~-----g~~~----~~~~~~~~~~~~--------~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLKGK-----GPDE----KKIKLLAQKLGV--------KAE 59 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEECC-----STTH----HHHHHHHHHHTC--------EEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEEeC-----CccH----HHHHHHHHHcCC--------eEE
Confidence 56899999999999999999999986 44454 44888873 3433 344455544432 244
Q ss_pred EecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeC-CCCcccccC-
Q 004411 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE-FIGCSPSLS- 483 (755)
Q Consensus 406 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~- 483 (755)
+ +.++.+++..+|+.||++|+||..||||++++|||+||. -|+|++. .+|..+.+.
T Consensus 60 -~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~--------------------vPvi~~~~~~~~~~~~~~ 117 (166)
T 3qhp_A 60 -F-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVGI--------------------VPVIANSPLSATRQFALD 117 (166)
T ss_dssp -C-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTC--------------------CEEEECCTTCGGGGGCSS
T ss_pred -E-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCC--------------------CcEEeeCCCCchhhhccC
Confidence 4 899999999999999999999999999999999999952 1677744 555555554
Q ss_pred CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHH
Q 004411 484 GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAK 532 (755)
Q Consensus 484 ~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 532 (755)
++.+++|.|+++++++|.++++. ++.+....++.++++.++++..+++
T Consensus 118 ~~~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 118 ERSLFEPNNAKDLSAKIDWWLEN-KLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp GGGEECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHC------
T ss_pred CceEEcCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHCChhhhhc
Confidence 57799999999999999999995 4566777777888888888777654
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.7e-17 Score=182.32 Aligned_cols=160 Identities=10% Similarity=0.055 Sum_probs=122.2
Q ss_pred EEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccc-cccCChHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 004411 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDM-DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQIT 368 (755)
Q Consensus 290 ~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRl-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 368 (755)
.+.++|+|+|.+.|.... ....+++.|+++||+ .+.||+..+|+||+.+.+++|+. .++.|+++|
T Consensus 218 ~~~~i~~g~d~~~~~~~~-------------~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYIN-------------DKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTTT-------------SCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhcccc-------------cccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 467789999988664310 012356688999996 68999999999999999888862 124488888
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccC
Q 004411 369 NPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQG 448 (755)
Q Consensus 369 ~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~ 448 (755)
.... . .+.+.. ..|+|+ |.++.+|+.++|+.||+||+||..||||++++||||||.
T Consensus 284 ~~~~-~-------------------~~l~~~--~~v~f~-G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~- 339 (413)
T 2x0d_A 284 EKHK-D-------------------IALGKG--IHLNSL-GKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGL- 339 (413)
T ss_dssp SCCC-C-------------------EEEETT--EEEEEE-ESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTC-
T ss_pred CCch-h-------------------hhcCCc--CcEEEc-CCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCC-
Confidence 4321 0 011211 146655 689999999999999999999999999999999999974
Q ss_pred CCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcCCH
Q 004411 449 SPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMEN 508 (755)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~~ 508 (755)
|+|++ .+|+.+.+. +|++|+|.|++++|++|.++++++.
T Consensus 340 --------------------PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 340 --------------------RVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN 381 (413)
T ss_dssp --------------------EEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC
T ss_pred --------------------cEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH
Confidence 77775 457777663 5899999999999999999998653
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-16 Score=173.95 Aligned_cols=280 Identities=14% Similarity=0.153 Sum_probs=176.3
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHh-h-hCCEEEEeCHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL-L-NSDLIGFHTFDYAR 259 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~l-l-~~Dligf~t~~~~~ 259 (755)
++++..+| |+|++|+.....++..+-.+..++|+.++.|... +...+. ++...+.+.+ . .+|.+...+....+
T Consensus 80 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~ 154 (384)
T 1vgv_A 80 PILAEFKP--DVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQ 154 (384)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHH
T ss_pred HHHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccC--CCchHhhHHHHHhhccEEEcCcHHHHH
Confidence 34455577 8999997533333433333345788887766432 211111 2223333333 2 38999888887766
Q ss_pred HHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccC-CcccccccccCchhHHHHHHHHHHcC----Cc-eEEEEec
Q 004411 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGI-HMGQFESIMSLDVTGQKVKELKEKFD----GK-IVILGVD 333 (755)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GI-d~~~f~~~~~~~~~~~~~~~lr~~~~----~~-~vil~Vd 333 (755)
.|.. .|+.. .++.++|+|+ |...+.+... +.......+++++++ ++ .+++++|
T Consensus 155 ~l~~-----~g~~~---------------~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~g 213 (384)
T 1vgv_A 155 NLLR-----ENVAD---------------SRIFITGNTVIDALLWVRDQV-MSSDKLRSELAANYPFIDPDKKMILVTGH 213 (384)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHHHHT-TTCHHHHHHHHTTCTTCCTTSEEEEEECC
T ss_pred HHHH-----cCCCh---------------hhEEEeCChHHHHHHhhhhcc-ccchhhhHHHHHhccccCCCCCEEEEEeC
Confidence 6642 24321 1356788884 4332221100 000001134555532 33 5788999
Q ss_pred ccccc-CChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCC
Q 004411 334 DMDLF-KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS 412 (755)
Q Consensus 334 Rld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~ 412 (755)
|+.+. ||+..+++|+.++.+++|+++ |++++++ ++ +++++++++++. . ..|.++ +.++
T Consensus 214 r~~~~~kg~~~li~a~~~l~~~~~~~~----l~i~~g~----~~---~~~~~l~~~~~~----~-----~~v~~~-g~~~ 272 (384)
T 1vgv_A 214 RRESFGRGFEEICHALADIATTHQDIQ----IVYPVHL----NP---NVREPVNRILGH----V-----KNVILI-DPQE 272 (384)
T ss_dssp CBSSCCHHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHHTT----C-----TTEEEE-CCCC
T ss_pred CccccchHHHHHHHHHHHHHhhCCCeE----EEEEcCC----CH---HHHHHHHHHhhc----C-----CCEEEe-CCCC
Confidence 99987 999999999999999888764 6554322 22 234455554321 1 147765 5778
Q ss_pred hhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCC-CCccccc--CCcEEeC
Q 004411 413 TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-IGCSPSL--SGAIRVN 489 (755)
Q Consensus 413 ~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l--~~ai~Vn 489 (755)
.+++..+|+.||++|.|| |.+.+|||+||. |+|+|.. +|+.+.+ +.|++|+
T Consensus 273 ~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~---------------------PvI~~~~~~~~~e~v~~g~g~lv~ 326 (384)
T 1vgv_A 273 YLPFVWLMNHAWLILTDS-----GGIQEEAPSLGK---------------------PVLVMRDTTERPEAVTAGTVRLVG 326 (384)
T ss_dssp HHHHHHHHHHCSEEEESS-----STGGGTGGGGTC---------------------CEEEESSCCSCHHHHHHTSEEEEC
T ss_pred HHHHHHHHHhCcEEEECC-----cchHHHHHHcCC---------------------CEEEccCCCCcchhhhCCceEEeC
Confidence 899999999999999999 445899999975 8899987 6766666 3589998
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHH
Q 004411 490 PWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (755)
Q Consensus 490 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (755)
| |++++|++|.++++++ +.++.+.++.+++...+++.+.++.+.+
T Consensus 327 ~-d~~~la~~i~~ll~d~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (384)
T 1vgv_A 327 T-DKQRIVEEVTRLLKDE-NEYQAMSRAHNPYGDGQACSRILEALKN 371 (384)
T ss_dssp S-SHHHHHHHHHHHHHCH-HHHHHHHSSCCTTCCSCHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHhCh-HHHhhhhhccCCCcCCCHHHHHHHHHHH
Confidence 8 9999999999999854 4555555556666666666666555443
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.72 E-value=4.8e-17 Score=177.22 Aligned_cols=274 Identities=16% Similarity=0.143 Sum_probs=176.8
Q ss_pred HHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhh--hCCEEEEeCHHHHHH
Q 004411 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL--NSDLIGFHTFDYARH 260 (755)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll--~~Dligf~t~~~~~~ 260 (755)
+++..+| |+|++|......++..+..+..++|+.++.|.. .+...+. ++...+.+.++ .+|.+...+....+.
T Consensus 90 ~l~~~~p--Dvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 164 (375)
T 3beo_A 90 VMKEAKP--DIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-RTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATN 164 (375)
T ss_dssp HHHHHCC--SEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-ccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHH
Confidence 3444576 899999764333332222223467887665532 2212221 23344555443 389998888877666
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEecc-CCcccccccccCchhHHHHHHHHHHcC-CceEEEEecccccc
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVG-IHMGQFESIMSLDVTGQKVKELKEKFD-GKIVILGVDDMDLF 338 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~G-Id~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~VdRld~~ 338 (755)
+.+ .|+. ..++.++|+| +|...+.+..... .++++++. ++.+++++||+.+.
T Consensus 165 ~~~-----~g~~---------------~~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~~ 218 (375)
T 3beo_A 165 LQK-----ENKD---------------ESRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRRENL 218 (375)
T ss_dssp HHH-----TTCC---------------GGGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGGT
T ss_pred HHH-----cCCC---------------cccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEecccccc
Confidence 543 2322 1146678999 8877664321110 12444453 44567789999986
Q ss_pred -CChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004411 339 -KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (755)
Q Consensus 339 -KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 417 (755)
||+..+++|++++.+++|+++ ++. +. +++ .+++++++++++ . . ..|+++ +.++..++.
T Consensus 219 ~K~~~~li~a~~~l~~~~~~~~----~i~-~~-----g~~-~~~~~~~~~~~~---~-~-----~~v~~~-g~~~~~~~~ 277 (375)
T 3beo_A 219 GEPMRNMFRAIKRLVDKHEDVQ----VVY-PV-----HMN-PVVRETANDILG---D-Y-----GRIHLI-EPLDVIDFH 277 (375)
T ss_dssp THHHHHHHHHHHHHHHHCTTEE----EEE-EC-----CSC-HHHHHHHHHHHT---T-C-----TTEEEE-CCCCHHHHH
T ss_pred hhHHHHHHHHHHHHHhhCCCeE----EEE-eC-----CCC-HHHHHHHHHHhh---c-c-----CCEEEe-CCCCHHHHH
Confidence 999999999999988888764 443 31 121 234455555431 1 0 137755 578888999
Q ss_pred HHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCC-CCccccc-C-CcEEeCCCCHH
Q 004411 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-IGCSPSL-S-GAIRVNPWNVD 494 (755)
Q Consensus 418 aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l-~-~ai~VnP~d~~ 494 (755)
.+|+.||++|+|| |.+++|||+||. |+|+|.. +|..+.+ . +|++|+| |++
T Consensus 278 ~~~~~ad~~v~~s-----g~~~lEA~a~G~---------------------Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~ 330 (375)
T 3beo_A 278 NVAARSYLMLTDS-----GGVQEEAPSLGV---------------------PVLVLRDTTERPEGIEAGTLKLAGT-DEE 330 (375)
T ss_dssp HHHHTCSEEEECC-----HHHHHHHHHHTC---------------------CEEECSSCCSCHHHHHTTSEEECCS-CHH
T ss_pred HHHHhCcEEEECC-----CChHHHHHhcCC---------------------CEEEecCCCCCceeecCCceEEcCC-CHH
Confidence 9999999999999 566999999975 8888864 7776666 3 5899987 999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHH
Q 004411 495 AVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (755)
Q Consensus 495 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (755)
++|++|.++++.+ +.++.+.++.+++...+++.+.++.+.+
T Consensus 331 ~la~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 331 TIFSLADELLSDK-EAHDKMSKASNPYGDGRASERIVEAILK 371 (375)
T ss_dssp HHHHHHHHHHHCH-HHHHHHCCCCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCh-HhHhhhhhcCCCCCCCcHHHHHHHHHHH
Confidence 9999999999854 4555555556666666666666655543
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=7.4e-17 Score=179.40 Aligned_cols=168 Identities=11% Similarity=0.079 Sum_probs=128.1
Q ss_pred EEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 004411 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN 369 (755)
Q Consensus 290 ~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 369 (755)
++.++|+|||.+.|.+.... ...++++|++|||+.+.||+ ++.+.+++|+++ |+++|.
T Consensus 198 ~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~----l~ivG~ 255 (406)
T 2hy7_A 198 NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVT----FHVIGS 255 (406)
T ss_dssp TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEE----EEEESC
T ss_pred CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHHHhCCCeE----EEEEeC
Confidence 68889999999988643111 12345899999999999999 555666788765 888873
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeee------
Q 004411 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYT------ 443 (755)
Q Consensus 370 p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~------ 443 (755)
|+ ++ +.+.. ..|+|+ |.++.+++.++|+.||+||+||..|||+++.+|||
T Consensus 256 -----g~------------~~----~~~l~--~~V~f~-G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eY 311 (406)
T 2hy7_A 256 -----GM------------GR----HPGYG--DNVIVY-GEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQY 311 (406)
T ss_dssp -----SS------------CC----CTTCC--TTEEEE-CCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHH
T ss_pred -----ch------------HH----hcCCC--CCEEEc-CCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHH
Confidence 22 11 11211 137765 68999999999999999999999999999999999
Q ss_pred -ecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEE-eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhH
Q 004411 444 -VSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIR-VNPWNVDAVADAMDSALQMENQEKILRHEKHYKY 521 (755)
Q Consensus 444 -a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~-VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 521 (755)
|||. |+|+|+. ..+ -.+|++ |+|.|++++|++|.++++++. +++
T Consensus 312 la~G~---------------------PVIas~~--v~~-~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~~~ 357 (406)
T 2hy7_A 312 DFFGL---------------------PAVCPNA--VVG-PYKSRFGYTPGNADSVIAAITQALEAPR----------VRY 357 (406)
T ss_dssp HHHTC---------------------CEEEEGG--GTC-SCSSEEEECTTCHHHHHHHHHHHHHCCC----------CCC
T ss_pred hhCCC---------------------cEEEehh--ccc-CcceEEEeCCCCHHHHHHHHHHHHhCcc----------hhh
Confidence 9975 8899887 111 125889 999999999999999999875 144
Q ss_pred hhhcCHHHHHHHHHHH
Q 004411 522 ISSHDVAYWAKSIDQD 537 (755)
Q Consensus 522 v~~~~~~~W~~~~l~~ 537 (755)
...++|...++++++.
T Consensus 358 ~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 358 RQCLNWSDTTDRVLDP 373 (406)
T ss_dssp SCCCBHHHHHHHHHCG
T ss_pred hhcCCHHHHHHHHHHh
Confidence 5678888888877654
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-16 Score=154.80 Aligned_cols=141 Identities=16% Similarity=0.159 Sum_probs=112.7
Q ss_pred CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004411 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~p 403 (755)
.++++|+++||+.+.||+..+++|++++ |+++ |+++|... +.++ +.+++.++..... ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~----l~i~G~~~-----~~~~----l~~~~~~~~~~l~----~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS-----KGDH----AERYARKIMKIAP----DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC-----TTST----HHHHHHHHHHHSC----TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCcE----EEEEecCc-----cHHH----HHHHHHhhhcccC----Cc
Confidence 4678899999999999999999999876 6665 88787432 2122 3334441111111 13
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (755)
|.++ +.++.+++..+|+.||++++||..||||++++|||+||. |+|+|..+|..+.+.
T Consensus 80 v~~~-g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~---------------------PvI~~~~~~~~e~i~ 137 (177)
T 2f9f_A 80 VKFL-GSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK---------------------PVIAVNEGGFKETVI 137 (177)
T ss_dssp EEEE-ESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC---------------------CEEEESSHHHHHHCC
T ss_pred EEEe-CCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC---------------------cEEEeCCCCHHHHhc
Confidence 6655 689999999999999999999999999999999999975 899999988888773
Q ss_pred ---CcEEeCCCCHHHHHHHHHHHhcCCH
Q 004411 484 ---GAIRVNPWNVDAVADAMDSALQMEN 508 (755)
Q Consensus 484 ---~ai~VnP~d~~~~A~ai~~aL~m~~ 508 (755)
.|+++ |.|+++++++|.++++++.
T Consensus 138 ~~~~g~~~-~~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 138 NEKTGYLV-NADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp BTTTEEEE-CSCHHHHHHHHHHHHHCTT
T ss_pred CCCccEEe-CCCHHHHHHHHHHHHhCHH
Confidence 58999 9999999999999999876
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.63 E-value=7e-16 Score=159.00 Aligned_cols=159 Identities=21% Similarity=0.289 Sum_probs=113.6
Q ss_pred ceEEEecCCCcCCCCCC--CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCC
Q 004411 585 SRLILLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNS 662 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~--~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~ 662 (755)
+|+|++||||||++... ....++++++++|++|+++ + .|+|+|||++..+.+++..+ +++|++||++++.. +
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~-g-~v~iaTGR~~~~~~~~~~~l--~~~I~~nGa~i~~~--~ 74 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKER-F-DTYIVTGRSPEEISRFLPLD--INMICYHGACSKIN--G 74 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH-S-EEEEECSSCHHHHHHHSCSS--CEEEEGGGTEEEET--T
T ss_pred CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcC-C-CEEEEeCCCHHHHHHHhccc--hheEEECCEEEeeC--C
Confidence 48999999999998532 3557899999999999975 7 99999999999999999876 68999999999873 2
Q ss_pred ceeEccc-CcCccH-HHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEEecC
Q 004411 663 AWEICSL-TRDFDW-KEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQ 740 (755)
Q Consensus 663 ~w~~~~~-~~~~~w-~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~sG~ 740 (755)
.+..... -....+ .+.+.++++... ..++.+++.++..+.++|+..++ +.....+++.+.+.+. . .+.+.+|.
T Consensus 75 ~~~~~~~~~~~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~--~~~~~~~~ 149 (239)
T 1u02_A 75 QIVYNNGSDRFLGVFDRIYEDTRSWVS-DFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEIARI-F--GVETYYGK 149 (239)
T ss_dssp EEEECTTGGGGHHHHHHHHHHHTTHHH-HSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHHHHH-H--TCEEEECS
T ss_pred eeeecccccccchhhHHHHHHHHHHHh-hCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHHhcc-C--CcEEEeCC
Confidence 3321000 001222 244555555433 34678899888888899987643 2222344555555543 2 35678999
Q ss_pred eEEEEEeCCCCCCC
Q 004411 741 HIVEVKPQVCQHQS 754 (755)
Q Consensus 741 ~~VEV~p~gvnKG~ 754 (755)
.++||+|+++|||+
T Consensus 150 ~~lei~~~~~~Kg~ 163 (239)
T 1u02_A 150 MIIELRVPGVNKGS 163 (239)
T ss_dssp SEEEEECTTCCHHH
T ss_pred cEEEEEcCCCCHHH
Confidence 99999999999984
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.6e-15 Score=173.47 Aligned_cols=200 Identities=11% Similarity=0.047 Sum_probs=149.7
Q ss_pred EEEEEEeccCCcccccccccCchhHHHHHHHHHHc--CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEE
Q 004411 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (755)
Q Consensus 289 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (755)
.++.++|+++++....+.... ...|+++ ++.++++++||+.+ ||+..+++|+.++++++|+++ |++
T Consensus 344 ~~i~~ipn~~~~~~~~~~~~~-------~~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i 411 (568)
T 2vsy_A 344 EHVLRLQGAFQPSDTSRVVAE-------PPSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWL 411 (568)
T ss_dssp SEEEECSSCSCCCCTTCCCCC-------CCCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEE
T ss_pred ceeEcCCCcCCCCCCCCCCCC-------CCCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEE
Confidence 367788986554322111000 0123344 34557789999999 999999999999999999876 887
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 367 i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
+|. +++.. +++++++.+.+.. ...|+|+ |.++.+++.++|+.|||||+||.+ |||++++|||+||
T Consensus 412 ~G~----~g~~~----~~l~~~~~~~~l~-----~~~v~~~-g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G 476 (568)
T 2vsy_A 412 LSG----PGEAD----ARLRAFAHAQGVD-----AQRLVFM-PKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTG 476 (568)
T ss_dssp ECC----STTHH----HHHHHHHHHTTCC-----GGGEEEE-CCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTT
T ss_pred ecC----CHHHH----HHHHHHHHHcCCC-----hhHEEee-CCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCC
Confidence 773 23333 4455555543321 0137755 689999999999999999999999 9999999999997
Q ss_pred cCCCccccccCCCCCCCCCCCceEEE-------eCCC-------CcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHH
Q 004411 447 QGSPVLDRALGVDEKNPPQKKSVIIV-------SEFI-------GCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKI 512 (755)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~-------Se~~-------G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~ 512 (755)
. |+|+ |..+ |+.+.+.+ |+++++++|.++++++ +.+.
T Consensus 477 ~---------------------Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~-------~~~~la~~i~~l~~~~-~~~~ 527 (568)
T 2vsy_A 477 C---------------------PVLTTPGETFAARVAGSLNHHLGLDEMNVA-------DDAAFVAKAVALASDP-AALT 527 (568)
T ss_dssp C---------------------CEEBCCCSSGGGSHHHHHHHHHTCGGGBCS-------SHHHHHHHHHHHHHCH-HHHH
T ss_pred C---------------------CEEeccCCCchHHHHHHHHHHCCChhhhcC-------CHHHHHHHHHHHhcCH-HHHH
Confidence 5 8899 9988 88877643 9999999999999864 4566
Q ss_pred HHHHHHhhHh---hhcCHHHHHHHHHHHHHHHHHh
Q 004411 513 LRHEKHYKYI---SSHDVAYWAKSIDQDLERACRD 544 (755)
Q Consensus 513 ~r~~~~~~~v---~~~~~~~W~~~~l~~l~~~~~~ 544 (755)
...++.++++ ..+++...++.+.+-+++..+.
T Consensus 528 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 528 ALHARVDVLRRASGVFHMDGFADDFGALLQALARR 562 (568)
T ss_dssp HHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6667788888 6689999999998888877654
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-14 Score=150.38 Aligned_cols=167 Identities=18% Similarity=0.130 Sum_probs=110.3
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC-C--CCceEEcCCceEEEecC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG-V--EKLGLSAEHGYFTRWSK 660 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~-i--~~l~liaenGa~i~~~~ 660 (755)
++|+|++|+||||++ .+..++++++++|++|.+ +|+.|+|+|||++..+.+.++. + ...++|++||+.++..+
T Consensus 3 ~~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~-~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~~ 78 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTP---PRLCQTDEMRALIKRARG-AGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRNG 78 (246)
T ss_dssp CSEEEEECSBTTTBS---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEETT
T ss_pred CceEEEEeCcCCcCC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEECC
Confidence 479999999999998 466789999999999997 5899999999999999998873 1 11368999999999864
Q ss_pred CCceeEccc-CcCccHHHHHHHHHHHH-----hcCCCCcEEeecceEEEEE--eccCCC----Ccc---hh--hHHHHHH
Q 004411 661 NSAWEICSL-TRDFDWKEIAEPVMKLY-----TETTDGSFIEDKETAIVWH--HQHADP----HFG---SC--QAKELLD 723 (755)
Q Consensus 661 ~~~w~~~~~-~~~~~w~~~v~~i~~~y-----~~~t~gs~iE~k~~~l~~h--yr~ad~----~~~---~~--qa~el~~ 723 (755)
+..|....+ ..+..+...+.+.++.+ .....+.|++.+...+.+. .+.... ++. .. ...++.+
T Consensus 79 ~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (246)
T 3f9r_A 79 LEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIA 158 (246)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred EEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEecccchHHHHHHH
Confidence 333443210 01222222222222222 1345678888776655442 111110 010 11 1245666
Q ss_pred HHHHHhcCCCeE-EEecCeEEEEEeCCCCCCC
Q 004411 724 HLENVLANEPVV-VKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 724 ~L~~~l~~~~~~-V~sG~~~VEV~p~gvnKG~ 754 (755)
.|.+.+.+..+. +.+|..++||+|+|+|||+
T Consensus 159 ~l~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~ 190 (246)
T 3f9r_A 159 ELENSFPDFGLKYSIGGQISFDVFPVGWDKTY 190 (246)
T ss_dssp HHHHHCGGGCEEEEEETTTEEEEEETTCSGGG
T ss_pred HHHhhCcCCcEEEEecCCeEEEEEeCCCCHHH
Confidence 777776664455 5699999999999999995
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-14 Score=157.90 Aligned_cols=251 Identities=15% Similarity=0.137 Sum_probs=155.9
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHh--hhCCEEEEeCHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL--LNSDLIGFHTFDYAR 259 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~l--l~~Dligf~t~~~~~ 259 (755)
++++..+| |+|++|++....++..+..+..++|+. ..|.++.+...+. ++.....+.+ ..+|.+...+....+
T Consensus 85 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~ 159 (376)
T 1v4v_A 85 RALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKA 159 (376)
T ss_dssp HHHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEeCChHHHHHHHHHHHHhCCCEE-EEeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHH
Confidence 34455566 899999876555554333333467875 4554443222221 2223333332 237888888877666
Q ss_pred HHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEecc-CCcccccccccCchhHHHHHHHHHHcC-CceEEEEeccccc
Q 004411 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVG-IHMGQFESIMSLDVTGQKVKELKEKFD-GKIVILGVDDMDL 337 (755)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~G-Id~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~VdRld~ 337 (755)
.|.+ .|+. ..+|.++|++ +|...+... ..+++++++ ++.+++++||+..
T Consensus 160 ~l~~-----~g~~---------------~~ki~vi~n~~~d~~~~~~~---------~~~~~~~~~~~~~vl~~~gr~~~ 210 (376)
T 1v4v_A 160 NLLK-----EGKR---------------EEGILVTGQTGVDAVLLAAK---------LGRLPEGLPEGPYVTVTMHRREN 210 (376)
T ss_dssp HHHT-----TTCC---------------GGGEEECCCHHHHHHHHHHH---------HCCCCTTCCSSCEEEECCCCGGG
T ss_pred HHHH-----cCCC---------------cceEEEECCchHHHHhhhhh---------hhHHHHhcCCCCEEEEEeCcccc
Confidence 6542 1322 1135566665 443322110 011223343 3456778999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004411 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (755)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 417 (755)
.||+..+++|++++.+++|+++ |+.++++ ++ +++++++++++ . . ..|+++ +.++..++.
T Consensus 211 ~k~~~~ll~a~~~l~~~~~~~~----lv~~~g~----~~---~~~~~l~~~~~---~-~-----~~v~~~-g~~g~~~~~ 269 (376)
T 1v4v_A 211 WPLLSDLAQALKRVAEAFPHLT----FVYPVHL----NP---VVREAVFPVLK---G-V-----RNFVLL-DPLEYGSMA 269 (376)
T ss_dssp GGGHHHHHHHHHHHHHHCTTSE----EEEECCS----CH---HHHHHHHHHHT---T-C-----TTEEEE-CCCCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCCeE----EEEECCC----CH---HHHHHHHHHhc---c-C-----CCEEEE-CCCCHHHHH
Confidence 9999999999999988899875 5554322 22 23345555532 1 1 147765 567788999
Q ss_pred HHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeC-CCCcccccC--CcEEeCCCCHH
Q 004411 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE-FIGCSPSLS--GAIRVNPWNVD 494 (755)
Q Consensus 418 aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~--~ai~VnP~d~~ 494 (755)
.+|+.||++|.|| +|+ .+|||+||. |+|++. .+|+.+.+. .|++|+ .|++
T Consensus 270 ~~~~~ad~~v~~S--~g~---~lEA~a~G~---------------------PvI~~~~~~~~~~~~~~g~g~lv~-~d~~ 322 (376)
T 1v4v_A 270 ALMRASLLLVTDS--GGL---QEEGAALGV---------------------PVVVLRNVTERPEGLKAGILKLAG-TDPE 322 (376)
T ss_dssp HHHHTEEEEEESC--HHH---HHHHHHTTC---------------------CEEECSSSCSCHHHHHHTSEEECC-SCHH
T ss_pred HHHHhCcEEEECC--cCH---HHHHHHcCC---------------------CEEeccCCCcchhhhcCCceEECC-CCHH
Confidence 9999999999999 655 779999975 777764 556655552 578886 4999
Q ss_pred HHHHHHHHHhcCCHHHHHHHH
Q 004411 495 AVADAMDSALQMENQEKILRH 515 (755)
Q Consensus 495 ~~A~ai~~aL~m~~~er~~r~ 515 (755)
++|++|.++|+++ +.++.+.
T Consensus 323 ~la~~i~~ll~d~-~~~~~~~ 342 (376)
T 1v4v_A 323 GVYRVVKGLLENP-EELSRMR 342 (376)
T ss_dssp HHHHHHHHHHTCH-HHHHHHH
T ss_pred HHHHHHHHHHhCh-Hhhhhhc
Confidence 9999999999854 3444433
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=8.1e-14 Score=153.18 Aligned_cols=250 Identities=11% Similarity=0.014 Sum_probs=158.4
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHH-hhhCCEEEEeCHHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKS-LLNSDLIGFHTFDYARH 260 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~-ll~~Dligf~t~~~~~~ 260 (755)
++++..+| |+|+++.++++. .++.... . |+.+..+. +.. +. +.+. +-.+|.|..++....+.
T Consensus 105 ~~l~~~~p--Div~~~~~~~~~--~~~~~~~-~-p~~~~~~~-~~~---------~~-~~~~~~~~~d~ii~~S~~~~~~ 167 (374)
T 2xci_A 105 RFEELSKP--KALIVVEREFWP--SLIIFTK-V-PKILVNAY-AKG---------SL-IEKILSKKFDLIIMRTQEDVEK 167 (374)
T ss_dssp HHHHHHCC--SEEEEESCCCCH--HHHHHCC-S-CEEEEEEC-CCC---------CH-HHHHHHTTCSEEEESCHHHHHH
T ss_pred HHHHHhCC--CEEEEECccCcH--HHHHHHh-C-CEEEEEee-cCc---------hH-HHHHHHHhCCEEEECCHHHHHH
Confidence 34455677 899888777653 3333221 1 55443332 211 11 2222 34689999999988777
Q ss_pred HHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCC
Q 004411 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (755)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 340 (755)
|.+ +|+ . +|.++|+|. |..... + ++.+. +++++++++. .||
T Consensus 168 l~~-----~g~----------------~-ki~vi~n~~----f~~~~~-~---------~~~l~-~~vi~~~~~~--~k~ 208 (374)
T 2xci_A 168 FKT-----FGA----------------K-RVFSCGNLK----FICQKG-K---------GIKLK-GEFIVAGSIH--TGE 208 (374)
T ss_dssp HHT-----TTC----------------C-SEEECCCGG----GCCCCC-S---------CCCCS-SCEEEEEEEC--GGG
T ss_pred HHH-----cCC----------------C-eEEEcCCCc----cCCCcC-h---------hhhhc-CCEEEEEeCC--Cch
Confidence 653 121 1 456677762 221110 0 00111 2577777764 589
Q ss_pred hHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC--CCCCccEEEecCCCChhhHHH
Q 004411 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFG--KPGYEPIVIIKEPLSTQDKVP 418 (755)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g--~~~~~pV~~~~~~v~~~el~a 418 (755)
+..+++|+.++.+++|+++ |+++| ++++.. +++++++.+.+..+. ..+...|. +.+ ..+|+..
T Consensus 209 ~~~ll~A~~~l~~~~p~~~----lvivG-----~g~~~~---~~l~~~~~~~gl~~~~~~~~~~~v~-~~~--~~~dl~~ 273 (374)
T 2xci_A 209 VEIILKAFKEIKKTYSSLK----LILVP-----RHIENA---KIFEKKARDFGFKTSFFENLEGDVI-LVD--RFGILKE 273 (374)
T ss_dssp HHHHHHHHHHHHTTCTTCE----EEEEE-----SSGGGH---HHHHHHHHHTTCCEEETTCCCSSEE-ECC--SSSCHHH
T ss_pred HHHHHHHHHHHHhhCCCcE----EEEEC-----CCHHHH---HHHHHHHHHCCCceEEecCCCCcEE-EEC--CHHHHHH
Confidence 9999999999998899876 88777 344421 234445544432210 00001344 333 2579999
Q ss_pred HHHhCcEEEEcC-CCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe-CCCCccccc----CCcEEeCCCC
Q 004411 419 YYAIAECCVVNC-VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EFIGCSPSL----SGAIRVNPWN 492 (755)
Q Consensus 419 ly~~ADv~vvtS-~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l----~~ai~VnP~d 492 (755)
+|+.||++++|| ..|++|++++||||||. |+|++ +..|+.+.+ .+|.++.|.|
T Consensus 274 ~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~---------------------PVI~~~~~~~~~e~~~~~~~~G~l~~~~d 332 (374)
T 2xci_A 274 LYPVGKIAIVGGTFVNIGGHNLLEPTCWGI---------------------PVIYGPYTHKVNDLKEFLEKEGAGFEVKN 332 (374)
T ss_dssp HGGGEEEEEECSSSSSSCCCCCHHHHTTTC---------------------CEEECSCCTTSHHHHHHHHHTTCEEECCS
T ss_pred HHHhCCEEEECCcccCCCCcCHHHHHHhCC---------------------CEEECCCccChHHHHHHHHHCCCEEEeCC
Confidence 999999988876 45778999999999975 77765 567777654 3588899999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhc
Q 004411 493 VDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (755)
++++|++|.++|++ +.++.+.++.++++.++
T Consensus 333 ~~~La~ai~~ll~d--~~r~~mg~~ar~~~~~~ 363 (374)
T 2xci_A 333 ETELVTKLTELLSV--KKEIKVEEKSREIKGCY 363 (374)
T ss_dssp HHHHHHHHHHHHHS--CCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhH--HHHHHHHHHHHHHHHhc
Confidence 99999999999985 46666677778777653
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.8e-14 Score=156.23 Aligned_cols=192 Identities=14% Similarity=0.097 Sum_probs=132.3
Q ss_pred EEEEeccCCcccccccccCchhHHHHHHHHHHc-CCce-EEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 004411 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKI-VILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQIT 368 (755)
Q Consensus 291 i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~-vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 368 (755)
+.++|+|||.+.|.+. .. ..++ .. .+++ +++.+||+.+.||+..+++|++++.+ ++.++.++
T Consensus 156 ~~~i~n~v~~~~~~~~----~~---~~~~--~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~-------~~~~l~i~ 219 (364)
T 1f0k_A 156 AEVVGNPVRTDVLALP----LP---QQRL--AGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD-------SVTIWHQS 219 (364)
T ss_dssp CEECCCCCCHHHHTSC----CH---HHHH--TTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG-------GEEEEEEC
T ss_pred ceEeCCccchhhcccc----hh---hhhc--ccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC-------CcEEEEEc
Confidence 5688999998876431 11 1111 12 3445 55566899999999999999998743 23443333
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccC
Q 004411 369 NPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQG 448 (755)
Q Consensus 369 ~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~ 448 (755)
++ ++ .+ ++.+++.+.+. ..|.++ +.+ +++..+|+.||++|+|| | +++++|||+||.
T Consensus 220 G~----~~-~~----~l~~~~~~~~~-------~~v~~~-g~~--~~~~~~~~~ad~~v~~s---g-~~~~~EAma~G~- 275 (364)
T 1f0k_A 220 GK----GS-QQ----SVEQAYAEAGQ-------PQHKVT-EFI--DDMAAAYAWADVVVCRS---G-ALTVSEIAAAGL- 275 (364)
T ss_dssp CT----TC-HH----HHHHHHHHTTC-------TTSEEE-SCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHTC-
T ss_pred CC----ch-HH----HHHHHHhhcCC-------CceEEe-cch--hhHHHHHHhCCEEEECC---c-hHHHHHHHHhCC-
Confidence 22 22 22 34444444321 136665 455 78999999999999999 4 899999999975
Q ss_pred CCccccccCCCCCCCCCCCceEEEeCCCCccc-------cc---CCcEEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHH
Q 004411 449 SPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP-------SL---SGAIRVNPWN--VDAVADAMDSALQMENQEKILRHE 516 (755)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-------~l---~~ai~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~ 516 (755)
|+|+|..+|... .+ ..|++++|.| ++++|++|.++ .++.++.+.+
T Consensus 276 --------------------Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l---~~~~~~~~~~ 332 (364)
T 1f0k_A 276 --------------------PALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTMAE 332 (364)
T ss_dssp --------------------CEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHHHH
T ss_pred --------------------CEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc---CHHHHHHHHH
Confidence 899999987632 33 2489999988 99999999988 4566777777
Q ss_pred HHhhHhhhcCHHHHHHHHHHHHHHHHHhc
Q 004411 517 KHYKYISSHDVAYWAKSIDQDLERACRDH 545 (755)
Q Consensus 517 ~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 545 (755)
+.++++..+++..-++.+.+.+++..+.|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 333 RARAASIPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHTTC----
T ss_pred HHHHhhccCHHHHHHHHHHHHHHHHHhhc
Confidence 78888888888887887777666654443
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2.9e-13 Score=139.63 Aligned_cols=164 Identities=15% Similarity=0.195 Sum_probs=101.8
Q ss_pred cCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC-C--CCceEEcCCceEEEec
Q 004411 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG-V--EKLGLSAEHGYFTRWS 659 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~-i--~~l~liaenGa~i~~~ 659 (755)
.++|+|++|+||||++ .++.++++++++|++|.+ . +.|+|+|||++..+.+.++. + ..-++|++||+.++..
