Citrus Sinensis ID: 004574

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740----

MPFFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTSDGKCGA

cccccccEEEEccccccccccEEECccccccccccCEEcccccEEEEEEEEccccccccccEEEEEEEcccccCEEccccccccccccccccEEECcccEEEEEEccccccccccccccccccEEEcccccccccccccccccccHHHHcccccccEEEEEEccccccEECcccccEEEEECcccccEEEEEEEccccCEECcccccccEEEEEcccccEEEECcccccccccccccccccccccccEEccccccEEEEEEEccccccccccccccCEEccccccccccccCEEEcccccccCEEEcccccEEEEEEEcccccEEEEEECccccccccEEEEEccccccccccccccEEEcccccEEEEEEEcccccEEEEEEccccccccccccEEEEEEcccccEEEEEEcccccccEEEEEEEcccccEEccccccEEEEEEEccccccEEEEEEcccccCEEcccccccccccccccEEEEEEEcccccEEEEEEEccccccccccccCEEEEEEcccccccccccccccccccccccccccccEEEEcccEEEEcccccccccccccccHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccHHHHHHcccccccccccccEEEEEccccccccccHHHHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHHHHHcccccccccccc

*PFFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIP****************KIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS*********

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Probable glutamyl endopeptidase, chloroplastic	Serine-type protease active in vitro against the LHCII N-terminal. Cleaves its substrate on the carboxy-side of Glu residues.	probable	Q10MJ1
Probable glutamyl endopeptidase, chloroplastic	Serine-type protease active in vitro against the LHCII N-terminal. Cleaves its substrate on the carboxy-side of Glu residues.	probable	Q8VZF3

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2ECF, chain A
Confidence level:confident
Coverage over the Query: 464-733
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Template: 4A5S, chain A
Confidence level:confident
Coverage over the Query: 28-556,570-732
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Template: 1XFD, chain A
Confidence level:probable
Coverage over the Query: 32-152,176-190,213-254,266-732
View the alignment between query and template
View the model in PyMOL

Template: 2GOP, chain A
Confidence level:probable
Coverage over the Query: 37-224
View the alignment between query and template
View the model in PyMOL

Template: 2OJH, chain A
Confidence level:probable
Coverage over the Query: 8-82
View the alignment between query and template
View the model in PyMOL