Citrus Sinensis ID: 004637
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 740 | 2.2.26 [Sep-21-2011] | |||||||
| Q9M9S4 | 728 | Probable LRR receptor-lik | yes | no | 0.920 | 0.935 | 0.559 | 0.0 | |
| C0LGJ9 | 742 | Probable LRR receptor-lik | no | no | 0.924 | 0.921 | 0.539 | 0.0 | |
| Q8LFN2 | 802 | Probable inactive leucine | no | no | 0.905 | 0.835 | 0.406 | 1e-152 | |
| Q9LYN8 | 1192 | Leucine-rich repeat recep | no | no | 0.760 | 0.472 | 0.277 | 4e-49 | |
| Q9T020 | 878 | Probable receptor-like pr | no | no | 0.377 | 0.317 | 0.358 | 1e-43 | |
| Q9SJT0 | 871 | Probable receptor-like pr | no | no | 0.395 | 0.336 | 0.348 | 2e-43 | |
| Q9FN37 | 1036 | Phytosulfokine receptor 2 | no | no | 0.771 | 0.551 | 0.256 | 4e-43 | |
| C0LGQ5 | 1249 | LRR receptor-like serine/ | no | no | 0.754 | 0.446 | 0.268 | 4e-43 | |
| Q9FLJ8 | 842 | Probable receptor-like pr | no | no | 0.416 | 0.365 | 0.334 | 9e-43 | |
| Q9FN92 | 829 | Probable receptor-like pr | no | no | 0.474 | 0.423 | 0.316 | 1e-42 |
| >sp|Q9M9S4|Y1143_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/731 (55%), Positives = 513/731 (70%), Gaps = 50/731 (6%)
Query: 24 VSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVI 83
VS QL SE+R L ++QK L+YP L+ W++WTNFCYLPSS S KI+C N VTELTV
Sbjct: 24 VSESQLISSESRTLLEIQKHLQYPPTLRSWSNWTNFCYLPSSPSFKILCFNGHVTELTVT 83
Query: 84 GNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSK 143
GN++ L F+ D FT+LTKLSNLK LSLVSLG+ GPLPS+
Sbjct: 84 GNRTV-----------------KLPGRFSSDSLFTVLTKLSNLKTLSLVSLGISGPLPSQ 126
Query: 144 INRFWSLEVLNISSN-FIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNL 202
I R S S+ FI G IP EI+SLKNL+S+VLA+NL NGSVPDL+ L L+ELNL
Sbjct: 127 IIRLSSSLQSLNLSSNFISGNIPKEISSLKNLRSLVLANNLFNGSVPDLRGLSNLQELNL 186
Query: 203 GGNDFGPKF-PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261
GGN GP+ PSL+ N++++ L+NNS S+IP +K ++L+ D+SSN F G I FL
Sbjct: 187 GGNKLGPEVVPSLASNLITISLKNNSFGSKIPEQIKKLNKLQSLDLSSNKFTGSIPRFLL 246
Query: 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTW 321
SLPS+ L+LA N LS +LP + C++KL +++S NLL GKLPSC S ++ T+
Sbjct: 247 SLPSLQNLSLAQNLLSGSLPNSSLCNSKLRILDVSRNLLTGKLPSCFSSKK-QTVLLFTF 305
Query: 322 NCLS---GVNTKYQHPYSFCRKEA----LAVKPPVNVKSDDEQSTRVDVGLILGIIGGVV 374
NCLS + KYQ P +FC EA AVK K E+ T +++GL++GII GV+
Sbjct: 306 NCLSINGSPSAKYQRPVTFCENEAKQAVAAVKSDTKDKERKEEDTGIELGLVIGIIIGVI 365
Query: 375 GFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSV------RGSPKPAIDSRRVPQTM 428
V LVLV +R+S++ ++ E + D+++V + K D RRVPQTM
Sbjct: 366 LVSAVLAGLVLVRMRKSRSK---EEPLEANNVDQVTVCSNTTRSTTSKTVPDLRRVPQTM 422
Query: 429 RSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR 488
RSA IGL P+R FSLEE+EEATNNFD NL GE QLYKG L +G V+V+C+KLKQ+
Sbjct: 423 RSAVIGLSPYRVFSLEELEEATNNFDAENLCGE----QLYKGCLREGIAVTVRCIKLKQK 478
Query: 489 HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH-PNTGSTVFLVLEHISNGSLRDYLT 547
+ Q+L Q +E+LSKLRH HLVS+LGHCI TYQDH P GST+F+V E+ISNGSLRDYLT
Sbjct: 479 NSTQNLAQQMEVLSKLRHMHLVSVLGHCIGTYQDHHPYAGSTIFIVQEYISNGSLRDYLT 538
Query: 548 DWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
DW+KK++LKWPQRM+I IG RG+QFLHTGVAPGIFGNNL+ EN+LLD+ LT KLSGY+I
Sbjct: 539 DWRKKEVLKWPQRMSIAIGVARGIQFLHTGVAPGIFGNNLEIENVLLDETLTVKLSGYSI 598
Query: 608 PLPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQV-KSTSEVDGLKLQLE 666
PLPSK G ESP SN+ DG KEDVYQ GVIL+Q+ITGK + ++SE+ LKLQLE
Sbjct: 599 PLPSKVGAESP------SNE--DGEKEDVYQFGVILIQIITGKVIAAASSELGSLKLQLE 650
Query: 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726
L + PS LR+ ADP VRGTYAY+SLRTTVE INCL +D KRPSIEDV+WNLQY+IQ
Sbjct: 651 NSLRDEPSVLRSLADPCVRGTYAYESLRTTVEFAINCLCEDQRKRPSIEDVVWNLQYTIQ 710
Query: 727 VQEGWTSSGNL 737
VQ+GWTSS NL
Sbjct: 711 VQQGWTSSENL 721
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|C0LGJ9|Y2278_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidopsis thaliana GN=At2g02780 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/736 (53%), Positives = 512/736 (69%), Gaps = 52/736 (7%)
Query: 25 SIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIG 84
S Q+ SE++ L ++QK L+YP+VLQ WTD TNFC++ S SL+I+C + VTELTV G
Sbjct: 25 SESQVASSESQTLLEIQKQLQYPQVLQSWTDTTNFCHIRPSPSLRIICLHGHVTELTVTG 84
Query: 85 NKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKI 144
N++S LS +F+ + FT+LT+LS+LK LSL SLG+ G L KI
Sbjct: 85 NRTS-----------------KLSGSFH--KLFTLLTQLSSLKTLSLTSLGISGSLSPKI 125
Query: 145 --NRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELN 201
SLE LN+SSNFI G+IP EI SLKNLKS+VL DN+ G V D L+ L L+EL+
Sbjct: 126 ITKLSPSLESLNLSSNFISGKIPEEIVSLKNLKSLVLRDNMFWGFVSDDLRGLSNLQELD 185
Query: 202 LGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261
LGGN GP+ PSL + +V L+NNS RS+IP +K + L+ D+SSN F G I FLF
Sbjct: 186 LGGNKLGPEVPSLPSKLTTVSLKNNSFRSKIPEQIKKLNNLQSLDLSSNEFTGSIPEFLF 245
Query: 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL-NRTVVST 320
S+PS+ L+L N LS +LP + S+K+ +++SHNLL GKLPSC S S N+TV+ +
Sbjct: 246 SIPSLQILSLDQNLLSGSLPNSSCTSSKIITLDVSHNLLTGKLPSCYSSKSFSNQTVLFS 305
Query: 321 WNCLSGV---NTKYQHPYSFCRKEA---LAVKP-PVNVKSDDEQSTRVDVGLILGIIGGV 373
+NCLS + N KYQ P SFC+ +A +AV+P P K+ D+ S R+ +GL++ II GV
Sbjct: 306 FNCLSLIGTPNAKYQRPLSFCQNQASKAIAVEPIP---KAKDKDSARIKLGLVILIIIGV 362
Query: 374 VGFVVVFGLLVLVVIRRSKTTGAGD------DKYERSVADKMSV----RGSPKPAIDSRR 423
+ + LLVL+ ++R ++ D ER +DK+SV S K DSRR
Sbjct: 363 IILAAILVLLVLIALKRRRSRSEDDPFEVNNSNNERHASDKVSVCSTTTASSKSLPDSRR 422
Query: 424 VPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCL 483
VPQTMRSA IGLPP+R FSLEE+EEATN+FD +L E QLY+G L +G V+V+ +
Sbjct: 423 VPQTMRSAVIGLPPYRVFSLEELEEATNDFDAASLFCE----QLYRGCLREGIPVTVRVI 478
Query: 484 KLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH-PNTGSTVFLVLEHISNGSL 542
KLKQ+ LPQSL Q +E+LSKLRH HLVS+LGH I + QDH + G T+F+V E+IS+GSL
Sbjct: 479 KLKQKSLPQSLAQQMEVLSKLRHMHLVSVLGHSIASNQDHNQHAGHTIFIVQEYISSGSL 538
Query: 543 RDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
RD+LT+ +KK++LKWPQRMAI IG RG+QFLH GVAPGIFGNNLK ENI+LD+ LT K+
Sbjct: 539 RDFLTNCRKKEVLKWPQRMAIAIGVARGIQFLHMGVAPGIFGNNLKIENIMLDETLTVKI 598
Query: 603 SGYNIPLPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKS-TSEVDGL 661
SGY IPLPSK G E P + SN+ D KEDVYQ GVILLQ+ITGK V + +SE+ L
Sbjct: 599 SGYTIPLPSKVGEERPQAKKPRSNE--DREKEDVYQFGVILLQIITGKVVAAGSSEMGSL 656
Query: 662 KLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721
KLQLE L + PS L + ADPSV+G+YAY+SLRTTVE INCL +D +KRPSIEDV+WNL
Sbjct: 657 KLQLENGLRDEPSVLSSLADPSVKGSYAYESLRTTVEFAINCLCEDQSKRPSIEDVVWNL 716
Query: 722 QYSIQVQEGWT-SSGN 736
QY+IQVQ+GW SSGN
Sbjct: 717 QYTIQVQQGWRPSSGN 732
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8LFN2|Y3037_ARATH Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 OS=Arabidopsis thaliana GN=At3g03770 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 539 bits (1389), Expect = e-152, Method: Compositional matrix adjust.
Identities = 304/748 (40%), Positives = 438/748 (58%), Gaps = 78/748 (10%)
Query: 46 YPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQ 105
YP+VL W ++T+FC S SL +VC VT+L +IG+ +
Sbjct: 43 YPKVLNSWNNYTDFCNSEPSPSLTVVCYEDSVTQLHIIGDNGT----------------H 86
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP 165
L +F+I+ F T L KL ++KVL+ VSLGLWG LP KINR SLE+LN+SSNF++G IP
Sbjct: 87 MLPKSFSINSFVTTLVKLPDVKVLTFVSLGLWGWLPQKINRLSSLEILNVSSNFLFGPIP 146
Query: 166 MEITSLKNLKSIVL---------------------------------------------- 179
E++SL L++++L
Sbjct: 147 HELSSLATLQTLILDENMFSGELPDWIDSLPSLAVLSLRKNVLNGSLPSSLSSLSGLRVL 206
Query: 180 --ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSG-L 236
A+N NG++PDL L L+ L+L GN FGP FP LS +V++IL N RS + + +
Sbjct: 207 ALANNRFNGALPDLSHLTNLQVLDLEGNSFGPLFPRLSNKLVTLILSKNKFRSAVSAEEV 266
Query: 237 KNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS 296
+ QL+ D+S N FVGP + L SLP+I YLN++ N+L+ L N+SC+++L FV++S
Sbjct: 267 SSLYQLQHLDLSYNTFVGPFPTSLMSLPAITYLNISHNKLTGRLSANLSCNSQLMFVDMS 326
Query: 297 HNLLIGKLPSCIG-SNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKPPVNVKSDD 355
NLL G LP+C+ S+ +R VV NCL+ N Q P SFC EALAV ++
Sbjct: 327 SNLLTGSLPTCLKPSSGTSRDVVYASNCLATTNED-QRPVSFCSNEALAVGILPQRRNKV 385
Query: 356 EQSTRVDVGLILGIIGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSP 415
+ VG+ LG+ ++G +++ + VV+RR R + + S+ +
Sbjct: 386 SK-----VGIALGVTASILGVLLLA-GALFVVLRRLNAKKTVTKSSPRLIRENASMGYTS 439
Query: 416 KPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDG 475
K D+R + QTM+ +GLP +R FSLEE+E ATNNF+ + +GEGSQGQ+Y+G L DG
Sbjct: 440 KLLSDARYISQTMKLGGLGLPAYRTFSLEELEYATNNFESSAFMGEGSQGQIYRGRLKDG 499
Query: 476 SRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLE 535
S V+++CLK+K+ Q+LM H+EL++KLRHRHLVS+LGHC Y D +T S +F V E
Sbjct: 500 SFVAIRCLKMKKSCSTQNLMHHIELIAKLRHRHLVSVLGHCFECYLDD-STVSRMFFVFE 558
Query: 536 HISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
++ NG LR +++D +L W QR+++ IG +G+QFLHTG+ PG++ NNLK +ILLD
Sbjct: 559 YVPNGELRTWISDGHMGRLLTWEQRISVAIGVAKGIQFLHTGIVPGVYDNNLKMTDILLD 618
Query: 596 KALTAKLSGYNIPL----PSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQ 651
L AKLS YN+PL K G G + D K D+Y GVILL++I G+
Sbjct: 619 NNLAAKLSSYNLPLLVEGLGKVGQVGSRSGPKGTPSIKDEDKIDIYDFGVILLELIVGRP 678
Query: 652 VKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKR 711
+++ S+VD LK QL+ ++ R+ DP+V + SL+T +EI + CL KD +R
Sbjct: 679 LRAKSQVDVLKEQLQASISADDGARRSMVDPTVHRACSDQSLKTMMEICVRCLLKDPLER 738
Query: 712 PSIEDVLWNLQYSIQVQEGWTSSGNLST 739
PSIEDVLWNLQ++ QVQEGW + N S+
Sbjct: 739 PSIEDVLWNLQFASQVQEGWLQNSNPSS 766
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LYN8|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1 | Back alignment and function description |
|---|
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 173/623 (27%), Positives = 285/623 (45%), Gaps = 60/623 (9%)
Query: 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP-DLQRL 194
L GP+P ++ L +++S+N + GEIP ++ L NL + L+ N L GS+P ++
Sbjct: 592 LSGPIPEELGECLVLVEISLSNNHLSGEIPASLSRLTNLTILDLSGNALTGSIPKEMGNS 651
Query: 195 VLLEELNLGGNDFGPKFPS---LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNN 251
+ L+ LNL N P L ++V + L N L +P+ L N +L D+S NN
Sbjct: 652 LKLQGLNLANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLKELTHMDLSFNN 711
Query: 252 FVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCI--- 308
G + S L ++ ++ L + N+ + +P + +L ++++S NLL G++P+ I
Sbjct: 712 LSGELSSELSTMEKLVGLYIEQNKFTGEIPSELGNLTQLEYLDVSENLLSGEIPTKICGL 771
Query: 309 --------GSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTR 360
N+L V S C C + V ++ +S
Sbjct: 772 PNLEFLNLAKNNLRGEVPSDGVCQDPSKALLSGNKELCGR---VVGSDCKIEGTKLRSAW 828
Query: 361 VDVGLILGIIGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAID 420
GL+LG ++ FV VF L + +R K D ER ++ K +D
Sbjct: 829 GIAGLMLGFT--IIVFVFVFSLRRWAMTKRVKQR----DDPERMEESRL------KGFVD 876
Query: 421 SR---------RVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF 471
R P ++ A P + L +I EAT++F N+IG+G G +YK
Sbjct: 877 QNLYFLSGSRSREPLSINIAMFEQPLLK-VRLGDIVEATDHFSKKNIIGDGGFGTVYKAC 935
Query: 472 LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531
L V+VK L + + M +E L K++H +LVS+LG+C + +
Sbjct: 936 LPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEK--------L 987
Query: 532 LVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTE 590
LV E++ NGSL +L + ++L W +R+ I +GA RG+ FLH G P I ++K
Sbjct: 988 LVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKAS 1047
Query: 591 NILLDKALTAKLSGYNIPL---PSKKGLESPLRGQ--YVSNQPGDGA----KEDVYQLGV 641
NILLD K++ + + + + + + G Y+ + G A K DVY GV
Sbjct: 1048 NILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGV 1107
Query: 642 ILLQVITGKQVKSTS--EVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEI 699
ILL+++TGK+ E +G L K DP + +S ++I
Sbjct: 1108 ILLELVTGKEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQI 1167
Query: 700 TINCLSKDAAKRPSIEDVLWNLQ 722
+ CL++ AKRP++ DVL L+
Sbjct: 1168 AMLCLAETPAKRPNMLDVLKALK 1190
|
Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9T020|Y4391_ARATH Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 165/310 (53%), Gaps = 31/310 (10%)
Query: 439 RGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHV 498
R FSL E++EAT NF+ + +IG G G +Y G L DG++V+VK + +
Sbjct: 512 RYFSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQGITEFQTEI 571
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
++LSKLRHRHLVS++G+C + S + LV E +SNG RD+L K L W
Sbjct: 572 QMLSKLRHRHLVSLIGYC--------DENSEMILVYEFMSNGPFRDHLYG-KNLAPLTWK 622
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS----------GYNIP 608
QR+ I IG+ RG+ +LHTG A GI ++K+ NILLD+AL AK++ G N
Sbjct: 623 QRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHV 682
Query: 609 LPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETC 668
+ KG L +Y Q K DVY GV+LL+ + + ++ + +
Sbjct: 683 STAVKGSFGYLDPEYFRRQQLTD-KSDVYSFGVVLLEALCARPA-----INPQLPREQVN 736
Query: 669 LAEAPSKLRAEA------DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
LAE + + + DP + GT +S++ E CL RP++ DVLWNL+
Sbjct: 737 LAEWAMQWKRKGLLEKIIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNLE 796
Query: 723 YSIQVQEGWT 732
Y++Q+QE +T
Sbjct: 797 YALQLQEAFT 806
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q9SJT0|Y2214_ARATH Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 169/316 (53%), Gaps = 23/316 (7%)
Query: 428 MRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ 487
+ ++A+GL R FSL E++E T NFD + +IG G G +Y G + DG++V++K +
Sbjct: 502 LYNSALGLG--RYFSLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQS 559
Query: 488 RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLT 547
+++LSKLRHRHLVS++G+C + + + LV E++SNG RD+L
Sbjct: 560 EQGITEFHTEIQMLSKLRHRHLVSLIGYC--------DENAEMILVYEYMSNGPFRDHLY 611
Query: 548 DWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS---- 603
K L W QR+ I IGA RG+ +LHTG A GI ++K+ NILLD+AL AK++
Sbjct: 612 G-KNLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGL 670
Query: 604 ------GYNIPLPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGK-QVKSTS 656
G N + KG L +Y Q K DVY GV+LL+ + + +
Sbjct: 671 SKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTD-KSDVYSFGVVLLEALCARPAINPQL 729
Query: 657 EVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIED 716
+ + L L + L DP + G +S++ E CL+ RP++ D
Sbjct: 730 PREQVNLAEWAMLWKQKGLLEKIIDPHLVGAVNPESMKKFAEAAEKCLADYGVDRPTMGD 789
Query: 717 VLWNLQYSIQVQEGWT 732
VLWNL+Y++Q+QE ++
Sbjct: 790 VLWNLEYALQLQEAFS 805
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q9FN37|PSKR2_ARATH Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 168/655 (25%), Positives = 290/655 (44%), Gaps = 84/655 (12%)
Query: 107 LSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPM 166
LS NF + +T NL +L+L + GL G +PS + LEVL++S N YG IP
Sbjct: 409 LSKNFIGEEIPNNVTGFDNLAILALGNCGLRGQIPSWLLNCKKLEVLDLSWNHFYGTIPH 468
Query: 167 EITSLKNLKSIVLADNLLNGSVP----DLQRLVLLE----------------ELNLGGND 206
I +++L I ++N L G++P +L+ L+ L + N N
Sbjct: 469 WIGKMESLFYIDFSNNTLTGAIPVAITELKNLIRLNGTASQMTDSSGIPLYVKRNKSSN- 527
Query: 207 FGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSI 266
G + +S+ S+ L NN L I + +L D+S NNF G I + L ++
Sbjct: 528 -GLPYNQVSRFPPSIYLNNNRLNGTILPEIGRLKELHMLDLSRNNFTGTIPDSISGLDNL 586
Query: 267 LYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326
L+L+ N L ++P++ L+ +++N L G +PS S
Sbjct: 587 EVLDLSYNHLYGSIPLSFQSLTFLSRFSVAYNRLTGAIPS-------------GGQFYSF 633
Query: 327 VNTKYQHPYSFCRKEALAVKPPVNVKSDDE-----QSTRVDVG-------LILGIIGGVV 374
++ ++ CR A+ P +V + S R + G +++ I +
Sbjct: 634 PHSSFEGNLGLCR----AIDSPCDVLMSNMLNPKGSSRRNNNGGKFGRSSIVVLTISLAI 689
Query: 375 GFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIG 434
G ++ +++L + R+ DD+ D+ ++ G K S+ V S
Sbjct: 690 GITLLLSVILLRISRKDV-----DDRIND--VDEETISGVSKALGPSKIV--LFHSCGC- 739
Query: 435 LPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSL 494
+ S+EE+ ++TNNF N+IG G G +YK DGS+ +VK L + +
Sbjct: 740 ----KDLSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGDCGQMEREF 795
Query: 495 MQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
VE LS+ H++LVS+ G+C G+ L+ + NGSL +L + +M
Sbjct: 796 QAEVEALSRAEHKNLVSLQGYC--------KHGNDRLLIYSFMENGSLDYWLHERVDGNM 847
Query: 555 -LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP---LP 610
L W R+ I GA RG+ +LH P + ++K+ NILLD+ A L+ + + P
Sbjct: 848 TLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRP 907
Query: 611 SKKGLESPLRGQ--YVSNQPGDG----AKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQ 664
+ + L G Y+ + + DVY GV+LL+++TG++ + +
Sbjct: 908 YDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRDL 967
Query: 665 LETCLAEAPSKLRAE-ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ K AE D ++R ++ +EI C+ + +RP IE+V+
Sbjct: 968 VSRVFQMKAEKREAELIDTTIRENVNERTVLEMLEIACKCIDHEPRRRPLIEEVV 1022
|
Phytosulfokine receptor with a serine/threonine-protein kinase activity. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 177/659 (26%), Positives = 288/659 (43%), Gaps = 101/659 (15%)
Query: 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLL 184
NL L L L G +P + + L +L++SSN + G IP+++ K L I L +N L
Sbjct: 600 NLDRLRLGKNQLTGKIPWTLGKIRELSLLDMSSNALTGTIPLQLVLCKKLTHIDLNNNFL 659
Query: 185 NGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI---LRNNSLRSEIPSGLKNFD 240
+G +P L +L L EL L N F P+ N ++ L NSL IP + N
Sbjct: 660 SGPIPPWLGKLSQLGELKLSSNQFVESLPTELFNCTKLLVLSLDGNSLNGSIPQEIGNLG 719
Query: 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS--------------- 285
L ++ N F G + + L + L L+ N L+ +PV I
Sbjct: 720 ALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRNSLTGEIPVEIGQLQDLQSALDLSYNN 779
Query: 286 ----------CSAKLNFVEISHNLLIGKLPSCIGS-NSLNRTVVSTWNCLSGVNTKYQHP 334
+KL +++SHN L G++P +G SL VS +N L G K
Sbjct: 780 FTGDIPSTIGTLSKLETLDLSHNQLTGEVPGSVGDMKSLGYLNVS-FNNLGGKLKKQFSR 838
Query: 335 Y---SFCRKEALAVKPPVN---VKSDDEQSTRVDVGLILGIIGGVVGFVVVFGLLVLVVI 388
+ SF L P V+S+++Q ++ II + + GL++LV+
Sbjct: 839 WPADSFLGNTGLCGSPLSRCNRVRSNNKQQGLSARSVV--IISAISALTAI-GLMILVIA 895
Query: 389 ----RRS---KTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGF 441
+R K G G Y + S + + KP + +R
Sbjct: 896 LFFKQRHDFFKKVGHGSTAY---TSSSSSSQATHKPLFRNGASKSDIR------------ 940
Query: 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLP-QSLMQHVEL 500
E+I EAT+N +IG G G++YK L +G V+VK + K + +S + V+
Sbjct: 941 -WEDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMSNKSFSREVKT 999
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD-----WKKKDML 555
L ++RHRHLV ++G+C + L+ E++ NGS+ D+L + KKK +L
Sbjct: 1000 LGRIRHRHLVKLMGYC------SSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLL 1053
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY---------- 605
W R+ I +G +GV++LH P I ++K+ N+LLD + A L +
Sbjct: 1054 DWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENC 1113
Query: 606 ------NIPLPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKST---S 656
N G +P +Y + K DVY +G++L++++TGK + +
Sbjct: 1114 DTNTDSNTWFACSYGYIAP---EYAYSLKAT-EKSDVYSMGIVLMEIVTGKMPTDSVFGA 1169
Query: 657 EVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAY--DSLRTTVEITINCLSKDAAKRPS 713
E+D ++ +ET L A S DP ++ + D+ +EI + C +RPS
Sbjct: 1170 EMDMVRW-VETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCTKTSPQERPS 1227
|
Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FLJ8|Y5613_ARATH Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 176/347 (50%), Gaps = 39/347 (11%)
Query: 404 SVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGS 463
S + +MS+ GS K S + +G R F E++ AT NFD + G G
Sbjct: 482 STSRRMSIFGSKKSK--SNGFSSFFSNQGLG----RYFPFTELQTATQNFDENAVCGVGG 535
Query: 464 QGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523
G++Y G + G++V++K +++LSKLRHRHLVS++G C
Sbjct: 536 FGKVYIGEIDGGTQVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFC------- 588
Query: 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKD-----MLKWPQRMAIIIGATRGVQFLHTGV 578
+ + LV E++SNG LRD+L K+ D L W QR+ I IG+ RG+ +LHTG
Sbjct: 589 -DENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGA 647
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNIP--LPSKKG-LESPLRGQYVSNQPGD----- 630
A GI ++KT NILLD+ L AK+S + + P +G + + ++G + P
Sbjct: 648 AQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVSTAVKGSFGYLDPEYFRRQQ 707
Query: 631 -GAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA------DPS 683
K DVY GV+L +V+ + V ++ + + LAE L + DP
Sbjct: 708 LTDKSDVYSFGVVLFEVLCARPV-----INPQLPREQVNLAEYAMNLHRKGMLEKIIDPK 762
Query: 684 VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQEG 730
+ GT + SLR VE CL++ RP + DVLWNL+Y++Q+QE
Sbjct: 763 IVGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLEYALQLQEA 809
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q9FN92|Y5597_ARATH Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 196/395 (49%), Gaps = 44/395 (11%)
Query: 353 SDDEQSTRVDVGLILGI-IGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSV 411
S +T+ +VG+I+G+ IG ++ VV+ G VL R G D+ D S
Sbjct: 394 SGSSSTTKKNVGMIIGLTIGSLLALVVLGGFFVLYKKR-------GRDQ------DGNSK 440
Query: 412 RGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF 471
P + + A+I L ++EATN+FD IG G G++YKG
Sbjct: 441 TWIPLSSNGTTSSSNGTTLASIASNSSYRIPLVAVKEATNSFDENRAIGVGGFGKVYKGE 500
Query: 472 LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531
L DG++V+VK K + +E+LS+ RHRHLVS++G+C + + +
Sbjct: 501 LHDGTKVAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYC--------DENNEMI 552
Query: 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTEN 591
LV E++ NG+L+ +L L W QR+ I IG+ RG+ +LHTG A + ++K+ N
Sbjct: 553 LVYEYMENGTLKSHLYG-SGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSAN 611
Query: 592 ILLDKALTAKLSGYNI----PLPSKKGLESPLRGQYVSNQPGD------GAKEDVYQLGV 641
ILLD+ L AK++ + + P + + + ++G + P K DVY GV
Sbjct: 612 ILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGV 671
Query: 642 ILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA------DPSVRGTYAYDSLRT 695
++ +V+ + V +D + LAE K + + DPS+RG DSLR
Sbjct: 672 VMFEVLCARPV-----IDPTLTREMVNLAEWAMKWQKKGQLEHIIDPSLRGKIRPDSLRK 726
Query: 696 TVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQEG 730
E CL+ RPS+ DVLWNL+Y++Q+QE
Sbjct: 727 FGETGEKCLADYGVDRPSMGDVLWNLEYALQLQEA 761
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 740 | ||||||
| 224138008 | 745 | predicted protein [Populus trichocarpa] | 0.966 | 0.959 | 0.679 | 0.0 | |
| 255558192 | 749 | Serine/threonine-protein kinase PBS1, pu | 0.956 | 0.945 | 0.659 | 0.0 | |
| 296086415 | 720 | unnamed protein product [Vitis vinifera] | 0.962 | 0.988 | 0.636 | 0.0 | |
| 359473374 | 746 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.981 | 0.973 | 0.629 | 0.0 | |
| 449434813 | 728 | PREDICTED: probable LRR receptor-like se | 0.975 | 0.991 | 0.598 | 0.0 | |
| 356497862 | 734 | PREDICTED: probable LRR receptor-like se | 0.959 | 0.967 | 0.574 | 0.0 | |
| 356501912 | 708 | PREDICTED: probable LRR receptor-like se | 0.906 | 0.947 | 0.555 | 0.0 | |
| 297844344 | 733 | hypothetical protein ARALYDRAFT_471612 [ | 0.920 | 0.929 | 0.560 | 0.0 | |
| 75191439 | 728 | RecName: Full=Probable LRR receptor-like | 0.920 | 0.935 | 0.559 | 0.0 | |
| 15223744 | 747 | putative leucine-rich repeat transmembra | 0.920 | 0.911 | 0.545 | 0.0 |
| >gi|224138008|ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|222833817|gb|EEE72294.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1001 bits (2587), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/740 (67%), Positives = 590/740 (79%), Gaps = 25/740 (3%)
Query: 11 FKLFLVIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKI 70
F + ++ V +S GQL PSETRILFQVQ+LLEYP+VLQGW +WTNFCYLP S SLK+
Sbjct: 10 FAALFTLIVMQVSISRGQLAPSETRILFQVQQLLEYPQVLQGWNNWTNFCYLPPSPSLKV 69
Query: 71 VCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLS 130
VC+NS VTELTV+GNKSS + S S Q +LS NF+ID FFT LT LSNLKVLS
Sbjct: 70 VCSNSHVTELTVVGNKSSSSAS------PSSPKQNTLSDNFSIDAFFTTLTNLSNLKVLS 123
Query: 131 LVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD 190
LVSLGLWGPLP+KINRFWSL+ LNIS NFI+G+IP +I SLKNL S+VLA NLLNG+VPD
Sbjct: 124 LVSLGLWGPLPTKINRFWSLQALNISYNFIHGQIPQDILSLKNLTSLVLAHNLLNGTVPD 183
Query: 191 LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSN 250
L+ LVLL+ELNLGGN GP FPSL N+V++IL+NNSLRS IPS +K F+QL+Q DISSN
Sbjct: 184 LRSLVLLQELNLGGNHLGPTFPSLGNNLVTIILKNNSLRSVIPSEIKKFNQLQQLDISSN 243
Query: 251 NFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
+GPI LFSLPS+ YL+LA NQLS ALP NISCS KL FV+ISHN+LIGKLPSCI S
Sbjct: 244 KLIGPIPPALFSLPSLQYLDLAQNQLSGALPTNISCSVKLQFVDISHNILIGKLPSCIAS 303
Query: 311 NSLNRTVVSTWNCLS-GVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTRVDVGLILGI 369
N+ RTV+S+WNCLS G N YQHPYSFC KEALAVKPP KS + +S+ + +G++LGI
Sbjct: 304 NTSTRTVISSWNCLSGGKNASYQHPYSFCNKEALAVKPP--AKSKEHKSSTIKLGIVLGI 361
Query: 370 IGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKY---------ERSVADKMSVRGSPKPAID 420
+GGV+G V GLL+ V+IRRSKT A D Y +RSVA K SVR A+D
Sbjct: 362 VGGVLGIAGVLGLLIFVIIRRSKTVAADDHVYSIFDGSVTSKRSVASKKSVRR----AVD 417
Query: 421 SRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSV 480
SRRVPQTMRSAAIGLPP+R F+LEE+E+ATNNFDP N IGEGSQGQLYKG L DGS V V
Sbjct: 418 SRRVPQTMRSAAIGLPPYRVFTLEEMEDATNNFDPLNFIGEGSQGQLYKGCLIDGSVVLV 477
Query: 481 KCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNG 540
KC+KLKQ++LPQS++Q +E+LSKLRH HLVSILGH I+TYQDH +T TVF+VLEH+SNG
Sbjct: 478 KCVKLKQKNLPQSMIQQIEVLSKLRHLHLVSILGHTIVTYQDHSSTAGTVFVVLEHVSNG 537
Query: 541 SLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTA 600
SLRDYL D +K++ML+WPQRMAIIIG RG+QFLHTGVAPGIFGNN+K EN+LLD LTA
Sbjct: 538 SLRDYLADERKREMLRWPQRMAIIIGVARGIQFLHTGVAPGIFGNNVKIENVLLDDTLTA 597
Query: 601 KLSGYNIPLPSKKGLESPLRGQ--YVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEV 658
KLS Y IPLPSK G ESPL GQ + N + KEDVYQLGVILLQVITGK V S +
Sbjct: 598 KLSDYKIPLPSKVGSESPLNGQDAFNINSSENAEKEDVYQLGVILLQVITGKLVTSNRAL 657
Query: 659 DGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
D L++Q+E LAEAPSKL+A DPS RGT+AY+SL+T E+ INCL+K++ RPSIEDVL
Sbjct: 658 DELRIQVEKGLAEAPSKLQALVDPSTRGTFAYESLKTAAEMAINCLNKESRTRPSIEDVL 717
Query: 719 WNLQYSIQVQEGWTS-SGNL 737
WNLQYSIQ+QEGWTS SGNL
Sbjct: 718 WNLQYSIQIQEGWTSTSGNL 737
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255558192|ref|XP_002520123.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis] gi|223540615|gb|EEF42178.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/737 (65%), Positives = 582/737 (78%), Gaps = 29/737 (3%)
Query: 22 VPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELT 81
PVS+GQL+PSETRILFQVQKLLEYP+VLQ WT+WTNFC+LP S SLKIVC+N VTELT
Sbjct: 21 APVSVGQLSPSETRILFQVQKLLEYPQVLQRWTNWTNFCWLPPSPSLKIVCSNGHVTELT 80
Query: 82 VIGNKSSPAHSPKP-TFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPL 140
VIGN++SP+ PKP F S+Q+LS +F+ID FFT+LTKLSNLKVLSLVSLGLWGP
Sbjct: 81 VIGNRTSPSQIPKPINSNNFQVSRQTLSKSFSIDAFFTVLTKLSNLKVLSLVSLGLWGPF 140
Query: 141 PSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEEL 200
P+KINR WSLEVLN+SSNFIYG IP ++ SLKNL S+VL+DNLL G VPDL+ L LL+EL
Sbjct: 141 PAKINRLWSLEVLNVSSNFIYGAIPQQVVSLKNLSSLVLSDNLLKGPVPDLKSLALLQEL 200
Query: 201 NLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFL 260
+LGGN+ GP FPS+SK++V+VIL NNSLRS IPS +KNF+QL+Q DISSN +GP+ S L
Sbjct: 201 DLGGNNLGPNFPSISKSVVTVILGNNSLRSIIPSEIKNFNQLQQLDISSNKLIGPVPSSL 260
Query: 261 FSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVST 320
FSLPSI +L+LA NQLS ALP NISC+ KL FV+IS NLLIGKLPSCI SNS NRTV+S+
Sbjct: 261 FSLPSIQFLDLAQNQLSGALPSNISCNFKLKFVDISKNLLIGKLPSCIASNSSNRTVISS 320
Query: 321 WNCLS-GVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTRVDVGLILGIIGGVVGFVVV 379
WNCLS G N+ QHP SFC KEALAVKPPV +E + + +GLIL IIGGVVG
Sbjct: 321 WNCLSSGANSSSQHPLSFCHKEALAVKPPVET---EEHKSTIQIGLILAIIGGVVGIAGA 377
Query: 380 FGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPK-----------------PAIDSR 422
LL+L++IRRSK G+ +E S+ DK+SV S A S
Sbjct: 378 L-LLILIIIRRSKRRANGE-TFEGSMIDKISVVSSSVPTVDSSTLIKWKLCEFMQACASD 435
Query: 423 RVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKC 482
RS+A+ +EEIE+ATNNFDP N +GEGSQGQLYKG+L DG+ V VKC
Sbjct: 436 NEVSCNRSSAVP-----RVHVEEIEDATNNFDPLNFMGEGSQGQLYKGWLRDGAVVLVKC 490
Query: 483 LKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSL 542
+KLKQ++LPQSL+QH+E+LSKLRH HLVS+LGHCI+TYQDHP T +TVF+VLEH+SNGSL
Sbjct: 491 VKLKQKNLPQSLVQHMEVLSKLRHLHLVSVLGHCIVTYQDHPRTATTVFVVLEHVSNGSL 550
Query: 543 RDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
DYLTD +KKD+LKWPQRM+I +G RG+QFLHTGVAPGIFGNN+K EN+LLD++LTAKL
Sbjct: 551 SDYLTDRRKKDILKWPQRMSITVGVARGIQFLHTGVAPGIFGNNIKIENVLLDESLTAKL 610
Query: 603 SGYNIPLPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLK 662
S Y IP+PSK G ESPL GQ N + KEDVYQLGVILLQ+ITGK V S +E++ LK
Sbjct: 611 SNYTIPMPSKVGSESPLNGQDTYNSSVNAEKEDVYQLGVILLQMITGKLVTSPNELEELK 670
Query: 663 LQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
+Q+E LAEAP+KLRA DPS RGT+AY+SLRT V+IT+NCLSK+++ RPSIEDVLWNLQ
Sbjct: 671 IQVEKGLAEAPTKLRAIVDPSTRGTFAYESLRTAVKITMNCLSKESSNRPSIEDVLWNLQ 730
Query: 723 YSIQVQEGWTSSGNLST 739
YS+QVQEGW SSGNL+T
Sbjct: 731 YSMQVQEGWASSGNLAT 747
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086415|emb|CBI32004.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/743 (63%), Positives = 575/743 (77%), Gaps = 31/743 (4%)
Query: 1 MEKFRVVSLCFKLFLVIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFC 60
ME F V CF ++IF PVS+GQLTP+E RIL QVQ+LLEYPE LQGW +WT+FC
Sbjct: 1 MESFWVF-FCFLFSVIIF----PVSMGQLTPTEGRILLQVQQLLEYPEALQGWNNWTSFC 55
Query: 61 YLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTIL 120
YLP S SLKIVCT++RVTELT+IGNKSSP+ F+ID FFT+L
Sbjct: 56 YLPHSPSLKIVCTDNRVTELTIIGNKSSPS-------------------KFSIDAFFTVL 96
Query: 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180
TKLS+++VLSLVSLG+WG LP K+NRF +LEVLNISSNFIYGE+P I++ +L+SIVLA
Sbjct: 97 TKLSHVQVLSLVSLGMWGHLPPKVNRFQALEVLNISSNFIYGELPRTISTFISLRSIVLA 156
Query: 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFD 240
DNLLNGSVPDL+ L+LLEELNLG N FGP+FPSL ++VSV+L+NNSLRS IP GL NFD
Sbjct: 157 DNLLNGSVPDLRSLLLLEELNLGDNRFGPEFPSLGASLVSVVLKNNSLRSVIPLGLMNFD 216
Query: 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
+L+QFDISSN FVGPI S +F LPSI YLNLA NQ + A NISCS L FV+ISHN L
Sbjct: 217 RLQQFDISSNKFVGPIPSSIFYLPSIQYLNLAKNQFTGAFQTNISCSGNLRFVDISHNHL 276
Query: 301 IGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTR 360
IGKLPSC+ SNS N TV+S+WNCLSG N YQ P S CRKEALAVKPP +D Q +
Sbjct: 277 IGKLPSCVRSNSSNLTVISSWNCLSGGNLGYQLPNSVCRKEALAVKPPTR---NDAQKSS 333
Query: 361 VDVGLILGIIGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKYER-SVADKMSVRGSPKPAI 419
+GLILG++ G+VG +VV GLL L + R+S+ + D + + SVA K + S KP
Sbjct: 334 SKLGLILGVVAGIVGVLVVLGLLTLAIFRKSRPNKSETDIFNQGSVAYKSPLHSSSKPIS 393
Query: 420 DSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVS 479
++R VP TM +GLPP+ F+LEE+E+ATNNFDP+NLI EGSQGQ YKG+L DGS V
Sbjct: 394 EARHVPTTMGFGTLGLPPYHVFTLEEMEDATNNFDPSNLIAEGSQGQSYKGWLRDGSEVL 453
Query: 480 VKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISN 539
VKCLKLK +H PQSL Q +E ++KLRH+HLVS+LGHCI+TYQ+HPNT STVFLV+EH++N
Sbjct: 454 VKCLKLKHKHSPQSLPQQMEAVTKLRHQHLVSVLGHCIVTYQEHPNTASTVFLVVEHVAN 513
Query: 540 GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599
GSLRD+LTD +++++LKWPQR+ I IG RG+QFLHTG APGIFGNNLK EN+LL++ LT
Sbjct: 514 GSLRDHLTDRRRREILKWPQRLGISIGIARGIQFLHTGNAPGIFGNNLKIENVLLNEKLT 573
Query: 600 AKLSGYNIPLPSKKGLESPLRG-QYVSNQPG--DGAKEDVYQLGVILLQVITGKQVKSTS 656
K+S YNIPL K G ESPL G ++ S+ G + ++D+YQLGVILL++ITGKQV S S
Sbjct: 574 TKISNYNIPLRFKVGSESPLNGPKFRSDLQGAQEAERDDIYQLGVILLEIITGKQVTSES 633
Query: 657 EVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIED 716
E+D LKLQLE L EA SKLRA DPS+RGT+AY+SL TV+IT+NCLSKD+ KRPSI D
Sbjct: 634 ELDELKLQLERGLTEAASKLRALTDPSIRGTFAYESLTNTVQITLNCLSKDSRKRPSIAD 693
Query: 717 VLWNLQYSIQVQEGWTSSGNLST 739
VLWNLQYS+QVQEGW SS LST
Sbjct: 694 VLWNLQYSVQVQEGWASSEGLST 716
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359473374|ref|XP_002271161.2| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g14390 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/755 (62%), Positives = 576/755 (76%), Gaps = 29/755 (3%)
Query: 1 MEKFRVVSLCFKLFLVIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFC 60
ME F V CF ++IF PVS+GQLTP+E RIL QVQ+LLEYPE LQGW +WT+FC
Sbjct: 1 MESFWVF-FCFLFSVIIF----PVSMGQLTPTEGRILLQVQQLLEYPEALQGWNNWTSFC 55
Query: 61 YLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTIL 120
YLP S SLKIVCT++RVTELT+IGNKSSP+ S G SQQ+LS F+ID FFT+L
Sbjct: 56 YLPHSPSLKIVCTDNRVTELTIIGNKSSPSVS-----GDLKVSQQTLSEKFSIDAFFTVL 110
Query: 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180
TKLS+++VLSLVSLG+WG LP K+NRF +LEVLNISSNFIYGE+P I++ +L+SIVLA
Sbjct: 111 TKLSHVQVLSLVSLGMWGHLPPKVNRFQALEVLNISSNFIYGELPRTISTFISLRSIVLA 170
Query: 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFD 240
DNLLNGSVPDL+ L+LLEELNLG N FGP+FPSL ++VSV+L+NNSLRS IP GL NFD
Sbjct: 171 DNLLNGSVPDLRSLLLLEELNLGDNRFGPEFPSLGASLVSVVLKNNSLRSVIPLGLMNFD 230
Query: 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
+L+QFDISSN FVGPI S +F LPSI YLNLA NQ + A NISCS L FV+ISHN L
Sbjct: 231 RLQQFDISSNKFVGPIPSSIFYLPSIQYLNLAKNQFTGAFQTNISCSGNLRFVDISHNHL 290
Query: 301 IGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTR 360
IGKLPSC+ SNS N TV+S+WNCLSG N YQ P S CRKEALAVKPP +D Q +
Sbjct: 291 IGKLPSCVRSNSSNLTVISSWNCLSGGNLGYQLPNSVCRKEALAVKPPTR---NDAQKSS 347
Query: 361 VDVGLILGIIGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKYER-SVADKMSVRGSPKPAI 419
+GLILG++ G+VG +VV GLL L + R+S+ + D + + SVA K + S KP
Sbjct: 348 SKLGLILGVVAGIVGVLVVLGLLTLAIFRKSRPNKSETDIFNQGSVAYKSPLHSSSKPIS 407
Query: 420 DSRR--------VPQTMRSA----AIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQL 467
++ + QT G P F LEE+E+ATNNFDP+NLI EGSQGQ
Sbjct: 408 EASKPFALLFLLCEQTCAHHNGVRHTGAPTVSCFHLEEMEDATNNFDPSNLIAEGSQGQS 467
Query: 468 YKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527
YKG+L DGS V VKCLKLK +H PQSL Q +E ++KLRH+HLVS+LGHCI+TYQ+HPNT
Sbjct: 468 YKGWLRDGSEVLVKCLKLKHKHSPQSLPQQMEAVTKLRHQHLVSVLGHCIVTYQEHPNTA 527
Query: 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL 587
STVFLV+EH++NGSLRD+LTD +++++LKWPQR+ I IG RG+QFLHTG APGIFGNNL
Sbjct: 528 STVFLVVEHVANGSLRDHLTDRRRREILKWPQRLGISIGIARGIQFLHTGNAPGIFGNNL 587
Query: 588 KTENILLDKALTAKLSGYNIPLPSKKGLESPLRG-QYVSNQPG--DGAKEDVYQLGVILL 644
K EN+LL++ LT K+S YNIPL K G ESPL G ++ S+ G + ++D+YQLGVILL
Sbjct: 588 KIENVLLNEKLTTKISNYNIPLRFKVGSESPLNGPKFRSDLQGAQEAERDDIYQLGVILL 647
Query: 645 QVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCL 704
++ITGKQV S SE+D LKLQLE L EA SKLRA DPS+RGT+AY+SL TV+IT+NCL
Sbjct: 648 EIITGKQVTSESELDELKLQLERGLTEAASKLRALTDPSIRGTFAYESLTNTVQITLNCL 707
Query: 705 SKDAAKRPSIEDVLWNLQYSIQVQEGWTSSGNLST 739
SKD+ KRPSI DVLWNLQYS+QVQEGW SS LST
Sbjct: 708 SKDSRKRPSIADVLWNLQYSVQVQEGWASSEGLST 742
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449434813|ref|XP_004135190.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Cucumis sativus] gi|449478441|ref|XP_004155319.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/734 (59%), Positives = 550/734 (74%), Gaps = 12/734 (1%)
Query: 7 VSLCFKLFLVIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSS 66
VS F IF ++ PVS GQL PSETRILF++QKLLEYP QGW++WTNFCYLP S
Sbjct: 6 VSFSFWFPAFIFAVIFPVSTGQLPPSETRILFEIQKLLEYPVAFQGWSNWTNFCYLPPSP 65
Query: 67 SLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNL 126
SLKIVC+ + +TELTVIGNKSSP+ +PK S Q+LS +F+ID FFT+LTKLSNL
Sbjct: 66 SLKIVCSGNHITELTVIGNKSSPSKAPKSVSVSSIPSPQTLSNSFSIDSFFTVLTKLSNL 125
Query: 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNG 186
++LSLVSLGLWGP PSK+NRF SLEVLNISSNFIYG IP I+ L++LKS+VLADNLLNG
Sbjct: 126 RLLSLVSLGLWGPFPSKVNRFSSLEVLNISSNFIYGGIPTTISKLQSLKSLVLADNLLNG 185
Query: 187 SVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFD 246
SVPDL+ L +LEELNLG N G K PSL +N++ VILR N RSEIPS + ++L+ FD
Sbjct: 186 SVPDLRGLAVLEELNLGQNQLGQKVPSLGENLMIVILRKNLFRSEIPSRILQLNKLQLFD 245
Query: 247 ISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPS 306
IS N F+GP+ + LFSLP++ YLNLA NQLS AL +N +C+ L FV+ISHNLLIGKLPS
Sbjct: 246 ISYNKFLGPVHASLFSLPAVQYLNLAYNQLSGALSINTTCNRNLKFVDISHNLLIGKLPS 305
Query: 307 CIGSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTRVDVGLI 366
CI NS NRTV +WNCLS ++K QH YS+C KEA+AVKPP +V+ +Q +G +
Sbjct: 306 CIRPNSSNRTVNISWNCLSSGSSKDQHTYSYCHKEAMAVKPPGDVQ---KQKISSKLGFM 362
Query: 367 LGIIGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQ 426
L +IGG VG V LLV +IR + G+ KYE+S ADK+SVRGSP P +R VPQ
Sbjct: 363 LAVIGGAVGISGVVLLLVYAIIRNRRRRRFGETKYEKSTADKLSVRGSPLP---NRHVPQ 419
Query: 427 TMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLK 486
T R A+GLPP+R F+LEEIE+ T NFDP+N+ + Q + YKG+L DGS V +KC KLK
Sbjct: 420 T-RLPALGLPPYRVFTLEEIEDITKNFDPSNVAAKEPQAKTYKGWLPDGSVVLIKCFKLK 478
Query: 487 QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
Q+ +PQ+L +H+E L +RHRHLVS+LGHC T+QD N +TVF+V E+ISNGSL+D L
Sbjct: 479 QKLIPQALARHMEELPNMRHRHLVSVLGHCTFTHQDQLNPATTVFVVNEYISNGSLKDCL 538
Query: 547 TDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606
TDWK++D LKWPQRM I IG RG+Q LHTG+A GIFGN++K ++ILLD+ L+AK+S YN
Sbjct: 539 TDWKRRDALKWPQRMGITIGIARGIQHLHTGMASGIFGNDIKIDSILLDETLSAKISNYN 598
Query: 607 IPLPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLE 666
I +P LE+ G V+ + + KED++Q G ILLQVI G+ + TSE+ LK + E
Sbjct: 599 ILMP----LENAETGLNVTKRSENPEKEDIFQFGAILLQVINGRPITETSELYDLKSEFE 654
Query: 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726
+ LAE KLR D S++G++A+DSL+TT++I INCLSKD KRPSIEDVLWNLQYS+Q
Sbjct: 655 SGLAEV-LKLRGVIDASIQGSFAFDSLKTTIQIAINCLSKDPNKRPSIEDVLWNLQYSMQ 713
Query: 727 VQEGWTSSGNLSTM 740
VQEGWTSSGNL T
Sbjct: 714 VQEGWTSSGNLGTF 727
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356497862|ref|XP_003517775.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/757 (57%), Positives = 538/757 (71%), Gaps = 47/757 (6%)
Query: 1 MEKFRVVSLCF---KLFLVIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWT 57
M+ F +VSL + + +I ++L P+ QLT SE RIL QVQKLLEYP+ L GWT+ T
Sbjct: 1 MKNF-LVSLYYLFPAIIAIILVLLTPIPSAQLTTSENRILLQVQKLLEYPQALHGWTNLT 59
Query: 58 NFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFF 117
NFC LPSS SL IVC+N VTELTV+GN S ++LS F+I+ FF
Sbjct: 60 NFCSLPSSPSLNIVCSNGHVTELTVVGN-----------------SSETLSERFSIESFF 102
Query: 118 TILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
T+LTKLSNLKVLSLVSLGLWGPLPSKI+RFWSLEV+N SSNFIYGEI ++SLKNLKS+
Sbjct: 103 TVLTKLSNLKVLSLVSLGLWGPLPSKIDRFWSLEVMNFSSNFIYGEITPSVSSLKNLKSL 162
Query: 178 VLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLK 237
VLADNL NGSVPDL +L LEELNL GN GP+FPSLSKN+V VILRNNSLR IP L
Sbjct: 163 VLADNLFNGSVPDLGKLASLEELNLSGNKLGPEFPSLSKNLVRVILRNNSLRCRIPPQLM 222
Query: 238 NFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297
+ +L+ FDISSN G I SF+FSLPS+ YL LA NQLS +L +N+SCS+ L FV+ISH
Sbjct: 223 HVYKLELFDISSNVIFGNIPSFIFSLPSLKYLKLASNQLSGSLSLNVSCSSSLTFVDISH 282
Query: 298 NLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRK-EALAVKPPVNVKSDDE 356
NLL+G LPSC+GS + NRT + NCL + Q+P S+C+K EALAV P ++KS +
Sbjct: 283 NLLVGTLPSCVGSKASNRTTLYYGNCLINRSLSDQYPSSYCQKVEALAVIKP-SIKSQKK 341
Query: 357 QSTRVDVGLILGIIGGVVGFVVVFGLLVLVVIRRSKTTGAGDD-KYERSVADKMSVRGSP 415
+ + +G ILGI+GGVVG + LL+ + R+SK A D + S D SVR P
Sbjct: 342 E-PEMQLGQILGIVGGVVGISGLLALLIWCIFRKSKPEKADSDYSIDISAPDNFSVRAYP 400
Query: 416 KPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDG 475
+P I++RR P MR +G PP+ FSLEEIE+ATNNFDP+NLI EGSQGQLYKG+ DG
Sbjct: 401 RPNINARRPPLPMRQPFLGFPPYCIFSLEEIEDATNNFDPSNLIAEGSQGQLYKGWHIDG 460
Query: 476 SRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLE 535
S V V C+KLKQ+ L ++ +Q +++L LRHR+LVS+LGHCI+T+QD P STVF+V E
Sbjct: 461 SMVMVNCVKLKQKSLYKNSIQSLKVLPYLRHRNLVSVLGHCIITHQDRPQMISTVFIVFE 520
Query: 536 HISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
H+SN SLRDYL D +K++MLKWPQRM I IG RG+QFLHT V PGIFGNN+K ENILLD
Sbjct: 521 HVSNVSLRDYLADRRKREMLKWPQRMEISIGIGRGIQFLHTRVHPGIFGNNIKIENILLD 580
Query: 596 KALTAKLSGYNIPLPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKST 655
L K+SGY+IP PSK +R QY+ + D KED+YQ GVILLQVITGK + S+
Sbjct: 581 DCLNGKVSGYSIPWPSKVR----VRKQYIID---DAEKEDIYQFGVILLQVITGKLITSS 633
Query: 656 SEVDGLKLQLETCLAEAPSK---------------LRAEADPSVRGTYAYDSLRTTVEIT 700
SEV+ +K +LE LAEA S L+ D S+R T Y+SL+T V+IT
Sbjct: 634 SEVEEVKDELERGLAEAASPSLRGASPSLKGTSPILKGVFDSSLRETCVYESLKTAVQIT 693
Query: 701 INCLSKDAAKRPSIEDVLWNLQYSIQVQEGWTSSGNL 737
I+CLSK ++ RPSIEDVLWNLQYS+QVQE TS +L
Sbjct: 694 ISCLSKVSSNRPSIEDVLWNLQYSMQVQEPRTSGVHL 730
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356501912|ref|XP_003519767.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/742 (55%), Positives = 509/742 (68%), Gaps = 71/742 (9%)
Query: 16 VIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNS 75
+I ++L P+ QLT SE RIL QVQKLLEYP+ LQGWT+ TNFC LP L IVC N
Sbjct: 18 IILVLLTPIPSAQLTTSENRILLQVQKLLEYPQALQGWTNLTNFCSLPPP--LSIVCFNG 75
Query: 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG 135
VTELTV+GN S +LS F+I+ FFT+LTKLSN+KVLSLVSLG
Sbjct: 76 HVTELTVVGN-----------------SSWTLSERFSIESFFTVLTKLSNMKVLSLVSLG 118
Query: 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLV 195
LWGPLPSKI+RFWSLEV+N SSNFIYGEI ++SLKNLKS+VLA+NL NGSVPDL +L
Sbjct: 119 LWGPLPSKIDRFWSLEVMNFSSNFIYGEISPSVSSLKNLKSLVLANNLFNGSVPDLGKLA 178
Query: 196 LLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGP 255
LEELNL GN GP+FPSLSKN+V VILRNNSLR IP L + +L+ FDISSN G
Sbjct: 179 SLEELNLSGNKLGPEFPSLSKNLVRVILRNNSLRCRIPPQLIHVYKLELFDISSNVIFGN 238
Query: 256 IQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNR 315
I SF+FSLPS+ YLNLA NQLS L +N+SCS+ L FV+ISHNLL+G LPSCIGSN+ NR
Sbjct: 239 IPSFIFSLPSLKYLNLASNQLSGYLSLNVSCSSSLTFVDISHNLLVGTLPSCIGSNASNR 298
Query: 316 TVVSTWNCLSGVN-TKYQHPYSFCRK-EAL-AVKPPVNVKSDDEQSTRVDVGLILGIIGG 372
T + NCL + Q+P S+C+K E+L AVKP + + + + + I+G + G
Sbjct: 299 TTLYYGNCLVTRSLLSDQYPSSYCQKVESLAAVKPSIKSQKREPEMELGQIIGIVGGVVG 358
Query: 373 VVGFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAA 432
+ G +V LL+ + R+SK A RR P MR
Sbjct: 359 IAGLMV---LLIWCIFRKSKLEKA------------------------DRRPPLPMRQPV 391
Query: 433 IGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ 492
+G PP+ FS+EEIE+ATNNFDP+NLI EGSQ QLYKG+L DGS V V KLKQ+ L +
Sbjct: 392 LGFPPYCIFSIEEIEDATNNFDPSNLIAEGSQEQLYKGWLIDGSMVMVNRNKLKQKSLHK 451
Query: 493 SLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK 552
+ +Q +++L LRHRHLVS+LGHC++T+ DHP ST+F+V EH+SN SLRDYL D +K+
Sbjct: 452 NSIQSLKVLPYLRHRHLVSVLGHCVITHHDHPQMISTIFIVFEHVSNVSLRDYLADRRKR 511
Query: 553 DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612
+MLKWPQRMAI IG RG+QFLHT V PGIFGNN+K ENILLD L AK+SGY+IP PSK
Sbjct: 512 EMLKWPQRMAISIGIARGIQFLHTRVHPGIFGNNIKIENILLDDCLNAKVSGYSIPWPSK 571
Query: 613 KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672
+R +YV N D KED+YQ GVILL+VITGK + S+SEV+ LK LE LAEA
Sbjct: 572 VR----VRKEYVIN---DAEKEDIYQFGVILLEVITGKLITSSSEVEELKNDLERGLAEA 624
Query: 673 PSK---------------LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDV 717
S L+ +D S+R T ++SL+TTV+ITI+CLSK ++ RPSIED+
Sbjct: 625 SSPSLKGATPSLKGTSPILKGMSDSSLRDTCVHESLKTTVQITISCLSKVSSNRPSIEDI 684
Query: 718 LWNLQYSIQVQEGWTSSGNLST 739
LWNLQYS+QVQE TS + T
Sbjct: 685 LWNLQYSMQVQEPRTSGVHFFT 706
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297844344|ref|XP_002890053.1| hypothetical protein ARALYDRAFT_471612 [Arabidopsis lyrata subsp. lyrata] gi|297335895|gb|EFH66312.1| hypothetical protein ARALYDRAFT_471612 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/731 (56%), Positives = 516/731 (70%), Gaps = 50/731 (6%)
Query: 25 SIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIG 84
S QL SE+R L ++QK L+YP +L+ W++ TNFCYLPSS S KI+C N VTELTV G
Sbjct: 28 SESQLISSESRTLLEIQKHLQYPPILRSWSNRTNFCYLPSSPSFKILCFNGHVTELTVTG 87
Query: 85 NKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKI 144
N++ L ++ D FT+LTKLSNLK LSLVSLG+ GPLP+KI
Sbjct: 88 NRTV-----------------KLPGRYSSDSLFTVLTKLSNLKTLSLVSLGISGPLPTKI 130
Query: 145 NR-FWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLG 203
R SL+ LN+SSNFI G+IP EI+SLKNL+S+VLA+NL NGSVPDL+ L L+ELNLG
Sbjct: 131 IRLSSSLQSLNLSSNFISGKIPKEISSLKNLRSLVLANNLFNGSVPDLRGLSNLQELNLG 190
Query: 204 GNDFGPK-FPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFS 262
GN GP+ PSL+ N+++V L+NNS S+IP +K +L+ D+SSN F G I FLFS
Sbjct: 191 GNKLGPEVLPSLASNLITVSLKNNSFGSKIPEQIKKLSKLQNLDLSSNKFTGSIPRFLFS 250
Query: 263 LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWN 322
LPS+ L+LA N LS +LP + CS+KL +++S NLL GKLPSC S +TV+ T+N
Sbjct: 251 LPSLQNLSLAQNLLSGSLPNSSLCSSKLRILDVSRNLLTGKLPSCFFSK--KQTVLFTFN 308
Query: 323 CLS---GVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTRVDVGLILG-IIGGVVGFVV 378
CLS + KYQ P +FC EA V + D++ + D G+ LG +IG ++G V+
Sbjct: 309 CLSIKGSPSAKYQRPVTFCENEAKQAVAAVKSDTKDQERKKEDTGIELGLVIGIIIGVVL 368
Query: 379 VFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRG------SPKPAIDSRRVPQTMRSAA 432
V +L +++ R + + + ++ +E + DK VR + K D RRVPQTMRSA
Sbjct: 369 VSAVLAGLILFRMRKSKSKEELFEANNVDK-EVRSNTTRSTTSKTVPDPRRVPQTMRSAV 427
Query: 433 IGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ 492
IGL P+R FSLEE+EEATNNFD NL GE QLYKG L +G V+V+C+KLKQ++ Q
Sbjct: 428 IGLSPYRVFSLEELEEATNNFDAANLCGE----QLYKGCLREGIAVTVRCIKLKQKNSTQ 483
Query: 493 SLMQHVELLSKLRHRHLVSILGHCILTYQD-HPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+L Q +E+LSKLRH HLVS+LGHCI TYQD HP GST+F+V E+ISNGSLRDYL DW+K
Sbjct: 484 NLAQQMEVLSKLRHMHLVSVLGHCIGTYQDHHPYAGSTIFIVQEYISNGSLRDYLIDWRK 543
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611
K++LKWPQRM+I IG RG+QFLHTGVAPGIFGNNL+ EN+LLD+ LT KLSGY IPLPS
Sbjct: 544 KEVLKWPQRMSIAIGVARGIQFLHTGVAPGIFGNNLEIENVLLDETLTVKLSGYTIPLPS 603
Query: 612 KKGL----ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQV-KSTSEVDGLKLQLE 666
K + ESP SN DG KEDVYQ GVILLQ+ITGK + ++SE+ LKLQLE
Sbjct: 604 KSFIFIYTESP------SND--DGEKEDVYQFGVILLQIITGKVLAAASSELGSLKLQLE 655
Query: 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726
L + PS LR+ ADP VRGTYAY+SLRTTVE INCL +D RPSIEDV+WNLQY+IQ
Sbjct: 656 NSLRDEPSVLRSLADPCVRGTYAYESLRTTVEFAINCLCEDQRNRPSIEDVVWNLQYTIQ 715
Query: 727 VQEGWTSSGNL 737
VQ+GWTSSGNL
Sbjct: 716 VQQGWTSSGNL 726
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|75191439|sp|Q9M9S4.1|Y1143_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g14390; Flags: Precursor gi|7262681|gb|AAF43939.1|AC012188_16 Contains similarity to a Receptor-like Protein Kinase 5 Precursor from Arabidopsis thaliana gi|1350783 and contains an Eukaryotic Protein Kinase PF|00069 domain and Leucine Rich PF|00560 repeats [Arabidopsis thaliana] gi|224589392|gb|ACN59230.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/731 (55%), Positives = 513/731 (70%), Gaps = 50/731 (6%)
Query: 24 VSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVI 83
VS QL SE+R L ++QK L+YP L+ W++WTNFCYLPSS S KI+C N VTELTV
Sbjct: 24 VSESQLISSESRTLLEIQKHLQYPPTLRSWSNWTNFCYLPSSPSFKILCFNGHVTELTVT 83
Query: 84 GNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSK 143
GN++ L F+ D FT+LTKLSNLK LSLVSLG+ GPLPS+
Sbjct: 84 GNRTV-----------------KLPGRFSSDSLFTVLTKLSNLKTLSLVSLGISGPLPSQ 126
Query: 144 INRFWSLEVLNISSN-FIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNL 202
I R S S+ FI G IP EI+SLKNL+S+VLA+NL NGSVPDL+ L L+ELNL
Sbjct: 127 IIRLSSSLQSLNLSSNFISGNIPKEISSLKNLRSLVLANNLFNGSVPDLRGLSNLQELNL 186
Query: 203 GGNDFGPKF-PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261
GGN GP+ PSL+ N++++ L+NNS S+IP +K ++L+ D+SSN F G I FL
Sbjct: 187 GGNKLGPEVVPSLASNLITISLKNNSFGSKIPEQIKKLNKLQSLDLSSNKFTGSIPRFLL 246
Query: 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTW 321
SLPS+ L+LA N LS +LP + C++KL +++S NLL GKLPSC S ++ T+
Sbjct: 247 SLPSLQNLSLAQNLLSGSLPNSSLCNSKLRILDVSRNLLTGKLPSCFSSKK-QTVLLFTF 305
Query: 322 NCLS---GVNTKYQHPYSFCRKEA----LAVKPPVNVKSDDEQSTRVDVGLILGIIGGVV 374
NCLS + KYQ P +FC EA AVK K E+ T +++GL++GII GV+
Sbjct: 306 NCLSINGSPSAKYQRPVTFCENEAKQAVAAVKSDTKDKERKEEDTGIELGLVIGIIIGVI 365
Query: 375 GFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSV------RGSPKPAIDSRRVPQTM 428
V LVLV +R+S++ ++ E + D+++V + K D RRVPQTM
Sbjct: 366 LVSAVLAGLVLVRMRKSRSK---EEPLEANNVDQVTVCSNTTRSTTSKTVPDLRRVPQTM 422
Query: 429 RSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR 488
RSA IGL P+R FSLEE+EEATNNFD NL GE QLYKG L +G V+V+C+KLKQ+
Sbjct: 423 RSAVIGLSPYRVFSLEELEEATNNFDAENLCGE----QLYKGCLREGIAVTVRCIKLKQK 478
Query: 489 HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH-PNTGSTVFLVLEHISNGSLRDYLT 547
+ Q+L Q +E+LSKLRH HLVS+LGHCI TYQDH P GST+F+V E+ISNGSLRDYLT
Sbjct: 479 NSTQNLAQQMEVLSKLRHMHLVSVLGHCIGTYQDHHPYAGSTIFIVQEYISNGSLRDYLT 538
Query: 548 DWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
DW+KK++LKWPQRM+I IG RG+QFLHTGVAPGIFGNNL+ EN+LLD+ LT KLSGY+I
Sbjct: 539 DWRKKEVLKWPQRMSIAIGVARGIQFLHTGVAPGIFGNNLEIENVLLDETLTVKLSGYSI 598
Query: 608 PLPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQV-KSTSEVDGLKLQLE 666
PLPSK G ESP SN+ DG KEDVYQ GVIL+Q+ITGK + ++SE+ LKLQLE
Sbjct: 599 PLPSKVGAESP------SNE--DGEKEDVYQFGVILIQIITGKVIAAASSELGSLKLQLE 650
Query: 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726
L + PS LR+ ADP VRGTYAY+SLRTTVE INCL +D KRPSIEDV+WNLQY+IQ
Sbjct: 651 NSLRDEPSVLRSLADPCVRGTYAYESLRTTVEFAINCLCEDQRKRPSIEDVVWNLQYTIQ 710
Query: 727 VQEGWTSSGNL 737
VQ+GWTSS NL
Sbjct: 711 VQQGWTSSENL 721
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15223744|ref|NP_172891.1| putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] gi|332191036|gb|AEE29157.1| putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/750 (54%), Positives = 513/750 (68%), Gaps = 69/750 (9%)
Query: 24 VSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVI 83
VS QL SE+R L ++QK L+YP L+ W++WTNFCYLPSS S KI+C N VTELTV
Sbjct: 24 VSESQLISSESRTLLEIQKHLQYPPTLRSWSNWTNFCYLPSSPSFKILCFNGHVTELTVT 83
Query: 84 GNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSK 143
GN++ L F+ D FT+LTKLSNLK LSLVSLG+ GPLPS+
Sbjct: 84 GNRTV-----------------KLPGRFSSDSLFTVLTKLSNLKTLSLVSLGISGPLPSQ 126
Query: 144 INRFWSLEVLNISSN-FIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNL 202
I R S S+ FI G IP EI+SLKNL+S+VLA+NL NGSVPDL+ L L+ELNL
Sbjct: 127 IIRLSSSLQSLNLSSNFISGNIPKEISSLKNLRSLVLANNLFNGSVPDLRGLSNLQELNL 186
Query: 203 GGNDFGPKF-PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261
GGN GP+ PSL+ N++++ L+NNS S+IP +K ++L+ D+SSN F G I FL
Sbjct: 187 GGNKLGPEVVPSLASNLITISLKNNSFGSKIPEQIKKLNKLQSLDLSSNKFTGSIPRFLL 246
Query: 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTW 321
SLPS+ L+LA N LS +LP + C++KL +++S NLL GKLPSC S ++ T+
Sbjct: 247 SLPSLQNLSLAQNLLSGSLPNSSLCNSKLRILDVSRNLLTGKLPSCFSSKK-QTVLLFTF 305
Query: 322 NCLS---GVNTKYQHPYSFCRKEA----LAVKPPVNVKSDDEQSTRVDVGLILGIIGGVV 374
NCLS + KYQ P +FC EA AVK K E+ T +++GL++GII GV+
Sbjct: 306 NCLSINGSPSAKYQRPVTFCENEAKQAVAAVKSDTKDKERKEEDTGIELGLVIGIIIGVI 365
Query: 375 GFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSV------RGSPKPAIDSRRVPQTM 428
V LVLV +R+S++ ++ E + D+++V + K D RRVPQTM
Sbjct: 366 LVSAVLAGLVLVRMRKSRSK---EEPLEANNVDQVTVCSNTTRSTTSKTVPDLRRVPQTM 422
Query: 429 RSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR 488
RSA IGL P+R FSLEE+EEATNNFD NL GE QLYKG L +G V+V+C+KLKQ+
Sbjct: 423 RSAVIGLSPYRVFSLEELEEATNNFDAENLCGE----QLYKGCLREGIAVTVRCIKLKQK 478
Query: 489 HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH-PNTGSTVFLVLEHISNGSLRDYLT 547
+ Q+L Q +E+LSKLRH HLVS+LGHCI TYQDH P GST+F+V E+ISNGSLRDYLT
Sbjct: 479 NSTQNLAQQMEVLSKLRHMHLVSVLGHCIGTYQDHHPYAGSTIFIVQEYISNGSLRDYLT 538
Query: 548 DWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
DW+KK++LKWPQRM+I IG RG+QFLHTGVAPGIFGNNL+ EN+LLD+ LT KLSGY+I
Sbjct: 539 DWRKKEVLKWPQRMSIAIGVARGIQFLHTGVAPGIFGNNLEIENVLLDETLTVKLSGYSI 598
Query: 608 PLPSK-------------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT 648
PLPSK G ESP SN+ DG KEDVYQ GVIL+Q+IT
Sbjct: 599 PLPSKLLIFSLTSHEIYNLLGEFQVGAESP------SNE--DGEKEDVYQFGVILIQIIT 650
Query: 649 GKQV-KSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKD 707
GK + ++SE+ LKLQLE L + PS LR+ ADP VRGTYAY+SLRTTVE INCL +D
Sbjct: 651 GKVIAAASSELGSLKLQLENSLRDEPSVLRSLADPCVRGTYAYESLRTTVEFAINCLCED 710
Query: 708 AAKRPSIEDVLWNLQYSIQVQEGWTSSGNL 737
KRPSIEDV+WNLQY+IQVQ+GWTSS NL
Sbjct: 711 QRKRPSIEDVVWNLQYTIQVQQGWTSSENL 740
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 740 | ||||||
| TAIR|locus:2079339 | 802 | AT3G03770 [Arabidopsis thalian | 0.787 | 0.726 | 0.410 | 1.6e-116 | |
| TAIR|locus:2167326 | 680 | AT5G63410 [Arabidopsis thalian | 0.771 | 0.839 | 0.322 | 4.3e-70 | |
| TAIR|locus:2182870 | 1192 | EMS1 "EXCESS MICROSPOROCYTES1" | 0.387 | 0.240 | 0.314 | 1.7e-40 | |
| TAIR|locus:2181017 | 951 | AT5G01950 [Arabidopsis thalian | 0.367 | 0.286 | 0.288 | 2.1e-40 | |
| TAIR|locus:2019863 | 971 | AT1G79620 [Arabidopsis thalian | 0.395 | 0.301 | 0.317 | 1.8e-39 | |
| TAIR|locus:2120362 | 1249 | GSO1 "GASSHO1" [Arabidopsis th | 0.354 | 0.209 | 0.289 | 8e-39 | |
| TAIR|locus:2009630 | 953 | AT1G53420 [Arabidopsis thalian | 0.370 | 0.287 | 0.290 | 1.2e-38 | |
| TAIR|locus:2136338 | 878 | AT4G39110 [Arabidopsis thalian | 0.391 | 0.330 | 0.358 | 1.6e-38 | |
| UNIPROTKB|Q942F3 | 1121 | P0480C01.18-1 "cDNA clone:J033 | 0.643 | 0.424 | 0.250 | 1.9e-38 | |
| TAIR|locus:2050080 | 871 | AT2G21480 [Arabidopsis thalian | 0.393 | 0.334 | 0.350 | 2.7e-38 |
| TAIR|locus:2079339 AT3G03770 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
Identities = 245/597 (41%), Positives = 352/597 (58%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVXXXXXXXXXXDFG 208
SL VL++ N + G +P ++SL L+ + LA+N NG++PDL L FG
Sbjct: 178 SLAVLSLRKNVLNGSLPSSLSSLSGLRVLALANNRFNGALPDLSHLTNLQVLDLEGNSFG 237
Query: 209 PKFPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSIL 267
P FP LS +V++IL N RS + + + + QL+ D+S N FVGP + L SLP+I
Sbjct: 238 PLFPRLSNKLVTLILSKNKFRSAVSAEEVSSLYQLQHLDLSYNTFVGPFPTSLMSLPAIT 297
Query: 268 YLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIG-SNSLNRTVVSTWNCLSG 326
YLN++ N+L+ L N+SC+++L FV++S NLL G LP+C+ S+ +R VV NCL+
Sbjct: 298 YLNISHNKLTGRLSANLSCNSQLMFVDMSSNLLTGSLPTCLKPSSGTSRDVVYASNCLAT 357
Query: 327 VNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTRVDXXXXXXXXXXXXXXXXXXXXXXXX 386
N Q P SFC EALAV + ++ +V
Sbjct: 358 TNED-QRPVSFCSNEALAV----GILP--QRRNKVSKVGIALGVTASILGVLLLAGALFV 410
Query: 387 XXRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEI 446
RR R + + S+ + K D+R + QTM+ +GLP +R FSLEE+
Sbjct: 411 VLRRLNAKKTVTKSSPRLIRENASMGYTSKLLSDARYISQTMKLGGLGLPAYRTFSLEEL 470
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH 506
E ATNNF+ + +GEGSQGQ+Y+G L DGS V+++CLK+K+ Q+LM H+EL++KLRH
Sbjct: 471 EYATNNFESSAFMGEGSQGQIYRGRLKDGSFVAIRCLKMKKSCSTQNLMHHIELIAKLRH 530
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
RHLVS+LGHC Y D +T S +F V E++ NG LR +++D +L W QR+++ IG
Sbjct: 531 RHLVSVLGHCFECYLDD-STVSRMFFVFEYVPNGELRTWISDGHMGRLLTWEQRISVAIG 589
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP----SKKGLESPLRGQ 622
+G+QFLHTG+ PG++ NNLK +ILLD L AKLS YN+PL K G G
Sbjct: 590 VAKGIQFLHTGIVPGVYDNNLKMTDILLDNNLAAKLSSYNLPLLVEGLGKVGQVGSRSGP 649
Query: 623 YVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682
+ D K D+Y GVILL++I G+ +++ S+VD LK QL+ ++ R+ DP
Sbjct: 650 KGTPSIKDEDKIDIYDFGVILLELIVGRPLRAKSQVDVLKEQLQASISADDGARRSMVDP 709
Query: 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQEGWTSSGNLST 739
+V + SL+T +EI + CL KD +RPSIEDVLWNLQ++ QVQEGW + N S+
Sbjct: 710 TVHRACSDQSLKTMMEICVRCLLKDPLERPSIEDVLWNLQFASQVQEGWLQNSNPSS 766
|
|
| TAIR|locus:2167326 AT5G63410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 190/590 (32%), Positives = 291/590 (49%)
Query: 148 WSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVXXXXXXXXXXD 206
+++ + +S F ++ LK+L+ + LA + G +P+ L RL
Sbjct: 93 FAISNVTLSDGFSIESFVTTLSRLKSLRVLTLASLGIWGRLPEKLHRLSSLEYLDLSNNF 152
Query: 207 -FGPKFPSLSKNIVSVILR--NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSL 263
FG P LS + R +N +PS ++ LK SN G + S L SL
Sbjct: 153 LFGSVPPKLSTMVKLETFRFDHNFFNGTLPSWFDSYWYLKVLSFKSNKLSGELHSSLLSL 212
Query: 264 PSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC 323
+I Y++L N LS +LP ++ C +KL F++IS N L GKLP C+ S + + NC
Sbjct: 213 STIEYIDLRANSLSGSLPDDLKCGSKLWFIDISDNKLTGKLPRCLSSKQ-DIALRFNGNC 271
Query: 324 LSGVNTKYQHPYSFCRKEA-LAVKPPVNVKSD--DEQSTRVDXXXXXXXXXXXXXXXXXX 380
LS K QHP SFC KE A K +++ +E R
Sbjct: 272 LS--LEKQQHPESFCVKEVRAAAKAEAKAEAEAANESGKRKWKKGALIGLIVGISMSVLV 329
Query: 381 XXXXXXXXRRSKTTGAGDDKYERSVADKMSVRG-SPKPAIDSRRVPQTMRSAAIGLPPFR 439
R K + +V D G S + ++R + +T + + LP R
Sbjct: 330 LVCCVFILLRRKGV-TKKHVHHNTVQDNHPTTGFSSEILSNARYISETSKFGSEDLPVCR 388
Query: 440 GFSLEEIEEATNNFDPTNLIGEGS-QGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHV 498
FSLEEI +AT NFD T ++GE S G LYKG L +G++V+++CL +++ ++L +
Sbjct: 389 QFSLEEIVKATKNFDKTMILGESSLYGTLYKGNLENGTKVAIRCLPSSKKYSIRNLKLRL 448
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
+LL+KLRH +LV +LGHCI + VFL+ E+I NG+ + L+D + W
Sbjct: 449 DLLAKLRHPNLVCLLGHCIDCGGKDDYSVEKVFLIYEYIPNGNFQSCLSDNSSGKGMNWS 508
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESP 618
+R+ ++ G + V FLHTGV PG F N LKT N+LL++ AKLS Y + + S+ +
Sbjct: 509 ERLNVLTGVAKAVHFLHTGVIPGFFSNRLKTNNVLLNQHRFAKLSDYGLSIVSEATRHNT 568
Query: 619 LRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678
+ + ++DVY G+ILLQ I G V + E L+ E E+ R
Sbjct: 569 ---EIAKSWQMSRLEDDVYSFGLILLQSIVGPSVSAREEAF---LRDELASLESEEGRRR 622
Query: 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQ 728
+P+V+ T SL + + C+S ++ RPS ED+LWNLQY+ Q+Q
Sbjct: 623 MVNPTVQATCRNGSLIRVITLMNKCVSPESLSRPSFEDILWNLQYASQLQ 672
|
|
| TAIR|locus:2182870 EMS1 "EXCESS MICROSPOROCYTES1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 318 (117.0 bits), Expect = 1.7e-40, Sum P(3) = 1.7e-40
Identities = 97/308 (31%), Positives = 153/308 (49%)
Query: 423 RVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKC 482
R P ++ A P + L +I EAT++F N+IG+G G +YK L V+VK