T Consensus 4 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~~ 78 (246)
T 2amy_A 4 PGPALCLFDVDGTLTA---PRQKITKEMDDFLQKLRQ-K-IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKD 78 (246)
T ss_dssp CCSEEEEEESBTTTBC---TTSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEET
T ss_pred CCceEEEEECCCCcCC---CCcccCHHHHHHHHHHHh-C-CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEeC
Confidence 4689999999999998 456789999999999986 4 89999999999988888862 2 1126899999999875
Q ss_pred CCCceeEccc-CcCccHHHHHHHHHHHHh--------cCCCCcEEeecceEEEEEe--ccCCC----Cc---c--hhhHH
Q 004411 660 KNSAWEICSL-TRDFDWKEIAEPVMKLYT--------ETTDGSFIEDKETAIVWHH--QHADP----HF---G--SCQAK 719 (755)
Q Consensus 660 ~~~~w~~~~~-~~~~~w~~~v~~i~~~y~--------~~t~gs~iE~k~~~l~~hy--r~ad~----~~---~--~~qa~ 719 (755)
++..|....+ ..+ .+.+.++++... ...++.|++.+...+.++. +.... .+ . .....
T Consensus 79 ~~~i~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (246)
T 2amy_A 79 GKLLCRQNIQSHLG---EALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQ 155 (246)
T ss_dssp TEEEEECCHHHHHC---HHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHH
T ss_pred CcEEEeeecccccC---HHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhheeecCCHHHHH
Confidence 3222332100 012 234444443221 2345667655433222211 11100 01 0 01122
Q ss_pred HHHHHHHHHhcCCCeEEE-ecCeEEEEEeCCCCCCC
Q 004411 720 ELLDHLENVLANEPVVVK-RGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 720 el~~~L~~~l~~~~~~V~-sG~~~VEV~p~gvnKG~ 754 (755)
++.+.+.+.+.+..+.+. +|..++||.|+|+|||+
T Consensus 156 ~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~ 191 (246)
T 2amy_A 156 KFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRY 191 (246)
T ss_dssp HHHHHHHHHTTTSCEEEEEETTTEEEEEETTCSGGG
T ss_pred HHHHHHHHhcCCCcEEEEEcCCcEEEEecCCCchHH
Confidence 344556555544346655 68899999999999985
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=2.9e-13 Score=141.21 Aligned_cols=169 Identities=17% Similarity=0.186 Sum_probs=100.5
Q ss_pred HHhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC----C-CCceEEcCC
Q 004411 578 SAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG----V-EKLGLSAEH 652 (755)
Q Consensus 578 ~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~----i-~~l~liaen 652 (755)
.+|+..++|||++|+||||++ .++.++++++++|++|.+ . +.|+|+|||++..+.+.++. + ..-++|++|
T Consensus 6 ~~~~~~~~kli~~DlDGTLl~---~~~~is~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~N 80 (262)
T 2fue_A 6 QAARRKERVLCLFDVDGTLTP---ARQKIDPEVAAFLQKLRS-R-VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAEN 80 (262)
T ss_dssp -------CEEEEEESBTTTBS---TTSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGG
T ss_pred ccccccCeEEEEEeCccCCCC---CCCcCCHHHHHHHHHHHh-C-CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEECC
Confidence 456777899999999999998 456789999999999985 5 89999999999999888864 1 113689999
Q ss_pred ceEEEecCCCceeEcccCcCc-cHHHHHHHHHHHHh--------cCCCCcEEeecceEEEEE-e-ccCCCC-------cc
Q 004411 653 GYFTRWSKNSAWEICSLTRDF-DWKEIAEPVMKLYT--------ETTDGSFIEDKETAIVWH-H-QHADPH-------FG 714 (755)
Q Consensus 653 Ga~i~~~~~~~w~~~~~~~~~-~w~~~v~~i~~~y~--------~~t~gs~iE~k~~~l~~h-y-r~ad~~-------~~ 714 (755)
|+.++..++..+.. ..+. -..+.+.++++... ...++.|++.+...+.+. + +..+.+ +.
T Consensus 81 Ga~i~~~~~~i~~~---~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (262)
T 2fue_A 81 GTVQYKHGRLLSKQ---TIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELD 157 (262)
T ss_dssp GTEEEETTEECCCC---CHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHH
T ss_pred CcEEEeCCeEEEEe---eccccCCHHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcccccccEEEEc
Confidence 99998743212221 1000 01344444443221 223456665433222221 1 111100 00
Q ss_pred --hhhHHHHHHHHHHHhcCCCeEEE-ecCeEEEEEeCCCCCCC
Q 004411 715 --SCQAKELLDHLENVLANEPVVVK-RGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 715 --~~qa~el~~~L~~~l~~~~~~V~-sG~~~VEV~p~gvnKG~ 754 (755)
.....++.+.+.+.+.+..+.+. +|..++||.|+|+|||+
T Consensus 158 ~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~vsKg~ 200 (262)
T 2fue_A 158 KKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRY 200 (262)
T ss_dssp HHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTH
T ss_pred CCHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecCCCCHHH
Confidence 01123444556555544346665 57889999999999994
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.1e-12 Score=138.32 Aligned_cols=167 Identities=19% Similarity=0.217 Sum_probs=103.5
Q ss_pred HHhhccCceEEEecCCCcCCCCCCCCC-CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC-CCceEEcCCceE
Q 004411 578 SAYNKTNSRLILLDYDGTVMPQTSEDK-RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV-EKLGLSAEHGYF 655 (755)
Q Consensus 578 ~~y~~s~~rlI~lD~DGTL~~~~~~~~-~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i-~~l~liaenGa~ 655 (755)
+.|...++|+|++|+||||++ ... .++++++++|++|.+ .+..|+++|||+...+.+++..+ .+.++|+.||+.
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~ 89 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRLID-KGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTV 89 (283)
T ss_dssp -----CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTE
T ss_pred hhhhccCceEEEEeCcCCCCC---CCCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcE
Confidence 578889999999999999998 345 789999999999997 49999999999999999998876 346899999999
Q ss_pred EEecCCCceeEcccCcCccHHHHHHHHHHHHhc----------CCCCcEEeecceEE----------EEEe----ccCC-
Q 004411 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTE----------TTDGSFIEDKETAI----------VWHH----QHAD- 710 (755)
Q Consensus 656 i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~----------~t~gs~iE~k~~~l----------~~hy----r~ad- 710 (755)
+...+...+.. ..+ .+.+.++++.+.+ ...+.|++.....+ .... ....
T Consensus 90 i~~~~~~i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 163 (283)
T 3dao_A 90 VRTPKEILKTY---PMD---EDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDR 163 (283)
T ss_dssp EECSSCEEEEC---CCC---HHHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCC
T ss_pred EEECCEEEEEe---cCC---HHHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCc
Confidence 98753222222 223 2334444433321 22333332111000 0000 0000
Q ss_pred CC------c-chhhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 711 PH------F-GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 711 ~~------~-~~~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
.. + ......++.+.+.+.+.+....+.++..++||.|+++|||.
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~ 214 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWT 214 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHH
Confidence 00 0 11223445556666665433345689999999999999984
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.42 E-value=5.5e-13 Score=140.54 Aligned_cols=168 Identities=13% Similarity=0.090 Sum_probs=100.8
Q ss_pred HHhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEE
Q 004411 578 SAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFT 656 (755)
Q Consensus 578 ~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i 656 (755)
++|+..++|+|++|+||||++ ....+++++.++|++|.+ +|+.|+|+|||+...+.+++..++ +.++|++||+.+
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i 89 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLLTA-RGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARV 89 (285)
T ss_dssp -------CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHT-TTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEE
T ss_pred cccccCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEE
Confidence 589999999999999999998 567789999999999986 599999999999999988886552 356899999999
Q ss_pred EecCCCceeEcccCcCccHHHHHHHHHHHHhcC---------CCCcEEeecceEEEEEec-------cCC------CC--
Q 004411 657 RWSKNSAWEICSLTRDFDWKEIAEPVMKLYTET---------TDGSFIEDKETAIVWHHQ-------HAD------PH-- 712 (755)
Q Consensus 657 ~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~---------t~gs~iE~k~~~l~~hyr-------~ad------~~-- 712 (755)
+...+ ..... ...+ .+.+.++++.+... ..+.|.......+...++ ..+ ..
T Consensus 90 ~~~~~-~~l~~-~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 164 (285)
T 3pgv_A 90 HDSDG-QQIFA-HNLD---RDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGIS 164 (285)
T ss_dssp ECTTS-CEEEE-CCCC---HHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEE
T ss_pred ECCCC-CEEEe-cCCC---HHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCce
Confidence 86433 22211 1222 34556666522111 111111110000000000 000 00
Q ss_pred ------cchhhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 713 ------FGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 713 ------~~~~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
.......++.+.+.+.+.+....+.++..++||.|+++|||.
T Consensus 165 ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~ 212 (285)
T 3pgv_A 165 KVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGH 212 (285)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHH
T ss_pred EEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHH
Confidence 012344566667766665422335688999999999999974
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-11 Score=136.85 Aligned_cols=252 Identities=17% Similarity=0.152 Sum_probs=157.8
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHh--hhCCEEEEeCHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL--LNSDLIGFHTFDYAR 259 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~l--l~~Dligf~t~~~~~ 259 (755)
++++..+| |+|++|+.-...+|..+..+..++|+++ +|.+..+...+ -|+.+++.+.+ ..+|++-..+....+
T Consensus 105 ~~l~~~kP--DvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~~--~~~~~~~~r~~~~~~a~~~~~~se~~~~ 179 (396)
T 3dzc_A 105 QVLSSEQP--DVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNIY--SPWPEEGNRKLTAALTQYHFAPTDTSRA 179 (396)
T ss_dssp HHHHHHCC--SEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCTT--SSTTHHHHHHHHHHTCSEEEESSHHHHH
T ss_pred HHHHhcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCccccccc--cCCcHHHHHHHHHHhcCEEECCCHHHHH
Confidence 34455677 8999998766656655544556788764 33333222222 24556666655 357999899988888
Q ss_pred HHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEec-cCCcccccccccCchhHHHHHHHHHHcC----CceE-EEEec
Q 004411 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPV-GIHMGQFESIMSLDVTGQKVKELKEKFD----GKIV-ILGVD 333 (755)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~-GId~~~f~~~~~~~~~~~~~~~lr~~~~----~~~v-il~Vd 333 (755)
+|.. .|++. .+|.++++ ++|...+..... ........+++++++ ++++ ++..+
T Consensus 180 ~l~~-----~G~~~---------------~ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~h 238 (396)
T 3dzc_A 180 NLLQ-----ENYNA---------------ENIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTGH 238 (396)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECS
T ss_pred HHHH-----cCCCc---------------CcEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEEC
Confidence 8764 34321 12344443 555433321100 000011256677763 3454 45567
Q ss_pred cccc-cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCC
Q 004411 334 DMDL-FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS 412 (755)
Q Consensus 334 Rld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~ 412 (755)
|... .||+..+++|++++.+++|+++ +|.++.+ ++ ++++.++++. + . ...|.++ ++++
T Consensus 239 R~~~~~~~~~~ll~A~~~l~~~~~~~~----~v~~~g~----~~---~~~~~l~~~~---~----~--~~~v~~~-~~lg 297 (396)
T 3dzc_A 239 RRESFGGGFERICQALITTAEQHPECQ----ILYPVHL----NP---NVREPVNKLL---K----G--VSNIVLI-EPQQ 297 (396)
T ss_dssp CBCCCTTHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHT---T----T--CTTEEEE-CCCC
T ss_pred CcccchhHHHHHHHHHHHHHHhCCCce----EEEEeCC----Ch---HHHHHHHHHH---c----C--CCCEEEe-CCCC
Confidence 7654 4889999999999999999865 5544322 12 2334444431 1 1 1247655 5788
Q ss_pred hhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe-CCCCcccccC--CcEEeC
Q 004411 413 TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EFIGCSPSLS--GAIRVN 489 (755)
Q Consensus 413 ~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l~--~ai~Vn 489 (755)
..++..+|+.||++|.+| | |++ .||++||. |+|++ +.++..+.+. .+++|.
T Consensus 298 ~~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~G~---------------------PvV~~~~~~~~~e~v~~G~~~lv~ 351 (396)
T 3dzc_A 298 YLPFVYLMDRAHIILTDS---G-GIQ-EEAPSLGK---------------------PVLVMRETTERPEAVAAGTVKLVG 351 (396)
T ss_dssp HHHHHHHHHHCSEEEESC---S-GGG-TTGGGGTC---------------------CEEECCSSCSCHHHHHHTSEEECT
T ss_pred HHHHHHHHHhcCEEEECC---c-cHH-HHHHHcCC---------------------CEEEccCCCcchHHHHcCceEEcC
Confidence 889999999999999999 6 555 99999975 67777 5666655552 466776
Q ss_pred CCCHHHHHHHHHHHhcCC
Q 004411 490 PWNVDAVADAMDSALQME 507 (755)
Q Consensus 490 P~d~~~~A~ai~~aL~m~ 507 (755)
+ |.++++++|.++|+.+
T Consensus 352 ~-d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 352 T-NQQQICDALSLLLTDP 368 (396)
T ss_dssp T-CHHHHHHHHHHHHHCH
T ss_pred C-CHHHHHHHHHHHHcCH
Confidence 5 8999999999999864
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.35 E-value=9.1e-12 Score=130.31 Aligned_cols=162 Identities=14% Similarity=0.057 Sum_probs=101.8
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC----CceEEcCCceEEEec
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE----KLGLSAEHGYFTRWS 659 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~----~l~liaenGa~i~~~ 659 (755)
++|+|++|+||||++ ....++++++++|++|.+. +..|+++|||++..+.+++..+. ..++|++||+.++..
T Consensus 4 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~ 79 (279)
T 4dw8_A 4 KYKLIVLDLDGTLTN---SKKEISSRNRETLIRIQEQ-GIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINW 79 (279)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEET
T ss_pred cceEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEEC
Confidence 479999999999998 5678899999999999974 99999999999999999887653 367899999999864
Q ss_pred CCCceeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEE----------------EEeccCCCCc----------
Q 004411 660 KNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIV----------------WHHQHADPHF---------- 713 (755)
Q Consensus 660 ~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~----------------~hyr~ad~~~---------- 713 (755)
........ ...+. +.+.++++.+.+..-...+........ ..+... .++
T Consensus 80 ~~~~~~~~-~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~k 154 (279)
T 4dw8_A 80 ESKEMMYE-NVLPN---EVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRET-NDFLTDITLPVAK 154 (279)
T ss_dssp TTCCEEEE-CCCCG---GGHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEEC-SCHHHHSCSCCSC
T ss_pred CCCeEEEE-ecCCH---HHHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccH-HHHHHhhcCCceE
Confidence 22232211 12232 233344443322111111111110000 000000 000
Q ss_pred -----chhhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 714 -----GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 714 -----~~~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
......++.+.+.+.+.+....+.++..++|+.|+++|||.
T Consensus 155 i~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~ 200 (279)
T 4dw8_A 155 CLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKAL 200 (279)
T ss_dssp EEEESCHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHH
T ss_pred EEEeCCHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHH
Confidence 12344566677766665533445688999999999999984
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.35 E-value=8.9e-12 Score=130.36 Aligned_cols=161 Identities=14% Similarity=0.182 Sum_probs=103.2
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHH-HHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecCC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTE-VLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKN 661 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~-~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~~ 661 (755)
+.|+|++|+||||++ .+..++++ ++++|++|.+ .|+.|+|+|||++..+.+++..+. ..++|++||+.++..++
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~ 77 (271)
T 1rlm_A 2 AVKVIVTDMDGTFLN---DAKTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGK 77 (271)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTE
T ss_pred CccEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCe
Confidence 368999999999998 45678888 4999999986 589999999999999999987663 35799999999986432
Q ss_pred CceeEcccCcCccHHHHHHHHHHHHhcCC---------CCcEEeecce------------EEEE--EeccCCCC------
Q 004411 662 SAWEICSLTRDFDWKEIAEPVMKLYTETT---------DGSFIEDKET------------AIVW--HHQHADPH------ 712 (755)
Q Consensus 662 ~~w~~~~~~~~~~w~~~v~~i~~~y~~~t---------~gs~iE~k~~------------~l~~--hyr~ad~~------ 712 (755)
..+.. ..+ .+.+.++++.+.+.. .+.|++.... .+.. .+......
T Consensus 78 ~i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i 151 (271)
T 1rlm_A 78 QLFHG---ELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSL 151 (271)
T ss_dssp EEEEC---CCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEE
T ss_pred EEEEe---cCC---HHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEE
Confidence 12221 222 355666666554321 2333321100 0000 00000000
Q ss_pred -cchhhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 713 -FGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 713 -~~~~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
.....+.++.+++.+.+.+....+.+|..++||.|++++||.
T Consensus 152 ~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~ 194 (271)
T 1rlm_A 152 NLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKAN 194 (271)
T ss_dssp ECCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHH
T ss_pred EcCHHHHHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHH
Confidence 012345667777776555433334578899999999999974
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.32 E-value=7.1e-12 Score=133.36 Aligned_cols=161 Identities=14% Similarity=0.199 Sum_probs=101.9
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHH-HHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecCC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTE-VLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKN 661 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~-~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~~ 661 (755)
..|+|++|+||||++ ....++++ +.++|++|.+ .++.|+++|||+...+.+++..++ ..++|++||+.+...+.
T Consensus 36 ~iKli~fDlDGTLld---~~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~ 111 (304)
T 3l7y_A 36 SVKVIATDMDGTFLN---SKGSYDHNRFQRILKQLQE-RDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQ 111 (304)
T ss_dssp CCSEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHH-TTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETTE
T ss_pred eeEEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECCE
Confidence 589999999999998 45667888 8999999997 499999999999999999998763 36899999999976432
Q ss_pred CceeEcccCcCccHHHHHHHHHHHHhcC----------CCCcEEeecc--------------eEEEEEeccC-CCC----
Q 004411 662 SAWEICSLTRDFDWKEIAEPVMKLYTET----------TDGSFIEDKE--------------TAIVWHHQHA-DPH---- 712 (755)
Q Consensus 662 ~~w~~~~~~~~~~w~~~v~~i~~~y~~~----------t~gs~iE~k~--------------~~l~~hyr~a-d~~---- 712 (755)
..+.. ..+ .+.+.++++.+.+. ..+.|+.... ....-.+.+. ...
T Consensus 112 ~i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ki 185 (304)
T 3l7y_A 112 SLIEV---FQQ---REDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFKL 185 (304)
T ss_dssp EEEEC---CCC---HHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEEE
T ss_pred EEEEe---cCC---HHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEEE
Confidence 22221 222 23444555444321 1222221110 0000000000 000
Q ss_pred ---cchhhHHHHHHHHHHHhcCCCeE-EEecCeEEEEEeCCCCCCC
Q 004411 713 ---FGSCQAKELLDHLENVLANEPVV-VKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 713 ---~~~~qa~el~~~L~~~l~~~~~~-V~sG~~~VEV~p~gvnKG~ 754 (755)
.......++.+.+.+.+.+..+. +.++..++||.|+++|||.
T Consensus 186 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~ 231 (304)
T 3l7y_A 186 TLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGW 231 (304)
T ss_dssp EEECCGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHH
T ss_pred EEEcCHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHH
Confidence 01234456777777655542344 4588999999999999984
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.31 E-value=4.5e-12 Score=135.10 Aligned_cols=72 Identities=21% Similarity=0.333 Sum_probs=61.8
Q ss_pred CceEEEecCCCcCCCCCCC-CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhh--cCCC--C---ceEEcCCceE
Q 004411 584 NSRLILLDYDGTVMPQTSE-DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF--SGVE--K---LGLSAEHGYF 655 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~-~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f--~~i~--~---l~liaenGa~ 655 (755)
.+|+|++|+||||++ . +..++++++++|++|.+ .|+.|+++|||++..+..++ ..++ + .++|++||+.
T Consensus 26 ~ikli~~DlDGTLl~---~~~~~is~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~ 101 (301)
T 2b30_A 26 DIKLLLIDFDGTLFV---DKDIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTI 101 (301)
T ss_dssp CCCEEEEETBTTTBC---CTTTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTE
T ss_pred cccEEEEECCCCCcC---CCCCccCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeE
Confidence 479999999999998 4 56789999999999997 48999999999999998888 5442 1 4699999999
Q ss_pred EEec
Q 004411 656 TRWS 659 (755)
Q Consensus 656 i~~~ 659 (755)
++..
T Consensus 102 i~~~ 105 (301)
T 2b30_A 102 VYDQ 105 (301)
T ss_dssp EECT
T ss_pred EEeC
Confidence 9874
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.3e-11 Score=129.54 Aligned_cols=71 Identities=20% Similarity=0.222 Sum_probs=59.6
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC--CceEEcCCceEEEe
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE--KLGLSAEHGYFTRW 658 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~--~l~liaenGa~i~~ 658 (755)
++|+|++|+||||++. +..++++++++|++|.+ .|..|+|+|||++..+.+++..++ ..++|++||++++.
T Consensus 8 ~~~li~~DlDGTLl~~---~~~~~~~~~~~l~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~ 80 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDS---HSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQL 80 (275)
T ss_dssp CCEEEEEECTTTTSCS---SCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEEC
T ss_pred CceEEEEeCCCCCCCC---CCcCCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEe
Confidence 4799999999999983 34556778999999986 589999999999999999987653 22699999999973
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.1e-10 Score=129.56 Aligned_cols=247 Identities=15% Similarity=0.167 Sum_probs=154.1
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhh--hCCEEEEeCHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL--NSDLIGFHTFDYAR 259 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll--~~Dligf~t~~~~~ 259 (755)
++++..+| |+|++|+.-...++..+..+..++|++. .+.+.-+...++ |+.+++.+.++ .+|++-..+..+.+
T Consensus 108 ~~l~~~kP--D~Vi~~gd~~~~l~~~laA~~~~IPv~h-~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~ 182 (403)
T 3ot5_A 108 EVIAAENP--DIVLVHGDTTTSFAAGLATFYQQKMLGH-VEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKE 182 (403)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHH
Confidence 34455687 8999998765555544444445788753 333332222222 34455665543 37998889998888
Q ss_pred HHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEe-ccCCcccccccccCchhHHHHHHHHHHcC-CceEEEEeccccc
Q 004411 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP-VGIHMGQFESIMSLDVTGQKVKELKEKFD-GKIVILGVDDMDL 337 (755)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p-~GId~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~VdRld~ 337 (755)
+|.+ .|++. .+|.+++ +++|...+...... . .+.++++. ++.+++.++|...
T Consensus 183 ~l~~-----~Gi~~---------------~~i~vvGn~~~D~~~~~~~~~~--~----~~~~~~l~~~~~vlv~~~r~~~ 236 (403)
T 3ot5_A 183 NLLA-----EGKDP---------------ATIFVTGNTAIDALKTTVQKDY--H----HPILENLGDNRLILMTAHRREN 236 (403)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHSCTTC--C----CHHHHSCTTCEEEEECCCCHHH
T ss_pred HHHH-----cCCCc---------------ccEEEeCCchHHHHHhhhhhhc--c----hHHHHhccCCCEEEEEeCcccc
Confidence 8875 35421 1233444 36665444221100 0 12223333 3456677888754
Q ss_pred -cCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhH
Q 004411 338 -FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (755)
Q Consensus 338 -~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el 416 (755)
-|++...++|+.++.+++|+++ +|.++.| ++ .+++.+++.. +. ...|.++ ++++..++
T Consensus 237 ~~~~l~~ll~a~~~l~~~~~~~~----~v~~~~~----~~---~~~~~l~~~~---~~------~~~v~l~-~~l~~~~~ 295 (403)
T 3ot5_A 237 LGEPMQGMFEAVREIVESREDTE----LVYPMHL----NP---AVREKAMAIL---GG------HERIHLI-EPLDAIDF 295 (403)
T ss_dssp HTTHHHHHHHHHHHHHHHCTTEE----EEEECCS----CH---HHHHHHHHHH---TT------CTTEEEE-CCCCHHHH
T ss_pred cCcHHHHHHHHHHHHHHhCCCce----EEEecCC----CH---HHHHHHHHHh---CC------CCCEEEe-CCCCHHHH
Confidence 3789999999999999999865 5554433 12 2333444332 11 1246655 58888999
Q ss_pred HHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe-CCCCcccccC--CcEEeCCCCH
Q 004411 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EFIGCSPSLS--GAIRVNPWNV 493 (755)
Q Consensus 417 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l~--~ai~VnP~d~ 493 (755)
..+|+.||++|.+| | | +.+||++||. |+|++ ..++..+.+. .+++|.+ |.
T Consensus 296 ~~l~~~ad~vv~~S---G-g-~~~EA~a~g~---------------------PvV~~~~~~~~~e~v~~g~~~lv~~-d~ 348 (403)
T 3ot5_A 296 HNFLRKSYLVFTDS---G-G-VQEEAPGMGV---------------------PVLVLRDTTERPEGIEAGTLKLIGT-NK 348 (403)
T ss_dssp HHHHHHEEEEEECC---H-H-HHHHGGGTTC---------------------CEEECCSSCSCHHHHHHTSEEECCS-CH
T ss_pred HHHHHhcCEEEECC---c-c-HHHHHHHhCC---------------------CEEEecCCCcchhheeCCcEEEcCC-CH
Confidence 99999999999888 2 3 3389999975 67777 5555555553 4677876 99
Q ss_pred HHHHHHHHHHhcCC
Q 004411 494 DAVADAMDSALQME 507 (755)
Q Consensus 494 ~~~A~ai~~aL~m~ 507 (755)
++++++|.++|+.+
T Consensus 349 ~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 349 ENLIKEALDLLDNK 362 (403)
T ss_dssp HHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHcCH
Confidence 99999999999864
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.28 E-value=8.8e-12 Score=131.32 Aligned_cols=71 Identities=20% Similarity=0.249 Sum_probs=61.5
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-C---ceEEcCCceEEEec
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-K---LGLSAEHGYFTRWS 659 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~---l~liaenGa~i~~~ 659 (755)
+|+|++|+||||++ .+..++++++++|++|.+ .|+.|+++|||++..+..++..++ + .++|++||+.++..
T Consensus 5 ~kli~~DlDGTLl~---~~~~i~~~~~~aL~~l~~-~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~ 79 (282)
T 1rkq_A 5 IKLIAIDMDGTLLL---PDHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKA 79 (282)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEET
T ss_pred ceEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEEC
Confidence 68999999999998 467789999999999997 489999999999999998887552 1 26899999999874
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.27 E-value=5.5e-11 Score=125.03 Aligned_cols=96 Identities=10% Similarity=0.128 Sum_probs=72.5
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecCCC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNS 662 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~~~ 662 (755)
+.|+|++|+||||++ ....+++++.++|++|.+. |..|+++|||+...+..++..++ +.++|++||+.++...+.
T Consensus 5 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 80 (290)
T 3dnp_A 5 SKQLLALNIDGALLR---SNGKIHQATKDAIEYVKKK-GIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDA 80 (290)
T ss_dssp -CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTS
T ss_pred cceEEEEcCCCCCCC---CCCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCC
Confidence 479999999999998 4677899999999999874 99999999999999988887653 247999999999864222
Q ss_pred ceeEcccCcCccHHHHHHHHHHHHhc
Q 004411 663 AWEICSLTRDFDWKEIAEPVMKLYTE 688 (755)
Q Consensus 663 ~w~~~~~~~~~~w~~~v~~i~~~y~~ 688 (755)
..... ..+ .+.+.++++.+.+
T Consensus 81 ~~~~~--~l~---~~~~~~i~~~~~~ 101 (290)
T 3dnp_A 81 PFFEK--RIS---DDHTFNIVQVLES 101 (290)
T ss_dssp CSEEC--CCC---HHHHHHHHHHHHT
T ss_pred EEEec--CCC---HHHHHHHHHHHHH
Confidence 22111 222 4566777766654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.27 E-value=2.8e-11 Score=126.40 Aligned_cols=159 Identities=16% Similarity=0.127 Sum_probs=98.1
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-Cc-eEEcCCceEEEecCCC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KL-GLSAEHGYFTRWSKNS 662 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l-~liaenGa~i~~~~~~ 662 (755)
.|+|++|+||||++ .+..++++++++|++ .+ .|+.|+++|||+...+.+++..++ +. ++|++||+.++.. +.
T Consensus 2 ikli~~DlDGTLl~---~~~~i~~~~~~al~~-~~-~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~-~~ 75 (268)
T 1nf2_A 2 YRVFVFDLDGTLLN---DNLEISEKDRRNIEK-LS-RKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLP-EE 75 (268)
T ss_dssp BCEEEEECCCCCSC---TTSCCCHHHHHHHHH-HT-TTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEET-TT
T ss_pred ccEEEEeCCCcCCC---CCCccCHHHHHHHHH-Hh-CCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECC-CC
Confidence 58999999999998 456789999999999 64 699999999999999998887552 22 6999999999874 22
Q ss_pred ceeEcccCcCccHHHHHHHHHHHHhcC--------CCCcEEeecce---------EEEEE-eccC-C----CCc------
Q 004411 663 AWEICSLTRDFDWKEIAEPVMKLYTET--------TDGSFIEDKET---------AIVWH-HQHA-D----PHF------ 713 (755)
Q Consensus 663 ~w~~~~~~~~~~w~~~v~~i~~~y~~~--------t~gs~iE~k~~---------~l~~h-yr~a-d----~~~------ 713 (755)
..... ...+ .+.+.++++.+.+. ..+.|++.+.. .+... +... + ..+
T Consensus 76 ~~i~~-~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~ 151 (268)
T 1nf2_A 76 GVILN-EKIP---PEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLI 151 (268)
T ss_dssp EEEEE-CCBC---HHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEE
T ss_pred CEEEe-cCCC---HHHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEE
Confidence 32211 1223 24445555444321 22333322100 00000 0000 0 000
Q ss_pred -chhhHHHHHHHHHHHhcCCCeEEE-ecCeEEEEEeCCCCCCC
Q 004411 714 -GSCQAKELLDHLENVLANEPVVVK-RGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 714 -~~~qa~el~~~L~~~l~~~~~~V~-sG~~~VEV~p~gvnKG~ 754 (755)
......++.+.+.+.+.+ .+.++ ++..++||.|++++||.
T Consensus 152 ~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~ 193 (268)
T 1nf2_A 152 DTPERLDELKEILSERFKD-VVKVFKSFPTYLEIVPKNVDKGK 193 (268)
T ss_dssp CCHHHHHHHHHHHHHHHTT-TSEEEEEETTEEEEECTTCCHHH
T ss_pred CCHHHHHHHHHHHHHHhcC-CEEEEEecCceEEEeCCCCChHH
Confidence 012334455566554543 35544 88899999999999984
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.22 E-value=2.9e-11 Score=126.50 Aligned_cols=70 Identities=16% Similarity=0.244 Sum_probs=50.3
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC----CceEEcCCceEEEe
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE----KLGLSAEHGYFTRW 658 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~----~l~liaenGa~i~~ 658 (755)
+.|+|++|+||||++ ....+++++.++|++|.+ .+..|+++|||+...+.+++..+. ...+|++||+ +..
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa-i~~ 77 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLN---EKNELAQATIDAVQAAKA-QGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGS-VAQ 77 (279)
T ss_dssp -CCEEEECC--------------CHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGT-EEE
T ss_pred ceEEEEEcCcCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcE-EEE
Confidence 479999999999998 567789999999999997 499999999999999999887652 2369999999 543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=6.8e-12 Score=129.43 Aligned_cols=151 Identities=16% Similarity=0.167 Sum_probs=90.8
Q ss_pred eEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC--CC-CceEEcCCceEEEecC--
Q 004411 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG--VE-KLGLSAEHGYFTRWSK-- 660 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~--i~-~l~liaenGa~i~~~~-- 660 (755)
++|++|+||||++. +..+ +++.++|+++.+ ++.|+|+|||++..+.+++.. ++ ..++|++||+.++...
T Consensus 4 ~li~~DlDGTLl~~---~~~~-~~~~~~l~~~~~--gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~~ 77 (244)
T 1s2o_A 4 LLLISDLDNTWVGD---QQAL-EHLQEYLGDRRG--NFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGL 77 (244)
T ss_dssp EEEEECTBTTTBSC---HHHH-HHHHHHHHTTGG--GEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEE
T ss_pred eEEEEeCCCCCcCC---HHHH-HHHHHHHHHhcC--CCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCCc
Confidence 49999999999983 2222 678888888653 788999999999999998875 32 1469999999998742
Q ss_pred CCceeEcccCcCccH-HHHHHHHHHHHhcCCCCcEE----eecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeE
Q 004411 661 NSAWEICSLTRDFDW-KEIAEPVMKLYTETTDGSFI----EDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVV 735 (755)
Q Consensus 661 ~~~w~~~~~~~~~~w-~~~v~~i~~~y~~~t~gs~i----E~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~ 735 (755)
...|... ....| .+.+..++..+ ++... +.+...+.+++... .......++.+.+.+. ...+.
T Consensus 78 ~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ki~~~~~~~---~~~~~~~~l~~~~~~~--~~~~~ 145 (244)
T 1s2o_A 78 DQHWADY---LSEHWQRDILQAIADGF----EALKPQSPLEQNPWKISYHLDPQ---ACPTVIDQLTEMLKET--GIPVQ 145 (244)
T ss_dssp CHHHHHH---HHTTCCHHHHHHHHHTC----TTEEECCGGGCBTTBEEEEECTT---SCTHHHHHHHHHHHTS--SCCEE
T ss_pred ChHHHHH---HhccccHHHHHHHHHhc----cCccccCcccCCCeEEEEEeChh---hHHHHHHHHHHHHHhc--CCCeE
Confidence 1112211 11123 22233333322 22111 23345566665321 1111223333334321 22466
Q ss_pred E-EecCeEEEEEeCCCCCCC
Q 004411 736 V-KRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 736 V-~sG~~~VEV~p~gvnKG~ 754 (755)
+ .++..++||.|+|++||.
T Consensus 146 ~~~s~~~~lei~~~~~~K~~ 165 (244)
T 1s2o_A 146 VIFSSGKDVDLLPQRSNKGN 165 (244)
T ss_dssp EEEETTTEEEEEETTCSHHH
T ss_pred EEEecCceEEeccCCCChHH
Confidence 5 488999999999999974
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.18 E-value=2.7e-10 Score=120.09 Aligned_cols=71 Identities=21% Similarity=0.238 Sum_probs=61.5
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEec
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~ 659 (755)
.|+|++||||||++ .....++.++++|++|.+ .|..|+++|||+...+..++..++ +..+|++||+.++..
T Consensus 4 ikli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~ 75 (288)
T 1nrw_A 4 MKLIAIDLDGTLLN---SKHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDP 75 (288)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECT
T ss_pred eEEEEEeCCCCCCC---CCCccCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcC
Confidence 68999999999998 456788999999999997 589999999999999999887652 246999999999874
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=4.9e-11 Score=124.02 Aligned_cols=72 Identities=19% Similarity=0.231 Sum_probs=62.3
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEec
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWS 659 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~ 659 (755)
..|+|++|+||||++ ....+++++.++|+++.+ .++.|+++|||+...+.+++..++--.+|++||+.++..
