Citrus Sinensis ID: 004584

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740----
MTSRFGSQSSGVTTMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFVKKGSKNEQVDAVLLANQLRKRFINQVMTAGQRVVFEYHGNNYIFTVNGAAVEGQEKSNALERGIITNETYFVFEASNDSGIKIVNQREGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDDFLHALYEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPLSIIILDDIERLLEYVPIGPRFSNIISQTMLVLLKRLPPKGKKLLVIGTTSEVSFLDSVGICDAFSVTYHVPTLKTDDAKKVLKQLNVFAEEDVDSASEALNDMPIKKLYMLIEMAAQGEQGGAAEAIYSGREKIKISHFYDCLQDMVRY
cccccccccccccEEEEEcccccccccccEEEEcHHHHHHcccccccEEEEEEEccEEEEEECcccccccccEEEcHHHHHccccccccEEEEEECcccccccEEEEEccHHHHHcccccccccHHHHHHHHHHHHcccccccccEEEEECcccEEEEEEEEEEEcccccccccccEEEccccEEEEEEccccccEEEccccccccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHcccccEEEcccccccccccHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHccccccccEEEEEEccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccEEcHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHHHHHHcccccccccEEEEEEccccccccccccccccccEEEcccccHHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHcccccccHHHHHcccccccHHHHHHHHHHHccc
**************MNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFVKKGSKNEQVDAVLLANQLRKRFINQVMTAGQRVVFEYHGNNYIFTVNGAAVEGQEKSNALERGIITNETYFVFEASNDSGIKI*N*REGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKS*******TGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQL**********EESIKVTMDDFLHALYEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPLSIIILDDIERLLEYVPIGPRFSNIISQTMLVLLKRLPPKGKKLLVIGTTSEVSFLDSVGICDAFSVTYHVPTLKTDDAKKVLKQLNVFAEEDVDSASEALNDMPIKKLYMLIEMAAQGEQGGAAEAIYSGREKIKISHFYDCLQDMVRY
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MTSRFGSQSSGVTTMNVINTPSADLALTNLAYCSPADLLNFRVPNSNLFLASVAGDSFVLSLASHPSVNKGQIALNSVQRRHAKVSTGDHVSLNRFIPPEDFNLALLTVELEFVKKGSKNEQVDAVLLANQLRKRFINQVMTAGQRVVFEYHGNNYIFTVNGAAVEGQEKSNALERGIITNETYFVFEASNDSGIKIVNQREGANSNIFRHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGMEPKIVNGPEVLSKFVGETEKNIRDLFADAENDQRTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVAKSAVSFALNRQLSMDDLTKPVDEESIKVTMDDFLHALYEIVPAFGASTDDLERSRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPLVTCLLEGPSGSGKTALAATAGIDSDFPFVKIISAESMIGLHESTKCAQIVKVFEDAYKSPLSIIILDDIERLLEYVPIGPRFSNIISQTMLVLLKRLPPKGKKLLVIGTTSEVSFLDSVGICDAFSVTYHVPTLKTDDAKKVLKQLNVFAEEDVDSASEALNDMPIKKLYMLIEMAAQGEQGGAAEAIYSGREKIKISHFYDCLQDMVRY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Vesicle-fusing ATPase Involved in vesicle-mediated transport. The ATPase activity of NSF serves to disassemble the SNARE complex, freeing the components for subsequent pairing and fusion events.confidentQ9M0Y8
Vesicular-fusion protein sec18 Required for vesicle-mediated transport. Catalyzes the fusion of transport vesicles within the Golgi cisternae. Is also required for transport from the endoplasmic reticulum to the Golgi stack. Seem to function as a fusion protein required for the delivery of cargo proteins to all compartments of the Golgi stack independent of vesicle origin.probableQ9P7Q4
Vesicular-fusion protein SEC18 Required for vesicle-mediated transport. Catalyzes the fusion of transport vesicles within the Golgi cisternae. Is also required for transport from the endoplasmic reticulum to the Golgi stack. Seem to function as a fusion protein required for the delivery of cargo proteins to all compartments of the Golgi stack independent of vesicle origin.probableP18759

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.6.-.-Acting on acid anhydrides.probable
3.6.4.-Acting on acid anhydrides; involved in cellular and subcellular movement.probable
3.6.4.6Vesicle-fusing ATPase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1D2N, chain A
Confidence level:very confident
Coverage over the Query: 495-720
View the alignment between query and template
View the model in PyMOL
Template: 3HU3, chain A
Confidence level:very confident
Coverage over the Query: 67-488
View the alignment between query and template
View the model in PyMOL
Template: 1QCS, chain A
Confidence level:confident
Coverage over the Query: 11-203
View the alignment between query and template
View the model in PyMOL