Sbjct: 888 REPLSINIAMFEQPLLK-VRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKK 946
Query: 483 LKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSL 542
L + + M +E L K++H +LVS+LG+C + + LV E++ NGSL
Sbjct: 947 LSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEK--------LLVYEYMVNGSL 998
Query: 543 RDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601
+L + ++L W +R+ I +GA RG+ FLH G P I ++K NILLD K
Sbjct: 999 DHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPK 1058
Query: 602 LSGYNIP-LPS--KKGLESPLRGQ--YVSNQPGDGA----KEDVYQLGVILLQVITGKQV 652
++ + + L S + + + + G Y+ + G A K DVY GVILL+++TGK+
Sbjct: 1059 VADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEP 1118
Query: 653 KSTS--EVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAK 710
E +G L K DP + +S ++I + CL++ AK
Sbjct: 1119 TGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAK 1178
Query: 711 RPSIEDVL 718
RP++ DVL
Sbjct: 1179 RPNMLDVL 1186
|
|
| TAIR|locus:2181017 AT5G01950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 331 (121.6 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 88/305 (28%), Positives = 158/305 (51%)
Query: 439 RGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHV 498
RGFS +E+ EAT++F + L+G G G++Y+G L+D + ++K + + +
Sbjct: 612 RGFSFKELAEATDDFSSSTLVGRGGYGKVYRGVLSDNTVAAIKRADEGSLQGEKEFLNEI 671
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
ELLS+L HR+LVS++G+C + S LV E +SNG+LRD+L+ K K+ L +
Sbjct: 672 ELLSRLHHRNLVSLIGYC--------DEESEQMLVYEFMSNGTLRDWLSA-KGKESLSFG 722
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI----PLPSK-- 612
R+ + +GA +G+ +LHT P +F ++K NILLD AK++ + + P+
Sbjct: 723 MRIRVALGAAKGILYLHTEANPPVFHRDIKASNILLDPNFNAKVADFGLSRLAPVLEDEE 782
Query: 613 ---KGLESPLRGQ--------YVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGL 661
K + + +RG +++++ D K DVY +GV+ L+++TG S G
Sbjct: 783 DVPKHVSTVVRGTPGYLDPEYFLTHKLTD--KSDVYSIGVVFLELLTGMHAIS----HGK 836
Query: 662 KLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721
+ E AE + + D + ++ +S+ + + C RP + +V+ L
Sbjct: 837 NIVREVKTAEQRDMMVSLIDKRME-PWSMESVEKFAALALRCSHDSPEMRPGMAEVVKEL 895
Query: 722 QYSIQ 726
+ +Q
Sbjct: 896 ESLLQ 900
|
|
| TAIR|locus:2019863 AT1G79620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 363 (132.8 bits), Expect = 1.8e-39, Sum P(2) = 1.8e-39
Identities = 102/321 (31%), Positives = 171/321 (53%)
Query: 434 GLPPFRG---FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL 490
G P +G FS EE+++ TNNF ++ +G G G++YKG L DG V++K +
Sbjct: 616 GAPQLKGARWFSYEELKKITNNFSVSSELGYGGYGKVYKGMLQDGHMVAIKRAQQGSTQG 675
Query: 491 PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK 550
+ELLS++ H++LV ++G C G + LV E++SNGSL+D LT +
Sbjct: 676 GLEFKTEIELLSRVHHKNLVGLVGFCF-------EQGEQI-LVYEYMSNGSLKDSLTG-R 726
Query: 551 KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP-L 609
L W +R+ + +G+ RG+ +LH P I ++K+ NILLD+ LTAK++ + + L
Sbjct: 727 SGITLDWKRRLRVALGSARGLAYLHELADPPIIHRDVKSTNILLDENLTAKVADFGLSKL 786
Query: 610 PSK--KG-LESPLRG-------QYVSNQPGDGAKEDVYQLGVILLQVITGKQV--KSTSE 657
S KG + + ++G +Y + Q K DVY GV+++++IT KQ K
Sbjct: 787 VSDCTKGHVSTQVKGTLGYLDPEYYTTQKLT-EKSDVYSFGVVMMELITAKQPIEKGKYI 845
Query: 658 VDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDV 717
V +KL + + LR + D S+R L +E+ + C+ + A +RP++ +V
Sbjct: 846 VREIKLVMNKSDDDFYG-LRDKMDRSLRDVGTLPELGRYMELALKCVDETADERPTMSEV 904
Query: 718 LWNLQYSIQVQEGWTSSGNLS 738
+ ++ IQ G +SS + S
Sbjct: 905 VKEIEIIIQ-NSGASSSSSAS 924
|
|
| TAIR|locus:2120362 GSO1 "GASSHO1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 311 (114.5 bits), Expect = 8.0e-39, Sum P(2) = 8.0e-39
Identities = 85/294 (28%), Positives = 146/294 (49%)
Query: 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLP-QSLMQHVELLS 502
E+I EAT+N +IG G G++YK L +G V+VK + K + +S + V+ L
Sbjct: 942 EDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMSNKSFSREVKTLG 1001
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD-----WKKKDMLKW 557
++RHRHLV ++G+C + G + L+ E++ NGS+ D+L + KKK +L W
Sbjct: 1002 RIRHRHLVKLMGYC-----SSKSEGLNL-LIYEYMKNGSIWDWLHEDKPVLEKKKKLLDW 1055
Query: 558 PQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLES 617
R+ I +G +GV++LH P I ++K+ N+LLD + A L + + + ++
Sbjct: 1056 EARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDT 1115
Query: 618 PLRGQ--------YVSNQPGDGAK----EDVYQLGVILLQVITGKQVKSTSEVDGLKLQL 665
Y++ + K DVY +G++L++++TGK T V G ++ +
Sbjct: 1116 NTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKM--PTDSVFGAEMDM 1173
Query: 666 ----ETCLAEAPSKLRAEADPSVRGTYAY--DSLRTTVEITINCLSKDAAKRPS 713
ET L A S DP ++ + D+ +EI + C +RPS
Sbjct: 1174 VRWVETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCTKTSPQERPS 1227
|
|
| TAIR|locus:2009630 AT1G53420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 320 (117.7 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
Identities = 85/293 (29%), Positives = 140/293 (47%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVEL 500
FSL +I+ ATNNFD N IGEG G +YKG L DG+ ++VK L + + + + +
Sbjct: 612 FSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGM 671
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQ 559
+S L H +LV + G C+ G + LV E + N SL L ++ + L WP
Sbjct: 672 ISALHHPNLVKLYGCCV--------EGGQLLLVYEFVENNSLARALFGPQETQLRLDWPT 723
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKG---LE 616
R I IG RG+ +LH I ++K N+LLDK L K+S + + ++ +
Sbjct: 724 RRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHIS 783
Query: 617 SPLRGQYVSNQPGDGA------KEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETC-L 669
+ + G + P K DVY G++ L+++ G+ K + ++ +
Sbjct: 784 TRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEV 843
Query: 670 AEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
+ L DP + Y + T ++I I C S + +RPS+ +V+ L+
Sbjct: 844 LREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLE 896
|
|
| TAIR|locus:2136338 AT4G39110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 439 (159.6 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 113/315 (35%), Positives = 169/315 (53%)
Query: 430 SAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH 489
++ +GL R FSL E++EAT NF+ + +IG G G +Y G L DG++V+VK +
Sbjct: 505 NSTLGLG--RYFSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQ 562
Query: 490 LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDW 549
+++LSKLRHRHLVS++G+C + S + LV E +SNG RD+L
Sbjct: 563 GITEFQTEIQMLSKLRHRHLVSLIGYC--------DENSEMILVYEFMSNGPFRDHLYG- 613
Query: 550 KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS------ 603
K L W QR+ I IG+ RG+ +LHTG A GI ++K+ NILLD+AL AK++
Sbjct: 614 KNLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSK 673
Query: 604 ----GYNIPLPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVD 659
G N + KG L +Y Q K DVY GV+LL+ + + + ++
Sbjct: 674 DVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTD-KSDVYSFGVVLLEALCARPAINP-QLP 731
Query: 660 GLKLQLETCLAEAPSK--LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDV 717
++ L + K L DP + GT +S++ E CL RP++ DV
Sbjct: 732 REQVNLAEWAMQWKRKGLLEKIIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRPTMGDV 791
Query: 718 LWNLQYSIQVQEGWT 732
LWNL+Y++Q+QE +T
Sbjct: 792 LWNLEYALQLQEAFT 806
|
|
| UNIPROTKB|Q942F3 P0480C01.18-1 "cDNA clone:J033069J12, full insert sequence" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 319 (117.4 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 132/527 (25%), Positives = 219/527 (41%)
Query: 246 DISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLP 305
D+S N I L + ++ +NL N LS +P ++ + KL +++S+N L G +P
Sbjct: 587 DLSYNQLDSAIPGELGDMFYLMIMNLGHNLLSGTIPSRLAEAKKLAVLDLSYNQLEGPIP 646
Query: 306 SC----------IGSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKPPVNVKSDD 355
+ + +N LN T+ + + ++Y++ C S+D
Sbjct: 647 NSFSALSLSEINLSNNQLNGTIPELGSLATFPKSQYENNTGLCGFPLPPCDHSSPRSSND 706
Query: 356 EQSTRVDXXXXXXXXXXXXXXXX---XXXXXXXXXXRRSKTTGAGD--DKYERSVADKMS 410
QS R RR K A D Y S + +
Sbjct: 707 HQSHRRQASMASSIAMGLLFSLFCIIVIIIAIGSKRRRLKNEEASTSRDIYIDSRSHSAT 766
Query: 411 VRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKG 470
+ + + + ++ AA P + +L ++ EATN F IG G G +YK
Sbjct: 767 MNSDWRQNLSGTNL-LSINLAAFE-KPLQNLTLADLVEATNGFHIACQIGSGGFGDVYKA 824
Query: 471 FLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530
L DG V++K L + +E + K++HR+LV +LG+C G
Sbjct: 825 QLKDGKVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYC--------KAGEER 876
Query: 531 FLVLEHISNGSLRDYLTDWKK-KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKT 589
LV +++ GSL D L D KK L W R I +GA RG+ FLH P I ++K+
Sbjct: 877 LLVYDYMKFGSLEDVLHDRKKIGKKLNWEARRKIAVGAARGLAFLHHNCIPHIIHRDMKS 936
Query: 590 ENILLDKALTAKLSGYNIP-LPSKKGLE---SPLRGQ--YVSNQPGDG----AKEDVYQL 639
N+L+D+ L A++S + + L S S L G YV + K DVY
Sbjct: 937 SNVLIDEQLEARVSDFGMARLMSVVDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSY 996
Query: 640 GVILLQVITGKQVKSTSE-------VDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDS 692
GV+LL+++TGK +++ V +K + + + + DPSV
Sbjct: 997 GVVLLELLTGKPPTDSADFGEDNNLVGWVKQHTKLKITDVFDPELLKEDPSVEL-----E 1051
Query: 693 LRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQEGWTSSGNLST 739
L ++I CL ++RP++ V+ + ++Q G T S+
Sbjct: 1052 LLEHLKIACACLDDRPSRRPTMLKVMAMFK---EIQAGSTVDSKTSS 1095
|
|
| TAIR|locus:2050080 AT2G21480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 437 (158.9 bits), Expect = 2.7e-38, P = 2.7e-38
Identities = 110/314 (35%), Positives = 168/314 (53%)
Query: 430 SAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH 489
++A+GL R FSL E++E T NFD + +IG G G +Y G + DG++V++K +
Sbjct: 504 NSALGLG--RYFSLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQSEQ 561
Query: 490 LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDW 549
+++LSKLRHRHLVS++G+C + + + LV E++SNG RD+L
Sbjct: 562 GITEFHTEIQMLSKLRHRHLVSLIGYC--------DENAEMILVYEYMSNGPFRDHLYG- 612
Query: 550 KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS------ 603
K L W QR+ I IGA RG+ +LHTG A GI ++K+ NILLD+AL AK++
Sbjct: 613 KNLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSK 672
Query: 604 ----GYNIPLPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQ-VKSTSEV 658
G N + KG L +Y Q K DVY GV+LL+ + + +
Sbjct: 673 DVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTD-KSDVYSFGVVLLEALCARPAINPQLPR 731
Query: 659 DGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ + L L + L DP + G +S++ E CL+ RP++ DVL
Sbjct: 732 EQVNLAEWAMLWKQKGLLEKIIDPHLVGAVNPESMKKFAEAAEKCLADYGVDRPTMGDVL 791
Query: 719 WNLQYSIQVQEGWT 732
WNL+Y++Q+QE ++
Sbjct: 792 WNLEYALQLQEAFS 805
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9M9S4 | Y1143_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.5595 | 0.9202 | 0.9354 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 740 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-28 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 6e-25 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-19 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-19 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 5e-18 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 9e-18 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-17 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 4e-17 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 5e-16 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 5e-16 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 5e-16 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-14 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 3e-13 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-11 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 4e-11 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 4e-11 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 7e-11 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 7e-11 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 1e-10 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 2e-10 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 3e-10 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 3e-10 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 5e-10 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 4e-09 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 8e-09 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 1e-08 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 1e-08 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 1e-08 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 2e-08 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 2e-08 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 2e-08 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 3e-08 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 4e-08 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 5e-08 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 1e-07 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 1e-07 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-07 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 3e-07 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 3e-07 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 4e-07 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 6e-07 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 6e-07 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 6e-07 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 6e-07 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 7e-07 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 8e-07 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-06 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 2e-06 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 5e-06 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 5e-06 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 5e-06 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 6e-06 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 7e-06 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 8e-06 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-05 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 1e-05 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-05 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 1e-05 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 1e-05 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 1e-05 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 2e-05 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 2e-05 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 3e-05 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 3e-05 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 4e-05 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 4e-05 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 4e-05 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 4e-05 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-05 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 5e-05 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 5e-05 | |
| PLN03210 | 1153 | PLN03210, PLN03210, Resistant to P | 8e-05 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 8e-05 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 1e-04 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 1e-04 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 1e-04 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-04 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 2e-04 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 2e-04 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 2e-04 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 3e-04 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 3e-04 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 3e-04 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 3e-04 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 4e-04 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 4e-04 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 5e-04 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 5e-04 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 5e-04 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 5e-04 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 6e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 6e-04 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 6e-04 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 6e-04 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 7e-04 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 8e-04 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 8e-04 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 0.001 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 0.001 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 0.001 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 0.001 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 0.001 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 0.002 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 0.003 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 0.003 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 0.003 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 0.004 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 1e-28
Identities = 152/618 (24%), Positives = 259/618 (41%), Gaps = 83/618 (13%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L +L+ + L G LPS+ + + L+IS+N + G I + +L+ + L
Sbjct: 400 LGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSL 459
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFG----PKFPSLSKNIVSVILRNNSLRSEIPSG 235
A N G +PD LE L+L N F K SLS+ ++ + L N L EIP
Sbjct: 460 ARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSE-LMQLKLSENKLSGEIPDE 518
Query: 236 LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295
L + +L D+S N G I + +P + L+L+ NQLS +P N+ L V I
Sbjct: 519 LSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNI 578
Query: 296 SHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKPPVNVKSDD 355
SHN L G LPS ++N + V+ L G +T + P V+
Sbjct: 579 SHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDT------------TSGLPPCKRVRKTP 626
Query: 356 EQSTRVDVGLILGIIGGVVGFVVVF--GLLVLVVIRRSKTTGAGDDKYERSVADKMSVRG 413
+ L ++ +V F VF G L + R G + ++
Sbjct: 627 SWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQF------------ 674
Query: 414 SPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKG-FL 472
DS+ +S ++ +I + N+I G +G YKG +
Sbjct: 675 -----FDSK----VSKS----------ITINDILSSLKE---ENVISRGKKGASYKGKSI 712
Query: 473 TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532
+G + VK + +P S + + KL+H ++V ++G C G+ +L
Sbjct: 713 KNGMQFVVKEIN-DVNSIPSSEIAD---MGKLQHPNIVKLIGLC------RSEKGA--YL 760
Query: 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592
+ E+I +L + L + L W +R I IG + ++FLH +P + NL E I
Sbjct: 761 IHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKI 814
Query: 593 LLDKALTAKLSGYNIPLPSKKGLESPLRGQYVSNQPGD----GAKEDVYQLGVILLQVIT 648
++D L ++P + + YV+ + + K D+Y G+IL++++T
Sbjct: 815 IIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLT 873
Query: 649 GK-QVKSTSEVDGLKLQL-ETCLAEAPSKLRAEADPSVRGTYAYDS--LRTTVEITINCL 704
GK + V G ++ C ++ L DPS+RG + + + + + ++C
Sbjct: 874 GKSPADAEFGVHGSIVEWARYCYSDC--HLDMWIDPSIRGDVSVNQNEIVEVMNLALHCT 931
Query: 705 SKDAAKRPSIEDVLWNLQ 722
+ D RP DVL L+
Sbjct: 932 ATDPTARPCANDVLKTLE 949
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 6e-25
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 25/199 (12%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHC 516
+GEG G +Y G +V++K +K + L + L++ +E+L KL H ++V + G
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
+ ++LV+E+ GSL+D L + + K L + + I++ G+++LH+
Sbjct: 61 E--------DENHLYLVMEYCEGGSLKDLLKENEGK--LSEDEILRILLQILEGLEYLHS 110
Query: 577 GVAPGIFGNNLKTENILLDKA-LTAKLS--GYNIPLPSKKGLESPLRG--QYVS-----N 626
GI +LK ENILLD KL+ G + L S K L + G Y++
Sbjct: 111 N---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLG 167
Query: 627 QPGDGAKEDVYQLGVILLQ 645
+ K D++ LGVIL +
Sbjct: 168 KGYYSEKSDIWSLGVILYE 186
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 88.8 bits (221), Expect = 1e-19
Identities = 75/275 (27%), Positives = 122/275 (44%), Gaps = 41/275 (14%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGH 515
+G GS G +YK G V+VK LK + Q+ + + +L +L H ++V ++
Sbjct: 7 LGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID- 65
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
++D + ++LV+E+ G L DYL+ L + I + RG+++LH
Sbjct: 66 ---AFEDKDH----LYLVMEYCEGGDLFDYLSRGGP---LSEDEAKKIALQILRGLEYLH 115
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLS------GYNIPLPSKKGLESPLRGQYVSN--- 626
+ GI +LK ENILLD+ K++ S Y++
Sbjct: 116 ---SNGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPW--YMAPEVL 170
Query: 627 --QPGDGAKEDVYQLGVILLQVITGKQ-VKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683
G G K DV+ LGVIL +++TGK + +D L+L P E S
Sbjct: 171 LGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQL---IRRILGPPLEFDEPKWS 227
Query: 684 VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
A D ++ CL+KD +KRP+ E++L
Sbjct: 228 SGSEEAKDLIK-------KCLNKDPSKRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 92.6 bits (230), Expect = 3e-19
Identities = 68/210 (32%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL 183
S+LKVL L L G +P+ + SLE L ++SN + G+IP E+ +K+LK I L N
Sbjct: 164 SSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNN 223
Query: 184 LNGSVP-DLQRLVLLEELNLGGNDF-GPKFPSLS-------------------------- 215
L+G +P ++ L L L+L N+ GP SL
Sbjct: 224 LSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSL 283
Query: 216 KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQ 275
+ ++S+ L +NSL EIP + L+ + SNNF G I L SLP + L L N+
Sbjct: 284 QKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNK 343
Query: 276 LSEALPVNISCSAKLNFVEISHNLLIGKLP 305
S +P N+ L +++S N L G++P
Sbjct: 344 FSGEIPKNLGKHNNLTVLDLSTNNLTGEIP 373
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 88.8 bits (220), Expect = 5e-18
Identities = 96/346 (27%), Positives = 151/346 (43%), Gaps = 43/346 (12%)
Query: 14 FLVIFMILVPVSIGQLTPSETRILFQVQKLLEYP-EVLQGWTDWTNFCYLPSSSSLKIVC 72
+L+ + + ++ L E +L + + P + L W + C I C
Sbjct: 11 YLIFMLFFLFLNFSMLHAEELELLLSFKSSINDPLKYLSNWNSSADVC-----LWQGITC 65
Query: 73 TN-SRVTELTV----IGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILT------ 121
N SRV + + I K S A P + S LS D F T +
Sbjct: 66 NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNL 125
Query: 122 ------------KLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT 169
+ NL+ L L + L G +P+ I F SL+VL++ N + G+IP +T
Sbjct: 126 SNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLT 185
Query: 170 SLKNLKSIVLADNLLNGSVP-DLQRLVLLEELNLGGNDFGPKFPSLSKNIVS---VILRN 225
+L +L+ + LA N L G +P +L ++ L+ + LG N+ + P + S + L
Sbjct: 186 NLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVY 245
Query: 226 NSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285
N+L IPS L N L+ + N GPI +FSL ++ L+L+ N LS +P +
Sbjct: 246 NNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV- 304
Query: 286 CSAKLNFVEISH---NLLIGKLPSCIGSNSLNR-TVVSTW-NCLSG 326
+L +EI H N GK+P + SL R V+ W N SG
Sbjct: 305 --IQLQNLEILHLFSNNFTGKIP--VALTSLPRLQVLQLWSNKFSG 346
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 87.6 bits (217), Expect = 9e-18
Identities = 72/242 (29%), Positives = 111/242 (45%), Gaps = 11/242 (4%)
Query: 93 PKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEV 152
P F LS N ++ +L NL++L L S G +P + L+V
Sbjct: 277 PPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQV 336
Query: 153 LNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-------LQRLVLLEELNLGGN 205
L + SN GEIP + NL + L+ N L G +P+ L +L+L +L G
Sbjct: 337 LQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSN-SLEGE 395
Query: 206 DFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPS 265
PK +++ V L++NS E+PS + DIS+NN G I S + +PS
Sbjct: 396 I--PKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPS 453
Query: 266 ILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325
+ L+LA N+ LP + S +L +++S N G +P +GS S + + N LS
Sbjct: 454 LQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLS 512
Query: 326 GV 327
G
Sbjct: 513 GE 514
|
Length = 968 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 83.0 bits (206), Expect = 1e-17
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 459 IGEGSQGQLYKGFLTDGS-----RVSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G++YKG L V+VK LK + ++ ++ KL H ++V +
Sbjct: 7 LGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKL 66
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
LG C ++ P +++V+E++ G L YL K + L ++ + RG++
Sbjct: 67 LGVCT---EEEP-----LYIVMEYMEGGDLLSYLR--KNRPKLSLSDLLSFALQIARGME 116
Query: 573 FLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+L + +L N L+ + L K+S
Sbjct: 117 YLESK---NFIHRDLAARNCLVGENLVVKIS 144
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 81.4 bits (202), Expect = 4e-17
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGS-----RVSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G++YKG L V+VK LK + ++ ++ KL H ++V +
Sbjct: 7 LGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKL 66
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
LG C ++ P + +V+E++ G L DYL + L ++ + RG++
Sbjct: 67 LGVCT---EEEP-----LMIVMEYMPGGDLLDYLRK-NRPKELSLSDLLSFALQIARGME 117
Query: 573 FLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+L + +L N L+ + L K+S
Sbjct: 118 YLESK---NFIHRDLAARNCLVGENLVVKIS 145
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 78.3 bits (194), Expect = 5e-16
Identities = 69/302 (22%), Positives = 114/302 (37%), Gaps = 84/302 (27%)
Query: 457 NLIGEGSQGQLYKGFLTDGS----RVSVKCLKL----KQRHLPQSLMQHVELLSKLRHRH 508
+GEG+ G++YKG L V+VK LK ++R + ++ ++ KL H +
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEER---KDFLKEARVMKKLGHPN 57
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL------TDWKKKDMLKWPQRMA 562
+V +LG C ++LVLE++ G L DYL +K L ++
Sbjct: 58 VVRLLGVCT--------EEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLS 109
Query: 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS-------GYNIPLPSKKG- 614
I +G+++L + +L N L+ + L K+S Y+ KK
Sbjct: 110 FAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTG 166
Query: 615 ---------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQV----KSTSEV--- 658
ES G + S K DV+ GV+L ++ T S EV
Sbjct: 167 GKLPIRWMAPESLKDGIFTS-------KSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEY 219
Query: 659 --DGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIED 716
G +L P Y D L E+ ++C D RP+ +
Sbjct: 220 LRKGYRL-------PKPE-------------YCPDELY---ELMLSCWQLDPEDRPTFSE 256
Query: 717 VL 718
++
Sbjct: 257 LV 258
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 78.3 bits (194), Expect = 5e-16
Identities = 65/283 (22%), Positives = 113/283 (39%), Gaps = 51/283 (18%)
Query: 453 FDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLV 510
++ +GEGS G++Y G V++K +K K + + +++ +++L KL+H ++V
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ ++LV+E+ G L D L KK+ L + +
Sbjct: 61 RLYDVFE--------DEDKLYLVMEYCEGGDLFDLL---KKRGRLSEDEARFYLRQILSA 109
Query: 571 VQFLHTGVAPGIFGNN-----LKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQYVS 625
+++LH LK ENILLD+ KL+ + + +++ +V
Sbjct: 110 LEYLH--------SKGIVHRDLKPENILLDEDGHVKLADFGL---ARQLDPGEKLTTFVG 158
Query: 626 ----------NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675
G G D++ LGVIL +++TGK + L + P
Sbjct: 159 TPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQ--LLELFKKIGKPKPPF 216
Query: 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
E D S A D +R L KD KR + E+ L
Sbjct: 217 PPPEWDISPE---AKDLIR-------KLLVKDPEKRLTAEEAL 249
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 78.0 bits (193), Expect = 5e-16
Identities = 70/284 (24%), Positives = 115/284 (40%), Gaps = 56/284 (19%)
Query: 457 NLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQ--SLMQHVELLSKLRHRHLVSIL 513
L+G GS G +Y D G ++VK ++L + +L + + +LS L+H ++V
Sbjct: 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR---- 569
G ++ N + LE++S GSL L KK L +I TR
Sbjct: 66 GSERDEEKNTLN------IFLEYVSGGSLSSLL---KKFGKL----PEPVIRKYTRQILE 112
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY----NIPLPSKKGLESPLRG--QY 623
G+ +LH + GI ++K NIL+D KL+ + + +RG +
Sbjct: 113 GLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYW 169
Query: 624 ----VSNQPGDGAKEDVYQLGVILLQVITGKQV-----KSTSEVDGLKLQLETCLAEAPS 674
V G D++ LG ++++ TGK + + K+ E P
Sbjct: 170 MAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAAL--YKIGSSGEPPEIPE 227
Query: 675 KLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
L E A D LR CL +D KRP+ +++L
Sbjct: 228 HLSEE---------AKDFLRK-------CLRRDPKKRPTADELL 255
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 73.7 bits (182), Expect = 2e-14
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 29/156 (18%)
Query: 459 IGEGSQGQLYKGFLTDGS-----RVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G++YKG L +V+VK LK + ++ ++ KL H ++V +
Sbjct: 7 LGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRL 66
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
LG C Q P +++V E++ G L D+L K + L + + + +G++
Sbjct: 67 LGVCT---QGEP-----LYIVTEYMPGGDLLDFLR--KHGEKLTLKDLLQMALQIAKGME 116
Query: 573 FLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
+L + N L N L+ + L K+S
Sbjct: 117 YLES--------KNFVHRDLAARNCLVTENLVVKIS 144
|
Length = 258 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 70.0 bits (172), Expect = 3e-13
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 23/153 (15%)
Query: 457 NLIGEGSQGQLYKGF-LTDGSRVSVKCLKL---KQRHLPQSLMQHVELLSKLRHRHLVSI 512
+LIG G+ G +YKG L G V++K + L K+ L +S+MQ ++LL L+H ++V
Sbjct: 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEAL-KSIMQEIDLLKNLKHPNIV-- 62
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRG 570
Y T +++++LE+ NGSLR + KK P+ + + +G
Sbjct: 63 ------KYIGSIETSDSLYIILEYAENGSLRQII---KKFGPF--PESLVAVYVYQVLQG 111
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ +LH G+ ++K NIL K KL+
Sbjct: 112 LAYLHE---QGVIHRDIKAANILTTKDGVVKLA 141
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 1e-11
Identities = 56/247 (22%), Positives = 96/247 (38%), Gaps = 20/247 (8%)
Query: 73 TNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLV 132
+ S ++ L N + + + L +L+NL L L
Sbjct: 76 SPSGISSLDGSENLLNL-----------LPLPSLDLNLNRLRSNISELLELTNLTSLDLD 124
Query: 133 SLGLWGPLPSKINRFWS-LEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDL 191
+ + +P I S L+ L++S N +P + +L NLK++ L+ N L+ L
Sbjct: 125 NNNIT-DIPPLIGLLKSNLKELDLSDN-KIESLPSPLRNLPNLKNLDLSFNDLSDLPKLL 182
Query: 192 QRLVLLEELNLGGNDFG--PKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISS 249
L L L+L GN P L + + L NNS+ + S L N L ++S+
Sbjct: 183 SNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIE-LLSSLSNLKNLSGLELSN 241
Query: 250 NNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIG 309
N + +L ++ L+L+ NQ+S + L +++S N L LP
Sbjct: 242 NKLEDLP-ESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIAL 298
Query: 310 SNSLNRT 316
L
Sbjct: 299 LLLLLEL 305
|
Length = 394 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 2e-11
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 129 LSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSV 188
L L + GL G +P+ I++ L+ +N+S N I G IP + S+ +L+ + L+ N NGS+
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 189 PD-LQRLVLLEELNLGGNDFGPKFPS 213
P+ L +L L LNL GN + P+
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPA 508
|
Length = 623 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 4e-11
Identities = 64/276 (23%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 458 LIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IG+G G + G G +V+VKCLK Q+ + +++ LRH +LV +LG +
Sbjct: 13 TIGKGEFGDVMLG-DYRGQKVAVKCLKDDSTAA-QAFLAEASVMTTLRHPNLVQLLGVVL 70
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
G+ +++V E+++ GSL DYL + + ++ Q++ + G+++L
Sbjct: 71 --------QGNPLYIVTEYMAKGSLVDYLRS-RGRAVITLAQQLGFALDVCEGMEYLE-- 119
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLES-----------PLRGQYVSN 626
+L N+L+ + L AK+S + + + +G +S LR + S
Sbjct: 120 -EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFST 178
Query: 627 QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRG 686
K DV+ G++L ++ S V ++ L+ + R EA P
Sbjct: 179 ------KSDVWSFGILLWEIY------SFGRVPYPRIPLKDVVPHVEKGYRMEA-PEGCP 225
Query: 687 TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
Y ++ +C D AKRP+ + + L
Sbjct: 226 PEVYKVMK-------DCWELDPAKRPTFKQLREQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 4e-11
Identities = 63/288 (21%), Positives = 122/288 (42%), Gaps = 55/288 (19%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKL----------KQRHLPQSLMQHVELLSKLRH 506
LIG+G+ G++Y +T G ++VK ++L +Q+ + ++L +E L L H
Sbjct: 8 LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK--KDMLKWPQRMAII 564
++V LG ++ S + LE++ GS+ L + + + ++++ +
Sbjct: 68 LNIVQYLG-----FETTEEYLS---IFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVL- 118
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLES----PLR 620
G+ +LH+ GI +LK +N+L+D K+S + I S ++ ++
Sbjct: 119 ----EGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQ 171
Query: 621 GQYV--------SNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDG--LKLQLETCLA 670
G S G AK D++ LG ++L++ G++ S E KL +
Sbjct: 172 GSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAP 231
Query: 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
P + P A D L C + + RP+ ++L
Sbjct: 232 PIPPDVSMNLSPV-----ALDFLN-------ACFTINPDNRPTARELL 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 64.4 bits (155), Expect = 7e-11
Identities = 62/288 (21%), Positives = 112/288 (38%), Gaps = 36/288 (12%)
Query: 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRH 508
++ +GEGS G++Y D V++K L K + + ++ +++L+ L H
Sbjct: 1 SYRILRKLGEGSFGEVYLA--RDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
I+ D +++LV+E++ GSL D L +K L + + I+
Sbjct: 59 -------NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQIL 111
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALT---------AKLSGYNIPLPSKKGLESPL 619
+++LH+ GI ++K ENILLD+ AKL S L S
Sbjct: 112 SALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTS 168
Query: 620 RG--QYVS-------NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA 670
G Y++ + + D++ LG+ L +++TG + Q +
Sbjct: 169 VGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228
Query: 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
E P+ A + ++ L+KD R S L
Sbjct: 229 ELPTPSLASPLSPSNPELISKAAS---DLLKKLLAKDPKNRLSSSSDL 273
|
Length = 384 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 7e-11
Identities = 67/276 (24%), Positives = 117/276 (42%), Gaps = 38/276 (13%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVS 511
F+ IG+G G++YK G V++K +KL+ + + ++ +++L K +H ++V
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
G +Y +++V+E S GSL+D L + L Q + +G+
Sbjct: 62 YYG----SYLKK----DELWIVMEFCSGGSLKDLLKSTNQT--LTESQIAYVCKELLKGL 111
Query: 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLESPLRGQY-----V 624
++LH + GI ++K NILL KL G + L K + + Y V
Sbjct: 112 EYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEV 168
Query: 625 SNQPGDGAKEDVYQLGVILLQVITGK--QVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682
N K D++ LG+ +++ GK + +K + P LR +P
Sbjct: 169 INGKPYDYKADIWSLGITAIELAEGKPPYSELPP----MKALFKIATNGPP-GLR---NP 220
Query: 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
D L+ CL K+ KRP+ E +L
Sbjct: 221 EKWSDEFKDFLK-------KCLQKNPEKRPTAEQLL 249
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 1e-10
Identities = 64/294 (21%), Positives = 125/294 (42%), Gaps = 70/294 (23%)
Query: 454 DPTNL------IGEGSQGQLYKGFLT-DGSRVSVKCLKL-KQRHLPQSLMQHVELLSKLR 505
DP L IGEG+ G++YK G V++K ++L KQ + ++ + ++ +
Sbjct: 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQN--KELIINEILIMKDCK 73
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
H ++V L G +++V+E++ GSL D + M + ++A +
Sbjct: 74 HPNIVDYYD-SYLV-------GDELWVVMEYMDGGSLTD-IITQNFVRMNE--PQIAYVC 122
Query: 566 GAT-RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLESPLRG- 621
+G+++LH+ + ++K++NILL K + KL+ G+ L +K + + G
Sbjct: 123 REVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGT 179
Query: 622 ------QYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP-- 673
+ + + K D++ LG++ +++ G E P
Sbjct: 180 PYWMAPEVIKRKDYG-PKVDIWSLGIMCIEMAEG---------------------EPPYL 217
Query: 674 --SKLRA------EADPSVRGTYAYDS-LRTTVEITINCLSKDAAKRPSIEDVL 718
LRA + P ++ + + + CL KD KRPS E++L
Sbjct: 218 REPPLRALFLITTKGIPPLKNPEKWSPEFKDFLN---KCLVKDPEKRPSAEELL 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 2e-10
Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 63/279 (22%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 14 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 68
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 69 VVSEEP-----IYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 120
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNIP-------LPSKKGLESPLR---------GQ 622
+L+ NIL+ + L K++ + + +++G + P++ G+
Sbjct: 121 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 179
Query: 623 YVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKL-QLE-----TCLAEAPSKL 676
+ K DV+ G++L ++ T +V V+ L Q+E C E P L
Sbjct: 180 FT-------IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL 232
Query: 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIE 715
++ C K+ +RP+ E
Sbjct: 233 H--------------------DLMCQCWRKEPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 3e-10
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 40/279 (14%)
Query: 452 NFDPTNLIGEGSQGQ--LYKGFLTDGSRVSVKCLKLKQRHLPQS--LMQHVELLSKLRHR 507
++ P ++G+G+ G+ LY+ D S V K + L + + + + +LS L+H
Sbjct: 1 HYIPIRVLGKGAFGEATLYRR-TEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHP 59
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++++ H + +T+ + +E+ + G+L D + +K + + + +
Sbjct: 60 NIIAYYNHFM--------DDNTLLIEMEYANGGTLYDKIVR-QKGQLFEEEMVLWYLFQI 110
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP--LPSKKGLESPLRGQ--Y 623
V ++H GI ++KT NI L KA KL + I L S+ + + G Y
Sbjct: 111 VSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYY 167
Query: 624 VSNQPGDGA----KEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679
+S + G K D++ LG +L +++T +K T + L K+
Sbjct: 168 MSPELCQGVKYNFKSDIWALGCVLYELLT---LKRTFDATNP---LNLV-----VKIVQG 216
Query: 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
V Y+ + L + V + L +D KRP+ ++VL
Sbjct: 217 NYTPVVSVYSSE-LISLVH---SLLQQDPEKRPTADEVL 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 3e-10
Identities = 75/282 (26%), Positives = 113/282 (40%), Gaps = 56/282 (19%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKL------KQRHLPQSLMQHVELLSKLRHRHLV 510
L+G GS G +Y+G L DG +VK + L Q + Q L Q + LLSKL+H ++V
Sbjct: 7 LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQ-LEQEIALLSKLQHPNIV 65
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR- 569
LG +++ LE + GSL L KK P I TR
Sbjct: 66 QYLG--------TEREEDNLYIFLELVPGGSLAKLL---KKYGSFPEPV----IRLYTRQ 110
Query: 570 ---GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY--------NIPLPSKKGLESP 618
G+++LH ++K NIL+D KL+ + S KG
Sbjct: 111 ILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYW 167
Query: 619 LRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDG--LKLQLETCLAEAPSKL 676
+ + ++ Q G G D++ LG +L++ TGK S E K+ L P L
Sbjct: 168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHL 227
Query: 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
EA + CL +D + RP+ ++L
Sbjct: 228 SDEAKDFIL----------------KCLQRDPSLRPTAAELL 253
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 60.6 bits (148), Expect = 5e-10
Identities = 67/295 (22%), Positives = 116/295 (39%), Gaps = 70/295 (23%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKL-----KQRHLPQSLMQHVELLSKLR 505
++ IG+GS G++Y +DG +K + L K+R + + V++L KL
Sbjct: 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKER---EDALNEVKILKKLN 57
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAII 564
H + I+ Y + + +V+E+ G L + KK+ Q +
Sbjct: 58 HPN--------IIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWF 109
Query: 565 IGATRGVQFLHTGVAPGIFGNN-----LKTENILLDKALTAKLSGYNIPLPSKKGLES-- 617
+ +++LH+ +K +NI L KL + I SK L S
Sbjct: 110 VQLCLALKYLHS--------RKILHRDIKPQNIFLTSNGLVKLGDFGI---SKV-LSSTV 157
Query: 618 ---------PLRGQYVS-----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKL 663
P Y+S N+P + K D++ LG +L ++ T K + L L
Sbjct: 158 DLAKTVVGTPY---YLSPELCQNKPYN-YKSDIWSLGCVLYELCTLKHPFEGENLLELAL 213
Query: 664 QLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
++ L+ + P + Y+ + LR V L KD +RPSI +L
Sbjct: 214 KI----------LKGQYPP-IPSQYSSE-LRNLVSS---LLQKDPEERPSIAQIL 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 4e-09
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 42/213 (19%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G++++G + RV++K LK Q + V+ L +LRH+HL+S+ C
Sbjct: 14 LGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVC-- 71
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG----ATRGVQFL 574
+ G V+++ E + GSL +L + + +A +I G+ +L
Sbjct: 72 ------SVGEPVYIITELMEKGSLLAFLRSPEGQV-----LPVASLIDMACQVAEGMAYL 120
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGY--------NIPLPSKKGL-------ESPL 619
+L NIL+ + L K++ + ++ L S K + E+
Sbjct: 121 E---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAAS 177
Query: 620 RGQYVSNQPGDGAKEDVYQLGVILLQVITGKQV 652
G + + K DV+ G++L ++ T QV
Sbjct: 178 HGTFST-------KSDVWSFGILLYEMFTYGQV 203
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 8e-09
Identities = 61/281 (21%), Positives = 112/281 (39%), Gaps = 46/281 (16%)
Query: 457 NLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSIL 513
N IG G+ G++Y L G ++VK ++++ + + +++L L+H +LV
Sbjct: 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
G + H V++ +E+ S G+L + L + D + + + G+ +
Sbjct: 66 G-----VEVHREK---VYIFMEYCSGGTLEELLEHGRILDE-HVIRVYTLQL--LEGLAY 114
Query: 574 LHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQY---------- 623
LH+ GI ++K NI LD KL + + K +
Sbjct: 115 LHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMA 171
Query: 624 ---VSNQP--GDGAKEDVYQLGVILLQVITGKQVKSTSEVDG-LKLQLETCLAEAPSKLR 677
++ G G D++ LG ++L++ TGK + SE+D ++ P +
Sbjct: 172 PEVITGGKGKGHGRAADIWSLGCVVLEMATGK--RPWSELDNEFQIMFHVGAGHKPP-IP 228
Query: 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
S G D L CL D KRP+ ++L
Sbjct: 229 DSLQLSPEG---KDFLD-------RCLESDPKKRPTASELL 259
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 1e-08
Identities = 60/282 (21%), Positives = 119/282 (42%), Gaps = 69/282 (24%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G ++V+VK LK P+S ++ +++ KLRH LV +
Sbjct: 14 LGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS-PESFLEEAQIMKKLRHDKLVQLYA---- 68
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L D + + LK P + + G+ ++
Sbjct: 69 VVSEEP-----IYIVTEYMSKGSLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAYIER-- 120
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNIP-------LPSKKGLESPLR---------GQ 622
+L++ NIL+ L K++ + + +++G + P++ G+
Sbjct: 121 -MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 179
Query: 623 YVSNQPGDGAKEDVYQLGVILLQVITGKQVK----STSEV-----DGLKLQLETCLAEAP 673
+ K DV+ G++L +++T +V + EV G ++ C + P
Sbjct: 180 FT-------IKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMP---CPQDCP 229
Query: 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIE 715
L E+ + C KD +RP+ E
Sbjct: 230 ISLH--------------------ELMLQCWKKDPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 1e-08
Identities = 64/288 (22%), Positives = 111/288 (38%), Gaps = 54/288 (18%)
Query: 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ-------RHLPQSLMQHVELLSKL 504
+F+ N IG+GS G ++K RV +KQ R + + +L+KL
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKADKRVYA----MKQIDLSKMNRREREEAIDEARVLAKL 56
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM---LKWPQRM 561
+ I+ Y + + +V+E+ NG L L + + + W
Sbjct: 57 DSSY--------IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVW---- 104
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP--LPSKKGLESPL 619
I G+ LH+ I ++K+ N+ LD K+ + L + +
Sbjct: 105 RFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTI 161
Query: 620 RGQ--YVS-----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672
G Y+S ++P + K DV+ LGV+L + TGK + L L++
Sbjct: 162 VGTPYYLSPELCEDKPYN-EKSDVWALGVVLYECCTGKHPFDANNQGALILKI------- 213
Query: 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720
+R P V Y+ ++ CL+KD +RP +L N
Sbjct: 214 ---IRGVFPP-VSQMYSQQ----LAQLIDQCLTKDYRQRPDTFQLLRN 253
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 1e-08
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 51/235 (21%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHV----ELLSKL- 504
++F +IGEGS + ++K L K++ + + +++V E+L++L
Sbjct: 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILD-KRQLIKEKKVKYVKIEKEVLTRLN 59
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++ + T+QD N ++ VLE+ NG L Y+ + D A I
Sbjct: 60 GHPGIIKLYY----TFQDEEN----LYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEI 111
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL---------SGYNIPLPSKKGL 615
+ A +++LH + GI +LK ENILLDK + K+ + P +K
Sbjct: 112 LLA---LEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDA 165
Query: 616 ESPLRG---------------QYVS-----NQPGDGAKEDVYQLGVILLQVITGK 650
+ +YVS +P G D++ LG I+ Q++TGK
Sbjct: 166 TNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPA-GKSSDLWALGCIIYQMLTGK 219
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 2e-08
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 43/211 (20%)
Query: 458 LIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSL----MQHVELLSKLRHRHLVSIL 513
L+G+G+ G+++KG L D + V+VK K LPQ L + +L + H ++V ++
Sbjct: 2 LLGKGNFGEVFKGTLKDKTPVAVKTCK---EDLPQELKIKFLSEARILKQYDHPNIVKLI 58
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
G C Q P +++V+E + G +L KKKD LK Q + + A G+ +
Sbjct: 59 GVCT---QRQP-----IYIVMELVPGGDFLSFLR--KKKDELKTKQLVKFALDAAAGMAY 108
Query: 574 LHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLES-------PLR------ 620
L + +L N L+ + K+S + + G+ S P++
Sbjct: 109 LES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEA 165
Query: 621 ---GQYVSNQPGDGAKEDVYQLGVILLQVIT 648
G+Y S + DV+ G++L + +
Sbjct: 166 LNYGRYSS-------ESDVWSYGILLWETFS 189
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 2e-08
Identities = 58/260 (22%), Positives = 113/260 (43%), Gaps = 49/260 (18%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G ++V++K LK +P++ +Q +++ KLRH LV +
Sbjct: 14 LGQGCFGEVWMGTWNGTTKVAIKTLK-PGTMMPEAFLQEAQIMKKLRHDKLVPLYA---- 68
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E + GSL D+L + K LK PQ + + G+ ++
Sbjct: 69 VVSEEP-----IYIVTEFMGKGSLLDFLKEGDGK-YLKLPQLVDMAAQIADGMAYIER-- 120
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNIP-------LPSKKGLESPLR---------GQ 622
+L+ NIL+ L K++ + + +++G + P++ G+
Sbjct: 121 -MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 179
Query: 623 YVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKL-QLE-----TCLAEAPSKL 676
+ K DV+ G++L +++T +V V+ L Q+E C P L
Sbjct: 180 FT-------IKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESL 232
Query: 677 RA------EADPSVRGTYAY 690
+ DP R T+ Y
Sbjct: 233 HELMKLCWKKDPDERPTFEY 252
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 59/278 (21%), Positives = 114/278 (41%), Gaps = 42/278 (15%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP-QSLMQHVELLSKLRHRHLVSILGHC 516
IG G+ +Y L + +V++K + L++ L + V+ +S+ H ++V +
Sbjct: 9 IGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKY--YT 66
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
G ++LV+ ++S GSL D + + L ++ +G+++LH+
Sbjct: 67 SFV------VGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS 120
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQY------------- 623
G ++K NILL + + K++ + + G + + +
Sbjct: 121 N---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEV 177
Query: 624 VSNQPGDGAKEDVYQLGVILLQVITGKQVKST---SEVDGLKLQLETCLAEAPSKLRAEA 680
+ G K D++ G+ +++ TG S +V L LQ P L A
Sbjct: 178 MEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQ------NDPPSLETGA 231
Query: 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
D S R + + CL KD +KRP+ E++L
Sbjct: 232 DYKKYSK----SFRKMISL---CLQKDPSKRPTAEELL 262
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 55.3 bits (133), Expect = 3e-08
Identities = 48/221 (21%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IGEG G + +G T G +V+VK +K Q+ ++ +++KL H++LV +LG ++
Sbjct: 14 IGEGEFGAVLQGEYT-GQKVAVKNIKCDVT--AQAFLEETAVMTKLHHKNLVRLLG--VI 68
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ +++V+E +S G+L ++L + + ++ Q + + G+++L +
Sbjct: 69 LHNG-------LYIVMELMSKGNLVNFLRT-RGRALVSVIQLLQFSLDVAEGMEYLES-- 118
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPL------------RGQYVSN 626
+ +L NIL+ + AK+S + + G+++ ++ S
Sbjct: 119 -KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSS- 176
Query: 627 QPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLE 666
K DV+ GV+L +V + G+ + +K +E
Sbjct: 177 ------KSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE 211
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 4e-08
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 458 LIGEGSQGQLYKGFLTDGSRVSVK-CLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
IG+G+ G +YKG L + V+VK C L + +Q E+L + H ++V ++G C
Sbjct: 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
+ Q P +++V+E + GSL +L KKK+ L + + + + A G+++L
Sbjct: 62 V---QKQP-----IYIVMELVPGGSLLTFLR--KKKNRLTVKKLLQMSLDAAAGMEYL 109
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 5e-08
Identities = 61/280 (21%), Positives = 112/280 (40%), Gaps = 53/280 (18%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G + G G++V+VKC+K Q+ + ++++LRH +LV +LG +
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIV- 69
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+++V E+++ GSL DYL + + +L + + +++L
Sbjct: 70 ------EEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLE--- 119
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI-----------PLPSKKGLESPLRGQYVSNQ 627
A +L N+L+ + AK+S + + LP K LR + S
Sbjct: 120 ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFS-- 177
Query: 628 PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGT 687
K DV+ G++L ++ + +V P + P V
Sbjct: 178 ----TKSDVWSFGILLWEIYSFGRVPY------------------PRIPLKDVVPRVEKG 215
Query: 688 YAYDS----LRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723
Y D+ ++ C DAA RPS + L++
Sbjct: 216 YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 72/292 (24%), Positives = 125/292 (42%), Gaps = 67/292 (22%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKL---------KQRHLPQSLMQHVELLSKLRHR 507
LIG GS G +Y G + G ++VK ++L ++R + +L + + LL +L+H
Sbjct: 7 LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V LG + DH N + LE++ GS+ L ++ + +
Sbjct: 67 NIVQYLGSSL--DADHLN------IFLEYVPGGSVAALLNNYGA---FEETLVRNFVRQI 115
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP-------LPSKKGLESP-L 619
+G+ +LH GI ++K NIL+D K+S + I L +K P L
Sbjct: 116 LKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSL 172
Query: 620 RGQY------VSNQPGDGAKEDVYQLGVILLQVITGK-------QVKSTSEVDGLKLQLE 666
+G V Q K D++ LG ++++++TGK Q+++ ++
Sbjct: 173 QGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGEN----- 227
Query: 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
E PS + +EA D L T EI D KRP+ ++L
Sbjct: 228 -ASPEIPSNISSEAI---------DFLEKTFEI-------DHNKRPTAAELL 262
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 1e-07
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKLR---H 506
++ IGEG+ G +YK L G V++K ++ L + +P S ++ + LL +L H
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEH 60
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD--------WKKKDMLKWP 558
++V +L C + + LV EH+ L YL+ KD+++
Sbjct: 61 PNIVRLLDVC-HGPRTD--RELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMR-- 114
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
Q + RGV FLH+ I +LK +NIL+ K+
Sbjct: 115 QLL-------RGVDFLHSHR---IVHRDLKPQNILVTSDGQVKI 148
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 31/165 (18%)
Query: 459 IGEGSQGQLYKGFLT----DGSRVSVKCLKLKQRHLP---QSLMQHVELLSKLRHRHLVS 511
+GEG+ G++YKG LT S SV LK+ P Q Q EL+S L+H ++V
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL-------------TDWKKKDMLKWP 558
+LG C ++ P ++ E++++G L ++L D K L
Sbjct: 73 LLGVCT---KEQPTC-----MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCS 124
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ I I G+++L + +L N L+ + LT K+S
Sbjct: 125 DFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKIS 166
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 52.8 bits (126), Expect = 3e-07
Identities = 44/203 (21%), Positives = 102/203 (50%), Gaps = 28/203 (13%)
Query: 459 IGEGSQGQLYKGFLTD---GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
IG+G+ G ++ D G V++K + L+++ + ++ + ++ +L++ ++V+ L
Sbjct: 27 IGQGASGTVFTA--IDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFL-- 82
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
D G +F+V+E+++ GSL D +T+ + Q A+ + ++FLH
Sbjct: 83 ------DSFLVGDELFVVMEYLAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLH 132
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLESPLRGQ------YVSNQ 627
A + ++K++N+LL + KL+ G+ + ++ S + G V +
Sbjct: 133 ---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR 189
Query: 628 PGDGAKEDVYQLGVILLQVITGK 650
G K D++ LG++ ++++ G+
Sbjct: 190 KAYGPKVDIWSLGIMAIEMVEGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 3e-07
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 457 NLIGEGSQGQLYKGFLTD-------GSRVSVKCLKLKQRHLPQS-LMQHVELLSKLRHRH 508
N +G G+ G++Y+G TD RV+VK L+ + ++ L+S H +
Sbjct: 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+V +LG C+L ++++E + G L YL D +
Sbjct: 61 IVKLLGVCLLN--------EPQYIIMELMEGGDLLSYLRDARV 95
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 4e-07
Identities = 63/299 (21%), Positives = 114/299 (38%), Gaps = 62/299 (20%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSK 503
E E + ++G+G+ G +Y L+ R+++K + + Q L + + L S
Sbjct: 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSY 61
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL-TDW----KKKDMLKWP 558
L+HR++V LG + +E + GSL L + W + + +
Sbjct: 62 LKHRNIVQYLGSDS--------ENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFY 113
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL----------DKALTAKLSGYNIP 608
+ + G+++LH I ++K +N+L+ D + +L+G N
Sbjct: 114 TKQIL-----EGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN-- 163
Query: 609 LPSKKGLESPLRGQYVS------NQPGDGAKEDVYQLGVILLQVITGK---QVKSTSEVD 659
P + L QY++ G GA D++ LG ++++ TGK +
Sbjct: 164 -PCTETFTGTL--QYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA 220
Query: 660 GLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
K+ + E P L AEA + C D KR S D+L
Sbjct: 221 MFKVGMFKIHPEIPESLSAEAK----------------NFILRCFEPDPDKRASAHDLL 263
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 6e-07
Identities = 42/200 (21%), Positives = 95/200 (47%), Gaps = 25/200 (12%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V++K LK + P++ + L+ +L+H LV + + ++
Sbjct: 14 LGAGQFGEVWMGYYNGHTKVAIKSLK-QGSMSPEAFLAEANLMKQLQHPRLVRL--YAVV 70
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYL-TDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
T + ++++ E++ NGSL D+L T K L + + + G+ F+
Sbjct: 71 TQE-------PIYIITEYMENGSLVDFLKTPEGIK--LTINKLIDMAAQIAEGMAFIE-- 119
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNIP-------LPSKKGLESPLR--GQYVSNQP 628
+L+ NIL+ + L K++ + + +++G + P++ N
Sbjct: 120 -RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 178
Query: 629 GDGAKEDVYQLGVILLQVIT 648
K DV+ G++L +++T
Sbjct: 179 TFTIKSDVWSFGILLTEIVT 198
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 6e-07
Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 457 NLIGEGSQGQLYKG---FLTD--GSRVSVKCLKLKQRHLPQS-LMQHVELLSKLRHRHLV 510
+GEG G++ L D G +V+VK L +S + +E+L L H ++V
Sbjct: 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
G C G ++ L++E++ +GSLRDYL + +D + + + +G
Sbjct: 70 KYKGVC------EKPGGRSLRLIMEYLPSGSLRDYLQ--RHRDQINLKRLLLFSSQICKG 121
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP--LPSKKGLESPLRGQYVSNQP 628
+ +L + +L NIL++ K+S + + LP K Y +P
Sbjct: 122 MDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDY-------YYVKEP 171
Query: 629 GD----------------GAKEDVYQLGVILLQVIT 648
G+ + DV+ GV L ++ T
Sbjct: 172 GESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 6e-07
Identities = 43/201 (21%), Positives = 101/201 (50%), Gaps = 24/201 (11%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IG+G+ G +Y + G V+++ + L+Q+ + ++ + ++ + ++ ++V+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN------ 81
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
Y D G +++V+E+++ GSL D +T+ + Q A+ + ++FLH+
Sbjct: 82 --YLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 578 VAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLESPLRGQ------YVSNQPG 629
+ ++K++NILL + KL+ G+ + ++ S + G V +
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192
Query: 630 DGAKEDVYQLGVILLQVITGK 650
G K D++ LG++ +++I G+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGE 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 6e-07
Identities = 65/281 (23%), Positives = 113/281 (40%), Gaps = 44/281 (15%)
Query: 452 NFDPTNLIGEGSQGQLYK-GFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH-RHL 509
+F +G+GS G +YK L+D ++K + L M E + R L
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDL-------GSMSQKEREDAVNEIRIL 53