T Consensus 4 M~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~ 75 (274)
T 3fzq_A 4 LYKLLILDIDGTLRD---EVYGIPESAKHAIRLCQK-NHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYH 75 (274)
T ss_dssp CCCEEEECSBTTTBB---TTTBCCHHHHHHHHHHHH-TTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEET
T ss_pred cceEEEEECCCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEEC
Confidence 368999999999998 456789999999999986 599999999999999998887764335899999999865
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.13 E-value=7.6e-11 Score=120.28 Aligned_cols=147 Identities=10% Similarity=-0.020 Sum_probs=92.0
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecCCCc
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNSA 663 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~~~~ 663 (755)
.|+|++|+||||++ .+..++++++++|++|.+ .+..|+++|||+...+.+++..++ +.++|++||+.++... ..
T Consensus 5 ~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~-~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~-~~ 79 (227)
T 1l6r_A 5 IRLAAIDVDGNLTD---RDRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDND-GS 79 (227)
T ss_dssp CCEEEEEHHHHSBC---TTSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTT-SC
T ss_pred eEEEEEECCCCCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCC-CC
Confidence 68999999999998 456789999999999996 589999999999999998887542 2359999999998642 22
Q ss_pred eeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCC----cchhhHHHHHHHHHHHhcCCCeEEEec
Q 004411 664 WEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPH----FGSCQAKELLDHLENVLANEPVVVKRG 739 (755)
Q Consensus 664 w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~----~~~~qa~el~~~L~~~l~~~~~~V~sG 739 (755)
... . . ... +.+.++ +...+ .| ..+.. ...+|+ . .+ ...... +..+.+.+.+ .+.++++
T Consensus 80 ~i~-~-~--~~l-~~~~~i-~~~~~----~~-~~~~~-~~~~~~-~-~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~ 141 (227)
T 1l6r_A 80 IKK-F-F--SNE-GTNKFL-EEMSK----RT-SMRSI-LTNRWR-E-ASTGFDIDPEDV-DYVRKEAESR---GFVIFYS 141 (227)
T ss_dssp EEE-S-S--CSH-HHHHHH-HHHTT----TS-SCBCC-GGGGGC-S-SSEEEBCCGGGH-HHHHHHHHTT---TEEEEEE
T ss_pred EEE-E-e--ccH-HHHHHH-HHHHH----Hh-cCCcc-ccccce-e-cccceEEecCCH-HHHHHHHHhc---CEEEEec
Confidence 220 1 1 111 445555 43322 11 11100 000000 0 00 000111 2223333333 4666699
Q ss_pred CeEEEEEeCCCCCCC
Q 004411 740 QHIVEVKPQVCQHQS 754 (755)
Q Consensus 740 ~~~VEV~p~gvnKG~ 754 (755)
..++||.|++++||.
T Consensus 142 ~~~~ei~~~~~~K~~ 156 (227)
T 1l6r_A 142 GYSWHLMNRGEDKAF 156 (227)
T ss_dssp TTEEEEEETTCSHHH
T ss_pred CcEEEEecCCCCHHH
Confidence 999999999999974
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.12 E-value=1.9e-10 Score=119.54 Aligned_cols=73 Identities=23% Similarity=0.313 Sum_probs=60.7
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEE-EecC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFT-RWSK 660 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i-~~~~ 660 (755)
..|+|++|+||||++. ....+++++.++|++|.+. ++.|+++|||+...+ +.+..++-.++|++||+.+ ...+
T Consensus 11 miKli~~DlDGTLl~~--~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~nGa~i~~~~~ 84 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSF--ETHKVSQSSIDALKKVHDS-GIKIVIATGRAASDL-HEIDAVPYDGVIALNGAECVLRDG 84 (268)
T ss_dssp CCCEEEECSBTTTBCT--TTCSCCHHHHHHHHHHHHT-TCEEEEECSSCTTCC-GGGTTSCCCEEEEGGGTEEEETTS
T ss_pred ceEEEEEeCCCCCcCC--CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCChHHh-HHHHhcCCCcEEEeCCcEEEEcCC
Confidence 4799999999999983 2467889999999999974 999999999999888 4555554456899999999 7653
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.3e-10 Score=118.63 Aligned_cols=149 Identities=13% Similarity=0.055 Sum_probs=93.9
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecCCCc
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNSA 663 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~~~~ 663 (755)
.|+|++|+||||++ ....+++++.++|++|.+ .|+.|+++|||+...+.+++..++ +..+|++||+.+...++..
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~ 78 (231)
T 1wr8_A 3 IKAISIDIDGTITY---PNRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRI 78 (231)
T ss_dssp CCEEEEESTTTTBC---TTSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEE
T ss_pred eeEEEEECCCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEE
Confidence 58999999999998 456788999999999986 599999999999999888876542 2458999999987632111
Q ss_pred eeEcccCcCccHHHHHHHHHHHHhcCCCCcEEee-cce---EEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEEec
Q 004411 664 WEICSLTRDFDWKEIAEPVMKLYTETTDGSFIED-KET---AIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRG 739 (755)
Q Consensus 664 w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~-k~~---~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~sG 739 (755)
|.. .. +.+.++++.+.+..||..++. ... .+.+. .+......+ ..+.+.+.+ .+.+++|
T Consensus 79 ~~~---~l-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~~~~~-~~~~~~~ 141 (231)
T 1wr8_A 79 FLA---SM-----DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM----RETINVETV----REIINELNL-NLVAVDS 141 (231)
T ss_dssp ESC---CC-----SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEEC----TTTSCHHHH----HHHHHHTTC-SCEEEEC
T ss_pred Eec---cH-----HHHHHHHHHHHHhCCCceEEecCCCceeeEEEE----CCCCCHHHH----HHHHHhcCC-cEEEEec
Confidence 221 11 344445544431233433210 000 11111 111111222 223333443 4565599
Q ss_pred CeEEEEEeCCCCCCC
Q 004411 740 QHIVEVKPQVCQHQS 754 (755)
Q Consensus 740 ~~~VEV~p~gvnKG~ 754 (755)
..++|+.|++++||.
T Consensus 142 ~~~~ei~~~~~~K~~ 156 (231)
T 1wr8_A 142 GFAIHVKKPWINKGS 156 (231)
T ss_dssp SSCEEEECTTCCHHH
T ss_pred CcEEEEecCCCChHH
Confidence 999999999999974
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.05 E-value=5.9e-10 Score=115.24 Aligned_cols=71 Identities=17% Similarity=0.261 Sum_probs=59.5
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEec
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWS 659 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~ 659 (755)
.|+|++|+||||++ ....++++++++|++|.+ .|..|+++|||+...+..++..++--.+|+.||+++...
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~ 73 (258)
T 2pq0_A 3 RKIVFFDIDGTLLD---EQKQLPLSTIEAVRRLKQ-SGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFE 73 (258)
T ss_dssp CCEEEECTBTTTBC---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEET
T ss_pred ceEEEEeCCCCCcC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEEC
Confidence 58999999999998 456788999999999987 489999999999998888776542113789999999864
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.01 E-value=6.8e-10 Score=114.63 Aligned_cols=70 Identities=21% Similarity=0.283 Sum_probs=57.9
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~ 660 (755)
+|+|++|+||||+ . +..++ +++++|++|.+ .++.|+|+|||++..+.+++..++ +.++|++||++++..+
T Consensus 2 ikli~~DlDGTLl-~---~~~~~-~~~~~l~~l~~-~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~ 72 (249)
T 2zos_A 2 IRLIFLDIDKTLI-P---GYEPD-PAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPK 72 (249)
T ss_dssp EEEEEECCSTTTC-T---TSCSG-GGHHHHHHHHH-TTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCT
T ss_pred ccEEEEeCCCCcc-C---CCCcH-HHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccC
Confidence 5899999999999 3 23444 49999999986 589999999999999998887552 3479999999998763
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.99 E-value=3.4e-10 Score=117.44 Aligned_cols=69 Identities=19% Similarity=0.309 Sum_probs=57.5
Q ss_pred eEEEecCCCcCCCCCCCCCC-CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC----CceEEcCCceEEEec
Q 004411 586 RLILLDYDGTVMPQTSEDKR-PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE----KLGLSAEHGYFTRWS 659 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~~~~~-p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~----~l~liaenGa~i~~~ 659 (755)
|+|++|+||||++. +.. ++++++++|++|.+ .|+.|+++|||+ ..+.+++..++ --++|++||+.+...
T Consensus 3 kli~~DlDGTLl~~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~ 76 (261)
T 2rbk_A 3 KALFFDIDGTLVSF---ETHRIPSSTIEALEAAHA-KGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVG 76 (261)
T ss_dssp CEEEECSBTTTBCT---TTSSCCHHHHHHHHHHHH-TTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEET
T ss_pred cEEEEeCCCCCcCC---CCCcCCHHHHHHHHHHHH-CCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEEC
Confidence 89999999999983 455 88999999999997 489999999999 88877765442 125899999999874
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=4e-10 Score=116.86 Aligned_cols=67 Identities=15% Similarity=0.188 Sum_probs=56.9
Q ss_pred EEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCC
Q 004411 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKN 661 (755)
Q Consensus 587 lI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~ 661 (755)
+|++|+||||++. . .+++.+.++|++|.+ +++.|+++|||+...+. .++ + ..++|++||+.+..+.+
T Consensus 2 li~~DlDGTLl~~---~-~i~~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~-~l~-~-~~~~i~~nGa~i~~~~~ 68 (259)
T 3zx4_A 2 IVFTDLDGTLLDE---R-GELGPAREALERLRA-LGVPVVPVTAKTRKEVE-ALG-L-EPPFIVENGGGLYLPRD 68 (259)
T ss_dssp EEEECCCCCCSCS---S-SSCSTTHHHHHHHHH-TTCCEEEBCSSCHHHHH-HTT-C-CSSEEEGGGTEEEEETT
T ss_pred EEEEeCCCCCcCC---C-cCCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHH-HcC-C-CCcEEEECCcEEEeCCC
Confidence 7999999999983 4 778899999999996 59999999999999998 443 2 24699999999988744
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=4.9e-07 Score=97.63 Aligned_cols=244 Identities=11% Similarity=0.040 Sum_probs=147.0
Q ss_pred HHHHhCCCCCEEEEeCCccc--hHH-HHHHhh-cCCCeEEEEEecCCCchhhhhcCCChHHH-HHHhhhCCEEEEeCHHH
Q 004411 183 VMEVINPDEDYVWIHDYHLM--VLP-SFLRKR-FHRVKVGFFLHSPFPSSEIYRTLPVRDEI-LKSLLNSDLIGFHTFDY 257 (755)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~--llp-~~lr~~-~~~~~i~~flH~PfP~~e~~r~lp~~~~i-l~~ll~~Dligf~t~~~ 257 (755)
+...+++ +|+|.+|-..+. ..+ .++++. ..++|+.+..|--||-.-. .-+..... ...+-.||.|..++...
T Consensus 68 ~~~~~~~-~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~--~~~~~~~~E~~~y~~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 68 IVAGLRH-GDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFS--GNFYLMDRTIAYYNKADVVVAPSQKM 144 (339)
T ss_dssp HTTTCCT-TCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCG--GGGGGHHHHHHHHTTCSEEEESCHHH
T ss_pred HHhcCCC-CCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCc--cchhhHHHHHHHHHHCCEEEECCHHH
Confidence 4444554 599999866542 222 233331 1289999999987663210 00111111 12245789999999877
Q ss_pred HHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccC-CcccccccccCchhHHHHHHHHHHcCCceEEEEecccc
Q 004411 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGI-HMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMD 336 (755)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GI-d~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld 336 (755)
.+.+.+ .|+. ..+| ++.++ |.. .+. + . ....++++|+++||+.
T Consensus 145 ~~~l~~-----~G~~---------------~~ki--~~~~~~~~~--~~~---~-~--------~~~~~~~~i~yaG~l~ 188 (339)
T 3rhz_A 145 IDKLRD-----FGMN---------------VSKT--VVQGMWDHP--TQA---P-M--------FPAGLKREIHFPGNPE 188 (339)
T ss_dssp HHHHHH-----TTCC---------------CSEE--EECCSCCCC--CCC---C-C--------CCCEEEEEEEECSCTT
T ss_pred HHHHHH-----cCCC---------------cCce--eecCCCCcc--Ccc---c-c--------cccCCCcEEEEeCCcc
Confidence 666553 1322 0122 23333 211 010 0 0 0113467899999998
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhH
Q 004411 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (755)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el 416 (755)
...++.. + .|+++ |+++|.. ++. +.+ .|+|+ |.+|.+|+
T Consensus 189 k~~~L~~-------l---~~~~~----f~ivG~G-----~~~----------------~l~-----nV~f~-G~~~~~el 227 (339)
T 3rhz_A 189 RFSFVKE-------W---KYDIP----LKVYTWQ-----NVE----------------LPQ-----NVHKI-NYRPDEQL 227 (339)
T ss_dssp TCGGGGG-------C---CCSSC----EEEEESC-----CCC----------------CCT-----TEEEE-ECCCHHHH
T ss_pred hhhHHHh-------C---CCCCe----EEEEeCC-----ccc----------------CcC-----CEEEe-CCCCHHHH
Confidence 5322221 1 46665 8888843 221 011 37766 68999999
Q ss_pred HHHHHhCcEEEEcCCCcC---------CCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---C
Q 004411 417 VPYYAIAECCVVNCVRDG---------MNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---G 484 (755)
Q Consensus 417 ~aly~~ADv~vvtS~~EG---------~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 484 (755)
+++|+.||+.++. .+| ++....||||||. |+|++..++..+.+. .
T Consensus 228 ~~~l~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~G~---------------------PVI~~~~~~~~~~v~~~~~ 284 (339)
T 3rhz_A 228 LMEMSQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAAGI---------------------PVIVQEGIANQELIENNGL 284 (339)
T ss_dssp HHHHHTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHHTC---------------------CEEEETTCTTTHHHHHHTC
T ss_pred HHHHHhCCEEEEE--CCCchhHHHHhcChHHHHHHHHcCC---------------------CEEEccChhHHHHHHhCCe
Confidence 9999999999987 233 3667899999975 889999988888773 4
Q ss_pred cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHH
Q 004411 485 AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSI 534 (755)
Q Consensus 485 ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 534 (755)
|+.++ +.++++++|.. +.+++++.+.+..+++..+....+-.++-
T Consensus 285 G~~~~--~~~e~~~~i~~---l~~~~~~~m~~na~~~a~~~~~~~f~k~~ 329 (339)
T 3rhz_A 285 GWIVK--DVEEAIMKVKN---VNEDEYIELVKNVRSFNPILRKGFFTRRL 329 (339)
T ss_dssp EEEES--SHHHHHHHHHH---CCHHHHHHHHHHHHHHTHHHHTTHHHHHH
T ss_pred EEEeC--CHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 78887 58888888875 34667766666666665544333334333
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.68 E-value=5.8e-07 Score=98.82 Aligned_cols=244 Identities=12% Similarity=0.064 Sum_probs=142.6
Q ss_pred HHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhh--hCCEEEEeCHHHHH
Q 004411 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL--NSDLIGFHTFDYAR 259 (755)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll--~~Dligf~t~~~~~ 259 (755)
++++..+| |+|.+|+.-...++ .+..+..++|+++ ++.+.-+.+ + ++.+++.+.+. .+|++-..+..+.+
T Consensus 88 ~~l~~~kP--D~Vlv~gd~~~~~a-alaA~~~~IPv~h-~eaglrs~~--~--~~pee~nR~~~~~~a~~~~~~te~~~~ 159 (385)
T 4hwg_A 88 EVLEKEKP--DAVLFYGDTNSCLS-AIAAKRRKIPIFH-MEAGNRCFD--Q--RVPEEINRKIIDHISDVNITLTEHARR 159 (385)
T ss_dssp HHHHHHCC--SEEEEESCSGGGGG-HHHHHHTTCCEEE-ESCCCCCSC--T--TSTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHhcCC--cEEEEECCchHHHH-HHHHHHhCCCEEE-EeCCCcccc--c--cCcHHHHHHHHHhhhceeecCCHHHHH
Confidence 34455687 89999986544444 3333345788753 343332211 1 23345555542 47888888888888
Q ss_pred HHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEe-ccCCcccccccccCchhHHHHHHHHHHcC---CceEEEEeccc
Q 004411 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP-VGIHMGQFESIMSLDVTGQKVKELKEKFD---GKIVILGVDDM 335 (755)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p-~GId~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vil~VdRl 335 (755)
+|++ .|++. .+|.+.+ +++|.-.+... .....+++++++ ++.+++..+|.
T Consensus 160 ~l~~-----~G~~~---------------~~I~vtGnp~~D~~~~~~~------~~~~~~~~~~lgl~~~~~iLvt~hr~ 213 (385)
T 4hwg_A 160 YLIA-----EGLPA---------------ELTFKSGSHMPEVLDRFMP------KILKSDILDKLSLTPKQYFLISSHRE 213 (385)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCSHHHHHHHHHH------HHHHCCHHHHTTCCTTSEEEEEECCC
T ss_pred HHHH-----cCCCc---------------CcEEEECCchHHHHHHhhh------hcchhHHHHHcCCCcCCEEEEEeCCc
Confidence 8764 35431 1222232 35553322110 011234556663 45566677885
Q ss_pred c---ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHH-hcccCCCCCccEEEecCCC
Q 004411 336 D---LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEI-NLNFGKPGYEPIVIIKEPL 411 (755)
Q Consensus 336 d---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~I-n~~~g~~~~~pV~~~~~~v 411 (755)
. ..|++..+++|++++.+++ +++ +|... ++. +++.+ ++. +. .+ ....|.++ +++
T Consensus 214 e~~~~~~~l~~ll~al~~l~~~~-~~~----vv~p~------~p~---~~~~l----~~~~~~-~~--~~~~v~l~-~~l 271 (385)
T 4hwg_A 214 ENVDVKNNLKELLNSLQMLIKEY-NFL----IIFST------HPR---TKKRL----EDLEGF-KE--LGDKIRFL-PAF 271 (385)
T ss_dssp -----CHHHHHHHHHHHHHHHHH-CCE----EEEEE------CHH---HHHHH----HTSGGG-GG--TGGGEEEC-CCC
T ss_pred hhcCcHHHHHHHHHHHHHHHhcC-CeE----EEEEC------ChH---HHHHH----HHHHHH-hc--CCCCEEEE-cCC
Confidence 4 4478999999999998765 543 43322 122 22222 222 10 01 11246644 578
Q ss_pred ChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEe-CCCCccccc--CCcEEe
Q 004411 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EFIGCSPSL--SGAIRV 488 (755)
Q Consensus 412 ~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l--~~ai~V 488 (755)
+..++..+|+.||+++..| |.+..||+++|. |+|+. +.++..+.+ +.+++|
T Consensus 272 g~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~---------------------Pvv~~~~~ter~e~v~~G~~~lv 325 (385)
T 4hwg_A 272 SFTDYVKLQMNAFCILSDS-----GTITEEASILNL---------------------PALNIREAHERPEGMDAGTLIMS 325 (385)
T ss_dssp CHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTC---------------------CEEECSSSCSCTHHHHHTCCEEC
T ss_pred CHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCC---------------------CEEEcCCCccchhhhhcCceEEc
Confidence 8889999999999999877 446799999975 44443 333344445 246677
Q ss_pred CCCCHHHHHHHHHHHhcCCH
Q 004411 489 NPWNVDAVADAMDSALQMEN 508 (755)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~ 508 (755)
.+ |.+++++++.++|+++.
T Consensus 326 ~~-d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 326 GF-KAERVLQAVKTITEEHD 344 (385)
T ss_dssp CS-SHHHHHHHHHHHHTTCB
T ss_pred CC-CHHHHHHHHHHHHhChH
Confidence 65 99999999999998763
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.9e-08 Score=105.73 Aligned_cols=162 Identities=14% Similarity=0.078 Sum_probs=94.0
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHH-------HHhcCCCCcEEEEcCCChhhHHhhhcCC--C--CceEEcCC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILN-------DLCNDPKNAVFIVSGRGKDSLGNWFSGV--E--KLGLSAEH 652 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~-------~L~~d~~~~V~IvSGR~~~~L~~~f~~i--~--~l~liaen 652 (755)
.+|+|+|||||||++. . +++++...|. +++.+++..++++|||+...+..++..+ + .-.+++.+
T Consensus 21 ~~kliifDlDGTLlds---~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~~ 95 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPH---T--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASDL 95 (289)
T ss_dssp CSEEEEEETBTTTBCS---S--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEETT
T ss_pred CCeEEEEECCCCCcCC---C--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeecC
Confidence 5799999999999983 2 5566666655 3445678899999999999998887643 1 12377888
Q ss_pred ceEEEecC-CCc------eeEcccCcCccHHHHHHHHHHHHhcC--C---CCcEEeecceEEEEEeccCCCCcchhhHHH
Q 004411 653 GYFTRWSK-NSA------WEICSLTRDFDWKEIAEPVMKLYTET--T---DGSFIEDKETAIVWHHQHADPHFGSCQAKE 720 (755)
Q Consensus 653 Ga~i~~~~-~~~------w~~~~~~~~~~w~~~v~~i~~~y~~~--t---~gs~iE~k~~~l~~hyr~ad~~~~~~qa~e 720 (755)
|..++... .+. |...... ....+.+.++++.+.+. . ..+..+.+...+.+||+..++........+
T Consensus 96 g~~i~~~~~ng~~~~~~~~~~~~~~--~~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (289)
T 3gyg_A 96 GTEITYFSEHNFGQQDNKWNSRINE--GFSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLA 173 (289)
T ss_dssp TTEEEECCSSSTTEECHHHHHHHHT--TCCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHH
T ss_pred CceEEEEcCCCcEeecCchhhhhcc--cCCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHH
Confidence 87776632 111 1111100 11145667777665432 1 222234455667888887643211111222
Q ss_pred HHHHHHHHhcCCCeEEEe---------cCeEEEEEeCCCCCCC
Q 004411 721 LLDHLENVLANEPVVVKR---------GQHIVEVKPQVCQHQS 754 (755)
Q Consensus 721 l~~~L~~~l~~~~~~V~s---------G~~~VEV~p~gvnKG~ 754 (755)
+...++.. +....+.. |..++|+.|.+.+||.
T Consensus 174 ~~~~l~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 214 (289)
T 3gyg_A 174 IEKICEEY--GVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNE 214 (289)
T ss_dssp HHHHHHHH--TEEEEEEECCGGGTCCTTEEEEEEEESCCSHHH
T ss_pred HHHHHHHc--CCCEEEEEccccccCCCCceEEEEEeCCCCHHH
Confidence 22222221 21223333 3479999999999973
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.34 E-value=6.6e-07 Score=84.02 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=50.6
Q ss_pred ceEEEecCCCcCCCCC-CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC---hhhHHhhhcCCC-CceEEcCCc
Q 004411 585 SRLILLDYDGTVMPQT-SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG---KDSLGNWFSGVE-KLGLSAEHG 653 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~-~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~---~~~L~~~f~~i~-~l~liaenG 653 (755)
.|+||+|+||||++.. +.-..+.+.++++|++|.+ .|+.|+|+|||+ +..+.+|+.... ...+|+.|+
T Consensus 3 ~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~-~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~ 75 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGLEFYAANKDY 75 (142)
T ss_dssp CCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSS
T ss_pred CeEEEEECcCCCCCCCCccccccCHHHHHHHHHHHH-CCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCC
Confidence 6899999999999843 1112345689999999986 499999999998 667788876541 234666664
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=1.5e-05 Score=93.30 Aligned_cols=149 Identities=12% Similarity=0.117 Sum_probs=102.9
Q ss_pred CCceEEEEeccccccCChHH-HHHHHHHHHH--hCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004411 324 DGKIVILGVDDMDLFKGISL-KFLAMGQLLE--QHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP 399 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~-~l~A~~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~ 399 (755)
++..+++.|.|+..-||..+ .+..++++++ .+|+.. ..+++|..|....+. .....+-+.+.++++-||..=...
T Consensus 524 pd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~ 602 (796)
T 1l5w_A 524 PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVG 602 (796)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTG
T ss_pred CCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 36789999999999999999 8999888865 466521 236677665433222 333455667888888888631111
Q ss_pred CCccEEEecCCCChhhHHHHHHhCcEEEEcCC--CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC
Q 004411 400 GYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (755)
Q Consensus 400 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (755)
+.-.|+|+. ..+-.--..+|.+||+++.||. .|.-|+.-+-||.- |.|-+|..-|
T Consensus 603 ~~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N----------------------GaL~iGtLDG 659 (796)
T 1l5w_A 603 DKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN----------------------GALTVGTLDG 659 (796)
T ss_dssp GGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT----------------------TCEEEECSCT
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc----------------------CCeeecCcCC
Confidence 222377765 4566667789999999999999 78888887777764 3556677777
Q ss_pred ccccc------CCcEEeCCCCHHHHH
Q 004411 478 CSPSL------SGAIRVNPWNVDAVA 497 (755)
Q Consensus 478 ~~~~l------~~ai~VnP~d~~~~A 497 (755)
+-.++ .+++++.. +.+++.
T Consensus 660 anvEi~e~vG~~NgF~FG~-~~~ev~ 684 (796)
T 1l5w_A 660 ANVEIAEKVGEENIFIFGH-TVEQVK 684 (796)
T ss_dssp THHHHHHHHCGGGSEECSC-CHHHHH
T ss_pred eeeehhhccCCCcEEEecC-CHHHHH
Confidence 65443 25888877 777765
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.12 E-value=5.4e-06 Score=97.04 Aligned_cols=150 Identities=8% Similarity=0.093 Sum_probs=102.8
Q ss_pred CCceEEEEeccccccCChHH-HHHHHHHHHH--hCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004411 324 DGKIVILGVDDMDLFKGISL-KFLAMGQLLE--QHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP 399 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~-~l~A~~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~ 399 (755)
++..+++.|.|+..-||..+ .+..++++++ ++|+.. ..+++|..|....+. .....+-+.+.++++-||..=...
T Consensus 514 pd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~ 592 (796)
T 2c4m_A 514 PESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVS 592 (796)
T ss_dssp TTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTT
T ss_pred CCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 36789999999999999999 8999998875 566522 236676655433222 333455667888888888642222
Q ss_pred CCccEEEecCCCChhhHHHHHHhCcEEEEcCC--CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC
Q 004411 400 GYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (755)
Q Consensus 400 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (755)
+.-.|+|+. ..+-.--..+|.+||+++.||. .|.-|+.-+-||.- |.|-+|..-|
T Consensus 593 ~~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N----------------------GaL~iGtLDG 649 (796)
T 2c4m_A 593 PLLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN----------------------GALTLGTMDG 649 (796)
T ss_dssp TTEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT----------------------TCEEEEESST
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc----------------------CCeEEeccCC
Confidence 222488775 4566667789999999999999 78888887777764 3455566666
Q ss_pred ccccc------CCcEEeCC--CCHHHHH
Q 004411 478 CSPSL------SGAIRVNP--WNVDAVA 497 (755)
Q Consensus 478 ~~~~l------~~ai~VnP--~d~~~~A 497 (755)
+-.++ .+++++.. .+++++-
T Consensus 650 anvEi~e~vG~~NgF~FG~~~~ev~~l~ 677 (796)
T 2c4m_A 650 ANVEIVDSVGEENAYIFGARVEELPALR 677 (796)
T ss_dssp HHHHHHHHHCGGGSEEESCCTTTHHHHH
T ss_pred eEeehhhhcCCCcEEEecCchhhHHHHH
Confidence 54443 25788876 5665544
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.03 E-value=0.00012 Score=86.16 Aligned_cols=151 Identities=9% Similarity=0.067 Sum_probs=102.7
Q ss_pred CCceEEEEeccccccCChHHH-HHHHHHHH--HhCCCCCC-cEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004411 324 DGKIVILGVDDMDLFKGISLK-FLAMGQLL--EQHPDLRG-KVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP 399 (755)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~-l~A~~~ll--~~~P~~~~-~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~ 399 (755)
++..+++.|.|+..-||..+. +..+++++ ..+|+..- .+++|..|....+. .....+-+.+.++++.+|..=...
T Consensus 548 pd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~ 626 (824)
T 2gj4_A 548 PNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTG
T ss_pred CCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccC
Confidence 367899999999999999998 88888886 35665321 35676655433222 333455667888888887542222
Q ss_pred CCccEEEecCCCChhhHHHHHHhCcEEEEcCC--CcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC
Q 004411 400 GYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (755)
Q Consensus 400 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (755)
+.-.|+|+. ..+..--..+|.+||+++.||. .|.-|+.-+-||.- |.|-+|..-|
T Consensus 627 ~~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN----------------------GaLtigtlDG 683 (824)
T 2gj4_A 627 DRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN----------------------GALTIGTMDG 683 (824)
T ss_dssp GGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT----------------------TCEEEECSCT
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc----------------------CceEEEEecC
Confidence 222488775 4566666789999999999999 78888887777764 4566666666
Q ss_pred ccccc----C--CcEEeCCCCHHHHHHHH
Q 004411 478 CSPSL----S--GAIRVNPWNVDAVADAM 500 (755)
Q Consensus 478 ~~~~l----~--~ai~VnP~d~~~~A~ai 500 (755)
+..++ + +|+++... .+++ +++
T Consensus 684 anvEi~e~vG~~Ngf~FG~~-~~ev-~~l 710 (824)
T 2gj4_A 684 ANVEMAEEAGEENFFIFGMR-VEDV-DRL 710 (824)
T ss_dssp THHHHHHHHCGGGSEECSCC-HHHH-HHH
T ss_pred ccchhhhccCCCCEEEeCCc-HHHH-HHH
Confidence 55332 2 47888876 6666 444
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.97 E-value=7e-06 Score=75.44 Aligned_cols=50 Identities=20% Similarity=0.369 Sum_probs=39.9
Q ss_pred ceEEEecCCCcCCCCCCCC---CCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh
Q 004411 585 SRLILLDYDGTVMPQTSED---KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~---~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (755)
.|+|++|+||||++..... ..+++.+.++|++|.+ .+..++++|||+...
T Consensus 1 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~-~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQ-LGFEIVISTARNMRT 53 (126)
T ss_dssp CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHH-TTCEEEEEECTTTTT
T ss_pred CCEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHh-CCCeEEEEeCCChhh
Confidence 4799999999999843110 1467899999999997 489999999999754
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00014 Score=79.43 Aligned_cols=99 Identities=9% Similarity=-0.033 Sum_probs=62.9
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEE----eCCCCcc
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV----SEFIGCS 479 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~~ 479 (755)
|.+. +.++ ...++..||++|. .|-+.+..|||+||. |+|+ .+..+.+
T Consensus 286 v~~~-~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G~---------------------P~v~~p~~~~q~~~a 336 (398)
T 4fzr_A 286 VLAA-GQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEGV---------------------PQVSVPVIAEVWDSA 336 (398)
T ss_dssp EEEE-SCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTTC---------------------CEEECCCSGGGHHHH
T ss_pred EEEe-CcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhCC---------------------CEEecCCchhHHHHH
Confidence 6654 4665 5678888999994 444667899999975 6666 3333555
Q ss_pred ccc---CCcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHH
Q 004411 480 PSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAK 532 (755)
Q Consensus 480 ~~l---~~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 532 (755)
+.+ ..|+++++. |.++++++|.++|+++. .|+...+..+++...+.+...++
T Consensus 337 ~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 337 RLLHAAGAGVEVPWEQAGVESVLAACARIRDDSS-YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp HHHHHTTSEEECC-------CHHHHHHHHHHCTH-HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred HHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHcCCCHHHHHH
Confidence 555 248899887 78999999999999764 33333344555555566555444
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=8.2e-05 Score=81.37 Aligned_cols=156 Identities=12% Similarity=0.049 Sum_probs=99.1
Q ss_pred CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004411 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV 404 (755)
.+.+++++|++. .|+...+..+++.+ ++. +++ ++.++++.. +.+++ .+ + . ..|
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l-~~~-~~~----~~~~~g~~~----~~~~l----~~----~----~----~~v 294 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGL-AGL-DAD----VLVASGPSL----DVSGL----GE----V----P----ANV 294 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHH-HTS-SSE----EEEECCSSC----CCTTC----CC----C----C----TTE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHH-HcC-CCE----EEEEECCCC----Chhhh----cc----C----C----CcE
Confidence 456788899996 66766666666655 333 222 444443221 00011 10 0 1 136
Q ss_pred EEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC----ccc
Q 004411 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----CSP 480 (755)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~ 480 (755)
.+. +.+ ++..+|+.||++|.+| |. .+.+|||+||. |+|+....+ .++
T Consensus 295 ~~~-~~~---~~~~~l~~ad~~v~~~---g~-~t~~Ea~a~G~---------------------P~v~~p~~~~q~~~~~ 345 (412)
T 3otg_A 295 RLE-SWV---PQAALLPHVDLVVHHG---GS-GTTLGALGAGV---------------------PQLSFPWAGDSFANAQ 345 (412)
T ss_dssp EEE-SCC---CHHHHGGGCSEEEESC---CH-HHHHHHHHHTC---------------------CEEECCCSTTHHHHHH
T ss_pred EEe-CCC---CHHHHHhcCcEEEECC---ch-HHHHHHHHhCC---------------------CEEecCCchhHHHHHH
Confidence 655 455 4889999999999776 32 58899999975 677754443 455
Q ss_pred cc---CCcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHH
Q 004411 481 SL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (755)
Q Consensus 481 ~l---~~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 537 (755)
.+ ..|++++|. |.++++++|.++|+++ +.++...+..+++...+++..-++.+.+-
T Consensus 346 ~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 406 (412)
T 3otg_A 346 AVAQAGAGDHLLPDNISPDSVSGAAKRLLAEE-SYRAGARAVAAEIAAMPGPDEVVRLLPGF 406 (412)
T ss_dssp HHHHHTSEEECCGGGCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHSCCHHHHHTTHHHH
T ss_pred HHHHcCCEEecCcccCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 55 248999987 8999999999999875 34444455566667777777666655443
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00023 Score=81.75 Aligned_cols=171 Identities=6% Similarity=-0.108 Sum_probs=104.4
Q ss_pred ceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEE
Q 004411 326 KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIV 405 (755)
Q Consensus 326 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~ 405 (755)
..++.+..|+ .|..+..++++.+++++.|+.+ +.+..++. ..+... .+.+++.+. .|.. .|+
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~--L~l~~~g~---~~g~~~-~~~~~~~~~--GI~~--------Rv~ 502 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVKV--HFHFALGQ---SNGITH-PYVERFIKS--YLGD--------SAT 502 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEE--EEEEEESS---CCGGGH-HHHHHHHHH--HHGG--------GEE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcE--EEEEecCC---CchhhH-HHHHHHHHc--CCCc--------cEE
Confidence 4556667875 7999999999999999999743 11122331 122222 222232221 2321 366
Q ss_pred EecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc---
Q 004411 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL--- 482 (755)
Q Consensus 406 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--- 482 (755)
|. +.++.++..+.|+.||||+.|+.+.| |++.+|||+||. |+|.....+...-+
T Consensus 503 F~-g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGV---------------------PVVTl~G~~~asRvgaS 559 (631)
T 3q3e_A 503 AH-PHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGL---------------------VGVCKTGAEVHEHIDEG 559 (631)
T ss_dssp EE-CCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTC---------------------CEEEECCSSHHHHHHHH
T ss_pred Ec-CCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCC---------------------CEEeccCCcHHHHhHHH
Confidence 54 68999999999999999999998877 999999999964 55553322221111
Q ss_pred -----C-CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh---cCHHHHHHHHHHHHHHH
Q 004411 483 -----S-GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS---HDVAYWAKSIDQDLERA 541 (755)
Q Consensus 483 -----~-~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~~l~~l~~~ 541 (755)
+ ..++|- .|.++.++...++.++++ .+....+++++...+ ++ .|.+.|-+.++++
T Consensus 560 lL~~~GLpE~LIA-~d~eeYv~~Av~La~D~~-~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~ 623 (631)
T 3q3e_A 560 LFKRLGLPEWLIA-NTVDEYVERAVRLAENHQ-ERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEK 623 (631)
T ss_dssp HHHHTTCCGGGEE-SSHHHHHHHHHHHHHCHH-HHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHH
T ss_pred HHHhcCCCcceec-CCHHHHHHHHHHHhCCHH-HHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHH
Confidence 1 122222 378999988888888754 455444555555432 22 3444444444443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.69 E-value=1.4e-05 Score=82.41 Aligned_cols=54 Identities=19% Similarity=0.253 Sum_probs=44.2
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC---CChhhHHhhhcC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG---RGKDSLGNWFSG 642 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG---R~~~~L~~~f~~ 642 (755)
+.|+|++|+||||++. + .+.++++++|++|.+ .|..|+++|| |+...+.+.+..
