Citrus Sinensis ID: 004475

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-

MPFFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTSDGKCGA

cccccccEEEEccccccccccEEECccccccccccCEEcccccEEEEEEEEccccccccccEEEEEEEcccccCEEcccccccccccccccEEEEccccEEEEEEccccccccccccccccccEEEcccccccccccccccccccHHHcccccccccEEEEEccccccEEccccccEEEEECcccccEEEEEEcccccccccccccccccEEEEcccccEEEEccccccccccccccccccccccccCEccccccEEEEEEEccccccccccccccCEEECccccccccccEEEEEcccCEEEEEcccccEEEEEEEEccccEEEEEECccccccccEEEEEccccccccccccccEEEcccccEEEEEEEcccccEEEEEEccccccccccccEEEEEEcccccEEEEEEcccccccEEEEEEEcccccccccccccEEEEEEEccccccEEEEEEcccccCEEcccccccccccccccEEEEEEEcccccEEEEEEEccccccccccccCEEEEEEccccccccccccccccccccccccccccHHHHHHccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccHHHHHHcccccccccccccEEEEEccccccccccHHHHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHHHHHcccccccccccc

*PFFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTI*************************NIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS*********

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Probable glutamyl endopeptidase, chloroplastic	Serine-type protease active in vitro against the LHCII N-terminal. Cleaves its substrate on the carboxy-side of Glu residues.	probable	Q10MJ1
Probable glutamyl endopeptidase, chloroplastic	Serine-type protease active in vitro against the LHCII N-terminal. Cleaves its substrate on the carboxy-side of Glu residues.	probable	Q8VZF3

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1XFD, chain A
Confidence level:very confident
Coverage over the Query: 5-106,157-373,390-741
View the alignment between query and template
View the model in PyMOL

Template: 3O4H, chain A
Confidence level:very confident
Coverage over the Query: 32-111,155-196,209-229,245-373,394-526,540-742
View the alignment between query and template
View the model in PyMOL

Template: 1K32, chain A
Confidence level:very confident
Coverage over the Query: 5-197,208-261,275-372,394-414,426-468
View the alignment between query and template
View the model in PyMOL

Template: 3C5M, chain A
Confidence level:confident
Coverage over the Query: 33-107,157-228,242-373,389-463
View the alignment between query and template
View the model in PyMOL