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM--AIIIGA 567
S+ I++Y++ G+ + +V+E+ G L ++ KKK L P++ I I
Sbjct: 54 ASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKL-IPEQEIWRIFIQL 112
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQ--YVS 625
RG+Q LH I +LK+ NILL K+ I KK + G Y++
Sbjct: 113 LRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMA 169
Query: 626 -----NQPGDGAKEDVYQLGVILLQVITGK---QVKSTSEVDGLKLQLETCLAEAPSKLR 677
+P K D++ LG +L ++ T + +S + L+ + R
Sbjct: 170 PEVWKGRPYS-YKSDIWSLGCLLYEMATFAPPFEARSMQD-----LRYKVQ--------R 215
Query: 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ P + Y+ D + L RP+ + +L
Sbjct: 216 GKYPP-IPPIYSQD----LQNFIRSMLQVKPKLRPNCDKIL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 51.3 bits (122), Expect = 7e-07
Identities = 43/201 (21%), Positives = 100/201 (49%), Gaps = 24/201 (11%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IG+G+ G +Y + G V++K + L+Q+ + ++ + ++ + ++ ++V+
Sbjct: 27 IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVN------ 80
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
Y D G +++V+E+++ GSL D +T+ + Q A+ + + FLH+
Sbjct: 81 --YLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSN 134
Query: 578 VAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLESPLRGQ------YVSNQPG 629
+ ++K++NILL + KL+ G+ + ++ S + G V +
Sbjct: 135 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 191
Query: 630 DGAKEDVYQLGVILLQVITGK 650
G K D++ LG++ ++++ G+
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 8e-07
Identities = 48/233 (20%), Positives = 113/233 (48%), Gaps = 34/233 (14%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ + ++V+VK LK + Q+ ++ L+ L+H LV + + ++
Sbjct: 14 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRL--YAVV 70
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYL-TDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
T ++ ++++ E+++ GSL D+L +D K +L P+ + G+ ++
Sbjct: 71 TKEE------PIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIER- 121
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNIP-------LPSKKGLESPLR--GQYVSNQP 628
+L+ N+L+ ++L K++ + + +++G + P++ N
Sbjct: 122 --KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 179
Query: 629 GDGAKEDVYQLGVILLQVITGKQV----KSTSEV-----DGLKL-QLETCLAE 671
K DV+ G++L +++T ++ S S+V G ++ ++E C E
Sbjct: 180 SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDE 232
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 1e-06
Identities = 46/208 (22%), Positives = 99/208 (47%), Gaps = 38/208 (18%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IG+G+ G +Y + G V++K + L+Q+ + ++ + ++ + +H ++V+
Sbjct: 27 IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVN------ 80
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
Y D G +++V+E+++ GSL D +T+ + Q A+ + ++FLH
Sbjct: 81 --YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCRECLQALEFLH-- 132
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNI-----PLPSKKGL----------ESPLRGQ 622
+ + ++K++NILL + KL+ + P SK+ E R
Sbjct: 133 -SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 191
Query: 623 YVSNQPGDGAKEDVYQLGVILLQVITGK 650
Y G K D++ LG++ ++++ G+
Sbjct: 192 Y-------GPKVDIWSLGIMAIEMVEGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 2e-06
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 15/95 (15%)
Query: 459 IGEGSQGQLYKGFLT------DGSRVSVKCLK-LKQRHLPQSLMQHVELLSKLRHRHLVS 511
+GEG+ G+++ G D V+VK LK + + ELL+ +H ++V
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
G C G +V E++ +G L +L
Sbjct: 73 FYGVCT--------EGDPPIMVFEYMEHGDLNKFL 99
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 5e-06
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 19/163 (11%)
Query: 448 EATNNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKL-R 505
+ T F+ +IGEG+ G++YK G V++K + + + + + + +L K
Sbjct: 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE-EEEIKEEYNILRKYSN 61
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--- 562
H ++ + G ++ P ++LV+E GS+ D + K + K +R+
Sbjct: 62 HPNIATFYG--AFIKKNPPGNDDQLWLVMELCGGGSVTDLV-----KGLRKKGKRLKEEW 114
Query: 563 ---IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
I+ RG+ +LH + ++K +NILL K KL
Sbjct: 115 IAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKL 154
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 5e-06
Identities = 66/294 (22%), Positives = 121/294 (41%), Gaps = 65/294 (22%)
Query: 458 LIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQ---HVELLSKLRHRHLVSILG 514
LI E Q +YKG + V ++ K + + ++ L ++ +++ I G
Sbjct: 27 LIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
I D P + L+LE+ + G LR+ L K+KD L + ++ + I +G+ L
Sbjct: 86 FIIDIVDDLPR----LSLILEYCTRGYLREVLD--KEKD-LSFKTKLDMAIDCCKGLYNL 138
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPL--RGQYVSNQPGD-- 630
+ NL + + L+ + K+ + + +K L SP ++
Sbjct: 139 YKYT--NKPYKNLTSVSFLVTENYKLKIICHGL----EKILSSPPFKNVNFMVYFSYKML 192
Query: 631 -------GAKEDVYQLGVILLQVITGK---QVKSTSEV--------DGLKLQLETCLAEA 672
K+D+Y LGV+L ++ TGK + +T E+ + LKL L+
Sbjct: 193 NDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLD-----C 247
Query: 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL-QYSI 725
P +++ I C S D+ KRP+I+++L+NL Y
Sbjct: 248 PLEIKC--------------------IVEACTSHDSIKRPNIKEILYNLSLYKF 281
|
Length = 283 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 5e-06
Identities = 46/202 (22%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 459 IGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IGEGS G + G +V+VK + L+++ + L V ++ H ++V + +
Sbjct: 30 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL 89
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
+ G +++V+E + G+L D +T + + Q + + R + +LH
Sbjct: 90 V--------GDELWVVMEFLEGGALTDIVTHTRMNE----EQIATVCLSVLRALSYLHN- 136
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNI------PLPSKKGL-ESP--LRGQYVSNQP 628
G+ ++K+++ILL KLS + +P +K L +P + + +S P
Sbjct: 137 --QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLP 194
Query: 629 GDGAKEDVYQLGVILLQVITGK 650
G + D++ LG++++++I G+
Sbjct: 195 Y-GTEVDIWSLGIMVIEMIDGE 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 6e-06
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 27/153 (17%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGH 515
IGEG+ GQ+YK G V++K ++++ P + ++ ++LL KLRH ++V +
Sbjct: 7 IGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRL--K 64
Query: 516 CILTYQDHPNTGSTVFLVLEHIS---NGSLRDY---LTDWKKKDMLKWPQRMAIIIGATR 569
I+T ++++V E++ G L T+ + K +K Q +
Sbjct: 65 EIVT----SKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMK--QLL-------E 111
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
G+Q+LH+ GI ++K NIL++ KL
Sbjct: 112 GLQYLHSN---GILHRDIKGSNILINNDGVLKL 141
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 7e-06
Identities = 46/202 (22%), Positives = 101/202 (50%), Gaps = 26/202 (12%)
Query: 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IGEGS G + + + G V+VK + L+++ + L V ++ +H ++V + +
Sbjct: 28 IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
+ G +++V+E + G+L D +T + + Q A+ + + + LH
Sbjct: 88 V--------GDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLKALSVLH-- 133
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGY------NIPLPSKKGL-ESP--LRGQYVSNQP 628
A G+ ++K+++ILL KLS + + +P +K L +P + + +S P
Sbjct: 134 -AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLP 192
Query: 629 GDGAKEDVYQLGVILLQVITGK 650
G + D++ LG+++++++ G+
Sbjct: 193 Y-GPEVDIWSLGIMVIEMVDGE 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 8e-06
Identities = 62/288 (21%), Positives = 109/288 (37%), Gaps = 54/288 (18%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRH 508
++ + ++G+GS G +YK G ++K + + + L++ ++ L +
Sbjct: 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPY 60
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V C Y G + +VLE++ GSL D L KK + P I
Sbjct: 61 VVK----C---YGAFYKEGE-ISIVLEYMDGGSLADLL---KKVGKIPEPVLAYIARQIL 109
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLE------------ 616
+G+ +LHT I ++K N+L++ K++ + I K LE
Sbjct: 110 KGLDYLHTKRH--IIHRDIKPSNLLINSKGEVKIADFGI----SKVLENTLDQCNTFVGT 163
Query: 617 ----SP--LRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA 670
SP ++G+ D++ LG+ LL+ GK ++
Sbjct: 164 VTYMSPERIQGES------YSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD 217
Query: 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
P PS+ R + CL KD KRPS ++L
Sbjct: 218 GPP--------PSLPAEEFSPEFRDFISA---CLQKDPKKRPSAAELL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 1e-05
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282
L N LR IP+ + L+ ++S N+ G I L S+ S+ L+L+ N + ++P
Sbjct: 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPE 484
Query: 283 NISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRT 316
++ L + ++ N L G++P+ +G L+R
Sbjct: 485 SLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRA 518
|
Length = 623 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 43/274 (15%)
Query: 459 IGEGSQGQL-YKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGH 515
+G+GS G++ TDG + +K L L+ R ++ Q +LLS+L+H ++V
Sbjct: 8 VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIV----- 62
Query: 516 CILTYQDHPNTGS-TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
Y++ +++V+ G L L + K K +L Q + + +Q+L
Sbjct: 63 ---AYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGK-LLPENQVVEWFVQIAMALQYL 118
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP--LPSKKGLESPLRG-------QYVS 625
H I +LKT+N+ L + K+ I L ++ + S L G + S
Sbjct: 119 HE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFS 175
Query: 626 NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQL-ETCLAEAPSKLRAEADPSV 684
N+P + K DV+ LG + ++ T K + +++ L ++ E L P E
Sbjct: 176 NKPYN-YKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPE----- 229
Query: 685 RGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
E+ LSK KRPS++ +L
Sbjct: 230 -----------LGELIATMLSKRPEKRPSVKSIL 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 58/279 (20%), Positives = 115/279 (41%), Gaps = 48/279 (17%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G++++G + + V+VK LK P+ + +++ KLRH L+ + C L
Sbjct: 14 LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCTL 72
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+++V E + GSL +YL LK PQ + + G+ +L
Sbjct: 73 --------EEPIYIVTELMKYGSLLEYLQG-GAGRALKLPQLIDMAAQVASGMAYLE--- 120
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNIP-------LPSKKGLESPLR--GQYVSNQPG 629
A +L N+L+ + K++ + + +++G + P++ +
Sbjct: 121 AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNR 180
Query: 630 DGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQ-LET-----CLAEAPSKLRAEADPS 683
K DV+ G++L +++T ++ + LQ ++ C P +L
Sbjct: 181 FSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKEL------- 233
Query: 684 VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
YD I ++C +D RP+ E + W L+
Sbjct: 234 ------YD-------IMLDCWKEDPDDRPTFETLQWKLE 259
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 47.4 bits (112), Expect = 1e-05
Identities = 69/285 (24%), Positives = 117/285 (41%), Gaps = 58/285 (20%)
Query: 458 LIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL-PQS---------LMQHVELLSKLRHR 507
L+G+G+ G++Y + D R L KQ P+S L ++LL L+H
Sbjct: 9 LLGQGAFGRVYLCYDVDTGRE----LAAKQVQFDPESPETSKEVSALECEIQLLKNLQHE 64
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDW---KKKDMLKWPQRMAII 564
+V G C+ +D T+F+ E++ GS++D L + + K+ +++
Sbjct: 65 RIVQYYG-CL---RDRAEKTLTIFM--EYMPGGSVKDQLKAYGALTESVTRKYTRQI--- 115
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP------LPSKKGLESP 618
G+ +LH+ + I ++K NIL D A KL + S G+ S
Sbjct: 116 ---LEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSV 169
Query: 619 LRGQY-----VSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673
Y V + G G K DV+ LG +++++T K + E ++ T
Sbjct: 170 TGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQ 229
Query: 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
PS +A D L C+ +A RPS E++L
Sbjct: 230 L-------PSHISEHARDFLG--------CIFVEARHRPSAEELL 259
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 1e-05
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 35/209 (16%)
Query: 458 LIGEGSQGQLYKGFLTDGSR----VSVKCLKL----KQRHLPQSLMQHVELLSKLRHRHL 509
++G G G+L +G L S+ V++ L+ KQR + + L + H ++
Sbjct: 12 ILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQR---RGFLAEALTLGQFDHSNI 68
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
V + G ++T G+T+ +V E++SNG+L +L K + L Q M ++ G
Sbjct: 69 VRLEG--VIT------RGNTMMIVTEYMSNGALDSFLR--KHEGQLVAGQLMGMLPGLAS 118
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK--GLESPLRGQYVSNQ 627
G+++L G L +L++ L K+SG+ L K + + + G+
Sbjct: 119 GMKYL---SEMGYVHKGLAAHKVLVNSDLVCKISGFR-RLQEDKSEAIYTTMSGKSPVLW 174
Query: 628 PGDGAKE--------DVYQLGVILLQVIT 648
A + DV+ G+++ +V++
Sbjct: 175 AAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 30/169 (17%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLR---H 506
++P IG G+ G +YK G V++K ++++ + LP S ++ V LL +L H
Sbjct: 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDH 61
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDW--------KKKDMLKWP 558
++V ++ C + D + V LV EH+ LR YL KD+++
Sbjct: 62 PNIVRLMDVCATSRTDRE---TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMR-- 115
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
Q + RG+ FLH I +LK ENIL+ KL+ + +
Sbjct: 116 QFL-------RGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGL 154
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 2e-05
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 434 GLPPFRG--FSLEEIEEATNNFDPTNLIGEGSQGQLYK-GFLTDGSRVSVKCLKLKQRHL 490
GL P+ LE + + T+ ++ IG+G+ G++YK DGS +VK L +
Sbjct: 3 GLFPYNSSMLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILD-PISDV 61
Query: 491 PQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDW 549
+ + +L L H ++V G + Y+ G ++LVLE + GS+ + +
Sbjct: 62 DEEIEAEYNILQSLPNHPNVVKFYG---MFYKADKLVGGQLWLVLELCNGGSVTELV--- 115
Query: 550 KKKDMLKWPQRMA------IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
K +L QR+ I+ GA G+Q LH I ++K NILL KL
Sbjct: 116 --KGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLV 170
Query: 604 GYNI 607
+ +
Sbjct: 171 DFGV 174
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 43/280 (15%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLP------QSLMQHVELLSKLRHRHLV 510
++G+G+ G +Y G G ++VK ++L ++ + L + V+LL L+H ++V
Sbjct: 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
LG C+ D +T+ + +E + GS+ L + + + I+ G
Sbjct: 66 QYLGTCL---DD-----NTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQIL---DG 114
Query: 571 VQFLHTG--VAPGIFGNN--LKTENI--LLDKALTAKLSGYNIPLPSKKGLESPLRGQ-- 622
V +LH V I GNN L I L+D +L+ + L+S + G
Sbjct: 115 VAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKS-MHGTPY 173
Query: 623 ----YVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678
V N+ G G K D++ +G + ++ TGK + +D L
Sbjct: 174 WMAPEVINESGYGRKSDIWSIGCTVFEMATGK--PPLASMDRLAAMFYIGAHRGLM---- 227
Query: 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
P + +++ ++ +CL++D +RPS +L
Sbjct: 228 ---PRLPDSFS----AAAIDFVTSCLTRDQHERPSALQLL 260
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 3e-05
Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 46/215 (21%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVK-CLKLKQ----RHLPQSLMQHVELLSKLRHRHLVS 511
L+G G G ++KG + +G + + +K Q R Q + H+ + L H ++V
Sbjct: 14 LLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVR 73
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA-IIIGATRG 570
+LG C G+++ LV + GSL D++ + +D L PQR+ + +G
Sbjct: 74 LLGIC---------PGASLQLVTQLSPLGSLLDHVR--QHRDSLD-PQRLLNWCVQIAKG 121
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP---LPSKK-------------- 613
+ +L + NL NILL +++ + + P K
Sbjct: 122 MYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWM 178
Query: 614 GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT 648
LES L G+Y + DV+ GV + ++++
Sbjct: 179 ALESILFGRYTH-------QSDVWSYGVTVWEMMS 206
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 63/312 (20%), Positives = 115/312 (36%), Gaps = 102/312 (32%)
Query: 456 TNLIGEGSQGQLYKGFLTDGSR----VSVKCLKL----KQRHLPQSLMQHVELLSKLRHR 507
+IG G G++ +G L + V++K LK KQR ++ L++
Sbjct: 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQR---------LDFLTE---- 55
Query: 508 HLVSILGHCILTYQDHPN---------TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
SI+G DHPN V ++ E++ NGSL +L +
Sbjct: 56 --ASIMGQF-----DHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLR--ENDGKFTVG 106
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI--------PLP 610
Q + ++ G G+++L +L NIL++ L K+S + +
Sbjct: 107 QLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY 163
Query: 611 SKKGLESPLR---------GQYVSNQPGDGAKEDVYQLGVILLQVI----------TGKQ 651
+ KG + P+R ++ S DV+ G+++ +V+ + +
Sbjct: 164 TTKGGKIPIRWTAPEAIAYRKFTS-------ASDVWSFGIVMWEVMSYGERPYWDMSNQD 216
Query: 652 VKSTSEVDGLKLQL-ETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAK 710
V E DG +L C PS L ++ ++C KD +
Sbjct: 217 VIKAVE-DGYRLPPPMDC----PSALY--------------------QLMLDCWQKDRNE 251
Query: 711 RPSIEDVLWNLQ 722
RP+ ++ L
Sbjct: 252 RPTFSQIVSTLD 263
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 4e-05
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 459 IGEGSQGQLYKGF--LTDGSRVSVKCLKLKQRHLP---QSLMQHVELLSKLRHRHLVSIL 513
+G G+ G + KG + G V V LKQ H+ + ++ ++++L H +V ++
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDW---KKKDMLKWPQRMAIIIGATRG 570
G C G + LV+E G L YL D+ + ++A+ +
Sbjct: 63 GVCK---------GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLES 113
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
F+H +L N+LL AK+S
Sbjct: 114 KHFVH---------RDLAARNVLLVNRHQAKIS 137
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 4e-05
Identities = 53/212 (25%), Positives = 84/212 (39%), Gaps = 40/212 (18%)
Query: 459 IGEGSQGQ--LYKGFLTD---GSRVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG G+ LY + G V+VK LK + + + + +L L H ++V
Sbjct: 12 LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKY 71
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
G C G + L++E++ GSLRDYL K L Q + G+
Sbjct: 72 KGCC------SEQGGKGLQLIMEYVPLGSLRDYL----PKHKLNLAQLLLFAQQICEGMA 121
Query: 573 FLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQYVSNQPGDGA 632
+LH + +L N+LLD K+ + + +G E Y + GD
Sbjct: 122 YLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE-----YYRVREDGDSP 173
Query: 633 ---------KE-------DVYQLGVILLQVIT 648
KE DV+ GV L +++T
Sbjct: 174 VFWYAVECLKENKFSYASDVWSFGVTLYELLT 205
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 4e-05
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G ++V+VK LK P++ +Q +++ KLRH LV + C
Sbjct: 14 LGAGQFGEVWMGTWNGTTKVAVKTLK-PGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCS- 71
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
++ P +++V E++S GSL D+L + K L+ PQ
Sbjct: 72 --EEEP-----IYIVTEYMSKGSLLDFLKSGEGKK-LRLPQ 104
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 4e-05
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 27/164 (16%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGH 515
+GEG+ G +YK G V++K ++L +P + ++ + LL +L+H ++V +L
Sbjct: 7 LGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLL-- 64
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAI-IIGATRGVQF 573
D +T ++LV E+ L+ YL D + + + + ++ RG+ +
Sbjct: 65 ------DVIHTERKLYLVFEYCDM-DLKKYL-DKRPGPLSPNLIKSIMYQLL---RGLAY 113
Query: 574 LHTGVAPGIFGNNLKTENILLDKALTAKLS------GYNIPLPS 611
H+ I +LK +NIL+++ KL+ + IPL +
Sbjct: 114 CHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT 154
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 5e-05
Identities = 31/81 (38%), Positives = 42/81 (51%)
Query: 201 NLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFL 260
N G F P S +++ S+ L NS+R IP L + L+ D+S N+F G I L
Sbjct: 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESL 486
Query: 261 FSLPSILYLNLAGNQLSEALP 281
L S+ LNL GN LS +P
Sbjct: 487 GQLTSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 5e-05
Identities = 68/294 (23%), Positives = 120/294 (40%), Gaps = 66/294 (22%)
Query: 455 PTN-----LIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQ-----RHLPQSLMQHVELLSK 503
PTN L+G+G+ G++Y + D G ++VK + + +L ++LL
Sbjct: 1 PTNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKN 60
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
L+H +V G C+ +D T+ + +E++ GS++D L A+
Sbjct: 61 LQHERIVQYYG-CL---RDD----ETLSIFMEYMPGGSVKDQLK-----------AYGAL 101
Query: 564 IIGATR--------GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP-----LP 610
TR GV++LH+ + I ++K NIL D A KL + +
Sbjct: 102 TETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 158
Query: 611 SKKGLESPLRGQ------YVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQ 664
S + G V + G G K DV+ +G +++++T K + E +
Sbjct: 159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFK 218
Query: 665 LETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ T +L + P R + LR ++A KRPS E++L
Sbjct: 219 IAT--QPTNPQLPSHVSPDAR-----NFLRR-------TFVENAKKRPSAEELL 258
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 5e-05
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHL----PQSLMQHVELLSKLRHRHLVSIL 513
IGEG+ G +YK G V++K K+K R P++ ++ ++LL +L H +++ +L
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVAIK--KIKLRFESEGIPKTALREIKLLKELNHPNIIKLL 64
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
+ H VF ++ ++D L + + +G+ F
Sbjct: 65 D--VFR---HKGDLYLVFEFMDTDLYKLIKDRQR------GLPESLIKSYLYQLLQGLAF 113
Query: 574 LHTGVAPGIFGNNLKTENILLDKALTAKL 602
H + GI +LK EN+L++ KL
Sbjct: 114 CH---SHGILHRDLKPENLLINTEGVLKL 139
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|215633 PLN03210, PLN03210, Resistant to P | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 8e-05
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLA--DNLLNGSVPDLQRLVLLEELNLGGND 206
+LE L +S E+P I L L+ + ++ +NL +P L L LNL G
Sbjct: 658 NLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEI--LPTGINLKSLYRLNLSGCS 715
Query: 207 FGPKFPSLSKNIVSVILRNNSLRSEIPSGLK--NFDQLKQFDISSNNFVGPIQSF--LFS 262
FP +S NI + L ++ E PS L+ N D+L ++ S +Q L +
Sbjct: 716 RLKSFPDISTNISWLDLDETAI-EEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMT 774
Query: 263 L--PSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313
+ PS+ L L+ LP +I KL +EI + + + LP+ I SL
Sbjct: 775 MLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESL 827
|
syringae 6; Provisional. Length = 1153 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 8e-05
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 453 FDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLV 510
F+ L+G G+ GQ+YKG + G ++K + + + + Q + +L K HR++
Sbjct: 8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIA 66
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ G I ++ P ++LV+E GS+ D + + K + LK I RG
Sbjct: 67 TYYGAFI--KKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRG 123
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ LH + ++K +N+LL + KL + +
Sbjct: 124 LSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 157
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 1e-04
Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 41/220 (18%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG G G ++ G+ + +V++K ++ + + ++ +++ KL H LV + G C
Sbjct: 12 IGSGQFGLVWLGYWLEKRKVAIKTIR-EGAMSEEDFIEEAQVMMKLSHPKLVQLYGVC-- 68
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P + LV E + +G L DYL ++ + + + G+ +L +
Sbjct: 69 -TERSP-----ICLVFEFMEHGCLSDYLR--AQRGKFSQETLLGMCLDVCEGMAYLESS- 119
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNIP-------LPSKKGLESPLR---------GQ 622
+ +L N L+ + K+S + + S G + P++ +
Sbjct: 120 --NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSK 177
Query: 623 YVSNQPGDGAKEDVYQLGVILLQVIT-GK---QVKSTSEV 658
Y S K DV+ GV++ +V + GK + +S SEV
Sbjct: 178 YSS-------KSDVWSFGVLMWEVFSEGKTPYENRSNSEV 210
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 47/209 (22%), Positives = 101/209 (48%), Gaps = 26/209 (12%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
D IGEGS G + + G +V+VK + L+++ + L V ++ +H ++V
Sbjct: 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIV 79
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ ++ G +++V+E + G+L D +T + + Q + + +
Sbjct: 80 EMYSSYLV--------GDELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLAVLKA 127
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI------PLPSKKGL-ESP--LRG 621
+ FLH A G+ ++K+++ILL KLS + +P +K L +P +
Sbjct: 128 LSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAP 184
Query: 622 QYVSNQPGDGAKEDVYQLGVILLQVITGK 650
+ +S P G + D++ LG+++++++ G+
Sbjct: 185 EVISRLPY-GTEVDIWSLGIMVIEMVDGE 212
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 15/150 (10%)
Query: 459 IGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGH 515
IGEG+ G +YKG G V++K ++L+ +P + ++ + LL +L+H ++V +
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQD- 66
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
+ Q+ S ++L+ E +S L+ YL K + + + +G+ F H
Sbjct: 67 --VLMQE-----SRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH 118
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLSGY 605
+ + +LK +N+L+D KL+ +
Sbjct: 119 ---SRRVLHRDLKPQNLLIDNKGVIKLADF 145
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 2e-04
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
++KL +L+ ++L + G +P + SLEVL++S N G IP + L +L+ + L
Sbjct: 438 ISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497
Query: 180 ADNLLNGSVP 189
N L+G VP
Sbjct: 498 NGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 2e-04
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
Query: 440 GFSLEEIEEATNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRHLPQSLMQHV 498
L + + F+ ++G G+ GQ+YKG + G ++K + + + + + +
Sbjct: 5 DIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE-EEEIKLEI 63
Query: 499 ELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK----KKD 553
+L K HR++ + G I + P ++LV+E GS+ D + + K K+D
Sbjct: 64 NMLKKYSHHRNIATYYGAFI--KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKED 121
Query: 554 MLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ + R + RG+ LH A + ++K +N+LL + KL + +
Sbjct: 122 WIAYICREIL-----RGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGV 167
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 33/163 (20%)
Query: 457 NLIGEGSQGQLYKGFLTDGSR-----VSVKCLK----LKQRHLPQSLMQHVELLSKLRHR 507
+L+ EG+ G+++ G L D V VK +K Q L L+Q LL L H+
Sbjct: 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTL---LLQESCLLYGLSHQ 68
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ-------- 559
+++ IL CI + P F++ +++ G+L+ +L + + PQ
Sbjct: 69 NILPILHVCIEDG-EPP------FVLYPYMNWGNLKLFLQQCRLGEANN-PQALSTQQLV 120
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
MAI I G+ +LH G+ ++ N ++D+ L K+
Sbjct: 121 HMAIQI--ACGMSYLHK---RGVIHKDIAARNCVIDEELQVKI 158
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 2e-04
Identities = 64/304 (21%), Positives = 116/304 (38%), Gaps = 77/304 (25%)
Query: 459 IGEGSQGQLY----KGFLTDGSR--VSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G+++ L + + V+VK LK Q + ELL+ L+H+H+V
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL----TDWKKKD--------MLKWPQR 560
G C G + +V E++ +G L +L D K L Q
Sbjct: 73 YGVC--------TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQM 124
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP------------ 608
+AI G+ +L + +L T N L+ + L K+ + +
Sbjct: 125 LAIASQIASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 181
Query: 609 ----LPSK-KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GK----QVKSTSEV 658
LP + ES L ++ + + D++ GV+L ++ T GK Q+ +T +
Sbjct: 182 GRTMLPIRWMPPESILYRKFTT-------ESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI 234
Query: 659 DGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ C+ + R P Y ++ C ++ +R I+D+
Sbjct: 235 E--------CITQGRELERPRTCPP----EVYAIMQ-------GCWQREPQQRMVIKDIH 275
Query: 719 WNLQ 722
LQ
Sbjct: 276 SRLQ 279
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 3e-04
Identities = 51/233 (21%), Positives = 92/233 (39%), Gaps = 64/233 (27%)
Query: 459 IGEGSQGQLYKGFL------TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G+++ D V+VK LK + + + ELL+ L+H H+V
Sbjct: 13 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 72
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL----------------TDWKKKDMLK 556
G C+ G + +V E++ +G L +L + + ML
Sbjct: 73 YGVCV--------EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLH 124
Query: 557 WPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP-------- 608
Q++A + F+H +L T N L+ + L K+ + +
Sbjct: 125 IAQQIAAGMVYLASQHFVH---------RDLATRNCLVGENLLVKIGDFGMSRDVYSTDY 175
Query: 609 --------LPSK-KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQ 651
LP + ES + ++ + + DV+ LGV+L ++ T GKQ
Sbjct: 176 YRVGGHTMLPIRWMPPESIMYRKFTT-------ESDVWSLGVVLWEIFTYGKQ 221
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 64/248 (25%)
Query: 459 IGEGSQGQLYKG-FLTDGSRVSVK-CLK-LKQRHLPQS---LMQHVELLSKLRHRHLVSI 512
+G G+ G +YKG ++ +G +V + +K L++ P++ ++ +++ + H H+V +
Sbjct: 15 LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK----KKDMLKWPQRMAIIIGAT 568
LG C+ S V L+ + + G L DY+ + K + +L W ++A
Sbjct: 75 LGICL---------SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIA------ 119
Query: 569 RGVQFLHTGVAPGIFGNNLKTENIL-------------LDKALTAKLSGYNIP---LPSK 612
+G+ +L + +L N+L L K L Y+ +P K
Sbjct: 120 KGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIK 176
Query: 613 -KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT----------GKQVKSTSEVDGL 661
LES L Y K DV+ GV + +++T ++ E G
Sbjct: 177 WMALESILHRIYTH-------KSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK-GE 228
Query: 662 KL-QLETC 668
+L Q C
Sbjct: 229 RLPQPPIC 236
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 67/307 (21%), Positives = 126/307 (41%), Gaps = 79/307 (25%)
Query: 458 LIGEGSQGQLYKGFLTDGSR-VSVKCL--KLKQRHLPQSLMQHVELLSKLRHRHLVSILG 514
L+GEGS G + K + + V++K + + + M+ + +L +LRH +LV+++
Sbjct: 8 LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67
Query: 515 --------HCILTYQDHPNTGSTVFLVLEHISNG----SLRDYLTDWKKKDMLKWPQRMA 562
+ + + DH TV LE NG +R YL ++
Sbjct: 68 VFRRKKRLYLVFEFVDH-----TVLDDLEKYPNGLDESRVRKYL--FQ------------ 108
Query: 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESP--LR 620
I+ RG++F H+ I ++K ENIL+ ++ KL + + L +P +
Sbjct: 109 IL----RGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF----ARTLAAPGEVY 157
Query: 621 GQYVSNQ----P----GD---GAKEDVYQLGVILLQVITGKQV-KSTSEVDGLKLQLETC 668
YV+ + P GD G D++ +G ++ +++TG+ + S++D L + C
Sbjct: 158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLY-HIIKC 216
Query: 669 LAEAPSKLRA-----------------EADPSVRGTYAYDSLRTTVEITINCLSKDAAKR 711
L + + E +P + L +++ CL D R
Sbjct: 217 LGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGL--VLDLAKQCLRIDPDDR 274
Query: 712 PSIEDVL 718
PS +L
Sbjct: 275 PSSSQLL 281
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 3e-04
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVS 511
FD +GEGS G +YK G V++K + +++ Q +++ + +L + ++V
Sbjct: 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDL--QEIIKEISILKQCDSPYIVK 62
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
G Y + +++V+E+ GS+ D + K L + AI+ +G+
Sbjct: 63 YYGS----YF----KNTDLWIVMEYCGAGSVSDIMKITNKT--LTEEEIAAILYQTLKGL 112
Query: 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
++LH + ++K NILL++ AKL
Sbjct: 113 EYLH---SNKKIHRDIKAGNILLNEEGQAKL 140
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 4e-04
Identities = 56/272 (20%), Positives = 126/272 (46%), Gaps = 43/272 (15%)
Query: 459 IGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IGEGS G + G +V+VK + L+++ + L V ++ +H+++V + +
Sbjct: 29 IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL 88
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
+ G +++++E + G+L D ++ + L Q + + + +LH
Sbjct: 89 V--------GEELWVLMEFLQGGALTDIVSQTR----LNEEQIATVCESVLQALCYLH-- 134
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNI------PLPSKKGL-ESP--LRGQYVSNQP 628
+ G+ ++K+++ILL KLS + +P +K L +P + + +S P
Sbjct: 135 -SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTP 193
Query: 629 GDGAKEDVYQLGVILLQVITGKQVK-STSEVDGLKLQLETCLAEAPSKLRAEADPSVRGT 687
G + D++ LG+++++++ G+ S S V +K +LR P ++
Sbjct: 194 Y-GTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK------------RLRDSPPPKLKNA 240
Query: 688 YAYDS-LRTTVEITINCLSKDAAKRPSIEDVL 718
+ LR +E L+++ +R + +++L
Sbjct: 241 HKISPVLRDFLE---RMLTREPQERATAQELL 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 4e-04
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 32/182 (17%)
Query: 480 VKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISN 539
KC++ + ++++ +L +L H LV++ ++QD N ++LV++ +
Sbjct: 36 QKCVE---KGSVRNVLNERRILQELNHPFLVNLW----YSFQDEEN----MYLVVDLLLG 84
Query: 540 GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599
G LR +L+ +K Q I +++LH+ GI ++K +NILLD+
Sbjct: 85 GDLRYHLS---QKVKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGH 138
Query: 600 AKLSGYNIPLPSKKGLESPLRGQYVSNQPGDGAKE-----------DVYQLGVILLQVIT 648
++ +NI + S PG A E D + LGV + +
Sbjct: 139 VHITDFNIATKVTPDTLT----TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLR 194
Query: 649 GK 650
GK
Sbjct: 195 GK 196
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 5e-04
Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRHRH 508
NF IGEG+ G +YK G V++K ++L + +P + ++ + LL +L H +
Sbjct: 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V +L D +T + ++LV E + + L+ ++ D + P + +
Sbjct: 61 IVKLL--------DVIHTENKLYLVFEFL-HQDLKKFM-DASPLSGIPLPLIKSYLFQLL 110
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H + + +LK +N+L++ KL+ + +
Sbjct: 111 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGL 146
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 5e-04
Identities = 50/219 (22%), Positives = 83/219 (37%), Gaps = 33/219 (15%)
Query: 452 NFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCL-KLKQRHLPQSLMQHVELLSKL 504
N +G G G+++ + V VK L K K +L + +++ KL
Sbjct: 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP------ 558
H+++V +LG C +++LE+ G L+ +L K KD P
Sbjct: 66 SHKNVVRLLGLC--------REAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTK 117
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG-------YNIPLPS 611
Q++A+ G+ L +L N L+ K+S YN
Sbjct: 118 QKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYK 174
Query: 612 KKGLESPLRG-QYVSNQPGD-GAKEDVYQLGVILLQVIT 648
+ PLR + Q D K DV+ GV++ +V T
Sbjct: 175 LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFT 213
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 5e-04
Identities = 65/291 (22%), Positives = 109/291 (37%), Gaps = 69/291 (23%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-------RHLPQSLMQHVELLSKLRHRHLV 510
IG+GS G + K +DG K L K+ Q L+ V +L +L+H ++V
Sbjct: 8 IGKGSFGTVRKVRRKSDG-----KILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIV 62
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-KDMLKWPQRMAIIIGATR 569
I D N T+++V+E+ G L + KK + ++ I+
Sbjct: 63 RYYDRII----DRSNQ--TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLL 116
Query: 570 GVQFLHTGVAPG--IFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQ----- 622
+ H PG + +LK NI LD KL + GL L
Sbjct: 117 ALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDF--------GLAKILGHDSSFAK 168
Query: 623 -YV-----------SNQPGDGAKEDVYQLGVILLQVITGK---QVKSTSEVDGLKLQLET 667
YV ++ D K D++ LG ++ ++ ++ +LQL +
Sbjct: 169 TYVGTPYYMSPEQLNHMSYD-EKSDIWSLGCLIYELCALSPPFTARN-------QLQLAS 220
Query: 668 CLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ E + Y+ L E+ + L+ D KRPS E++L
Sbjct: 221 KIKEGKF-------RRIPYRYS-SELN---EVIKSMLNVDPDKRPSTEELL 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRH 508
F+ N IGEG+ G +Y+ T G V++K +++ +P S ++ + LL LRH +
Sbjct: 8 EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPN 67
Query: 509 LVSILGHCILTYQDHPNTGS---TVFLVLEHISN--GSLRDYLTDWKKKDMLKWPQRMAI 563
+V + G ++FLV+E+ SL D + Q +
Sbjct: 68 IVELK---------EVVVGKHLDSIFLVMEYCEQDLASLLDNMP-----TPFSESQVKCL 113
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
++ RG+Q+LH I +LK N+LL
Sbjct: 114 MLQLLRGLQYLHENF---IIHRDLKVSNLLL 141
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 6e-04
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 30/156 (19%)
Query: 451 NNFDPTNLIGEGSQGQ----LYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHV----ELLS 502
++F+ +G GS G+ +KG G ++K L K + + ++HV +L
Sbjct: 1 DDFEFIKTLGTGSFGRVMLVRHKG---SGKYYALKILS-KAKIVKLKQVEHVLNEKRILQ 56
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
+RH LV++ G ++QD S ++LV+E++ G L +L +K ++P+ +A
Sbjct: 57 SIRHPFLVNLYG----SFQD----DSNLYLVMEYVPGGELFSHL---RKSG--RFPEPVA 103
Query: 563 IIIGA--TRGVQFLHTGVAPGIFGNNLKTENILLDK 596
A +++LH+ I +LK EN+LLD
Sbjct: 104 RFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDS 136
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 6e-04
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 149 SLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGND 206
+L+ L++S+N + IP L NLK + L+ N L P+ L L L+L GN+
Sbjct: 1 NLKSLDLSNNRL-TVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 207 F 207
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 6e-04
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 40/289 (13%)
Query: 448 EATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR- 505
+ ++ ++ IG+G+ G+++K +GS+ +VK L + + + +L L
Sbjct: 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILD-PIHDIDEEIEAEYNILKALSD 73
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--- 562
H ++V G + Y+ G ++LVLE + GS+ D + K LK +RM
Sbjct: 74 HPNVVKFYG---MYYKKDVKNGDQLWLVLELCNGGSVTDLV-----KGFLKRGERMEEPI 125
Query: 563 ---IIIGATRGVQFLHTG--VAPGIFGNN--LKTEN--ILLDKALTAKLSGYNIPLPSKK 613
I+ A G+Q LH + + GNN L TE L+D ++A+L+ + +
Sbjct: 126 IAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSV 185
Query: 614 GLESPLRGQYVS-NQPGDG---AKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCL 669
G + + ++ Q D A+ DV+ LG+ +++ G +++ ++ L
Sbjct: 186 GTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGD--PPLADLHPMR-ALFKIP 242
Query: 670 AEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
P L P + D +R CL+KD KRP++ D+L
Sbjct: 243 RNPPPTLH---QPELWSNEFNDFIR-------KCLTKDYEKRPTVSDLL 281
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 6e-04
Identities = 56/282 (19%), Positives = 123/282 (43%), Gaps = 46/282 (16%)
Query: 452 NFDPTNLIGEGSQGQLY--KGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHR 507
++ ++G G+ G ++ + D V +K + ++Q + + ++L L H
Sbjct: 1 KYEKIRVVGRGAFGIVHLCRR-KADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHP 59
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
+ I+ Y ++ + +V+E+ G+L +Y+ + +L + +
Sbjct: 60 N--------IIEYYENFLEDKALMIVMEYAPGGTLAEYIQK-RCNSLLDEDTILHFFVQI 110
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLSGYNIP-LPSKKGLESPLRGQ--Y 623
+ +HT + I +LKT+NILLDK + K+ + I + S K + G Y
Sbjct: 111 LLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCY 167
Query: 624 VSNQPGDG----AKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679
+S + +G K D++ LG +L ++ + K+ + + L L++
Sbjct: 168 ISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKI-------------- 213
Query: 680 ADPSVRGTYAYDSLRTTVEI---TINCLSKDAAKRPSIEDVL 718
+ GT+A S R + ++ ++ L+ D +KRP + ++
Sbjct: 214 ----MSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIM 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 7e-04
Identities = 37/199 (18%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ ++V+VK +K + ++ + ++ L+H LV + H ++
Sbjct: 14 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKL--HAVV 70
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
T + ++++ E ++ GSL D+L + P+ + G+ F+
Sbjct: 71 TKE-------PIYIITEFMAKGSLLDFLKS-DEGSKQPLPKLIDFSAQIAEGMAFIEQ-- 120
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNIP-------LPSKKGLESPLR--GQYVSNQPG 629
+L+ NIL+ +L K++ + + +++G + P++ N
Sbjct: 121 -RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS 179
Query: 630 DGAKEDVYQLGVILLQVIT 648
K DV+ G++L++++T
Sbjct: 180 FTIKSDVWSFGILLMEIVT 198
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 8e-04
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 143 KINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP-DLQRLVLLEELN 201
W ++ L + + + G IP +I+ L++L+SI L+ N + G++P L + LE L+
Sbjct: 413 STKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLD 472
Query: 202 LGGNDFGPKFP-SLSK--NIVSVILRNNSLRSEIPSGL 236
L N F P SL + ++ + L NSL +P+ L
Sbjct: 473 LSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 8e-04
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 459 IGEGSQGQLYKGFLTD------GSRVSVKCLKLKQRHLP-QSLMQHVELLSKLRHRHLVS 511
+GEG G++ K + V+VK LK + L+ LL ++ H H++
Sbjct: 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ G C QD P + L++E+ GSLR +L + +K
Sbjct: 68 LYGACS---QDGP-----LLLIVEYAKYGSLRSFLRESRK 99
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.001
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 459 IGEGSQGQLYKGF---LTDGSR-----VSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
+G+G+ +++KG + D V +K L R+ +S + ++S+L H+HLV
Sbjct: 3 LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKW 557
G C+ G +V E++ GSL YL K + W
Sbjct: 63 LNYGVCV--------CGDESIMVQEYVKFGSLDTYLKKNKNLINISW 101
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.001
Identities = 63/305 (20%), Positives = 128/305 (41%), Gaps = 59/305 (19%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSR-VSVKCLKLKQRH----LPQSLMQHVELLSKLR 505
N ++ ++GEG+ G + K V++K K K+ + ++ ++ V++L +LR
Sbjct: 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIK--KFKESEDDEDVKKTALREVKVLRQLR 58
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK---KDMLKWPQRMA 562
H ++V++ ++LV E++ +L + L D ++ +
Sbjct: 59 HENIVNLKEAF--------RRKGRLYLVFEYVER-TLLELLEASPGGLPPDAVR-----S 104
Query: 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLESPLR 620
I + + + H + I ++K ENIL+ ++ KL G+ L ++ SPL
Sbjct: 105 YIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARP--ASPLT 159
Query: 621 GQYVSNQ----P----GD---GAKEDVYQLGVILLQVITGKQV-KSTSEVDGLKLQLETC 668
YV+ + P GD G DV+ +G I+ +++ G+ + S++D L L +
Sbjct: 160 -DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCL 218
Query: 669 LAEAPSKL-RAEADPSVRGT-----YAYDSL---------RTTVEITINCLSKDAAKRPS 713
PS ++P G +SL ++ CL D +R +
Sbjct: 219 GPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLT 278
Query: 714 IEDVL 718
+++L
Sbjct: 279 CDELL 283
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.001
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 58/281 (20%)
Query: 459 IGEGSQGQLYKGFL----TDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVS 511
IGEGS G K L DG + +K + K+ + +S + V +LS ++H ++V
Sbjct: 8 IGEGSFG---KAILVKSKEDGKQYVIKEINISKMSPKEREES-RKEVAVLSNMKHPNIVQ 63
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-----KKDMLKWPQRMAIIIG 566
YQ+ +++V+++ G L + + + +L W ++ + +
Sbjct: 64 --------YQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALK 115
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLE-------SP- 618
+ LH ++K++NI L K T KL + I +E +P
Sbjct: 116 HVHDRKILH---------RDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPY 166
Query: 619 -LRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677
L + N+P + K D++ LG +L ++ T K + L L K+
Sbjct: 167 YLSPEICENRPYNN-KSDIWALGCVLYEMCTLKHAFEAGNMKNLVL-----------KII 214
Query: 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ P V Y+YD LR V ++ RPS+ +L
Sbjct: 215 RGSYPPVSSHYSYD-LRNLVS---QLFKRNPRDRPSVNSIL 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.001
Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 62/260 (23%)
Query: 484 KLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD-HPNTGSTVFLVLEHISNGSL 542
+Q + ++L + + L+++L H H++ +LG T +D H N L +E ++ GS+
Sbjct: 40 SSEQEEVVEALRKEIRLMARLNHPHIIRMLG---ATCEDSHFN------LFVEWMAGGSV 90
Query: 543 RDYLTDWKKKDMLKWPQRMAIIIGAT----RGVQFLHTGVAPGIFGNNLKTENILLDKA- 597
L+ + + A+II T RG+ +LH I ++K N+L+D
Sbjct: 91 SHLLSKYG-------AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTG 140
Query: 598 -------------LTAKLSG---YNIPLPSKKGLESP--LRGQYVSNQPGDGAKEDVYQL 639
L AK +G + L +P LRG+ G DV+ +
Sbjct: 141 QRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQY------GRSCDVWSV 194
Query: 640 GVILLQVITGKQVKSTSEVDG-LKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVE 698
G +++++ T K + + L L + A + P +R +
Sbjct: 195 GCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLR------------D 242
Query: 699 ITINCLSKDAAKRPSIEDVL 718
+T+ CL RP ++L
Sbjct: 243 VTLRCLELQPEDRPPSRELL 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.001
Identities = 53/281 (18%), Positives = 119/281 (42%), Gaps = 50/281 (17%)
Query: 453 FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLP-QSLMQHVELLSKLRHRHLV 510
F IG+GS G+++KG V++K + L++ + + Q + +LS+ ++
Sbjct: 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL-----TDWKKKDMLKWPQRMAIII 565
G + G+ +++++E++ GS D L +++ MLK
Sbjct: 66 KYYGSYL--------KGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK--------- 108
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP-------LPSKKGLESP 618
+G+ +LH+ ++K N+LL + KL+ + + + + +P
Sbjct: 109 EILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTP 165
Query: 619 L-RGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677
V Q +K D++ LG+ +++ G+ S D +++ + +
Sbjct: 166 FWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNS----DMHPMRVLFLIPKNNP--- 218
Query: 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
P++ G ++ + E CL+KD + RP+ +++L
Sbjct: 219 ----PTLTGEFS----KPFKEFIDACLNKDPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 16/104 (15%)
Query: 458 LIGEGSQGQLYKGFLTD--GSRVSVK---CLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
IGEG G +Y+G +++V C + + +Q ++ + H H+V +
Sbjct: 13 CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLK 556
+G ++P V++V+E G LR YL K L
Sbjct: 73 IGVI----TENP-----VWIVMELAPLGELRSYLQ--VNKYSLD 105
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 475 GSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532
G +V+VK LK + H+ L + +E+L L H ++V G C + G+ + L
Sbjct: 33 GEQVAVKSLKPESGGNHI-ADLKKEIEILRNLYHENIVKYKGIC------TEDGGNGIKL 85
Query: 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
++E + +GSL++YL K K LK + A+ I +G+ +L
Sbjct: 86 IMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQI--CKGMDYL 125
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.003
Identities = 37/160 (23%), Positives = 78/160 (48%), Gaps = 22/160 (13%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGH 515
IGEG+ G +YK G V++K ++L+ +P + ++ + LL +L H ++V +L
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLL-- 64
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
D ++ + ++LV E + + L+ Y+ D L P + + +G+ + H
Sbjct: 65 ------DVVHSENKLYLVFEFL-DLDLKKYM-DSSPLTGLDPPLIKSYLYQLLQGIAYCH 116
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLS------GYNIPL 609
+ + +LK +N+L+D+ KL+ + +P+
Sbjct: 117 SH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.003
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 452 NFDPTNLIGEGSQGQL----YKGFLTDGSRVSVKCLKLKQRHLPQSLMQHV----ELLSK 503
+F+ +G GS G++ +KG G ++KCLK K+ L +QHV +L +
Sbjct: 19 DFEMGETLGTGSFGRVRIAKHKG---TGEYYAIKCLK-KREILKMKQVQHVAQEKSILME 74
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
L H +V+++ ++QD + V+ +LE + G L +L + ++P +A
Sbjct: 75 LSHPFIVNMM----CSFQDE----NRVYFLLEFVVGGELFTHL-----RKAGRFPNDVAK 121
Query: 564 IIGA--TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKK----GL 615
A ++LH+ I +LK EN+LLD K++ G+ +P + G
Sbjct: 122 FYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGT 178
Query: 616 ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITG 649
L + + ++ G G D + +GV+L + I G
Sbjct: 179 PEYLAPEVIQSK-GHGKAVDWWTMGVLLYEFIAG 211
|
Length = 329 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 67/301 (22%), Positives = 114/301 (37%), Gaps = 80/301 (26%)
Query: 459 IGEGSQGQLYKGF------LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G+++ D V+VK LK + + ELL+ L+H H+V
Sbjct: 13 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 72
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV- 571
G C G + +V E++ +G L +L P M ++ G R
Sbjct: 73 YGVCG--------DGDPLIMVFEYMKHGDLNKFLR-------AHGPDAMILVDGQPRQAK 117
Query: 572 ------QFLH--TGVAPGI--------FGNNLKTENILLDKALTAKLSGYNIP------- 608
Q LH + +A G+ +L T N L+ L K+ + +
Sbjct: 118 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD 177
Query: 609 ---------LPSK-KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSE 657
LP + ES + ++ + + DV+ GVIL ++ T GKQ
Sbjct: 178 YYRVGGHTMLPIRWMPPESIMYRKFTT-------ESDVWSFGVILWEIFTYGKQP----- 225
Query: 658 VDGLKLQL-ETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIED 716
QL T + E ++ R P V YD I + C ++ +R +I++
Sbjct: 226 ----WFQLSNTEVIECITQGRVLERPRVCPKEVYD-------IMLGCWQREPQQRLNIKE 274
Query: 717 V 717
+
Sbjct: 275 I 275
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 40/163 (24%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSR-VSVKCLKLK--QRHLPQSLMQHVELLSKL---R 505
++ IGEG+ G+++K L +G R V++K ++++ + +P S ++ V +L L
Sbjct: 3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 62
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA-II 564
H ++V + C ++ D + + LV EH+ L YL K + + + ++
Sbjct: 63 HPNVVRLFDVCTVSRTDRE---TKLTLVFEHVDQ-DLTTYLD--KVPEPGVPTETIKDMM 116
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
RG+ FLH+ + +LK +NIL+ + KL+ + +
Sbjct: 117 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 156
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 740 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.98 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.98 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.98 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.98 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.98 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.98 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.98 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.98 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.98 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.97 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.97 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.97 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.97 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.97 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.97 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.97 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.97 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.97 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.96 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.96 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.96 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.96 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.96 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.96 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.96 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.95 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.95 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.94 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.94 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.94 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.94 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.94 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.93 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.93 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.92 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.92 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.91 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.91 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.89 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.89 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.88 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.88 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.88 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.87 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.86 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.86 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.85 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.85 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.83 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.83 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.83 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.82 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.82 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.81 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.8 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.79 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.78 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.78 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.77 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.77 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.76 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.76 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.76 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.75 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.75 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.75 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.74 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.74 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.73 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.73 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.73 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.72 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.71 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.71 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.71 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.7 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.69 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.68 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.68 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.68 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.67 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.67 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.62 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.61 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.58 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.58 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.54 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.52 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.49 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.46 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.43 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.43 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.42 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.41 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.35 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.28 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.28 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.13 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.13 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.1 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.08 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.08 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.07 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.07 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.05 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.01 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.93 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.92 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.92 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.91 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.88 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.88 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.86 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.84 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.8 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.79 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.78 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.77 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.75 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.66 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.58 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.5 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.47 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.47 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.42 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.37 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.36 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.35 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.32 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.31 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.31 | |
| PRK15386 | 426 | type III secretion protein GogB; Provisional | 98.27 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-74 Score=700.52 Aligned_cols=263 Identities=24% Similarity=0.422 Sum_probs=202.4
Q ss_pred CCHHHHHHHhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeee
Q 004637 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILT 519 (740)
Q Consensus 441 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~ 519 (740)
++++++ ...|+..+.||+|+||.||+|+. .++..||||+++.... ...+|++++++++|||||+++|+|..