T Consensus 7 ~~kli~~DlDGTLl~~---~-~~~~~~~~ai~~l~~-~Gi~v~l~Tgr~~r~~~~~~~~l~~ 63 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGKS---V-TPIPEGVEGVKKLKE-LGKKIIFVSNNSTRSRRILLERLRS 63 (268)
T ss_dssp CCSEEEEECBTTTEET---T-EECHHHHHHHHHHHH-TTCEEEEEECCSSSCHHHHHHHHHH
T ss_pred cCCEEEEcCcCcEECC---C-EeCcCHHHHHHHHHH-cCCeEEEEeCcCCCCHHHHHHHHHH
Confidence 4799999999999983 2 355789999999997 4999999999 677777666653
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.64 E-value=1.8e-05 Score=81.70 Aligned_cols=55 Identities=20% Similarity=0.278 Sum_probs=46.9
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEc---CCChhhHHhhhcCC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFSGV 643 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~f~~i 643 (755)
+.|+|++|+||||++ .++.+ ++++++|++|.+ .|..|+++| ||+...+.+.+..+
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i-~~~~eal~~l~~-~G~~vvl~Tn~~gr~~~~~~~~l~~l 61 (264)
T 3epr_A 4 AYKGYLIDLDGTIYK---GKSRI-PAGERFIERLQE-KGIPYMLVTNNTTRTPESVQEMLRGF 61 (264)
T ss_dssp CCCEEEECCBTTTEE---TTEEC-HHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHHTT
T ss_pred CCCEEEEeCCCceEe---CCEEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHC
Confidence 479999999999998 45556 799999999997 499999999 88888888887654
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=4.5e-05 Score=82.99 Aligned_cols=154 Identities=12% Similarity=0.079 Sum_probs=98.7
Q ss_pred CceEEEEeccccccCCh-HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004411 325 GKIVILGVDDMDLFKGI-SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi-~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~p 403 (755)
.+.+++++|++...|+. ..+++++.+. +++|+++ ++.++.+ .+.+.+ .. .. ..
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~~-----~~~~~l----~~--------~~----~~ 271 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVPP-----EHRALL----TD--------LP----DN 271 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECCG-----GGGGGC----TT--------CC----TT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEECC-----cchhhc----cc--------CC----CC
Confidence 35678888999886666 8888888888 8787765 6555532 221111 10 01 13
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCC----CCcc
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF----IGCS 479 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~----~G~~ 479 (755)
|.+. +.++..+ ++..||++|.. |-..+..|+|+||. |+|+.-+ .+.+
T Consensus 272 v~~~-~~~~~~~---ll~~ad~~v~~----~G~~t~~Ea~~~G~---------------------P~v~~p~~~~q~~~a 322 (391)
T 3tsa_A 272 ARIA-ESVPLNL---FLRTCELVICA----GGSGTAFTATRLGI---------------------PQLVLPQYFDQFDYA 322 (391)
T ss_dssp EEEC-CSCCGGG---TGGGCSEEEEC----CCHHHHHHHHHTTC---------------------CEEECCCSTTHHHHH
T ss_pred EEEe-ccCCHHH---HHhhCCEEEeC----CCHHHHHHHHHhCC---------------------CEEecCCcccHHHHH
Confidence 6544 5677655 45999999953 44467899999975 5666333 3344
Q ss_pred ccc---CCcEEeCC----CCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHH
Q 004411 480 PSL---SGAIRVNP----WNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSI 534 (755)
Q Consensus 480 ~~l---~~ai~VnP----~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 534 (755)
+.+ ..|++++| .|.++++++|.++|+++. .+....+...++...+.+...++.+
T Consensus 323 ~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i 383 (391)
T 3tsa_A 323 RNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTG-FAAAAIKLSDEITAMPHPAALVRTL 383 (391)
T ss_dssp HHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTH-HHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 444 24899998 899999999999999864 3333333445555556665555543
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.49 E-value=3.6e-05 Score=79.24 Aligned_cols=54 Identities=17% Similarity=0.232 Sum_probs=44.0
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC---CChhhHHhhhcC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG---RGKDSLGNWFSG 642 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG---R~~~~L~~~f~~ 642 (755)
+.|+|++|+||||++. ..+.++++++|++|.+ .|..|+++|| |+...+.+.+..
T Consensus 5 ~~kli~~DlDGTLl~~----~~~~~~~~~ai~~l~~-~Gi~v~laTgrs~r~~~~~~~~l~~ 61 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYNG----TEKIEEACEFVRTLKD-RGVPYLFVTNNSSRTPKQVADKLVS 61 (266)
T ss_dssp CCSEEEEECSSSTTCH----HHHHHHHHHHHHHHHH-TTCCEEEEESCCSSCHHHHHHHHHH
T ss_pred cCCEEEEeCcCceEeC----CEeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 4799999999999972 3456789999999997 4999999988 677777666654
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00034 Score=77.06 Aligned_cols=103 Identities=9% Similarity=-0.038 Sum_probs=69.0
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC----c
Q 004411 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----C 478 (755)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~ 478 (755)
.|.+. +.+++. .+|+.||++|..+ |. .+.+|||+||. |+|++...| .
T Consensus 284 ~v~~~-~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G~---------------------P~i~~p~~~~q~~~ 334 (430)
T 2iyf_A 284 NVEVH-DWVPQL---AILRQADLFVTHA---GA-GGSQEGLATAT---------------------PMIAVPQAVDQFGN 334 (430)
T ss_dssp TEEEE-SSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTTC---------------------CEEECCCSHHHHHH
T ss_pred CeEEE-ecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhCC---------------------CEEECCCccchHHH
Confidence 36654 567664 6899999988754 43 68899999975 777776654 2
Q ss_pred cccc---CCcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHH
Q 004411 479 SPSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535 (755)
Q Consensus 479 ~~~l---~~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (755)
++.+ ..|+.+++. |.++++++|.++|+++ +.++...+..++....+.+...++.+.
T Consensus 335 a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (430)
T 2iyf_A 335 ADMLQGLGVARKLATEEATADLLRETALALVDDP-EVARRLRRIQAEMAQEGGTRRAADLIE 395 (430)
T ss_dssp HHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 3333 248889887 8899999999999864 334333334444445555555555443
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=5.2e-05 Score=78.11 Aligned_cols=67 Identities=15% Similarity=0.168 Sum_probs=51.9
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEc---CCChhhHHhhhcCCC----CceEEcCCceE
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFSGVE----KLGLSAEHGYF 655 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~f~~i~----~l~liaenGa~ 655 (755)
+.+.|++|+||||++. ..+++.+.++|++|.+ .|..|+++| ||+...+.+++..+. .-.++++||+.
T Consensus 16 ~~~~v~~DlDGTLl~~----~~~~~~~~~~l~~l~~-~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~ 89 (271)
T 1vjr_A 16 KIELFILDMDGTFYLD----DSLLPGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEIT 89 (271)
T ss_dssp GCCEEEECCBTTTEET----TEECTTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHH
T ss_pred CCCEEEEcCcCcEEeC----CEECcCHHHHHHHHHH-cCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHH
Confidence 5789999999999983 3456789999999997 489999999 999999888886531 11356666654
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00021 Score=69.57 Aligned_cols=69 Identities=17% Similarity=0.093 Sum_probs=50.7
Q ss_pred HHHHHHhhccCceEEEecCCCcCCCCC---------------------CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC
Q 004411 574 HHIASAYNKTNSRLILLDYDGTVMPQT---------------------SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (755)
Q Consensus 574 ~~i~~~y~~s~~rlI~lD~DGTL~~~~---------------------~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~ 632 (755)
+.+..+-..+..|+|++|+||||.+.. .....+.+.+.++|++|.+. +..++|+||++
T Consensus 16 ~~~~~~~m~~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~-G~~v~ivT~~~ 94 (187)
T 2wm8_A 16 ENLYFQSMARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSL-GVPGAAASRTS 94 (187)
T ss_dssp HHHHHHHHHTSCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHH-TCCEEEEECCS
T ss_pred chhHHHHHHhccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHC-CceEEEEeCCC
Confidence 344433334467999999999999531 01235678899999999974 89999999999
Q ss_pred -hhhHHhhhcCC
Q 004411 633 -KDSLGNWFSGV 643 (755)
Q Consensus 633 -~~~L~~~f~~i 643 (755)
...++..+..+
T Consensus 95 ~~~~~~~~l~~~ 106 (187)
T 2wm8_A 95 EIEGANQLLELF 106 (187)
T ss_dssp CHHHHHHHHHHT
T ss_pred ChHHHHHHHHHc
Confidence 68887777643
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0015 Score=70.81 Aligned_cols=138 Identities=10% Similarity=-0.024 Sum_probs=86.0
Q ss_pred CceEEEEecccccc-------CChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC
Q 004411 325 GKIVILGVDDMDLF-------KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFG 397 (755)
Q Consensus 325 ~~~vil~VdRld~~-------KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g 397 (755)
...+++++|++... +.+...++|++++ +++ ++.++. +++. +++.. +. .
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~----~~~~~g-----~~~~----~~l~~----~~---~ 264 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVE----LIVAAP-----DTVA----EALRA----EV---P 264 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCE----EEEECC-----HHHH----HHHHH----HC---T
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcE----EEEEeC-----CCCH----HhhCC----CC---C
Confidence 35688999999875 5677777777542 232 444431 1222 12221 11 1
Q ss_pred CCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC
Q 004411 398 KPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (755)
Q Consensus 398 ~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (755)
.|.+ +.++. ..+|..||+||..+ | ..+..|+|+||. |+|+..+.+
T Consensus 265 -----~v~~--~~~~~---~~~l~~~d~~v~~~---G-~~t~~Ea~~~G~---------------------P~v~~p~~~ 309 (384)
T 2p6p_A 265 -----QARV--GWTPL---DVVAPTCDLLVHHA---G-GVSTLTGLSAGV---------------------PQLLIPKGS 309 (384)
T ss_dssp -----TSEE--ECCCH---HHHGGGCSEEEECS---C-TTHHHHHHHTTC---------------------CEEECCCSH
T ss_pred -----ceEE--cCCCH---HHHHhhCCEEEeCC---c-HHHHHHHHHhCC---------------------CEEEccCcc
Confidence 2454 56765 45789999999753 4 457899999975 667766543
Q ss_pred ----ccccc---CCcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh
Q 004411 478 ----CSPSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (755)
Q Consensus 478 ----~~~~l---~~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 524 (755)
.++.+ ..|+.+++. +.++++++|.++|+.+ +.++++.+..+.+..
T Consensus 310 dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 310 VLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKD--TYARRAQDLSREISG 363 (384)
T ss_dssp HHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHh
Confidence 33334 247888875 7899999999999864 344445554444443
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00055 Score=65.35 Aligned_cols=123 Identities=11% Similarity=0.152 Sum_probs=80.9
Q ss_pred CceEEEEecccc---ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004411 325 GKIVILGVDDMD---LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (755)
Q Consensus 325 ~~~vil~VdRld---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~ 401 (755)
...+++++|++. +.|++...++|++++ + .+ ++.++.+.. .+ ...
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~~----~~~~~g~~~---~~-----------------~~~---- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-QK----VLWRFDGNK---PD-----------------TLG---- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-SE----EEEECCSSC---CT-----------------TCC----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-Ce----EEEEECCcC---cc-----------------cCC----
Confidence 467899999985 667777777777532 2 22 444443211 00 011
Q ss_pred ccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC----
Q 004411 402 EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG---- 477 (755)
Q Consensus 402 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G---- 477 (755)
..|.+. +.++..++.++ ..||++|.. -| +.+..|+|+||. |+|+..+.+
T Consensus 68 ~~v~~~-~~~~~~~~l~~-~~ad~~I~~---~G-~~t~~Ea~~~G~---------------------P~i~~p~~~~Q~~ 120 (170)
T 2o6l_A 68 LNTRLY-KWIPQNDLLGH-PKTRAFITH---GG-ANGIYEAIYHGI---------------------PMVGIPLFADQPD 120 (170)
T ss_dssp TTEEEE-SSCCHHHHHTS-TTEEEEEEC---CC-HHHHHHHHHHTC---------------------CEEECCCSTTHHH
T ss_pred CcEEEe-cCCCHHHHhcC-CCcCEEEEc---CC-ccHHHHHHHcCC---------------------CEEeccchhhHHH
Confidence 136644 68888776654 999999964 34 488999999975 667666542
Q ss_pred ccccc---CCcEEeCCC--CHHHHHHHHHHHhcCC
Q 004411 478 CSPSL---SGAIRVNPW--NVDAVADAMDSALQME 507 (755)
Q Consensus 478 ~~~~l---~~ai~VnP~--d~~~~A~ai~~aL~m~ 507 (755)
.++.+ ..|+.+++. +.++++++|.++++.+
T Consensus 121 na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 121 NIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDP 155 (170)
T ss_dssp HHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCH
Confidence 23334 247888886 8899999999999864
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00022 Score=69.13 Aligned_cols=59 Identities=19% Similarity=0.215 Sum_probs=46.5
Q ss_pred CceEEEecCCCcCCCCCCC---C----CCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 584 NSRLILLDYDGTVMPQTSE---D----KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~---~----~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
..|+|++|+||||++.... . ...+++..++|++|.+. +..++|+|||+...++..+..+
T Consensus 7 ~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-G~~~~i~Tg~~~~~~~~~~~~l 72 (180)
T 1k1e_A 7 NIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDA-DIQVAVLSGRDSPILRRRIADL 72 (180)
T ss_dssp GCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHT-TCEEEEEESCCCHHHHHHHHHH
T ss_pred CCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHC-CCeEEEEeCCCcHHHHHHHHHc
Confidence 4799999999999974210 1 13456788999999974 8999999999999988887654
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0056 Score=66.27 Aligned_cols=85 Identities=12% Similarity=0.072 Sum_probs=56.6
Q ss_pred hhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcc--------ccc-C-
Q 004411 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS--------PSL-S- 483 (755)
Q Consensus 414 ~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~--------~~l-~- 483 (755)
+++..+|+.||++|..| | +.+..|+++||. |.|+.-+.+.. +.+ .
T Consensus 244 ~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G~---------------------P~Ilip~p~~~~~~Q~~NA~~l~~~ 298 (365)
T 3s2u_A 244 SDMAAAYAWADLVICRA---G-ALTVSELTAAGL---------------------PAFLVPLPHAIDDHQTRNAEFLVRS 298 (365)
T ss_dssp SCHHHHHHHCSEEEECC---C-HHHHHHHHHHTC---------------------CEEECC-----CCHHHHHHHHHHTT
T ss_pred hhhhhhhccceEEEecC---C-cchHHHHHHhCC---------------------CeEEeccCCCCCcHHHHHHHHHHHC
Confidence 57999999999998644 5 567789999975 55655554332 223 2
Q ss_pred -CcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh
Q 004411 484 -GAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (755)
Q Consensus 484 -~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 524 (755)
.|++++.. +.++++++|.++|++++ .++.+.++.++....
T Consensus 299 G~a~~l~~~~~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~~~ 341 (365)
T 3s2u_A 299 GAGRLLPQKSTGAAELAAQLSEVLMHPE-TLRSMADQARSLAKP 341 (365)
T ss_dssp TSEEECCTTTCCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTCCT
T ss_pred CCEEEeecCCCCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcCCc
Confidence 37888765 47899999999999874 344444455554433
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0003 Score=66.63 Aligned_cols=59 Identities=19% Similarity=0.147 Sum_probs=46.2
Q ss_pred CceEEEecCCCcCCCCCC---C----CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 584 NSRLILLDYDGTVMPQTS---E----DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~---~----~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.|+|++|+||||++... . ....+++..++|++|.+ .+..++|+||++...++..+..+
T Consensus 8 ~~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~l~~~ 73 (162)
T 2p9j_A 8 KLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQK-MGITLAVISGRDSAPLITRLKEL 73 (162)
T ss_dssp HCCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHT-TTCEEEEEESCCCHHHHHHHHHT
T ss_pred ceeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHc
Confidence 479999999999997321 0 12235678899999996 48899999999999988888654
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00017 Score=74.26 Aligned_cols=67 Identities=9% Similarity=0.024 Sum_probs=47.5
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC--C-----ceEEcCCceEE
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE--K-----LGLSAEHGYFT 656 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~--~-----l~liaenGa~i 656 (755)
.|+|++|+||||++. .... +++.++|++|.+ .+..|+++|||+......++..+. + -.+++.||+..
T Consensus 1 ik~i~~D~DGtL~~~---~~~~-~~~~~~l~~l~~-~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~~~~ 74 (263)
T 1zjj_A 1 MVAIIFDMDGVLYRG---NRAI-PGVRELIEFLKE-RGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATR 74 (263)
T ss_dssp CEEEEEECBTTTEET---TEEC-TTHHHHHHHHHH-HTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHH
T ss_pred CeEEEEeCcCceEeC---CEeC-ccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHHHHH
Confidence 379999999999973 2333 678999999986 489999999999765544443211 1 24667777654
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0003 Score=72.81 Aligned_cols=59 Identities=17% Similarity=0.227 Sum_probs=44.8
Q ss_pred ccCceEEEecCCCcCCCCCC----------------------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC---hhhH
Q 004411 582 KTNSRLILLDYDGTVMPQTS----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG---KDSL 636 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~----------------------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~---~~~L 636 (755)
..++++|+||+||||++..+ ....+.+.+.++|+.|.+ .|..++|+|||+ ...+
T Consensus 56 ~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~-~Gi~i~iaTnr~~~~~~~~ 134 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTES-KGVDIYYISNRKTNQLDAT 134 (258)
T ss_dssp CSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHH-TTCEEEEEEEEEGGGHHHH
T ss_pred CCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCEEEEEcCCchhHHHHH
Confidence 34689999999999998410 014567899999999997 489999999999 4445
Q ss_pred Hhhhc
Q 004411 637 GNWFS 641 (755)
Q Consensus 637 ~~~f~ 641 (755)
.+.+.
T Consensus 135 ~~~L~ 139 (258)
T 2i33_A 135 IKNLE 139 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55553
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00044 Score=72.85 Aligned_cols=54 Identities=24% Similarity=0.379 Sum_probs=43.9
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEc---CCChhhHHhhhcC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFSG 642 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~f~~ 642 (755)
+.|+|++|+||||++. ..+.+.+.++|++|.+ .+..|+++| ||+...+.+.+..
T Consensus 20 ~~k~i~~D~DGTL~~~----~~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~~~~~ 76 (306)
T 2oyc_A 20 RAQGVLFDCDGVLWNG----ERAVPGAPELLERLAR-AGKAALFVSNNSRRARPELALRFAR 76 (306)
T ss_dssp HCSEEEECSBTTTEET----TEECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHH
T ss_pred hCCEEEECCCCcEecC----CccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHh
Confidence 4789999999999973 2345679999999997 489999999 6888887777754
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00075 Score=64.78 Aligned_cols=48 Identities=21% Similarity=0.327 Sum_probs=39.2
Q ss_pred ceEEEecCCCcCCCCCC------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 585 SRLILLDYDGTVMPQTS------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
.|++++|+||||+.... ....+.+.+.++|++|.+ .|..++|+|+++.
T Consensus 1 ~k~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~-~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQ-ADWTVVLATNQSG 54 (179)
T ss_dssp CCEEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTT
T ss_pred CCEEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHH-CCCEEEEEECCCc
Confidence 47999999999997531 123567899999999997 4899999999985
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.00072 Score=68.73 Aligned_cols=58 Identities=14% Similarity=0.158 Sum_probs=45.9
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEc---CCChhhHHhhhcC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFSG 642 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~f~~ 642 (755)
+.|+|++|+||||++....+..+.+...++++.|.+ .|..++++| ||+...+.+.+..
T Consensus 11 ~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~-~G~~~~~~t~~~gr~~~~~~~~l~~ 71 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKR-SRLKVRFCTNESAASRAELVGQLQR 71 (271)
T ss_dssp TCCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHH-SSSEEEEECCCCSSCHHHHHHHHHH
T ss_pred cCCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHH-CCCcEEEEECCCCCCHHHHHHHHHH
Confidence 479999999999998321134466788888999986 489999999 9999888777764
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00058 Score=62.00 Aligned_cols=52 Identities=13% Similarity=0.108 Sum_probs=42.3
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
.|+|++|+||||.. ...+.+.+.++|++|.+. +..++|+|+++...++..+.
T Consensus 2 ~k~i~~D~DgtL~~----~~~~~~~~~~~l~~L~~~-G~~~~i~S~~~~~~~~~~l~ 53 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG----TDEDQRRWRNLLAAAKKN-GVGTVILSNDPGGLGAAPIR 53 (137)
T ss_dssp CCEEEECSTTTTSS----CHHHHHHHHHHHHHHHHT-TCEEEEEECSCCGGGGHHHH
T ss_pred CcEEEEeccceecC----CCccCccHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHH
Confidence 47999999999943 344668899999999974 88999999999887666554
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.00088 Score=66.87 Aligned_cols=53 Identities=15% Similarity=0.308 Sum_probs=41.4
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEc---CCChhhHHhhhcC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFSG 642 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~f~~ 642 (755)
.|+|++|+||||++. ....++. .+++++|.+ .|..++++| ||+...+.+.+..
T Consensus 3 ~k~i~fDlDGTLl~~---~~~~~~~-~~~~~~l~~-~g~~~~~~t~~~g~~~~~~~~~~~~ 58 (250)
T 2c4n_A 3 IKNVICDIDGVLMHD---NVAVPGA-AEFLHGIMD-KGLPLVLLTNYPSQTGQDLANRFAT 58 (250)
T ss_dssp CCEEEEECBTTTEET---TEECTTH-HHHHHHHHH-TTCCEEEEESCCSCCHHHHHHHHHH
T ss_pred ccEEEEcCcceEEeC---CEeCcCH-HHHHHHHHH-cCCcEEEEECCCCCCHHHHHHHHHH
Confidence 689999999999983 3344455 788888886 488899999 9998887777653
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0019 Score=63.61 Aligned_cols=58 Identities=7% Similarity=0.035 Sum_probs=44.3
Q ss_pred cCceEEEecCCCcCCCCCCC----------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 583 TNSRLILLDYDGTVMPQTSE----------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~----------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+..|+|+||+||||++..-. ...+-+.+.++|+.|.+. +..++|+||+....+.+..+
T Consensus 4 ~~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-g~~~~i~T~~~~~~~~~~~~ 71 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQ-GMPCAWIDELPEALSTPLAA 71 (196)
T ss_dssp -CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHH-TCCEEEECCSCHHHHHHHHT
T ss_pred CcCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHC-CCEEEEEcCChHHHHHHhcC
Confidence 35789999999999873210 114567899999999864 88999999999988766554
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=96.60 E-value=3.8e-05 Score=82.33 Aligned_cols=67 Identities=10% Similarity=-0.017 Sum_probs=46.2
Q ss_pred ccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh---hhHH---hhh--cCCC-CceEEcCC
Q 004411 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK---DSLG---NWF--SGVE-KLGLSAEH 652 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~---~~L~---~~f--~~i~-~l~liaen 652 (755)
....|+|++|+||||++.. . . +.|.++... +..++++|||+. ..+. .++ ..+. +..+++.|
T Consensus 18 ~~~~kli~fDlDGTLld~~---~-----~-~~l~~~~~~-g~~~~~~tGR~~~~~~~~~~~~~~~~~~~l~~~~~~i~~n 87 (332)
T 1y8a_A 18 YFQGHMFFTDWEGPWILTD---F-----A-LELCMAVFN-NARFFSNLSEYDDYLAYEVRREGYEAGYTLKLLTPFLAAA 87 (332)
T ss_dssp --CCCEEEECSBTTTBCCC---H-----H-HHHHHHHHC-CHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHHHHHHHHT
T ss_pred CCCceEEEEECcCCCcCcc---H-----H-HHHHHHHHC-CCEEEEEcCCCchhhhhhhhccCeechhhcCCcCeEEEcC
Confidence 3457899999999999832 1 1 667777653 678899999999 6665 555 3221 23478899
Q ss_pred ceEEEe
Q 004411 653 GYFTRW 658 (755)
Q Consensus 653 Ga~i~~ 658 (755)
|+.+..
T Consensus 88 Ga~i~~ 93 (332)
T 1y8a_A 88 GVKNRD 93 (332)
T ss_dssp TCCHHH
T ss_pred CcEEEE
Confidence 998763
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0022 Score=64.88 Aligned_cols=53 Identities=21% Similarity=0.225 Sum_probs=39.5
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEc---CCChhhHHhhhc
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFS 641 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~f~ 641 (755)
..|+|++|+||||++. .... ++..++++.|.+ .|..++++| ||+...+.+.+.
T Consensus 6 ~ik~i~fDlDGTLld~---~~~~-~~~~~ai~~l~~-~G~~~~~~t~~~~~~~~~~~~~l~ 61 (259)
T 2ho4_A 6 ALKAVLVDLNGTLHIE---DAAV-PGAQEALKRLRA-TSVMVRFVTNTTKETKKDLLERLK 61 (259)
T ss_dssp CCCEEEEESSSSSCC------CC-TTHHHHHHHHHT-SSCEEEEEECCSSCCHHHHHHHHH
T ss_pred hCCEEEEeCcCcEEeC---CEeC-cCHHHHHHHHHH-CCCeEEEEeCCCCcCHHHHHHHHH
Confidence 5799999999999983 2323 567888999986 488899999 666666666554
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0026 Score=63.21 Aligned_cols=49 Identities=20% Similarity=0.275 Sum_probs=39.4
Q ss_pred CceEEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 584 NSRLILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
+.|++++|+||||+.... ....+.+.+.++|++|.+. +..++|+|+++.
T Consensus 24 ~~k~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-G~~~~ivTn~~~ 77 (211)
T 2gmw_A 24 SVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKM-GFALVVVTNQSG 77 (211)
T ss_dssp CBCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTH
T ss_pred cCCEEEEcCCCCeECCCCcccCcccCcCCcCHHHHHHHHHHC-CCeEEEEECcCC
Confidence 468999999999997421 1135678899999999974 899999999993
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0019 Score=62.97 Aligned_cols=62 Identities=18% Similarity=0.178 Sum_probs=43.8
Q ss_pred hccCceEEEecCCCcCCCCCC----CCC---CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 581 NKTNSRLILLDYDGTVMPQTS----EDK---RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 581 ~~s~~rlI~lD~DGTL~~~~~----~~~---~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+..+.|+|++|+||||++... ... .....-..+|++|.+ .+..++|+||++...++.++..+
T Consensus 22 ~~~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~-~g~~v~ivT~~~~~~~~~~l~~l 90 (188)
T 2r8e_A 22 KAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALT-SDIEVAIITGRKAKLVEDRCATL 90 (188)
T ss_dssp HHHTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHT-TTCEEEEECSSCCHHHHHHHHHH
T ss_pred HHhcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHH-CCCeEEEEeCCChHHHHHHHHHc
Confidence 445789999999999997320 010 111222347888886 48999999999999888887643
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.00058 Score=64.75 Aligned_cols=59 Identities=19% Similarity=0.106 Sum_probs=41.1
Q ss_pred CceEEEecCCCcCCCCCC---CCC----CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 584 NSRLILLDYDGTVMPQTS---EDK----RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~---~~~----~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.|+|++|+||||++... ... .....-...|+.|.+. +..++|+||++...++..+..+
T Consensus 3 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~~~ 68 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNK-GIPVGILTGEKTEIVRRRAEKL 68 (164)
T ss_dssp CCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHHHHT-TCCEEEECSSCCHHHHHHHHHT
T ss_pred cceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHc
Confidence 578999999999998320 110 0001112257888864 8899999999999988888754
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0021 Score=66.59 Aligned_cols=54 Identities=15% Similarity=0.225 Sum_probs=43.2
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC---CChhhHHhhhcC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG---RGKDSLGNWFSG 642 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG---R~~~~L~~~f~~ 642 (755)
+.|+|++|+||||++. ..+.+.+.+.|++|.+ .+..|+++|| |+...+.+.+..
T Consensus 13 ~~k~i~~D~DGtL~~~----~~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~r~~~~~~~~l~~ 69 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKTY----NGLLPGIENTFDYLKA-QGQDYYIVTNDASRSPEQLADSYHK 69 (284)
T ss_dssp GCSEEEECSBTTTEET----TEECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHH
T ss_pred cCCEEEEcCcCCcCcC----CeeChhHHHHHHHHHH-CCCEEEEEeCCCCcCHHHHHHHHHH
Confidence 4789999999999983 2245688999999997 4899999995 788777776654
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0012 Score=63.75 Aligned_cols=59 Identities=15% Similarity=0.096 Sum_probs=41.0
Q ss_pred CceEEEecCCCcCCCCCCCC---CCCC----HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 584 NSRLILLDYDGTVMPQTSED---KRPS----TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~---~~p~----~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.|+|+||+||||++....- .... -.---+|+.|.+. +..++|+||+....++..+..+
T Consensus 11 ~~k~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~~~~l 76 (176)
T 3mmz_A 11 DIDAVVLDFDGTQTDDRVLIDSDGREFVSVHRGDGLGIAALRKS-GLTMLILSTEQNPVVAARARKL 76 (176)
T ss_dssp GCSEEEECCTTTTSCSCCEECTTCCEEEEEEHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHH
T ss_pred cCCEEEEeCCCCcCcCCEeecCCccHhHhcccccHHHHHHHHHC-CCeEEEEECcChHHHHHHHHHc
Confidence 57899999999999832110 0000 0111158888864 8999999999999988888654
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.0033 Score=60.45 Aligned_cols=58 Identities=16% Similarity=0.128 Sum_probs=38.4
Q ss_pred hccCceEEEecCCCcCCCCCC---CCCC----CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 581 NKTNSRLILLDYDGTVMPQTS---EDKR----PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 581 ~~s~~rlI~lD~DGTL~~~~~---~~~~----p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+..++|+|++|+||||++..- .... .+-.-...|+.|.+ .+..++|+||+ ...+..+.
T Consensus 5 ~~~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~~~L~~Lk~-~Gi~~~I~Tg~--~~~~~~l~ 69 (168)
T 3ewi_A 5 KLKEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDAIGISLLKK-SGIEVRLISER--ACSKQTLS 69 (168)
T ss_dssp --CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHHHHHHHHHH-TTCEEEEECSS--CCCHHHHH
T ss_pred hHhcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcHHHHHHHHH-CCCEEEEEeCc--HHHHHHHH
Confidence 445789999999999998431 0100 01112246888887 48999999999 66666665
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0037 Score=63.82 Aligned_cols=53 Identities=15% Similarity=0.131 Sum_probs=41.6
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+.|+|+||+||||++. .... +.+.+.|+.|.+ .+..++++|||+......++.
T Consensus 4 ~~k~v~fDlDGTL~~~---~~~~-~~~~~~l~~l~~-~g~~~~~~t~~~~~~~~~~~~ 56 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYLG---KEPI-PAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQ 56 (264)
T ss_dssp SCCEEEECCBTTTEET---TEEC-HHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHH
T ss_pred cCCEEEEeCCCeEEeC---CEEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHH
Confidence 4689999999999983 3333 688899999986 488999999998776555543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0015 Score=64.49 Aligned_cols=60 Identities=18% Similarity=0.229 Sum_probs=42.4
Q ss_pred cCceEEEecCCCcCCCCCCCCCCCCHHHH-------HHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVL-------SILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~~~p~~~~~-------~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.+.|+|+||+||||++.........+++. ..|+.|.+ .+..++|+||++...++..+..+
T Consensus 23 ~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~-~G~~~~ivT~~~~~~~~~~l~~l 89 (195)
T 3n07_A 23 KQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMN-AGIEIAIITGRRSQIVENRMKAL 89 (195)
T ss_dssp HTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHH-TTCEEEEECSSCCHHHHHHHHHT
T ss_pred hCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHH-CCCEEEEEECcCHHHHHHHHHHc
Confidence 46899999999999973211000112222 24888886 48999999999999998888754
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.91 E-value=0.002 Score=63.10 Aligned_cols=60 Identities=15% Similarity=0.131 Sum_probs=42.1
Q ss_pred cCceEEEecCCCcCCCCCCCCCCCCHHHHH-------HHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLS-------ILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~-------~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.+.|+|++|+||||.+.........+++.+ .|+.|.+ .+..++|+||++...++..+..+
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~-~g~~~~ivTn~~~~~~~~~l~~l 83 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMA-AGIQVAIITTAQNAVVDHRMEQL 83 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHH-TTCEEEEECSCCSHHHHHHHHHH
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHH-CCCeEEEEeCcChHHHHHHHHHc
Confidence 468999999999998732111111122333 3888886 48999999999999888887643
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.0038 Score=62.20 Aligned_cols=62 Identities=18% Similarity=0.265 Sum_probs=43.4
Q ss_pred ChHHHHHHhhccCceEEEecCCCcCCCCCCC-------------------------------CCCCCHHHHHHHHHHhcC
Q 004411 572 GMHHIASAYNKTNSRLILLDYDGTVMPQTSE-------------------------------DKRPSTEVLSILNDLCND 620 (755)
Q Consensus 572 ~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~~-------------------------------~~~p~~~~~~~L~~L~~d 620 (755)
.+++|.......+.|+|+||+||||++..+. ...+.+.+.++|+.|.+
T Consensus 24 ~~~~i~~~~~~~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~- 102 (211)
T 2b82_A 24 SVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR- 102 (211)
T ss_dssp CHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH-
T ss_pred eHhhHhhhcccCCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHH-
Confidence 3555554433445899999999999973210 01134578899999986
Q ss_pred CCCcEEEEcCCChh
Q 004411 621 PKNAVFIVSGRGKD 634 (755)
Q Consensus 621 ~~~~V~IvSGR~~~ 634 (755)
.+..++|+||++..
T Consensus 103 ~G~~l~ivTn~~~~ 116 (211)
T 2b82_A 103 RGDAIFFVTGRSPT 116 (211)
T ss_dssp HTCEEEEEECSCCC
T ss_pred CCCEEEEEcCCcHH
Confidence 48899999999755
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.032 Score=61.62 Aligned_cols=146 Identities=9% Similarity=0.011 Sum_probs=84.2
Q ss_pred ceEEEEecccccc-----CChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 004411 326 KIVILGVDDMDLF-----KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (755)
Q Consensus 326 ~~vil~VdRld~~-----KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~ 400 (755)
..|+++.|++... |++...++|+.++ +++ +|.++.. .+.+++ . ...