T Consensus 683 ~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~- 754 (968)
T PLN00113 683 ITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRS- 754 (968)
T ss_pred hhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEc-
Confidence 344444 34577889999999999999995 5789999999864332 22456889999999999999999962
Q ss_pred ccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCc
Q 004637 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (740)
Q Consensus 520 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~ 599 (740)
++..|+|||||++|+|.++++ .++|.++.+|+.|+|+||+|||+.+.++|+||||||+||+++.++.
T Consensus 755 -------~~~~~lv~Ey~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~ 821 (968)
T PLN00113 755 -------EKGAYLIHEYIEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE 821 (968)
T ss_pred -------CCCCEEEEeCCCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCc
Confidence 345799999999999999994 2899999999999999999999766789999999999999999998
Q ss_pred eeEecCCCCCCC-----CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCc--cchhHHHHHHhhhcC
Q 004637 600 AKLSGYNIPLPS-----KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSE--VDGLKLQLETCLAEA 672 (740)
Q Consensus 600 ~kl~DFGla~~~-----~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~--~~~~~~~~~~~~~~~ 672 (740)
+++. ||.+... ..++..|++||+.. ...++.++|||||||++|||+||+.||+... ......+.......
T Consensus 822 ~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~- 898 (968)
T PLN00113 822 PHLR-LSLPGLLCTDTKCFISSAYVAPETRE-TKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSD- 898 (968)
T ss_pred eEEE-eccccccccCCCccccccccCccccc-CCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCc-
Confidence 8876 6554321 12335577777754 4568899999999999999999999986432 22233333322211
Q ss_pred CcccccccCccccC--CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhcc
Q 004637 673 PSKLRAEADPSVRG--TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQ 728 (740)
Q Consensus 673 ~~~~~~~~~~~l~~--~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (740)
.......|+.+.. ....++..++.+++.+||+.||++||+|.||++.|+.+.+..
T Consensus 899 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 899 -CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred -cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 1233344555433 234566778899999999999999999999999999886633
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-52 Score=442.20 Aligned_cols=278 Identities=38% Similarity=0.646 Sum_probs=236.5
Q ss_pred CCCCCCHHHHHHHhcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeecee
Q 004637 437 PFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516 (740)
Q Consensus 437 ~~~~~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~ 516 (740)
..+.|+++++..+|++|...++||+|+||.||+|.+++|+.||||++........++|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 35569999999999999999999999999999999999999999988755432145699999999999999999999999
Q ss_pred eeeccCCCCCCC-ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeec
Q 004637 517 ILTYQDHPNTGS-TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (740)
Q Consensus 517 ~~~~~~~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld 595 (740)
.+ ++ +.+||||||++|+|.++|+..... +++|.+|++||.++|+||+|||+.+.++||||||||+|||||
T Consensus 141 ~e--------~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD 211 (361)
T KOG1187|consen 141 LE--------GGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD 211 (361)
T ss_pred ec--------CCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC
Confidence 72 23 589999999999999999864333 899999999999999999999999989999999999999999
Q ss_pred CCCceeEecCCCCCCCC----------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCc---cchhH
Q 004637 596 KALTAKLSGYNIPLPSK----------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSE---VDGLK 662 (740)
Q Consensus 596 ~~~~~kl~DFGla~~~~----------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~---~~~~~ 662 (740)
+++++||+|||+|+... .++..|.+|||.. ....+.|+|||||||+|+|++||++|.+... ...+.
T Consensus 212 ~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~-~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~ 290 (361)
T KOG1187|consen 212 EDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAS-TGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLV 290 (361)
T ss_pred CCCCEEccCccCcccCCccccceeeecCCCCccCChhhhc-cCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHH
Confidence 99999999999997554 3455567777765 3667899999999999999999999887532 23355
Q ss_pred HHHHHhhhcCCcccccccCcccc-CCCcH-HHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 663 LQLETCLAEAPSKLRAEADPSVR-GTYAY-DSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~l~-~~~~~-~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
.|........ .+.+++|+.+. ..+.. +++.++..++.+|++.+|++||+|.||+++|+....
T Consensus 291 ~w~~~~~~~~--~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 291 EWAKPLLEEG--KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHHHHHHCc--chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 6654444433 68899999987 56654 688899999999999999999999999999965543
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-45 Score=365.52 Aligned_cols=251 Identities=22% Similarity=0.349 Sum_probs=203.1
Q ss_pred CCHHHHHHHhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecc-cccChhHHHHHHHHHhhccCcccceeeceeee
Q 004637 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518 (740)
Q Consensus 441 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~ 518 (740)
++..|++. .+.||+|..|+|||+++ .+++.+|+|.+... +....+++.+|++++++.+||+||.+||.|+.
T Consensus 76 i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 55666654 57899999999999995 46889999999644 34456789999999999999999999999973
Q ss_pred eccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC
Q 004637 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (740)
Q Consensus 519 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~ 598 (740)
. +..+.++||||++|+|++++.. .+.+++...-+|+.+|++||.|||+. ++||||||||+|||++..|
T Consensus 149 ~-------~~~isI~mEYMDgGSLd~~~k~---~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskG 216 (364)
T KOG0581|consen 149 N-------GEEISICMEYMDGGSLDDILKR---VGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKG 216 (364)
T ss_pred C-------CceEEeehhhcCCCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCC
Confidence 2 1158999999999999999953 46799999999999999999999964 8999999999999999999
Q ss_pred ceeEecCCCCCC-------CCCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCC--ccchhHHHHHHhh
Q 004637 599 TAKLSGYNIPLP-------SKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTS--EVDGLKLQLETCL 669 (740)
Q Consensus 599 ~~kl~DFGla~~-------~~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~--~~~~~~~~~~~~~ 669 (740)
++||||||.++. ...|+..|++||... ...|+.++||||||++++|+++|+.|+... ......+.+....
T Consensus 217 eVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~-g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv 295 (364)
T KOG0581|consen 217 EVKICDFGVSGILVNSIANTFVGTSAYMSPERIS-GESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV 295 (364)
T ss_pred CEEeccccccHHhhhhhcccccccccccChhhhc-CCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh
Confidence 999999999853 345677788887765 457889999999999999999999999864 2234444444444
Q ss_pred hcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 670 AEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 670 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
.+.|...... ....++.+++..|+++||.+||+++|++++--
T Consensus 296 ~~ppP~lP~~-----------~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpf 337 (364)
T KOG0581|consen 296 DEPPPRLPEG-----------EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPF 337 (364)
T ss_pred cCCCCCCCcc-----------cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHH
Confidence 4444333332 12345669999999999999999999997643
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=381.43 Aligned_cols=246 Identities=24% Similarity=0.379 Sum_probs=198.4
Q ss_pred CCeeecCCCccEEEEEecCCCEEEEEEeecccccC--hhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEE
Q 004637 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL--PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV 533 (740)
.+.||+|+||+||+|.+.....||||++....... .+.|.+|+.+|.+++|||||+++|+|... ....++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~-------~~~~~iV 118 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP-------PGSLCIV 118 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-------CCceEEE
Confidence 45699999999999999755559999998654322 45899999999999999999999999621 1158999
Q ss_pred EecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC-ceecCCCCCceeecCCC-ceeEecCCCCCCC
Q 004637 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG-IFGNNLKTENILLDKAL-TAKLSGYNIPLPS 611 (740)
Q Consensus 534 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-iiHrDlKp~NILld~~~-~~kl~DFGla~~~ 611 (740)
||||++|+|.++++.. ....+++..++.++.|||+||.|||+ .+ ||||||||+|||++.++ ++||+|||+++..
T Consensus 119 tEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~ 194 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREK 194 (362)
T ss_pred EEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceee
Confidence 9999999999999753 46779999999999999999999999 46 99999999999999997 9999999998532
Q ss_pred ---------CCCCCCccccccccC-CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccC
Q 004637 612 ---------KKGLESPLRGQYVSN-QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEAD 681 (740)
Q Consensus 612 ---------~~~~~~~~~~~~~~~-~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (740)
..|+..+++||.+.. ...|+.|+|||||||++|||+||+.||...........+... ..
T Consensus 195 ~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~--~~--------- 263 (362)
T KOG0192|consen 195 VISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVG--GL--------- 263 (362)
T ss_pred ccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc--CC---------
Confidence 245556778877654 357899999999999999999999999876543322222111 11
Q ss_pred ccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 682 PSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 682 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
+...+..+...+..++.+||..||++||++.|++..|+.+..
T Consensus 264 ---Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 264 ---RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred ---CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 111222244567799999999999999999999999997654
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-44 Score=378.35 Aligned_cols=243 Identities=23% Similarity=0.382 Sum_probs=202.3
Q ss_pred CCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEE
Q 004637 455 PTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (740)
Q Consensus 455 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~ 534 (740)
..+.||+|.||.||.|++.....||+|.++... ...+.|.+|+++|++++|+|||+++|+|. .++.+||||
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~--------~~~piyIVt 280 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCT--------KQEPIYIVT 280 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEe--------cCCceEEEE
Confidence 467899999999999999888899999998653 33478999999999999999999999996 233599999
Q ss_pred ecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCCC
Q 004637 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKG 614 (740)
Q Consensus 535 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 614 (740)
|||+.|+|.+||+. .....+...+.+.++.|||+||+||++ +++|||||.++|||++++..+||+|||+|+.....
T Consensus 281 E~m~~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDD 356 (468)
T ss_pred EecccCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCC
Confidence 99999999999976 345678899999999999999999999 79999999999999999999999999999853322
Q ss_pred CC----------CccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccccCcc
Q 004637 615 LE----------SPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683 (740)
Q Consensus 615 ~~----------~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
.. ...+||.+ ....++.|||||||||+||||+| |+.|+.+....++.+.+.+...
T Consensus 357 ~Y~~~~~~kfPIkWtAPEa~-~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyR------------- 422 (468)
T KOG0197|consen 357 EYTASEGGKFPIKWTAPEAL-NYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYR------------- 422 (468)
T ss_pred ceeecCCCCCCceecCHHHH-hhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCc-------------
Confidence 11 12344443 35678999999999999999999 8999988776666665544322
Q ss_pred ccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 684 VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 684 l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
-..+..|+..+.++|..||+.+|++|||++.+...|+....
T Consensus 423 --lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 423 --LPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred --CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 22344566778899999999999999999999888887654
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=373.15 Aligned_cols=242 Identities=20% Similarity=0.378 Sum_probs=208.1
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecc---cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
.+|...+.||+|||+.||+++. ..|+.||+|++.+. .....+.+.+||+|.+.|+|||||+++++|. +
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FE--------D 89 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFE--------D 89 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEee--------c
Confidence 5688999999999999999995 88999999999864 3455678999999999999999999999884 5
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
.+++|||.|+|++|+|..+++ ..+++++.+++.+++||+.||.|||+ .+|||||||..|++|++++++||+|||
T Consensus 90 s~nVYivLELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 90 SNNVYIVLELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred CCceEEEEEecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccc
Confidence 677999999999999999995 46779999999999999999999999 799999999999999999999999999
Q ss_pred CCCCC---------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 607 IPLPS---------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 607 la~~~---------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
+|... -.|++.|.+||.+. ...++..+||||+||+||-|++|++||......+....++......|.
T Consensus 164 LAt~le~~~Erk~TlCGTPNYIAPEVl~-k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~--- 239 (592)
T KOG0575|consen 164 LATQLEYDGERKKTLCGTPNYIAPEVLN-KSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS--- 239 (592)
T ss_pred eeeeecCcccccceecCCCcccChhHhc-cCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc---
Confidence 99533 24788899999877 677899999999999999999999999987766666655544333332
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
. ...+..+||.++|+.||.+|||+++|+.+=-.
T Consensus 240 -~------------ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 240 -H------------LSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred -c------------cCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 1 12345599999999999999999999976443
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=356.62 Aligned_cols=204 Identities=25% Similarity=0.437 Sum_probs=176.2
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecc--cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
..+|...+.||+|+||+||+|++ .++..||||.+... ..+..+.+..|+++|++++|||||++++++. .
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~--------~ 80 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE--------D 80 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe--------c
Confidence 46788888999999999999995 46899999999866 3445677899999999999999999999885 4
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC------Cce
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA------LTA 600 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~------~~~ 600 (740)
++.+|||||||.||||.+|++. .+.+++...+.++.|+|.||++||+ .+||||||||.||||+.. -.+
T Consensus 81 ~~~i~lVMEyC~gGDLs~yi~~---~~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~L 154 (429)
T KOG0595|consen 81 DDFIYLVMEYCNGGDLSDYIRR---RGRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVL 154 (429)
T ss_pred CCeEEEEEEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceE
Confidence 5679999999999999999964 5579999999999999999999999 799999999999999764 468
Q ss_pred eEecCCCCCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHh
Q 004637 601 KLSGYNIPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETC 668 (740)
Q Consensus 601 kl~DFGla~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~ 668 (740)
||+|||+|+.... |...|++||.+. ...|+.|+|+||.|+|+|||++|+.||+.....++...++..
T Consensus 155 KIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~-~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~ 229 (429)
T KOG0595|consen 155 KIADFGFARFLQPGSMAETLCGSPLYMAPEVIM-SQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKG 229 (429)
T ss_pred EecccchhhhCCchhHHHHhhCCccccCHHHHH-hccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcc
Confidence 9999999986543 556677887764 678899999999999999999999999988877776655443
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=358.03 Aligned_cols=248 Identities=21% Similarity=0.287 Sum_probs=200.7
Q ss_pred HhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccccc-------ChhHHHHHHHHHhhccCcccceeeceeeeec
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH-------LPQSLMQHVELLSKLRHRHLVSILGHCILTY 520 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~-------~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~ 520 (740)
..+.|.+.+.||+|+||.|-+|. ..+|+.||||++.++... ......+|++||++++|||||++++++.
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~--- 246 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE--- 246 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee---
Confidence 34567888999999999999998 668999999999864211 1234579999999999999999999885
Q ss_pred cCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC---
Q 004637 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA--- 597 (740)
Q Consensus 521 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~--- 597 (740)
..+..||||||++||+|.+.+- ..+.+.+..-..++.|++.|+.|||+ +||+||||||+|||+..+
T Consensus 247 -----~~ds~YmVlE~v~GGeLfd~vv---~nk~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~ 315 (475)
T KOG0615|consen 247 -----VPDSSYMVLEYVEGGELFDKVV---ANKYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAED 315 (475)
T ss_pred -----cCCceEEEEEEecCccHHHHHH---hccccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcc
Confidence 3455799999999999999995 35567777778999999999999999 799999999999999755
Q ss_pred CceeEecCCCCCCC--------CCCCCCccccccccCCC--CCCCccceehhhHHHHHHHhCCCCCCCCccch-hHHHHH
Q 004637 598 LTAKLSGYNIPLPS--------KKGLESPLRGQYVSNQP--GDGAKEDVYQLGVILLQVITGKQVKSTSEVDG-LKLQLE 666 (740)
Q Consensus 598 ~~~kl~DFGla~~~--------~~~~~~~~~~~~~~~~~--~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~-~~~~~~ 666 (740)
..+||+|||+|+.. -.|++.|.+||.+.... .+..++|+||+||+||-+++|.+||.....+. +.+++.
T Consensus 316 ~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~ 395 (475)
T KOG0615|consen 316 CLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQIL 395 (475)
T ss_pred eEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHh
Confidence 78999999999754 34778888998865432 34458999999999999999999999766555 666665
Q ss_pred HhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 667 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
+...... +..+.+..++.+++|.+||..||++|||+.|+++.-.
T Consensus 396 ~G~y~f~------------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW 439 (475)
T KOG0615|consen 396 KGRYAFG------------PLQWDRISEEALDLINWMLVVDPENRPSADEALNHPW 439 (475)
T ss_pred cCccccc------------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChh
Confidence 5433321 1223344567789999999999999999999997543
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=382.32 Aligned_cols=257 Identities=21% Similarity=0.306 Sum_probs=211.1
Q ss_pred hcCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeeccccc-ChhHHHHHHHHHhhccCcccceeeceeeeeccC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~ 522 (740)
+.+....+.||+|+||+||+|+.. +.+.||||.++..... ..++|.+|++.++.++|||||+++|.|.
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~----- 559 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR----- 559 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc-----
Confidence 344455788999999999999843 3568999999976554 6789999999999999999999999996
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccC-----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCc
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKK-----------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTEN 591 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N 591 (740)
.++..++|+|||..|||.+||+...+ ..+++..+.+.||.|||.||+||-+ ..+|||||..+|
T Consensus 560 ---~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRN 633 (774)
T KOG1026|consen 560 ---EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRN 633 (774)
T ss_pred ---cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---Ccccccchhhhh
Confidence 45669999999999999999974311 2348899999999999999999999 799999999999
Q ss_pred eeecCCCceeEecCCCCCCCCCCCCC----------ccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccch
Q 004637 592 ILLDKALTAKLSGYNIPLPSKKGLES----------PLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDG 660 (740)
Q Consensus 592 ILld~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~ 660 (740)
+|+.++..+||+|||+++.......+ ...+++......++++||||||||+|||++| |+.|+.+...++
T Consensus 634 CLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E 713 (774)
T KOG1026|consen 634 CLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE 713 (774)
T ss_pred ceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH
Confidence 99999999999999999754322111 1223344446789999999999999999998 999999887777
Q ss_pred hHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhcccccc
Q 004637 661 LKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQEGWT 732 (740)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 732 (740)
..+.++.... -..+++|+.++++||..||+.+|++||+++||-..|+...+..+-+.
T Consensus 714 VIe~i~~g~l---------------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~~~ 770 (774)
T KOG1026|consen 714 VIECIRAGQL---------------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPKYS 770 (774)
T ss_pred HHHHHHcCCc---------------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcccc
Confidence 7666543321 12355677889999999999999999999999999999887665443
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=339.63 Aligned_cols=252 Identities=20% Similarity=0.325 Sum_probs=201.8
Q ss_pred cCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecc--cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.+|++.++||+|+||+|||+. +.+|..||.|.++-. +.+..++...|+.+|++++|||||++++.... ++.
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~------~~~ 92 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI------EDN 92 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh------ccc
Confidence 346667899999999999998 778999999999844 33445678999999999999999999984331 244
Q ss_pred CceEEEEecccCcchhhhccccc-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCC-CceecCCCCCceeecCCCceeEecC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAP-GIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
..++||||||..|||.+.++..+ .++.+++..+++++.|+++||..+|+..+. -|+||||||.||+|+.+|.+||+||
T Consensus 93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDf 172 (375)
T KOG0591|consen 93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDF 172 (375)
T ss_pred hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccc
Confidence 45899999999999999997644 455789999999999999999999984332 3889999999999999999999999
Q ss_pred CCCCCCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 606 NIPLPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 606 Gla~~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|+++... .|++.|+.||.+. +..|+.||||||+||++|||+.-++||.+.+-..+...+..+ +.+ .+
T Consensus 173 GL~r~l~s~~tfA~S~VGTPyYMSPE~i~-~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg--d~~-~~ 248 (375)
T KOG0591|consen 173 GLGRFLSSKTTFAHSLVGTPYYMSPERIH-ESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG--DYP-PL 248 (375)
T ss_pred hhHhHhcchhHHHHhhcCCCcccCHHHHh-cCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC--CCC-CC
Confidence 9986543 3566667776654 567899999999999999999999999988766665555443 111 01
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
+ +......+..|+..|+..||+.||+...++.+++.
T Consensus 249 p-----------~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 249 P-----------DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred c-----------HHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 1 12334566789999999999999997777777664
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=330.22 Aligned_cols=255 Identities=17% Similarity=0.272 Sum_probs=197.6
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
++|+...++|+|+||+|||++. .+|+.||||++..+.. ...+-.+||+++|++++|+|+|.++.+|. ..
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr--------rk 73 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR--------RK 73 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH--------hc
Confidence 5678889999999999999995 4699999999976543 23456789999999999999999998884 45
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
..+++|+|||+. ++.+-|.. ....++...+.+|+.|+++|+.|+|+ .++|||||||+|||++.++.+||||||+
T Consensus 74 rklhLVFE~~dh-TvL~eLe~--~p~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 74 RKLHLVFEYCDH-TVLHELER--YPNGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred ceeEEEeeecch-HHHHHHHh--ccCCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchh
Confidence 679999999987 55444543 33457888999999999999999999 6999999999999999999999999999
Q ss_pred CCCCC-CC--------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 608 PLPSK-KG--------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 608 a~~~~-~~--------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
|+... .+ +..|.+||.+.+...|+..+||||.||++.||+||.+.|.+....+....+........++...
T Consensus 148 AR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~ 227 (396)
T KOG0593|consen 148 ARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQS 227 (396)
T ss_pred hHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHH
Confidence 97544 22 2335677877777889999999999999999999999999866544444444444333222221
Q ss_pred ccC----------cc------ccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 679 EAD----------PS------VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 679 ~~~----------~~------l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
++. |. +...++ .....+++++.+|++.||++|++.+|++..
T Consensus 228 iF~~N~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 228 IFSSNPFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred HhccCCceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 111 00 111111 223367899999999999999999998853
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=348.49 Aligned_cols=260 Identities=19% Similarity=0.329 Sum_probs=203.7
Q ss_pred HhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
..+.|+.+++||+|.||.||+|+ ..+|+.||+|+++... ........+||.||++++|||||++.+.....
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~------ 188 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK------ 188 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec------
Confidence 34556777899999999999999 6789999999998654 45566788999999999999999999987643
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
....+|||+|||+. ||.-++.. ..-.++..++..|+.|++.||+|+|+ .+|+|||||.+|||||.+|.+||+||
T Consensus 189 ~~~siYlVFeYMdh-DL~GLl~~--p~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDF 262 (560)
T KOG0600|consen 189 LSGSIYLVFEYMDH-DLSGLLSS--PGVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADF 262 (560)
T ss_pred CCceEEEEEecccc-hhhhhhcC--CCcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccc
Confidence 34569999999998 99998863 44568999999999999999999999 79999999999999999999999999
Q ss_pred CCCCCCCCCC----------CCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCcc-chhHHHHHHhhhcCCc
Q 004637 606 NIPLPSKKGL----------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEV-DGLKLQLETCLAEAPS 674 (740)
Q Consensus 606 Gla~~~~~~~----------~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~ 674 (740)
|+|+...... ..|.+||.+.+...|+.+.|+||.||||.||++|++.|.+... +++....+.+..+.+.
T Consensus 263 GLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~ 342 (560)
T KOG0600|consen 263 GLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTED 342 (560)
T ss_pred cceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChh
Confidence 9998543321 2255778888899999999999999999999999999998654 3444444444333222
Q ss_pred ccc--cccC-ccccC--CCcH-------HHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 675 KLR--AEAD-PSVRG--TYAY-------DSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 675 ~~~--~~~~-~~l~~--~~~~-------~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.+. .... ..++. .+.. ......++|+..+|..||++|.|+.++++.
T Consensus 343 ~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 343 YWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred ccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 222 1100 00111 1111 113356799999999999999999999864
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-42 Score=351.50 Aligned_cols=261 Identities=16% Similarity=0.247 Sum_probs=205.6
Q ss_pred HhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChh-HHHHHHHHHhhcc-CcccceeeceeeeeccCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQ-SLMQHVELLSKLR-HRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~-~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~ 525 (740)
..++|.+.++||.|+||.||+|+ ..+|..||||+++.+-....+ .-.||+..|+++. |||||++..++.+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d------- 80 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRD------- 80 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhc-------
Confidence 45678889999999999999999 677999999999876443333 3478999999998 9999999988763
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
....+|+|||||+. +|++++++ +...+++..++.|+.||++||+|+|. .|+.|||+||+|||+.....+||+||
T Consensus 81 ~~~~L~fVfE~Md~-NLYqLmK~--R~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 81 NDRILYFVFEFMDC-NLYQLMKD--RNRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred cCceEeeeHHhhhh-hHHHHHhh--cCCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEeccc
Confidence 22279999999986 99999986 36789999999999999999999999 69999999999999999999999999
Q ss_pred CCCCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhc-CCccc
Q 004637 606 NIPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE-APSKL 676 (740)
Q Consensus 606 Gla~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~~ 676 (740)
|+|+.... .+..|.+||.+.....|+.+.||||+|||++|+.+-++.|.+.+..+....+...... ....+
T Consensus 155 GLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 155 GLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSW 234 (538)
T ss_pred ccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccc
Confidence 99986543 2344778899888899999999999999999999999999986654433333333222 11111
Q ss_pred ccc------cC---ccccC----CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 677 RAE------AD---PSVRG----TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 677 ~~~------~~---~~l~~----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
.+. +. |...+ ..-..+..+..+++.+|+.+||++|||+.|+++.--
T Consensus 235 ~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pf 293 (538)
T KOG0661|consen 235 PEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPF 293 (538)
T ss_pred hhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcc
Confidence 110 00 01100 011125567789999999999999999999998654
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=340.08 Aligned_cols=233 Identities=21% Similarity=0.315 Sum_probs=193.1
Q ss_pred hcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
.++|++.++||+|+||+||+++ .++++.+|+|++++.. ....+...+|..||.+++||+||+++-.| +
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF--------Q 95 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF--------Q 95 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec--------c
Confidence 4678999999999999999999 4568999999998653 34457789999999999999999998544 4
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
+++.+|+|+||+.||+|..+|. +.+.+++.....++.+|+.||.|||+ .+||||||||+|||||++|+++|+||
T Consensus 96 t~~kLylVld~~~GGeLf~hL~---~eg~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDF 169 (357)
T KOG0598|consen 96 TEEKLYLVLDYLNGGELFYHLQ---REGRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDF 169 (357)
T ss_pred cCCeEEEEEeccCCccHHHHHH---hcCCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEecc
Confidence 6678999999999999999994 46779999999999999999999999 89999999999999999999999999
Q ss_pred CCCCCC---------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 606 NIPLPS---------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 606 Gla~~~---------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|+++.. -.|+..|++||+... ..|+..+|.||+||++|||++|.+||...+...+.+.+....... .
T Consensus 170 gL~k~~~~~~~~t~tfcGT~eYmAPEil~~-~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~---~ 245 (357)
T KOG0598|consen 170 GLCKEDLKDGDATRTFCGTPEYMAPEILLG-KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPL---P 245 (357)
T ss_pred ccchhcccCCCccccccCCccccChHHHhc-CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCC---C
Confidence 998632 245677888888764 478899999999999999999999999877665555444332111 1
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCC
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP 712 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP 712 (740)
....+ .+..+++.+.+..||++|-
T Consensus 246 p~~ls------------~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 246 PGYLS------------EEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CccCC------------HHHHHHHHHHhccCHHHhc
Confidence 11122 3455899999999999995
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=316.39 Aligned_cols=258 Identities=17% Similarity=0.279 Sum_probs=204.6
Q ss_pred cCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
++|...+++|+|.||.||+|+ .++|+.||||+++.... .......||++.|+.++|+||+.++++|- ..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~--------~~ 73 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFP--------HK 73 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhcc--------CC
Confidence 467778999999999999999 66799999999986642 33467899999999999999999998773 45
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
+.+.||+|||+. +|+..+++ +...++-.++..++.++.+|++|||+ ..|+||||||.|+|++++|.+||+|||+
T Consensus 74 ~~l~lVfEfm~t-dLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 74 SNLSLVFEFMPT-DLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred CceEEEEEeccc-cHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccc
Confidence 668999999987 99999975 55678999999999999999999999 7999999999999999999999999999
Q ss_pred CCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccc-hhHHHHHHhhhcCCcccc
Q 004637 608 PLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVD-GLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 608 a~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 677 (740)
|+.... .+..|.+||...+...|+...||||.|||+.||+-|.+-|.+.+.- ++.........+.+..+.
T Consensus 148 Ar~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP 227 (318)
T KOG0659|consen 148 ARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWP 227 (318)
T ss_pred hhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCc
Confidence 975432 2344678899999999999999999999999999999988876543 333333333223222222
Q ss_pred cc---cC---------ccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 678 AE---AD---------PSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 678 ~~---~~---------~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
+. .| +.+.. .-..+....++++.+++..||.+|+++.|++++=..
T Consensus 228 ~~~~lpdY~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf 284 (318)
T KOG0659|consen 228 EMTSLPDYVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKHPYF 284 (318)
T ss_pred cccccccHHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcchhh
Confidence 21 11 11111 112234456899999999999999999999987543
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=365.68 Aligned_cols=251 Identities=18% Similarity=0.338 Sum_probs=207.1
Q ss_pred CCCCCeeecCCCccEEEEEecC----CCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
..+.++||.|.||+||+|+++- ...||||.++... ++...+|+.|+.||.+++||||+++.|+.. ..
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT--------ks 702 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT--------KS 702 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe--------cC
Confidence 3567899999999999999653 4579999999763 455678999999999999999999999875 34
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
..++||.|||++|+|+.||+. ..+.+++.+.+.+.++||.||.||-+ .++|||||.++|||++.+..+|++|||+
T Consensus 703 ~PvMIiTEyMENGsLDsFLR~--~DGqftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNILVNsnLvCKVsDFGL 777 (996)
T KOG0196|consen 703 KPVMIITEYMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNILVNSNLVCKVSDFGL 777 (996)
T ss_pred ceeEEEhhhhhCCcHHHHHhh--cCCceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhheeeccceEEEeccccc
Confidence 568999999999999999985 34569999999999999999999998 8999999999999999999999999999
Q ss_pred CCCCCCCCCCc------------cccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCc
Q 004637 608 PLPSKKGLESP------------LRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPS 674 (740)
Q Consensus 608 a~~~~~~~~~~------------~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 674 (740)
++..+.....+ .+||.+ ....++.+||||||||+|||.++ |.+|+......+....+....
T Consensus 778 SRvledd~~~~ytt~GGKIPiRWTAPEAI-a~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gy----- 851 (996)
T KOG0196|consen 778 SRVLEDDPEAAYTTLGGKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGY----- 851 (996)
T ss_pred eeecccCCCccccccCCccceeecChhHh-hhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhcc-----
Confidence 98664443221 233332 34567899999999999999887 999998776665555443322
Q ss_pred ccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhcccccc
Q 004637 675 KLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQEGWT 732 (740)
Q Consensus 675 ~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 732 (740)
+-..+.+|+..+.+||+.||++|-.+||.+.||+..|+..++-+.+.+
T Consensus 852 ----------RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk 899 (996)
T KOG0196|consen 852 ----------RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLK 899 (996)
T ss_pred ----------CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhc
Confidence 223356788889999999999999999999999999999887555443
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-41 Score=348.17 Aligned_cols=243 Identities=21% Similarity=0.304 Sum_probs=197.9
Q ss_pred HHhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecc---cccChhHHHHHHHHHhhc-cCcccceeeceeeeeccC
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (740)
Q Consensus 448 ~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~---~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~ 522 (740)
+...+|...+.||+|+|++||+|+ ...++.||||++.++ .+...+.+.+|-++|.+| .||.||+|+-.|.
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQ----- 144 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQ----- 144 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEee-----
Confidence 345678889999999999999999 567999999999754 233446678899999999 8999999985542
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeE
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl 602 (740)
+...+|+|+||+++|+|.++|+ +.+.+++...+.++.+|+.||+|||+ .|||||||||+|||||+||++||
T Consensus 145 ---D~~sLYFvLe~A~nGdll~~i~---K~Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikI 215 (604)
T KOG0592|consen 145 ---DEESLYFVLEYAPNGDLLDLIK---KYGSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKI 215 (604)
T ss_pred ---cccceEEEEEecCCCcHHHHHH---HhCcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEE
Confidence 4566999999999999999995 45779999999999999999999999 79999999999999999999999
Q ss_pred ecCCCCCCCCC----------------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccch
Q 004637 603 SGYNIPLPSKK----------------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDG 660 (740)
Q Consensus 603 ~DFGla~~~~~----------------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~ 660 (740)
.|||.|+.... |+..|..||.+. ....+..+|+|+||||+|+|+.|++||.+.+...
T Consensus 216 TDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~-~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl 294 (604)
T KOG0592|consen 216 TDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLN-DSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL 294 (604)
T ss_pred eeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhc-CCCCCcccchHHHHHHHHHHhcCCCCCccccHHH
Confidence 99999853221 223333444433 4556889999999999999999999999888776
Q ss_pred hHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 661 LKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
+.+.+.....+.|.... ..+.+|+.+.|..||.+|+|.+||-++.
T Consensus 295 iFqkI~~l~y~fp~~fp----------------~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 295 IFQKIQALDYEFPEGFP----------------EDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred HHHHHHHhcccCCCCCC----------------HHHHHHHHHHHccCccccccHHHHhhCc
Confidence 66666655444433222 3455999999999999999999987654
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=341.43 Aligned_cols=248 Identities=23% Similarity=0.360 Sum_probs=191.1
Q ss_pred CCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
++...+.||+|+||+||++... +|...|||.+........+.+.+|+++|++++|||||+++|..... ....+
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~------~~~~~ 91 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSR------ENDEY 91 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccc------cCeee
Confidence 4556789999999999999954 4899999999866333356789999999999999999999964311 11368
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC-CCceeEecCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLSGYNIPL 609 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~-~~~~kl~DFGla~ 609 (740)
++.|||+++|+|.+++.+... .+++..++++.+||++||+|||+ ++||||||||+|||++. ++.+||+|||+++
T Consensus 92 ~i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~ 166 (313)
T KOG0198|consen 92 NIFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAK 166 (313)
T ss_pred EeeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCcccc
Confidence 999999999999999975332 69999999999999999999998 79999999999999999 7999999999885
Q ss_pred CCC------------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCC-ccchhHHHHHHhhhcCCccc
Q 004637 610 PSK------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTS-EVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 610 ~~~------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~-~~~~~~~~~~~~~~~~~~~~ 676 (740)
... .++..+++||.+........++||||+||++.||+||++||... .... ...........+.+
T Consensus 167 ~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~--~~~~ig~~~~~P~i 244 (313)
T KOG0198|consen 167 KLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAE--ALLLIGREDSLPEI 244 (313)
T ss_pred ccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHH--HHHHHhccCCCCCC
Confidence 332 24555677777654223335999999999999999999999863 2111 11111111110012
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
... ...+..+++.+|++.||++|||+.|+++..-..
T Consensus 245 p~~------------ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 245 PDS------------LSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred Ccc------------cCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 221 234556999999999999999999999876543
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=351.52 Aligned_cols=259 Identities=22% Similarity=0.344 Sum_probs=208.9
Q ss_pred CCHHHHHHHhcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeee
Q 004637 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCIL 518 (740)
Q Consensus 441 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~ 518 (740)
.+.++++...+.+.+...||+|+||+||+|++. ..||||+++.... ...+.|++|+.++++-||.||+-+.|||..
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 455677777778888999999999999999975 3699999986643 345789999999999999999999999952
Q ss_pred eccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC
Q 004637 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (740)
Q Consensus 519 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~ 598 (740)
....||+.+|+|-+|+.++|. ....++..+.+.|++|||+|+.|||. ++|||||||..||++.+++
T Consensus 460 ---------p~~AIiTqwCeGsSLY~hlHv--~etkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~ 525 (678)
T KOG0193|consen 460 ---------PPLAIITQWCEGSSLYTHLHV--QETKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDL 525 (678)
T ss_pred ---------CceeeeehhccCchhhhhccc--hhhhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCC
Confidence 224999999999999999985 34668899999999999999999999 8999999999999999999
Q ss_pred ceeEecCCCCCCC-----------CCCCCCccccccccCC--CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHH
Q 004637 599 TAKLSGYNIPLPS-----------KKGLESPLRGQYVSNQ--PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQL 665 (740)
Q Consensus 599 ~~kl~DFGla~~~-----------~~~~~~~~~~~~~~~~--~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~ 665 (740)
++||+|||++... ..+..-+++||.+.++ ..|++.+||||||||+|||+||..||.....+++..++
T Consensus 526 kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmV 605 (678)
T KOG0193|consen 526 KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMV 605 (678)
T ss_pred cEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEe
Confidence 9999999998321 1233446788876543 46899999999999999999999999955544433322
Q ss_pred HHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 666 ETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
-+... -+.+ .....++.+++.+|+..||..++++||.+.+|+..|+....
T Consensus 606 GrG~l----------~pd~-s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 606 GRGYL----------MPDL-SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccccc----------Cccc-hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 21110 0000 11234567788899999999999999999999999988776
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=352.79 Aligned_cols=241 Identities=23% Similarity=0.356 Sum_probs=209.8
Q ss_pred CCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
-|+..+.||+|+.|.|-.|+ ..+|+.+|||++.+.. ......+.+|+.+|+-+.||||+++|+++. ++
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe--------~~ 84 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE--------NK 84 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec--------cC
Confidence 36678899999999999999 6789999999997652 233467899999999999999999999874 56
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
.++|+|.||+++|.|++++. .++++++.+..+++.||..|+.|+|. .+|+|||+||+|+|||..+.+||+|||+
T Consensus 85 ~~lylvlEyv~gGELFdylv---~kG~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGM 158 (786)
T KOG0588|consen 85 QHLYLVLEYVPGGELFDYLV---RKGPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGM 158 (786)
T ss_pred ceEEEEEEecCCchhHHHHH---hhCCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccce
Confidence 77999999999999999995 57789999999999999999999999 7999999999999999999999999999
Q ss_pred CCC--------CCCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 608 PLP--------SKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 608 a~~--------~~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
|.. ...|..+|.+||.+.+.++.+.++||||.|||||.|+||+-||++++...+...++....+.|..
T Consensus 159 AsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~---- 234 (786)
T KOG0588|consen 159 ASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSN---- 234 (786)
T ss_pred eecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCc----
Confidence 842 34578889999999999999999999999999999999999999888777777776665555422
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
+. .++.+|+.+|++.||++|.|++||+++.-
T Consensus 235 Is------------~eaQdLLr~ml~VDp~~RiT~~eI~kHP~ 265 (786)
T KOG0588|consen 235 IS------------SEAQDLLRRMLDVDPSTRITTEEILKHPF 265 (786)
T ss_pred CC------------HHHHHHHHHHhccCccccccHHHHhhCch
Confidence 22 23449999999999999999999998754
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=332.38 Aligned_cols=253 Identities=21% Similarity=0.329 Sum_probs=200.3
Q ss_pred hcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccC-hhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHL-PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~-~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.++|++.+.||.|..++||+|+ .+.+..||||++....... .+.+.+|+..|+.++||||++++..|. .+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv--------v~ 96 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV--------VD 96 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE--------ec
Confidence 3678899999999999999999 6778999999998765443 488999999999999999999998776 34
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
..+|+||.||.+|++.+++...-+. .+++..+..|.+++++||.|||+ .|.||||||+.|||||.+|.+||+|||.
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgv 172 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGV 172 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCcee
Confidence 5599999999999999999764433 48999999999999999999999 7999999999999999999999999997
Q ss_pred CC-------------CCCCCCCCcccccc-ccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCC
Q 004637 608 PL-------------PSKKGLESPLRGQY-VSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673 (740)
Q Consensus 608 a~-------------~~~~~~~~~~~~~~-~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 673 (740)
+. ....++..+++||. ...-.+|+.|+|||||||+..||.+|..||.......+.. .......|
T Consensus 173 sa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl--~tLqn~pp 250 (516)
T KOG0582|consen 173 SASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLL--LTLQNDPP 250 (516)
T ss_pred eeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHH--HHhcCCCC
Confidence 52 12245566777887 4555689999999999999999999999998665433222 11111221
Q ss_pred cccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 674 ~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.......+ .+......+.+.+++..|+++||++|||+.++++.
T Consensus 251 ~~~t~~~~----~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 251 TLLTSGLD----KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred CcccccCC----hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 11111111 11112223467899999999999999999999864
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=349.31 Aligned_cols=253 Identities=19% Similarity=0.310 Sum_probs=193.8
Q ss_pred HhcCCCCCCeeecCCCccEEEEEe------cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceeeeec
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~ 520 (740)
..++|++.+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|+++++++ +|||||+++|+|..
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-- 82 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK-- 82 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC--
Confidence 346788999999999999999973 235689999997542 22345789999999999 89999999998752
Q ss_pred cCCCCCCCceEEEEecccCcchhhhcccccC-------------------------------------------------
Q 004637 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------------------------------------------------- 551 (740)
Q Consensus 521 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~------------------------------------------------- 551 (740)
.+..+++||||+++|+|.+++.....
T Consensus 83 -----~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T cd05102 83 -----PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGST 157 (338)
T ss_pred -----CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccc
Confidence 23458999999999999999864211
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCC--------
Q 004637 552 ----------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK-------- 613 (740)
Q Consensus 552 ----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~-------- 613 (740)
..++++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 158 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~ 234 (338)
T cd05102 158 NPPQETDDLWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKG 234 (338)
T ss_pred ccchhccccccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhccc
Confidence 1347888999999999999999998 7999999999999999999999999999864211
Q ss_pred ---CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCc
Q 004637 614 ---GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYA 689 (740)
Q Consensus 614 ---~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 689 (740)
++..+.+||... ...++.++|||||||++|||++ |+.||........... .......... +
T Consensus 235 ~~~~~~~y~aPE~~~-~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~--~~~~~~~~~~------------~ 299 (338)
T cd05102 235 SARLPLKWMAPESIF-DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQ--RLKDGTRMRA------------P 299 (338)
T ss_pred CCCCCccccCcHHhh-cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHH--HHhcCCCCCC------------C
Confidence 112355666654 4567899999999999999997 9999986443221111 1111100000 1
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 690 YDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 690 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
......+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 300 ~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 300 ENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1223456799999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-39 Score=334.83 Aligned_cols=257 Identities=20% Similarity=0.270 Sum_probs=198.6
Q ss_pred CCCHHHHHHHhcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccC---hhHHHHHHHHHhhccCcccceeecee
Q 004637 440 GFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL---PQSLMQHVELLSKLRHRHLVSILGHC 516 (740)
Q Consensus 440 ~~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~~~~Ei~il~~l~H~nIv~l~g~~ 516 (740)
.++.+++. ......||+|++|.||+|.+ +|+.||||.++...... .+.+.+|+++|++++|||||+++|++
T Consensus 14 ~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~ 87 (283)
T PHA02988 14 CIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFI 87 (283)
T ss_pred ecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeE
Confidence 35556662 22246899999999999998 68899999997553322 46788999999999999999999988
Q ss_pred eeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC
Q 004637 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596 (740)
Q Consensus 517 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~ 596 (740)
... .......++||||+++|+|.+++.. ...++|.....++.|++.||+|||+. .+++||||||+||++++
T Consensus 88 ~~~----~~~~~~~~lv~Ey~~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~ 158 (283)
T PHA02988 88 IDI----VDDLPRLSLILEYCTRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTE 158 (283)
T ss_pred Eec----ccCCCceEEEEEeCCCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECC
Confidence 631 1123468999999999999999964 45689999999999999999999973 47889999999999999
Q ss_pred CCceeEecCCCCCCC------CCCCCCccccccccC-CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhh
Q 004637 597 ALTAKLSGYNIPLPS------KKGLESPLRGQYVSN-QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCL 669 (740)
Q Consensus 597 ~~~~kl~DFGla~~~------~~~~~~~~~~~~~~~-~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~ 669 (740)
++.+||+|||+++.. ..++..+.+||.... ...++.++|||||||++|||+||+.||......+....+....
T Consensus 159 ~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~ 238 (283)
T PHA02988 159 NYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKN 238 (283)
T ss_pred CCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcC
Confidence 999999999998632 223445666776543 2567899999999999999999999998665444333221111
Q ss_pred hcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhh
Q 004637 670 AEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSI 725 (740)
Q Consensus 670 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (740)
... ..+..+...+.+++.+||+.||++|||++|+++.|+...
T Consensus 239 ~~~--------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 239 NSL--------------KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CCC--------------CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 000 011123456779999999999999999999999998654
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=319.41 Aligned_cols=260 Identities=18% Similarity=0.255 Sum_probs=201.8
Q ss_pred hcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
.+.|+..+.|++|+||.||+|+ .++++.||+|+++... ....-.-.|||.+|.+++|||||.+..+.... +
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~------~ 148 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS------N 148 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc------c
Confidence 3456678999999999999999 4568999999998654 33345678999999999999999999877532 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
-+.+|+|||||+. ||..++.. -..++...++..++.|+++|++|||+ ..|+||||||+|+|+...|.+||+|||
T Consensus 149 ~d~iy~VMe~~Eh-DLksl~d~--m~q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFG 222 (419)
T KOG0663|consen 149 MDKIYIVMEYVEH-DLKSLMET--MKQPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFG 222 (419)
T ss_pred cceeeeeHHHHHh-hHHHHHHh--ccCCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccc
Confidence 3459999999998 99999975 33678899999999999999999999 699999999999999999999999999
Q ss_pred CCCCCCCC---------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 607 IPLPSKKG---------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 607 la~~~~~~---------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
+|+..... +..|.+||...+.+.|+++.|+||+|||+.||+++++.|.+....+....+-.......+.+.
T Consensus 223 LAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iw 302 (419)
T KOG0663|consen 223 LAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIW 302 (419)
T ss_pred hhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccC
Confidence 99865433 223667888889999999999999999999999999999976544333333332222211121
Q ss_pred cccC---------------ccccCCCcHH-HHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 678 AEAD---------------PSVRGTYAYD-SLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 678 ~~~~---------------~~l~~~~~~~-~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
..++ ..++..+... ..+.-++++...+..||.+|.|+.|.++.=
T Consensus 303 pg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~ 362 (419)
T KOG0663|consen 303 PGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE 362 (419)
T ss_pred CCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc
Confidence 1111 0111112111 235668999999999999999999998753
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-39 Score=342.08 Aligned_cols=242 Identities=25% Similarity=0.357 Sum_probs=199.6
Q ss_pred HhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecc----cc-cChhHHHHHHHHHhhcc-Ccccceeeceeeeecc
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK----QR-HLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQ 521 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~----~~-~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~ 521 (740)
..++|.+.+.||+|+||.||.|+ ..++..||+|+++.. .. ...+.+.+|+.++++++ ||||++++.++.
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~---- 90 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA---- 90 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe----
Confidence 45688999999999999999998 557899999977653 12 23456779999999999 999999999875
Q ss_pred CCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC-Cce
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTA 600 (740)
Q Consensus 522 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~-~~~ 600 (740)
....+|+||||+.+|+|.+++.+ .+++.+....+++.|++.|++|+|+ .+|+||||||+|||+|.+ +++
T Consensus 91 ----t~~~~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~ 160 (370)
T KOG0583|consen 91 ----TPTKIYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNL 160 (370)
T ss_pred ----cCCeEEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCE
Confidence 33459999999999999999963 5678889999999999999999999 799999999999999999 999
Q ss_pred eEecCCCCCCC---------CCCCCCccccccccCCC-CCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhh
Q 004637 601 KLSGYNIPLPS---------KKGLESPLRGQYVSNQP-GDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 601 kl~DFGla~~~---------~~~~~~~~~~~~~~~~~-~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 670 (740)
||+|||++... ..|+..|.+||.+...+ +.+.++||||+||+||.|++|+.||+..+...+...+.....
T Consensus 161 Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~ 240 (370)
T KOG0583|consen 161 KLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF 240 (370)
T ss_pred EEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc
Confidence 99999998644 23567788888887766 557999999999999999999999998665555444433322
Q ss_pred cCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 671 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
..| ..+. ..++.+++.+|+..||.+|+|+.||++
T Consensus 241 ~~p----~~~~-----------S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 241 KIP----SYLL-----------SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred cCC----CCcC-----------CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 222 2220 234558999999999999999999994
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=340.14 Aligned_cols=243 Identities=22% Similarity=0.364 Sum_probs=196.6
Q ss_pred HhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
....|+.-.+||+|+.|.||.|+ ..+++.||||++........+-+.+|+.+|+..+|+|||.++..|.. +
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv--------~ 342 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLV--------G 342 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcc--------c
Confidence 34567777899999999999998 66789999999998877777788999999999999999999987763 3
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
+.+|+|||||++|+|.|.+. ...+++.++..|++++++||+|||. .+|||||||.+|||++.+|.+||+|||+
T Consensus 343 deLWVVMEym~ggsLTDvVt----~~~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGF 415 (550)
T KOG0578|consen 343 DELWVVMEYMEGGSLTDVVT----KTRMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGF 415 (550)
T ss_pred ceeEEEEeecCCCchhhhhh----cccccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeee
Confidence 56999999999999999984 3458999999999999999999999 7999999999999999999999999999
Q ss_pred CCCC---------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 608 PLPS---------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 608 a~~~---------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
+... -.|+.++++||.+. ...|++|.||||||++++||+-|++||-..+.-.....+..... ..-+..+
T Consensus 416 caqi~~~~~KR~TmVGTPYWMAPEVvt-rk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~-P~lk~~~ 493 (550)
T KOG0578|consen 416 CAQISEEQSKRSTMVGTPYWMAPEVVT-RKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PKLKNPE 493 (550)
T ss_pred eeccccccCccccccCCCCccchhhhh-hcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCC-CCcCCcc
Confidence 7432 23566666776654 67899999999999999999999999975333221111111111 1011222
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.+ ...+.+++.+||+.|+++||++.|+|++
T Consensus 494 kl------------S~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 494 KL------------SPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred cc------------CHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 22 3455699999999999999999999975
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=345.93 Aligned_cols=259 Identities=21% Similarity=0.336 Sum_probs=205.7
Q ss_pred HHHHHHhcCCCCCCeeecCCCccEEEEEecC--C---CEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeece
Q 004637 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTD--G---SRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGH 515 (740)
Q Consensus 444 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~--g---~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~ 515 (740)
..++...++....++||+|+||.||+|++.. + ..||||..+... .....+|.+|+++|+.++|||||++||+
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 3445555566667999999999999999543 2 238999988532 4456789999999999999999999999
Q ss_pred eeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeec
Q 004637 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (740)
Q Consensus 516 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld 595 (740)
+. ....+++|||+|+||+|.++|+. ....++..++..++.++|.||+|||+ .++|||||.++|+|++
T Consensus 230 a~--------~~~Pl~ivmEl~~gGsL~~~L~k--~~~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~ 296 (474)
T KOG0194|consen 230 AV--------LEEPLMLVMELCNGGSLDDYLKK--NKKSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYS 296 (474)
T ss_pred Ec--------CCCccEEEEEecCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheec
Confidence 86 33558999999999999999974 23369999999999999999999999 7999999999999999
Q ss_pred CCCceeEecCCCCCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHH
Q 004637 596 KALTAKLSGYNIPLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQL 665 (740)
Q Consensus 596 ~~~~~kl~DFGla~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~ 665 (740)
.++.+||+|||+++.... -...+.+||... ...|++++|||||||++||+++ |..||.+....++..++
T Consensus 297 ~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~-~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI 375 (474)
T KOG0194|consen 297 KKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLN-TGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKI 375 (474)
T ss_pred CCCeEEeCccccccCCcceeeccccccCcceecChhhhc-cCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHH
Confidence 999999999999865431 112244566554 4488999999999999999999 89999987766665555
Q ss_pred HHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhcccc
Q 004637 666 ETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQEG 730 (740)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (740)
....... ..+...+..+..++.+||..||++||+|.++.+.++.+....+.
T Consensus 376 ~~~~~r~--------------~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 376 VKNGYRM--------------PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HhcCccC--------------CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 3221111 11112345566888899999999999999999999988776553
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=305.87 Aligned_cols=243 Identities=19% Similarity=0.287 Sum_probs=199.6
Q ss_pred hcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
.++|++.+.||+|.||.||.|+ .+++-.||+|++.+.+ .+...++.+|++|-+.++||||+++|||+.
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fh-------- 92 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFH-------- 92 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhee--------
Confidence 4678889999999999999999 4567899999997653 455678999999999999999999999996
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
+....|+++||.++|++...|.+ +....+++.....++.|+|.||.|+|. ++||||||||+|+|++.++..|++||
T Consensus 93 d~~riyLilEya~~gel~k~L~~-~~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdf 168 (281)
T KOG0580|consen 93 DSKRIYLILEYAPRGELYKDLQE-GRMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADF 168 (281)
T ss_pred ccceeEEEEEecCCchHHHHHHh-cccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCC
Confidence 34569999999999999999975 344568888889999999999999999 89999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 606 NIPLPSKK-------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 606 Gla~~~~~-------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
|.+..... |+..+..||.+. ...++..+|+|++||+.||++.|.+||......+....+.+.....|.
T Consensus 169 GwsV~~p~~kR~tlcgt~dyl~pEmv~-~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~---- 243 (281)
T KOG0580|consen 169 GWSVHAPSNKRKTLCGTLDYLPPEMVE-GRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPS---- 243 (281)
T ss_pred CceeecCCCCceeeecccccCCHhhcC-CCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCc----
Confidence 99854433 344455555544 556788999999999999999999999977766665555544333321
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.+ ...+.++|.+|+..+|.+|.+..|+++.-
T Consensus 244 ~i------------s~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 244 TI------------SGGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred cc------------ChhHHHHHHHHhccCccccccHHHHhhhH
Confidence 11 23455999999999999999999998754
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=336.88 Aligned_cols=233 Identities=21% Similarity=0.338 Sum_probs=190.1
Q ss_pred CCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEE
Q 004637 455 PTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (740)
Q Consensus 455 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~ 534 (740)
..+-||.|+.|.||+|+++ ++.||||+++.- -..+|+-|++|+|||||.|.|+|. ....+||||
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCt--------qsPcyCIiM 191 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCT--------QSPCYCIIM 191 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeec--------CCceeEEee
Confidence 3578999999999999986 689999988632 234678899999999999999995 345689999
Q ss_pred ecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC----
Q 004637 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP---- 610 (740)
Q Consensus 535 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~---- 610 (740)
|||+.|-|..+|+ ....++....+.+..+||.|+.|||. ..|||||||.-||||..+..+||+|||.++.
T Consensus 192 EfCa~GqL~~VLk---a~~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 192 EFCAQGQLYEVLK---AGRPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK 265 (904)
T ss_pred eccccccHHHHHh---ccCccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence 9999999999995 45567778889999999999999999 6999999999999999999999999998743
Q ss_pred ----CCCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccC
Q 004637 611 ----SKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRG 686 (740)
Q Consensus 611 ----~~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 686 (740)
...|+..+++||.+.. ...++|+||||||||||||+||..||..-+...+ +..+-...+.-
T Consensus 266 STkMSFaGTVaWMAPEvIrn-ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI--------------IwGVGsNsL~L 330 (904)
T KOG4721|consen 266 STKMSFAGTVAWMAPEVIRN-EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI--------------IWGVGSNSLHL 330 (904)
T ss_pred hhhhhhhhhHhhhCHHHhhc-CCcccccceehhHHHHHHHHhcCCCccccchhee--------------EEeccCCcccc
Confidence 3446666777777653 4567999999999999999999999975432221 12222223333
Q ss_pred CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 687 TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 687 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
..+..|++-+.-|++.||...|..||++.+++.+|+-+
T Consensus 331 pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 331 PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 34556667777899999999999999999999999854
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=325.55 Aligned_cols=259 Identities=17% Similarity=0.256 Sum_probs=196.6
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
.|...+++|.|+||.||+|+. ++++.||||++-.+.. .-.+|+++|++++|||||++.-+|...... +.-..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~---d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTES---DEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCC---chhHH
Confidence 355578999999999999994 4579999999865432 225799999999999999999777543221 23467
Q ss_pred EEEEecccCcchhhhcccc-cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC-CceeEecCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAKLSGYNIP 608 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~-~~~kl~DFGla 608 (740)
.+||||||. +|.++++.. ..+..++...++-+..|+.+||+|||+ .+|+||||||.|+|+|.+ |.+||||||.|
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 799999997 999999742 224557777888999999999999999 899999999999999966 99999999999
Q ss_pred CCCCCCC--------CCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccch-hHHHHHHhhhcCCcccc--
Q 004637 609 LPSKKGL--------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDG-LKLQLETCLAEAPSKLR-- 677 (740)
Q Consensus 609 ~~~~~~~--------~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~-- 677 (740)
+....+. ..|.+||.+.+..+|+.+.||||.|||+.||+-|++-|.+.+..+ +.+.++....+..+.+.
T Consensus 174 K~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 174 KVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred eeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 7655543 236678888999999999999999999999999999999865443 33333322222111111
Q ss_pred -----cccCccccCC-----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 678 -----AEADPSVRGT-----YAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 678 -----~~~~~~l~~~-----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
+.-.|.+... +......+.++++.++++.+|.+|.++.|++.+-
T Consensus 254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~ 307 (364)
T KOG0658|consen 254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHP 307 (364)
T ss_pred CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcch
Confidence 1111222221 2223445678999999999999999999998753
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=331.69 Aligned_cols=255 Identities=19% Similarity=0.307 Sum_probs=201.7
Q ss_pred HhcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeeccccc-ChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
+.+...+.++||+|-||+|..+....+..||||+++..... ...+|.+|+++|.+++|||||+++|+|. .+
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~--------~D 607 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCV--------QD 607 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeee--------cC
Confidence 34456678999999999999999988899999999976544 3589999999999999999999999997 34
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
+.+++|+|||++|+|.+|+..+.... +.-..-.+|+.|||.||+||.+ .++||||+.++|||+|.++++||+|||+
T Consensus 608 ePicmI~EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgm 683 (807)
T KOG1094|consen 608 DPLCMITEYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGM 683 (807)
T ss_pred CchHHHHHHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCccc
Confidence 55899999999999999997643222 4555668899999999999999 7999999999999999999999999999
Q ss_pred CCCCCCCCCCcc-----------ccccccCCCCCCCccceehhhHHHHHHHh--CCCCCCCCccchhHHHHHHhhhcCCc
Q 004637 608 PLPSKKGLESPL-----------RGQYVSNQPGDGAKEDVYQLGVILLQVIT--GKQVKSTSEVDGLKLQLETCLAEAPS 674 (740)
Q Consensus 608 a~~~~~~~~~~~-----------~~~~~~~~~~~~~ksDVwSfGvil~Ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~ 674 (740)
++....+..+.. +.|-.. -.++++++|||+|||++||+++ .++||.....++..+.........+.
T Consensus 684 sR~lysg~yy~vqgr~vlpiRwmawEsil-lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~ 762 (807)
T KOG1094|consen 684 SRNLYSGDYYRVQGRAVLPIRWMAWESIL-LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGR 762 (807)
T ss_pred ccccccCCceeeecceeeeeeehhHHHHH-hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCc
Confidence 986555443322 223222 3467899999999999999987 67898866655554444333332221
Q ss_pred ccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 675 KLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 675 ~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
.. ....+.-++..+++++.+||..|-++||+++++...|++.
T Consensus 763 ~~--------~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 763 QV--------VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ce--------eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11 1122344567788999999999999999999999988864
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=326.33 Aligned_cols=250 Identities=21% Similarity=0.252 Sum_probs=199.6
Q ss_pred HHhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccc--------------cChhHHHHHHHHHhhccCccccee
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--------------HLPQSLMQHVELLSKLRHRHLVSI 512 (740)
Q Consensus 448 ~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~--------------~~~~~~~~Ei~il~~l~H~nIv~l 512 (740)
+..+.|++.+.||+|.||.|-+|+ ..+++.||||++.+... ...+...+||.||++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 456789999999999999999999 45799999999975321 112478899999999999999999
Q ss_pred eceeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCC-CCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCc
Q 004637 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTEN 591 (740)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N 591 (740)
+.+.- . ...+.+|||+|||..|.+...= ...+ +++.+.++|++++..||+|||. ++||||||||+|
T Consensus 174 iEvLD-----D-P~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsN 240 (576)
T KOG0585|consen 174 IEVLD-----D-PESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSN 240 (576)
T ss_pred EEeec-----C-cccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhh
Confidence 98653 2 2456799999999999886543 2334 8999999999999999999999 799999999999
Q ss_pred eeecCCCceeEecCCCCCCC--------------CCCCCCccccccccC---CCCCCCccceehhhHHHHHHHhCCCCCC
Q 004637 592 ILLDKALTAKLSGYNIPLPS--------------KKGLESPLRGQYVSN---QPGDGAKEDVYQLGVILLQVITGKQVKS 654 (740)
Q Consensus 592 ILld~~~~~kl~DFGla~~~--------------~~~~~~~~~~~~~~~---~~~~~~ksDVwSfGvil~ElltG~~p~~ 654 (740)
+||+++|++||+|||.+... ..|++.+++||.... ....+.+.||||+||+||-|+.|+.||-
T Consensus 241 LLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~ 320 (576)
T KOG0585|consen 241 LLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFF 320 (576)
T ss_pred eEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcc
Confidence 99999999999999997533 346777788887665 2344778999999999999999999998
Q ss_pred CCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 655 TSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
+.....+...+.......|. ..+.-..+.+||.++|.+||++|.+..+|..+..-.
T Consensus 321 ~~~~~~l~~KIvn~pL~fP~--------------~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 321 DDFELELFDKIVNDPLEFPE--------------NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT 376 (576)
T ss_pred cchHHHHHHHHhcCcccCCC--------------cccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence 77666655555433222221 112234566999999999999999999998776543
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=335.80 Aligned_cols=239 Identities=25% Similarity=0.324 Sum_probs=198.6
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
++|.+.+.||+|+||.||||+. .+.+.||+|.+.+..+ +..+.+.+|++|+++++|||||.++++| +..
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf--------Et~ 73 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF--------ETS 73 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh--------ccc
Confidence 5788899999999999999994 4688999999976543 3346789999999999999999999766 466
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
.++|+|.|||.| +|..+|. ..+.+++..+..++.++..||.|||+ .+|+|||+||.|||++..|++|+||||+
T Consensus 74 ~~~~vVte~a~g-~L~~il~---~d~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 74 AHLWVVTEYAVG-DLFTILE---QDGKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred ceEEEEehhhhh-hHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhh
Confidence 789999999987 9999995 46679999999999999999999999 6999999999999999999999999999
Q ss_pred CCCC---------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 608 PLPS---------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 608 a~~~---------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
|+.. -.|++.|++||.+. +..|+..+|.||+|||+|||++|++||.......+.+.+.......
T Consensus 147 Ar~m~~~t~vltsikGtPlYmAPElv~-e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~------ 219 (808)
T KOG0597|consen 147 ARAMSTNTSVLTSIKGTPLYMAPELVE-EQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKP------ 219 (808)
T ss_pred hhhcccCceeeeeccCcccccCHHHHc-CCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCC------
Confidence 9643 24667788888766 6778899999999999999999999998766555444443221111
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
+......+..++...+.+||.+|.+-.+++.+-
T Consensus 220 ----------p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp 252 (808)
T KOG0597|consen 220 ----------PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHP 252 (808)
T ss_pred ----------cccccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence 112334566899999999999999999988643
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=329.89 Aligned_cols=244 Identities=17% Similarity=0.272 Sum_probs=196.7
Q ss_pred HhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
..++|++...||+|+||.||.|+ ..+|..+|+|++++.. ....+.++.|-.+|...++|.||++|..|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-------- 210 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-------- 210 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe--------
Confidence 56789999999999999999999 5569999999998763 34456788999999999999999998655
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
++.+++||||||.+|||+..+|. ..+.|++.....++.+++-|++.||. .|+|||||||+|+|||..|++||+|
T Consensus 211 QD~~~LYLiMEylPGGD~mTLL~---~~~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSD 284 (550)
T KOG0605|consen 211 QDKEYLYLIMEYLPGGDMMTLLM---RKDTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSD 284 (550)
T ss_pred cCCCeeEEEEEecCCccHHHHHH---hcCcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeecc
Confidence 35678999999999999999994 57789999999999999999999999 7999999999999999999999999
Q ss_pred CCCCCCC--------------------------------------------------------CCCCCCccccccccCCC
Q 004637 605 YNIPLPS--------------------------------------------------------KKGLESPLRGQYVSNQP 628 (740)
Q Consensus 605 FGla~~~--------------------------------------------------------~~~~~~~~~~~~~~~~~ 628 (740)
||++... ..|++.|++||.+. +.
T Consensus 285 FGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll-~k 363 (550)
T KOG0605|consen 285 FGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLL-GK 363 (550)
T ss_pred ccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHh-cC
Confidence 9997210 01233455566555 45
Q ss_pred CCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCC
Q 004637 629 GDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDA 708 (740)
Q Consensus 629 ~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP 708 (740)
.|+..+|.||+|||||||+.|-+||...+..+....+........ .+...+ ...+..++|.+|+. ||
T Consensus 364 gY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~--fP~~~~----------~s~eA~DLI~rll~-d~ 430 (550)
T KOG0605|consen 364 GYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK--FPEEVD----------LSDEAKDLITRLLC-DP 430 (550)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc--CCCcCc----------ccHHHHHHHHHHhc-CH
Confidence 589999999999999999999999999887776665544332211 111111 12456799999999 99
Q ss_pred CCCC---CHHHHHHH
Q 004637 709 AKRP---SIEDVLWN 720 (740)
Q Consensus 709 ~~RP---s~~evl~~ 720 (740)
++|- .++||-++
T Consensus 431 ~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 431 ENRLGSKGAEEIKKH 445 (550)
T ss_pred HHhcCcccHHHHhcC
Confidence 9996 46666543
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-39 Score=319.97 Aligned_cols=240 Identities=21% Similarity=0.346 Sum_probs=202.8
Q ss_pred cCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
.+|++.+.||+|.||.|-+|+ ...|+.||||.+++..- ++.-.+.+|++||+.++||||+.+|.+| ++
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF--------EN 124 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF--------EN 124 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh--------cC
Confidence 467788999999999999998 56799999999986543 3334678999999999999999999877 35
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
.+.+.|||||..+|.|+||+. ..+.+++.+...+++||..|+.|+|. .+++|||||.+|||+|.++++||+|||
T Consensus 125 kdKIvivMEYaS~GeLYDYiS---er~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 125 KDKIVIVMEYASGGELYDYIS---ERGSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred CceEEEEEEecCCccHHHHHH---HhccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccc
Confidence 677999999999999999995 45679999999999999999999999 699999999999999999999999999
Q ss_pred CCCC--------CCCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 607 IPLP--------SKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 607 la~~--------~~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
++-. ...|..-|..||.+.+.++-++.+|-||+||+||-|+.|..||++.+...+..++.......|..
T Consensus 199 LSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~--- 275 (668)
T KOG0611|consen 199 LSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPET--- 275 (668)
T ss_pred hhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCC---
Confidence 9832 23456667778888888888999999999999999999999999988777766665543322211
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
+....-+|.+|+..+|++|.|+.+|...-
T Consensus 276 --------------PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 276 --------------PSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred --------------CchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 11233789999999999999999998754
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=308.31 Aligned_cols=230 Identities=20% Similarity=0.281 Sum_probs=192.1
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|+..+.||.|+||.|..++. .+|..+|+|++++.. .+..+...+|..+|+.+.||+++++++.|. +
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~--------d 115 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK--------D 115 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec--------c
Confidence 5677789999999999999994 468899999998653 344567889999999999999999998774 4
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
.+.+||||||.+||.|..+++ +.++++++..+.++.||+.||+|||+ .+|++||+||+|||||.+|.+||.|||
T Consensus 116 ~~~lymvmeyv~GGElFS~Lr---k~~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 116 NSNLYMVMEYVPGGELFSYLR---KSGRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred CCeEEEEEeccCCccHHHHHH---hcCCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEecc
Confidence 567999999999999999995 56679999999999999999999999 799999999999999999999999999
Q ss_pred CCCCCC------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 607 IPLPSK------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 607 la~~~~------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
+|+... .|++.|.+||.+. ...|+.++|.|||||++|||+.|.+||.......+.+.+....... +..+
T Consensus 190 FAK~v~~rT~TlCGTPeYLAPEii~-sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~f----P~~f 264 (355)
T KOG0616|consen 190 FAKRVSGRTWTLCGTPEYLAPEIIQ-SKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKF----PSYF 264 (355)
T ss_pred ceEEecCcEEEecCCccccChHHhh-cCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccC----Cccc
Confidence 996543 4667788888765 5678899999999999999999999999877765555554433322 2233
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCC
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKR 711 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~R 711 (740)
.+ .+.+|+.+.++.|-.+|
T Consensus 265 s~------------~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 265 SS------------DAKDLLKKLLQVDLTKR 283 (355)
T ss_pred CH------------HHHHHHHHHHhhhhHhh
Confidence 32 34488889999998888
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=360.37 Aligned_cols=248 Identities=21% Similarity=0.341 Sum_probs=199.7
Q ss_pred CCCCCCeeecCCCccEEEEEecC--CC----EEEEEEeecc-cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLTD--GS----RVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~~--g~----~vAvK~l~~~-~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
..+..+.||+|+||.||+|.+.+ |. .||||.++.. +.+...+|.+|..+|++++|||||+++|+|..
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~------ 766 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD------ 766 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC------
Confidence 34557899999999999999653 43 4899998755 34556789999999999999999999999973
Q ss_pred CCCCceEEEEecccCcchhhhcccccC----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCce
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKK----KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTA 600 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~ 600 (740)
....++++|||++|||..||++.+. ...++....+.++.|||+|+.||++ +++|||||.++|+||++...+
T Consensus 767 --~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~V 841 (1025)
T KOG1095|consen 767 --SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVV 841 (1025)
T ss_pred --CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcE
Confidence 3447999999999999999986422 4468899999999999999999999 899999999999999999999
Q ss_pred eEecCCCCCCCCCCC-----------CCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHh
Q 004637 601 KLSGYNIPLPSKKGL-----------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETC 668 (740)
Q Consensus 601 kl~DFGla~~~~~~~-----------~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~ 668 (740)
||+|||+|+...... ..+++||.+ ....++.|+|||||||++||++| |..||......++...+...
T Consensus 842 KIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl-~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g 920 (1025)
T KOG1095|consen 842 KIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESL-KDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG 920 (1025)
T ss_pred EEcccchhHhhhhchheeccCccccceecCCHHHH-hhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC
Confidence 999999997322111 113344444 35778999999999999999999 88999876655544432221
Q ss_pred hhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 669 LAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 669 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
. +-+.+..|+..+.++|..||+.+|++||++..+++.++.+.+
T Consensus 921 g---------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 921 G---------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred C---------------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 1 112344566788899999999999999999999999887764
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=327.62 Aligned_cols=252 Identities=18% Similarity=0.310 Sum_probs=189.5
Q ss_pred cCCCCCCeeecCCCccEEEEEecC-----------------CCEEEEEEeeccc-ccChhHHHHHHHHHhhccCccccee
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTD-----------------GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSI 512 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~-----------------g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l 512 (740)
++|.+.+.||+|+||.||+|+..+ +..||+|.++... .....++.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 568889999999999999997532 3469999987543 2234578999999999999999999
Q ss_pred eceeeeeccCCCCCCCceEEEEecccCcchhhhccccc----------------CCCCCCHHHHHHHHHHHHHHHHHHHc
Q 004637 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK----------------KKDMLKWPQRMAIIIGATRGVQFLHT 576 (740)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~ia~gL~yLH~ 576 (740)
++++. ..+..++||||+++|+|.+++.... ....++|..+..++.|++.||+|||+
T Consensus 85 ~~~~~--------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~ 156 (304)
T cd05096 85 LGVCV--------DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS 156 (304)
T ss_pred EEEEe--------cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99885 2345899999999999999885421 11347888999999999999999998
Q ss_pred CCCCCceecCCCCCceeecCCCceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHH
Q 004637 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQ 645 (740)
Q Consensus 577 ~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~E 645 (740)
.+|+||||||+|||+++++.+||+|||+++....+ ...+++||... ...++.++|||||||++||
T Consensus 157 ---~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~e 232 (304)
T cd05096 157 ---LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECIL-MGKFTTASDVWAFGVTLWE 232 (304)
T ss_pred ---CCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHh-cCCCCchhhhHHHHHHHHH
Confidence 79999999999999999999999999998643211 22355666544 4457899999999999999
Q ss_pred HHh--CCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 646 VIT--GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 646 llt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
|++ |..||...........+............. ..+..++..+.+++.+||+.||++|||+.||.+.|+
T Consensus 233 l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 233 ILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYL--------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHccCCCCCCcCCHHHHHHHHHHHhhhccccccc--------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 997 556776544333333322221111000000 011123356779999999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-38 Score=314.00 Aligned_cols=264 Identities=20% Similarity=0.266 Sum_probs=200.3
Q ss_pred cCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcc-cceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRH-LVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~n-Iv~l~g~~~~~~~~~~~~ 526 (740)
..|+..++||+|+||+||+|+ ..+|+.||+|+++.... ..+....+|+.++++++|+| ||++++++..... ...
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~--~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN--HRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc--ccc
Confidence 345556789999999999999 56789999999987643 45677899999999999999 9999999864321 234
Q ss_pred CCceEEEEecccCcchhhhcccccCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
...+++|+||++. +|.+++....+. ..++...++.+++|+++||+|||+ .+|+||||||.|||++++|.+||+||
T Consensus 89 ~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 89 IGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred cceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeecc
Confidence 4578999999976 999999753322 356778899999999999999999 79999999999999999999999999
Q ss_pred CCCCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhh-hcCCcc
Q 004637 606 NIPLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCL-AEAPSK 675 (740)
Q Consensus 606 Gla~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~-~~~~~~ 675 (740)
|+|+.... .+..|.+||.+.+...|++..||||+|||+.||+++++.|.+....+....+-... .+....
T Consensus 165 GlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 165 GLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD 244 (323)
T ss_pred chHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence 99864321 22336677888888889999999999999999999999999766533333332222 222122
Q ss_pred ccccc---Cc--cccCCC-cH----HH---HHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 676 LRAEA---DP--SVRGTY-AY----DS---LRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 ~~~~~---~~--~l~~~~-~~----~~---~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+.... +- ...... +. .. .....+++.+|++.+|.+|.|++.++++
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 22111 11 111000 00 11 1356799999999999999999999987
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=325.21 Aligned_cols=243 Identities=18% Similarity=0.216 Sum_probs=188.5
Q ss_pred CCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
|+..+.||+|+||.||+|.. .+|+.||||.+.... ......+.+|++++++++|+||+++++++. .++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~--------~~~ 73 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYE--------TKD 73 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEc--------cCC
Confidence 67789999999999999984 579999999987542 222346789999999999999999998774 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++
T Consensus 74 ~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~ 149 (285)
T cd05631 74 ALCLVLTIMNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLA 149 (285)
T ss_pred eEEEEEEecCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 689999999999999887542 23458999999999999999999999 79999999999999999999999999998
Q ss_pred CCCC--------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 609 LPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 609 ~~~~--------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
.... .++..+.+||... ...++.++|||||||++|||++|+.||...........+...........
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---- 224 (285)
T cd05631 150 VQIPEGETVRGRVGTVGYMAPEVIN-NEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEY---- 224 (285)
T ss_pred EEcCCCCeecCCCCCCCccCHhhhc-CCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccC----
Confidence 5422 2344456666654 45678999999999999999999999986543322222221111111111
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS-----IEDVLWN 720 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 720 (740)
+......+.+++.+||+.||++||+ ++|++++
T Consensus 225 --------~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 225 --------SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred --------CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 1112245668999999999999997 7888874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=347.50 Aligned_cols=256 Identities=18% Similarity=0.236 Sum_probs=201.8
Q ss_pred cCCCCCCeeecCCCccEEEEEecCC-CEEEEEEeecccccChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCCC-C
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDG-SRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNT-G 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~g-~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~~-~ 527 (740)
.++++.+.|.+|||+.||.|....+ ..||+|++-..++...+.+.+||++|++|+ |+|||.+++..... ..... .
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~--~~~~~~~ 114 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAIN--RSSNNGV 114 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEecccccc--ccCCCce
Confidence 3456788999999999999996655 999999998777777788999999999997 99999999943211 11112 3
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
.+++|+||||+||.|-|++..+. ...|++.++++|+.|+++|+++||. ++++|||||||-+||||+.++..||||||.
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rl-q~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRL-QTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHH-hccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 67899999999999999997633 3449999999999999999999997 577899999999999999999999999998
Q ss_pred CCCC------------------CCCCCCccccccc--cCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHH
Q 004637 608 PLPS------------------KKGLESPLRGQYV--SNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLET 667 (740)
Q Consensus 608 a~~~------------------~~~~~~~~~~~~~--~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~ 667 (740)
|... ...+..|.+||.+ |.....++|+||||+||+||-|+....||.....-.+ ..
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI----ln 268 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI----LN 268 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE----Ee
Confidence 7321 1123446666653 4556779999999999999999999999986532211 11
Q ss_pred hhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhcc
Q 004637 668 CLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQ 728 (740)
Q Consensus 668 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (740)
.....| ........+.+||..||+.||++||++.+|+..+.++...+
T Consensus 269 g~Y~~P--------------~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 269 GNYSFP--------------PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred ccccCC--------------CCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 111111 11234566779999999999999999999999998876543
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-39 Score=326.58 Aligned_cols=239 Identities=23% Similarity=0.391 Sum_probs=196.0
Q ss_pred CCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.|+..+.||+|+||.||||. ...++.||+|++..... ...+++.+|+.++..++++||.++||.+. .+..
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl--------~g~~ 85 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYL--------KGTK 85 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhee--------eccc
Confidence 46667899999999999999 45689999999987643 34578999999999999999999999886 4556
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
++++||||.||++.+.+. ....+++..+..|++++..|+.|||. .+.+|||||+.|||+..+|.+|++|||.+.
T Consensus 86 LwiiMey~~gGsv~~lL~---~~~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ 159 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLK---SGNILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAG 159 (467)
T ss_pred HHHHHHHhcCcchhhhhc---cCCCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceee
Confidence 899999999999999994 34455888888899999999999999 799999999999999999999999999972
Q ss_pred ---------CCCCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 610 ---------PSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 610 ---------~~~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
....|++.+++||.+. ..+|+.|+||||+|++.+||++|.+|+........... +....
T Consensus 160 ql~~~~~rr~tfvGTPfwMAPEVI~-~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl-----------Ipk~~ 227 (467)
T KOG0201|consen 160 QLTNTVKRRKTFVGTPFWMAPEVIK-QSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL-----------IPKSA 227 (467)
T ss_pred eeechhhccccccccccccchhhhc-cccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe-----------ccCCC
Confidence 2345777788888877 67899999999999999999999999986554221111 11222
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.|.+.+ .....+.+++..|+++||+.||++.++++.
T Consensus 228 PP~L~~----~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 228 PPRLDG----DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred CCcccc----ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 233322 223456699999999999999999999863
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-38 Score=329.10 Aligned_cols=240 Identities=17% Similarity=0.251 Sum_probs=191.5
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++. +
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~ 72 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH--------D 72 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc--------c
Confidence 46888999999999999999954 68999999997542 223456889999999999999999998764 4
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
+...++||||+++|+|.+++.. ...+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 73 QRFLYMLMEYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred CCeEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecC
Confidence 4678999999999999999953 4568899999999999999999999 799999999999999999999999999
Q ss_pred CCCCCCC------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 607 IPLPSKK------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 607 la~~~~~------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
+++.... ++..+.+||... ...++.++|||||||++|||+||+.||...........+...... .....
T Consensus 147 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~----~~~~~ 221 (291)
T cd05612 147 FAKKLRDRTWTLCGTPEYLAPEVIQ-SKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLE----FPRHL 221 (291)
T ss_pred cchhccCCcccccCChhhcCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcC----CCccC
Confidence 9864322 344566677654 456789999999999999999999999876544433333221111 11111
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHHh
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS-----IEDVLWNL 721 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~L 721 (740)
...+.+++.+||+.||++||+ ++|++++-
T Consensus 222 ------------~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 222 ------------DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred ------------CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence 234569999999999999995 88888654
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=326.14 Aligned_cols=256 Identities=19% Similarity=0.269 Sum_probs=193.5
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++||||+++++++. ..+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--------~~~ 76 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIH--------TER 76 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEc--------CCC
Confidence 5688899999999999999985 468899999997543 233457889999999999999999999874 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++
T Consensus 77 ~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 77 CLTLVFEYLDS-DLKQYLDN--CGNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred eEEEEEeCCCc-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcce
Confidence 68999999985 99998853 23457889999999999999999998 79999999999999999999999999998
Q ss_pred CCCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc-cc
Q 004637 609 LPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL-RA 678 (740)
Q Consensus 609 ~~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 678 (740)
+... .++..+.+||.......++.++||||+||++|||+||+.||...+..+....+.......+... ..
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07871 151 RAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPG 230 (288)
T ss_pred eeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhc
Confidence 5322 1233466677666556788999999999999999999999987655443333332222111111 11
Q ss_pred c---------cCccccCCC----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 679 E---------ADPSVRGTY----AYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 679 ~---------~~~~l~~~~----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
. ..+...... .........+++.+|++.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 231 ITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred cccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 011100000 00122456799999999999999999999864
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=295.15 Aligned_cols=258 Identities=17% Similarity=0.228 Sum_probs=202.5
Q ss_pred hcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
.++|.+.+.+|+|||+.||.++ ..++..+|+|++.....+..+..++|++..++++||||+++++++..... ....
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~---D~~~ 96 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEK---DGKH 96 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhc---cCce
Confidence 4679999999999999999999 77899999999988777777889999999999999999999999874333 2456
Q ss_pred ceEEEEecccCcchhhhcccccC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKK-KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
..|++++|...|+|.+.+...+. +..+++.+.+.|+.++++||++||+. .++++||||||.|||+.+++.+++.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccC
Confidence 79999999999999999976543 44789999999999999999999984 34699999999999999999999999998
Q ss_pred CCCCCC------------------CCCCccccccccCCC--CCCCccceehhhHHHHHHHhCCCCCCCCcc--chhHHHH
Q 004637 608 PLPSKK------------------GLESPLRGQYVSNQP--GDGAKEDVYQLGVILLQVITGKQVKSTSEV--DGLKLQL 665 (740)
Q Consensus 608 a~~~~~------------------~~~~~~~~~~~~~~~--~~~~ksDVwSfGvil~ElltG~~p~~~~~~--~~~~~~~ 665 (740)
+..... -+..+.+||.+.... ..++++|||||||++|+|+.|..||..... ..+...+
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv 255 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAV 255 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEee
Confidence 753321 123355565543222 347899999999999999999999973211 1111111
Q ss_pred HHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhh
Q 004637 666 ETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSI 725 (740)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (740)
..+.+.........+.+.+++..|++.||.+||++.|++..++...
T Consensus 256 --------------~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 256 --------------QNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred --------------eccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1111111111113456779999999999999999999999988653
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=315.59 Aligned_cols=263 Identities=17% Similarity=0.275 Sum_probs=200.3
Q ss_pred HhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEee--cccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~--~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
....|...+.||+|+||.|..|. ..+|+.||||++. -+.....++..+|+++|+.++|+|||.+++.+... ...
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~---~~~ 96 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPP---SRD 96 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccc---ccc
Confidence 34556667899999999999998 4578999999987 33444557889999999999999999999987642 223
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.-..+|+|+|+|+. +|.+.++ ....++......++.|+++||.|+|+ -+|+|||+||+|++++.+...||+||
T Consensus 97 ~f~DvYiV~elMet-DL~~iik---~~~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DF 169 (359)
T KOG0660|consen 97 KFNDVYLVFELMET-DLHQIIK---SQQDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDF 169 (359)
T ss_pred ccceeEEehhHHhh-HHHHHHH---cCccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccc
Confidence 44669999999965 9999995 34458899999999999999999999 69999999999999999999999999
Q ss_pred CCCCCCCC----C-------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCc
Q 004637 606 NIPLPSKK----G-------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPS 674 (740)
Q Consensus 606 Gla~~~~~----~-------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 674 (740)
|+|+.... + +..|.+||......+|+.+.||||.|||+.||++|++-|.+.+...-...+.......++
T Consensus 170 GLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~ 249 (359)
T KOG0660|consen 170 GLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSE 249 (359)
T ss_pred cceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCH
Confidence 99987632 1 223557777777889999999999999999999999999876543333333222222111
Q ss_pred -ccccccCcc---------------ccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 675 -KLRAEADPS---------------VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 675 -~~~~~~~~~---------------l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
.+...-.+. +...++ ......++++.+||..||.+|+|++|++++--
T Consensus 250 e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~hPY 312 (359)
T KOG0660|consen 250 EDLQKIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAHPY 312 (359)
T ss_pred HHHHHhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcChh
Confidence 111111000 000011 22335679999999999999999999998754
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=336.55 Aligned_cols=251 Identities=19% Similarity=0.295 Sum_probs=191.8
Q ss_pred HhcCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceeeeec
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~ 520 (740)
..++|++.+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|+++++.+ +|||||+++++|.
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~--- 112 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT--- 112 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec---
Confidence 3457888999999999999998731 24579999997543 22345688999999999 8999999999885
Q ss_pred cCCCCCCCceEEEEecccCcchhhhccccc--------------------------------------------------
Q 004637 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWK-------------------------------------------------- 550 (740)
Q Consensus 521 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-------------------------------------------------- 550 (740)
.++..++|||||++|+|.++++...
T Consensus 113 -----~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (374)
T cd05106 113 -----HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPV 187 (374)
T ss_pred -----CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCc
Confidence 3456899999999999999885321
Q ss_pred -----------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCC
Q 004637 551 -----------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK 613 (740)
Q Consensus 551 -----------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 613 (740)
....+++..+.+++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~ 264 (374)
T cd05106 188 SSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMN 264 (374)
T ss_pred cccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccC
Confidence 11347889999999999999999998 7999999999999999999999999999854221
Q ss_pred C-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccccC
Q 004637 614 G-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEAD 681 (740)
Q Consensus 614 ~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (740)
. ...+++||... ...++.++|||||||++|||++ |+.||............... ........
T Consensus 265 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~--~~~~~~~~--- 338 (374)
T cd05106 265 DSNYVVKGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKR--GYQMSRPD--- 338 (374)
T ss_pred CcceeeccCCCCccceeCHHHhc-CCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHc--ccCccCCC---
Confidence 1 12355666553 4567899999999999999997 99999764432221111111 00000000
Q ss_pred ccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhh
Q 004637 682 PSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSI 725 (740)
Q Consensus 682 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (740)
....++.+++.+||+.||++|||+.||++.|+++.
T Consensus 339 ---------~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 339 ---------FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ---------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 11245679999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=336.00 Aligned_cols=249 Identities=19% Similarity=0.319 Sum_probs=190.5
Q ss_pred HhcCCCCCCeeecCCCccEEEEEe------cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceeeeec
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~ 520 (740)
..++|++.+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+++++.+ +|||||+++++|.
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~--- 109 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT--- 109 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec---
Confidence 345688899999999999999963 235689999997543 23345788999999999 8999999999885
Q ss_pred cCCCCCCCceEEEEecccCcchhhhcccccC-------------------------------------------------
Q 004637 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------------------------------------------------- 551 (740)
Q Consensus 521 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~------------------------------------------------- 551 (740)
.++..++|||||++|+|.++++....
T Consensus 110 -----~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (375)
T cd05104 110 -----VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKAD 184 (375)
T ss_pred -----cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccc
Confidence 34558999999999999999864210
Q ss_pred -----------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 552 -----------------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 552 -----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
...++|..+..++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 261 (375)
T cd05104 185 KRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLA 261 (375)
T ss_pred cccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccc
Confidence 1247889999999999999999998 79999999999999999999999999998
Q ss_pred CCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccch-hHHHHHHhhhcCCcc
Q 004637 609 LPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDG-LKLQLETCLAEAPSK 675 (740)
Q Consensus 609 ~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~-~~~~~~~~~~~~~~~ 675 (740)
+..... ...+.+||... ...++.++|||||||++|||+| |..||....... ....+......
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---- 336 (375)
T cd05104 262 RDIRNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM---- 336 (375)
T ss_pred eeccCcccccccCCCCCCcceeChhHhc-CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC----
Confidence 533211 11245555543 4567899999999999999998 888987543322 12221111000
Q ss_pred cccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 676 ~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
..+ .....++.+++.+||+.||++||++.||++.|+..
T Consensus 337 ----~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 337 ----LSP-------ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ----CCC-------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 000 01124567999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=329.43 Aligned_cols=247 Identities=19% Similarity=0.262 Sum_probs=194.6
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+++++.++||||+++++++. .
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~--------~ 72 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ--------D 72 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE--------c
Confidence 46888999999999999999965 58999999998542 223457889999999999999999998874 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
++..|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 73 DEYLYLAMEYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred CCEEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCc
Confidence 4568999999999999999953 4568899999999999999999998 799999999999999999999999999
Q ss_pred CCCCCC------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 607 IPLPSK------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 607 la~~~~------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
++.... .++..+.+||.... ..++.++|||||||++|||++|+.||......+....+........ .....
T Consensus 147 ~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~ 223 (333)
T cd05600 147 LSKGIVTYANSVVGSPDYMAPEVLRG-KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQ--RPVYD 223 (333)
T ss_pred CCcccccccCCcccCccccChhHhcC-CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccccc--CCCCC
Confidence 986432 24455667776653 4778999999999999999999999987655443333322111000 00000
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
++ ......++.+++.+|+..+|++||++.|++++
T Consensus 224 ~~------~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 224 DP------RFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cc------ccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00 01223456789999999999999999999975
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=319.87 Aligned_cols=245 Identities=19% Similarity=0.320 Sum_probs=191.5
Q ss_pred cCCCCCCeeecCCCccEEEEEec----CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
++|++.+.||+|+||.||+|.+. .+..||+|.++... ......+.+|+.++++++||||++++|++.
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-------- 76 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-------- 76 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe--------
Confidence 46788899999999999999753 35689999987543 223457899999999999999999999875
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.++..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+|++||
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~df 151 (266)
T cd05064 77 RGNTMMIVTEYMSNGALDSFLRK--HEGQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGF 151 (266)
T ss_pred cCCCcEEEEEeCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCC
Confidence 34568999999999999999964 23468999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCCC----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCc
Q 004637 606 NIPLPSKK----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPS 674 (740)
Q Consensus 606 Gla~~~~~----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 674 (740)
|.+..... +...+.+||... ...++.++|||||||++||+++ |+.||...........+... ..
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~---~~- 226 (266)
T cd05064 152 RRLQEDKSEAIYTTMSGKSPVLWAAPEAIQ-YHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG---FR- 226 (266)
T ss_pred cccccccccchhcccCCCCceeecCHHHHh-hCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC---CC-
Confidence 98643211 112244555543 4567889999999999999775 99999865544333332211 00
Q ss_pred ccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 675 KLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 675 ~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
. ..+..++..+.+++.+||+.+|++||++.|+.+.|+.+
T Consensus 227 -------~----~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 -------L----PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -------C----CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0 01112334577999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=329.73 Aligned_cols=233 Identities=18% Similarity=0.217 Sum_probs=185.0
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
+.||+|+||.||+|+. .+|+.||+|+++... ......+.+|++++++++||||+++++++. .++..|+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~--------~~~~~~l 72 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ--------THDRLCF 72 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE--------cCCEEEE
Confidence 4699999999999985 568999999998542 223356788999999999999999998774 3456899
Q ss_pred EEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCC
Q 004637 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 612 (740)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 73 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 73 VMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 9999999999999853 4568999999999999999999999 799999999999999999999999999985321
Q ss_pred ---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCcc
Q 004637 613 ---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683 (740)
Q Consensus 613 ---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
.++..+.+||... ...++.++|||||||++|||+||+.||...+.......+..... ....
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~----~~p~----- 216 (323)
T cd05571 147 SDGATMKTFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI----RFPR----- 216 (323)
T ss_pred cCCCcccceecCccccChhhhc-CCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC----CCCC-----
Confidence 1344566666654 45678999999999999999999999986554433332221111 1111
Q ss_pred ccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 004637 684 VRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 684 l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 720 (740)
.....+.+++.+||+.||++|| ++.|++++
T Consensus 217 -------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 217 -------TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred -------CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 1124566899999999999999 79998864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-37 Score=328.13 Aligned_cols=259 Identities=17% Similarity=0.268 Sum_probs=193.9
Q ss_pred hcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.++|++.+.||+|+||.||+++.. ++..||+|.++... ....+.+.+|++++++++||||+++++++. .+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~ 75 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY--------SD 75 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE--------EC
Confidence 367899999999999999999954 68899999987542 223467999999999999999999999885 23
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
+..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 76 GEISICMEHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred CEEEEEeecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 568999999999999999953 34588999999999999999999972 3699999999999999999999999999
Q ss_pred CCCCC-------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 608 PLPSK-------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 608 a~~~~-------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
+.... .++..+.+||... ...++.++|||||||++|||+||+.||...+...+...+...............
T Consensus 151 ~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (331)
T cd06649 151 SGQLIDSMANSFVGTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSI 229 (331)
T ss_pred cccccccccccCCCCcCcCCHhHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCcccc
Confidence 85332 2344466666654 446788999999999999999999999765443332222110000000000000
Q ss_pred ----------------C--c-------------cccCCC-cHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 681 ----------------D--P-------------SVRGTY-AYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 681 ----------------~--~-------------~l~~~~-~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
+ + ...... .......+.+++.+||+.||++|||+.|++++.-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 230 SPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred CcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 0 0 000000 0112346789999999999999999999998754
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=330.53 Aligned_cols=239 Identities=21% Similarity=0.283 Sum_probs=189.6
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++. .
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~ 89 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ--------D 89 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE--------c
Confidence 56888999999999999999954 68999999997542 233457889999999999999999999875 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
++..++||||+++|+|.+++.. ...+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 90 ~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg 163 (329)
T PTZ00263 90 ENRVYFLLEFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFG 163 (329)
T ss_pred CCEEEEEEcCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeecc
Confidence 4568999999999999999953 4568888999999999999999999 799999999999999999999999999
Q ss_pred CCCCCCC------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 607 IPLPSKK------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 607 la~~~~~------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
+++.... ++..+.+||... ...++.++|||||||++|||+||+.||...........+..... .....+
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~----~~p~~~ 238 (329)
T PTZ00263 164 FAKKVPDRTFTLCGTPEYLAPEVIQ-SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL----KFPNWF 238 (329)
T ss_pred CceEcCCCcceecCChhhcCHHHHc-CCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc----CCCCCC
Confidence 9864322 344456666654 45568899999999999999999999986544333222221111 111111
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS-----IEDVLWN 720 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 720 (740)
...+.+++.+||+.||++||+ ++|++.+
T Consensus 239 ------------~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 239 ------------DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred ------------CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 134569999999999999996 6888755
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=341.15 Aligned_cols=265 Identities=15% Similarity=0.215 Sum_probs=194.2
Q ss_pred HhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ....+|+.++++++|||||++++++.....+.....
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 346799999999999999999995 468899999886432 345679999999999999999998754332222233
Q ss_pred CceEEEEecccCcchhhhcccc-cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC-ceeEecC
Q 004637 528 STVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGY 605 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~-~~kl~DF 605 (740)
..+++||||+++ +|.+++... .....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeecc
Confidence 457899999985 787776532 234568999999999999999999999 7999999999999999664 7999999
Q ss_pred CCCCCCC--------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc-
Q 004637 606 NIPLPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL- 676 (740)
Q Consensus 606 Gla~~~~--------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~- 676 (740)
|+++... .++..+.+||.......++.++|||||||++|||+||++||.+.........+.......+...
T Consensus 216 Gla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~ 295 (440)
T PTZ00036 216 GSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQL 295 (440)
T ss_pred ccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 9986432 2334467778766666789999999999999999999999987544332222222111111000
Q ss_pred ------------ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 677 ------------RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 677 ------------~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.......+...++.....++.+++.+||+.||++|||+.|++++-
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp 352 (440)
T PTZ00036 296 KEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADP 352 (440)
T ss_pred HHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCCh
Confidence 000001111112222345678999999999999999999999654
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=325.18 Aligned_cols=248 Identities=19% Similarity=0.335 Sum_probs=192.2
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCC----EEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGS----RVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
.+|++.+.||+|+||.||+|++. +++ .||+|.++... ....+++.+|+.+++.++||||++++|+|..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~------ 80 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 80 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC------
Confidence 46888999999999999999853 343 48999987442 2345678999999999999999999998852
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
...++|+||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|
T Consensus 81 ---~~~~~v~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~D 152 (316)
T cd05108 81 ---STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITD 152 (316)
T ss_pred ---CCceeeeecCCCCCHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEcc
Confidence 236899999999999999964 23458899999999999999999998 7999999999999999999999999
Q ss_pred CCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcC
Q 004637 605 YNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 605 FGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
||+++..... ...+.+||+.. ...++.++|||||||++|||+| |+.||................
T Consensus 153 fG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~-~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~--- 228 (316)
T cd05108 153 FGLAKLLGADEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE--- 228 (316)
T ss_pred ccccccccCCCcceeccCCccceeecChHHhc-cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCC---
Confidence 9998643221 11244555543 4567889999999999999998 999997654433322221110
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhcc
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQ 728 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (740)
... . +..+...+.+++.+||+.||++||++.|++..+....+.+
T Consensus 229 --~~~---~-------~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 229 --RLP---Q-------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred --CCC---C-------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 000 0 0112235678999999999999999999999998776544
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=313.88 Aligned_cols=242 Identities=18% Similarity=0.300 Sum_probs=191.0
Q ss_pred cCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
++|++.+.||+|+||.||+|+..++..+|+|.++... ...+++.+|++++++++||||+++++++. .+...
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~ 74 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCT--------QQKPL 74 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEc--------cCCCE
Confidence 3577789999999999999998888899999886432 33567899999999999999999999874 34558
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
++||||+++|+|.++++. ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+|++|||.++.
T Consensus 75 ~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~ 149 (256)
T cd05114 75 YIVTEFMENGCLLNYLRQ--RQGKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRY 149 (256)
T ss_pred EEEEEcCCCCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccc
Confidence 999999999999999864 23458999999999999999999998 7999999999999999999999999998854
Q ss_pred CCC----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 611 SKK----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 611 ~~~----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
... +...+.+||... ...++.++||||||+++|||++ |+.||...........+......
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~-------- 220 (256)
T cd05114 150 VLDDEYTSSSGAKFPVKWSPPEVFN-FSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRL-------- 220 (256)
T ss_pred cCCCceeccCCCCCchhhCChhhcc-cCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC--------
Confidence 321 111244555543 4467889999999999999999 89999765544333333221100
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
..+. .....+.+++.+||+.+|++||+++|+++.|.
T Consensus 221 ~~~~-------~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 221 YRPK-------LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred CCCC-------CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0111 11235679999999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-38 Score=327.28 Aligned_cols=254 Identities=18% Similarity=0.309 Sum_probs=204.2
Q ss_pred HHHHHHhcCCCCCCeeecCCCccEEEEEecC-CCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccC
Q 004637 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (740)
Q Consensus 444 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~ 522 (740)
++++--..+....++||-|.||.||.|.++. .-.||||.++.+.. ..++|+.|..+|+.++|||+|+++|+|.
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT----- 333 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT----- 333 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhc-----
Confidence 4454444556667899999999999999765 66899999985543 4578999999999999999999999996
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeE
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl 602 (740)
....+|||+|||..|+|.+||++. ....++.-..+.++.||+.|+.||.. +++|||||..+|+|+.++..+||
T Consensus 334 ---~EpPFYIiTEfM~yGNLLdYLRec-nr~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKv 406 (1157)
T KOG4278|consen 334 ---HEPPFYIITEFMCYGNLLDYLREC-NRSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKV 406 (1157)
T ss_pred ---cCCCeEEEEecccCccHHHHHHHh-chhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEe
Confidence 234489999999999999999863 34457777789999999999999998 89999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCcccc----------ccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhc
Q 004637 603 SGYNIPLPSKKGLESPLRG----------QYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAE 671 (740)
Q Consensus 603 ~DFGla~~~~~~~~~~~~~----------~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 671 (740)
+|||+++.....+....+| |- .....++.|+|||+|||+|||+.| |..||.+.+..++...+...
T Consensus 407 ADFGLsRlMtgDTYTAHAGAKFPIKWTAPEs-LAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg--- 482 (1157)
T KOG4278|consen 407 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPES-LAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG--- 482 (1157)
T ss_pred eccchhhhhcCCceecccCccCcccccCccc-ccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc---
Confidence 9999998765544433322 22 223456789999999999999998 88999876654444333222
Q ss_pred CCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 672 ~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
.+.+.+..|+.++++||..||+++|.+||++.|+-+.++-+.+
T Consensus 483 ------------yRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 483 ------------YRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred ------------ccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 2233445567788999999999999999999999999986653
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-37 Score=320.79 Aligned_cols=255 Identities=16% Similarity=0.234 Sum_probs=189.9
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++. .+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~ 72 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR--------RR 72 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe--------cC
Confidence 46889999999999999999964 68899999997542 233467889999999999999999998874 34
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
+..++||||++++.+..+.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 73 ~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 73 GKLYLVFEYVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred CEEEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 56899999999877765542 23468899999999999999999998 7999999999999999999999999999
Q ss_pred CCCCCC----------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcc--
Q 004637 608 PLPSKK----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK-- 675 (740)
Q Consensus 608 a~~~~~----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~-- 675 (740)
+..... ++..+.+||... ...++.++|||||||++|||++|+.||......+....+.......+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
T cd07848 147 ARNLSEGSNANYTEYVATRWYRSPELLL-GAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQM 225 (287)
T ss_pred cccccccccccccccccccccCCcHHHc-CCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHH
Confidence 864321 233456666654 3457889999999999999999999998654332222222211111100
Q ss_pred --------cccccCcccc------CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 676 --------LRAEADPSVR------GTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 --------~~~~~~~~l~------~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
......+... ..+.......+.+++.+|++.||++|||++|++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 226 KLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred HhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 00111234568899999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-37 Score=330.71 Aligned_cols=241 Identities=19% Similarity=0.285 Sum_probs=183.5
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
+|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++|+||+++++++. .++.
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~~ 146 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFD--------HNGE 146 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEec--------cCCe
Confidence 345578999999999999995 4689999999965432 23467899999999999999999999874 3456
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++|+|.+.. ...+..+..++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+++
T Consensus 147 ~~lv~e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~ 216 (353)
T PLN00034 147 IQVLLEFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSR 216 (353)
T ss_pred EEEEEecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccce
Confidence 89999999999986543 24567788999999999999998 799999999999999999999999999985
Q ss_pred CCC---------CCCCCccccccccC----CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 610 PSK---------KGLESPLRGQYVSN----QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 610 ~~~---------~~~~~~~~~~~~~~----~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
... .++..|.+||.+.. ....+.++|||||||++|||++|+.||......+....+.......+...
T Consensus 217 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 296 (353)
T PLN00034 217 ILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEA 296 (353)
T ss_pred ecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCC
Confidence 432 23444666765432 23345689999999999999999999974433332222222111111011
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
......++.+++.+||+.||++||++.|++++--
T Consensus 297 ------------~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~ 330 (353)
T PLN00034 297 ------------PATASREFRHFISCCLQREPAKRWSAMQLLQHPF 330 (353)
T ss_pred ------------CCccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 1122345679999999999999999999998643
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=329.84 Aligned_cols=260 Identities=17% Similarity=0.254 Sum_probs=189.5
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|+||.||+|+. .+++.||||+++... ......+.+|++++++++||||+++++++..... ....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~---~~~~ 77 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR---REFK 77 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCC---CCCc
Confidence 477889999999999999994 568999999987432 2233568899999999999999999998753221 2234
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..|+|||||. ++|.+++. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 78 ~~~lv~e~~~-~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 78 DIYVVFELME-SDLHQVIK---ANDDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred eEEEEEecCC-CCHHHHHH---hcccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccc
Confidence 5899999996 68999885 34468999999999999999999999 79999999999999999999999999998
Q ss_pred CCCC------------CCCCCccccccccC-CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcc
Q 004637 609 LPSK------------KGLESPLRGQYVSN-QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 609 ~~~~------------~~~~~~~~~~~~~~-~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
+... .++..+.+||.... ...++.++|||||||++|||+||+.||...+.......+.......+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd07859 151 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE 230 (338)
T ss_pred cccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 6321 13334556665432 2467889999999999999999999997654332222221111111100
Q ss_pred ccc------------ccCccccCCCc---HHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 676 LRA------------EADPSVRGTYA---YDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 676 ~~~------------~~~~~l~~~~~---~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
... ...+....... ......+.+++.+||+.||++|||++|++++-
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp 291 (338)
T cd07859 231 TISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291 (338)
T ss_pred HHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence 000 00000000000 01124567999999999999999999999763
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=326.32 Aligned_cols=243 Identities=18% Similarity=0.242 Sum_probs=187.5
Q ss_pred CCCCCCeeecCCCccEEEEEe----cCCCEEEEEEeeccc----ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~ 522 (740)
+|++.+.||+|+||.||+++. .+++.||+|+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ----- 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe-----
Confidence 477889999999999999984 358899999997532 22345678899999999 5999999987764
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeE
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl 602 (740)
.++..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||
T Consensus 76 ---~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 76 ---TEAKLHLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred ---cCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEE
Confidence 34568999999999999999853 4568999999999999999999998 79999999999999999999999
Q ss_pred ecCCCCCCCC----------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC
Q 004637 603 SGYNIPLPSK----------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 603 ~DFGla~~~~----------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
+|||+++... .++..+.+||.......++.++|||||||++|||+||+.||...........+.......
T Consensus 147 ~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~ 226 (332)
T cd05614 147 TDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKC 226 (332)
T ss_pred eeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC
Confidence 9999985321 234456677776655567889999999999999999999997543322222222211111
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 720 (740)
....... ....+.+++.+||+.||++|| +++|++++
T Consensus 227 ~~~~~~~------------~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 227 DPPFPSF------------IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCCCCCC------------CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 1111111 123456899999999999999 77788764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=317.39 Aligned_cols=257 Identities=21% Similarity=0.295 Sum_probs=190.3
Q ss_pred CCCCeeecCCCccEEEEEe-----cCCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 454 DPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 454 ~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
+..+.||+|+||+||++.. .+++.||+|.++.... .....+.+|++++++++||||+++++++... ..
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~ 80 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ------GG 80 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC------CC
Confidence 7889999999999988652 3578999999875432 2346788999999999999999999987521 23
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
...++||||+++|+|.+++.. ..+++.++..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~ 153 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGL 153 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeeccc
Confidence 458999999999999999853 348999999999999999999998 7999999999999999999999999999
Q ss_pred CCCCCCC------------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhh-hcCCc
Q 004637 608 PLPSKKG------------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCL-AEAPS 674 (740)
Q Consensus 608 a~~~~~~------------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~-~~~~~ 674 (740)
++....+ ...+.+||... ...++.++|||||||++|||+||+.|+...... ......... .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~ 231 (283)
T cd05080 154 AKAVPEGHEYYRVREDGDSPVFWYAVECLK-ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK-FEEMIGPKQGQMTVV 231 (283)
T ss_pred ccccCCcchhhccCCCCCCCceeeCHhHhc-ccCCCcccccHHHHHHHHHHHhCCCCCCCCcch-hhhhhcccccccchh
Confidence 8643321 11233444433 455788999999999999999999998643211 111110000 00000
Q ss_pred ccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhh
Q 004637 675 KLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSI 725 (740)
Q Consensus 675 ~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (740)
...+..+.......+.....++.+++.+||+.||++|||++++++.|+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 232 RLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111111111111122334567889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=313.80 Aligned_cols=245 Identities=18% Similarity=0.339 Sum_probs=193.7
Q ss_pred hcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.++|++.++||+|+||.||+|...+++.||+|.+.... ...+.+.+|+.++++++|+||+++++++. .++.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~ 75 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT--------KEEP 75 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEc--------CCCC
Confidence 35688899999999999999998888899999886433 23568899999999999999999998764 3455
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++|+|.++++.. ....+++.+++.++.|+++||+|||+ .+++||||||+||+++.++.+||+|||.+.
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~ 151 (261)
T cd05072 76 IYIITEYMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLAR 151 (261)
T ss_pred cEEEEecCCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccce
Confidence 89999999999999999642 34468899999999999999999998 799999999999999999999999999986
Q ss_pred CCCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 610 PSKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 610 ~~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
..... ...+.+||+.. ...++.++|||||||++|||+| |+.||...........+..... .
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-~------ 223 (261)
T cd05072 152 VIEDNEYTAREGAKFPIKWTAPEAIN-FGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR-M------ 223 (261)
T ss_pred ecCCCceeccCCCccceecCCHHHhc-cCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-C------
Confidence 43221 11244555543 3456789999999999999999 9999976554433333221110 0
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
+ . ......++.+++.+||..+|++||+++++.+.|+.
T Consensus 224 ---~-~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 224 ---P-R----MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ---C-C----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0 0 01122456799999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=328.57 Aligned_cols=239 Identities=18% Similarity=0.238 Sum_probs=189.0
Q ss_pred cCCCCCCeeecCCCccEEEEEecC--CCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTD--GSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~--g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
++|++.+.||+|+||.||+|+... +..||+|++.... ....+.+.+|+++++.++||||+++++++.
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-------- 101 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK-------- 101 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE--------
Confidence 568889999999999999998543 3689999997542 233457889999999999999999999885
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.++..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 102 ~~~~~~lv~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DF 175 (340)
T PTZ00426 102 DESYLYLVLEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDF 175 (340)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecC
Confidence 34568999999999999999953 4468899999999999999999999 79999999999999999999999999
Q ss_pred CCCCCCC------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 606 NIPLPSK------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 606 Gla~~~~------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
|+++... .++..+.+||... ...++.++|||||||++|||+||+.||...+.......+..... .....
T Consensus 176 G~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~----~~p~~ 250 (340)
T PTZ00426 176 GFAKVVDTRTYTLCGTPEYIAPEILL-NVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII----YFPKF 250 (340)
T ss_pred CCCeecCCCcceecCChhhcCHHHHh-CCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC----CCCCC
Confidence 9986432 2344466666654 45578899999999999999999999986554333222221111 11111
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 720 (740)
+ ...+.+++.+|++.||++|+ +++|++++
T Consensus 251 ~------------~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 251 L------------DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred C------------CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 1 13455899999999999995 89998875
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=318.52 Aligned_cols=238 Identities=30% Similarity=0.476 Sum_probs=179.2
Q ss_pred CCeeecCCCccEEEEEec-----CCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 456 TNLIGEGSQGQLYKGFLT-----DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.+.||.|+||.||+|.+. .+..|+||.++.... ...+.+.+|++.+++++||||++++|+|. ..+.
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~--------~~~~ 75 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI--------ENEP 75 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE--------SSSS
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccc--------cccc
Confidence 468999999999999976 256899999965322 23578999999999999999999999996 2234
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++|+|.++|+.. ....+++..+..|+.|+++||+|||+ .+|+|+||+++||++++++.+||+|||++.
T Consensus 76 ~~lv~e~~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~ 151 (259)
T PF07714_consen 76 LFLVMEYCPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSR 151 (259)
T ss_dssp EEEEEE--TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGE
T ss_pred cccccccccccccccccccc-cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence 89999999999999999752 24678999999999999999999999 699999999999999999999999999985
Q ss_pred CCCC-----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 610 PSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 610 ~~~~-----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
.... ....+.+||... ...++.++||||||+++|||+| |+.|+...........+.......