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~----~v~~~g~-----~~~~~l----~--------~~~--- 318 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAE----IIATFDA-----QQLEGV----A--------NIP--- 318 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SSE----EEECCCT-----TTTSSC----S--------SCC---
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCE----EEEEECC-----cchhhh----c--------cCC---
Confidence 4688999998764 8888888888643 222 4433321 111011 0 011
Q ss_pred CccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC---
Q 004411 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG--- 477 (755)
Q Consensus 401 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G--- 477 (755)
..|. +.+.++.. .+|..||++|. +-| ..+..|++++|. |+|+..+.+
T Consensus 319 -~~v~-~~~~~~~~---~ll~~ad~~V~---~~G-~~t~~Ea~~~G~---------------------P~i~~p~~~dQ~ 368 (441)
T 2yjn_A 319 -DNVR-TVGFVPMH---ALLPTCAATVH---HGG-PGSWHTAAIHGV---------------------PQVILPDGWDTG 368 (441)
T ss_dssp -SSEE-ECCSCCHH---HHGGGCSEEEE---CCC-HHHHHHHHHTTC---------------------CEEECCCSHHHH
T ss_pred -CCEE-EecCCCHH---HHHhhCCEEEE---CCC-HHHHHHHHHhCC---------------------CEEEeCCcccHH
Confidence 1355 44677764 46899999996 344 457899999975 677766643
Q ss_pred -ccccc---CCcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh-hhcCHHHHHH
Q 004411 478 -CSPSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAK 532 (755)
Q Consensus 478 -~~~~l---~~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~ 532 (755)
.++.+ ..|+.+++. +.++++++|.++|+.+ +.+.++.+..+.+ ....+..-++
T Consensus 369 ~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 428 (441)
T 2yjn_A 369 VRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDP--AHRAGAARMRDDMLAEPSPAEVVG 428 (441)
T ss_dssp HHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHcCCCHHHHHH
Confidence 23333 347888876 8899999999999864 3344444443333 3444444333
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=95.72 E-value=0.0048 Score=61.39 Aligned_cols=49 Identities=18% Similarity=0.259 Sum_probs=40.1
Q ss_pred CceEEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 584 NSRLILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
..+++++|+||||+.... ....+.+.+.++|++|.+ .+..++|+|+++.
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~L~~L~~-~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANR-AGIPVVVVTNQSG 83 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHH-HTCCEEEEEECHH
T ss_pred cCCEEEEeCCCCcCCCCcccCCcccCeECcCHHHHHHHHHH-CCCEEEEEcCcCC
Confidence 478999999999997421 124567899999999997 4899999999998
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.0093 Score=57.87 Aligned_cols=58 Identities=9% Similarity=0.051 Sum_probs=44.5
Q ss_pred CceEEEecCCCcCCCCCC-----------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh---hhHHhhhcC
Q 004411 584 NSRLILLDYDGTVMPQTS-----------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK---DSLGNWFSG 642 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~-----------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~---~~L~~~f~~ 642 (755)
+.|+|++|+||||+.... ....+.+.+.++|++|.+. +..++|+|+++. ..++..+..
T Consensus 2 ~ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~-g~~~~i~Tn~~~~~~~~~~~~l~~ 73 (189)
T 3ib6_A 2 SLTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQL-GFKQAILSNTATSDTEVIKRVLTN 73 (189)
T ss_dssp -CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHH
T ss_pred CceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHC-CCEEEEEECCCccchHHHHHHHHh
Confidence 368999999999976321 1245678999999999974 899999999886 666666654
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.022 Score=61.45 Aligned_cols=101 Identities=11% Similarity=0.051 Sum_probs=64.2
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCC-----CCc
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-----IGC 478 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-----~G~ 478 (755)
|.+. +.++.. .++..||++|..+ |. .+..|++++|. |+|+.-. .+.
T Consensus 283 v~~~-~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~---------------------P~v~~p~~~~~q~~~ 333 (402)
T 3ia7_A 283 VEAH-QWIPFH---SVLAHARACLTHG---TT-GAVLEAFAAGV---------------------PLVLVPHFATEAAPS 333 (402)
T ss_dssp EEEE-SCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHTTC---------------------CEEECGGGCGGGHHH
T ss_pred EEEe-cCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHhCC---------------------CEEEeCCCcccHHHH
Confidence 6644 566665 8999999998765 33 46689999975 5554333 233
Q ss_pred cccc---CCcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHHH
Q 004411 479 SPSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSID 535 (755)
Q Consensus 479 ~~~l---~~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 535 (755)
+..+ ..|+.+++. +.+++++++.++|+++ +.+.++++..+.+ ..+.+..-++.+.
T Consensus 334 a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~ 394 (402)
T 3ia7_A 334 AERVIELGLGSVLRPDQLEPASIREAVERLAADS--AVRERVRRMQRDILSSGGPARAADEVE 394 (402)
T ss_dssp HHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHhhCChHHHHHHHHH
Confidence 3434 247888886 8999999999999874 3344444444434 3344444444333
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=95.45 E-value=0.0047 Score=60.26 Aligned_cols=60 Identities=20% Similarity=0.156 Sum_probs=41.8
Q ss_pred cCceEEEecCCCcCCCCCC---CCCC----CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 583 TNSRLILLDYDGTVMPQTS---EDKR----PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~---~~~~----p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.+.|+|+||+||||++... .... ....--.+|+.|.+ .+..++|+||+....++..+..+
T Consensus 17 ~~ik~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~~~~l 83 (189)
T 3mn1_A 17 KAIKLAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQGIKMLIA-SGVTTAIISGRKTAIVERRAKSL 83 (189)
T ss_dssp HTCCEEEECSTTTTSCSEEEEETTSCEEEEEEHHHHHHHHHHHH-TTCEEEEECSSCCHHHHHHHHHH
T ss_pred HhCCEEEEcCCCCcCCccEeeccCCcEeeeeccccHHHHHHHHH-CCCEEEEEECcChHHHHHHHHHc
Confidence 3679999999999997421 0000 01111127888886 48899999999999888887653
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=95.44 E-value=0.018 Score=62.55 Aligned_cols=149 Identities=11% Similarity=0.022 Sum_probs=84.5
Q ss_pred CceEEEEecccccc-CChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004411 325 GKIVILGVDDMDLF-KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (755)
Q Consensus 325 ~~~vil~VdRld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~p 403 (755)
.+.+++++|++... |+...+..+++.+.+ . +++ +++++.+. +.+.+ .. .. ..
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-~-~~~----~v~~~g~~-----~~~~l----~~--------~~----~~ 284 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE-V-DAD----FVLALGDL-----DISPL----GT--------LP----RN 284 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT-S-SSE----EEEECTTS-----CCGGG----CS--------CC----TT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc-C-CCE----EEEEECCc-----Chhhh----cc--------CC----Cc
Confidence 45788889999655 355555455554432 2 333 55555332 10011 10 01 13
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEE----eCCCCcc
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV----SEFIGCS 479 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~~ 479 (755)
|.+. +.++ ...++..||++|.. |-..+..|+|+||. |+|+ .+-.+.+
T Consensus 285 v~~~-~~~~---~~~ll~~ad~~v~~----~G~~t~~Eal~~G~---------------------P~v~~p~~~dq~~~a 335 (398)
T 3oti_A 285 VRAV-GWTP---LHTLLRTCTAVVHH----GGGGTVMTAIDAGI---------------------PQLLAPDPRDQFQHT 335 (398)
T ss_dssp EEEE-SSCC---HHHHHTTCSEEEEC----CCHHHHHHHHHHTC---------------------CEEECCCTTCCSSCT
T ss_pred EEEE-ccCC---HHHHHhhCCEEEEC----CCHHHHHHHHHhCC---------------------CEEEcCCCchhHHHH
Confidence 6655 5665 45677889999853 33457899999975 5666 4556666
Q ss_pred --ccc---CCcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHH
Q 004411 480 --PSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSI 534 (755)
Q Consensus 480 --~~l---~~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 534 (755)
+.+ ..|+.+++. +.++++ ++|+++ +.|+...+...+......+...++.+
T Consensus 336 ~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 392 (398)
T 3oti_A 336 AREAVSRRGIGLVSTSDKVDADLLR----RLIGDE-SLRTAAREVREEMVALPTPAETVRRI 392 (398)
T ss_dssp THHHHHHHTSEEECCGGGCCHHHHH----HHHHCH-HHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHCCCEEeeCCCCCCHHHHH----HHHcCH-HHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 666 248888876 455555 777753 33343333445555566666555533
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=95.22 E-value=0.086 Score=57.23 Aligned_cols=101 Identities=12% Similarity=0.016 Sum_probs=63.6
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCC----CCc
Q 004411 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF----IGC 478 (755)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~----~G~ 478 (755)
.|.+. +.++.. .++..||++|..+ |. .+..|++++|. |+|+--+ ...
T Consensus 298 ~v~~~-~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~---------------------P~v~~p~~~~q~~~ 348 (415)
T 3rsc_A 298 NVEAH-RWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWGR---------------------PLVVVPQSFDVQPM 348 (415)
T ss_dssp TEEEE-SCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTTC---------------------CEEECCCSGGGHHH
T ss_pred cEEEE-ecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhCC---------------------CEEEeCCcchHHHH
Confidence 36654 567665 7888999988765 44 45689999975 5555222 223
Q ss_pred cccc---CCcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh-hhcCHHHHHHHH
Q 004411 479 SPSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSI 534 (755)
Q Consensus 479 ~~~l---~~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~ 534 (755)
+..+ ..|+.+++. +.++++++|.++|+++ +.+.++++..+.+ ....+.+.++.+
T Consensus 349 a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i 408 (415)
T 3rsc_A 349 ARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADP--ALLARVEAMRGHVRRAGGAARAADAV 408 (415)
T ss_dssp HHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3333 247888876 8899999999999874 3344444444434 334444444433
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.18 E-value=0.011 Score=56.81 Aligned_cols=49 Identities=14% Similarity=0.327 Sum_probs=38.3
Q ss_pred ccCceEEEecCCCcCCCCCC--------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCC
Q 004411 582 KTNSRLILLDYDGTVMPQTS--------EDKRPSTEVLSILNDLCNDPKNAVFIVSGR 631 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~--------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR 631 (755)
.+..|++++|+||||....+ ....+.+.+.++|++|.+. +..++|+|+.
T Consensus 11 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-G~~l~i~Tn~ 67 (176)
T 2fpr_A 11 GSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA-GYKLVMITNQ 67 (176)
T ss_dssp --CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT-TEEEEEEEEC
T ss_pred CCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHC-CCEEEEEECC
Confidence 46789999999999987521 1245668999999999974 8899999998
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.02 E-value=0.013 Score=57.03 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=25.2
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhh
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f 640 (755)
+.+.+.++|++|.+.++..++|+|+++...++..+
T Consensus 74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l 108 (193)
T 2i7d_A 74 PIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVG 108 (193)
T ss_dssp BCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHH
T ss_pred cCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHH
Confidence 45788889999985226788999998876544443
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=94.30 E-value=0.02 Score=57.01 Aligned_cols=34 Identities=18% Similarity=0.175 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.++|+.|.+. +..++|+|+.+...++..+..
T Consensus 108 ~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~ 141 (240)
T 2no4_A 108 PDAAETLEKLKSA-GYIVAILSNGNDEMLQAALKA 141 (240)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHh
Confidence 5677788888864 889999999998887777754
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=94.19 E-value=0.061 Score=53.16 Aligned_cols=36 Identities=3% Similarity=0.027 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.+.+.++|+.|.+ .+..++|+||.....++.++..+
T Consensus 94 ~~g~~~~l~~l~~-~g~~~~ivS~~~~~~~~~~~~~~ 129 (232)
T 3fvv_A 94 TVQAVDVVRGHLA-AGDLCALVTATNSFVTAPIARAF 129 (232)
T ss_dssp CHHHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHc
Confidence 5678889999987 48899999999998888887654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=94.14 E-value=0.019 Score=56.60 Aligned_cols=55 Identities=18% Similarity=0.270 Sum_probs=35.6
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHH-hcCCCCcEEEEcCCChhh-HHhhhcC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDL-CNDPKNAVFIVSGRGKDS-LGNWFSG 642 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L-~~d~~~~V~IvSGR~~~~-L~~~f~~ 642 (755)
.|+|+||+||||++. .....+.+.++++++ -......+..++||+... +..++..
T Consensus 4 ~k~iifDlDGTL~d~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~ 60 (234)
T 2hcf_A 4 RTLVLFDIDGTLLKV---ESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 60 (234)
T ss_dssp CEEEEECCBTTTEEE---CTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHT
T ss_pred ceEEEEcCCCCcccC---ccchHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHH
Confidence 689999999999983 333445666777774 322223466889999876 5666654
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=93.91 E-value=0.031 Score=55.66 Aligned_cols=60 Identities=20% Similarity=0.191 Sum_probs=41.6
Q ss_pred cCceEEEecCCCcCCCCCC----CCC---CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 583 TNSRLILLDYDGTVMPQTS----EDK---RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~----~~~---~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.+.|+|+||+||||++... ... .....---+|+.|.+ .+..++|+||+....++..+..+
T Consensus 47 ~~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~~L~~L~~-~G~~l~I~T~~~~~~~~~~l~~l 113 (211)
T 3ij5_A 47 ANIRLLICDVDGVMSDGLIYMGNQGEELKAFNVRDGYGIRCLIT-SDIDVAIITGRRAKLLEDRANTL 113 (211)
T ss_dssp TTCSEEEECCTTTTSSSEEEEETTSCEEEEEEHHHHHHHHHHHH-TTCEEEEECSSCCHHHHHHHHHH
T ss_pred hCCCEEEEeCCCCEECCHHHHhhhhHHHHHhccchHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHc
Confidence 3579999999999997321 000 000111117888887 48999999999999888887653
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=93.56 E-value=0.058 Score=52.81 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.+.++|+.|.+. +..++|+|+.....++..+..
T Consensus 97 ~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~ 132 (230)
T 3um9_A 97 PFADVPQALQQLRAA-GLKTAILSNGSRHSIRQVVGN 132 (230)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhC-CCeEEEEeCCCHHHHHHHHHH
Confidence 346677888998864 789999999998887777653
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=93.28 E-value=0.12 Score=52.96 Aligned_cols=35 Identities=11% Similarity=0.185 Sum_probs=28.5
Q ss_pred CCHHHHHHHHHHhcCCCC--cEEEEcCCChhhHHhhhc
Q 004411 606 PSTEVLSILNDLCNDPKN--AVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~--~V~IvSGR~~~~L~~~f~ 641 (755)
+.+.+.++|+.|.+. +. .++|+|+.....++..+.
T Consensus 143 ~~p~~~~~L~~L~~~-g~~~~l~i~Tn~~~~~~~~~l~ 179 (282)
T 3nuq_A 143 PDIPLRNMLLRLRQS-GKIDKLWLFTNAYKNHAIRCLR 179 (282)
T ss_dssp CCHHHHHHHHHHHHS-SSCSEEEEECSSCHHHHHHHHH
T ss_pred cChhHHHHHHHHHhC-CCCceEEEEECCChHHHHHHHH
Confidence 467788999999874 77 899999999887776665
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=93.25 E-value=0.031 Score=54.28 Aligned_cols=35 Identities=6% Similarity=0.120 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
.+.+.++|+.|.+ .+..++|+|+.....++..+..
T Consensus 72 ~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~ 106 (205)
T 3m9l_A 72 APGAVELVRELAG-RGYRLGILTRNARELAHVTLEA 106 (205)
T ss_dssp CTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHH
T ss_pred CccHHHHHHHHHh-cCCeEEEEeCCchHHHHHHHHH
Confidence 4567788999987 4789999999999888777754
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=93.23 E-value=0.033 Score=57.24 Aligned_cols=58 Identities=16% Similarity=0.256 Sum_probs=43.0
Q ss_pred CceEEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChh----hH
Q 004411 584 NSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKD----SL 636 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~----~L 636 (755)
++.+|+||+||||+...+ ....+-+.+.++|+.|.+ .|..++|+|||+.. ..
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~-~G~~i~ivTgR~~~~~r~~T 135 (260)
T 3pct_A 57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNA-NGGTMFFVSNRRDDVEKAGT 135 (260)
T ss_dssp -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHH-TTCEEEEEEEEETTTSHHHH
T ss_pred CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccccHHHH
Confidence 446999999999997421 113445788999999997 48999999999754 66
Q ss_pred HhhhcC
Q 004411 637 GNWFSG 642 (755)
Q Consensus 637 ~~~f~~ 642 (755)
.+++..
T Consensus 136 ~~~L~~ 141 (260)
T 3pct_A 136 VDDMKR 141 (260)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=93.06 E-value=0.042 Score=60.53 Aligned_cols=49 Identities=20% Similarity=0.344 Sum_probs=38.3
Q ss_pred cCceEEEecCCCcCCCCCCC--------C-CCCCHHHHHHHHHHhcCCCCcEEEEcCCC
Q 004411 583 TNSRLILLDYDGTVMPQTSE--------D-KRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~--------~-~~p~~~~~~~L~~L~~d~~~~V~IvSGR~ 632 (755)
.+.|+++||+||||....+. . ..+.+.+.++|+.|.+. |..++|+|+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHT-TCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHC-CCeEEEEeCCc
Confidence 45799999999999863211 1 13568899999999974 89999999966
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=93.00 E-value=0.033 Score=57.30 Aligned_cols=59 Identities=14% Similarity=0.218 Sum_probs=43.9
Q ss_pred cCceEEEecCCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh----hh
Q 004411 583 TNSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK----DS 635 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~-----------------------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~----~~ 635 (755)
.++.+|+||+||||+...+ ....+-+.+.++|+.|.+ .|..++|+|||+. +.
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~-~G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNS-HNGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHH-TTEEEEEEEEEETTTTHHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccchHHH
Confidence 4567999999999997431 022344678889999997 4899999999975 46
Q ss_pred HHhhhcC
Q 004411 636 LGNWFSG 642 (755)
Q Consensus 636 L~~~f~~ 642 (755)
..+++..
T Consensus 135 T~~~L~~ 141 (262)
T 3ocu_A 135 TIDDMKR 141 (262)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666653
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=92.89 E-value=0.044 Score=53.31 Aligned_cols=36 Identities=14% Similarity=0.039 Sum_probs=28.8
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.+.++|+.|.+ .+..++|+|+.....++..+..
T Consensus 76 ~~~~~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~ 111 (217)
T 3m1y_A 76 LFEGALELVSALKE-KNYKVVCFSGGFDLATNHYRDL 111 (217)
T ss_dssp BCBTHHHHHHHHHT-TTEEEEEEEEEEHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH-CCCEEEEEcCCchhHHHHHHHH
Confidence 44678899999986 4789999999988877777654
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=92.88 E-value=0.27 Score=53.60 Aligned_cols=135 Identities=12% Similarity=0.045 Sum_probs=79.8
Q ss_pred CceEEEEeccc-cccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004411 325 GKIVILGVDDM-DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (755)
Q Consensus 325 ~~~vil~VdRl-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~p 403 (755)
...++++.|++ +..|.+...++|++++ + .+ ++.+.++. . .+ . .... ..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~--~-~~----------~-----~~~~----~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR----VILSRGWA--D-LV----------L-----PDDG----AD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC----EEECTTCT--T-CC----------C-----SSCG----GG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce----EEEEeCCC--c-cc----------c-----cCCC----CC
Confidence 35788999999 5777777788887653 2 22 33332211 0 00 0 0000 12
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC----cc
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----CS 479 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~ 479 (755)
|. +.+.+++.+ ++..||+||.. -|. .+..|++++|. |+|+--+.+ .+
T Consensus 287 v~-~~~~~~~~~---~l~~~d~~v~~---~G~-~t~~Ea~~~G~---------------------P~i~~p~~~dQ~~na 337 (415)
T 1iir_A 287 CF-AIGEVNHQV---LFGRVAAVIHH---GGA-GTTHVAARAGA---------------------PQILLPQMADQPYYA 337 (415)
T ss_dssp EE-ECSSCCHHH---HGGGSSEEEEC---CCH-HHHHHHHHHTC---------------------CEEECCCSTTHHHHH
T ss_pred EE-EeCcCChHH---HHhhCCEEEeC---CCh-hHHHHHHHcCC---------------------CEEECCCCCccHHHH
Confidence 55 446788754 47999999974 354 57889999975 566655433 23
Q ss_pred ccc---CCcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh
Q 004411 480 PSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYI 522 (755)
Q Consensus 480 ~~l---~~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 522 (755)
..+ ..|+.+++. +.++++++|.++ +. + +.++++++..+.+
T Consensus 338 ~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~-~~~~~~~~~~~~~ 382 (415)
T 1iir_A 338 GRVAELGVGVAHDGPIPTFDSLSAALATA-LT-P-ETHARATAVAGTI 382 (415)
T ss_dssp HHHHHHTSEEECSSSSCCHHHHHHHHHHH-TS-H-HHHHHHHHHHHHS
T ss_pred HHHHHCCCcccCCcCCCCHHHHHHHHHHH-cC-H-HHHHHHHHHHHHH
Confidence 333 247888764 789999999999 65 3 3344444443333
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=92.73 E-value=0.087 Score=53.50 Aligned_cols=36 Identities=8% Similarity=-0.053 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.+.++|+.|.+. +..++|+||+....++..+..
T Consensus 145 ~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~~ 180 (280)
T 3skx_A 145 IRPESREAISKLKAI-GIKCMMLTGDNRFVAKWVAEE 180 (280)
T ss_dssp ECTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHH
Confidence 346778899999874 889999999999988877764
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=92.56 E-value=0.082 Score=56.88 Aligned_cols=45 Identities=20% Similarity=0.310 Sum_probs=36.0
Q ss_pred cCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC
Q 004411 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~ 632 (755)
++.+.+++|+||||... ..+-+...+.|+.|.+ .+..++++|+++
T Consensus 11 ~~~~~~l~D~DGvl~~g----~~~~p~a~~~l~~l~~-~g~~~~~vTNn~ 55 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFRG----KKPIAGASDALKLLNR-NKIPYILLTNGG 55 (352)
T ss_dssp -CCEEEEECCBTTTEET----TEECTTHHHHHHHHHH-TTCCEEEECSCC
T ss_pred ccCCEEEEECCCeeEcC----CeeCcCHHHHHHHHHH-CCCEEEEEeCCC
Confidence 36899999999999973 2344678889999987 488999999765
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=92.31 E-value=0.062 Score=52.92 Aligned_cols=48 Identities=6% Similarity=0.139 Sum_probs=36.8
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHH-HHHHHHHhcCCCCcEEEEcCCChhh
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEV-LSILNDLCNDPKNAVFIVSGRGKDS 635 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~-~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (755)
+.|+|+||+||||++ ......+.+ .++++++... ...+...+|++...
T Consensus 24 ~~k~i~fDlDGTL~d---~~~~~~~~~~~~~~~~~g~~-~~~~~~~~g~~~~~ 72 (231)
T 3kzx_A 24 QPTAVIFDWYNTLID---TSINIDRTTFYQVLDQMGYK-NIDLDSIPNSTIPK 72 (231)
T ss_dssp CCSEEEECTBTTTEE---TTSSCCHHHHHHHHHHTTCC-CCCCTTSCTTTHHH
T ss_pred CCCEEEECCCCCCcC---CchhHHHHHHHHHHHHcCCC-HHHHHHHhCccHHH
Confidence 579999999999998 345567778 8899887753 45566778887654
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=92.31 E-value=0.04 Score=55.31 Aligned_cols=52 Identities=15% Similarity=0.057 Sum_probs=32.9
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcE--EE-------------EcCCChhhHHhh
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAV--FI-------------VSGRGKDSLGNW 639 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V--~I-------------vSGR~~~~L~~~ 639 (755)
+.|+|++|+||||++. .....+.+.++++++.+ .+..+ .+ .+||+...+.+.
T Consensus 12 ~~k~iifDlDGTL~d~---~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 78 (251)
T 2pke_A 12 AIQLVGFDGDDTLWKS---EDYYRTAEADFEAILSG-YLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLS 78 (251)
T ss_dssp SCCEEEECCBTTTBCC---HHHHHHHHHHHHHHHTT-TCCC-----CTTHHHHHHHHHHHHCSSHHHHHHH
T ss_pred ceeEEEEeCCCCCccC---cHhHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHhhhhhhccCcchHHHHH
Confidence 3689999999999983 33334556667777664 35555 12 568887654443
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=92.20 E-value=0.051 Score=53.54 Aligned_cols=34 Identities=24% Similarity=0.185 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.++|+.|.+ .+..++|+|+.+...++..+..
T Consensus 98 ~~~~~~l~~l~~-~g~~~~i~t~~~~~~~~~~l~~ 131 (232)
T 1zrn_A 98 SEVPDSLRELKR-RGLKLAILSNGSPQSIDAVVSH 131 (232)
T ss_dssp TTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHH
T ss_pred ccHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHh
Confidence 456778888886 4789999999998888777754
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=92.18 E-value=0.095 Score=55.49 Aligned_cols=37 Identities=19% Similarity=0.023 Sum_probs=30.2
Q ss_pred CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 605 ~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
.+.+.+.++|+.|.+. |..++|+||.....++..+..
T Consensus 179 ~l~pg~~e~L~~Lk~~-G~~v~IvSn~~~~~~~~~l~~ 215 (317)
T 4eze_A 179 TLSPGLLTILPVIKAK-GFKTAIISGGLDIFTQRLKAR 215 (317)
T ss_dssp CBCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHH
T ss_pred EECcCHHHHHHHHHhC-CCEEEEEeCccHHHHHHHHHH
Confidence 3556788999999974 899999999998887777654
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=92.03 E-value=0.013 Score=57.60 Aligned_cols=53 Identities=11% Similarity=0.016 Sum_probs=37.3
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
.|+|+||+||||++. ....++....+++.+... +..+..++||.+..+.+.+.
T Consensus 2 ik~i~fDlDGTL~~~---~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 54 (230)
T 3vay_A 2 IKLVTFDLDDTLWDT---APAIVGAEAALRDWLAEQ-APKLGPVPVEHLWEIRSRLL 54 (230)
T ss_dssp CCEEEECCBTTTBCS---HHHHHHHHHHHHHHHHHH-CTTTCSCCHHHHHHHHHHHH
T ss_pred eeEEEecCcccCcCC---chHHHHHHHHHHHHHHHh-cCcchhhHHHHHHHHHHHHH
Confidence 689999999999983 222334455666667653 55667788888887777654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=91.88 E-value=0.16 Score=51.27 Aligned_cols=33 Identities=12% Similarity=0.025 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+.+.++|+.|.+ .+..++|+|+.....++..+.
T Consensus 114 ~~~~~~l~~l~~-~g~~~~i~tn~~~~~~~~~l~ 146 (277)
T 3iru_A 114 PGWKEVFDKLIA-QGIKVGGNTGYGPGMMAPALI 146 (277)
T ss_dssp TTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHH
T ss_pred cCHHHHHHHHHH-cCCeEEEEeCCchHHHHHHHH
Confidence 345667888886 478899999999877766664
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=91.85 E-value=0.12 Score=52.03 Aligned_cols=32 Identities=19% Similarity=0.185 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.++|+.|. +..++|+|+.+...++..+..
T Consensus 96 ~~~~~~l~~l~---g~~~~i~t~~~~~~~~~~l~~ 127 (253)
T 1qq5_A 96 PDAAQCLAELA---PLKRAILSNGAPDMLQALVAN 127 (253)
T ss_dssp TTHHHHHHHHT---TSEEEEEESSCHHHHHHHHHH
T ss_pred ccHHHHHHHHc---CCCEEEEeCcCHHHHHHHHHH
Confidence 45666777776 678999999998887777654
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=91.76 E-value=0.11 Score=51.02 Aligned_cols=34 Identities=18% Similarity=0.092 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.++|+.|.+ .+..++|+|+.....++..+..
T Consensus 102 ~~~~~~l~~l~~-~g~~~~i~t~~~~~~~~~~l~~ 135 (233)
T 3umb_A 102 PENVPVLRQLRE-MGLPLGILSNGNPQMLEIAVKS 135 (233)
T ss_dssp TTHHHHHHHHHT-TTCCEEEEESSCHHHHHHHHHT
T ss_pred CCHHHHHHHHHh-CCCcEEEEeCCCHHHHHHHHHH
Confidence 456677888886 4789999999999888777754
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=91.16 E-value=1.4 Score=47.80 Aligned_cols=94 Identities=9% Similarity=-0.007 Sum_probs=61.3
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC----cc
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----CS 479 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~ 479 (755)
|.+. +.+++. .+|..||++|.. -|. .+..|++++|. |+|+.-+.+ .+
T Consensus 307 v~~~-~~~~~~---~~l~~~d~~v~~---~G~-~t~~Ea~~~G~---------------------P~i~~p~~~dQ~~na 357 (424)
T 2iya_A 307 VEVH-QWVPQL---DILTKASAFITH---AGM-GSTMEALSNAV---------------------PMVAVPQIAEQTMNA 357 (424)
T ss_dssp EEEE-SSCCHH---HHHTTCSEEEEC---CCH-HHHHHHHHTTC---------------------CEEECCCSHHHHHHH
T ss_pred eEEe-cCCCHH---HHHhhCCEEEEC---Cch-hHHHHHHHcCC---------------------CEEEecCccchHHHH
Confidence 5544 577765 689999998764 343 57889999975 566655432 12
Q ss_pred ccc---CCcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHH
Q 004411 480 PSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVA 528 (755)
Q Consensus 480 ~~l---~~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 528 (755)
..+ ..|+.+++. +.++++++|.++|+.+ +.+.+.++..+.+...+..
T Consensus 358 ~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~ 409 (424)
T 2iya_A 358 ERIVELGLGRHIPRDQVTAEKLREAVLAVASDP--GVAERLAAVRQEIREAGGA 409 (424)
T ss_dssp HHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCcH
Confidence 223 247788765 8899999999999864 3444555555555444433
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=91.10 E-value=0.067 Score=51.53 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHh
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGN 638 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~ 638 (755)
.+.+.++|+.|.+. +..++|+|+.+...++.
T Consensus 93 ~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~ 123 (206)
T 2b0c_A 93 RPEVIAIMHKLREQ-GHRVVVLSNTNRLHTTF 123 (206)
T ss_dssp CHHHHHHHHHHHHT-TCEEEEEECCCCCTTSC
T ss_pred CccHHHHHHHHHHC-CCeEEEEECCChHHHHH
Confidence 45677778887753 77788888876655443
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=90.38 E-value=0.067 Score=51.61 Aligned_cols=32 Identities=9% Similarity=0.216 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.+ |+.|.+ . ..++|+|+.+...++..+..
T Consensus 77 ~~~~~-l~~l~~-~-~~~~i~t~~~~~~~~~~l~~ 108 (201)
T 2w43_A 77 EDTKY-LKEISE-I-AEVYALSNGSINEVKQHLER 108 (201)
T ss_dssp GGGGG-HHHHHH-H-SEEEEEESSCHHHHHHHHHH
T ss_pred CChHH-HHHHHh-C-CeEEEEeCcCHHHHHHHHHH
Confidence 44456 777775 3 78999999998887777654
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=90.04 E-value=0.2 Score=49.08 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.+.+.++|+.|.+. +..++|+||.....++..+...
T Consensus 88 ~~g~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~l~~~ 123 (225)
T 1nnl_A 88 TPGIRELVSRLQER-NVQVFLISGGFRSIVEHVASKL 123 (225)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHHHc
Confidence 45677889999874 8899999999998888777643
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=89.76 E-value=1.6 Score=51.50 Aligned_cols=175 Identities=14% Similarity=0.116 Sum_probs=107.0
Q ss_pred CceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004411 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (755)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV 404 (755)
+..++.+.-++ .|=-+..+..+.++|++-|+.+ |++...+. ... +.+.+.+.+ +|.. -..|
T Consensus 522 ~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~----~~l~~~~~~----~gi~-~~r~ 582 (723)
T 4gyw_A 522 DAIVYCNFNQL--YKIDPSTLQMWANILKRVPNSV----LWLLRFPA----VGE----PNIQQYAQN----MGLP-QNRI 582 (723)
T ss_dssp TSEEEECCSCG--GGCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGH----HHHHHHHHH----TTCC-GGGE
T ss_pred CCEEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHH----HHHHHHHHh----cCCC-cCeE
Confidence 44455555666 4556889999999999999876 76665432 111 223333333 2432 1347
Q ss_pred EEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCc-----c
Q 004411 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC-----S 479 (755)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~-----~ 479 (755)
+|.. ..+.++..+.|+.+|||+-|--+-| +.+..||+.+|. +|+|--+.. +
T Consensus 583 ~f~~-~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~Gv----------------------Pvvt~~g~~~~sR~~ 638 (723)
T 4gyw_A 583 IFSP-VAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGT----------------------PMVTMPGETLASRVA 638 (723)
T ss_dssp EEEE-CCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHTTC----------------------CEEBCCCSSGGGTHH
T ss_pred EECC-CCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHcCC----------------------CEEEccCCCccHhHH
Confidence 7664 6789999999999999999998877 688889999964 333322111 1
Q ss_pred ccc-C--C--cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh---cCHHHHHHHHHHHHHHHHHhc
Q 004411 480 PSL-S--G--AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS---HDVAYWAKSIDQDLERACRDH 545 (755)
Q Consensus 480 ~~l-~--~--ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~~l~~l~~~~~~~ 545 (755)
.++ . | -+++ .|.++-.+.-.++-+++ +.+....+++++...+ +|...|++.|-..+...++..
T Consensus 639 ~s~l~~~gl~e~ia--~~~~~Y~~~a~~la~d~-~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~ 709 (723)
T 4gyw_A 639 ASQLTCLGCLELIA--KNRQEYEDIAVKLGTDL-EYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHY 709 (723)
T ss_dssp HHHHHHHTCGGGBC--SSHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCccccc--CCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 111 1 1 1222 35555544433344443 3444444555555544 688999998887777776553
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=89.46 E-value=0.028 Score=54.67 Aligned_cols=48 Identities=10% Similarity=0.186 Sum_probs=30.2
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcC-C-CCcEEEEcCCChhh
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCND-P-KNAVFIVSGRGKDS 635 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d-~-~~~V~IvSGR~~~~ 635 (755)
.|+|++|+||||++. ....++.+.++++++... . ...+...+|++...
T Consensus 2 ~k~i~fDlDGTL~d~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~ 51 (221)
T 2wf7_A 2 FKAVLFDLDGVITDT---AEYHFRAWKALAEEIGINGVDRQFNEQLKGVSRED 51 (221)
T ss_dssp CCEEEECCBTTTBTH---HHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHH
T ss_pred CcEEEECCCCcccCC---hHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHH
Confidence 589999999999983 233345566777776432 0 11223568887654
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=89.09 E-value=0.075 Score=51.58 Aligned_cols=50 Identities=18% Similarity=0.175 Sum_probs=30.8
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCC--CcEEEEcCCChhhH
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPK--NAVFIVSGRGKDSL 636 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~--~~V~IvSGR~~~~L 636 (755)
..|+|++|+||||++. .....+.+.++++++..... ..+...+|+.....
T Consensus 8 ~~k~i~fDlDGTL~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~ 59 (226)
T 1te2_A 8 QILAAIFDMDGLLIDS---EPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMV 59 (226)
T ss_dssp CCCEEEECCBTTTBCC---HHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHH
T ss_pred CCCEEEECCCCCcCcC---HHHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHH
Confidence 3789999999999983 22233455566666542110 12345678886653
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=89.04 E-value=0.54 Score=51.10 Aligned_cols=136 Identities=9% Similarity=0.005 Sum_probs=80.1
Q ss_pred CceEEEEecccc---ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004411 325 GKIVILGVDDMD---LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (755)
Q Consensus 325 ~~~vil~VdRld---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~ 401 (755)
...|+++.|++. ..|.+...++|++++ +.+ ++.+.+.. .. + . ....
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~----~v~~~g~~--~~-~---~------------~~~~---- 285 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRR----VILSRGWT--EL-V---L------------PDDR---- 285 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCC----EEEECTTT--TC-C---C------------SCCC----
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCe----EEEEeCCc--cc-c---c------------cCCC----
Confidence 356888899984 566666677777643 222 33332221 00 0 0 0111
Q ss_pred ccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC----
Q 004411 402 EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG---- 477 (755)
Q Consensus 402 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G---- 477 (755)
..|.+ .+.++.. .+|..||++|. +-|.| +..|++++|. |+|+--+.+
T Consensus 286 ~~v~~-~~~~~~~---~ll~~~d~~v~---~~G~~-t~~Ea~~~G~---------------------P~i~~p~~~dQ~~ 336 (416)
T 1rrv_A 286 DDCFA-IDEVNFQ---ALFRRVAAVIH---HGSAG-TEHVATRAGV---------------------PQLVIPRNTDQPY 336 (416)
T ss_dssp TTEEE-ESSCCHH---HHGGGSSEEEE---CCCHH-HHHHHHHHTC---------------------CEEECCCSBTHHH
T ss_pred CCEEE-eccCChH---HHhccCCEEEe---cCChh-HHHHHHHcCC---------------------CEEEccCCCCcHH
Confidence 12554 3577754 46799999997 45654 8899999975 455543332
Q ss_pred ccccc---CCcEEeCC--CCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhh
Q 004411 478 CSPSL---SGAIRVNP--WNVDAVADAMDSALQMENQEKILRHEKHYKYIS 523 (755)
Q Consensus 478 ~~~~l---~~ai~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 523 (755)
.+..+ ..|+.+++ .+.++++++|.++ +.+ +.++++++..+.+.
T Consensus 337 na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~--~~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 337 FAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAP--ETRARAEAVAGMVL 384 (416)
T ss_dssp HHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSH--HHHHHHHHHTTTCC
T ss_pred HHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCH--HHHHHHHHHHHHHh
Confidence 33333 24777765 5789999999999 643 44444555444443
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=88.90 E-value=0.18 Score=50.82 Aligned_cols=30 Identities=13% Similarity=0.323 Sum_probs=21.4
Q ss_pred CceEEEecCCCcCCCCCCCCC-CCCHHHHHHHHH
Q 004411 584 NSRLILLDYDGTVMPQTSEDK-RPSTEVLSILND 616 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~-~p~~~~~~~L~~ 616 (755)
+.|+|+||+||||++. .. ...+.+.+++++
T Consensus 5 ~ik~i~fDlDGTLld~---~~~~~~~~~~~~l~~ 35 (267)
T 1swv_A 5 KIEAVIFAWAGTTVDY---GCFAPLEVFMEIFHK 35 (267)
T ss_dssp CCCEEEECSBTTTBST---TCCTTHHHHHHHHHT
T ss_pred CceEEEEecCCCEEeC---CCccHHHHHHHHHHH
Confidence 4689999999999983 33 344566666655
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=88.74 E-value=0.31 Score=47.32 Aligned_cols=36 Identities=6% Similarity=-0.017 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.+.++|+.|.+ .+..++|+|+.+...+...+..
T Consensus 85 ~~pg~~~~l~~L~~-~g~~~~i~tn~~~~~~~~~l~~ 120 (216)
T 3kbb_A 85 ENPGVREALEFVKS-KRIKLALATSTPQREALERLRR 120 (216)
T ss_dssp BCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHH
T ss_pred cCccHHHHHHHHHH-cCCCcccccCCcHHHHHHHHHh
Confidence 34567788899986 4889999999998887766653
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=88.03 E-value=0.12 Score=50.35 Aligned_cols=32 Identities=16% Similarity=0.057 Sum_probs=22.9
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhc
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCN 619 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~ 619 (755)
.|+|+||+||||++. ....++.+..+++.|.+
T Consensus 8 ik~i~fDlDGTL~~~---~~~~~~~~~~~~~~l~~ 39 (234)
T 3ddh_A 8 IKVIAFDADDTLWSN---EPFFQEVEKQYTDLLKP 39 (234)
T ss_dssp CCEEEECCBTTTBCC---HHHHHHHHHHHHHHTGG
T ss_pred ccEEEEeCCCCCccC---cchHHHHHHHHHHHHHh
Confidence 699999999999983 22334455556677765
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=87.94 E-value=0.12 Score=50.96 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=21.5
Q ss_pred ccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHH
Q 004411 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L 617 (755)
..+.|+|+||+||||++. .....+.+.++++++
T Consensus 16 ~~~ik~i~fDlDGTL~d~---~~~~~~~~~~~~~~~ 48 (237)
T 4ex6_A 16 AAADRGVILDLDGTLADT---PAAIATITAEVLAAM 48 (237)
T ss_dssp -CCCEEEEECSBTTTBCC---HHHHHHHHHHHHHHT
T ss_pred cccCCEEEEcCCCCCcCC---HHHHHHHHHHHHHHc
Confidence 457899999999999983 222234445555554
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=87.52 E-value=0.1 Score=49.68 Aligned_cols=30 Identities=13% Similarity=0.254 Sum_probs=21.1
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHH
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L 617 (755)
.|+|++|+||||++. .....+.+.++++++
T Consensus 4 ~k~i~fDlDGTL~~~---~~~~~~~~~~~~~~~ 33 (207)
T 2go7_A 4 KTAFIWDLDGTLLDS---YEAILSGIEETFAQF 33 (207)
T ss_dssp CCEEEECTBTTTEEC---HHHHHHHHHHHHHHH
T ss_pred ccEEEEeCCCccccc---HHHHHHHHHHHHHHc
Confidence 689999999999983 223334555666665
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=87.46 E-value=0.097 Score=50.71 Aligned_cols=52 Identities=15% Similarity=0.078 Sum_probs=32.2
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCC---cEEEEcCCChhhHHhh
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKN---AVFIVSGRGKDSLGNW 639 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~---~V~IvSGR~~~~L~~~ 639 (755)
+.|+|++|+||||++. ....++.+.++++++... .. .+...+|++...+.+.
T Consensus 5 ~~k~v~fDlDGTL~d~---~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~ 59 (225)
T 3d6j_A 5 KYTVYLFDFDYTLADS---SRGIVTCFRSVLERHGYT-GITDDMIKRTIGKTLEESFSI 59 (225)
T ss_dssp CCSEEEECCBTTTEEC---HHHHHHHHHHHHHHTTCC-CCCHHHHHTTTTSCHHHHHHH
T ss_pred CCCEEEEeCCCCCCCC---HHHHHHHHHHHHHHhCCC-CCCHHHHHHHhCCcHHHHHHH
Confidence 3689999999999983 233345566777766532 22 2334567766554433
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=87.35 E-value=3.8 Score=44.16 Aligned_cols=138 Identities=13% Similarity=0.064 Sum_probs=81.0
Q ss_pred CCceEEEEecccc-ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004411 324 DGKIVILGVDDMD-LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (755)
Q Consensus 324 ~~~~vil~VdRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~ 402 (755)
+.+.|+++.|++. ..+.+...++|++++ +++ +|.++++.... . . +.. .
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~-----~-----------~----~~~--~ 268 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLG-----R-----------I----DEG--D 268 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCC-----C-----------S----SCC--T
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCcccc-----c-----------c----cCC--C
Confidence 3467888899998 566666667776553 233 33333221100 0 0 000 1
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcc---
Q 004411 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS--- 479 (755)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~--- 479 (755)
.|.+. +.++.. .++..||++|-.+ |. .+..|++++|. |+|+--+.|-.
T Consensus 269 ~v~~~-~~~~~~---~ll~~~d~~v~~g---G~-~t~~Eal~~Gv---------------------P~v~~p~~~dQ~~n 319 (404)
T 3h4t_A 269 DCLVV-GEVNHQ---VLFGRVAAVVHHG---GA-GTTTAVTRAGA---------------------PQVVVPQKADQPYY 319 (404)
T ss_dssp TEEEE-SSCCHH---HHGGGSSEEEECC---CH-HHHHHHHHHTC---------------------CEEECCCSTTHHHH
T ss_pred CEEEe-cCCCHH---HHHhhCcEEEECC---cH-HHHHHHHHcCC---------------------CEEEcCCcccHHHH
Confidence 35544 567764 4667999999654 43 45679999975 45554444421
Q ss_pred -ccc---CCcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhh
Q 004411 480 -PSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (755)
Q Consensus 480 -~~l---~~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 524 (755)
..+ ..|+.+++. +.+++++++.++|+ + +.+.++++..+.+..
T Consensus 320 a~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~--~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 320 AGRVADLGVGVAHDGPTPTVESLSAALATALT-P--GIRARAAAVAGTIRT 367 (404)
T ss_dssp HHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS-H--HHHHHHHHHHTTCCC
T ss_pred HHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC-H--HHHHHHHHHHHHHhh
Confidence 112 246777653 78999999999998 3 344455555554444
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=87.19 E-value=0.028 Score=57.77 Aligned_cols=53 Identities=19% Similarity=0.129 Sum_probs=28.3
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHh-cCCCCcEEEEcCCChhhHHhhh
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLC-NDPKNAVFIVSGRGKDSLGNWF 640 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~-~d~~~~V~IvSGR~~~~L~~~f 640 (755)
.|+|++|+||||++. .....+.+.++++++. ..+...+..++||......+.+
T Consensus 35 ik~iifDlDGTLlds---~~~~~~~~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~ 88 (275)
T 2qlt_A 35 INAALFDVDGTIIIS---QPAIAAFWRDFGKDKPYFDAEHVIHISHGWRTYDAIAKF 88 (275)
T ss_dssp ESEEEECCBTTTEEC---HHHHHHHHHHHHTTCTTCCHHHHHHHCTTCCHHHHHHHH
T ss_pred CCEEEECCCCCCCCC---HHHHHHHHHHHHHHcCCCCHHHHHHHhcCCCHHHHHHHH
Confidence 689999999999983 1112223333333332 1111123456788876544333
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=87.10 E-value=0.1 Score=49.47 Aligned_cols=14 Identities=21% Similarity=0.332 Sum_probs=13.2
Q ss_pred ceEEEecCCCcCCC
Q 004411 585 SRLILLDYDGTVMP 598 (755)
Q Consensus 585 ~rlI~lD~DGTL~~ 598 (755)
.|+|++|+||||++
T Consensus 6 ~k~i~fDlDGTL~d 19 (190)
T 2fi1_A 6 YHDYIWDLGGTLLD 19 (190)
T ss_dssp CSEEEECTBTTTBC
T ss_pred ccEEEEeCCCCcCC
Confidence 68999999999998
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=86.70 E-value=0.14 Score=49.94 Aligned_cols=16 Identities=31% Similarity=0.594 Sum_probs=14.0
Q ss_pred CceEEEecCCCcCCCC
Q 004411 584 NSRLILLDYDGTVMPQ 599 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~ 599 (755)
+.|+|++|+||||++.
T Consensus 3 ~ik~i~fDlDGTL~d~ 18 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDS 18 (229)
T ss_dssp CCSEEEECSBTTTBCC
T ss_pred CccEEEEcCCCCcCcc
Confidence 4689999999999983
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=86.15 E-value=0.15 Score=48.79 Aligned_cols=31 Identities=23% Similarity=0.281 Sum_probs=20.2
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHH
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L 617 (755)
..|+|+||+||||++. .....+.+.++++++
T Consensus 4 m~k~i~fDlDGTL~~~---~~~~~~~~~~~~~~~ 34 (214)
T 3e58_A 4 MVEAIIFDMDGVLFDT---EKYYYDRRASFLGQK 34 (214)
T ss_dssp CCCEEEEESBTTTBCC---HHHHHHHHHHHHHHT
T ss_pred cccEEEEcCCCCcccc---HHHHHHHHHHHHHHc
Confidence 5799999999999983 222233444555544
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=85.81 E-value=0.17 Score=50.17 Aligned_cols=31 Identities=16% Similarity=0.259 Sum_probs=20.2
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHH
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L 617 (755)
+.|+|+||+||||++. .....+.+.++++++
T Consensus 23 ~~k~i~fDlDGTL~d~---~~~~~~~~~~~~~~~ 53 (243)
T 3qxg_A 23 KLKAVLFDMDGVLFNS---MPYHSEAWHQVMKTH 53 (243)
T ss_dssp CCCEEEECSBTTTBCC---HHHHHHHHHHHHHHT
T ss_pred cCCEEEEcCCCCCCCC---HHHHHHHHHHHHHHh
Confidence 5799999999999983 222233444555543
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=85.74 E-value=0.15 Score=49.79 Aligned_cols=31 Identities=26% Similarity=0.331 Sum_probs=19.9
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHH
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L 617 (755)
..|+|+||+||||++. .....+.+.++++++
T Consensus 3 m~k~i~fDlDGTL~d~---~~~~~~~~~~~~~~~ 33 (226)
T 3mc1_A 3 LYNYVLFDLDGTLTDS---AEGITKSVKYSLNKF 33 (226)
T ss_dssp CCCEEEECSBTTTBCC---HHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCccccC---HHHHHHHHHHHHHHc
Confidence 3689999999999983 222234444455444
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=85.62 E-value=0.14 Score=49.94 Aligned_cols=31 Identities=10% Similarity=-0.024 Sum_probs=21.0
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHh
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLC 618 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~ 618 (755)
.|+|++|+||||++. .....+.+.++++++.
T Consensus 4 ~k~i~fDlDGTL~d~---~~~~~~~~~~~~~~~g 34 (235)
T 2om6_A 4 VKLVTFDVWNTLLDL---NIMLDEFSHQLAKISG 34 (235)
T ss_dssp CCEEEECCBTTTBCH---HHHHHHHHHHHHHHHT
T ss_pred ceEEEEeCCCCCCCc---chhHHHHHHHHHHHcC
Confidence 589999999999983 2223345556666553
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=85.49 E-value=0.27 Score=53.75 Aligned_cols=37 Identities=16% Similarity=0.007 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.+.++|+.|.+. |..++|+||.....++..+..+
T Consensus 257 ~~pg~~e~l~~Lk~~-G~~~~ivS~~~~~~~~~~~~~l 293 (415)
T 3p96_A 257 LMPGARTTLRTLRRL-GYACGVVSGGFRRIIEPLAEEL 293 (415)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred cCccHHHHHHHHHHC-CCEEEEEcCCcHHHHHHHHHHc
Confidence 456778899999874 8899999999888877776543
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=85.49 E-value=0.47 Score=48.99 Aligned_cols=68 Identities=9% Similarity=0.040 Sum_probs=52.8
Q ss_pred HHHHHHhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 574 HHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 574 ~~i~~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+...+.|.....++|++|+||++...-.....+.+.+.++|+.|.+ .+..++|+||++...++..+..
T Consensus 132 ~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~ 199 (287)
T 3a1c_A 132 ELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRE 199 (287)
T ss_dssp HHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHH
Confidence 4556667767789999999999864211234567889999999997 4889999999999988877764
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=85.37 E-value=0.3 Score=46.73 Aligned_cols=16 Identities=38% Similarity=0.796 Sum_probs=14.3
Q ss_pred CceEEEecCCCcCCCC
Q 004411 584 NSRLILLDYDGTVMPQ 599 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~ 599 (755)
+.|+|+||+||||++.
T Consensus 4 ~~k~i~fDlDGTL~d~ 19 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNN 19 (211)
T ss_dssp CCEEEEEECCCCCBSS
T ss_pred CCcEEEEeCCCCCCCc
Confidence 5789999999999984
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.10 E-value=0.63 Score=45.48 Aligned_cols=60 Identities=8% Similarity=0.029 Sum_probs=45.1
Q ss_pred ccCceEEEecCCCcCCCCCC--CC------------------CCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 582 KTNSRLILLDYDGTVMPQTS--ED------------------KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~--~~------------------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
..+++.++||+||||+.... .. ...-+.+.+.|+.|.+ ...++|+|.......+..+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~--~~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQ--LFECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHc--CCeEEEEcCCCHHHHHHHHH
Confidence 45788999999999996421 10 1224688899999997 38899999999998877775
Q ss_pred CC
Q 004411 642 GV 643 (755)
Q Consensus 642 ~i 643 (755)
.+
T Consensus 103 ~l 104 (195)
T 2hhl_A 103 LL 104 (195)
T ss_dssp HH
T ss_pred Hh
Confidence 43
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=85.03 E-value=0.15 Score=50.06 Aligned_cols=14 Identities=21% Similarity=0.598 Sum_probs=13.1
Q ss_pred ceEEEecCCCcCCC
Q 004411 585 SRLILLDYDGTVMP 598 (755)
Q Consensus 585 ~rlI~lD~DGTL~~ 598 (755)
.|+|+||+||||++
T Consensus 2 ik~i~fDlDGTL~d 15 (233)
T 3nas_A 2 LKAVIFDLDGVITD 15 (233)
T ss_dssp CCEEEECSBTTTBC
T ss_pred CcEEEECCCCCcCC
Confidence 68999999999998
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=84.72 E-value=0.16 Score=49.74 Aligned_cols=15 Identities=33% Similarity=0.594 Sum_probs=13.8
Q ss_pred CceEEEecCCCcCCC
Q 004411 584 NSRLILLDYDGTVMP 598 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~ 598 (755)
+.|+|+||+||||++
T Consensus 6 ~~k~i~fDlDGTL~d 20 (238)
T 3ed5_A 6 RYRTLLFDVDDTILD 20 (238)
T ss_dssp CCCEEEECCBTTTBC
T ss_pred cCCEEEEcCcCcCcC
Confidence 479999999999997
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=84.54 E-value=0.2 Score=49.40 Aligned_cols=31 Identities=16% Similarity=0.336 Sum_probs=20.0
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHH
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L 617 (755)
+.|+|+||+||||++. .....+.+.++++++
T Consensus 22 ~~k~i~fDlDGTL~d~---~~~~~~~~~~~~~~~ 52 (247)
T 3dv9_A 22 DLKAVLFDMDGVLFDS---MPNHAESWHKIMKRF 52 (247)
T ss_dssp CCCEEEEESBTTTBCC---HHHHHHHHHHHHHHT
T ss_pred CCCEEEECCCCccCcC---HHHHHHHHHHHHHHc
Confidence 5799999999999983 222223444455443
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=84.49 E-value=0.13 Score=51.14 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=20.1
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHH
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L 617 (755)
+.|+|+||+||||++. .....+.+.++++++
T Consensus 21 ~ik~i~fDlDGTL~d~---~~~~~~~~~~~~~~~ 51 (254)
T 3umc_A 21 GMRAILFDVFGTLVDW---RSSLIEQFQALEREL 51 (254)
T ss_dssp SCCEEEECCBTTTEEH---HHHHHHHHHHHHHHS
T ss_pred CCcEEEEeCCCccEec---CccHHHHHHHHHHHh
Confidence 5799999999999973 222234444444443
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=84.41 E-value=0.17 Score=50.05 Aligned_cols=15 Identities=47% Similarity=0.603 Sum_probs=13.9
Q ss_pred CceEEEecCCCcCCC
Q 004411 584 NSRLILLDYDGTVMP 598 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~ 598 (755)
+.|+|+||+||||++
T Consensus 14 ~~k~i~fDlDGTL~d 28 (254)
T 3umg_A 14 NVRAVLFDTFGTVVD 28 (254)
T ss_dssp BCCEEEECCBTTTBC
T ss_pred CceEEEEeCCCceec
Confidence 579999999999998
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=84.16 E-value=0.74 Score=49.30 Aligned_cols=89 Identities=8% Similarity=-0.069 Sum_probs=54.6
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC----cc
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----CS 479 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~ 479 (755)
+. +.+.+|+. .++..||+||. +-|+| +..|++++|. |+|+--+.+ .+
T Consensus 290 v~-~~~~~p~~---~lL~~~~~~v~---h~G~~-s~~Eal~~Gv---------------------P~v~~P~~~dQ~~na 340 (400)
T 4amg_A 290 VR-VVEWIPLG---ALLETCDAIIH---HGGSG-TLLTALAAGV---------------------PQCVIPHGSYQDTNR 340 (400)
T ss_dssp EE-EECCCCHH---HHHTTCSEEEE---CCCHH-HHHHHHHHTC---------------------CEEECCC---CHHHH
T ss_pred EE-EEeecCHH---HHhhhhhheec---cCCcc-HHHHHHHhCC---------------------CEEEecCcccHHHHH
Confidence 44 34577765 45688999874 44666 5679999975 555533332 23
Q ss_pred ccc---CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhc
Q 004411 480 PSL---SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 480 ~~l---~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (755)
..+ .-|+.+++. +.++++|.++|+++ +-+++.+++.+.+...
T Consensus 341 ~~v~~~G~g~~l~~~--~~~~~al~~lL~d~--~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 341 DVLTGLGIGFDAEAG--SLGAEQCRRLLDDA--GLREAALRVRQEMSEM 385 (400)
T ss_dssp HHHHHHTSEEECCTT--TCSHHHHHHHHHCH--HHHHHHHHHHHHHHTS
T ss_pred HHHHHCCCEEEcCCC--CchHHHHHHHHcCH--HHHHHHHHHHHHHHcC
Confidence 333 236677654 44688999999865 3444555666666554
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=83.86 E-value=0.58 Score=44.59 Aligned_cols=29 Identities=7% Similarity=0.226 Sum_probs=19.2
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHH
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L 617 (755)
.|+|+||+||||++.. ........+++++
T Consensus 4 ~k~viFDlDGTL~d~~----~~~~~~~~~~~~~ 32 (200)
T 3cnh_A 4 IKALFWDIGGVLLTNG----WDREQRADVAQRF 32 (200)
T ss_dssp CCEEEECCBTTTBCCS----SCHHHHHHHHHHH
T ss_pred ceEEEEeCCCeeECCC----cchHHHHHHHHHc
Confidence 6899999999999842 1233444455444
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=83.46 E-value=0.19 Score=49.14 Aligned_cols=15 Identities=20% Similarity=0.441 Sum_probs=13.8
Q ss_pred CceEEEecCCCcCCC
Q 004411 584 NSRLILLDYDGTVMP 598 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~ 598 (755)
+.|+|+||+||||++
T Consensus 4 ~~k~i~fDlDGTL~d 18 (240)
T 3qnm_A 4 KYKNLFFDLDDTIWA 18 (240)
T ss_dssp CCSEEEECCBTTTBC
T ss_pred CceEEEEcCCCCCcC
Confidence 478999999999998
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=83.22 E-value=0.21 Score=48.75 Aligned_cols=16 Identities=25% Similarity=0.459 Sum_probs=14.2
Q ss_pred CceEEEecCCCcCCCC
Q 004411 584 NSRLILLDYDGTVMPQ 599 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~ 599 (755)
..|+|++|+||||++.
T Consensus 5 ~~k~i~fDlDGTL~~~ 20 (233)
T 3s6j_A 5 PQTSFIFDLDGTLTDS 20 (233)
T ss_dssp CCCEEEECCBTTTEEC
T ss_pred cCcEEEEcCCCccccC
Confidence 4799999999999983
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.01 E-value=0.2 Score=49.93 Aligned_cols=16 Identities=19% Similarity=0.459 Sum_probs=14.4
Q ss_pred cCceEEEecCCCcCCC
Q 004411 583 TNSRLILLDYDGTVMP 598 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~ 598 (755)
.+.|+|+||+||||++
T Consensus 28 ~~ik~i~fDlDGTL~d 43 (250)
T 3l5k_A 28 QPVTHLIFDMDGLLLD 43 (250)
T ss_dssp CCCSEEEEETBTTTBC
T ss_pred cCCcEEEEcCCCCcCC
Confidence 4579999999999997
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=82.98 E-value=0.75 Score=44.27 Aligned_cols=60 Identities=7% Similarity=0.048 Sum_probs=44.6
Q ss_pred ccCceEEEecCCCcCCCCCCC--C------------------CCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 582 KTNSRLILLDYDGTVMPQTSE--D------------------KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~~--~------------------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
..+++.+++|+||||+..... . ...-+.+.+.|++|.+ ...++|+|.......+..+.
T Consensus 12 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~--~~~i~I~T~~~~~~a~~vl~ 89 (181)
T 2ght_A 12 DSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE--LFECVLFTASLAKYADPVAD 89 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHh--CCCEEEEcCCCHHHHHHHHH
Confidence 346789999999999963210 0 1234678889999997 47899999999988777765
Q ss_pred CC
Q 004411 642 GV 643 (755)
Q Consensus 642 ~i 643 (755)
.+
T Consensus 90 ~l 91 (181)
T 2ght_A 90 LL 91 (181)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=82.60 E-value=0.21 Score=50.01 Aligned_cols=15 Identities=27% Similarity=0.507 Sum_probs=14.0
Q ss_pred CceEEEecCCCcCCC
Q 004411 584 NSRLILLDYDGTVMP 598 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~ 598 (755)
+.|+|+||+||||++
T Consensus 27 ~ik~i~fDlDGTL~d 41 (259)
T 4eek_A 27 PFDAVLFDLDGVLVE 41 (259)
T ss_dssp CCSEEEEESBTTTEE
T ss_pred CCCEEEECCCCCccc
Confidence 689999999999997
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=81.91 E-value=0.52 Score=45.14 Aligned_cols=36 Identities=19% Similarity=0.268 Sum_probs=26.7
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
+.+.+.++|+.|.+. +..++|+|+.....++..+..
T Consensus 83 ~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~~~~ 118 (219)
T 3kd3_A 83 LTDGIKELVQDLKNK-GFEIWIFSGGLSESIQPFADY 118 (219)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHC-CCeEEEEcCCcHHHHHHHHHH
Confidence 345567788888864 788999999888877766653
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=81.62 E-value=0.22 Score=48.63 Aligned_cols=16 Identities=19% Similarity=0.331 Sum_probs=14.1
Q ss_pred CceEEEecCCCcCCCC
Q 004411 584 NSRLILLDYDGTVMPQ 599 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~ 599 (755)
+.|+|+||+||||++.
T Consensus 5 ~~k~i~fD~DGTL~d~ 20 (240)
T 3smv_A 5 DFKALTFDCYGTLIDW 20 (240)
T ss_dssp GCSEEEECCBTTTBCH
T ss_pred cceEEEEeCCCcCcCC
Confidence 4789999999999973
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=81.26 E-value=1.7 Score=44.85 Aligned_cols=50 Identities=18% Similarity=0.286 Sum_probs=38.4
Q ss_pred CceEEEecCCCcCCCCCCC---------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChh
Q 004411 584 NSRLILLDYDGTVMPQTSE---------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKD 634 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~---------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~ 634 (755)
..+.+++|.|||+...... ...+-+.+.++|+.|.+ .|..++|+|||+..
T Consensus 158 ~~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~-~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 158 KPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRESG 216 (301)
T ss_dssp SCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSCCC
T ss_pred ccceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHH-CCCeEEEEeCCCcc
Confidence 3467889999998764211 12346899999999997 48999999999854
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=81.16 E-value=0.27 Score=48.07 Aligned_cols=14 Identities=29% Similarity=0.399 Sum_probs=13.1
Q ss_pred ceEEEecCCCcCCC
Q 004411 585 SRLILLDYDGTVMP 598 (755)
Q Consensus 585 ~rlI~lD~DGTL~~ 598 (755)
+|+|+||+||||++
T Consensus 2 ik~i~fDlDGTL~d 15 (234)
T 3u26_A 2 IRAVFFDSLGTLNS 15 (234)
T ss_dssp CCEEEECSTTTTBC
T ss_pred CcEEEEcCCCcccc
Confidence 58999999999998
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=80.96 E-value=0.3 Score=48.38 Aligned_cols=14 Identities=29% Similarity=0.624 Sum_probs=13.0
Q ss_pred ceEEEecCCCcCCC
Q 004411 585 SRLILLDYDGTVMP 598 (755)
Q Consensus 585 ~rlI~lD~DGTL~~ 598 (755)
.|+|+||+||||++
T Consensus 2 ~k~iiFDlDGTL~d 15 (241)
T 2hoq_A 2 VKVIFFDLDDTLVD 15 (241)
T ss_dssp CCEEEECSBTTTBC
T ss_pred ccEEEEcCCCCCCC
Confidence 57999999999998
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=80.93 E-value=0.31 Score=47.42 Aligned_cols=14 Identities=36% Similarity=0.619 Sum_probs=13.1
Q ss_pred ceEEEecCCCcCCC
Q 004411 585 SRLILLDYDGTVMP 598 (755)
Q Consensus 585 ~rlI~lD~DGTL~~ 598 (755)
.|+|+||+||||++
T Consensus 4 ~k~viFDlDGTL~d 17 (210)
T 2ah5_A 4 ITAIFFDLDGTLVD 17 (210)
T ss_dssp CCEEEECSBTTTEE
T ss_pred CCEEEEcCCCcCcc
Confidence 68999999999998
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=80.80 E-value=0.24 Score=47.73 Aligned_cols=15 Identities=27% Similarity=0.547 Sum_probs=13.4
Q ss_pred CceEEEecCCCcCCC
Q 004411 584 NSRLILLDYDGTVMP 598 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~ 598 (755)
+.|+|++|+||||++
T Consensus 3 ~~k~iifDlDGTL~d 17 (209)
T 2hdo_A 3 TYQALMFDIDGTLTN 17 (209)
T ss_dssp CCSEEEECSBTTTEE
T ss_pred cccEEEEcCCCCCcC
Confidence 358999999999998
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 755 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-117 | |
| d1u02a_ | 229 | c.108.1.15 (A:) Trehalose-6-phosphate phosphatase | 6e-16 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-05 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 4e-05 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 3e-04 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 358 bits (918), Expect = e-117
Identities = 134/489 (27%), Positives = 228/489 (46%), Gaps = 38/489 (7%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQ 111
R ++V+N++ E ++ G L + + G ++ G ++
Sbjct: 2 RLVVVSNRIAPP--DEHAASAGG-------LAVGIL-GALKAAGGLWFGWSGETG--NED 49
Query: 112 EEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQA 171
+ + + L +YY+ F LWP FHY L L +F R W
Sbjct: 50 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDG 104
Query: 172 YLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIY 231
YL N + ADK++ ++ D D +WIHDYHL+ LRKR ++GFFLH PFP+ EI+
Sbjct: 105 YLRVNALLADKLLPLLQDD-DIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 163
Query: 232 RTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291
LP D +L+ L + DL+GF T + FL S + + S + + +G+
Sbjct: 164 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 220
Query: 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351
++ P+GI + + + K+ +LK + I V+ +D KG+ +FLA L
Sbjct: 221 EVYPIGIEPKEIAKQAAGPLP-PKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 279
Query: 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411
LE++P GK+ QI +R + QD+ A IN +G+ G+ P+ + +
Sbjct: 280 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 339
Query: 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471
+ + + ++ +V +RDGMNLV +Y ++ P V++
Sbjct: 340 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQD----------------PANPGVLV 383
Query: 472 VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531
+S+F G + L+ A+ VNP++ D VA A+D AL M E+I RH + I +D+ +W
Sbjct: 384 LSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQ 443
Query: 532 KSIDQDLER 540
+ DL++
Sbjct: 444 ECFISDLKQ 452
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 75.4 bits (184), Expect = 6e-16
Identities = 32/163 (19%), Positives = 60/163 (36%), Gaps = 11/163 (6%)
Query: 587 LILLDYDGTVMP--QTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE 644
LI LDYDGT++P E+ +LS+++DL + +IV+GR + + +
Sbjct: 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLK--ERFDTYIVTGRSPEEISRFL--PL 57
Query: 645 KLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVW 704
+ + HG R + + + G I K A+++
Sbjct: 58 DINMICYHGAC-SKINGQIVYNNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLY 116
Query: 705 HHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKP 747
H +L +E + V G+ I+E++
Sbjct: 117 HLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRV 155
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.0 bits (105), Expect = 1e-05
Identities = 23/169 (13%), Positives = 55/169 (32%), Gaps = 18/169 (10%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK 645
RL +D DG + T D+ ST+ + + V ++SG + ++
Sbjct: 4 RLAAIDVDGNL---TDRDRLISTKAIESIRSA-EKKGLTVSLLSGN---VIPVVYALKIF 56
Query: 646 LGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWH 705
LG+ +G + ++ + F E ++ ++ T I
Sbjct: 57 LGI---NGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSI--------LT 105
Query: 706 HQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754
++ + G E +D++ + V+ + + +
Sbjct: 106 NRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAF 154
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 43.5 bits (101), Expect = 4e-05
Identities = 22/170 (12%), Positives = 47/170 (27%), Gaps = 16/170 (9%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK 645
+ I +D DGT+ T ++ + L + + +V+G
Sbjct: 3 KAISIDIDGTI---TYPNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAAS---IL 55
Query: 646 LGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWH 705
+G S + + + L + + + K + + D+ +V
Sbjct: 56 IGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM 115
Query: 706 HQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQSF 755
+ + EL N +V + VK S
Sbjct: 116 RETINVETVREIINEL---------NLNLVAVDSGFAIHVKKPWINKGSG 156
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 40.8 bits (94), Expect = 3e-04
Identities = 24/175 (13%), Positives = 48/175 (27%), Gaps = 17/175 (9%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKN--AVFIVSGRGKDS---LGNWF 640
L++ D D T + + L L + D + + +GR S L
Sbjct: 4 LLLISDLDNTWV--------GDQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQV 55
Query: 641 SGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKET 700
+E G + + ++I + + + S +E
Sbjct: 56 GLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPW 115
Query: 701 AIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQSF 755
I +H Q E+L + + V++ PQ +
Sbjct: 116 KISYHLDPQACPTVIDQLTEMLKETGIPVQV----IFSSGKDVDLLPQRSNKGNA 166
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 755 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.92 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.92 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.86 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.82 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.68 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.66 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.4 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.38 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.34 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.29 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.24 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.24 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.23 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.15 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.07 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.05 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.02 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.99 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.73 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.29 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.87 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 96.75 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 96.72 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.14 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.82 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.6 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 95.35 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 95.24 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 94.38 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 94.25 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 94.13 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 93.42 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 93.17 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 93.11 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 92.49 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 91.91 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 91.87 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 91.73 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 90.54 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 90.48 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 89.58 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 89.08 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 88.44 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 88.34 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 87.08 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 86.76 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 86.09 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 83.96 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 82.55 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 81.41 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.3e-99 Score=850.73 Aligned_cols=453 Identities=29% Similarity=0.521 Sum_probs=415.4
Q ss_pred CcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCCeEEEecCCCccCCcchhhHHHhhhcCeeEEEEeCC
Q 004411 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLP 130 (755)
Q Consensus 51 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 130 (755)
+||||||||+|+..++.. ++|||+++|.+.+. ..+++||||+|...++++ .+......+|+|+||+|+
T Consensus 1 srlivvsnr~~~~~~~~~---------~~gGl~~al~~~~~-~~~g~Wvgw~g~~~~~~~--~~~~~~~~~~~~~~v~l~ 68 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEHAA---------SAGGLAVGILGALK-AAGGLWFGWSGETGNEDQ--PLKKVKKGNITWASFNLS 68 (456)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHHH-HHCEEEEEEEEEESCCSS--CCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCCCCC---------CCccHHHHhHHHHh-hCCCEEEecCCCCCcccc--hhhhhhccCceeEEecCC
Confidence 589999999999875432 46799999987654 479999999987654322 122334578999999999
Q ss_pred hHhHhhHhhccccccccccccccCcCCCCCCcccChhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHh
Q 004411 131 ADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRK 210 (755)
Q Consensus 131 ~~~~~~~y~gf~~~~Lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~ 210 (755)
++++++||+||||++|||+|||+++. .+|++++|++|++||++||++|++.+++ +|+||||||||+++|.+||+
T Consensus 69 ~~~~~~~Y~gf~n~~LWpl~H~~~~~-----~~~~~~~~~~Y~~vN~~fA~~l~~~~~~-~d~iwvhDyhl~llp~~lR~ 142 (456)
T d1uqta_ 69 EQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRK 142 (456)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccccCcccc-----ccccHHHHHHHHHHHHHHHHHHHHhccC-CCeEEEeccchhhhHHHHHH
Confidence 99999999999999999999999876 5799999999999999999999999987 59999999999999999999
Q ss_pred hcCCCeEEEEEecCCCchhhhhcCCChHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEE
Q 004411 211 RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290 (755)
Q Consensus 211 ~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~ 290 (755)
+.|+++||||+|+|||++++|+++|++++|+++++++|+||||+++|++||++||.+++++...... .+.+.|+.++
T Consensus 143 ~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~---~i~~~gr~v~ 219 (456)
T d1uqta_ 143 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK---SHTAWGKAFR 219 (456)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT---EEEETTEEEE
T ss_pred hCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCC---eEEecCceee
Confidence 9999999999999999999999999999999999999999999999999999999999998765433 4778999999
Q ss_pred EEEEeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 004411 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNP 370 (755)
Q Consensus 291 i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 370 (755)
+.++|+|||++.|......+ ..+.+.+++++++++++|++|||+|+.||+..+|+||++||++||+++++++|+|++.|
T Consensus 220 v~~~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~ 298 (456)
T d1uqta_ 220 TEVYPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 298 (456)
T ss_dssp EEECCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred eeeecCcccchhhhhhcccH-HHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCC
Confidence 99999999999998765444 44566788889999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCC
Q 004411 371 ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (755)
Q Consensus 371 ~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 450 (755)
++++.++|.+++.++.++|++||++|+..+|+|++++.+.++++++.++|+.||||++||++||||||++||||||.+
T Consensus 299 ~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p-- 376 (456)
T d1uqta_ 299 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 376 (456)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred cccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred ccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHH
Q 004411 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530 (755)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 530 (755)
.++|+||+|+++|+++++.+|++|||||++++|+||.+||+||++||++|+++++++|.+||+++|
T Consensus 377 --------------~~~g~lIlS~~~G~~~~l~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W 442 (456)
T d1uqta_ 377 --------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHW 442 (456)
T ss_dssp --------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred --------------CCCCcEEEeCCCCCHHHhCCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHH
Confidence 356899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 004411 531 AKSIDQDLERA 541 (755)
Q Consensus 531 ~~~~l~~l~~~ 541 (755)
+++||.+|+++
T Consensus 443 ~~~fl~~l~~~ 453 (456)
T d1uqta_ 443 QECFISDLKQI 453 (456)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhh
Confidence 99999999874
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.92 E-value=9.8e-24 Score=231.63 Aligned_cols=290 Identities=17% Similarity=0.185 Sum_probs=212.8
Q ss_pred CCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCch---hhhhc------CC--ChHHHHHHhhhCCEEEEeCHHHHH
Q 004411 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS---EIYRT------LP--VRDEILKSLLNSDLIGFHTFDYAR 259 (755)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~r~------lp--~~~~il~~ll~~Dligf~t~~~~~ 259 (755)
.|+|++|+++..+++.++++. .++++.+++|..++.. ..+.. .. ...........+|.+...+...+.