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~----- 225 (259)
T PF07714_consen 152 PISEKSKYKNDSSQQLPLRYLAPEVLK-DGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP----- 225 (259)
T ss_dssp ETTTSSSEEESTTSESGGGGS-HHHHH-HSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT-----
T ss_pred ccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccce-----
Confidence 4411 112234444433 2346889999999999999999 788887654444333332111100
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.+..+...+.+++.+||+.||++||++.|+++.|
T Consensus 226 ----------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 ----------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----------eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1111234567999999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=319.59 Aligned_cols=257 Identities=18% Similarity=0.268 Sum_probs=189.3
Q ss_pred hcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.++|++.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|++++++++||||+++++++. .+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--------~~ 75 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIH--------TK 75 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEe--------cC
Confidence 367999999999999999999954 689999999975432 23356789999999999999999999874 34
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
...++||||++ ++|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 76 ~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 149 (303)
T cd07869 76 ETLTLVFEYVH-TDLCQYMDK--HPGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGL 149 (303)
T ss_pred CeEEEEEECCC-cCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCc
Confidence 56899999996 588888753 33558889999999999999999999 7999999999999999999999999999
Q ss_pred CCCCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccc-hhHHHHHHhhhcCC-ccc
Q 004637 608 PLPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVD-GLKLQLETCLAEAP-SKL 676 (740)
Q Consensus 608 a~~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~-~~~ 676 (740)
+.... .++..+.+||.......++.++||||+||++|||+||+.||.+.... .....+........ ..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (303)
T cd07869 150 ARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTW 229 (303)
T ss_pred ceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhc
Confidence 75321 12344667776655567788999999999999999999999854321 11111111111000 000
Q ss_pred cc-----ccCc---------cccCCCc-HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 677 RA-----EADP---------SVRGTYA-YDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 677 ~~-----~~~~---------~l~~~~~-~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.. ..++ .+...+. ......+.+++.+|++.||++|||+.|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 230 PGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00 0000 0000000 0012356799999999999999999999864
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=314.81 Aligned_cols=247 Identities=21% Similarity=0.365 Sum_probs=197.1
Q ss_pred HhcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+..+|++.+.||+|+||.||+|...+++.+|+|.++.........+.+|++++++++||||+++++++. ...
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~ 75 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS--------VGE 75 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEe--------cCC
Confidence 456688899999999999999998889999999998665545678999999999999999999999875 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++|+|.++++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||.+
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~ 151 (261)
T cd05148 76 PVYIITELMEKGSLLAFLRSP-EGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLA 151 (261)
T ss_pred CeEEEEeecccCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccch
Confidence 589999999999999999753 34568999999999999999999998 79999999999999999999999999998
Q ss_pred CCCCCC---------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 609 LPSKKG---------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 609 ~~~~~~---------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
...... ...+.+||... ...++.++||||||+++|||++ |+.||...........+... ...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~PE~~~-~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~---~~~---- 223 (261)
T cd05148 152 RLIKEDVYLSSDKKIPYKWTAPEAAS-HGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG---YRM---- 223 (261)
T ss_pred hhcCCccccccCCCCceEecCHHHHc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC---CcC----
Confidence 543221 11234455443 4567889999999999999998 89999765543333332211 100
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
..+......+.+++.+||+.||++|||+.|+++.|+.
T Consensus 224 --------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 224 --------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 0111223456799999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=324.37 Aligned_cols=233 Identities=19% Similarity=0.232 Sum_probs=184.0
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
+.||+|+||.||+++. .+++.||||+++... ......+.+|+++++.++||||+++++++. .++..++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~~~~~~l 72 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ--------TKDRLCF 72 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE--------cCCEEEE
Confidence 4699999999999994 568999999997542 223457888999999999999999998774 3456899
Q ss_pred EEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCC
Q 004637 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 612 (740)
||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 73 v~Ey~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 73 VMEYVNGGELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred EEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 9999999999998853 4568999999999999999999998 799999999999999999999999999985421
Q ss_pred ---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCcc
Q 004637 613 ---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683 (740)
Q Consensus 613 ---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
.++..+.+||... ...++.++|||||||++|||+||+.||...+.......+..... .+..
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~----~~p~----- 216 (328)
T cd05593 147 TDAATMKTFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI----KFPR----- 216 (328)
T ss_pred CcccccccccCCcCccChhhhc-CCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc----cCCC-----
Confidence 1344456666654 45678999999999999999999999976544333222211100 1111
Q ss_pred ccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 004637 684 VRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 684 l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 720 (740)
.....+.+++.+||+.||++|| ++.|++++
T Consensus 217 -------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 217 -------TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred -------CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 1123456899999999999997 89999865
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=314.60 Aligned_cols=251 Identities=19% Similarity=0.285 Sum_probs=190.5
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCC----EEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGS----RVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~----~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
++|++.+.||+|+||+||+|++ .+++ .|++|.+..... ....++..|+.++++++||||++++|++.
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~------- 79 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP------- 79 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-------
Confidence 4577789999999999999985 3454 477777753322 22356778888999999999999999873
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
+...++++||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|
T Consensus 80 --~~~~~~i~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~D 152 (279)
T cd05111 80 --GASLQLVTQLSPLGSLLDHVRQ--HRDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIAD 152 (279)
T ss_pred --CCccEEEEEeCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcC
Confidence 2336899999999999999964 34568999999999999999999998 7999999999999999999999999
Q ss_pred CCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcC
Q 004637 605 YNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 605 FGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
||+++..... ...+.+||... ...++.++|||||||++|||+| |+.||.+.........+......
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~-~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~- 230 (279)
T cd05111 153 FGVADLLYPDDKKYFYSEHKTPIKWMALESIL-FGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERL- 230 (279)
T ss_pred CccceeccCCCcccccCCCCCcccccCHHHhc-cCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC-
Confidence 9998533211 11244455443 3457899999999999999998 99999865544333332211100
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhccccc
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQEGW 731 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 731 (740)
..+. .+...+.+++.+||..||++|||+.|+++.|..+.+-+.+|
T Consensus 231 -------~~~~-------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~~~ 275 (279)
T cd05111 231 -------AQPQ-------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPPRY 275 (279)
T ss_pred -------CCCC-------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCcce
Confidence 0111 11234568999999999999999999999999877655443
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=323.05 Aligned_cols=231 Identities=19% Similarity=0.243 Sum_probs=181.2
Q ss_pred eecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEE
Q 004637 459 IGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (740)
Q Consensus 459 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~ 534 (740)
||+|+||.||+|+.. +++.||+|+++... ......+.+|++++++++||||+++++++. .++..++||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~~~~lv~ 72 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ--------SPEKLYLVL 72 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe--------cCCeEEEEE
Confidence 699999999999954 58899999997532 233456788999999999999999998774 345689999
Q ss_pred ecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCC--
Q 004637 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK-- 612 (740)
Q Consensus 535 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~-- 612 (740)
||+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 73 e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 73 AFINGGELFHHLQR---EGRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred cCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 99999999999953 4568999999999999999999998 799999999999999999999999999986421
Q ss_pred -------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCcccc
Q 004637 613 -------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVR 685 (740)
Q Consensus 613 -------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 685 (740)
.++..+.+||... ...++.++|||||||++|||+||+.||...........+. . .+......
T Consensus 147 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~---~-~~~~~~~~------ 215 (312)
T cd05585 147 DDKTNTFCGTPEYLAPELLL-GHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL---Q-EPLRFPDG------ 215 (312)
T ss_pred CCccccccCCcccCCHHHHc-CCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHH---c-CCCCCCCc------
Confidence 1344466666654 4567899999999999999999999998654433322221 1 11111111
Q ss_pred CCCcHHHHHHHHHHHHhccccCCCCCCC---HHHHHHH
Q 004637 686 GTYAYDSLRTTVEITINCLSKDAAKRPS---IEDVLWN 720 (740)
Q Consensus 686 ~~~~~~~~~~~~~li~~cl~~dP~~RPs---~~evl~~ 720 (740)
....+.+++.+||+.||++||+ +.|++.+
T Consensus 216 ------~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 216 ------FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred ------CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 1234569999999999999975 5666653
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=325.19 Aligned_cols=251 Identities=20% Similarity=0.332 Sum_probs=192.6
Q ss_pred hcCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceeeeecc
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~ 521 (740)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++.++ +|+||++++++|..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~--- 82 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK--- 82 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec---
Confidence 457889999999999999999732 24789999987432 22235678899999999 89999999998852
Q ss_pred CCCCCCCceEEEEecccCcchhhhcccccC--------------------------------------------------
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------------------------------------------- 551 (740)
Q Consensus 522 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~-------------------------------------------------- 551 (740)
.+..++++|||+++|+|.+++.....
T Consensus 83 ----~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (337)
T cd05054 83 ----PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEE 158 (337)
T ss_pred ----CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhccc
Confidence 34568999999999999998853211
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCC----------
Q 004637 552 --------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK---------- 613 (740)
Q Consensus 552 --------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~---------- 613 (740)
...++|..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 159 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~ 235 (337)
T cd05054 159 DEEGDELYKEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 235 (337)
T ss_pred chhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCC
Confidence 1368999999999999999999998 7999999999999999999999999999864321
Q ss_pred -CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchh-HHHHHHhhhcCCcccccccCccccCCCcH
Q 004637 614 -GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGL-KLQLETCLAEAPSKLRAEADPSVRGTYAY 690 (740)
Q Consensus 614 -~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 690 (740)
+...+.+||+.. ...++.++|||||||++|||++ |+.||......+. ...+... . .... +.
T Consensus 236 ~~~~~y~aPE~~~-~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~----~~~~--------~~ 299 (337)
T cd05054 236 RLPLKWMAPESIF-DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEG---T----RMRA--------PE 299 (337)
T ss_pred CCCccccCcHHhc-CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhcc---C----CCCC--------Cc
Confidence 112355666554 4567889999999999999998 9999975432221 1111110 0 0000 11
Q ss_pred HHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 691 DSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 691 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
.....+.+++.+||+.+|++||++.|+++.|+.+.+
T Consensus 300 ~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 300 YATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 123457799999999999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=330.61 Aligned_cols=243 Identities=16% Similarity=0.239 Sum_probs=185.5
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.|+..+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|++++++++||||+++++++. ++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~--------~~ 73 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ--------DK 73 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe--------cC
Confidence 578889999999999999984 568899999997542 223457889999999999999999998875 34
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++++||+|||+
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 74 DNLYFVMDYIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred CEEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 569999999999999999853 4468899999999999999999998 7999999999999999999999999998
Q ss_pred CCCC--------------------------------------------------------CCCCCCccccccccCCCCCC
Q 004637 608 PLPS--------------------------------------------------------KKGLESPLRGQYVSNQPGDG 631 (740)
Q Consensus 608 a~~~--------------------------------------------------------~~~~~~~~~~~~~~~~~~~~ 631 (740)
++.. ..++..|.+||... ...++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~ 226 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLL-RKGYT 226 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHc-CCCCC
Confidence 6421 12334456666654 35578
Q ss_pred CccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHh--ccccCCC
Q 004637 632 AKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITIN--CLSKDAA 709 (740)
Q Consensus 632 ~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~--cl~~dP~ 709 (740)
.++|||||||++|||+||+.||...........+... ........ ......++.+++.+ |+..+|.
T Consensus 227 ~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~----------~~~~s~~~~dli~~ll~~~~~~~ 294 (381)
T cd05626 227 QLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINW--ENTLHIPP----------QVKLSPEAVDLITKLCCSAEERL 294 (381)
T ss_pred CccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcc--ccccCCCC----------CCCCCHHHHHHHHHHccCccccc
Confidence 9999999999999999999999865543322221110 00000000 00112345577776 6667777
Q ss_pred CCCCHHHHHHHh
Q 004637 710 KRPSIEDVLWNL 721 (740)
Q Consensus 710 ~RPs~~evl~~L 721 (740)
+||++.|++++-
T Consensus 295 ~R~~~~~~l~hp 306 (381)
T cd05626 295 GRNGADDIKAHP 306 (381)
T ss_pred CCCCHHHHhcCc
Confidence 799999998753
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=325.46 Aligned_cols=234 Identities=23% Similarity=0.319 Sum_probs=196.5
Q ss_pred HhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecc---cccChhHHHHHHHHHhhcc-CcccceeeceeeeeccCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDH 523 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~ 523 (740)
..++|...++||+|+||+|+++.. .+++.+|||++++. ..+..+..+.|.+|+.... ||.++.++..|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f------- 438 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF------- 438 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-------
Confidence 457788999999999999999995 46889999999976 3556678889999888884 99999999766
Q ss_pred CCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEe
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~ 603 (740)
.+.+++|+||||+.||++..+. ..+.+++.....|+..|+.||+|||+ .+||+||||-+|||||.+|++||+
T Consensus 439 -QT~~~l~fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiA 510 (694)
T KOG0694|consen 439 -QTKEHLFFVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIA 510 (694)
T ss_pred -ccCCeEEEEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEec
Confidence 4678899999999999965554 34679999999999999999999999 699999999999999999999999
Q ss_pred cCCCCCCC---------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCc
Q 004637 604 GYNIPLPS---------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPS 674 (740)
Q Consensus 604 DFGla~~~---------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 674 (740)
|||+++.. -.|+..+++||... +..|+..+|.|||||+||||+.|+.||.+++.+++...+...-..
T Consensus 511 DFGlcKe~m~~g~~TsTfCGTpey~aPEil~-e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~--- 586 (694)
T KOG0694|consen 511 DFGLCKEGMGQGDRTSTFCGTPEFLAPEVLT-EQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVR--- 586 (694)
T ss_pred ccccccccCCCCCccccccCChhhcChhhhc-cCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCC---
Confidence 99998642 23566677777665 678999999999999999999999999999888887766543222
Q ss_pred ccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCH
Q 004637 675 KLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSI 714 (740)
Q Consensus 675 ~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~ 714 (740)
|+.-...+.++|+.+++.++|++|--+
T Consensus 587 -------------yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 587 -------------YPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -------------CCCcccHHHHHHHHHHhccCcccccCC
Confidence 223334667799999999999999755
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-36 Score=315.76 Aligned_cols=261 Identities=19% Similarity=0.294 Sum_probs=189.7
Q ss_pred cCCCCCCeeecCCCccEEEEEe-c-CCCEEEEEEeeccc--ccChhHHHHHHHHHhhc---cCcccceeeceeeeeccCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-T-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKL---RHRHLVSILGHCILTYQDH 523 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l---~H~nIv~l~g~~~~~~~~~ 523 (740)
++|++.+.||+|+||+||+|+. . +++.||+|+++... ......+.+|+++++.+ +||||++++++|.....
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~-- 78 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT-- 78 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccC--
Confidence 4688999999999999999985 3 46789999987543 22334677888887776 69999999998853221
Q ss_pred CCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEe
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~ 603 (740)
......++||||++ ++|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 79 -~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 79 -DRETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred -CCCCcEEEEEccCC-CCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEc
Confidence 23456899999997 5999998642 23458999999999999999999999 799999999999999999999999
Q ss_pred cCCCCCCCC--------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhh-cCCc
Q 004637 604 GYNIPLPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA-EAPS 674 (740)
Q Consensus 604 DFGla~~~~--------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~ 674 (740)
|||+++... .++..+.+||... ...++.++|||||||++|||++|++||.+....+....+..... ..+.
T Consensus 153 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~ 231 (290)
T cd07862 153 DFGLARIYSFQMALTSVVVTLWYRAPEVLL-QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 231 (290)
T ss_pred cccceEeccCCcccccccccccccChHHHh-CCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChh
Confidence 999985322 1234456666654 45678899999999999999999999987654433333322211 1111
Q ss_pred ccccc-------cCccccC---CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 675 KLRAE-------ADPSVRG---TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 675 ~~~~~-------~~~~l~~---~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
..... ..+.-.. ....+....+.+++.+|++.||++|||+.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 232 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 11100 0000000 0001223456799999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=323.83 Aligned_cols=233 Identities=17% Similarity=0.217 Sum_probs=184.0
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
+.||+|+||.||+++. .+|+.||+|+++... ......+.+|++++++++||||+++++++. .++..|+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~--------~~~~~~l 72 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ--------THDRLCF 72 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEe--------cCCEEEE
Confidence 4699999999999994 568999999998542 223356778999999999999999998774 3456899
Q ss_pred EEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC-
Q 004637 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS- 611 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~- 611 (740)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 v~E~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 73 VMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 9999999999988853 4568999999999999999999998 79999999999999999999999999987532
Q ss_pred --------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCcc
Q 004637 612 --------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683 (740)
Q Consensus 612 --------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
..++..+.+||... ...++.++|||||||++|||++|+.||...+.......+..... ....
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~----~~p~----- 216 (323)
T cd05595 147 SDGATMKTFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI----RFPR----- 216 (323)
T ss_pred CCCCccccccCCcCcCCccccc-CCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC----CCCC-----
Confidence 12344566677654 45678999999999999999999999986554433332221111 1111
Q ss_pred ccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 004637 684 VRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 684 l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 720 (740)
.....+.+++.+||+.||++|| ++.++++.
T Consensus 217 -------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 217 -------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred -------CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 1123456999999999999998 88888764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=330.34 Aligned_cols=242 Identities=17% Similarity=0.247 Sum_probs=187.9
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||+||+|+. .+++.||||+++... ......+.+|+++++.++||||+++++++. .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~--------~ 72 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ--------D 72 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE--------c
Confidence 4788999999999999999995 468999999997542 223456788999999999999999998875 4
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
++..|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 73 ENYLYLIMEYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred CCeEEEEECCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecc
Confidence 5668999999999999999853 4468999999999999999999999 799999999999999999999999999
Q ss_pred CCCCCC-----------------------------------------------CCCCCccccccccCCCCCCCccceehh
Q 004637 607 IPLPSK-----------------------------------------------KGLESPLRGQYVSNQPGDGAKEDVYQL 639 (740)
Q Consensus 607 la~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~ksDVwSf 639 (740)
++.... .++..+.+||... ...++.++|||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSl 225 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFL-QTGYNKECDWWSL 225 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHc-CCCCCCeeeeecc
Confidence 874321 1344455666543 4567899999999
Q ss_pred hHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCC---HHH
Q 004637 640 GVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS---IED 716 (740)
Q Consensus 640 Gvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs---~~e 716 (740)
||++|||++|+.||...........+...... .. .... ......+.+++.+|+. +|.+|++ +.|
T Consensus 226 G~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~----~~--~~~~------~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ 292 (364)
T cd05599 226 GVIMYEMLVGYPPFCSDNPQETYRKIINWKET----LQ--FPDE------VPLSPEAKDLIKRLCC-EAERRLGNNGVNE 292 (364)
T ss_pred hhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCc----cC--CCCC------CCCCHHHHHHHHHHcc-CHhhcCCCCCHHH
Confidence 99999999999999865543332222111100 00 0000 0112345688889986 9999998 999
Q ss_pred HHHH
Q 004637 717 VLWN 720 (740)
Q Consensus 717 vl~~ 720 (740)
++++
T Consensus 293 ll~h 296 (364)
T cd05599 293 IKSH 296 (364)
T ss_pred HhcC
Confidence 8874
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=317.69 Aligned_cols=261 Identities=18% Similarity=0.271 Sum_probs=191.3
Q ss_pred cCCCCCCeeecCCCccEEEEEe-----cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
++|++.+.||+|+||.||+|.. .++..||+|.++.......+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------ 77 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA------ 77 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC------
Confidence 4678889999999999999974 25789999998765544456889999999999999999999987532
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
+....++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~df 152 (284)
T cd05081 78 GRRNLRLVMEYLPYGSLRDYLQK--HRERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDF 152 (284)
T ss_pred CCCceEEEEEecCCCCHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCC
Confidence 23458999999999999999963 23458999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCCCCC------------CCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC-
Q 004637 606 NIPLPSKKGL------------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA- 672 (740)
Q Consensus 606 Gla~~~~~~~------------~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~- 672 (740)
|++....... ..+.+||... ...++.++|||||||++|||++|..|+...... ....+.......
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~~~~~~~~~~~~ 230 (284)
T cd05081 153 GLTKVLPQDKEYYKVREPGESPIFWYAPESLT-ESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FMRMMGNDKQGQM 230 (284)
T ss_pred cccccccCCCcceeecCCCCCceEeeCHHHhc-cCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hhhhccccccccc
Confidence 9986432211 1134455443 445788999999999999999998775432211 000000000000
Q ss_pred -CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 673 -PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 673 -~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
...+.+..........+......+.+++.+||..+|++|||+.||++.|+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 231 IVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred chHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0000000000000011122345677999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=320.50 Aligned_cols=245 Identities=22% Similarity=0.285 Sum_probs=200.6
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
++|...+.+|+|+||.++.++. .+++.+++|.+.... ...++...+|+.++++++|||||.+++.|+ .++
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~-------~~~ 76 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFE-------EDG 76 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchh-------cCC
Confidence 5788899999999999999884 467899999998653 333457889999999999999999998775 234
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
...+|||+||+||++.+.+.+.+ ...+++.++..++.|++.|+.|||+ .+|+|||||+.||+++.+..+||+|||+
T Consensus 77 ~~l~Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGl 152 (426)
T KOG0589|consen 77 QLLCIVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGL 152 (426)
T ss_pred ceEEEEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhh
Confidence 44999999999999999997633 5678999999999999999999997 7999999999999999999999999999
Q ss_pred CCCCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 608 PLPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 608 a~~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
|+... .|+..|+.||... ...|+.|+||||+||++|||++-+++|...+...+...+....... +.
T Consensus 153 aK~l~~~~~~a~tvvGTp~YmcPEil~-d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~P---lp- 227 (426)
T KOG0589|consen 153 AKILNPEDSLASTVVGTPYYMCPEILS-DIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSP---LP- 227 (426)
T ss_pred hhhcCCchhhhheecCCCcccCHHHhC-CCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCC---CC-
Confidence 96432 2455566666554 6678999999999999999999999999888777665554433111 11
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
.....++..++..|+..+|+.||++.+++.+..
T Consensus 228 -----------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~ 260 (426)
T KOG0589|consen 228 -----------SMYSSELRSLVKSMLRKNPEHRPSALELLRRPH 260 (426)
T ss_pred -----------ccccHHHHHHHHHHhhcCCccCCCHHHHhhChh
Confidence 112345568999999999999999999998743
|
|
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=311.79 Aligned_cols=251 Identities=18% Similarity=0.319 Sum_probs=188.1
Q ss_pred CCCCCeeecCCCccEEEEEecC-CC--EEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGFLTD-GS--RVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~~-g~--~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
|.+.+.||+|+||.||+|+..+ +. .||+|.++... ....+.+.+|++++++++||||++++++|...... ...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~~ 78 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVES--EGY 78 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcc--cCC
Confidence 3567899999999999999654 33 68999887542 23346788999999999999999999988532211 123
Q ss_pred CceEEEEecccCcchhhhccccc---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 528 STVFLVLEHISNGSLRDYLTDWK---KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
...++||||+++|+|.+++.... ....+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~D 155 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVAD 155 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECC
Confidence 45799999999999998874211 23458999999999999999999998 7999999999999999999999999
Q ss_pred CCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcC
Q 004637 605 YNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 605 FGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
||+++..... ...+.+||+. ....++.++|||||||++|||++ |+.||...........+... .
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~---~ 231 (272)
T cd05075 156 FGLSKKIYNGDYYRQGRIAKMPVKWIAIESL-ADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG---N 231 (272)
T ss_pred CCcccccCcccceecCCcccCCcccCCHHHc-cCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC---C
Confidence 9998643221 1123334433 24557889999999999999999 88999765433332222211 0
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
. .. . .......+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 232 ~--~~--~--------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 R--LK--Q--------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred C--CC--C--------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 00 0 111234567999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=310.72 Aligned_cols=245 Identities=17% Similarity=0.297 Sum_probs=192.8
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.+|++.+.||+|+||.||+|... +++.||+|+++... ...+++.+|++++++++||||++++++|. .++.
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~ 76 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT--------REPP 76 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEc--------CCCC
Confidence 34677889999999999999954 58899999987432 23467899999999999999999999875 3345
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++|+|.+++... ....+++..++.++.|+++||+|||+ .+++||||||+||++++++.+||+|||.+.
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 77 FYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred cEEEEEeCCCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 89999999999999998642 23468999999999999999999998 799999999999999999999999999986
Q ss_pred CCCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 610 PSKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 610 ~~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
..... ...+.+||... ...++.++|||||||++|||+| |..||...........+... ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~---~~----- 223 (263)
T cd05052 153 LMTGDTYTAHAGAKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG---YR----- 223 (263)
T ss_pred ccccceeeccCCCCCccccCCHHHhc-cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC---CC-----
Confidence 43321 11245556543 4567789999999999999998 99999765544332222111 10
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
...+......+.+++.+||+.||++||++.|+++.|+.+
T Consensus 224 -------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 224 -------MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 001112235677999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=310.34 Aligned_cols=242 Identities=19% Similarity=0.289 Sum_probs=189.4
Q ss_pred cCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
++|++.+.||+|+||+||+|+..++..||+|.++... ...+++.+|++++++++||||++++++|. .....
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~ 74 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCT--------KQRPI 74 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEc--------cCCCc
Confidence 3577789999999999999998777789999987433 33467999999999999999999999874 23457
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
++||||+++|+|.+++... ...+++.+++.++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||.++.
T Consensus 75 ~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~ 149 (256)
T cd05113 75 YIVTEYMSNGCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRY 149 (256)
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCcccee
Confidence 9999999999999998642 3368999999999999999999998 7999999999999999999999999998753
Q ss_pred CCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 611 SKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 611 ~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
.... ...+.+||... ...++.++|||||||++|||+| |+.||...........+...... ...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~pe~~~-~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~-- 223 (256)
T cd05113 150 VLDDEYTSSVGSKFPVRWSPPEVLL-YSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL---YRP-- 223 (256)
T ss_pred cCCCceeecCCCccChhhCCHHHHh-cCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC---CCC--
Confidence 2211 11234455443 3457889999999999999999 99999765543333322111100 000
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
......+.+++.+||+.||++||++.++++.|+
T Consensus 224 ----------~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 ----------HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ----------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 011346679999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=315.03 Aligned_cols=251 Identities=21% Similarity=0.319 Sum_probs=195.8
Q ss_pred cCCCCCCeeecCCCccEEEEEe------cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
++|.+.+.||+|+||.||++.. .++..+|+|.+........+.+.+|++++++++||||+++++++.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------- 77 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV------- 77 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-------
Confidence 5688899999999999999974 234568999987655445567999999999999999999999885
Q ss_pred CCCCceEEEEecccCcchhhhccccc----------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceee
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWK----------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 594 (740)
.++..++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+ .+|+||||||+||++
T Consensus 78 -~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili 153 (288)
T cd05093 78 -EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLV 153 (288)
T ss_pred -cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEE
Confidence 3456899999999999999986422 12358999999999999999999998 799999999999999
Q ss_pred cCCCceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhH
Q 004637 595 DKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLK 662 (740)
Q Consensus 595 d~~~~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~ 662 (740)
++++.+||+|||+++..... ...+.+||... ...++.++|||||||++|||+| |+.||.........
T Consensus 154 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~ 232 (288)
T cd05093 154 GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 232 (288)
T ss_pred ccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999998643211 12345566543 4567889999999999999999 89998765443332
Q ss_pred HHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhcc
Q 004637 663 LQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQ 728 (740)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (740)
..+.. ....... . .....+.+++.+||+.||.+|||+.|+.+.|+.+....
T Consensus 233 ~~i~~---~~~~~~~--------~----~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 233 ECITQ---GRVLQRP--------R----TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred HHHHc---CCcCCCC--------C----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 22211 1100000 1 11245779999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=320.99 Aligned_cols=258 Identities=17% Similarity=0.298 Sum_probs=191.7
Q ss_pred hcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.++|++.+.||+|+||.||+|+.. ++..+|+|.++... ....+.+.+|++++++++||||++++++|.. +
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------~ 75 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--------D 75 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE--------C
Confidence 367999999999999999999954 68899999887542 2234578999999999999999999998862 3
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
+..++||||+++|+|.+++.. ...+++.....++.|+++||+|||+. .+|+||||||+|||++.++.+||+|||+
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 76 GEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred CEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 568999999999999999953 44588999999999999999999972 4799999999999999999999999999
Q ss_pred CCCCC-------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc---
Q 004637 608 PLPSK-------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR--- 677 (740)
Q Consensus 608 a~~~~-------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 677 (740)
+.... .++..+.+||... ...++.++|||||||++|||++|+.||...........+.......+....
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (333)
T cd06650 151 SGQLIDSMANSFVGTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSP 229 (333)
T ss_pred chhhhhhccccCCCCccccCHHHhc-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCc
Confidence 85322 2334456666654 456788999999999999999999999765433322211100000000000
Q ss_pred ---------cccCccccC-----------------CC-cHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 678 ---------AEADPSVRG-----------------TY-AYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 678 ---------~~~~~~l~~-----------------~~-~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
....+..+. .. ......++.+++.+||+.||++|||+.|++++-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~ 300 (333)
T cd06650 230 RPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHA 300 (333)
T ss_pred ccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCH
Confidence 000000000 00 001124577999999999999999999998754
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=339.80 Aligned_cols=256 Identities=19% Similarity=0.226 Sum_probs=196.5
Q ss_pred HHHHhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccC
Q 004637 446 IEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (740)
Q Consensus 446 l~~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~ 522 (740)
.....++|.+.+.||+|+||+||+|+ ..+|+.||||+++... ......+.+|+.++..++|+||+++.+.+......
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 34455789999999999999999998 4579999999997543 22345678899999999999999998776533222
Q ss_pred CCCCCCceEEEEecccCcchhhhccccc-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCcee
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~k 601 (740)
.......+++||||+++|+|.++++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEE
Confidence 2223335789999999999999986432 34568999999999999999999999 7999999999999999999999
Q ss_pred EecCCCCCCCC-----------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhh
Q 004637 602 LSGYNIPLPSK-----------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 602 l~DFGla~~~~-----------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 670 (740)
|+|||+++... .++..|.+||... ...++.++|||||||++|||++|+.||...........+ ..
T Consensus 184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~-~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~---~~ 259 (496)
T PTZ00283 184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWR-RKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKT---LA 259 (496)
T ss_pred EEecccCeeccccccccccccccCCcceeCHHHhC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---hc
Confidence 99999985321 1334456666654 456789999999999999999999999865443322221 11
Q ss_pred cCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 671 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
...... +.....++.+++.+||+.||++||++.|++++
T Consensus 260 ~~~~~~------------~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 260 GRYDPL------------PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCC------------CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 111001 11123456799999999999999999999864
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=326.60 Aligned_cols=243 Identities=18% Similarity=0.264 Sum_probs=184.0
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||+||+|+. .+++.||||+++... ......+.+|+.++.+++||||+++++++. +
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~--------~ 72 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ--------D 72 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe--------c
Confidence 4788999999999999999984 468999999997542 223356788999999999999999998774 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
+...|+|||||++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 73 KLNLYLIMEFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred CCeEEEEEcCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeecc
Confidence 4568999999999999999953 4568999999999999999999999 799999999999999999999999999
Q ss_pred CCCCCC--------------------------------------------CCCCCccccccccCCCCCCCccceehhhHH
Q 004637 607 IPLPSK--------------------------------------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVI 642 (740)
Q Consensus 607 la~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvi 642 (740)
+++... .|+..|.+||... ...++.++|||||||+
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~-~~~~~~~~DvwSlGvi 225 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFM-QTGYNKLCDWWSLGVI 225 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHc-CCCCCCchhhhhhHHH
Confidence 975321 2334456666654 4567889999999999
Q ss_pred HHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccc--cCCCCCCCHHHHHHH
Q 004637 643 LLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLS--KDAAKRPSIEDVLWN 720 (740)
Q Consensus 643 l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~--~dP~~RPs~~evl~~ 720 (740)
+|||++|+.||...........+....... . ..+.. .. ...+.+++.+++. .++..||+++|++++
T Consensus 226 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~~--~----~p~~~--~~----s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 226 MYEMLIGYPPFCSETPQETYKKVMNWKETL--I----FPPEV--PI----SEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCcCcc--c----CCCcC--CC----CHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 999999999998655443333222111000 0 11100 01 1234466665332 344467999999986
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=313.89 Aligned_cols=246 Identities=22% Similarity=0.359 Sum_probs=192.5
Q ss_pred cCCCCCCeeecCCCccEEEEEecC------CCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTD------GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~ 523 (740)
++|++.+.||+|+||.||+|.... ...||+|.++.... ...+.+.+|++++++++||||+++++++.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~------ 78 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT------ 78 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc------
Confidence 467788999999999999998533 25799999874432 23457899999999999999999999875
Q ss_pred CCCCCceEEEEecccCcchhhhcccccC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCC
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTE 590 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~ 590 (740)
..+..+++|||+++|+|.+++..... ...+++..+..++.|++.||+|||+ .+|+||||||+
T Consensus 79 --~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~ 153 (283)
T cd05048 79 --KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAAR 153 (283)
T ss_pred --CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccc
Confidence 33458999999999999999864211 1458899999999999999999999 79999999999
Q ss_pred ceeecCCCceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCcc
Q 004637 591 NILLDKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEV 658 (740)
Q Consensus 591 NILld~~~~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~ 658 (740)
||++++++.+||+|||+++..... ...+.+||+.. ...++.++|||||||++|||+| |..||.+...
T Consensus 154 Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05048 154 NCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAIL-YGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN 232 (283)
T ss_pred eEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhc-cCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999999998543111 12355666544 3567889999999999999998 9999986655
Q ss_pred chhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 659 DGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
.+....+..... ...+...+.++.+++.+||+.||++||++.||++.|+.
T Consensus 233 ~~~~~~i~~~~~---------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 233 QEVIEMIRSRQL---------------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHcCCc---------------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 444333321110 00112234567799999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=329.04 Aligned_cols=243 Identities=16% Similarity=0.229 Sum_probs=186.6
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++|||||++++++. +
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~--------~ 72 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ--------D 72 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE--------c
Confidence 4688899999999999999984 578999999987532 223456888999999999999999998875 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
+...|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 73 AQYLYLIMEFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred CCeeEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeecc
Confidence 4568999999999999999853 4568889999999999999999999 799999999999999999999999999
Q ss_pred CCCCC--------------------------------------------------------CCCCCCccccccccCCCCC
Q 004637 607 IPLPS--------------------------------------------------------KKGLESPLRGQYVSNQPGD 630 (740)
Q Consensus 607 la~~~--------------------------------------------------------~~~~~~~~~~~~~~~~~~~ 630 (740)
+++.. ..++..|.+||... ...+
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~ 225 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL-QQGY 225 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHc-cCCC
Confidence 88421 11334456666554 4567
Q ss_pred CCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCC
Q 004637 631 GAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAK 710 (740)
Q Consensus 631 ~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~ 710 (740)
+.++|||||||++|||+||+.||...........+....... .... .......+.+++.+|+. +|.+
T Consensus 226 ~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~--~~p~----------~~~~s~~~~dli~~lL~-~~~~ 292 (377)
T cd05629 226 GQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETL--YFPD----------DIHLSVEAEDLIRRLIT-NAEN 292 (377)
T ss_pred CCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCcc--CCCC----------CCCCCHHHHHHHHHHhc-CHhh
Confidence 899999999999999999999998655433222221110000 0000 00112346689999997 6666
Q ss_pred C---CCHHHHHHHh
Q 004637 711 R---PSIEDVLWNL 721 (740)
Q Consensus 711 R---Ps~~evl~~L 721 (740)
| +++.|++++-
T Consensus 293 r~~r~~~~~~l~hp 306 (377)
T cd05629 293 RLGRGGAHEIKSHP 306 (377)
T ss_pred cCCCCCHHHHhcCC
Confidence 5 5999998864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=314.34 Aligned_cols=244 Identities=21% Similarity=0.239 Sum_probs=189.1
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.|++.+.||+|+||+||++.. .+++.||||++.... ......+.+|++++++++||||+++++++. .+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~ 72 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE--------TK 72 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec--------CC
Confidence 477889999999999999995 468999999997542 222345788999999999999999998774 34
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
+..++||||+++|+|.+++.. .....+++..+..++.|+++||+|||+ .+|+||||||+||++++++.++|+|||+
T Consensus 73 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 73 DALCLVLTLMNGGDLKFHIYN-MGNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred CeEEEEEeccCCCcHHHHHHh-cCcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 568999999999999988854 233468999999999999999999999 7999999999999999999999999999
Q ss_pred CCCCC--------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 608 PLPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 608 a~~~~--------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
+.... .++..+.+||... ...++.++|||||||++|||++|+.||.........+.+.......+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--- 224 (285)
T cd05605 149 AVEIPEGETIRGRVGTVGYMAPEVVK-NERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEY--- 224 (285)
T ss_pred ceecCCCCccccccCCCCccCcHHhc-CCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccccc---
Confidence 85432 2233455666554 45678899999999999999999999986544332222222221111111
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 720 (740)
+......+.+++.+||+.||++|| +++++++.
T Consensus 225 ---------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 225 ---------SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ---------CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 111234466999999999999999 88888765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-36 Score=308.64 Aligned_cols=245 Identities=20% Similarity=0.390 Sum_probs=193.6
Q ss_pred hcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.++|++.+.||+|+||.||+|...+++.||+|.++... ...+++.+|++++++++||||+++++++. ..+.
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~ 75 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCT--------LEEP 75 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEe--------cCCC
Confidence 45688899999999999999998778899999987543 23567999999999999999999999874 3355
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++++|.+++.... ...+++..+..++.|++.|++|||+ .+|+||||||+||++++++.+||+|||+++
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 151 (261)
T cd05068 76 IYIVTELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLAR 151 (261)
T ss_pred eeeeeecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEE
Confidence 899999999999999996422 3468999999999999999999998 799999999999999999999999999885
Q ss_pred CCCCC-------C---CCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 610 PSKKG-------L---ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 610 ~~~~~-------~---~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
..... . ..+.+||+.. ...++.++||||||+++|||+| |+.||...........+... .. .
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~---~~--~-- 223 (261)
T cd05068 152 VIKEDIYEAREGAKFPIKWTAPEAAL-YNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG---YR--M-- 223 (261)
T ss_pred EccCCcccccCCCcCceeccCccccc-cCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---CC--C--
Confidence 43211 1 1244555443 3456889999999999999999 99999765443333222211 00 0
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
..+......+.+++.+|++.+|++||++.++++.|+.
T Consensus 224 --------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 224 --------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred --------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0011223457799999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=308.51 Aligned_cols=245 Identities=18% Similarity=0.329 Sum_probs=192.0
Q ss_pred cCCCCCCeeecCCCccEEEEEecC----CCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
++|++.+.||+|+||.||+|+... ...||||.++... .....++.+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 75 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT-------- 75 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe--------
Confidence 568889999999999999998642 4579999987543 233467889999999999999999999874
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.++..++||||+++|+|.+++.. ....+++..+..++.|++.|++|||+ .+|+||||||+||++++++.+||+||
T Consensus 76 ~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~df 150 (266)
T cd05033 76 KSRPVMIITEYMENGSLDKFLRE--NDGKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDF 150 (266)
T ss_pred cCCceEEEEEcCCCCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECcc
Confidence 34558999999999999999964 23468999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCCC-----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCC
Q 004637 606 NIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAP 673 (740)
Q Consensus 606 Gla~~~~~-----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 673 (740)
|+++.... ....+.+||... ...++.++||||||+++|||++ |..||...........+...... +
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~-~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-~ 228 (266)
T cd05033 151 GLSRRLEDSEATYTTKGGKIPIRWTAPEAIA-YRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL-P 228 (266)
T ss_pred chhhcccccccceeccCCCCCccccChhhhc-cCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC-C
Confidence 99865421 112244555443 4567889999999999999998 99998754433333222211000 0
Q ss_pred cccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 674 ~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
.+.+....+.+++.+||+.+|++||++.||++.|+++
T Consensus 229 --------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 229 --------------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0112234567999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-36 Score=314.39 Aligned_cols=251 Identities=19% Similarity=0.346 Sum_probs=192.3
Q ss_pred cCCCCCCeeecCCCccEEEEEecC-CC--EEEEEEeecc-cccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTD-GS--RVSVKCLKLK-QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~-g~--~vAvK~l~~~-~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~ 525 (740)
++|++.+.||+|+||.||+|+..+ +. .+++|.++.. .....+.+.+|+++++++ +||||+++++++.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-------- 73 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACE-------- 73 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEc--------
Confidence 578889999999999999998643 33 4788888742 223346789999999999 7999999999874
Q ss_pred CCCceEEEEecccCcchhhhccccc-------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCce
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 592 (740)
..+..++||||+++|+|.++++... ....+++..+..++.|++.||+|||+ .+|+||||||+||
T Consensus 74 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Ni 150 (297)
T cd05089 74 NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNV 150 (297)
T ss_pred cCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceE
Confidence 3345899999999999999996422 12358899999999999999999998 7999999999999
Q ss_pred eecCCCceeEecCCCCCCCCC------C--CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHH
Q 004637 593 LLDKALTAKLSGYNIPLPSKK------G--LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKL 663 (740)
Q Consensus 593 Lld~~~~~kl~DFGla~~~~~------~--~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~ 663 (740)
|+++++.+||+|||++..... + ...+.+||... ...++.++|||||||++|||+| |..||..........
T Consensus 151 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~ 229 (297)
T cd05089 151 LVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLN-YSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYE 229 (297)
T ss_pred EECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 999999999999999853221 1 11244555443 4457889999999999999998 999997655433322
Q ss_pred HHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhcc
Q 004637 664 QLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQ 728 (740)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (740)
.+.. ...... +......+.+++.+||+.+|.+||+++++++.|+.+.+..
T Consensus 230 ~~~~---~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 230 KLPQ---GYRMEK------------PRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred HHhc---CCCCCC------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 2211 100000 1112245679999999999999999999999999887644
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=315.96 Aligned_cols=256 Identities=20% Similarity=0.350 Sum_probs=194.4
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCC--EEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGS--RVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~--~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~ 525 (740)
++|++.+.||+|+||.||+|+.. ++. .+|+|.++... ....+.+.+|++++.++ +||||+++++++.
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-------- 78 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-------- 78 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC--------
Confidence 56788899999999999999954 454 45777765432 22345788999999999 8999999999874
Q ss_pred CCCceEEEEecccCcchhhhccccc-------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCce
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 592 (740)
.++..++||||+++|+|.++++... ....+++.+++.++.|+++|++|||+ .+|+||||||+||
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Ni 155 (303)
T cd05088 79 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNI 155 (303)
T ss_pred CCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheE
Confidence 3456899999999999999996432 12357899999999999999999998 7999999999999
Q ss_pred eecCCCceeEecCCCCCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHH
Q 004637 593 LLDKALTAKLSGYNIPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKL 663 (740)
Q Consensus 593 Lld~~~~~kl~DFGla~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~ 663 (740)
|+++++.+||+|||++..... ....+.+||... ...++.++|||||||++|||+| |..||......+...
T Consensus 156 li~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 234 (303)
T cd05088 156 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 234 (303)
T ss_pred EecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHh-ccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHH
Confidence 999999999999999853211 112245555543 4457889999999999999998 999997655443332
Q ss_pred HHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhccccccC
Q 004637 664 QLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQEGWTS 733 (740)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 733 (740)
.+... .. . ..+......+.+++.+||+.+|++||+++++++.|+.+.+....+..
T Consensus 235 ~~~~~---~~--~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~~~ 289 (303)
T cd05088 235 KLPQG---YR--L----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVN 289 (303)
T ss_pred HHhcC---Cc--C----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhhhh
Confidence 22110 00 0 00111223567999999999999999999999999988765554443
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=307.96 Aligned_cols=250 Identities=18% Similarity=0.252 Sum_probs=192.6
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||.||+|+. .+++.||||.++... ......+.+|++++++++||||+++++++. .
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~ 73 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI--------E 73 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE--------E
Confidence 5788999999999999999994 478999999886432 222356889999999999999999999875 2
Q ss_pred CCceEEEEecccCcchhhhccccc-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.+..++||||+++|+|.+++.... ....+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.++|+||
T Consensus 74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~ 150 (267)
T cd08228 74 DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECcc
Confidence 345899999999999999885432 23457889999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 606 NIPLPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 606 Gla~~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|++.... .+...+.+||... ...++.++||||||+++|||+||+.||....... ...........
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~---- 224 (267)
T cd08228 151 GLGRFFSSKTTAAHSLVGTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-FSLCQKIEQCD---- 224 (267)
T ss_pred ccceeccchhHHHhcCCCCccccChhhhc-cCCCCchhhHHHHHHHHHHHhcCCCCCccccccH-HHHHHHHhcCC----
Confidence 9875432 1223345566543 4456789999999999999999999986543221 11111111100
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
.+. .........+.+++.+||+.+|++||++.||++.++++
T Consensus 225 ----~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 225 ----YPP---LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred ----CCC---CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 000 01112235577999999999999999999999999865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=328.07 Aligned_cols=246 Identities=14% Similarity=0.223 Sum_probs=190.6
Q ss_pred HhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
..++|++.+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|+.+++.++||||+++++++.
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~------- 113 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ------- 113 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe-------
Confidence 456789999999999999999995 468899999997532 223355788999999999999999998774
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
.+...|+||||+++|+|.+++.. ..++......++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 114 -~~~~~~lv~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 114 -DDKYLYMVMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred -cCCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEe
Confidence 34568999999999999999853 347788888999999999999999 7999999999999999999999999
Q ss_pred CCCCCCCC----------CCCCCccccccccCC---CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhc
Q 004637 605 YNIPLPSK----------KGLESPLRGQYVSNQ---PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE 671 (740)
Q Consensus 605 FGla~~~~----------~~~~~~~~~~~~~~~---~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~ 671 (740)
||++.... .++..+++||..... ..++.++|||||||++|||++|+.||...........+......
T Consensus 186 fG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~ 265 (370)
T cd05596 186 FGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS 265 (370)
T ss_pred ccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc
Confidence 99985322 234456677765432 24788999999999999999999999876543332222111000
Q ss_pred CCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCC--CCCHHHHHHHh
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAK--RPSIEDVLWNL 721 (740)
Q Consensus 672 ~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~~L 721 (740)
. .... .......+.+++.+|+..+|++ ||++.|++++-
T Consensus 266 ~--~~~~----------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 266 L--TFPD----------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred C--CCCC----------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence 0 0000 0012345668999999999988 99999998753
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=318.74 Aligned_cols=233 Identities=20% Similarity=0.283 Sum_probs=182.3
Q ss_pred CeeecCCCccEEEEEe----cCCCEEEEEEeeccc----ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 457 NLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+.||+|+||.||+++. .+++.||||+++... ......+.+|++++++++||||+++++++. .++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~--------~~~ 73 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ--------TGG 73 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEe--------cCC
Confidence 6799999999999984 357899999997532 223356788999999999999999998874 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..|+||||+++|+|.+++.. ...+.+..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 74 KLYLILEYLSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred eEEEEEeCCCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 68999999999999999853 4567888899999999999999998 79999999999999999999999999997
Q ss_pred CCCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 609 LPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
+... .++..+.+||... ...++.++|||||||++|||++|+.||...+.......+..... .+...
T Consensus 148 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~----~~~~~ 222 (323)
T cd05584 148 KESIHEGTVTHTFCGTIEYMAPEILM-RSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL----NLPPY 222 (323)
T ss_pred eecccCCCcccccCCCccccChhhcc-CCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC----CCCCC
Confidence 5321 2344466677654 34568899999999999999999999986554332222211110 11111
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 720 (740)
....+.+++.+||+.||++|| ++.++++.
T Consensus 223 ------------~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 223 ------------LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred ------------CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 123466999999999999999 78888764
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=329.31 Aligned_cols=242 Identities=16% Similarity=0.218 Sum_probs=185.9
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
.+|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++.+. .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~--------~ 72 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ--------D 72 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE--------c
Confidence 3688999999999999999994 468999999997432 233466889999999999999999998774 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
++.+|+||||+++|+|.+++.. ...+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 73 KDNLYFVMDYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred CCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 4679999999999999999953 4568888899999999999999999 799999999999999999999999999
Q ss_pred CCCCC----------------------------------------------------CCCCCCccccccccCCCCCCCcc
Q 004637 607 IPLPS----------------------------------------------------KKGLESPLRGQYVSNQPGDGAKE 634 (740)
Q Consensus 607 la~~~----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~ks 634 (740)
++... ..++..+++||... ...++.++
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~ 225 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLC 225 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHc-CCCCCcce
Confidence 86311 02344456666554 45678899
Q ss_pred ceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCC--
Q 004637 635 DVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-- 712 (740)
Q Consensus 635 DVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-- 712 (740)
|||||||++|||+||+.||...........+....... . . + ........+.+++.+|+ .+|++|+
T Consensus 226 DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~-----~-~-~-----~~~~~s~~~~~li~~l~-~~p~~R~~~ 292 (376)
T cd05598 226 DWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTL-----H-I-P-----SQAKLSREASDLILRLC-CGAEDRLGK 292 (376)
T ss_pred eeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccc-----c-C-C-----CCCCCCHHHHHHHHHHh-cCHhhcCCC
Confidence 99999999999999999998665433322221110000 0 0 0 00011234557777766 5999999
Q ss_pred -CHHHHHHH
Q 004637 713 -SIEDVLWN 720 (740)
Q Consensus 713 -s~~evl~~ 720 (740)
++.|++++
T Consensus 293 ~t~~ell~h 301 (376)
T cd05598 293 NGADEIKAH 301 (376)
T ss_pred CCHHHHhCC
Confidence 89999876
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=308.79 Aligned_cols=251 Identities=17% Similarity=0.304 Sum_probs=191.4
Q ss_pred CCCCCeeecCCCccEEEEEecC----CCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
|++.+.||+|+||.||+|+... +..||+|+++.... ...+.+.+|++.++.++||||+++++++... +....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEA--SSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccC--Ccccc
Confidence 5678899999999999998542 36799999875432 2235789999999999999999999987532 11123
Q ss_pred CCceEEEEecccCcchhhhccccc---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEe
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWK---KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~ 603 (740)
....++||||+++|+|.+++.... ....+++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEEC
Confidence 345799999999999999985422 23468999999999999999999998 799999999999999999999999
Q ss_pred cCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhc
Q 004637 604 GYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAE 671 (740)
Q Consensus 604 DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 671 (740)
|||+++..... ...+.+||+. ....++.++|||||||++|||++ |..||...........+...
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~-~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~--- 231 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL-ADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG--- 231 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhc-ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC---
Confidence 99998643211 1123445543 34567889999999999999999 88998765443333222211
Q ss_pred CCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 672 ~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
..... +......+.+++.+||+.||++||++.|+++.|+.+
T Consensus 232 ~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 232 NRLKQ------------PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCC------------CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 10001 112234677999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=328.13 Aligned_cols=241 Identities=15% Similarity=0.214 Sum_probs=183.0
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.|++.+.||+|+||+||+|+. .+++.||+|++.... ....+.+.+|++++++++|||||++++++. ++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~--------~~ 73 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ--------DK 73 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE--------eC
Confidence 578899999999999999994 568899999997542 223457889999999999999999998875 34
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
+..|+|||||++|+|.+++.. ...+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 74 DNLYFVMDYIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred CEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCC
Confidence 568999999999999999853 3468888999999999999999999 7999999999999999999999999998
Q ss_pred CCCC--------------------------------------------------------CCCCCCccccccccCCCCCC
Q 004637 608 PLPS--------------------------------------------------------KKGLESPLRGQYVSNQPGDG 631 (740)
Q Consensus 608 a~~~--------------------------------------------------------~~~~~~~~~~~~~~~~~~~~ 631 (740)
+... ..++..|.+||... ...++
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~ 226 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLL-RTGYT 226 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhc-CCCCC
Confidence 6321 01334456666554 45678
Q ss_pred CccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCC
Q 004637 632 AKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKR 711 (740)
Q Consensus 632 ~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~R 711 (740)
.++|||||||++|||+||+.||...+.......+....... .... . .....++.+++.+++ .+|++|
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~--~~p~--~--------~~~s~~~~~li~~l~-~~p~~R 293 (382)
T cd05625 227 QLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSL--HIPP--Q--------AKLSPEASDLIIKLC-RGPEDR 293 (382)
T ss_pred CeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCc--CCCC--c--------ccCCHHHHHHHHHHc-cCHhHc
Confidence 99999999999999999999998654432222221110000 0000 0 011233457777765 599999
Q ss_pred CC---HHHHHHH
Q 004637 712 PS---IEDVLWN 720 (740)
Q Consensus 712 Ps---~~evl~~ 720 (740)
++ +.|++++
T Consensus 294 ~~~~~~~ei~~h 305 (382)
T cd05625 294 LGKNGADEIKAH 305 (382)
T ss_pred CCCCCHHHHhcC
Confidence 87 8887764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-36 Score=321.18 Aligned_cols=252 Identities=19% Similarity=0.317 Sum_probs=190.6
Q ss_pred hcCCCCCCeeecCCCccEEEEEe------cCCCEEEEEEeecccc-cChhHHHHHHHHHhhc-cCcccceeeceeeeecc
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~ 521 (740)
.++|++.+.||+|+||.||+|+. .+++.||||+++.... .....+.+|++++.++ +||||++++++|..
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--- 82 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK--- 82 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec---
Confidence 45788999999999999999973 3478899999975432 2245688999999999 68999999998852
Q ss_pred CCCCCCCceEEEEecccCcchhhhcccccC--------------------------------------------------
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------------------------------------------- 551 (740)
Q Consensus 522 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~-------------------------------------------------- 551 (740)
.+...++||||+++|+|.++++....
T Consensus 83 ----~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (343)
T cd05103 83 ----PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSL 158 (343)
T ss_pred ----CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcc
Confidence 23457999999999999999864210
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCC----
Q 004637 552 --------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK---- 613 (740)
Q Consensus 552 --------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~---- 613 (740)
...+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||++.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 235 (343)
T cd05103 159 SDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY 235 (343)
T ss_pred ccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcch
Confidence 1247888999999999999999998 7999999999999999999999999999854211
Q ss_pred -------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccccCcccc
Q 004637 614 -------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVR 685 (740)
Q Consensus 614 -------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 685 (740)
+...+.+||... ...++.++|||||||++|||++ |..||.......... ..............
T Consensus 236 ~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~------ 306 (343)
T cd05103 236 VRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC--RRLKEGTRMRAPDY------ 306 (343)
T ss_pred hhcCCCCCCcceECcHHhc-CCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHH--HHHhccCCCCCCCC------
Confidence 112244555543 4567889999999999999997 899987543221111 11101000001111
Q ss_pred CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 686 GTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 686 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
....+.+++.+||+.||++||++.||++.|+.+.+
T Consensus 307 ------~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 307 ------TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred ------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 12346799999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-36 Score=311.90 Aligned_cols=245 Identities=21% Similarity=0.329 Sum_probs=192.4
Q ss_pred cCCCCCCeeecCCCccEEEEEecC------CCEEEEEEeeccccc-ChhHHHHHHHHHhhccCcccceeeceeeeeccCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTD------GSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~-~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~ 523 (740)
++|.+.+.||+|+||.||+|+..+ ++.||||.++..... ..+.+.+|++++++++||||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~------ 78 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCT------ 78 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEe------
Confidence 457788999999999999998532 478999998755433 3568999999999999999999999885
Q ss_pred CCCCCceEEEEecccCcchhhhccccc-----------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCce
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWK-----------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 592 (740)
.+...++||||+++|+|.+++.... ....+++.++..++.|++.|++|||+ .+++||||||+||
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~ni 153 (280)
T cd05049 79 --EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNC 153 (280)
T ss_pred --cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceE
Confidence 2356899999999999999996432 13457899999999999999999998 7999999999999
Q ss_pred eecCCCceeEecCCCCCCCCC-------C----CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccch
Q 004637 593 LLDKALTAKLSGYNIPLPSKK-------G----LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDG 660 (740)
Q Consensus 593 Lld~~~~~kl~DFGla~~~~~-------~----~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~ 660 (740)
+++.++.+||+|||++..... + ...+.+||... ...++.++|||||||++|||++ |+.||.......
T Consensus 154 li~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~ 232 (280)
T cd05049 154 LVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE 232 (280)
T ss_pred EEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhc-cCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 999999999999999853211 1 12345666544 4567889999999999999999 999997655444
Q ss_pred hHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 661 LKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
....+...... .. +......+.+++.+||+.||++||++.||++.|+
T Consensus 233 ~~~~~~~~~~~---~~------------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 233 VIECITQGRLL---QR------------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHcCCcC---CC------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 33333211100 00 1112345679999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=325.83 Aligned_cols=252 Identities=19% Similarity=0.300 Sum_probs=191.8
Q ss_pred HhcCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeecccc-cChhHHHHHHHHHhhcc-Ccccceeeceeeeec
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLR-HRHLVSILGHCILTY 520 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~ 520 (740)
..++|.+.+.||+|+||.||+|+.. .+..||||+++.... ...+.+.+|+++++++. |||||+++|+|.
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~--- 111 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT--- 111 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc---
Confidence 4567888999999999999999842 134799999975432 33467899999999996 999999999885
Q ss_pred cCCCCCCCceEEEEecccCcchhhhcccccC-------------------------------------------------
Q 004637 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------------------------------------------------- 551 (740)
Q Consensus 521 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~------------------------------------------------- 551 (740)
..+..|+|||||++|+|.++++....
T Consensus 112 -----~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (400)
T cd05105 112 -----KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTT 186 (400)
T ss_pred -----cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccc
Confidence 34568999999999999998864210
Q ss_pred --------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCC
Q 004637 552 --------------------------------------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL 587 (740)
Q Consensus 552 --------------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl 587 (740)
...+++..+..++.|+++||+|||+ .+|+||||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~di 263 (400)
T cd05105 187 QYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDL 263 (400)
T ss_pred ccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCC
Confidence 1247888899999999999999998 79999999
Q ss_pred CCCceeecCCCceeEecCCCCCCCCC-----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCC
Q 004637 588 KTENILLDKALTAKLSGYNIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKST 655 (740)
Q Consensus 588 Kp~NILld~~~~~kl~DFGla~~~~~-----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~ 655 (740)
||+|||+++++.+||+|||+++.... +...+.+||... ...++.++|||||||++|||++ |..||..
T Consensus 264 kp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwSlGvil~ellt~g~~P~~~ 342 (400)
T cd05105 264 AARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIF-DNLYTTLSDVWSYGILLWEIFSLGGTPYPG 342 (400)
T ss_pred ChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhc-CCCCCchhhHHHHHHHHHHHHHCCCCCCcc
Confidence 99999999999999999999853211 112345566543 4557889999999999999997 9999875
Q ss_pred CccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 656 SEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
......... ....... ...+......+.+++.+||+.||++||++.+|.+.|+...+
T Consensus 343 ~~~~~~~~~--~~~~~~~------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 343 MIVDSTFYN--KIKSGYR------------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred cchhHHHHH--HHhcCCC------------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 432221111 1111100 00111233567799999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=322.16 Aligned_cols=234 Identities=18% Similarity=0.220 Sum_probs=184.2
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
+.||+|+||.||+++. .+|+.||+|+++... ......+.+|+++++.++||||+++++++. .++..|+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~--------~~~~~~l 72 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ--------THDRLCF 72 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEE--------cCCEEEE
Confidence 4699999999999984 568999999998542 223356788999999999999999998774 3456899
Q ss_pred EEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCC
Q 004637 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 612 (740)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. .+|+||||||+|||++.++.+||+|||+++...