T Consensus 121 pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~ 199 (437)
T d2bisa1 121 PDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLI 199 (437)
T ss_dssp CSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHH
T ss_pred CCEEEECChhhhhHhhhhhcc-ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhh
Confidence 399999999988887777665 5789999999887531 11111 11 111233445678998887776554
Q ss_pred HHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHHc--CCceEEEEeccccc
Q 004411 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDL 337 (755)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~ 337 (755)
.... .++.. ..++.++|+|+|++.|.+....+........+++++ .++++|+++||++.
T Consensus 200 ~~~~----~~~~~---------------~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 260 (437)
T d2bisa1 200 DEWG----FFRNF---------------EGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDR 260 (437)
T ss_dssp HTHH----HHGGG---------------TTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCS
T ss_pred hhhh----hhccc---------------cCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccc
Confidence 3322 11111 124678999999999987654444444455667776 46789999999975
Q ss_pred -cCChHHHHHHHHHHHHh--CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChh
Q 004411 338 -FKGISLKFLAMGQLLEQ--HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414 (755)
Q Consensus 338 -~KGi~~~l~A~~~ll~~--~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~ 414 (755)
.||+..+++|++.+..+ +|++ .|+++|.. .+.++ ..++.+.. ..+ .++++.+.++.+
T Consensus 261 ~~Kg~~~ll~a~~~~~~~~~~~~~----~lvi~G~~----~~~~~---~~~~~~~~----~~~-----~~~~~~~~~~~~ 320 (437)
T d2bisa1 261 GQKGVDVLLKAIEILSSKKEFQEM----RFIIIGKG----DPELE---GWARSLEE----KHG-----NVKVITEMLSRE 320 (437)
T ss_dssp SSSCHHHHHHHHHHHTTSGGGGGE----EEEEECCB----CHHHH---HHHHHHHH----TCT-----TEEEECSCCCHH
T ss_pred cchhHHHHHhhhcccccccccccc----eeeeeccc----ccccc---cchhhhcc----ccc-----cceeccccCcHH
Confidence 79999999999988653 3544 48888732 12222 22233321 222 256677889999
Q ss_pred hHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCC
Q 004411 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWN 492 (755)
Q Consensus 415 el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d 492 (755)
++..+|+.||++++||..||++++++|||+||. |+|+|+.+|+.+.+. .|++|+|.|
T Consensus 321 ~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~---------------------Pvi~~~~g~~~e~i~~~~G~~~~~~d 379 (437)
T d2bisa1 321 FVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA---------------------IPIASAVGGLRDIITNETGILVKAGD 379 (437)
T ss_dssp HHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTC---------------------EEEEESCTTHHHHCCTTTCEEECTTC
T ss_pred HHHHHHhhhccccccccccccchHHHHHHHCCC---------------------CEEEeCCCCcHHhEECCcEEEECCCC
Confidence 999999999999999999999999999999975 899999999888774 589999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHHHHHHHHH
Q 004411 493 VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (755)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (755)
++++|++|.++|+++++.++...+..+++++++++.++++++++-.+++
T Consensus 380 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 380 PGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999999999998776667777778888888999999999988765543
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.92 E-value=6.4e-24 Score=238.25 Aligned_cols=319 Identities=14% Similarity=0.142 Sum_probs=212.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCC-CCCEEEEeCCccchHHHHHH-hhcCCCeEEEEEecCCCc----hhhhhcCC--C--
Q 004411 167 GEWQAYLSANKVFADKVMEVINP-DEDYVWIHDYHLMVLPSFLR-KRFHRVKVGFFLHSPFPS----SEIYRTLP--V-- 236 (755)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~~~~-~~DiVwvhDyhl~llp~~lr-~~~~~~~i~~flH~PfP~----~e~~r~lp--~-- 236 (755)
..|..|...++.+++.+.+.... .-|+||+||+|..+.+.+++ .+.+++++++++|..... ...+..+. .
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~ 185 (477)
T d1rzua_ 106 DNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHA 185 (477)
T ss_dssp THHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGG
T ss_pred ccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhh
Confidence 45888888888887665544321 12999999999998888876 455789999999965211 11221111 0
Q ss_pred -----------hHHHHHHhhhCCEEEEeCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccc
Q 004411 237 -----------RDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFES 305 (755)
Q Consensus 237 -----------~~~il~~ll~~Dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~ 305 (755)
...+-.++..+|.+..-+..|++..+.. ..+...... ...+..++.++|+|||.+.|.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~---~~~~~~~~~-------~~~~~~~~~vi~ngv~~~~~~p 255 (477)
T d1rzua_ 186 FGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTA---EFGMGLEGV-------IGSRAHVLHGIVNGIDADVWNP 255 (477)
T ss_dssp SSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH---HHHTTCHHH-------HHTTGGGEEECCCCBCTTTSCT
T ss_pred cccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHH---hcCcchhhh-------hhhccccEEEEECCcchhhccc
Confidence 0123345678999999998888766532 111110000 0112235778999999998865
Q ss_pred cccC-----------chhHHHHHHHHHHc----CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 004411 306 IMSL-----------DVTGQKVKELKEKF----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNP 370 (755)
Q Consensus 306 ~~~~-----------~~~~~~~~~lr~~~----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 370 (755)
.... .......+.++.++ +++++|+++||+++.||+..+++|+++++++++. |+++|.
T Consensus 256 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~------l~~~G~- 328 (477)
T d1rzua_ 256 ATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGR------LVVLGA- 328 (477)
T ss_dssp TTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCE------EEEEEC-
T ss_pred cccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCe------EEEEec-
Confidence 3211 01112223344444 3568999999999999999999999999876432 555663
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCC
Q 004411 371 ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (755)
Q Consensus 371 ~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 450 (755)
|+. ....++.++..+.+. .|.+. +..+.+++..+|+.||+||+||.+||||+|++||||||.
T Consensus 329 ----G~~--~~~~~~~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~--- 390 (477)
T d1rzua_ 329 ----GDV--ALEGALLAAASRHHG--------RVGVA-IGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC--- 390 (477)
T ss_dssp ----BCH--HHHHHHHHHHHHTTT--------TEEEE-ESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC---
T ss_pred ----CCc--hHHHHHHHHHhhcCC--------eEEEE-cccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcCC---
Confidence 222 122344445444332 25554 466888999999999999999999999999999999975
Q ss_pred ccccccCCCCCCCCCCCceEEEeCCCCcccccC------------CcEEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHH
Q 004411 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS------------GAIRVNPWNVDAVADAMDSALQM--ENQEKILRHE 516 (755)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~ai~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~ 516 (755)
|+|+|..+|..+.+. +|++|+|.|++++|++|.++|++ .++.++++.+
T Consensus 391 ------------------PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~ 452 (477)
T d1rzua_ 391 ------------------IPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQK 452 (477)
T ss_dssp ------------------EEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred ------------------CEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHH
Confidence 999999999998872 48999999999999999999873 3333333322
Q ss_pred HHhhHhhhcCHHHHHHHHHHHHHH
Q 004411 517 KHYKYISSHDVAYWAKSIDQDLER 540 (755)
Q Consensus 517 ~~~~~v~~~~~~~W~~~~l~~l~~ 540 (755)
+.. -+.++|..-++++++-.++
T Consensus 453 ~a~--~~~fsw~~~a~~~~~lY~~ 474 (477)
T d1rzua_ 453 LGM--KSDVSWEKSAGLYAALYSQ 474 (477)
T ss_dssp HHH--TCCCBHHHHHHHHHHHHHH
T ss_pred HHH--HhhCCHHHHHHHHHHHHHH
Confidence 221 1247777777777654443
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.86 E-value=2.9e-21 Score=190.62 Aligned_cols=190 Identities=18% Similarity=0.206 Sum_probs=148.6
Q ss_pred cCCcccccccccCchhHHHHHHHHHHc--CCceEEEEecccc-ccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC
Q 004411 297 GIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMD-LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARS 373 (755)
Q Consensus 297 GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~ 373 (755)
|||.+.|.+........+....++++| +++++|++|||++ +.||+..+++|++.|.++.+. .++.|+++|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCB---
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCC--CCeEEEEEeec---
Confidence 899999987655555566777888888 5889999999997 589999999999999754322 13558888731
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccc
Q 004411 374 SGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLD 453 (755)
Q Consensus 374 ~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~ 453 (755)
.+.++. .++.+... ++ .++++.+.++.+++..+|+.||++|+||..||+|++.+|||+||.
T Consensus 76 -~~~~~~---~~~~~~~~----~~-----~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~------ 136 (196)
T d2bfwa1 76 -DPELEG---WARSLEEK----HG-----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA------ 136 (196)
T ss_dssp -CHHHHH---HHHHHHHH----CT-----TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC------
T ss_pred -ccchhh---hhhhhhhc----cc-----eeEEeeeccccccchhccccccccccccccccccccchhhhhcCc------
Confidence 133333 33333322 22 256678899999999999999999999999999999999999975
Q ss_pred cccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhc
Q 004411 454 RALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 454 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (755)
|+|+|..+|..+.+. .|++++|.|+++++++|.++|.+..+.+....+..++++.++
T Consensus 137 ---------------pvI~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~f 195 (196)
T d2bfwa1 137 ---------------IPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 195 (196)
T ss_dssp ---------------EEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred ---------------eeeecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 899999988888774 589999999999999999999988766666555666666544
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=2e-20 Score=198.68 Aligned_cols=201 Identities=14% Similarity=0.173 Sum_probs=154.3
Q ss_pred EEEEEeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEE
Q 004411 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (755)
Q Consensus 290 ~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (755)
++.++|+|||++.+.+... +. ....+|+.+ .++++++++||+.+.||+..+++|++++.+++|+.. ++.
T Consensus 160 ~i~vi~~gv~~~~~~~~~~-~~---~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~i 231 (370)
T d2iw1a1 160 RFQILPPGIYPDRKYSEQI-PN---SREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLF 231 (370)
T ss_dssp GEEECCCCCCGGGSGGGSC-TT---HHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEE
T ss_pred eEEEEEeecccccccccCc-hh---hhhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccce----eee
Confidence 4678999999988765322 21 224455555 478999999999999999999999999988877654 555
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecc
Q 004411 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (755)
Q Consensus 367 i~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 446 (755)
++... .+ +++++++++++.. ..|++++ +.+++..+|+.||++|+||..|||+++++|||+||
T Consensus 232 i~g~~---~~------~~~~~~~~~~~~~------~~v~~~g---~~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G 293 (370)
T d2iw1a1 232 VVGQD---KP------RKFEALAEKLGVR------SNVHFFS---GRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG 293 (370)
T ss_dssp EESSS---CC------HHHHHHHHHHTCG------GGEEEES---CCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT
T ss_pred ccccc---cc------ccccccccccccc------ccccccc---cccccccccccccccccccccccccceeeecccCC
Confidence 55322 11 2344555555433 1366654 35789999999999999999999999999999997
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcE-EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhHh
Q 004411 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAI-RVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI 522 (755)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai-~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 522 (755)
. |+|+|..+|..+.+. .|. +++|.|++++|++|.++|+++ +.++.+.++.++++
T Consensus 294 ~---------------------PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~-~~~~~~~~~ar~~~ 351 (370)
T d2iw1a1 294 L---------------------PVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQS-PLRMAWAENARHYA 351 (370)
T ss_dssp C---------------------CEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH
T ss_pred e---------------------eEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHH
Confidence 5 899999999998883 354 558999999999999999964 45666677889999
Q ss_pred hhcCHHHHHHHHHHHH
Q 004411 523 SSHDVAYWAKSIDQDL 538 (755)
Q Consensus 523 ~~~~~~~W~~~~l~~l 538 (755)
+++++..|.+...+-+
T Consensus 352 ~~~~~~~~~~~~~~ii 367 (370)
T d2iw1a1 352 DTQDLYSLPEKAADII 367 (370)
T ss_dssp HHSCCSCHHHHHHHHH
T ss_pred HHhChhHHHHHHHHHH
Confidence 9999999988665544
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.68 E-value=8.3e-17 Score=160.05 Aligned_cols=159 Identities=21% Similarity=0.293 Sum_probs=124.6
Q ss_pred EEEecCCCcCCCCCC--CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceEEEecCCCce
Q 004411 587 LILLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAW 664 (755)
Q Consensus 587 lI~lD~DGTL~~~~~--~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~i~~~~~~~w 664 (755)
||+||+||||++... ....++++++++|++|++ ++.|+|+|||+...++.++.. ..+++++||+.+..++. .+
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~--~~~v~i~TGR~~~~l~~~~~~--~~~~~~~ng~~~~~~~~-~~ 76 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKE--RFDTYIVTGRSPEEISRFLPL--DINMICYHGACSKINGQ-IV 76 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHH--HSEEEEECSSCHHHHHHHSCS--SCEEEEGGGTEEEETTE-EE
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHhh--CCCEEEEcCCCHHHhhhhcCc--cccEEecCeEEEecCCc-ee
Confidence 899999999998542 456789999999999986 678999999999999988854 45799999999988743 33
Q ss_pred eEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEEecCeEEE
Q 004411 665 EICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVE 744 (755)
Q Consensus 665 ~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~sG~~~VE 744 (755)
..........|.+.+.+.+..+....+|.+.+.+...+.+++...++... .+..+.+++.+.+..+.+.+|..++|
T Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~id 152 (229)
T d1u02a_ 77 YNNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMK----PKLRSRIEEIARIFGVETYYGKMIIE 152 (229)
T ss_dssp ECTTGGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTTH----HHHHHHHHHHHHHHTCEEEECSSEEE
T ss_pred eecchhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhhhH----HHHHHHHHHHhhcCCeEEEeeceEEE
Confidence 32222333455666777777777788999999999999999988755443 34455566666666788999999999
Q ss_pred EEeCCCCCCC
Q 004411 745 VKPQVCQHQS 754 (755)
Q Consensus 745 V~p~gvnKG~ 754 (755)
|.|+|+|||+
T Consensus 153 i~p~g~~Kg~ 162 (229)
T d1u02a_ 153 LRVPGVNKGS 162 (229)
T ss_dssp EECTTCCHHH
T ss_pred EecCCCCHHH
Confidence 9999999984
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.66 E-value=1.1e-16 Score=153.17 Aligned_cols=141 Identities=17% Similarity=0.227 Sum_probs=111.7
Q ss_pred eEEEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEE
Q 004411 327 IVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406 (755)
Q Consensus 327 ~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~ 406 (755)
.++|+|||+++.||+..+++|++++ |+.+ |+++|..+ +++..+.+.+++.+. +. ..|++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~--------~~---~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKI--------AP---DNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHH--------SC---TTEEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEecc--cccchhhhhhhhccc--------cc---CcEEE
Confidence 5588999999999999999999765 5554 67677443 233444444443322 11 13776
Q ss_pred ecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---
Q 004411 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--- 483 (755)
Q Consensus 407 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--- 483 (755)
+ +.++.+++..+|+.||+++.||..||++++++|||+||. |+|+|..+|+.+.+.
T Consensus 72 ~-g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~---------------------pvi~s~~~~~~e~i~~~~ 129 (166)
T d2f9fa1 72 L-GSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK---------------------PVIAVNEGGFKETVINEK 129 (166)
T ss_dssp E-ESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC---------------------CEEEESSHHHHHHCCBTT
T ss_pred e-ecccccccccccccccccccccccccccccccccccccc---------------------cceeecCCcceeeecCCc
Confidence 6 689999999999999999999999999999999999975 899999999998773
Q ss_pred CcEEeCCCCHHHHHHHHHHHhcCCHHHH
Q 004411 484 GAIRVNPWNVDAVADAMDSALQMENQEK 511 (755)
Q Consensus 484 ~ai~VnP~d~~~~A~ai~~aL~m~~~er 511 (755)
+|+.+++ |+++++++|.+++++++..+
T Consensus 130 ~g~~~~~-d~~~~~~~i~~l~~~~~~~~ 156 (166)
T d2f9fa1 130 TGYLVNA-DVNEIIDAMKKVSKNPDKFK 156 (166)
T ss_dssp TEEEECS-CHHHHHHHHHHHHHCTTTTH
T ss_pred ccccCCC-CHHHHHHHHHHHHhCHHHHH
Confidence 4777766 99999999999999876433
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.40 E-value=7.2e-13 Score=135.33 Aligned_cols=161 Identities=14% Similarity=0.187 Sum_probs=104.2
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC-CCceEEcCCceEEEecCCCc
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV-EKLGLSAEHGYFTRWSKNSA 663 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i-~~l~liaenGa~i~~~~~~~ 663 (755)
+|+|++|+||||++. ....++++++++|++|++. +..|+++|||+...+.+++..+ ...++|++||+.+..++...
T Consensus 2 IKli~~DlDGTLl~~--~~~~~~~~~~~~l~~l~~~-gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~ 78 (269)
T d1rlma_ 2 VKVIVTDMDGTFLND--AKTYNQPRFMAQYQELKKR-GIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQL 78 (269)
T ss_dssp CCEEEECCCCCCSCT--TSCCCHHHHHHHHHHHHHH-TCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEE
T ss_pred EEEEEEeCCccCcCC--CCcCChHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEE
Confidence 689999999999973 2344557899999999974 8999999999999999999877 34689999999999864322
Q ss_pred eeEcccCcCccHHHHHHHHHHHHhc---------CCCCcEEeecce--------------EEEEEeccCCCC-------c
Q 004411 664 WEICSLTRDFDWKEIAEPVMKLYTE---------TTDGSFIEDKET--------------AIVWHHQHADPH-------F 713 (755)
Q Consensus 664 w~~~~~~~~~~w~~~v~~i~~~y~~---------~t~gs~iE~k~~--------------~l~~hyr~ad~~-------~ 713 (755)
+.. . .. .+.+..++..+.. ..++.|+..... .....+...+.. .
T Consensus 79 ~~~---~--~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (269)
T d1rlma_ 79 FHG---E--LT-RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNL 152 (269)
T ss_dssp EEC---C--CC-HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEEC
T ss_pred EEe---c--cc-hHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecC
Confidence 221 1 11 2222222322222 122333322110 001111111111 1
Q ss_pred chhhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 714 GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 714 ~~~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
...+..++.+++...+......+.+|..++||.|+++|||.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~ 193 (269)
T d1rlma_ 153 PDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKAN 193 (269)
T ss_dssp CGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHH
T ss_pred CHHHHHHHHHHHHHHhhcceEEEEEcCceEEEecCchHHHH
Confidence 23566778888877766655566789999999999999984
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.38 E-value=8.2e-13 Score=135.21 Aligned_cols=160 Identities=19% Similarity=0.174 Sum_probs=101.8
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC--CCceEEcCCceEEEecCCC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EKLGLSAEHGYFTRWSKNS 662 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i--~~l~liaenGa~i~~~~~~ 662 (755)
.|+|++|+||||++ .++.++++++++|++|++ +..++++|||++..+.+.+... .+.++|++||+.+..+++.
T Consensus 2 ~Kli~~DlDGTL~~---~~~~i~~~~~~al~~l~~--~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~ 76 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLN---DNLEISEKDRRNIEKLSR--KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEG 76 (267)
T ss_dssp BCEEEEECCCCCSC---TTSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTE
T ss_pred eEEEEEeCCccccC---CcCccCHHHHHHHHHHHc--CCEEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEecccc
Confidence 68999999999998 467789999999999985 5689999999999888877643 3457999999999887443
Q ss_pred ceeEcccCcCccHHHHHHHHHHHHhcCC--------CCcEEeecceEEEEEeccC------CCC---------------c
Q 004411 663 AWEICSLTRDFDWKEIAEPVMKLYTETT--------DGSFIEDKETAIVWHHQHA------DPH---------------F 713 (755)
Q Consensus 663 ~w~~~~~~~~~~w~~~v~~i~~~y~~~t--------~gs~iE~k~~~l~~hyr~a------d~~---------------~ 713 (755)
.... ...+. +.+.++++...+.. ++.+.+.....+..+.+.. .+. .
T Consensus 77 ~i~~--~~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 151 (267)
T d1nf2a_ 77 VILN--EKIPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLI 151 (267)
T ss_dssp EEEE--CCBCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEE
T ss_pred cccc--cCCCH---HHHHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHhhhccceEEEEe
Confidence 3221 12332 34444444333211 1111111110000000000 000 0
Q ss_pred -chhhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 714 -GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 714 -~~~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
...+.+++.+.+.+.+.+....+.+|..++||.|+|+|||.
T Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~di~~~~~~K~~ 193 (267)
T d1nf2a_ 152 DTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGK 193 (267)
T ss_dssp CCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHH
T ss_pred ccHHHHHHHHHHHHHhhCCcEEEEEeecceeeecCCCCchhH
Confidence 13455677778887776644445689999999999999984
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.34 E-value=5.4e-13 Score=136.33 Aligned_cols=76 Identities=18% Similarity=0.234 Sum_probs=64.0
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC----CCceEEcCCceEEEec
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV----EKLGLSAEHGYFTRWS 659 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i----~~l~liaenGa~i~~~ 659 (755)
.+|||++|+||||++ .++.+++++.++|++|.+. +..|+++|||++..+.+++..+ +..++|++||+.+...
T Consensus 3 ~iKli~~DlDGTL~~---~~~~i~~~~~~al~~L~~~-gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~ 78 (271)
T d1rkqa_ 3 AIKLIAIDMDGTLLL---PDHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKA 78 (271)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEET
T ss_pred CeeEEEEeCCccccC---CCCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEecc
Confidence 489999999999998 4567889999999999975 8999999999999998887753 4456899999999865
Q ss_pred CCCc
Q 004411 660 KNSA 663 (755)
Q Consensus 660 ~~~~ 663 (755)
.+..
T Consensus 79 ~~~~ 82 (271)
T d1rkqa_ 79 ADGS 82 (271)
T ss_dssp TTCC
T ss_pred CCCe
Confidence 4433
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.29 E-value=1.7e-11 Score=125.82 Aligned_cols=76 Identities=21% Similarity=0.265 Sum_probs=65.2
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecCCCc
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNSA 663 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~~~~ 663 (755)
+|||++|+||||++ .+..++++++++|++|.+. |+.|+++|||++..+.+.+..+. +.++|++||+.+..+.+..
T Consensus 1 iKli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~-Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~ 76 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLN---SKHQVSLENENALRQAQRD-GIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 76 (285)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred CeEEEEECCccccC---CCCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCce
Confidence 58999999999998 4567889999999999974 89999999999999999998762 4579999999999864433
Q ss_pred e
Q 004411 664 W 664 (755)
Q Consensus 664 w 664 (755)
+
T Consensus 77 i 77 (285)
T d1nrwa_ 77 Y 77 (285)
T ss_dssp E
T ss_pred e
Confidence 3
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.24 E-value=1.3e-11 Score=126.06 Aligned_cols=169 Identities=15% Similarity=0.196 Sum_probs=108.0
Q ss_pred HHhhccCceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC-------CCceEEc
Q 004411 578 SAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV-------EKLGLSA 650 (755)
Q Consensus 578 ~~y~~s~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i-------~~l~lia 650 (755)
++++.+.+|+|++|+||||++. .+..++++++++|++|.+ .|..|+|+|||++..+.+.+..+ .....|+
T Consensus 3 ~~~~~~~ikli~~DlDGTLl~~--~~~~i~~~~~~al~~l~~-~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~ 79 (283)
T d2b30a1 3 EALKGADIKLLLIDFDGTLFVD--KDIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVY 79 (283)
T ss_dssp HHTTTCCCCEEEEETBTTTBCC--TTTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEE
T ss_pred ccCcccCccEEEEECCCCCcCC--CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEE
Confidence 5778899999999999999853 356789999999999986 49999999999999988887642 2345788
Q ss_pred CCceEEEecCCCceeEcccCcCccHHHHHHHHHHHHhcC--CCCcEEeecceEEE---------------------EEec
Q 004411 651 EHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTET--TDGSFIEDKETAIV---------------------WHHQ 707 (755)
Q Consensus 651 enGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~~~--t~gs~iE~k~~~l~---------------------~hyr 707 (755)
.||+.++...+..... ...+. ..+.++++..... ....++...+.... ....
T Consensus 80 ~~g~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (283)
T d2b30a1 80 INGTIVYDQIGYTLLD--ETIET---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHN 154 (283)
T ss_dssp GGGTEEECTTCCEEEE--CCCCH---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHH
T ss_pred EeeeEEEcCCCcEeee--cccCH---HHHHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccHH
Confidence 9999998764433221 12232 2333333332211 11222222211110 0000
Q ss_pred cC-C-CC-------cchhhHHHHHHHHHHHhcCCCeEEEecCeEEEEEeCCCCCCC
Q 004411 708 HA-D-PH-------FGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 708 ~a-d-~~-------~~~~qa~el~~~L~~~l~~~~~~V~sG~~~VEV~p~gvnKG~ 754 (755)
+. . .. ....+.+++...+.+.+.+....+.++..++||.|+++|||.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~ 210 (283)
T d2b30a1 155 EMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYT 210 (283)
T ss_dssp HHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHH
T ss_pred HHhhcccceEEEEecCHHHHHHHHHHHHHHhcccceEEEecceeEeecCCcchhHH
Confidence 00 0 00 012456678888888877655556789999999999999973
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.24 E-value=9.2e-12 Score=123.06 Aligned_cols=154 Identities=15% Similarity=0.187 Sum_probs=98.3
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC-CCceEEcCCceEEEecCCC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV-EKLGLSAEHGYFTRWSKNS 662 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i-~~l~liaenGa~i~~~~~~ 662 (755)
|.|+|++|+||||++ .+..++++++++|++|.+ .+..|+++|||+...++..+..+ .+..++++||+.+......
T Consensus 1 kiK~i~~D~DGTL~~---~~~~i~~~~~~~l~~l~~-~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~ 76 (230)
T d1wr8a_ 1 KIKAISIDIDGTITY---PNRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76 (230)
T ss_dssp CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEE
T ss_pred CceEEEEecCCCCcC---CCCccCHHHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccc
Confidence 579999999999998 567788999999999987 48999999999999998887644 2356999999999876432
Q ss_pred ceeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEEecCeE
Q 004411 663 AWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHI 742 (755)
Q Consensus 663 ~w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~sG~~~ 742 (755)
.+. ......| .....+...+......-....+...+.+. .. .......+++.+ .+. ..+....+..+
T Consensus 77 ~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~----~~~-~~~~~~~~~~~ 143 (230)
T d1wr8a_ 77 IFL---ASMDEEW-ILWNEIRKRFPNARTSYTMPDRRAGLVIM-RE---TINVETVREIIN----ELN-LNLVAVDSGFA 143 (230)
T ss_dssp EES---CCCSHHH-HHHHHHHHHCTTCCBCTTGGGCSSCEEEC-TT---TSCHHHHHHHHH----HTT-CSCEEEECSSC
T ss_pred ccc---ccccHHH-HHHHHHHHhcccccceeecccceeeEEEe-cc---cccHHHHHHHHH----Hhc-cceEEeeCCcE
Confidence 221 1222222 22333444443322221122333333332 21 111122233332 322 35667788899
Q ss_pred EEEEeCCCCCCC
Q 004411 743 VEVKPQVCQHQS 754 (755)
Q Consensus 743 VEV~p~gvnKG~ 754 (755)
+||+|++++||.
T Consensus 144 iei~~~~~~K~~ 155 (230)
T d1wr8a_ 144 IHVKKPWINKGS 155 (230)
T ss_dssp EEEECTTCCHHH
T ss_pred EEEeeCCcCcch
Confidence 999999999973
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=5.1e-11 Score=118.15 Aligned_cols=166 Identities=14% Similarity=0.137 Sum_probs=94.5
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC---CCceEEcCCceEEEecC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV---EKLGLSAEHGYFTRWSK 660 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i---~~l~liaenGa~i~~~~ 660 (755)
+.||++||+||||++ .++.++++++++|++|.+ ++.++++|||+...+...+... ....+++.+|+.+...+
T Consensus 2 ~~kl~~fDlDGTLl~---~~~~i~~~~~~al~~l~~--~g~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T d2amya1 2 GPALCLFDVDGTLTA---PRQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDG 76 (243)
T ss_dssp CSEEEEEESBTTTBC---TTSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETT
T ss_pred CCEEEEEcCcCCeeC---CCCcCCHHHHHHHHHHHc--CCCEEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecCC
Confidence 578999999999998 567899999999999985 5578999999999888777653 22455566777776554
Q ss_pred CCceeEcccC-cCcc-HHHHHHHHHHHHhc----CCCCcEEeecceEEEEEeccCCCCcc-----------hhhHHHHHH
Q 004411 661 NSAWEICSLT-RDFD-WKEIAEPVMKLYTE----TTDGSFIEDKETAIVWHHQHADPHFG-----------SCQAKELLD 723 (755)
Q Consensus 661 ~~~w~~~~~~-~~~~-w~~~v~~i~~~y~~----~t~gs~iE~k~~~l~~hyr~ad~~~~-----------~~qa~el~~ 723 (755)
+..+...... .... +..........+.. .......+.......+.......... .....+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (243)
T d2amya1 77 KLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVA 156 (243)
T ss_dssp EEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccceecchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhhcchhhhHHHHH
Confidence 3333321100 0000 01111111111111 11111122222233333222211110 122234555
Q ss_pred HHHHHhcCCCeEE-EecCeEEEEEeCCCCCCC
Q 004411 724 HLENVLANEPVVV-KRGQHIVEVKPQVCQHQS 754 (755)
Q Consensus 724 ~L~~~l~~~~~~V-~sG~~~VEV~p~gvnKG~ 754 (755)
.+.+.+....+.+ .++..++||.|+|+|||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~ 188 (243)
T d2amya1 157 DLRKEFAGKGLTFSIGGQISFDVFPDGWDKRY 188 (243)
T ss_dssp HHHHHTTTSCEEEEEETTTEEEEEETTCSGGG
T ss_pred HHHHHhcccceEEEecCCccceeeccccCHHH
Confidence 6666655545554 588999999999999995
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.15 E-value=1.6e-11 Score=124.94 Aligned_cols=74 Identities=20% Similarity=0.303 Sum_probs=59.6
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc--CC-CCceEEcCCceEEEecCC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS--GV-EKLGLSAEHGYFTRWSKN 661 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~--~i-~~l~liaenGa~i~~~~~ 661 (755)
.|+||+|+||||++. ....++++++++|++|.+. |..|+++|||++..++..+. .. ...++|++||++++.+++
T Consensus 1 ~k~if~DlDGTL~~~--~~~~i~~~~~~al~~l~~~-gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~ 77 (260)
T d2rbka1 1 TKALFFDIDGTLVSF--ETHRIPSSTIEALEAAHAK-GLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEE 77 (260)
T ss_dssp CCEEEECSBTTTBCT--TTSSCCHHHHHHHHHHHHT-TCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTE
T ss_pred CeEEEEECCCCCcCC--CCCCCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCcc
Confidence 389999999999974 3567889999999999974 89999999999887765432 12 234789999999998743
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=2.8e-10 Score=112.34 Aligned_cols=74 Identities=22% Similarity=0.220 Sum_probs=54.2
Q ss_pred eEEE-ecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC-CC----CceEEcCCceEEEec
Q 004411 586 RLIL-LDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG-VE----KLGLSAEHGYFTRWS 659 (755)
Q Consensus 586 rlI~-lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~-i~----~l~liaenGa~i~~~ 659 (755)
|+|+ ||+||||++ .+..++++++++|++|.+ .+ .++++|||........+.. .+ ..++++.||+.+...
T Consensus 1 k~i~lFDlDGTLl~---~~~~is~~~~~~i~~l~~-~g-~~~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 75 (244)
T d2fuea1 1 RVLCLFDVDGTLTP---ARQKIDPEVAAFLQKLRS-RV-QIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKH 75 (244)
T ss_dssp CEEEEEESBTTTBS---TTSCCCHHHHHHHHHHTT-TS-EEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEET
T ss_pred CEEEEEccccCccC---CCCcCCHHHHHHHHHHHh-CC-CEEEEecCChhhhhhhhhhhhccccccceeecccceeeccC
Confidence 5666 499999998 467789999999999986 34 5677788777765555433 21 356889999999876
Q ss_pred CCCce
Q 004411 660 KNSAW 664 (755)
Q Consensus 660 ~~~~w 664 (755)
+...|
T Consensus 76 ~~~~~ 80 (244)
T d2fuea1 76 GRLLS 80 (244)
T ss_dssp TEECC
T ss_pred Cccce
Confidence 43333
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.05 E-value=3.4e-11 Score=120.95 Aligned_cols=160 Identities=14% Similarity=0.068 Sum_probs=90.8
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC---CceEEcCCceEEEecC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE---KLGLSAEHGYFTRWSK 660 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~---~l~liaenGa~i~~~~ 660 (755)
++.||++|+||||++. +..+ +.+..+.++.+ ++..|+++|||++..+.+++..+. .-++|++||+.+..+.
T Consensus 2 ~~~li~~DlDGTL~~~---~~~~--~~~~~~~~~~~-~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~ 75 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGD---QQAL--EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPE 75 (244)
T ss_dssp CSEEEEECTBTTTBSC---HHHH--HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETT
T ss_pred CceEEEEECcccCCCC---CCCH--HHHHHHHHHHc-CCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEcc
Confidence 4678999999999983 2222 33444555554 488899999999999999887432 1358999999998874
Q ss_pred CCceeEcccCcCccH-HHHHHHHHHHHhcCCCCcEEeecceEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEEec
Q 004411 661 NSAWEICSLTRDFDW-KEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRG 739 (755)
Q Consensus 661 ~~~w~~~~~~~~~~w-~~~v~~i~~~y~~~t~gs~iE~k~~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~sG 739 (755)
+..+. ........| ++.+..+++.+.........+.....+.+++.....+ ...+++...+.+.. .....+..+
T Consensus 76 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~ 150 (244)
T d1s2oa1 76 GLDQH-WADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACP---TVIDQLTEMLKETG-IPVQVIFSS 150 (244)
T ss_dssp EECHH-HHHHHHTTCCHHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCT---HHHHHHHHHHHTSS-CCEEEEEET
T ss_pred CcchH-HHHHHHHHHhHHHHHHHHhhcccccccChhhhcceEEEEeccccccH---HHHHHHHHHHHhhc-ccceeeecC
Confidence 32111 000111122 2333333333222112222233344566665543222 22334443443322 222334578
Q ss_pred CeEEEEEeCCCCCCC
Q 004411 740 QHIVEVKPQVCQHQS 754 (755)
Q Consensus 740 ~~~VEV~p~gvnKG~ 754 (755)
.+++||.|+++|||.
T Consensus 151 ~~~~~i~~~~~~K~~ 165 (244)
T d1s2oa1 151 GKDVDLLPQRSNKGN 165 (244)
T ss_dssp TTEEEEEETTCSHHH
T ss_pred CcEEEEEeCccchhH
Confidence 889999999999984
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.02 E-value=1.7e-10 Score=114.46 Aligned_cols=151 Identities=12% Similarity=-0.010 Sum_probs=93.9
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC-CCceEEcCCceEEEecCCC
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV-EKLGLSAEHGYFTRWSKNS 662 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i-~~l~liaenGa~i~~~~~~ 662 (755)
.+|+|++|+||||++ ....+++++.++|++|.+. +..|+++|||+...++.....+ .+..++++||+.+..++..
T Consensus 2 miKli~~D~DGTL~~---~~~~i~~~~~~al~~l~~~-g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~ 77 (225)
T d1l6ra_ 2 MIRLAAIDVDGNLTD---RDRLISTKAIESIRSAEKK-GLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77 (225)
T ss_dssp CCCEEEEEHHHHSBC---TTSCBCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSC
T ss_pred CeEEEEEecCCCCcC---CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCcc
Confidence 468999999999997 4677889999999999974 8999999999998766655433 1356899999998877443
Q ss_pred ceeEcccCcCccHHHHHHHHHHHHhcCCCCcEEeecc-eEEEEEeccCCCCcchhhHHHHHHHHHHHhcCCCeEEEecCe
Q 004411 663 AWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKE-TAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQH 741 (755)
Q Consensus 663 ~w~~~~~~~~~~w~~~v~~i~~~y~~~t~gs~iE~k~-~~l~~hyr~ad~~~~~~qa~el~~~L~~~l~~~~~~V~sG~~ 741 (755)
.+.. . . .+......+.......-..+.... ....+.+. ....+.+++. ..+......+..+..
T Consensus 78 ~~~~-~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~----~~~~~~~~~i~~~~~ 141 (225)
T d1l6ra_ 78 IKKF-F---S---NEGTNKFLEEMSKRTSMRSILTNRWREASTGFD-----IDPEDVDYVR----KEAESRGFVIFYSGY 141 (225)
T ss_dssp EEES-S---C---SHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEB-----CCGGGHHHHH----HHHHTTTEEEEEETT
T ss_pred EEEe-c---C---hHHHHHHHHHHHHhcCcceeecccceeeeeccc-----cCHHHHHHHH----HHHhhcCcEEEECCc
Confidence 3331 1 1 123334444333222111111000 00011111 1112233333 333344678888889
Q ss_pred EEEEEeCCCCCCC
Q 004411 742 IVEVKPQVCQHQS 754 (755)
Q Consensus 742 ~VEV~p~gvnKG~ 754 (755)
.+|+.|+++|||.
T Consensus 142 ~~~i~~~~~~K~~ 154 (225)
T d1l6ra_ 142 SWHLMNRGEDKAF 154 (225)
T ss_dssp EEEEEETTCSHHH
T ss_pred EEEecCCccchHH
Confidence 9999999999974
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.99 E-value=1.1e-10 Score=115.14 Aligned_cols=72 Identities=19% Similarity=0.237 Sum_probs=61.7
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC--CCceEEcCCceEEEecC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EKLGLSAEHGYFTRWSK 660 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i--~~l~liaenGa~i~~~~ 660 (755)
..|||+|+||||++ .+..++++++++|++|.+ .|..++++|||+...+.+.+..+ .+..+|++||+.+....
T Consensus 4 ~~li~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~ 77 (232)
T d1xvia_ 4 PLLVFSDLDGTLLD---SHSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAE 77 (232)
T ss_dssp CEEEEEECTTTTSC---SSCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCT
T ss_pred CEEEEEECCCCccC---CcCcCCHHHHHHHHHHHH-CCCEEEEEeCCChhhchhHHHHhccCCceEEccCCeEEEecC
Confidence 34899999999998 456788899999999997 59999999999999999998765 35679999999998653
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.73 E-value=3.8e-09 Score=104.72 Aligned_cols=71 Identities=21% Similarity=0.266 Sum_probs=60.2
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCC-CceEEcCCceEEEecCC
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKN 661 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~-~l~liaenGa~i~~~~~ 661 (755)
+|+||+|+||||++. . .+++++++|++|.+. |..|+++|||++..+..++..++ ...+|++||+.+..+.+
T Consensus 2 iKli~~DlDGTLl~~---~--~~~~~~~ai~~l~~~-G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~ 73 (243)
T d1wzca1 2 IRLIFLDIDKTLIPG---Y--EPDPAKPIIEELKDM-GFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKG 73 (243)
T ss_dssp EEEEEECCBTTTBSS---S--CSGGGHHHHHHHHHT-TEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTT
T ss_pred cEEEEEeCCCCCCCC---C--CCHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCC
Confidence 699999999999973 2 247789999999974 99999999999999999988663 35799999999988753
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.29 E-value=0.00011 Score=66.30 Aligned_cols=52 Identities=17% Similarity=0.266 Sum_probs=42.5
Q ss_pred hccCceEEEecCCCcCCCCCCC---------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 581 NKTNSRLILLDYDGTVMPQTSE---------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 581 ~~s~~rlI~lD~DGTL~~~~~~---------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
..++.|.|++|+||||+...+. ...|-+.++++|+.|.+ .|..++++|||+-
T Consensus 3 ~~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~-~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 3 TPGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRES 63 (149)
T ss_dssp CTTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSCC
T ss_pred CCCCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHHh-ccCeEEEEecCcH
Confidence 4578899999999999864321 24678999999999997 5999999999983
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.87 E-value=0.00047 Score=60.56 Aligned_cols=53 Identities=23% Similarity=0.318 Sum_probs=41.6
Q ss_pred EEecCCCcCCCCC-CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhH---Hhhhc
Q 004411 588 ILLDYDGTVMPQT-SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSL---GNWFS 641 (755)
Q Consensus 588 I~lD~DGTL~~~~-~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L---~~~f~ 641 (755)
|++|+||||+... +....|-+.+++.|++|.+ .|..+++.|+|+.... .+|+.
T Consensus 3 i~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~~-~G~~IIi~TaR~~~~~~~t~~wL~ 59 (122)
T d2obba1 3 IAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCR 59 (122)
T ss_dssp EEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHH
T ss_pred EEEEcCCCcCCCCCCccccccHHHHHHHHHHHH-CCCeEEEEecCCCcchHHHHHHHH
Confidence 7999999998643 2334677899999999997 4899999999987654 44554
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.75 E-value=0.0001 Score=69.56 Aligned_cols=56 Identities=18% Similarity=0.300 Sum_probs=40.0
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCCCCceEEcCCceE
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i~~l~liaenGa~ 655 (755)
.|||+|||||||++. ++++++...|..++++|||+.-...+++.. ++.++.++|..
T Consensus 2 mkli~fDlDGTLl~e-------------~~~~~a~~~Gi~~~~~tgR~~~~~~~~~~~--~v~ll~~~~~~ 57 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE-------------IWIAFAEKTGIDALKATTRDIPDYDVLMKQ--RLRILDEHGLK 57 (206)
T ss_dssp CEEEEEESBTTTBCC-------------HHHHHHHHHTCGGGGCCTTTCCCHHHHHHH--HHHHHHHTTCC
T ss_pred cEEEEEcCccchHHH-------------HHHHHHHHcCCHHHHHHCCCCCCHHHHHHH--HHHHHHhCCCc
Confidence 489999999999972 345555556899999999998777776653 24444555543
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=96.72 E-value=0.00099 Score=58.50 Aligned_cols=46 Identities=20% Similarity=0.396 Sum_probs=38.7
Q ss_pred eEEEecCCCcCCCCCC---CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC
Q 004411 586 RLILLDYDGTVMPQTS---EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (755)
Q Consensus 586 rlI~lD~DGTL~~~~~---~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~ 632 (755)
|-|++|+||||+.... ....|-+.+++.|++|.+ .|.+++|.|+|+
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~-~G~~Iii~TaR~ 50 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQ-LGFEIVISTARN 50 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHHHH-CCCEEEEEecCC
Confidence 4689999999986432 346788999999999987 499999999996
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.14 E-value=0.0027 Score=58.14 Aligned_cols=51 Identities=22% Similarity=0.158 Sum_probs=38.5
Q ss_pred ceEEEecCCCcCCCCCCC---------------------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhH
Q 004411 585 SRLILLDYDGTVMPQTSE---------------------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSL 636 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~---------------------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L 636 (755)
.|+|+||+||||.+.... .-.+-+.+.++|+.|.+ .|..++|+|+......
T Consensus 5 pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~-~G~~~~v~S~~~~~~~ 76 (164)
T d1u7pa_ 5 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQS-LGVPVAAASRTSEIQG 76 (164)
T ss_dssp CSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHH-TTCCEEEEECCSCHHH
T ss_pred CCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHH-CCCcEEEEeccccchh
Confidence 489999999999863210 01345789999999997 4899999998776543
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.82 E-value=0.0023 Score=62.86 Aligned_cols=51 Identities=14% Similarity=0.229 Sum_probs=38.2
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC---CChhhHHhhh
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG---RGKDSLGNWF 640 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG---R~~~~L~~~f 640 (755)
.+.|++|+||||++. ...+ +.+.++|++|.+. +.+++++|+ |+...+.+.+
T Consensus 2 yk~v~fDlDGTL~~~---~~~i-~~a~~~i~~l~~~-g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 2 YQGYLIDLDGTIYLG---KEPI-PAGKRFVERLQEK-DLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CCEEEECCBTTTEET---TEEC-HHHHHHHHHHHHT-TCCEEEEECCCSSCHHHHHHHH
T ss_pred CCEEEEcCCCccEeC---CCcC-ccHHHHHHHHHHC-CCCEEEEeCCCCCCHHHHHHHH
Confidence 478999999999973 3334 7789999999975 889999875 5555554444
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.60 E-value=0.0033 Score=61.63 Aligned_cols=53 Identities=15% Similarity=0.318 Sum_probs=40.6
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEc---CCChhhHHhhhc
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFS 641 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~f~ 641 (755)
++|+|++|+||||.+. .... +.+.++|++|.+ .+..|+++| +|+.+.+.+.|.
T Consensus 2 ~ik~VifDlDGTL~~~---~~~i-~~a~e~i~~l~~-~g~~~~~~TN~~~~~~~~~~~~l~ 57 (250)
T d2c4na1 2 TIKNVICDIDGVLMHD---NVAV-PGAAEFLHGIMD-KGLPLVLLTNYPSQTGQDLANRFA 57 (250)
T ss_dssp CCCEEEEECBTTTEET---TEEC-TTHHHHHHHHHH-TTCCEEEEESCCSCCHHHHHHHHH
T ss_pred CCCEEEEECCCeeEEC---CCcC-ccHHHHHHHHHH-CCCcEEEEeCCCCCCHHHHHHHHh
Confidence 4799999999999973 3333 467888999986 488888886 777787777664
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=95.35 E-value=0.0044 Score=60.92 Aligned_cols=53 Identities=21% Similarity=0.273 Sum_probs=39.3
Q ss_pred CceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEc---CCChhhHHhhhc
Q 004411 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFS 641 (755)
Q Consensus 584 ~~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~f~ 641 (755)
+.|+|+||+||||.+. .... +.+.++|++|.+ .+..++++| +|+...+.+.+.
T Consensus 6 ~ik~vlFDlDGTL~~~---~~~i-~~a~e~l~~l~~-~g~~~~~~TN~~~~~~~~~~~~~~ 61 (261)
T d1vjra_ 6 KIELFILDMDGTFYLD---DSLL-PGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLR 61 (261)
T ss_dssp GCCEEEECCBTTTEET---TEEC-TTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHH
T ss_pred hCCEEEEeCCCeeEEC---CccC-chHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHH
Confidence 5799999999999873 2223 577889999987 488999987 555666555554
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=95.24 E-value=0.0068 Score=55.50 Aligned_cols=47 Identities=15% Similarity=0.319 Sum_probs=36.5
Q ss_pred ceEEEecCCCcCCCCCCC--------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCC
Q 004411 585 SRLILLDYDGTVMPQTSE--------DKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~--------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~ 632 (755)
+|+||||.||||...... .-.+-+.+.++|++|.+ .+..++|+|..+
T Consensus 2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~-~g~~l~i~TNq~ 56 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQK-AGYKLVMITNQD 56 (161)
T ss_dssp CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHH-TTEEEEEEEECT
T ss_pred CcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHHHH-cCCceeeecccc
Confidence 689999999999875421 12445789999999997 488999999754
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=94.38 E-value=0.0089 Score=56.88 Aligned_cols=37 Identities=8% Similarity=0.096 Sum_probs=31.5
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.+.++|+.|.+. +..++|+||.....++.++..+
T Consensus 76 l~pg~~~~l~~L~~~-g~~~~ivS~~~~~~i~~~l~~l 112 (226)
T d2feaa1 76 IREGFREFVAFINEH-EIPFYVISGGMDFFVYPLLEGI 112 (226)
T ss_dssp BCTTHHHHHHHHHHH-TCCEEEEEEEEHHHHHHHHTTT
T ss_pred hhHHHHHHHHHHHhc-ccccccCCcchhhhHHHHHHHc
Confidence 557888999999864 8899999999999999988764
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=94.25 E-value=3.3 Score=41.89 Aligned_cols=249 Identities=15% Similarity=0.164 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEeCCccchHHHHHHhhcCCCeEEEEEecCCCchhhhhcCCChHHHHHHh--hhCCEEEE
Q 004411 175 ANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL--LNSDLIGF 252 (755)
Q Consensus 175 vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~r~lp~~~~il~~l--l~~Dligf 252 (755)
+-..+++ +.+..+| |+|.||.=-.-.++..+-....++||++. |-=..+.++.. |..++..|.. -.||+.--
T Consensus 76 ~~~~~~~-~l~~~kP--D~vlv~GDr~e~la~a~aa~~~~ipi~Hi-egG~rsg~~~~--~~~de~~R~~iskls~~hf~ 149 (373)
T d1v4va_ 76 ILPQAAR-ALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVGHV-EAGLRSGNLKE--PFPEEANRRLTDVLTDLDFA 149 (373)
T ss_dssp HHHHHHH-HHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEEEE-TCCCCCSCTTS--STTHHHHHHHHHHHCSEEEE
T ss_pred HHHHHhh-hhhhcCc--ccccccccCccchhHHHHHHHhhhhheee-ccccccccccc--Ccchhhhhhhhccccceeee
Confidence 3334444 4455577 89999887777777666666678888852 22122222222 3445555543 23677666
Q ss_pred eCHHHHHHHHHHHhhHhCccccccCceeEEEEcCeEEEEEEEeccCCcccccccccCchhHHHHHHHHHH---c-CCceE
Q 004411 253 HTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEK---F-DGKIV 328 (755)
Q Consensus 253 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~---~-~~~~v 328 (755)
-|..+.++.++ +|.+. .+ +..-| -+++|- +.. ...+.+. . .++.+
T Consensus 150 ~t~~~~~~L~~-----~Ge~~--~~----I~~vG--------~p~~D~--i~~----------~~~~~~~~~~~~~~~~~ 198 (373)
T d1v4va_ 150 PTPLAKANLLK-----EGKRE--EG----ILVTG--------QTGVDA--VLL----------AAKLGRLPEGLPEGPYV 198 (373)
T ss_dssp SSHHHHHHHHT-----TTCCG--GG----EEECC--------CHHHHH--HHH----------HHHHCCCCTTCCSSCEE
T ss_pred cchhhhhhhhh-----hcccc--cc----eeecc--------cchhhH--HHh----------hhhhcccccccccccce
Confidence 67777777664 23221 11 11111 122321 110 1111110 1 35677
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEec
Q 004411 329 ILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIK 408 (755)
Q Consensus 329 il~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~~i~~lv~~In~~~g~~~~~pV~~~~ 408 (755)
++..-|....+.....+.++..+.+..++.. ++... +. . .. .+..+.+. + ... ..+.++
T Consensus 199 lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~----~i~p~-~~--~-~~---~~~~~~~~---~-~~~-----~n~~~~- 257 (373)
T d1v4va_ 199 TVTMHRRENWPLLSDLAQALKRVAEAFPHLT----FVYPV-HL--N-PV---VREAVFPV---L-KGV-----RNFVLL- 257 (373)
T ss_dssp EECCCCGGGGGGHHHHHHHHHHHHHHCTTSE----EEEEC-CS--C-HH---HHHHHHHH---H-TTC-----TTEEEE-
T ss_pred eEEeccccccchHHHHHHHHHHHhhhcccce----eeeee-cc--c-cc---chhhhhhh---h-ccc-----ccceee-
Confidence 7888898888888999999999988887654 43332 21 1 11 11122221 1 111 246765
Q ss_pred CCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCccc-cc-CCcE
Q 004411 409 EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP-SL-SGAI 486 (755)
Q Consensus 409 ~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-~l-~~ai 486 (755)
.+++..+...+++.|++++-.| +-...||.+.+. |+|.=...|-.+ .+ .|..
T Consensus 258 ~~l~~~~~l~ll~~s~~vignS-----ssgi~Ea~~lg~---------------------P~Inir~~~eRqeg~~~g~n 311 (373)
T d1v4va_ 258 DPLEYGSMAALMRASLLLVTDS-----GGLQEEGAALGV---------------------PVVVLRNVTERPEGLKAGIL 311 (373)
T ss_dssp CCCCHHHHHHHHHTEEEEEESC-----HHHHHHHHHTTC---------------------CEEECSSSCSCHHHHHHTSE
T ss_pred ccchHHHHHHHhhhceeEeccc-----chhhhcchhhcC---------------------cEEEeCCCccCHHHHhcCee
Confidence 5899999999999999998776 334558888864 455443434332 33 2444
Q ss_pred EeCCCCHHHHHHHHHHHhcCC
Q 004411 487 RVNPWNVDAVADAMDSALQME 507 (755)
Q Consensus 487 ~VnP~d~~~~A~ai~~aL~m~ 507 (755)
++-+.|.+++..++.++|..+
T Consensus 312 vlv~~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 312 KLAGTDPEGVYRVVKGLLENP 332 (373)
T ss_dssp EECCSCHHHHHHHHHHHHTCH
T ss_pred EEcCCCHHHHHHHHHHHHcCH
Confidence 445559999999999999854
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=94.13 E-value=0.016 Score=53.67 Aligned_cols=48 Identities=21% Similarity=0.279 Sum_probs=37.8
Q ss_pred ceEEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004411 585 SRLILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (755)
+++|+||.||||....+ .+-.+-+.+.++|+.|.+ .+..++|+|..+.
T Consensus 2 ~~Av~~DrDGtl~~~~~y~~~~~~~~~~~gv~e~l~~L~~-~g~~~~ivTNq~~ 54 (182)
T d2gmwa1 2 VPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK-MGFALVVVTNQSG 54 (182)
T ss_dssp BCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTH
T ss_pred CCEEEEeCCCCccCCCCCCCCHHHeeECCCHHHHHHHHhh-cCchhhhhhccch
Confidence 68999999999975332 223456789999999997 4899999999873
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=93.42 E-value=0.021 Score=55.66 Aligned_cols=52 Identities=15% Similarity=0.226 Sum_probs=38.9
Q ss_pred ceEEEecCCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC---CChhhHHhhhc
Q 004411 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG---RGKDSLGNWFS 641 (755)
Q Consensus 585 ~rlI~lD~DGTL~~~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG---R~~~~L~~~f~ 641 (755)
.|.|+||+||||.+. .. +-+...++|++|.+ .+..++++|+ |+.+.+.+.+.
T Consensus 2 yk~vlFDlDGTL~~~---~~-~i~~a~e~l~~l~~-~g~~~~~~TN~s~~~~~~~~~~l~ 56 (253)
T d1wvia_ 2 YKGYLIDLDGTIYKG---KD-RIPAGEDFVKRLQE-RQLPYILVTNNTTRTPEMVQEMLA 56 (253)
T ss_dssp CCEEEEECBTTTEET---TE-ECHHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHH
T ss_pred cCEEEEcCcCceEEC---CC-cCccHHHHHHHHHH-CCCCEEEEeCCCCCCHHHHHHHHH
Confidence 578999999999873 22 34778889999987 4888999875 55566666553
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.17 E-value=0.025 Score=53.28 Aligned_cols=49 Identities=20% Similarity=0.361 Sum_probs=36.5
Q ss_pred ccCceEEEecCCCcCCCCCCCC---------CCCCHHHHHHHHHHhcCCCCcEEEEcCC
Q 004411 582 KTNSRLILLDYDGTVMPQTSED---------KRPSTEVLSILNDLCNDPKNAVFIVSGR 631 (755)
Q Consensus 582 ~s~~rlI~lD~DGTL~~~~~~~---------~~p~~~~~~~L~~L~~d~~~~V~IvSGR 631 (755)
+.+.|+++||+||||....+.. ....+.+.++|+.|.++ +..++|+|--
T Consensus 18 ~~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~-gy~iiIvTNQ 75 (195)
T d1yj5a1 18 KPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQ 75 (195)
T ss_dssp CCCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHH-TCEEEEEEEC
T ss_pred CCcCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHHHhC-CcEEEEecCc
Confidence 4567899999999997533211 11358899999999974 8889999964
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=93.11 E-value=0.027 Score=53.43 Aligned_cols=36 Identities=14% Similarity=0.068 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.++|+.|++.++..++|+||.....+...+...
T Consensus 94 ~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~ 129 (228)
T d2hcfa1 94 EGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLP 129 (228)
T ss_dssp TTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTT
T ss_pred CchHHHHhhhhccccccccccCCCcchhhhhhhhhh
Confidence 467788999987544678899999999988888643
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=92.49 E-value=0.026 Score=53.73 Aligned_cols=48 Identities=19% Similarity=0.270 Sum_probs=37.0
Q ss_pred cCceEEEecCCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCC
Q 004411 583 TNSRLILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGR 631 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~~-----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR 631 (755)
.+.++||||.||||..... .+-.+-+.+.++|++|.+ .|..++|+|-.
T Consensus 21 ~~~~Aif~DrDGtl~~~~~y~~~~~~~~l~pgv~e~L~~L~~-~G~~l~IvTNQ 73 (209)
T d2o2xa1 21 PHLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANR-AGIPVVVVTNQ 73 (209)
T ss_dssp SSCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHH-HTCCEEEEEEC
T ss_pred CCCCEEEEeCCCCeECCCCCCCCHHHeEecccHHHHHHHHHh-hCCeEEEeccc
Confidence 4568999999999965332 123456789999999997 48999999953
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=91.91 E-value=0.027 Score=52.60 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+-+.+.++|++|.+ +..++|+|+.....++..+...
T Consensus 83 ~~~g~~~~L~~l~~--~~~~~ivT~~~~~~~~~~l~~~ 118 (207)
T d2hdoa1 83 LYPGITSLFEQLPS--ELRLGIVTSQRRNELESGMRSY 118 (207)
T ss_dssp ECTTHHHHHHHSCT--TSEEEEECSSCHHHHHHHHTTS
T ss_pred cccchhhhhhhhcc--cccccccccccccccccccccc
Confidence 34678899999974 6889999999999998888754
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=91.87 E-value=0.034 Score=52.16 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
-+.+.+.|+.|++. +..++|+||.+...++..+..
T Consensus 97 ~~~~~~~L~~L~~~-g~~~~i~tn~~~~~~~~~l~~ 131 (224)
T d2hsza1 97 YPNVKETLEALKAQ-GYILAVVTNKPTKHVQPILTA 131 (224)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc-CCcccccccccHHHHHHHHHh
Confidence 36778899999874 889999999999988877754
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.73 E-value=0.044 Score=52.09 Aligned_cols=37 Identities=16% Similarity=0.235 Sum_probs=30.8
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.+.++|+.|.+. |.+++|+||-....++..+..+
T Consensus 83 l~pg~~~~i~~lk~~-G~~~~ivS~~~~~~v~~i~~~l 119 (217)
T d1nnla_ 83 LTPGIRELVSRLQER-NVQVFLISGGFRSIVEHVASKL 119 (217)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHhC-CCEEEEECCCchHHHHHHHHHh
Confidence 457889999999974 8999999999988887777643
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=90.54 E-value=0.063 Score=50.21 Aligned_cols=35 Identities=11% Similarity=-0.124 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
-+.+.++|+.|.+ .+..++|+||.+...+...+..
T Consensus 90 ~pg~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~ 124 (218)
T d1te2a_ 90 LPGVREAVALCKE-QGLLVGLASASPLHMLEKVLTM 124 (218)
T ss_dssp CTTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHH
T ss_pred cchHHHHHHHhhh-cccccccccccccccccccccc
Confidence 3678899999987 4899999999999988877754
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=90.48 E-value=0.14 Score=49.13 Aligned_cols=33 Identities=9% Similarity=0.063 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+.+.++|+.|.+. +..++|+||.+...++..+.
T Consensus 102 ~g~~~~L~~Lk~~-g~~i~i~Tn~~~~~~~~~l~ 134 (257)
T d1swva_ 102 NGVKEVIASLRER-GIKIGSTTGYTREMMDIVAK 134 (257)
T ss_dssp TTHHHHHHHHHHT-TCEEEEBCSSCHHHHHHHHH
T ss_pred CcHHHHHHHHHhc-ccceeecCCCchhhHHHHHH
Confidence 4455678888874 88899999999887776665
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=89.58 E-value=0.14 Score=46.68 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcC
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~ 642 (755)
-+.+.++|++|++. +..++|+|+.+...++ .+..
T Consensus 81 ~~gv~~~l~~l~~~-g~~~~i~Sn~~~~~~~-~l~~ 114 (187)
T d2fi1a1 81 FEGVSDLLEDISNQ-GGRHFLVSHRNDQVLE-ILEK 114 (187)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEECSSCTHHHH-HHHH
T ss_pred cchhHHHHHHHHhh-hccccccccCccchhh-hhhh
Confidence 36788999999974 8999999998766554 4543
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=89.08 E-value=0.26 Score=46.08 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
+.+.+.|++|.+ .+..++|+|+.+.......+...
T Consensus 130 pg~~e~l~~L~~-~g~~l~i~Tn~~~~~~~~~~~~~ 164 (253)
T d1zs9a1 130 ADVVPAVRKWRE-AGMKVYIYSSGSVEAQKLLFGHS 164 (253)
T ss_dssp TTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHTB
T ss_pred CCHHHHHHHHhh-ccCceeecCCCcHHHHHHHHHHc
Confidence 456788899986 48999999999999887777643
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.44 E-value=0.15 Score=47.23 Aligned_cols=39 Identities=15% Similarity=0.253 Sum_probs=27.4
Q ss_pred CCCHHHHHHHHHHhcCCCCcEEEEcCCChh----------hHHhhhcCC
Q 004411 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKD----------SLGNWFSGV 643 (755)
Q Consensus 605 ~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~----------~L~~~f~~i 643 (755)
.|-+..+++|++|.+.....|+|+|.|+.. -|+++|+.+
T Consensus 74 ~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~ 122 (195)
T d1q92a_ 74 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPD 122 (195)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGG
T ss_pred CcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCC
Confidence 355788999999987544568888888633 266666554
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=88.34 E-value=0.078 Score=48.65 Aligned_cols=35 Identities=20% Similarity=0.191 Sum_probs=22.2
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
+.+.+.+.++.+..+ +..++++||...........
T Consensus 76 ~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~ 110 (210)
T d1j97a_ 76 PTEGAEETIKELKNR-GYVVAVVSGGFDIAVNKIKE 110 (210)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHc-CCEEEeecccccccccchhh
Confidence 345566677777753 66777777776666555554
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=87.08 E-value=0.1 Score=49.20 Aligned_cols=64 Identities=19% Similarity=0.271 Sum_probs=50.2
Q ss_pred ccChHHHHHHhhccCceEEEecCCCcCCCCCC-------------------------------CCCCCCHHHHHHHHHHh
Q 004411 570 KLGMHHIASAYNKTNSRLILLDYDGTVMPQTS-------------------------------EDKRPSTEVLSILNDLC 618 (755)
Q Consensus 570 ~l~~~~i~~~y~~s~~rlI~lD~DGTL~~~~~-------------------------------~~~~p~~~~~~~L~~L~ 618 (755)
=.++.+|.+.++..+...|+||+|=|++...+ ..+.|-+.+++.|+.+.
T Consensus 20 w~~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~ 99 (209)
T d2b82a1 20 WVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHV 99 (209)
T ss_dssp EECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHH
T ss_pred eEEHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHH
Confidence 35678888888877777999999999997321 01235568999999999
Q ss_pred cCCCCcEEEEcCCChh
Q 004411 619 NDPKNAVFIVSGRGKD 634 (755)
Q Consensus 619 ~d~~~~V~IvSGR~~~ 634 (755)
+ .|..||.+|||...
T Consensus 100 ~-~Gv~IfyVTnR~~~ 114 (209)
T d2b82a1 100 R-RGDAIFFVTGRSPT 114 (209)
T ss_dssp H-HTCEEEEEECSCCC
T ss_pred H-cCCeEEEEeCCchh
Confidence 7 59999999999864
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=86.76 E-value=0.36 Score=48.44 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=61.1
Q ss_pred ecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCCc--------
Q 004411 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC-------- 478 (755)
Q Consensus 407 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~-------- 478 (755)
+.+.+++.+ ++..||+||..+ |.| +..|+++||. |+|+.-+.+.
T Consensus 274 i~~~~p~~~---ll~~a~~~v~hg---G~~-t~~Eal~~G~---------------------P~v~~P~~~d~~~eQ~~n 325 (391)
T d1pn3a_ 274 VVGEVNLQE---LFGRVAAAIHHD---SAG-TTLLAMRAGI---------------------PQIVVRRVVDNVVEQAYH 325 (391)
T ss_dssp EESSCCHHH---HHTTSSCEEEES---CHH-HHHHHHHHTC---------------------CEEEECSSCCBTTBCCHH
T ss_pred EecccCHHH---HHhhccEEEecC---chH-HHHHHHHhCC---------------------cEEEeccccCCcchHHHH
Confidence 345777654 577899999664 444 5689999975 5666555442
Q ss_pred cccc---CCcEEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHHHHH
Q 004411 479 SPSL---SGAIRVNPWN--VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSI 534 (755)
Q Consensus 479 ~~~l---~~ai~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 534 (755)
++.+ ..|+.+++.+ .++++++|.++|+.+ -+++.+++.+.+++..+..=++.+
T Consensus 326 A~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~---~r~~a~~~a~~~~~~g~~~aa~~i 383 (391)
T d1pn3a_ 326 ADRVAELGVGVAVDGPVPTIDSLSAALDTALAPE---IRARATTVADTIRADGTTVAAQLL 383 (391)
T ss_dssp HHHHHHHTSEEEECCSSCCHHHHHHHHHHHTSTT---HHHHHHHHGGGSCSCHHHHHHHHH
T ss_pred HHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCHH---HHHHHHHHHHHHHhcCHHHHHHHH
Confidence 2233 2478887754 799999999999643 233445555556554334333333
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=86.09 E-value=0.18 Score=46.39 Aligned_cols=60 Identities=18% Similarity=0.223 Sum_probs=41.4
Q ss_pred cCceEEEecCCCcCCCCC----CCC---CCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhcCC
Q 004411 583 TNSRLILLDYDGTVMPQT----SED---KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (755)
Q Consensus 583 s~~rlI~lD~DGTL~~~~----~~~---~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~~i 643 (755)
.+.|+|++|+||+|++.. +.. +.-+..=-..++.|.. .+..++++||+...........+
T Consensus 3 ~~ik~~i~DvDGVlTDG~v~~~~dG~e~k~F~~~Dg~gi~~l~~-~gi~~~iis~~~~~~v~~~~~~l 69 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIADL 69 (177)
T ss_dssp GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHHH
T ss_pred ccCeEEEEccCCcccCCeEEEeCCCCEEEEEECcchHHHHHHhh-hcEEEEEecCCchhHHHHHHhhh
Confidence 468999999999999632 111 1111122235667775 48899999999999988887654
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=83.96 E-value=0.3 Score=44.75 Aligned_cols=33 Identities=12% Similarity=0.082 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHHhhhc
Q 004411 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (755)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~f~ 641 (755)
-+.+.++|+.|.+ .+..++|+|++.... .+.+.
T Consensus 84 ~pgv~~~L~~L~~-~g~~~~v~Sn~~~~~-~~~l~ 116 (204)
T d2go7a1 84 MPGAREVLAWADE-SGIQQFIYTHKGNNA-FTILK 116 (204)
T ss_dssp CTTHHHHHHHHHH-TTCEEEEECSSCTHH-HHHHH
T ss_pred cchHHhhhhcccc-cccchhhhcccchhh-hhhhh
Confidence 4678899999987 489999999987643 33443
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=82.55 E-value=0.98 Score=44.92 Aligned_cols=90 Identities=11% Similarity=0.045 Sum_probs=57.2
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC----cc
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----CS 479 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~ 479 (755)
|+ +.+.+++. ++|..+|++|. .|-.-+..|++++|. |+|+--+.+ .+
T Consensus 287 v~-~~~~~p~~---~~l~~~~~~V~----hgG~~t~~Eal~~Gv---------------------P~v~~P~~~DQ~~na 337 (401)
T d1iira_ 287 CF-AIGEVNHQ---VLFGRVAAVIH----HGGAGTTHVAARAGA---------------------PQILLPQMADQPYYA 337 (401)
T ss_dssp EE-ECSSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHTC---------------------CEEECCCSTTHHHHH
T ss_pred EE-EEeccCHH---HHHhhcCEEEe----cCCchHHHHHHHhCC---------------------CEEEccccccHHHHH
Confidence 55 44567654 56788999883 455566679999976 455533433 22
Q ss_pred ccc---CCcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhc
Q 004411 480 PSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (755)
Q Consensus 480 ~~l---~~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (755)
..+ +.|+.+++. +.+++++||.++|+ + +-++|.+++.+.+++-
T Consensus 338 ~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l~--~-~~~~~a~~~~~~~~~~ 385 (401)
T d1iira_ 338 GRVAELGVGVAHDGPIPTFDSLSAALATALT--P-ETHARATAVAGTIRTD 385 (401)
T ss_dssp HHHHHHTSEEECSSSSCCHHHHHHHHHHHTS--H-HHHHHHHHHHHHSCSC
T ss_pred HHHHHCCCEEEcCcCCCCHHHHHHHHHHHhC--H-HHHHHHHHHHHHHHhc
Confidence 333 347888775 58999999999995 3 2334444555555443
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=81.41 E-value=0.61 Score=46.78 Aligned_cols=96 Identities=11% Similarity=0.019 Sum_probs=62.1
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEEcCCCcCCCccceeeeecccCCCccccccCCCCCCCCCCCceEEEeCCCC----cc
Q 004411 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----CS 479 (755)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~ 479 (755)
|. +.+.+|+.+ ++..+|+||. .|-.-+..|++++|. |+|+.-+.+ .+
T Consensus 288 v~-~~~~~p~~~---ll~~~~~~I~----hgG~~t~~Eal~~Gv---------------------P~l~~P~~~DQ~~na 338 (401)
T d1rrva_ 288 CF-AIDEVNFQA---LFRRVAAVIH----HGSAGTEHVATRAGV---------------------PQLVIPRNTDQPYFA 338 (401)
T ss_dssp EE-EESSCCHHH---HGGGSSEEEE----CCCHHHHHHHHHHTC---------------------CEEECCCSBTHHHHH
T ss_pred EE-EEeccCcHH---HhhhccEEEe----cCCchHHHHHHHhCC---------------------CEEEecccccHHHHH
Confidence 55 445777654 5678999984 444456689999975 555554544 23
Q ss_pred ccc---CCcEEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhhHhhhcCHHHHH
Q 004411 480 PSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531 (755)
Q Consensus 480 ~~l---~~ai~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 531 (755)
..+ +-|+.+++. +.+.++++|.++|+ + +-+++.++..+.++...+..=+
T Consensus 339 ~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl~--~-~~r~~a~~~~~~~~~~g~~~aa 392 (401)
T d1rrva_ 339 GRVAALGIGVAHDGPTPTFESLSAALTTVLA--P-ETRARAEAVAGMVLTDGAAAAA 392 (401)
T ss_dssp HHHHHHTSEEECSSSCCCHHHHHHHHHHHTS--H-HHHHHHHHHTTTCCCCHHHHHH
T ss_pred HHHHHCCCEEEcCcCCCCHHHHHHHHHHHhC--H-HHHHHHHHHHHHHhhcCHHHHH
Confidence 333 247888885 48999999999995 3 3445555666666554444433
|