T Consensus 73 v~E~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~ 147 (325)
T cd05594 73 VMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 147 (325)
T ss_pred EEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecC
Confidence 9999999999998853 45689999999999999999999963 599999999999999999999999999875321
Q ss_pred ---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCcc
Q 004637 613 ---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683 (740)
Q Consensus 613 ---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
.++..+.+||... ...++.++|||||||++|||+||+.||...+.......+..... .....+
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~----~~p~~~--- 219 (325)
T cd05594 148 KDGATMKTFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI----RFPRTL--- 219 (325)
T ss_pred CCCcccccccCCcccCCHHHHc-cCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC----CCCCCC---
Confidence 2344566676654 45678999999999999999999999986554433332221111 111111
Q ss_pred ccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 004637 684 VRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 684 l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 720 (740)
...+.+++.+||+.||++|+ ++.|++++
T Consensus 220 ---------~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 220 ---------SPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred ---------CHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 23456899999999999996 89999865
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=312.69 Aligned_cols=248 Identities=15% Similarity=0.270 Sum_probs=190.4
Q ss_pred HhcCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeecc
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~ 521 (740)
..++|++.+.||+|+||.||+|... ++..||||.++... .....++.+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~---- 79 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS---- 79 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence 4577999999999999999998743 25679999886432 223456889999999999999999999874
Q ss_pred CCCCCCCceEEEEecccCcchhhhcccccC-------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceee
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594 (740)
Q Consensus 522 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 594 (740)
.+...++||||+++|+|.++++.... ...+++..+..++.|+++||+|||+ .+++||||||+||++
T Consensus 80 ----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~ 152 (277)
T cd05062 80 ----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMV 152 (277)
T ss_pred ----CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEE
Confidence 34568999999999999999864221 2346788999999999999999998 799999999999999
Q ss_pred cCCCceeEecCCCCCCCCC-----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhH
Q 004637 595 DKALTAKLSGYNIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLK 662 (740)
Q Consensus 595 d~~~~~kl~DFGla~~~~~-----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~ 662 (740)
++++.+||+|||+++.... +...+++||... ...++.++|||||||++|||++ |..||.........
T Consensus 153 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~ 231 (277)
T cd05062 153 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVL 231 (277)
T ss_pred cCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhh-cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 9999999999999853211 112355566543 4557889999999999999999 78888765443332
Q ss_pred HHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 663 LQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
..+... ..... +......+.+++.+||+.||++|||+.|+++.|++
T Consensus 232 ~~~~~~---~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 232 RFVMEG---GLLDK------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHcC---CcCCC------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 222111 10000 11123456799999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=319.36 Aligned_cols=236 Identities=21% Similarity=0.283 Sum_probs=183.2
Q ss_pred CCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHH---hhccCcccceeeceeeeeccCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELL---SKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il---~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
|++.+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++ ++++||||+++++++.
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~-------- 72 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQ-------- 72 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEE--------
Confidence 56788999999999999985 468999999998542 22335566776654 5668999999999874
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.++..|+||||+++|+|..+++ ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 73 ~~~~~~lv~E~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 73 TEDHVCFVMEYAAGGDLMMHIH----TDVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred cCCEEEEEEcCCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcc
Confidence 3456899999999999998884 2468999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 606 NIPLPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 606 Gla~~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|+++... .++..+++||... ...++.++|||||||++|||++|+.||...+.......+...... .
T Consensus 146 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~----~ 220 (324)
T cd05589 146 GLCKEGMGFGDRTSTFCGTPEFLAPEVLT-ETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVR----Y 220 (324)
T ss_pred cCCccCCCCCCcccccccCccccCHhHhc-CCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC----C
Confidence 9875321 1344466666654 456788999999999999999999999876544433322221111 1
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 720 (740)
.. .....+.+++.+||+.||++|| ++.++++.
T Consensus 221 p~------------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 221 PR------------FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred CC------------CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 11 1124456899999999999999 56777664
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=317.67 Aligned_cols=257 Identities=18% Similarity=0.289 Sum_probs=193.1
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
++|.+.+.||+|+||.||+|+.. +++.||+|.++... ......+.+|++++++++||||+++++++. .++
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~ 77 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH--------TDK 77 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe--------eCC
Confidence 56888999999999999999854 67899999997543 233456789999999999999999999875 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++ +|.+++.. ....+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 78 SLTLVFEYLDK-DLKQYMDD--CGNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred eEEEEEeCCCC-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccc
Confidence 68999999985 88888753 23457889999999999999999998 79999999999999999999999999998
Q ss_pred CCCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 609 LPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
.... .++..+.+||.......++.++|||||||++|||+||+.||...+..+....+.......+......
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (309)
T cd07872 152 RAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPG 231 (309)
T ss_pred eecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Confidence 5321 1233456677665556678899999999999999999999987655443333332222111100000
Q ss_pred cC----------ccccCC----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 680 AD----------PSVRGT----YAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 680 ~~----------~~l~~~----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.. +..... .......++.+++.+|+..||++|||+.|++++-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 287 (309)
T cd07872 232 ISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHA 287 (309)
T ss_pred hcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcCh
Confidence 00 000000 0011234567999999999999999999999744
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=311.96 Aligned_cols=246 Identities=20% Similarity=0.293 Sum_probs=188.9
Q ss_pred cCCCCCCeeecCCCccEEEEEe-----cCCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
++|++.+.||+|+||.||+|+. .++..||+|.++.... .....+.+|++++++++||||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~------- 77 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT------- 77 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-------
Confidence 4577789999999999999983 2467899999974332 22357889999999999999999999874
Q ss_pred CCCCceEEEEecccCcchhhhccccc--------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCC
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWK--------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTE 590 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~ 590 (740)
.+...|+||||+++|+|.+++.... ....+++.+...++.|++.||+|||+ .+|+||||||+
T Consensus 78 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~ 153 (283)
T cd05090 78 -QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAAR 153 (283)
T ss_pred -cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccc
Confidence 3455899999999999999985321 12357899999999999999999998 79999999999
Q ss_pred ceeecCCCceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCcc
Q 004637 591 NILLDKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEV 658 (740)
Q Consensus 591 NILld~~~~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~ 658 (740)
||++++++.+||+|||+++..... ...+.+||+.. ...++.++|||||||++|||++ |..||.....
T Consensus 154 nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05090 154 NILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIM-YGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN 232 (283)
T ss_pred eEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhc-cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999999998543111 11244555543 3457889999999999999999 9999976543
Q ss_pred chhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 659 DGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
......+... ..... +......+.+++.+||+.||++||++.+|.+.|..
T Consensus 233 ~~~~~~~~~~---~~~~~------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 QEVIEMVRKR---QLLPC------------SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHcC---CcCCC------------CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 3333322211 10001 11122456789999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=305.72 Aligned_cols=243 Identities=21% Similarity=0.352 Sum_probs=191.3
Q ss_pred cCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
++|++.+.||+|+||.||+|... |..||+|.++... ..+.+.+|+.++++++|+|++++++++.. .++..
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~ 75 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE-------EKGGL 75 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEc-------CCCce
Confidence 46888899999999999999864 7889999886432 34678999999999999999999997642 33458
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
++||||+++|+|.++++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+|++|||+++.
T Consensus 76 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~ 151 (256)
T cd05082 76 YIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 151 (256)
T ss_pred EEEEECCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCcccee
Confidence 9999999999999998642 23458899999999999999999998 7999999999999999999999999999864
Q ss_pred CCCC------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccccCcc
Q 004637 611 SKKG------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683 (740)
Q Consensus 611 ~~~~------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
.... ...+.+||+.. ...++.++|||||||++|||++ |+.||...........+... .+...
T Consensus 152 ~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~---~~~~~------- 220 (256)
T cd05082 152 ASSTQDTGKLPVKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG---YKMDA------- 220 (256)
T ss_pred ccccCCCCccceeecCHHHHc-cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC---CCCCC-------
Confidence 3221 12345556543 4567889999999999999998 99998765443333332211 11011
Q ss_pred ccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 684 VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 684 l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
...+...+.+++.+||+.+|++|||+.++++.|+.
T Consensus 221 -----~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 221 -----PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred -----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 11223456799999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=306.55 Aligned_cols=244 Identities=22% Similarity=0.361 Sum_probs=192.3
Q ss_pred hcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.++|++.+.||+|+||.||+|...++..||+|.++.... ..+.+.+|+.++++++|+|++++++++. ...
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~---------~~~ 74 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS---------EEP 74 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC---------CCC
Confidence 356888999999999999999988888999999875433 3567999999999999999999998762 133
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++++|.++++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||.+.
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~ 150 (260)
T cd05070 75 IYIVTEYMSKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLAR 150 (260)
T ss_pred cEEEEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeee
Confidence 68999999999999999642 23458999999999999999999999 799999999999999999999999999985
Q ss_pred CCCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 610 PSKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 610 ~~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
..... ...+.+||+.. ...++.++||||||+++|||++ |+.||...+.......+.. ....
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~---~~~~---- 222 (260)
T cd05070 151 LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER---GYRM---- 222 (260)
T ss_pred eccCcccccccCCCCCccccChHHHh-cCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc---CCCC----
Confidence 32211 11245566543 4557889999999999999999 8899976544333332211 1100
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
..+.+....+.+++.+|+..+|++|||+.++.+.|+.
T Consensus 223 --------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 --------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred --------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111223457799999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=336.54 Aligned_cols=241 Identities=17% Similarity=0.189 Sum_probs=189.1
Q ss_pred CCCCCCeeecCCCccEEEEEec-C-CCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-D-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~-g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+.+|+++++.++|||||+++++|. .++.
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~--------~~~~ 139 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFK--------SDDK 139 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE--------ECCE
Confidence 3888899999999999999843 4 6788999876554444456788999999999999999999885 3456
Q ss_pred eEEEEecccCcchhhhcccc-cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
.|+||||+++|+|.++++.. ....++++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla 216 (478)
T PTZ00267 140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFS 216 (478)
T ss_pred EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCc
Confidence 99999999999999988642 234568899999999999999999999 79999999999999999999999999998
Q ss_pred CCCCC-----------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 609 LPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 609 ~~~~~-----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
+.... ++..|.+||... ...++.++|||||||++|||+||+.||...........+.. .......
T Consensus 217 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~---~~~~~~~ 292 (478)
T PTZ00267 217 KQYSDSVSLDVASSFCGTPYYLAPELWE-RKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY---GKYDPFP 292 (478)
T ss_pred eecCCccccccccccCCCccccCHhHhC-CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCCCCCC
Confidence 64321 334456666544 45678999999999999999999999986544333222211 1100000
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
......+.+++.+||+.||++||++.|++.
T Consensus 293 ------------~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 293 ------------CPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ------------ccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 111235679999999999999999999875
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=312.84 Aligned_cols=251 Identities=21% Similarity=0.287 Sum_probs=195.0
Q ss_pred cCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
.+|.+.+.||+|+||.||+|+.. ++..+++|.++.......+.+.+|++++++++||||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------- 77 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG------- 77 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEc-------
Confidence 35777899999999999999732 35568999987655444567999999999999999999999885
Q ss_pred CCCCceEEEEecccCcchhhhccccc-------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCc
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTEN 591 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N 591 (740)
.+...++||||+++++|.+++.... ....+++..++.++.|++.|++|||+ .+|+||||||+|
T Consensus 78 -~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~N 153 (291)
T cd05094 78 -DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRN 153 (291)
T ss_pred -cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcce
Confidence 3455899999999999999996422 12358999999999999999999998 799999999999
Q ss_pred eeecCCCceeEecCCCCCCCCC-----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccc
Q 004637 592 ILLDKALTAKLSGYNIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVD 659 (740)
Q Consensus 592 ILld~~~~~kl~DFGla~~~~~-----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~ 659 (740)
|+++.++.+||+|||++..... +...+.+||... ...++.++|||||||++|||+| |+.||......
T Consensus 154 il~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 232 (291)
T cd05094 154 CLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 232 (291)
T ss_pred EEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999999853221 122345556543 4567889999999999999999 99998765443
Q ss_pred hhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhcc
Q 004637 660 GLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQ 728 (740)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (740)
.....+.. ...... ....+..+.+++.+||+.||++||++.+|++.|+.+....
T Consensus 233 ~~~~~~~~---~~~~~~------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 233 EVIECITQ---GRVLER------------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred HHHHHHhC---CCCCCC------------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 33222211 110000 1112345779999999999999999999999999886543
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-36 Score=310.85 Aligned_cols=235 Identities=21% Similarity=0.345 Sum_probs=180.4
Q ss_pred eeecCCCccEEEEEecC-------------------------CCEEEEEEeecccccChhHHHHHHHHHhhccCccccee
Q 004637 458 LIGEGSQGQLYKGFLTD-------------------------GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512 (740)
Q Consensus 458 ~iG~G~fg~Vy~~~~~~-------------------------g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l 512 (740)
.||+|+||.||+|+... ...||+|.+..........+.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 13589999876544445678899999999999999999
Q ss_pred eceeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCce
Q 004637 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (740)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 592 (740)
+|+|.. +...++||||+++|+|.+++.. ....+++..++.++.|+++||+|||+ .+|+||||||+||
T Consensus 82 ~~~~~~--------~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Ni 148 (274)
T cd05076 82 HGVCVR--------GSENIMVEEFVEHGPLDVCLRK--EKGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNI 148 (274)
T ss_pred EEEEEe--------CCceEEEEecCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccE
Confidence 999862 3457999999999999999853 34568899999999999999999998 7999999999999
Q ss_pred eecCCC-------ceeEecCCCCCCCC-----CCCCCccccccccCCCCCCCccceehhhHHHHHHH-hCCCCCCCCccc
Q 004637 593 LLDKAL-------TAKLSGYNIPLPSK-----KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVI-TGKQVKSTSEVD 659 (740)
Q Consensus 593 Lld~~~-------~~kl~DFGla~~~~-----~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ell-tG~~p~~~~~~~ 659 (740)
|+++.+ .+|++|||.+.... .+...+.+||.......++.++|||||||++|||+ +|+.||......
T Consensus 149 ll~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 228 (274)
T cd05076 149 LLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS 228 (274)
T ss_pred EEeccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH
Confidence 997644 47999999874321 23344666776654566789999999999999995 699998765433
Q ss_pred hhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 660 GLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
........ .. ..... ....+.+++.+||+.+|++||++.||++.|.
T Consensus 229 ~~~~~~~~----~~-~~~~~------------~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 229 EKERFYEK----KH-RLPEP------------SCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHHHHh----cc-CCCCC------------CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 32221111 00 00000 1134678999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=324.74 Aligned_cols=248 Identities=14% Similarity=0.218 Sum_probs=189.6
Q ss_pred HHHhcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccC
Q 004637 447 EEATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (740)
Q Consensus 447 ~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~ 522 (740)
....++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~----- 113 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ----- 113 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-----
Confidence 334578999999999999999999954 58899999997532 223456789999999999999999998774
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeE
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl 602 (740)
.+...|+|||||++|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||
T Consensus 114 ---~~~~~~lv~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL 183 (370)
T cd05621 114 ---DDKYLYMVMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKL 183 (370)
T ss_pred ---cCCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEE
Confidence 34669999999999999999853 347888999999999999999999 79999999999999999999999
Q ss_pred ecCCCCCCCC----------CCCCCccccccccCC---CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhh
Q 004637 603 SGYNIPLPSK----------KGLESPLRGQYVSNQ---PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCL 669 (740)
Q Consensus 603 ~DFGla~~~~----------~~~~~~~~~~~~~~~---~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~ 669 (740)
+|||++.... .++..+.+||..... ..++.++||||+||++|||+||+.||...........+....
T Consensus 184 ~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~ 263 (370)
T cd05621 184 ADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 263 (370)
T ss_pred EecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence 9999985421 244556777765433 236789999999999999999999998665433322222111
Q ss_pred hcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCC--CCCHHHHHHHh
Q 004637 670 AEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAK--RPSIEDVLWNL 721 (740)
Q Consensus 670 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~~L 721 (740)
... .... .......+.+++.+|+..+|.+ ||++.|++++-
T Consensus 264 ~~~--~~p~----------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp 305 (370)
T cd05621 264 NSL--NFPE----------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHP 305 (370)
T ss_pred ccc--CCCC----------cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCc
Confidence 000 0000 0111234568888899755543 89999999863
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=306.78 Aligned_cols=245 Identities=20% Similarity=0.317 Sum_probs=191.4
Q ss_pred hcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.++|++.+.||+|+||.||+|+..++..||+|+++... ...+.+.+|++++++++||||+++++++. ...
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~---------~~~ 74 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS---------EEP 74 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC---------CCC
Confidence 35688999999999999999998777789999987533 23467899999999999999999998652 233
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++|+|.+++... ....+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||.++
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~ 150 (262)
T cd05071 75 IYIVTEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR 150 (262)
T ss_pred cEEEEEcCCCCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCcee
Confidence 69999999999999999642 23457899999999999999999998 799999999999999999999999999985
Q ss_pred CCCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 610 PSKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 610 ~~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
..... ...+.+||+.. ...++.++|||||||++|||+| |+.||...........+.. ..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~---~~~----- 221 (262)
T cd05071 151 LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYR----- 221 (262)
T ss_pred eccccccccccCCcccceecCHhHhc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhc---CCC-----
Confidence 33211 11244555443 4457889999999999999999 8888875543332221111 100
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
.....+....+.+++.+|++.||++||++.++++.|+..
T Consensus 222 -------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 222 -------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -------CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 001122345677999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=306.92 Aligned_cols=244 Identities=18% Similarity=0.314 Sum_probs=192.6
Q ss_pred hcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.++|++.++||+|+||.||+|...+++.||+|.+..... ..+.+.+|++++++++|+||+++++++. .+.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~---------~~~ 74 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT---------QEP 74 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc---------cCC
Confidence 467888999999999999999988899999999875432 3467999999999999999999998652 234
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++|+|.+++... ....+++.++..++.|++.||+|||+ .+++||||||+||++++++.++++|||++.
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 150 (260)
T cd05067 75 IYIITEYMENGSLVDFLKTP-EGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLAR 150 (260)
T ss_pred cEEEEEcCCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCccee
Confidence 79999999999999998642 33468999999999999999999998 799999999999999999999999999985
Q ss_pred CCCC----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 610 PSKK----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 610 ~~~~----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
.... +...+.+||... ...++.++|||||||++|||++ |+.||...+.......+...... ..
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pe~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~-- 224 (260)
T cd05067 151 LIEDNEYTAREGAKFPIKWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM---PR-- 224 (260)
T ss_pred ecCCCCcccccCCcccccccCHHHhc-cCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC---CC--
Confidence 4331 112244455443 4456789999999999999999 99999865543333322211100 00
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
+.....++.+++.+|+..+|++||+++++.+.|+.
T Consensus 225 ----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 225 ----------PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ----------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 01122457799999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=310.35 Aligned_cols=250 Identities=18% Similarity=0.292 Sum_probs=193.4
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCC----EEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGS----RVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~----~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
++|+..+.||+|+||+||+|+. .+++ .||+|.++... ....+.+.+|+.+++.++||||++++++|..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------ 80 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT------ 80 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC------
Confidence 5678889999999999999984 4454 48999987543 2234678899999999999999999998852
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
...+++|||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|
T Consensus 81 ---~~~~l~~~~~~~g~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~d 152 (279)
T cd05109 81 ---STVQLVTQLMPYGCLLDYVRE--NKDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITD 152 (279)
T ss_pred ---CCcEEEEEcCCCCCHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECC
Confidence 236899999999999999964 23468999999999999999999999 7999999999999999999999999
Q ss_pred CCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcC
Q 004637 605 YNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 605 FGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
||+++..... ...+.+||... ...++.++|||||||++|||+| |..||...........+.......
T Consensus 153 fG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~ 231 (279)
T cd05109 153 FGLARLLDIDETEYHADGGKVPIKWMALESIL-HRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLP 231 (279)
T ss_pred CCceeecccccceeecCCCccchhhCCHHHhc-cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCC
Confidence 9998643211 11244455543 4457889999999999999998 899987654443333322111000
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhcccc
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQEG 730 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (740)
. +......+.+++.+||+.||++||++.|+++.|+.+.+.+.+
T Consensus 232 ---~------------~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~~ 274 (279)
T cd05109 232 ---Q------------PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPSR 274 (279)
T ss_pred ---C------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCcC
Confidence 0 011234567999999999999999999999999888765543
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=305.29 Aligned_cols=237 Identities=19% Similarity=0.355 Sum_probs=184.1
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~ 534 (740)
+.||+|+||.||+|+. .+++.||+|.+.... ......+.+|++++++++||||++++++|. .....++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~~lv~ 72 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT--------QKQPIYIVM 72 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEc--------CCCCeEEEE
Confidence 4689999999999995 478999999876432 223467899999999999999999999885 335589999
Q ss_pred ecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCCC
Q 004637 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKG 614 (740)
Q Consensus 535 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 614 (740)
||+++++|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....+
T Consensus 73 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 73 ELVQGGDFLTFLRT--EGPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG 147 (252)
T ss_pred eeccCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccc
Confidence 99999999999863 23458999999999999999999998 79999999999999999999999999998643221
Q ss_pred C-----------CCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 615 L-----------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 615 ~-----------~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
. ..+.+||... ...++.++|||||||++|||++ |..||...........+... .+
T Consensus 148 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~---~~--------- 214 (252)
T cd05084 148 VYASTGGMKQIPVKWTAPEALN-YGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG---VR--------- 214 (252)
T ss_pred cccccCCCCCCceeecCchhhc-CCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC---CC---------
Confidence 1 1244555543 3456889999999999999998 88888654332222222110 00
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
...+......+.+++.+|++.+|++|||+.|+++.|+
T Consensus 215 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 215 ---LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred ---CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 0011122346779999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=310.79 Aligned_cols=251 Identities=21% Similarity=0.314 Sum_probs=196.1
Q ss_pred hcCCCCCCeeecCCCccEEEEEecC-----CCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTD-----GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~ 523 (740)
.++|++.+.||+|+||.||+|...+ +..||+|+++... ....+.+.+|+.++++++||||+++++++..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----- 79 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIE----- 79 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 4678889999999999999999655 6889999887442 2334678899999999999999999998852
Q ss_pred CCCCCceEEEEecccCcchhhhcccccCC-----CCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKK-----DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~ 598 (740)
.+...++++||+++|+|.+++...... ..+++.++..++.|++.||+|||+ .+++||||||+||++++++
T Consensus 80 --~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~ 154 (280)
T cd05043 80 --DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEEL 154 (280)
T ss_pred --CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCC
Confidence 235579999999999999998643222 468999999999999999999998 7999999999999999999
Q ss_pred ceeEecCCCCCCCCC-----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHH
Q 004637 599 TAKLSGYNIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLE 666 (740)
Q Consensus 599 ~~kl~DFGla~~~~~-----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~ 666 (740)
.+||+|||+++.... +...+.+||... ...++.++|||||||++||+++ |+.||.......+...+.
T Consensus 155 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~ 233 (280)
T cd05043 155 QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLV-NKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLK 233 (280)
T ss_pred cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHh-cCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHH
Confidence 999999999864321 112245555543 3457889999999999999999 999997654433333222
Q ss_pred HhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 667 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
.. .. .. ....+...+.+++.+||..||++|||+.|+++.|+....
T Consensus 234 ~~---~~--~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 234 DG---YR--LA----------QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred cC---CC--CC----------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11 10 00 011123456799999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=322.71 Aligned_cols=244 Identities=16% Similarity=0.196 Sum_probs=189.3
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||+||+|+. .+++.||+|+++.... ...+.+.+|+.+++.++||||+++++++. .
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~--------~ 72 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ--------D 72 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe--------c
Confidence 4688899999999999999994 4689999999985432 23456889999999999999999998774 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
+...++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~--~~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 73 KDNLYLVMEYQPGGDLLSLLNR--YEDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred CCeEEEEECCCCCCCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCC
Confidence 4568999999999999999964 23568999999999999999999999 799999999999999999999999999
Q ss_pred CCCCCC----------CCCCCccccccccC-----CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhc
Q 004637 607 IPLPSK----------KGLESPLRGQYVSN-----QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE 671 (740)
Q Consensus 607 la~~~~----------~~~~~~~~~~~~~~-----~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~ 671 (740)
++.... .++..+.+||.... ...++.++|||||||++|||++|+.||...........+.....
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~- 226 (330)
T cd05601 148 SAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQR- 226 (330)
T ss_pred CCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCC-
Confidence 985322 23444666776542 34567899999999999999999999986544332222211100
Q ss_pred CCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 672 ~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.....+ .......+.+++.+|+. +|++||++.+++++
T Consensus 227 ----~~~~~~-------~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 227 ----FLKFPE-------DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ----ccCCCC-------CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 000000 00122456689999997 99999999999864
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=323.81 Aligned_cols=243 Identities=18% Similarity=0.270 Sum_probs=190.1
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||+||+|+.. +++.||||+++... ......+.+|+++++.++||||+++++++. +
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~ 72 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ--------D 72 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee--------c
Confidence 46888999999999999999954 68999999998542 233467889999999999999999998774 4
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
++..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 73 EEHLYLVMEYMPGGDLMNLLIR---KDVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred CCeEEEEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCC
Confidence 4568999999999999999964 3568999999999999999999999 799999999999999999999999999
Q ss_pred CCCCCCC--------------------------------------CCCCccccccccCCCCCCCccceehhhHHHHHHHh
Q 004637 607 IPLPSKK--------------------------------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT 648 (740)
Q Consensus 607 la~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt 648 (740)
++..... ++..+.+||... ...++.++|||||||++|||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~ell~ 225 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLR-GTPYGLECDWWSLGVILYEMLY 225 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHc-CCCCCCceeeEecchhhhhhcc
Confidence 9854321 233355555544 3467899999999999999999
Q ss_pred CCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCC-HHHHHHHh
Q 004637 649 GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS-IEDVLWNL 721 (740)
Q Consensus 649 G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs-~~evl~~L 721 (740)
|+.||...........+....... ...... .....+.+++.+|+. ||++||+ ++|++++.
T Consensus 226 g~~Pf~~~~~~~~~~~i~~~~~~~--~~p~~~----------~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp 286 (350)
T cd05573 226 GFPPFYSDTLQETYNKIINWKESL--RFPPDP----------PVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP 286 (350)
T ss_pred CCCCCCCCCHHHHHHHHhccCCcc--cCCCCC----------CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCC
Confidence 999998665333222221100000 000000 023456689999997 9999999 99999853
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=312.85 Aligned_cols=251 Identities=19% Similarity=0.332 Sum_probs=194.2
Q ss_pred HHhcCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceeeee
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (740)
Q Consensus 448 ~~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~ 519 (740)
...++|++.+.||+|+||.||+|... ....+|+|.+.... .....++.+|+++++++ +|+||+++++++.
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-- 86 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT-- 86 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc--
Confidence 34467888999999999999999853 23679999987532 22335688999999999 7999999999884
Q ss_pred ccCCCCCCCceEEEEecccCcchhhhcccc-------------cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecC
Q 004637 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDW-------------KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (740)
Q Consensus 520 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD 586 (740)
.++..+++|||+++|+|.++++.. .....+++..++.++.|++.||+|||+ .+|+|||
T Consensus 87 ------~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~d 157 (293)
T cd05053 87 ------QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRD 157 (293)
T ss_pred ------CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccc
Confidence 345589999999999999998642 123568999999999999999999998 7999999
Q ss_pred CCCCceeecCCCceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCC
Q 004637 587 LKTENILLDKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKS 654 (740)
Q Consensus 587 lKp~NILld~~~~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~ 654 (740)
|||+||++++++.+||+|||.++..... ...+.+||.. ....++.++|||||||++|||++ |..||.
T Consensus 158 lkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~ 236 (293)
T cd05053 158 LAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 236 (293)
T ss_pred cceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHh-ccCCcCcccceeehhhHHHHHhcCCCCCCC
Confidence 9999999999999999999998643211 1224455544 34567889999999999999998 999987
Q ss_pred CCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhh
Q 004637 655 TSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSI 725 (740)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (740)
..........+.... . ...+......+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 237 ~~~~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 237 GIPVEELFKLLKEGY--R-------------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCCHHHHHHHHHcCC--c-------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 655443333222110 0 0011122345779999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=305.31 Aligned_cols=235 Identities=18% Similarity=0.298 Sum_probs=183.5
Q ss_pred eeecCCCccEEEEEe---cCCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEE
Q 004637 458 LIGEGSQGQLYKGFL---TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 458 ~iG~G~fg~Vy~~~~---~~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
.||+|+||.||+|.+ .++..+|+|+++.... ...+++.+|+.++++++||||++++|++. ++..++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------~~~~~l 72 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE---------AESWML 72 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc---------CCCcEE
Confidence 589999999999974 3578899999874432 23467899999999999999999999773 234689
Q ss_pred EEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCC
Q 004637 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 612 (740)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++....
T Consensus 73 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 73 VMELAELGPLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred EEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 9999999999999953 3468899999999999999999998 799999999999999999999999999985432
Q ss_pred CCC------------CCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 613 KGL------------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 613 ~~~------------~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
... ..+.+||... ...++.++|||||||++|||+| |+.||...........+..... + ..
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~--~-~~--- 219 (257)
T cd05116 147 ADENYYKAKTHGKWPVKWYAPECMN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER--M-EC--- 219 (257)
T ss_pred CCCCeeeecCCCCCCccccCHhHhc-cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC--C-CC---
Confidence 211 2234455432 3456789999999999999998 9999986554443333321110 0 01
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
+......+.+++.+||+.||++||++.+|.+.|+.
T Consensus 220 ---------~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 220 ---------PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred ---------CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 11123456699999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=305.83 Aligned_cols=240 Identities=18% Similarity=0.289 Sum_probs=188.8
Q ss_pred CCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+|++.+.||+|+||.||+|...++..+|+|.+.... .....+.+|++++++++||||+++++++. ..+..+
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~~~ 75 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCT--------KQRPIF 75 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEc--------CCCceE
Confidence 467789999999999999998777889999986432 23457889999999999999999998874 335589
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++++|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++..
T Consensus 76 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~ 150 (256)
T cd05059 76 IVTEYMANGCLLNYLRE--RKGKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYV 150 (256)
T ss_pred EEEecCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceec
Confidence 99999999999999964 23468999999999999999999998 79999999999999999999999999988543
Q ss_pred CCC-------C---CCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 612 KKG-------L---ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 612 ~~~-------~---~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
... . ..+.+||... ...++.++|||||||++|||+| |+.||......+....+... ..
T Consensus 151 ~~~~~~~~~~~~~~~~y~~Pe~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~---~~------- 219 (256)
T cd05059 151 LDDQYTSSQGTKFPVKWAPPEVFD-YSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG---YR------- 219 (256)
T ss_pred ccccccccCCCCCCccccCHHHhc-cCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC---Cc-------
Confidence 211 1 1244555544 4567889999999999999999 89999765443332222111 00
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
. ..+.....++.+++.+||..+|++|||+.|+++.|
T Consensus 220 -~----~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 220 -L----YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -C----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0 00111234677999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=326.09 Aligned_cols=260 Identities=17% Similarity=0.234 Sum_probs=191.5
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+++++.++||||+++++++..... ....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~~ 77 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHI---DPFE 77 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCc---cccc
Confidence 478899999999999999995 578999999986432 2234578899999999999999999998853211 1123
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..|+||||+. ++|.+++. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 78 ~~~lv~e~~~-~~l~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 78 EIYVVTELMQ-SDLHKIIV---SPQPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred eEEEEeeccc-cCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccce
Confidence 6899999997 58888774 34568999999999999999999999 79999999999999999999999999998
Q ss_pred CCCC----------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCc-ccc
Q 004637 609 LPSK----------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPS-KLR 677 (740)
Q Consensus 609 ~~~~----------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~-~~~ 677 (740)
+... .++..+.+||...+...++.++|||||||++|||++|+.||...+.......+.......+. .+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 230 (372)
T cd07853 151 RVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR 230 (372)
T ss_pred eecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 5322 12334566777665566889999999999999999999999865543332222211110000 000
Q ss_pred ------------ccc-Ccccc--CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 678 ------------AEA-DPSVR--GTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 678 ------------~~~-~~~l~--~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
... .+... .....+...++.+++.+|++.||++|||+.|++++-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 000 00000 001112234677999999999999999999999753
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=316.39 Aligned_cols=249 Identities=20% Similarity=0.339 Sum_probs=199.4
Q ss_pred HHhcCCCCCCeeecCCCccEEEEEecC---CC--EEEEEEeecc-cccChhHHHHHHHHHhhccCcccceeeceeeeecc
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGFLTD---GS--RVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (740)
Q Consensus 448 ~~~~~f~~~~~iG~G~fg~Vy~~~~~~---g~--~vAvK~l~~~-~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~ 521 (740)
...+..+..++||+|.||.||+|.+.+ |. -||||.-+.+ .....+.|..|..+|+.++|||||+++|+|.
T Consensus 386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~---- 461 (974)
T KOG4257|consen 386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV---- 461 (974)
T ss_pred eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee----
Confidence 334455567899999999999999543 33 4888988764 3444678999999999999999999999995
Q ss_pred CCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCcee
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (740)
Q Consensus 522 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~k 601 (740)
....|+|||.++-|.|..||+. ++..++......++.||+.||+|||+ .++|||||..+|||+...-.+|
T Consensus 462 -----e~P~WivmEL~~~GELr~yLq~--nk~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVK 531 (974)
T KOG4257|consen 462 -----EQPMWIVMELAPLGELREYLQQ--NKDSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVK 531 (974)
T ss_pred -----ccceeEEEecccchhHHHHHHh--ccccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceee
Confidence 2448999999999999999974 56678999999999999999999999 8999999999999999999999
Q ss_pred EecCCCCCCCCCCCCC----------ccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhh
Q 004637 602 LSGYNIPLPSKKGLES----------PLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 602 l~DFGla~~~~~~~~~----------~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 670 (740)
++|||+++.......+ +++||-+. -..++.++|||-|||.+||++. |..||.+-...+....+
T Consensus 532 LaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESIN-fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i----- 605 (974)
T KOG4257|consen 532 LADFGLSRYLEDDAYYKASRGKLPIKWMAPESIN-FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI----- 605 (974)
T ss_pred ecccchhhhccccchhhccccccceeecCccccc-hhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe-----
Confidence 9999999765433211 23333322 3467899999999999999997 99999865443322211
Q ss_pred cCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 671 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
...-+-..+..|+..+..++.+||+.||.+||.+.|+...|+.+.+
T Consensus 606 ----------EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 606 ----------ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ----------cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 1111233456677788899999999999999999999999987766
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-36 Score=317.90 Aligned_cols=233 Identities=21% Similarity=0.268 Sum_probs=182.1
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|..++..+ +||||+++++++. ..+..|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~--------~~~~~~ 72 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQ--------TPDRLF 72 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEE--------cCCEEE
Confidence 4699999999999995 468899999997542 23345677888888877 6999999998774 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 iv~Ey~~~g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 73 FVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred EEEcCCCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 99999999999998853 4568999999999999999999998 79999999999999999999999999987532
Q ss_pred C---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 612 K---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 612 ~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
. .++..+.+||... ...++.++|||||||++|||++|+.||...+.......+...... ....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~----~~~~--- 218 (320)
T cd05590 147 IFNGKTTSTFCGTPDYIAPEILQ-EMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV----YPTW--- 218 (320)
T ss_pred CcCCCcccccccCccccCHHHHc-CCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCC----CCCC---
Confidence 1 1344456666654 456788999999999999999999999876554443333211111 1111
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCH------HHHHHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSI------EDVLWN 720 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~------~evl~~ 720 (740)
....+.+++.+|++.||++||++ ++++++
T Consensus 219 ---------~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 219 ---------LSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred ---------CCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 12345689999999999999998 566543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-36 Score=317.65 Aligned_cols=233 Identities=20% Similarity=0.257 Sum_probs=182.8
Q ss_pred CeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||.||+|+.. +++.||||+++... ....+.+..|.+++..+ +||||+++++++. .++..|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~--------~~~~~~ 72 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQ--------TKDRLF 72 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE--------cCCeEE
Confidence 46999999999999954 58899999997542 23345677899998876 7999999999875 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++...
T Consensus 73 lv~E~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 73 FVMEYVNGGDLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 99999999999998853 4568899999999999999999999 79999999999999999999999999987532
Q ss_pred C---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 612 K---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 612 ~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
. .++..+.+||... ...++.++|||||||++|||+||+.||...........+...... ....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~----~p~~--- 218 (321)
T cd05591 147 ILNGVTTTTFCGTPDYIAPEILQ-ELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVL----YPVW--- 218 (321)
T ss_pred ccCCccccccccCccccCHHHHc-CCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----CCCC---
Confidence 1 1344456666554 456788999999999999999999999876554443332211110 1111
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCC-------CHHHHHHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRP-------SIEDVLWN 720 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-------s~~evl~~ 720 (740)
....+.+++.+|++.||++|| ++.+++++
T Consensus 219 ---------~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 219 ---------LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred ---------CCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 124566999999999999999 78888765
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=293.10 Aligned_cols=245 Identities=20% Similarity=0.301 Sum_probs=198.8
Q ss_pred HhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecc--cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
.++.|++.+.||+|.|+.||++. .++|+.+|+|++... .....+++.+|+.|-+.++|||||++...+ .
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti--------~ 80 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI--------Q 80 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh--------c
Confidence 34667778899999999999997 567999999998754 334567899999999999999999998654 3
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeec---CCCceeE
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD---KALTAKL 602 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld---~~~~~kl 602 (740)
.....|+|+|+|.||+|..-+-. ....++...-.+++||+++|.|+|. .+|||||+||+|+++. ..--+|+
T Consensus 81 ~~~~~ylvFe~m~G~dl~~eIV~---R~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL 154 (355)
T KOG0033|consen 81 EESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKL 154 (355)
T ss_pred ccceeEEEEecccchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceee
Confidence 45678999999999999765532 2456778889999999999999999 6999999999999995 3456899
Q ss_pred ecCCCCCCCC--------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCc
Q 004637 603 SGYNIPLPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPS 674 (740)
Q Consensus 603 ~DFGla~~~~--------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 674 (740)
+|||+|.... .|++.+++||.+. ...|+..+|||+.|||||-|+.|..||++.+...+.+.+.......+.
T Consensus 155 ~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvr-kdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~ 233 (355)
T KOG0033|consen 155 ADFGLAIEVNDGEAWHGFAGTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPS 233 (355)
T ss_pred cccceEEEeCCccccccccCCCcccCHHHhh-cCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCC
Confidence 9999985433 3556677777665 567889999999999999999999999987777777777665555544
Q ss_pred ccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 675 KLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 675 ~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
...+.+.+ +..+++.+|+..||++|.|+.|+++.
T Consensus 234 ~~w~~is~------------~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 234 PEWDTVTP------------EAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred cccCcCCH------------HHHHHHHHHhccChhhhccHHHHhCC
Confidence 33333433 34599999999999999999999864
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-36 Score=308.97 Aligned_cols=246 Identities=19% Similarity=0.287 Sum_probs=188.8
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
++|++.+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++++. .++.
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~--------~~~~ 80 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL--------SREK 80 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE--------eCCE
Confidence 5688999999999999999995 568899999997654444567889999999999999999999885 2356
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++|+|.++++. ...+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||++.
T Consensus 81 ~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~ 154 (267)
T cd06646 81 LWICMEYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAA 154 (267)
T ss_pred EEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccce
Confidence 8999999999999999853 3468999999999999999999998 799999999999999999999999999985
Q ss_pred CCCC---------CCCCcccccccc--CCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 610 PSKK---------GLESPLRGQYVS--NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 610 ~~~~---------~~~~~~~~~~~~--~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
.... +...+.+||... ....++.++|||||||++|||++|+.||...........+.... .
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~------~-- 226 (267)
T cd06646 155 KITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSN------F-- 226 (267)
T ss_pred eecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCC------C--
Confidence 3221 223345555543 23346789999999999999999999986433211111000000 0
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
..+.... .......+.+++.+||..||++||+++++++.|
T Consensus 227 -~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 227 -QPPKLKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -CCCCCcc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0000000 111234677999999999999999999998764
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=317.98 Aligned_cols=237 Identities=20% Similarity=0.256 Sum_probs=184.3
Q ss_pred CCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCc-ccceeeceeeeeccCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHR-HLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~-nIv~l~g~~~~~~~~~~~~ 526 (740)
+|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+..|++++..++|+ +|+++++++. .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------~ 72 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ--------T 72 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEE--------c
Confidence 4788899999999999999954 57899999997542 23346688899999999765 5777777664 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
.+..|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 73 MDRLYFVMEYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred CCEEEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecC
Confidence 4568999999999999999853 4568899999999999999999999 799999999999999999999999999
Q ss_pred CCCCCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 607 IPLPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 607 la~~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
++.... .++..+.+||... ...++.++|||||||++|||+||+.||...+.......+...... ..
T Consensus 147 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~----~~ 221 (324)
T cd05587 147 MCKENIFGGKTTRTFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS----YP 221 (324)
T ss_pred cceecCCCCCceeeecCCccccChhhhc-CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC----CC
Confidence 875321 2344566666654 445788999999999999999999999866544433332211111 11
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCH-----HHHHH
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSI-----EDVLW 719 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~-----~evl~ 719 (740)
. .....+.+++.+||+.||++|++. +++.+
T Consensus 222 ~------------~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 256 (324)
T cd05587 222 K------------SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE 256 (324)
T ss_pred C------------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1 112356699999999999999976 56654
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=310.72 Aligned_cols=252 Identities=16% Similarity=0.293 Sum_probs=187.6
Q ss_pred cCCCCCCeeecCCCccEEEEEecC---------------CCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeec
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTD---------------GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILG 514 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~---------------g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g 514 (740)
++|++.+.||+|+||.||+++..+ ...||+|.++... ....+.+.+|++++++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578889999999999999987532 2358999987542 223457899999999999999999999
Q ss_pred eeeeeccCCCCCCCceEEEEecccCcchhhhccccc---------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceec
Q 004637 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK---------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGN 585 (740)
Q Consensus 515 ~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr 585 (740)
++. .....++||||+++++|.+++.... ....+++..++.++.|+++||+|||+ .+++||
T Consensus 85 ~~~--------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~ 153 (295)
T cd05097 85 VCV--------SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHR 153 (295)
T ss_pred EEc--------CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeecc
Confidence 885 3355899999999999999985421 11247889999999999999999998 799999
Q ss_pred CCCCCceeecCCCceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh--CCCC
Q 004637 586 NLKTENILLDKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT--GKQV 652 (740)
Q Consensus 586 DlKp~NILld~~~~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt--G~~p 652 (740)
||||+||++++++.+||+|||++...... ...+.+||... ...++.++|||||||++|||++ |..|
T Consensus 154 dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwSlG~~l~el~~~~~~~p 232 (295)
T cd05097 154 DLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESIL-LGKFTTASDVWAFGVTLWEMFTLCKEQP 232 (295)
T ss_pred ccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhc-cCCcCchhhHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999998543211 12244555443 3457899999999999999998 5677
Q ss_pred CCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 653 KSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
|........................... +...+..+.+++.+||+.||++||++.+|++.|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 233 YSLLSDEQVIENTGEFFRNQGRQIYLSQ--------TPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CcccChHHHHHHHHHhhhhccccccCCC--------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 7654433332222211111100000000 1112346779999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=315.68 Aligned_cols=232 Identities=20% Similarity=0.269 Sum_probs=178.8
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||.||+|+. .+++.||||+++... ....+.+..|..++... +||||+++++++. .++..+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~--------~~~~~~ 72 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ--------TKEHLF 72 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE--------cCCEEE
Confidence 4699999999999995 458899999998542 22334566677777654 8999999998774 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 lv~e~~~gg~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 73 FVMEYLNGGDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 99999999999999853 4468899999999999999999999 79999999999999999999999999998532
Q ss_pred C---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 612 K---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 612 ~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
. .++..+.+||... ...++.++|||||||++|||++|+.||.+.+.......+... .+ ....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~---~~-~~~~---- 217 (316)
T cd05592 147 MNGEGKASTFCGTPDYIAPEILK-GQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND---RP-HFPR---- 217 (316)
T ss_pred CCCCCccccccCCccccCHHHHc-CCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC---CC-CCCC----
Confidence 1 1344566666654 445789999999999999999999999876544433322211 10 1111
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHH-HHHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIE-DVLW 719 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~-evl~ 719 (740)
.....+.+++.+||+.||++||++. ++++
T Consensus 218 --------~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 218 --------WISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred --------CCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 1123456899999999999999876 4543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=288.32 Aligned_cols=249 Identities=22% Similarity=0.332 Sum_probs=199.6
Q ss_pred HHHhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccc----c----ChhHHHHHHHHHhhc-cCcccceeecee
Q 004637 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR----H----LPQSLMQHVELLSKL-RHRHLVSILGHC 516 (740)
Q Consensus 447 ~~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~----~----~~~~~~~Ei~il~~l-~H~nIv~l~g~~ 516 (740)
...-++|...+.+|+|..++|-++. ..+|+.+|+|++..... . ..+.-.+|+.||+++ .||+|+.+.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 3455678889999999999999887 55688999999974321 1 123456799999999 599999999876
Q ss_pred eeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC
Q 004637 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596 (740)
Q Consensus 517 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~ 596 (740)
+.+..+++|+|.|+.|.|.|+|. ..-.+++....+|++|+.+|++|||. ..||||||||+|||+|+
T Consensus 93 --------es~sF~FlVFdl~prGELFDyLt---s~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILldd 158 (411)
T KOG0599|consen 93 --------ESDAFVFLVFDLMPRGELFDYLT---SKVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDD 158 (411)
T ss_pred --------cCcchhhhhhhhcccchHHHHhh---hheeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeecc
Confidence 35667899999999999999995 46679999999999999999999999 79999999999999999
Q ss_pred CCceeEecCCCCCCCCC--------CCCCcccccccc-----CCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHH
Q 004637 597 ALTAKLSGYNIPLPSKK--------GLESPLRGQYVS-----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKL 663 (740)
Q Consensus 597 ~~~~kl~DFGla~~~~~--------~~~~~~~~~~~~-----~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~ 663 (740)
+.++||+|||+|..... |++.|.+||... ..++|+...|+||.|||||.|+.|.+||.......+..
T Consensus 159 n~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR 238 (411)
T KOG0599|consen 159 NMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLR 238 (411)
T ss_pred ccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHH
Confidence 99999999999965543 577788887542 45788999999999999999999999998655443333
Q ss_pred HHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 664 QLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.+....... ......+....+.+++.+|++.||.+|.|++|++++-
T Consensus 239 ~ImeGkyqF------------~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHp 284 (411)
T KOG0599|consen 239 MIMEGKYQF------------RSPEWADISATVKDLISRLLQVDPTKRITAKEALAHP 284 (411)
T ss_pred HHHhccccc------------CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence 333222221 1122233445567999999999999999999999754
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=315.87 Aligned_cols=231 Identities=19% Similarity=0.276 Sum_probs=180.7
Q ss_pred CeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||.||+|+.. +|+.||+|+++... ....+.+..|..++... +||||+++++++. .++..|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------~~~~~~ 72 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQ--------TKEHLF 72 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEE--------eCCEEE
Confidence 46999999999999954 68899999998542 22345667788888765 8999999998874 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 lv~E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 73 FVMEFLNGGDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred EEECCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 99999999999999853 4568899999999999999999999 79999999999999999999999999987532
Q ss_pred C---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 612 K---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 612 ~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
. .++..+.+||... ...++.++|||||||++|||++|+.||...+.......+...... ....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~----~~~~--- 218 (316)
T cd05620 147 VFGDNRASTFCGTPDYIAPEILQ-GLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPH----YPRW--- 218 (316)
T ss_pred ccCCCceeccCCCcCccCHHHHc-CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC----CCCC---
Confidence 1 2344566666654 456789999999999999999999999866554443333221111 1111
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHH-HHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIE-DVL 718 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~-evl 718 (740)
...++.+++.+||+.||++||++. +++
T Consensus 219 ---------~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 219 ---------ITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred ---------CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 123456899999999999999985 555
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=315.90 Aligned_cols=237 Identities=19% Similarity=0.237 Sum_probs=179.5
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|+.++.++ +||||+++++++. .++..+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~--------~~~~~~ 72 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ--------TESRLF 72 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEE--------eCCEEE
Confidence 4799999999999995 468899999998542 22334577899888877 7999999999875 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~E~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 73 FVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred EEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 99999999999988853 4568999999999999999999998 79999999999999999999999999998532
Q ss_pred C---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccc-----hhHHHHHHhhhcCCcccc
Q 004637 612 K---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVD-----GLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 612 ~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 677 (740)
. .++..+.+||... ...++.++|||||||++|||+||+.||...... .....+..........+
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 224 (329)
T cd05618 147 LRPGDTTSTFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI- 224 (329)
T ss_pred cCCCCccccccCCccccCHHHHc-CCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCC-
Confidence 1 1344456666654 456788999999999999999999999632111 11111111111111011
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCC------HHHHHHH
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS------IEDVLWN 720 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs------~~evl~~ 720 (740)
+......+.+++.+||+.||++||+ +.|++++
T Consensus 225 -----------p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 225 -----------PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred -----------CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 1112245669999999999999998 4676654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=303.89 Aligned_cols=235 Identities=19% Similarity=0.357 Sum_probs=180.9
Q ss_pred CeeecCCCccEEEEEecC-------------CCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCC
Q 004637 457 NLIGEGSQGQLYKGFLTD-------------GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~-------------g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~ 523 (740)
+.||+|+||.||+|+..+ ...||+|.+..........+.+|+.+++.++||||+++++++.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~------ 74 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCV------ 74 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe------
Confidence 468999999999998532 2358899887655555567889999999999999999999885
Q ss_pred CCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCc----
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT---- 599 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~---- 599 (740)
.+...++||||+++|+|..++.. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.
T Consensus 75 --~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~ 147 (262)
T cd05077 75 --RDVENIMVEEFVEFGPLDLFMHR--KSDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGEC 147 (262)
T ss_pred --cCCCCEEEEecccCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCC
Confidence 23457999999999999988853 34568999999999999999999998 79999999999999987664
Q ss_pred ---eeEecCCCCCCCCC-----CCCCccccccccCCCCCCCccceehhhHHHHHHH-hCCCCCCCCccchhHHHHHHhhh
Q 004637 600 ---AKLSGYNIPLPSKK-----GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVI-TGKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 600 ---~kl~DFGla~~~~~-----~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ell-tG~~p~~~~~~~~~~~~~~~~~~ 670 (740)
+|++|||++..... +...+.+||.......++.++|||||||++|||+ +|+.|+............ .
T Consensus 148 ~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~----~ 223 (262)
T cd05077 148 GPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFY----E 223 (262)
T ss_pred CceeEeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHH----h
Confidence 89999999854321 3344667776654566788999999999999998 588887654322211110 0
Q ss_pred cCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 671 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.. ..... .....+.+++.+||+.||++||++.||++.+
T Consensus 224 ~~----~~~~~---------~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 224 GQ----CMLVT---------PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred cC----ccCCC---------CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00 00001 0124567999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=315.77 Aligned_cols=237 Identities=20% Similarity=0.242 Sum_probs=180.9
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|..++.++ +||||+++++++. .....|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~--------~~~~~~ 72 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQ--------TESRLF 72 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEE--------cCCEEE
Confidence 4699999999999995 468899999998542 22335678899999998 6999999999874 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 lv~e~~~~g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 73 FVIEFVSGGDLMFHMQR---QRKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred EEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 99999999999998853 4568999999999999999999998 79999999999999999999999999998532
Q ss_pred ---------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccc-----hhHHHHHHhhhcCCcccc
Q 004637 612 ---------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVD-----GLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 612 ---------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 677 (740)
..++..+.+||... ...++.++|||||||++|||+||+.||...... ....+...........+.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 225 (329)
T cd05588 147 IRPGDTTSTFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP 225 (329)
T ss_pred ccCCCccccccCCccccCHHHHc-CCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC
Confidence 11334456666654 456788999999999999999999999632211 111111111111111111
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCC------HHHHHHH
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS------IEDVLWN 720 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs------~~evl~~ 720 (740)
. .....+.+++.+|++.||++||+ +.|++++
T Consensus 226 ~------------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 226 R------------SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred C------------CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 1 11234668999999999999997 6777653
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=317.49 Aligned_cols=237 Identities=19% Similarity=0.253 Sum_probs=185.0
Q ss_pred CCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
+|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+..|..++..+ +|++|+++++++. .
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------~ 72 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ--------T 72 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe--------c
Confidence 4778899999999999999854 57899999998542 22234567788888877 5889999988774 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
.+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 73 ~~~~~lv~E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 73 MDRLYFVMEYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCC
Confidence 4568999999999999998853 4568899999999999999999998 799999999999999999999999999
Q ss_pred CCCCCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 607 IPLPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 607 la~~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
+++... .++..+.+||... ...++.++|||||||++|||+||+.||...+.......+.......
T Consensus 147 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~----- 220 (323)
T cd05616 147 MCKENMWDGVTTKTFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY----- 220 (323)
T ss_pred CceecCCCCCccccCCCChhhcCHHHhc-CCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-----
Confidence 985321 2344566677654 4567899999999999999999999998765544433332211111
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCH-----HHHHH
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSI-----EDVLW 719 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~-----~evl~ 719 (740)
+.....++.+++.+|++.||++|++. .++.+
T Consensus 221 -----------p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~ 256 (323)
T cd05616 221 -----------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 256 (323)
T ss_pred -----------CCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence 11122456699999999999999984 56654
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=310.17 Aligned_cols=248 Identities=21% Similarity=0.322 Sum_probs=191.0
Q ss_pred CCCCCCeeecCCCccEEEEEec------CCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
+|++.+.||+|+||.||+|+.. ....+|+|.+..... ...+.+.+|+++++.++||||++++++|.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------- 73 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS------- 73 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-------
Confidence 4778899999999999999843 235788888864432 22457889999999999999999999874
Q ss_pred CCCCceEEEEecccCcchhhhccccc---------------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCce
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWK---------------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIF 583 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ii 583 (740)
.++..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+ .+|+
T Consensus 74 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~iv 149 (290)
T cd05045 74 -QDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLV 149 (290)
T ss_pred -cCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCee
Confidence 2345799999999999999985321 12358899999999999999999998 7999
Q ss_pred ecCCCCCceeecCCCceeEecCCCCCCCCC-----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCC
Q 004637 584 GNNLKTENILLDKALTAKLSGYNIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQ 651 (740)
Q Consensus 584 HrDlKp~NILld~~~~~kl~DFGla~~~~~-----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~ 651 (740)
||||||+||++++++.+||+|||+++.... ....+.+||.. ....++.++||||||+++|||+| |+.
T Consensus 150 H~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~-~~~~~~~~~Di~slG~~l~el~t~g~~ 228 (290)
T cd05045 150 HRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESL-FDHIYTTQSDVWSFGVLLWEIVTLGGN 228 (290)
T ss_pred hhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHH-ccCCcchHhHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999853211 11234455544 34567889999999999999999 999
Q ss_pred CCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 652 VKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 652 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
||.......+......... ...+......+.+++.+||+.+|++||++.|+++.|+.+..
T Consensus 229 p~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 229 PYPGIAPERLFNLLKTGYR---------------MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCCCCCHHHHHHHHhCCCC---------------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 9976554443333221110 00111223457799999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=324.60 Aligned_cols=250 Identities=18% Similarity=0.241 Sum_probs=185.0
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
.++|++.+.||+|+||.||+|+. .+++.||+|... .+.+.+|++++++++|||||++++++.. +.
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~--------~~ 156 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTY--------NK 156 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEE--------CC
Confidence 35799999999999999999994 568899999653 2457899999999999999999998752 34
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+. ++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 157 ~~~lv~e~~~-~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a 229 (391)
T PHA03212 157 FTCLILPRYK-TDLYCYLAA---KRNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAA 229 (391)
T ss_pred eeEEEEecCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCcc
Confidence 5899999996 689888853 3468999999999999999999999 79999999999999999999999999998
Q ss_pred CCCC----------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCcc-------chhHHHHHHhhhc
Q 004637 609 LPSK----------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEV-------DGLKLQLETCLAE 671 (740)
Q Consensus 609 ~~~~----------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~-------~~~~~~~~~~~~~ 671 (740)
+... .++..+.+||... ...++.++|||||||++|||+||+.|+..... ......+......
T Consensus 230 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~ 308 (391)
T PHA03212 230 CFPVDINANKYYGWAGTIATNAPELLA-RDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGT 308 (391)
T ss_pred cccccccccccccccCccCCCChhhhc-CCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcC
Confidence 5321 2344456666654 45678999999999999999999988653211 0111111111111
Q ss_pred CCccccc-----------------ccCccccCCC--cHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 672 APSKLRA-----------------EADPSVRGTY--AYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 672 ~~~~~~~-----------------~~~~~l~~~~--~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.+..... ...+..+..+ ..+....+.+++.+||+.||++|||++|+++.-
T Consensus 309 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp 377 (391)
T PHA03212 309 HPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFA 377 (391)
T ss_pred ChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcCh
Confidence 1100000 0000000000 112345678999999999999999999999743
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=303.94 Aligned_cols=243 Identities=21% Similarity=0.343 Sum_probs=189.9
Q ss_pred cCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
++|.+.+.||+|+||.||+|....+..||+|.+.... ...+.+.+|++++++++|||++++++++. ....
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---------~~~~ 75 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS---------EEPI 75 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc---------CCCc
Confidence 4578889999999999999998777789999886443 33467899999999999999999998762 2336
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
++||||+++|+|.++++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||.+..
T Consensus 76 ~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~ 151 (260)
T cd05069 76 YIVTEFMGKGSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARL 151 (260)
T ss_pred EEEEEcCCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceE
Confidence 8999999999999999642 23458999999999999999999998 7999999999999999999999999999854
Q ss_pred CCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 611 SKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 611 ~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
.... ...+.+||... ...++.++|||||||++|||+| |+.||...........+... ...
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~Pe~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~---~~~----- 222 (260)
T cd05069 152 IEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG---YRM----- 222 (260)
T ss_pred ccCCcccccCCCccchhhCCHHHhc-cCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC---CCC-----
Confidence 3211 11244455433 3456789999999999999999 89999765443333222211 100
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
..+.+....+.+++.+||..||++||++++|++.|+.
T Consensus 223 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 -------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0111223557799999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=339.78 Aligned_cols=257 Identities=20% Similarity=0.325 Sum_probs=195.8
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.++||+|+||.||+|+.. +|+.||||+++.... ...+++.+|++++++++||||+++++++. .
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~--------d 73 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS--------D 73 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe--------e
Confidence 57889999999999999999954 589999999975422 22457899999999999999999999875 3
Q ss_pred CCceEEEEecccCcchhhhccccc--------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWK--------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~ 598 (740)
++..++||||+++|+|.+++.... .....++..++.++.|+++||+|||+ .+|+||||||+||+++.++
T Consensus 74 ~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg 150 (932)
T PRK13184 74 GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFG 150 (932)
T ss_pred CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCC
Confidence 456899999999999999986321 12345678889999999999999999 7999999999999999999
Q ss_pred ceeEecCCCCCCCC---------------------------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCC
Q 004637 599 TAKLSGYNIPLPSK---------------------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQ 651 (740)
Q Consensus 599 ~~kl~DFGla~~~~---------------------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~ 651 (740)
.+||+|||+++... .++..+++||... ...++.++|||||||++|||+||+.
T Consensus 151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~-g~~~S~kSDIWSLGVILyELLTG~~ 229 (932)
T PRK13184 151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL-GVPASESTDIYALGVILYQMLTLSF 229 (932)
T ss_pred CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhc-CCCCCcHhHHHHHHHHHHHHHHCCC
Confidence 99999999985431 1344456666554 4457889999999999999999999
Q ss_pred CCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCC-CHHHHHHHhhhhhhcccc
Q 004637 652 VKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-SIEDVLWNLQYSIQVQEG 730 (740)
Q Consensus 652 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~~~ 730 (740)
||.......... ......+.... + ..+.+..+.+++.+|++.||++|| +++++.+.|+...+..+.
T Consensus 230 PF~~~~~~ki~~---~~~i~~P~~~~----p------~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~ 296 (932)
T PRK13184 230 PYRRKKGRKISY---RDVILSPIEVA----P------YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPE 296 (932)
T ss_pred CCCCcchhhhhh---hhhccChhhcc----c------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcc
Confidence 997643322111 11011110000 0 012234566899999999999995 778888889888775554
Q ss_pred cc
Q 004637 731 WT 732 (740)
Q Consensus 731 ~~ 732 (740)
|.
T Consensus 297 w~ 298 (932)
T PRK13184 297 WT 298 (932)
T ss_pred cc
Confidence 43
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=318.31 Aligned_cols=229 Identities=19% Similarity=0.260 Sum_probs=179.0
Q ss_pred CeeecCCCccEEEEEe----cCCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 457 NLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
+.||+|+||.||+++. .+|+.||+|+++.... .....+.+|++++++++||||+++++++. .++..
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--------~~~~~ 73 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQ--------TEGKL 73 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEE--------cCCEE
Confidence 6799999999999874 3588999999985432 23346778999999999999999998874 34568
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
|+||||+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+++.
T Consensus 74 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 74 YLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 999999999999999853 4568999999999999999999999 7999999999999999999999999999854
Q ss_pred CCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccC
Q 004637 611 SKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEAD 681 (740)
Q Consensus 611 ~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (740)
... ++..+.+||... ...++.++|||||||++|||+||+.||...+.......+..... .+...+
T Consensus 148 ~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~----~~p~~~- 221 (318)
T cd05582 148 SIDHEKKAYSFCGTVEYMAPEVVN-RRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL----GMPQFL- 221 (318)
T ss_pred cCCCCCceecccCChhhcCHHHHc-CCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC----CCCCCC-
Confidence 321 233355566544 35568899999999999999999999986554333322221111 111111
Q ss_pred ccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHH
Q 004637 682 PSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIED 716 (740)
Q Consensus 682 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~e 716 (740)
...+.+++.+||+.||++||++.+
T Consensus 222 -----------~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 222 -----------SPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -----------CHHHHHHHHHHhhcCHhHcCCCCC
Confidence 234568999999999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=314.85 Aligned_cols=232 Identities=20% Similarity=0.281 Sum_probs=181.0
Q ss_pred CeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||+||+|+.. +++.||||+++... ....+.+..|..+++.. +||||+++++++. +++..+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~--------~~~~~~ 72 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ--------TKENLF 72 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE--------eCCEEE
Confidence 46999999999999954 57899999998642 23345667788888765 8999999998875 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. ...+++.+...++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 73 FVMEYLNGGDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 99999999999999853 3568899999999999999999998 79999999999999999999999999997532
Q ss_pred C---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 612 K---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 612 ~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
. .++..+.+||... ...++.++|||||||++|||++|+.||...+.......+..... .....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~----~~~~~--- 218 (316)
T cd05619 147 MLGDAKTCTFCGTPDYIAPEILL-GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNP----CYPRW--- 218 (316)
T ss_pred CCCCCceeeecCCccccCHHHHc-CCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC----CCCcc---
Confidence 1 1344566676654 45678999999999999999999999986654443333221111 01111
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHH-HHHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIE-DVLW 719 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~-evl~ 719 (740)
....+.+++.+||+.||++||++. ++.+
T Consensus 219 ---------~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 219 ---------LTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred ---------CCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 123456899999999999999997 5543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=306.05 Aligned_cols=245 Identities=18% Similarity=0.356 Sum_probs=191.1
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CC---CEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DG---SRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g---~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
++|+..+.||+|+||.||+|+.. ++ ..+|+|.++... ....+.+.+|++++++++||||+++.+++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 76 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT-------- 76 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc--------
Confidence 46778899999999999999964 33 379999987542 233467899999999999999999999874
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
..+..++||||+++|+|.+++.. ....+++.++..++.|++.|++|||+ .+++||||||+||++++++.+|++||
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~df 151 (268)
T cd05063 77 KFKPAMIITEYMENGALDKYLRD--HDGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDF 151 (268)
T ss_pred cCCCcEEEEEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCC
Confidence 33458999999999999999964 33568999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCCCCC------------CCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcC
Q 004637 606 NIPLPSKKGL------------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 606 Gla~~~~~~~------------~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
|++....... ..+.+||+.. ...++.++|||||||++|||+| |+.||...........+.... ..
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~-~~ 229 (268)
T cd05063 152 GLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIA-YRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF-RL 229 (268)
T ss_pred ccceecccccccceeccCCCcCceecCHHHhh-cCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-CC
Confidence 9985332111 1234455443 3567889999999999999998 999997654433333322110 00
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
....+....+.+++.+||+.+|++||++.+|++.|+++
T Consensus 230 --------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 --------------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred --------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00112235677999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=302.49 Aligned_cols=264 Identities=22% Similarity=0.351 Sum_probs=191.1
Q ss_pred CCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhc--cCcccceeeceeeeeccCCCCCCCceEE
Q 004637 455 PTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL--RHRHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 455 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l--~H~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
..++||+|+||.||||.+. ++.||||++...+ .+.|..|-+|.+.. +|+||++++++-.. .......++|
T Consensus 214 l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr----~t~~~~eywL 285 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKR----GTADRMEYWL 285 (534)
T ss_pred hHHHhhcCccceeehhhcc-CceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhcc----CCccccceeE
Confidence 3578999999999999986 5899999998543 46788888877654 79999999986431 1123557999
Q ss_pred EEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCC------CCCceecCCCCCceeecCCCceeEecCC
Q 004637 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV------APGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
|+||.++|+|.+||. ...++|....+++..+++||+|||++. +++|+|||||++|||+.+|+++.|+|||
T Consensus 286 Vt~fh~kGsL~dyL~----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLK----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred EeeeccCCcHHHHHH----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 999999999999994 456999999999999999999999753 5789999999999999999999999999
Q ss_pred CCCCC-----------CCCCCCccccccccCCCCCC-----CccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhh
Q 004637 607 IPLPS-----------KKGLESPLRGQYVSNQPGDG-----AKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 607 la~~~-----------~~~~~~~~~~~~~~~~~~~~-----~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 670 (740)
+|... ..|+..|++||.+-+.-... .+.||||+|.|||||++.-..++.....+..........
T Consensus 362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG 441 (534)
T KOG3653|consen 362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVG 441 (534)
T ss_pred eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhc
Confidence 99543 23556678887765443332 357999999999999997544421111111100010000
Q ss_pred cCC--ccc-----ccccCccccCCC-cHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhcccc
Q 004637 671 EAP--SKL-----RAEADPSVRGTY-AYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQEG 730 (740)
Q Consensus 671 ~~~--~~~-----~~~~~~~l~~~~-~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (740)
..| +.+ .+...|.++..+ ....+..+.+.+..||+.||+.|.|+.=|.+++.+.....+.
T Consensus 442 ~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 442 NHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 000 000 011111111111 113355678899999999999999999999999988877764
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=319.19 Aligned_cols=264 Identities=14% Similarity=0.225 Sum_probs=193.6
Q ss_pred HHhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 448 ~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
...++|++.+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++..... .
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~ 89 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATS--I 89 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc--c
Confidence 4567899999999999999999984 568899999987532 2233567889999999999999999998753211 1
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
......|+++|++ +++|.+++. ...+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~D 161 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILD 161 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcC
Confidence 2335579999998 679988874 3458999999999999999999999 7999999999999999999999999
Q ss_pred CCCCCCCCC------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 605 YNIPLPSKK------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 605 FGla~~~~~------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
||+++.... ++..+.+||.......++.++|||||||++|||++|+.||...+.......+.......+.....
T Consensus 162 fg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T cd07878 162 FGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLK 241 (343)
T ss_pred CccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 999864322 34446677776555678899999999999999999999997654332222221111111100000
Q ss_pred ccCccc-------cCCCc--------HHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 679 EADPSV-------RGTYA--------YDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 679 ~~~~~l-------~~~~~--------~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.+.... ....+ ......+.+++.+|++.||++|||+.|++++-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp 299 (343)
T cd07878 242 KISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP 299 (343)
T ss_pred hcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 000000 00000 01122467999999999999999999999764
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=308.63 Aligned_cols=249 Identities=18% Similarity=0.321 Sum_probs=191.7
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||+|+||.||+|+.. +++.||+|.++... ....+.+.+|++++++++||||+++++++. .++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~~~ 72 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFF--------IEG 72 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhee--------cCC
Confidence 36788899999999999999964 68999999987542 223467889999999999999999999775 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++++|.+++........+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||++
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 73 AVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred eEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 6899999999999999986432344789999999999999999999963 58999999999999999999999999988
Q ss_pred CCCC-------CCCCCccccccccCC-----CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 609 LPSK-------KGLESPLRGQYVSNQ-----PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 609 ~~~~-------~~~~~~~~~~~~~~~-----~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
.... .+...+.+||..... ..++.++|||||||++|||+||+.||...........+.......+..+
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd06622 151 GNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTL 230 (286)
T ss_pred ccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCC
Confidence 5332 123345566654322 2357899999999999999999999975443333222222222111111
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
+.+....+.+++.+||+.+|++||++.|++..-
T Consensus 231 ------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~ 263 (286)
T cd06622 231 ------------PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHP 263 (286)
T ss_pred ------------CcccCHHHHHHHHHHcccCcccCCCHHHHhcCh
Confidence 112234566999999999999999999999853
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=302.14 Aligned_cols=243 Identities=22% Similarity=0.422 Sum_probs=193.2
Q ss_pred cCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
++|++.+.||+|+||.||+|... |+.||+|.++.... ..+++.+|+.++++++|+||+++++++. .....
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~~ 75 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVL--------QGNPL 75 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEc--------CCCCe
Confidence 56788999999999999999875 78999999975543 4578999999999999999999999875 24558
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
++||||+++++|.+++... ....+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||.++.
T Consensus 76 ~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~ 151 (256)
T cd05039 76 YIVTEYMAKGSLVDYLRSR-GRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKE 151 (256)
T ss_pred EEEEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccc
Confidence 9999999999999999642 22368999999999999999999998 7999999999999999999999999999865
Q ss_pred CCCC------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccccCcc
Q 004637 611 SKKG------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683 (740)
Q Consensus 611 ~~~~------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
.... ...+.+||+.. ...++.++||||||+++|||++ |+.||.......+...+... .....
T Consensus 152 ~~~~~~~~~~~~~~~ape~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~---~~~~~------- 220 (256)
T cd05039 152 ASQGQDSGKLPVKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG---YRMEA------- 220 (256)
T ss_pred cccccccCCCcccccCchhhc-CCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC---CCCCC-------
Confidence 4321 12244555543 4457789999999999999997 99999765544333322211 00001
Q ss_pred ccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 684 VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 684 l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
+...+..+.+++.+||..+|++||++.|+++.|+.
T Consensus 221 -----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 221 -----PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred -----ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 11123556799999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=318.82 Aligned_cols=239 Identities=20% Similarity=0.319 Sum_probs=194.8
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEEe
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLE 535 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~E 535 (740)
-+||+|.||+||.|+. .+...+|||.+..+..+..+-+..|+...++++|.|||+++|.|. .++++-|.||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~s--------enGf~kIFME 652 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVS--------ENGFFKIFME 652 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccC--------CCCeEEEEee
Confidence 3699999999999994 456789999998877777788999999999999999999999874 4567899999
Q ss_pred cccCcchhhhcccccCCCCC--CHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeec-CCCceeEecCCCCCC--
Q 004637 536 HISNGSLRDYLTDWKKKDML--KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD-KALTAKLSGYNIPLP-- 610 (740)
Q Consensus 536 y~~~gsL~~~l~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld-~~~~~kl~DFGla~~-- 610 (740)
-++||+|.++|+. +.+++ .+.+.-.+.+||++||.|||+ ..|||||||-+|||++ -.|.+||+|||.++.
T Consensus 653 qVPGGSLSsLLrs--kWGPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA 727 (1226)
T KOG4279|consen 653 QVPGGSLSSLLRS--KWGPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA 727 (1226)
T ss_pred cCCCCcHHHHHHh--ccCCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhc
Confidence 9999999999974 55666 788889999999999999999 6999999999999996 679999999998743
Q ss_pred -------CCCCCCCccccccccCC-CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 611 -------SKKGLESPLRGQYVSNQ-PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 611 -------~~~~~~~~~~~~~~~~~-~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
...|+..|++||..-.+ .+|+.++|||||||++.||.||++||........ .+.+..+...
T Consensus 728 ginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA-AMFkVGmyKv---------- 796 (1226)
T KOG4279|consen 728 GINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA-AMFKVGMYKV---------- 796 (1226)
T ss_pred cCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH-hhhhhcceec----------
Confidence 23466778888887544 4789999999999999999999999985432211 1111111111
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
-+..+.+...+...+|.+|+.+||.+||++.+++++-
T Consensus 797 --HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~Dp 833 (1226)
T KOG4279|consen 797 --HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDP 833 (1226)
T ss_pred --CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCc
Confidence 1223455566778999999999999999999999753
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=325.17 Aligned_cols=243 Identities=19% Similarity=0.311 Sum_probs=196.1
Q ss_pred CCeeecCCCccEEEEE-ecCCC----EEEEEEeecc-cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 456 TNLIGEGSQGQLYKGF-LTDGS----RVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~-~~~g~----~vAvK~l~~~-~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.++||+|+||+||||. .++|+ +||+|++... ..+..+++.+|+-+|.+++|||+++++|+|.. ..
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~---------s~ 771 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML---------ST 771 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc---------ch
Confidence 5799999999999998 45543 6899988754 34456789999999999999999999999962 22
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
+.||++||+.|+|.||++. .+..+.....+.|..|||+||.|||. ++++||||..+|||+.+-..+||.|||+++
T Consensus 772 ~qlvtq~mP~G~LlDyvr~--hr~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ 846 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVRE--HRDNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAK 846 (1177)
T ss_pred HHHHHHhcccchHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhh
Confidence 7899999999999999985 45668888999999999999999998 799999999999999999999999999997
Q ss_pred CCCCCCCCccccc----------cccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 610 PSKKGLESPLRGQ----------YVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 610 ~~~~~~~~~~~~~----------~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
........+.++. +....+.|+.++|||||||++||++| |..|+.+...+++...++...+
T Consensus 847 ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-------- 918 (1177)
T KOG1025|consen 847 LLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-------- 918 (1177)
T ss_pred ccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc--------
Confidence 6554433332221 11224678999999999999999999 9999998777666555433211
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhc
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQV 727 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (740)
-..+..+...+..++.+||..|++.||+++++.....+....
T Consensus 919 -------LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 919 -------LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred -------CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 112334456677899999999999999999999988876543
|
|
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=307.99 Aligned_cols=253 Identities=18% Similarity=0.294 Sum_probs=188.2
Q ss_pred cCCCCCCeeecCCCccEEEEEec-----------------CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCccccee
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-----------------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSI 512 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-----------------~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l 512 (740)
++|++.+.||+|+||.||++... ++..||+|.++... ....+++.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56889999999999999998532 23468999987542 2334678999999999999999999
Q ss_pred eceeeeeccCCCCCCCceEEEEecccCcchhhhcccccC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcee
Q 004637 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK--------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFG 584 (740)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH 584 (740)
++++. .++..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+ .+|+|
T Consensus 85 ~~~~~--------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H 153 (296)
T cd05095 85 LAVCI--------TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVH 153 (296)
T ss_pred EEEEe--------cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeec
Confidence 99875 23458999999999999999864221 1347888999999999999999998 79999
Q ss_pred cCCCCCceeecCCCceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh--CCC
Q 004637 585 NNLKTENILLDKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT--GKQ 651 (740)
Q Consensus 585 rDlKp~NILld~~~~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt--G~~ 651 (740)
|||||+||+++.++.+||+|||+++..... ...+.+||... ...++.++|||||||++|||+| |..
T Consensus 154 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~DiwSlG~~l~el~~~~~~~ 232 (296)
T cd05095 154 RDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL-LGKFTTASDVWAFGVTLWEILTLCKEQ 232 (296)
T ss_pred ccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHh-cCCccchhhhhHHHHHHHHHHHhCCCC
Confidence 999999999999999999999998643211 11234444433 3457889999999999999998 678
Q ss_pred CCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 652 VKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 652 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
||................... ......+ .+..+...+.+++.+||+.||++||++.||++.|++
T Consensus 233 p~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 233 PYSQLSDEQVIENTGEFFRDQ---GRQVYLP-----KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred CccccChHHHHHHHHHHHhhc---cccccCC-----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 886544333222211111110 0000000 011223567799999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=312.79 Aligned_cols=251 Identities=18% Similarity=0.341 Sum_probs=194.3
Q ss_pred hcCCCCCCeeecCCCccEEEEEec--------CCCEEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceeeee
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~ 519 (740)
.++|.+.+.||+|+||.||+|+.. +...+|+|.++... .....++.+|+++++++ +||||++++++|.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-- 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-- 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe--
Confidence 357889999999999999999742 23579999987542 22345688899999999 7999999999885
Q ss_pred ccCCCCCCCceEEEEecccCcchhhhcccccC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecC
Q 004637 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (740)
Q Consensus 520 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD 586 (740)
.++..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+ .+++|||
T Consensus 95 ------~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~d 165 (307)
T cd05098 95 ------QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRD 165 (307)
T ss_pred ------cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCccccc
Confidence 33458999999999999999975321 2358999999999999999999998 7999999
Q ss_pred CCCCceeecCCCceeEecCCCCCCCCC---------C--CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCC
Q 004637 587 LKTENILLDKALTAKLSGYNIPLPSKK---------G--LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKS 654 (740)
Q Consensus 587 lKp~NILld~~~~~kl~DFGla~~~~~---------~--~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~ 654 (740)
|||+||+++.++.+||+|||.+..... + ...+.+||... ...++.++|||||||++|||++ |+.||.
T Consensus 166 lkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~el~~~g~~p~~ 244 (307)
T cd05098 166 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYP 244 (307)
T ss_pred ccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhc-cCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999853321 1 12345555543 3457889999999999999998 888987
Q ss_pred CCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhc
Q 004637 655 TSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQV 727 (740)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (740)
..........+.... . . ..+.....++.+++.+||..+|++||++.||++.|+++.+.
T Consensus 245 ~~~~~~~~~~~~~~~---~---~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 245 GVPVEELFKLLKEGH---R---M---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred cCCHHHHHHHHHcCC---C---C---------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 655443333222111 0 0 01112234667899999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=307.89 Aligned_cols=238 Identities=20% Similarity=0.248 Sum_probs=181.3
Q ss_pred eecCCCccEEEEEe-cCCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEE
Q 004637 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (740)
Q Consensus 459 iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~ 534 (740)
||+|+||+||++.. .+++.||+|.+..... ...+.+..|++++++++||||+++.+++. .+...++||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~--------~~~~~~lv~ 72 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ--------TKTDLCLVM 72 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc--------CCCeEEEEE
Confidence 69999999999985 4689999999975422 22356788999999999999999988764 345689999
Q ss_pred ecccCcchhhhcccc-cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCC-
Q 004637 535 EHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK- 612 (740)
Q Consensus 535 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~- 612 (740)
||+++|+|.+++... .....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++....
T Consensus 73 e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 73 TIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKD 149 (280)
T ss_pred eCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence 999999999887532 234568999999999999999999999 799999999999999999999999999985322
Q ss_pred --------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccc
Q 004637 613 --------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSV 684 (740)
Q Consensus 613 --------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 684 (740)
.++..+.+||... ...++.++|||||||++|||++|+.||...........+.......+.
T Consensus 150 ~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------- 218 (280)
T cd05608 150 GQSKTKGYAGTPGFMAPELLQ-GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV---------- 218 (280)
T ss_pred CCccccccCCCcCccCHHHhc-CCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC----------
Confidence 2334456666654 456788999999999999999999999754332211111111111110
Q ss_pred cCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 004637 685 RGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 685 ~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 720 (740)
.++......+.+++.+||+.||++|| +++|++++
T Consensus 219 --~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 219 --TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred --CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 01112234566999999999999999 67777764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=323.80 Aligned_cols=253 Identities=19% Similarity=0.289 Sum_probs=191.1
Q ss_pred HHHhcCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeecccc-cChhHHHHHHHHHhhcc-Ccccceeeceeee
Q 004637 447 EEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLR-HRHLVSILGHCIL 518 (740)
Q Consensus 447 ~~~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~ 518 (740)
....++|.+.+.||+|+||.||+|++. .++.||||+++.... ...+.+.+|++++.++. |||||+++|+|.
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~- 111 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT- 111 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc-
Confidence 334456778899999999999999853 246899999975432 22357889999999997 999999999885
Q ss_pred eccCCCCCCCceEEEEecccCcchhhhcccccC-----------------------------------------------
Q 004637 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK----------------------------------------------- 551 (740)
Q Consensus 519 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~----------------------------------------------- 551 (740)
..+..++||||+++|+|.++++....
T Consensus 112 -------~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T cd05107 112 -------KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKD 184 (401)
T ss_pred -------cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCc
Confidence 23458999999999999999864211
Q ss_pred ------------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCce
Q 004637 552 ------------------------------------------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIF 583 (740)
Q Consensus 552 ------------------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ii 583 (740)
...+++.....++.|+++||+|||+ .+|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~iv 261 (401)
T cd05107 185 ESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCV 261 (401)
T ss_pred cccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcC
Confidence 1246788899999999999999998 7999
Q ss_pred ecCCCCCceeecCCCceeEecCCCCCCCCC-----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCC
Q 004637 584 GNNLKTENILLDKALTAKLSGYNIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQ 651 (740)
Q Consensus 584 HrDlKp~NILld~~~~~kl~DFGla~~~~~-----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~ 651 (740)
||||||+|||+++++.+||+|||+++.... +...+++||... ...++.++|||||||++|||++ |+.
T Consensus 262 Hrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslGvil~e~l~~g~~ 340 (401)
T cd05107 262 HRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIF-NNLYTTLSDVWSFGILLWEIFTLGGT 340 (401)
T ss_pred cccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhc-CCCCCcHhHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999853211 112244555544 3456889999999999999998 888
Q ss_pred CCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhh
Q 004637 652 VKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSI 725 (740)
Q Consensus 652 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (740)
||......+...... ..... ...+.....++.+++.+||..+|++||+++||++.|+.+.
T Consensus 341 P~~~~~~~~~~~~~~--~~~~~------------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 341 PYPELPMNEQFYNAI--KRGYR------------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CCCCCCchHHHHHHH--HcCCC------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 987543322211111 01100 0011112346779999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=302.17 Aligned_cols=237 Identities=18% Similarity=0.301 Sum_probs=183.8
Q ss_pred eeecCCCccEEEEEec---CCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEE
Q 004637 458 LIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533 (740)
Q Consensus 458 ~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV 533 (740)
.||+|+||.||+|++. ++..||+|++..... ...+.+.+|++++++++||||++++++|. ....++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~---------~~~~~lv 72 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE---------AEALMLV 72 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc---------CCCeEEE
Confidence 3899999999999753 355799999875432 23467899999999999999999999773 2347999
Q ss_pred EecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCC
Q 004637 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK 613 (740)
Q Consensus 534 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~ 613 (740)
|||+++|+|.+++.. ....+++..+.+++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 73 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 73 MEMASGGPLNKFLSG--KKDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGA 147 (257)
T ss_pred EEeCCCCCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccC
Confidence 999999999999863 34568999999999999999999998 7999999999999999999999999999853221
Q ss_pred C------------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 614 G------------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 614 ~------------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
. ...+.+||... ...++.++|||||||++||+++ |+.||...........+.... .
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~------- 216 (257)
T cd05115 148 DDSYYKARSAGKWPLKWYAPECIN-FRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK---R------- 216 (257)
T ss_pred CccceeccCCCCCCcccCCHHHHc-cCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC---C-------
Confidence 1 12244555443 3456889999999999999996 999998654433322222111 0
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
...+..+..++.+++.+||..||++||++.+|.+.|+..
T Consensus 217 -----~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 217 -----LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 001112235667999999999999999999999998854
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=305.29 Aligned_cols=249 Identities=20% Similarity=0.298 Sum_probs=189.7
Q ss_pred HHHHhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 446 IEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 446 l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
++.+++.+.....||+|+||.||+|+. .++..||+|.+........+.+.+|++++++++|+||+++++++.
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------- 75 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS------- 75 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeec-------
Confidence 344566777778999999999999994 467889999987665555578999999999999999999999875
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCC--CHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC-CCcee
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDML--KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAK 601 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~-~~~~k 601 (740)
.++..++|+||+++++|.+++... ...+ ++..+..++.|+++||+|||+ .+|+||||||+||+++. ++.+|
T Consensus 76 -~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~ 149 (268)
T cd06624 76 -ENGFFKIFMEQVPGGSLSALLRSK--WGPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVK 149 (268)
T ss_pred -cCCEEEEEEecCCCCCHHHHHHHh--cccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEE
Confidence 345689999999999999999642 2334 788889999999999999998 79999999999999986 67999
Q ss_pred EecCCCCCCCC---------CCCCCccccccccCC-CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhc
Q 004637 602 LSGYNIPLPSK---------KGLESPLRGQYVSNQ-PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE 671 (740)
Q Consensus 602 l~DFGla~~~~---------~~~~~~~~~~~~~~~-~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~ 671 (740)
|+|||.+.... .+...+.+||+.... ..++.++|||||||++|||++|+.||..........+... ...
T Consensus 150 l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~-~~~ 228 (268)
T cd06624 150 ISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVG-MFK 228 (268)
T ss_pred EecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhh-hhc
Confidence 99999874321 123345566665432 3467899999999999999999999975332211111110 000
Q ss_pred CCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 672 ~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
. .+ ..+......+.+++.+||+.+|++|||+.|++++
T Consensus 229 ~--------~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 229 I--------HP----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred c--------CC----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 0 00 1111223456689999999999999999999864
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=321.36 Aligned_cols=251 Identities=15% Similarity=0.231 Sum_probs=190.9
Q ss_pred HHHHHHhcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeee
Q 004637 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILT 519 (740)
Q Consensus 444 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~ 519 (740)
.++....++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-- 113 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-- 113 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--
Confidence 344556688999999999999999999954 68899999987432 223356788999999999999999998774
Q ss_pred ccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCc
Q 004637 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (740)
Q Consensus 520 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~ 599 (740)
.+...++||||+++|+|.+++.. ..++...+..++.|++.||+|||+ .+|+||||||+|||++.++.
T Consensus 114 ------~~~~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ 180 (371)
T cd05622 114 ------DDRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGH 180 (371)
T ss_pred ------cCCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCC
Confidence 34668999999999999999853 347888889999999999999999 79999999999999999999
Q ss_pred eeEecCCCCCCCC----------CCCCCccccccccCC---CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHH
Q 004637 600 AKLSGYNIPLPSK----------KGLESPLRGQYVSNQ---PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLE 666 (740)
Q Consensus 600 ~kl~DFGla~~~~----------~~~~~~~~~~~~~~~---~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~ 666 (740)
+||+|||+++... .++..+++||..... ..++.++|||||||++|||++|+.||...+.......+.
T Consensus 181 ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~ 260 (371)
T cd05622 181 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 260 (371)
T ss_pred EEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9999999985321 244456677765432 237889999999999999999999998765433322222
Q ss_pred HhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCC--CCCHHHHHHHh
Q 004637 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAK--RPSIEDVLWNL 721 (740)
Q Consensus 667 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~~L 721 (740)
...... ... + ..+....+.+++.+|+..++.+ ||+++|++++.
T Consensus 261 ~~~~~~--~~~---~-------~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 261 NHKNSL--TFP---D-------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred cCCCcc--cCC---C-------cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 111000 000 0 0112344568999999844433 78999999865
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=311.31 Aligned_cols=257 Identities=19% Similarity=0.282 Sum_probs=192.5
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||+|+||.||+|+.. +++.||+|.++... ......+.+|++++++++||||+++++++. .++
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~--------~~~ 77 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH--------TEK 77 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEe--------cCC
Confidence 56888999999999999999854 68899999997543 333456789999999999999999999875 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||++ ++|.+++.. ....+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 78 ~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 151 (301)
T cd07873 78 SLTLVFEYLD-KDLKQYLDD--CGNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLA 151 (301)
T ss_pred eEEEEEeccc-cCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcch
Confidence 6899999997 599988864 23458899999999999999999999 79999999999999999999999999998
Q ss_pred CCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcc-ccc
Q 004637 609 LPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK-LRA 678 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 678 (740)
..... +...+.+||.......++.++|||||||++|||+||+.||...+.......+.......... +..
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (301)
T cd07873 152 RAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPG 231 (301)
T ss_pred hccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchh
Confidence 54221 22335566665555567889999999999999999999998665443333222222111110 100
Q ss_pred ccC---------ccccCC----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 679 EAD---------PSVRGT----YAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 679 ~~~---------~~l~~~----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
..+ +..... ........+.+++.+|++.||++|||++|++++-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~ 287 (301)
T cd07873 232 ILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHP 287 (301)
T ss_pred hhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 000 000000 0111234567999999999999999999999743
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=304.83 Aligned_cols=245 Identities=19% Similarity=0.341 Sum_probs=189.8
Q ss_pred cCCCCCCeeecCCCccEEEEEec-C---CCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-D---GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~---g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
++|++.+.||+|+||.||+|+.. + +..+|+|.++... ....+.+.+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 75 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-------- 75 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe--------
Confidence 46788899999999999999853 2 3479999887532 223467899999999999999999999874
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.++..++||||+++|+|.+++.. ....+++.++..++.|++.||+|||+ .+++||||||+||+++.++.+|++||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~df 150 (267)
T cd05066 76 KSKPVMIVTEYMENGSLDAFLRK--HDGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDF 150 (267)
T ss_pred cCCccEEEEEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCC
Confidence 34568999999999999999964 23468999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCCCCC------------CCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcC
Q 004637 606 NIPLPSKKGL------------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 606 Gla~~~~~~~------------~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
|++....... ..+.+||+.. ...++.++|||||||++||+++ |+.||......+....+..... .
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~-~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-~ 228 (267)
T cd05066 151 GLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR-L 228 (267)
T ss_pred CcccccccccceeeecCCCccceeecCHhHhc-cCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc-C
Confidence 9985432211 1234455443 3457889999999999999887 9999976544333332221100 0
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
+ .....+..+.+++.+|++.+|++||+|.++++.|+++
T Consensus 229 ~--------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 P--------------APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred C--------------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0 0111234567999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=310.27 Aligned_cols=262 Identities=19% Similarity=0.274 Sum_probs=191.9
Q ss_pred cCCCCCCeeecCCCccEEEEEec-----CCCEEEEEEeeccccc-ChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-----DGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~~-~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
++|+..+.||+|+||.||+|++. ++..||||.++..... ..+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~----- 78 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP----- 78 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecC-----
Confidence 35677899999999999999853 3678999999855432 456899999999999999999999987531
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
.+...++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 79 -~~~~~~lv~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~d 152 (284)
T cd05038 79 -GGRSLRLIMEYLPSGSLRDYLQR--HRDQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISD 152 (284)
T ss_pred -CCCceEEEEecCCCCCHHHHHHh--CccccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcc
Confidence 24568999999999999999964 23358999999999999999999998 7999999999999999999999999
Q ss_pred CCCCCCCCCC------------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC
Q 004637 605 YNIPLPSKKG------------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 605 FGla~~~~~~------------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
||.+...... ...+.+||... ...++.++||||||+++|||+||+.|+...................
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd05038 153 FGLAKVLPEDKDYYYVKEPGESPIFWYAPECLR-TSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMI 231 (284)
T ss_pred cccccccccCCcceeccCCCCCcccccCcHHHc-cCCCCcccchHHHhhhhheeeccCCCcccccchhcccccccccccc
Confidence 9998654311 11234455443 3456789999999999999999999986432211100000000000
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
...+.+..........+..+..++.+++.+||+.+|++|||+.||+++|+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 232 VTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 0000000000001111122335678999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=307.96 Aligned_cols=257 Identities=19% Similarity=0.300 Sum_probs=189.8
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|+||.||+|+. .+++.||||.++... ....+.+.+|+.++++++||||+++++++. .+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 72 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM--------QES 72 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe--------eCC
Confidence 477889999999999999995 468999999987542 223467889999999999999999999885 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||++ ++|.+++........+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 73 ~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 73 RLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred eEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccce
Confidence 6899999997 5898888654444678999999999999999999998 79999999999999999999999999987
Q ss_pred CCCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc---
Q 004637 609 LPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL--- 676 (740)
Q Consensus 609 ~~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 676 (740)
.... .+...+.+||.......++.++|||||||++|||+||+.||.......................
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (285)
T cd07861 149 RAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPG 228 (285)
T ss_pred eecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhc
Confidence 5321 1233456677665555678899999999999999999999986543221111111100000000
Q ss_pred -------ccccCcccc---CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 677 -------RAEADPSVR---GTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 677 -------~~~~~~~l~---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
....+.... .........++.+++.+||+.||++|||+.||++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 229 VTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred chhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000000 00001123456799999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=304.97 Aligned_cols=250 Identities=18% Similarity=0.284 Sum_probs=191.8
Q ss_pred cCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||.||+|+ ..+++.||||.+.... ....+++.+|+++++.++||||+++++++. .
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------~ 73 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI--------E 73 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE--------e
Confidence 467888999999999999999 4578999999886532 223357889999999999999999999885 3
Q ss_pred CCceEEEEecccCcchhhhccccc-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
++..+++|||+++++|.+++.... ....+++..+..++.|+++||+|||+ .+++|+||||+||+++.++.++++||
T Consensus 74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df 150 (267)
T cd08229 74 DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcc
Confidence 356899999999999999886422 24568999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 606 NIPLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 606 Gla~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|++..... +...+.+||... ...++.++||||||+++|||++|..||...... ...........
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~ape~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~----- 223 (267)
T cd08229 151 GLGRFFSSKTTAAHSLVGTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEQC----- 223 (267)
T ss_pred hhhhccccCCcccccccCCcCccCHHHhc-CCCccchhhHHHHHHHHHHHHhCCCCcccccch-HHHHhhhhhcC-----
Confidence 98753321 222344555543 445678999999999999999999999754322 11111111100
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
..+... .......+.+++.+||+.||++||||.+|++.+++.
T Consensus 224 ---~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 224 ---DYPPLP---SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred ---CCCCCC---cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 001000 112334577999999999999999999999988764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=310.77 Aligned_cols=252 Identities=17% Similarity=0.330 Sum_probs=194.9
Q ss_pred hcCCCCCCeeecCCCccEEEEEec--------CCCEEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceeeee
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~ 519 (740)
.++|++.+.||+|+||.||+|+.. ++..||+|.++... ....+++.+|+.+++.+ +||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-- 91 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 91 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe--
Confidence 456788899999999999999731 24579999987432 23346789999999999 8999999999875
Q ss_pred ccCCCCCCCceEEEEecccCcchhhhcccccC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecC
Q 004637 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (740)
Q Consensus 520 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD 586 (740)
.....++||||+++|+|.+++..... ...+++.++..++.|+++||+|||+ .+|+|||
T Consensus 92 ------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~d 162 (304)
T cd05101 92 ------QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRD 162 (304)
T ss_pred ------cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecc
Confidence 23458999999999999999965321 2357899999999999999999998 7999999
Q ss_pred CCCCceeecCCCceeEecCCCCCCCCC-----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCC
Q 004637 587 LKTENILLDKALTAKLSGYNIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKS 654 (740)
Q Consensus 587 lKp~NILld~~~~~kl~DFGla~~~~~-----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~ 654 (740)
|||+||++++++.+||+|||.++.... +...+.+||... ...++.++|||||||++|||+| |..||.
T Consensus 163 lkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~ 241 (304)
T cd05101 163 LAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYP 241 (304)
T ss_pred cccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhc-cCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 999999999999999999999854321 112245555543 4557889999999999999998 788887
Q ss_pred CCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhcc
Q 004637 655 TSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQ 728 (740)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (740)
..........+..... . ..+..+...+.+++.+||+.+|++||++.|+++.|+++....
T Consensus 242 ~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 242 GIPVEELFKLLKEGHR-----M----------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred cCCHHHHHHHHHcCCc-----C----------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 6554443333221110 0 001123356779999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=306.37 Aligned_cols=240 Identities=17% Similarity=0.215 Sum_probs=181.1
Q ss_pred eecCCCccEEEEEe-cCCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEE
Q 004637 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (740)
Q Consensus 459 iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~ 534 (740)
||+|+||.||+++. .+|+.||+|.+..... ...+.+..|++++++++||||+++++++. .+...++||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~--------~~~~~~lv~ 72 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE--------SKTHLCLVM 72 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe--------cCCeEEEEE
Confidence 69999999999985 4689999999974321 22345667999999999999999988774 345689999
Q ss_pred ecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCC--
Q 004637 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK-- 612 (740)
Q Consensus 535 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~-- 612 (740)
||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 73 e~~~g~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 73 SLMNGGDLKYHIYNV-GERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred ecCCCCCHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 999999999888542 33458899999999999999999998 799999999999999999999999999875322
Q ss_pred ------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccC
Q 004637 613 ------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRG 686 (740)
Q Consensus 613 ------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 686 (740)
.++..+.+||.... ..++.++|||||||++|||++|+.||...........+....... ... ... .
T Consensus 149 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~-~~~----~ 220 (277)
T cd05607 149 KTITQRAGTNGYMAPEILKE-EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED--EVK-FEH----Q 220 (277)
T ss_pred ceeeccCCCCCccCHHHHcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc--ccc-ccc----c
Confidence 23445666776543 448899999999999999999999997543221111111111110 000 000 0
Q ss_pred CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 687 TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 687 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
....++.+++.+||+.||++||++.|+++.+.
T Consensus 221 ----~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 221 ----NFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred ----cCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 11234679999999999999999977765443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=314.19 Aligned_cols=233 Identities=22% Similarity=0.277 Sum_probs=183.0
Q ss_pred CeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||+||+|+.. +++.||||+++... ......+.+|.++++.+ +||||+++++++. ..+..|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~--------~~~~~~ 72 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ--------TKDRLF 72 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE--------cCCEEE
Confidence 46999999999999854 57899999998542 23345677899999888 6999999999874 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 73 FVMEYVNGGDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred EEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 99999999999998853 4468999999999999999999998 79999999999999999999999999987532
Q ss_pred C---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 612 K---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 612 ~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
. .++..+.+||... ...++.++|||||||++|||+||+.||...+.......+..... ..
T Consensus 147 ~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~----~~------ 215 (318)
T cd05570 147 ILGGVTTSTFCGTPDYIAPEILS-YQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV----RY------ 215 (318)
T ss_pred CcCCCcccceecCccccCHHHhc-CCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC----CC------
Confidence 1 1334455666654 45678899999999999999999999986554433322211110 01
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCH-----HHHHHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSI-----EDVLWN 720 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~-----~evl~~ 720 (740)
+......+.+++.+||+.||++||++ .++++.
T Consensus 216 ------~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 216 ------PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred ------CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 11122456799999999999999999 888764
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=306.07 Aligned_cols=252 Identities=21% Similarity=0.351 Sum_probs=191.6
Q ss_pred HHhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCC
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 448 ~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~ 525 (740)
.+.+.|++.+.||+|+||.||+|+. .+++.||+|++.... .....+.+|+.+++++ +||||+++++++..... ..
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~--~~ 79 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP--PG 79 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC--CC
Confidence 3567788889999999999999985 468899999987543 3446788999999999 69999999999864321 12
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.....++||||+++|+|.+++... ....+++..+..++.|++.|++|||+ .+|+||||||+||++++++.+||+||
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccC
Confidence 235689999999999999998642 23468999999999999999999999 79999999999999999999999999
Q ss_pred CCCCCCC---------CCCCCccccccccC----CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC
Q 004637 606 NIPLPSK---------KGLESPLRGQYVSN----QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 606 Gla~~~~---------~~~~~~~~~~~~~~----~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
|++.... .++..+.+||+... ...++.++|||||||++|||++|+.||............. ..
T Consensus 156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~----~~ 231 (272)
T cd06637 156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP----RN 231 (272)
T ss_pred CCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHh----cC
Confidence 9985332 12333556666542 2356789999999999999999999997433221111110 00
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+ ..... .......+.+++.+||..||++|||+.|+++.
T Consensus 232 ~--~~~~~--------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 232 P--APRLK--------SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred C--CCCCC--------CCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 0 00001 11123457799999999999999999999863
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=311.25 Aligned_cols=257 Identities=18% Similarity=0.290 Sum_probs=192.0
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||+|+||.||+++. .++..+|+|.++... .....++.+|++++++++||||++++++|. .++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~ 72 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY--------SDG 72 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--------eCC
Confidence 4688899999999999999984 468889999887542 223456889999999999999999999885 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++|+|.++++. ...+++..+..++.|+++||.|||+. .+++||||||+||+++.++.+||+|||++
T Consensus 73 ~~~lv~ey~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 73 EISICMEHMDGGSLDQVLKK---AGRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred EEEEEeeccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCc
Confidence 68999999999999999953 35688999999999999999999972 48999999999999999999999999987
Q ss_pred CCCCC-------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc-----
Q 004637 609 LPSKK-------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL----- 676 (740)
Q Consensus 609 ~~~~~-------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 676 (740)
..... +...+.+||... ...++.++|||||||++|||+||+.||...+...................
T Consensus 148 ~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (308)
T cd06615 148 GQLIDSMANSFVGTRSYMSPERLQ-GTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPV 226 (308)
T ss_pred ccccccccccCCCCcCccChhHhc-CCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccc
Confidence 54321 233455566543 45578899999999999999999999975543332222211110000000
Q ss_pred --------------------ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 677 --------------------RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 677 --------------------~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
.....+.+. .......+.+++.+||..||++||++.|+++..-..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~ 291 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLP---SGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIK 291 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCc---CcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence 000000000 001234577999999999999999999999886543
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-35 Score=301.33 Aligned_cols=250 Identities=19% Similarity=0.298 Sum_probs=193.7
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+||+++++++. .
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~--------~ 73 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI--------E 73 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee--------c
Confidence 57899999999999999999965 79999999987432 233567899999999999999999999875 3
Q ss_pred CCceEEEEecccCcchhhhccccc-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
++..++||||+++|+|.+++.... ....+++.++..++.|+++||+|||+ .+|+||||||+||+++.++.++|+||
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~ 150 (267)
T cd08224 74 NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEecc
Confidence 356899999999999999986432 24558999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 606 NIPLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 606 Gla~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|++..... +...+.+||+.. ...++.++|||||||++|||++|+.||...... ............ .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~---~ 225 (267)
T cd08224 151 GLGRFFSSKTTAAHSLVGTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEKCD---Y 225 (267)
T ss_pred ceeeeccCCCcccceecCCccccCHHHhc-cCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc-HHHHHhhhhcCC---C
Confidence 98753221 222344556543 455788999999999999999999999654321 111111111100 0
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
.. .. .......+.+++.+||..+|++||++.+|++.|+.+
T Consensus 226 ~~-----~~---~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 226 PP-----LP---ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred CC-----CC---hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 00 00 112234567999999999999999999999999865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=315.88 Aligned_cols=228 Identities=22% Similarity=0.295 Sum_probs=176.1
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHH-HHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVE-LLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~-il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||+||+|+. .+|+.||||++.... ......+.+|.. +++.++||||+++++++. .++..+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~--------~~~~~~ 72 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ--------TADKLY 72 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEE--------eCCEEE
Confidence 4699999999999995 468999999997542 222344555555 567899999999998774 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 73 FVLDYVNGGELFFHLQR---ERSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred EEEcCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 99999999999999853 4568899999999999999999998 79999999999999999999999999998532
Q ss_pred C---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 612 K---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 612 ~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
. .++..+.+||... ...++.++|||||||++|||++|+.||...+.......+.. .+.......
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~----~~~~~~~~~-- 219 (323)
T cd05575 147 IEHSKTTSTFCGTPEYLAPEVLR-KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN----KPLRLKPNI-- 219 (323)
T ss_pred ccCCCccccccCChhhcChhhhc-CCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc----CCCCCCCCC--
Confidence 1 1334456666654 45678899999999999999999999986554333222211 111111111
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIE 715 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ 715 (740)
...+.+++.+|++.||++||++.
T Consensus 220 ----------~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 220 ----------SVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ----------CHHHHHHHHHHhhcCHHhCCCCC
Confidence 23466899999999999999884
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=306.81 Aligned_cols=246 Identities=17% Similarity=0.273 Sum_probs=189.6
Q ss_pred hcCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~ 522 (740)
.++|++.+.||+|+||.||+|... .+..||+|.+.... ......+.+|+.++++++|+||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----- 79 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSF----- 79 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----
Confidence 467888999999999999999864 35679999886443 223457899999999999999999999875
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccC----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKK----KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~ 598 (740)
.....++||||+++|+|.+++..... ...++|..++.++.||++||+|||+ .+++||||||+||+++.++
T Consensus 80 ---~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~ 153 (277)
T cd05036 80 ---ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKG 153 (277)
T ss_pred ---cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccC
Confidence 23457999999999999999865321 2358999999999999999999999 7999999999999998754
Q ss_pred ---ceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHH
Q 004637 599 ---TAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKL 663 (740)
Q Consensus 599 ---~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~ 663 (740)
.+||+|||+++..... ...+.+||+.. ...++.++|||||||++|||++ |+.||..........
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~ 232 (277)
T cd05036 154 PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFL-DGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVME 232 (277)
T ss_pred CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHh-cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 6999999998643211 11244555543 4567899999999999999997 999998654433332
Q ss_pred HHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 664 QLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
.+... .. ...+......+.+++.+|++.+|++||++.||++.|+
T Consensus 233 ~~~~~---~~------------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 233 FVTGG---GR------------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHcC---Cc------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 22111 00 0011122346779999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=306.47 Aligned_cols=260 Identities=21% Similarity=0.286 Sum_probs=188.3
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhc---cCcccceeeceeeeeccCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKL---RHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l---~H~nIv~l~g~~~~~~~~~~~ 525 (740)
+|++.+.||+|+||+||+|+. .+++.||+|.++... ......+.+|+++++++ +||||+++++++.... ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~---~~ 77 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSR---TD 77 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeecccc---CC
Confidence 478889999999999999985 468999999987542 22234567788877766 6999999999875321 12
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.....++||||+++ +|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 78 ~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 78 RETKVTLVFEHVDQ-DLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred CCceEEEEEccccc-CHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcc
Confidence 34568999999985 898888642 23458999999999999999999999 79999999999999999999999999
Q ss_pred CCCCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhc-CCccc
Q 004637 606 NIPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE-APSKL 676 (740)
Q Consensus 606 Gla~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~~ 676 (740)
|++..... ++..+.+||... ...++.++|||||||++|||++|++||......+....+...... ....+
T Consensus 153 g~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 153 GLARIYSCQMALTPVVVTLWYRAPEVLL-QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred CccccccCcccCCCccccccccCchHhh-CCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhC
Confidence 99864321 233456666654 456789999999999999999999999765443322222211110 00000
Q ss_pred cc-------ccCcccc---CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 677 RA-------EADPSVR---GTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 677 ~~-------~~~~~l~---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.. ...+... .....+....+.+++.+|++.||++|||+.|++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 0000000 00011223456799999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=301.21 Aligned_cols=241 Identities=23% Similarity=0.310 Sum_probs=189.5
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecc--cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|+||.||+|+. .+++.|++|.+... .....+.+.+|++++++++||||+++++++. .++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 72 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL--------DKG 72 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec--------cCC
Confidence 477789999999999999995 46899999998754 2334567889999999999999999999875 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++++|.++++.. ....+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 73 KLNIVMEYAENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred EEEEEEEeCCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccc
Confidence 689999999999999999753 24568999999999999999999998 79999999999999999999999999987
Q ss_pred CCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 609 LPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
+.... +...+.+||+.. ...++.++|||||||++|||+||+.||...........+. ........
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~-- 222 (256)
T cd08529 149 KLLSDNTNFANTIVGTPYYLSPELCE-DKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKII---RGVFPPVS-- 222 (256)
T ss_pred eeccCccchhhccccCccccCHHHhc-CCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---cCCCCCCc--
Confidence 54322 223344556544 4456789999999999999999999998655332222211 11100111
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
......+.+++.+||+.+|++||++.|+++.
T Consensus 223 ----------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 223 ----------QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ----------cccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1123456799999999999999999999874
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=306.99 Aligned_cols=246 Identities=22% Similarity=0.299 Sum_probs=189.4
Q ss_pred cCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
.+|+..++||+|+||.||+|... ++..+|+|.++.......+.+.+|++++++++|+||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------- 77 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCT------- 77 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEe-------
Confidence 45677899999999999999632 35689999887655555678999999999999999999999875
Q ss_pred CCCCceEEEEecccCcchhhhcccccC------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCce
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKK------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 592 (740)
.+...++||||+++|+|.++++.... ...+++..++.++.|++.|++|||+ .+|+||||||+||
T Consensus 78 -~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~ni 153 (280)
T cd05092 78 -EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNC 153 (280)
T ss_pred -cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhE
Confidence 33458999999999999999864321 1358899999999999999999998 7999999999999
Q ss_pred eecCCCceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccch
Q 004637 593 LLDKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDG 660 (740)
Q Consensus 593 Lld~~~~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~ 660 (740)
++++++.+||+|||++...... ...+.+||... ...++.++|||||||++|||++ |+.||.......
T Consensus 154 l~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 232 (280)
T cd05092 154 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL-YRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE 232 (280)
T ss_pred EEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhc-cCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH
Confidence 9999999999999998532111 12344555543 3457889999999999999999 899986544333
Q ss_pred hHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 661 LKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
....+... .+.... ......+.+++.+||+.||++||++.||.+.|++
T Consensus 233 ~~~~~~~~---~~~~~~------------~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 233 AIECITQG---RELERP------------RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHHHcC---ccCCCC------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 22222111 100001 1122446699999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=303.23 Aligned_cols=242 Identities=21% Similarity=0.352 Sum_probs=184.4
Q ss_pred CeeecCCCccEEEEEecC-CC--EEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFLTD-GS--RVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~-g~--~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||.||+|+..+ +. .+|+|.++... ....+.+.+|+++++++ +||||++++++|. ..+..+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--------~~~~~~ 72 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE--------HRGYLY 72 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe--------cCCCce
Confidence 468999999999999643 43 46888887432 33346788999999999 7999999999885 234579
Q ss_pred EEEecccCcchhhhccccc-------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC
Q 004637 532 LVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~ 598 (740)
+||||+++|+|.++++... ....+++.++..++.|++.||+|||+ .+++||||||+||++++++
T Consensus 73 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~ 149 (270)
T cd05047 73 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENY 149 (270)
T ss_pred EEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCC
Confidence 9999999999999986432 12347899999999999999999998 7999999999999999999
Q ss_pred ceeEecCCCCCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhh
Q 004637 599 TAKLSGYNIPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCL 669 (740)
Q Consensus 599 ~~kl~DFGla~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~ 669 (740)
.+|++|||++..... ....+.+||+.. ...++.++|||||||++|||+| |..||...+.......+..
T Consensus 150 ~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~-~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-- 226 (270)
T cd05047 150 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-- 226 (270)
T ss_pred eEEECCCCCccccchhhhccCCCCccccCChHHHc-cCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC--
Confidence 999999999842211 111244555543 4567889999999999999997 9999976543332222211
Q ss_pred hcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhh
Q 004637 670 AEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSI 725 (740)
Q Consensus 670 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (740)
... . ..+......+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus 227 -~~~--~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 227 -GYR--L----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -CCC--C----------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 000 0 001112345679999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=306.22 Aligned_cols=243 Identities=18% Similarity=0.219 Sum_probs=186.7
Q ss_pred CCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
|+..+.||+|+||+||+|+. .+++.||+|.+.... ......+.+|++++++++|+||+++.+++. .++
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~--------~~~ 73 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYE--------TKD 73 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe--------cCC
Confidence 56678999999999999985 568999999987542 222345788999999999999999988774 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 74 ALCLVLTIMNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred EEEEEEEeccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 689999999999999888642 23468999999999999999999998 79999999999999999999999999988
Q ss_pred CCCC--------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 609 LPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 609 ~~~~--------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
.... .++..+.+||... ...++.++|||||||++|||+||+.||...........+............
T Consensus 150 ~~~~~~~~~~~~~g~~~~~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~--- 225 (285)
T cd05632 150 VKIPEGESIRGRVGTVGYMAPEVLN-NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYS--- 225 (285)
T ss_pred eecCCCCcccCCCCCcCccChHHhc-CCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccC---
Confidence 4321 2334455666654 456788999999999999999999999865433222222222211111111
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS-----IEDVLWN 720 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 720 (740)
......+.+++.+|++.||++||+ +.|++..
T Consensus 226 ---------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 226 ---------AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ---------ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 111234568999999999999999 6666654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=309.32 Aligned_cols=248 Identities=19% Similarity=0.324 Sum_probs=189.7
Q ss_pred hcCCCCCCeeecCCCccEEEEEe------cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceeeeecc
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~ 521 (740)
.++|.+.+.||+|+||.||+|.. .++..||||+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~---- 109 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT---- 109 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe----
Confidence 35688899999999999999973 134579999987543 22345789999999999 7999999999875
Q ss_pred CCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCcee
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (740)
Q Consensus 522 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~k 601 (740)
..+..++||||+++|+|.++++.. ....+++.++..++.|++.||+|||+ .+|+|+||||+||+++.++.+|
T Consensus 110 ----~~~~~~lv~e~~~~~~L~~~i~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~ 181 (302)
T cd05055 110 ----IGGPILVITEYCCYGDLLNFLRRK-RESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVK 181 (302)
T ss_pred ----cCCceEEEEEcCCCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEE
Confidence 234589999999999999999642 22348999999999999999999998 7999999999999999999999
Q ss_pred EecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhh
Q 004637 602 LSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCL 669 (740)
Q Consensus 602 l~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~ 669 (740)
++|||+++..... ...+.+||... ...++.++|||||||++|||+| |+.||..............
T Consensus 182 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~-- 258 (302)
T cd05055 182 ICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK-- 258 (302)
T ss_pred ECCCcccccccCCCceeecCCCCcccccCCHhhhc-cCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH--
Confidence 9999998643211 12244555443 3456889999999999999998 9999876543322111111
Q ss_pred hcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 670 AEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 670 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
....... +.....++.+++.+|+..+|++||++.|+++.|+.+
T Consensus 259 ~~~~~~~------------~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 259 EGYRMAQ------------PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred cCCcCCC------------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0000000 011124577999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=308.97 Aligned_cols=245 Identities=20% Similarity=0.280 Sum_probs=188.1
Q ss_pred CCCCCCeeecCCCccEEEEEec------CCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
+|.+.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|+.++++++||||+++++++.
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~------- 78 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT------- 78 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------
Confidence 3556788999999999999853 257899999975432 22356889999999999999999999885
Q ss_pred CCCCceEEEEecccCcchhhhcccc-------------cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCc
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDW-------------KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTEN 591 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N 591 (740)
.....++++||+++++|.+++... .....+++..+..++.|++.||+|||+ .+|+||||||+|
T Consensus 79 -~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~N 154 (283)
T cd05091 79 -KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRN 154 (283)
T ss_pred -CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhh
Confidence 334589999999999999998421 112358889999999999999999998 799999999999
Q ss_pred eeecCCCceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccc
Q 004637 592 ILLDKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVD 659 (740)
Q Consensus 592 ILld~~~~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~ 659 (740)
|++++++.+||+|||+++..... ...+.+||... ...++.++|||||||++|||+| |..||.+....
T Consensus 155 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 233 (283)
T cd05091 155 VLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 233 (283)
T ss_pred eEecCCCceEecccccccccccchheeeccCccCCccccCHHHHh-cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 99999999999999987543211 12355566543 3457889999999999999998 88888765443
Q ss_pred hhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 660 GLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
+....+... ... ..+.++...+.+++.+||+.+|++||+++||++.|+.
T Consensus 234 ~~~~~i~~~---~~~------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 234 DVIEMIRNR---QVL------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHcC---CcC------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 333322211 100 0112233456799999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-35 Score=308.65 Aligned_cols=241 Identities=20% Similarity=0.357 Sum_probs=189.5
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.+|++.+.||+|+||.||+|+. .+++.||+|.+........+.+.+|+.+++.++||||+++++++. .+..
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~--------~~~~ 91 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL--------VGDE 91 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEE--------eCCE
Confidence 5788889999999999999984 568999999998665555677899999999999999999999875 2356
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++|+|.+++.+ ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.
T Consensus 92 ~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~ 164 (296)
T cd06654 92 LWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (296)
T ss_pred EEEeecccCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccch
Confidence 8999999999999999843 357899999999999999999998 799999999999999999999999999875
Q ss_pred CCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 610 PSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 610 ~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
... .+...+.+||... ...++.++|||||||++|||++|+.||............. ....+ ...
T Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~--~~~~~----~~~ 237 (296)
T cd06654 165 QITPEQSKRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA--TNGTP----ELQ 237 (296)
T ss_pred hccccccccCcccCCccccCHHHHc-CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHh--cCCCC----CCC
Confidence 321 2223355566544 4556789999999999999999999997654322111111 00000 000
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.+......+.+++.+||..||++||++.|+++.
T Consensus 238 -------~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 238 -------NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred -------CccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 011122456789999999999999999999974
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-35 Score=300.75 Aligned_cols=234 Identities=23% Similarity=0.361 Sum_probs=180.9
Q ss_pred CeeecCCCccEEEEEecCCC-----------EEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 457 NLIGEGSQGQLYKGFLTDGS-----------RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~g~-----------~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
+.||+|+||.||+|...+.. .|++|.+...... ...+.+|+.++++++||||+++++++..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-------
Confidence 46899999999999965432 5788877654433 6789999999999999999999998852
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC-------
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL------- 598 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~------- 598 (740)
...++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 73 --~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~ 145 (259)
T cd05037 73 --DENIMVEEYVKFGPLDVFLHRE--KNNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVP 145 (259)
T ss_pred --CCcEEEEEcCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCce
Confidence 2369999999999999999642 2268999999999999999999998 7999999999999999888
Q ss_pred ceeEecCCCCCCCC-----CCCCCccccccccCC-CCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhc
Q 004637 599 TAKLSGYNIPLPSK-----KGLESPLRGQYVSNQ-PGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAE 671 (740)
Q Consensus 599 ~~kl~DFGla~~~~-----~~~~~~~~~~~~~~~-~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 671 (740)
.+||+|||++.... .+...+.+||+.... ..++.++|||||||++|||++ |..|+............. ..
T Consensus 146 ~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~---~~ 222 (259)
T cd05037 146 FIKLSDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ---DQ 222 (259)
T ss_pred eEEeCCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh---cC
Confidence 79999999986532 233445667765543 467889999999999999999 577776543222111111 00
Q ss_pred CCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 672 ~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
. ... .+ ....+.+++.+||..+|++|||+.|+++.|.
T Consensus 223 ~--~~~---~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 223 H--RLP---MP---------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred C--CCC---CC---------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 000 00 0146779999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-35 Score=299.37 Aligned_cols=237 Identities=20% Similarity=0.366 Sum_probs=185.7
Q ss_pred CeeecCCCccEEEEEecCCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEEe
Q 004637 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLE 535 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~E 535 (740)
++||+|+||.||+|...+++.||+|.++.... .....+.+|++++++++||||++++++|. ..+..++|||
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~~lv~e 72 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT--------QRQPIYIVME 72 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe--------cCCccEEEEE
Confidence 46899999999999988899999999875432 22346889999999999999999999885 2345899999
Q ss_pred cccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCCC-
Q 004637 536 HISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKG- 614 (740)
Q Consensus 536 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~- 614 (740)
|+++|+|.+++.. ....+++..+..++.|++.||.|+|+ .+++||||||+||+++.++.+||+|||++.....+
T Consensus 73 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 147 (250)
T cd05085 73 LVPGGDFLSFLRK--KKDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI 147 (250)
T ss_pred CCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccc
Confidence 9999999999864 23458899999999999999999998 79999999999999999999999999998543221
Q ss_pred ---------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccccCccc
Q 004637 615 ---------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSV 684 (740)
Q Consensus 615 ---------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 684 (740)
...+.+||+.. ...++.++|||||||++||+++ |..||...........+.. ... .
T Consensus 148 ~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~---~~~----~------ 213 (250)
T cd05085 148 YSSSGLKQIPIKWTAPEALN-YGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEK---GYR----M------ 213 (250)
T ss_pred cccCCCCCCcccccCHHHhc-cCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHc---CCC----C------
Confidence 11245555543 4557889999999999999998 9999976543332222211 110 0
Q ss_pred cCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 685 RGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 685 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
..+......+.+++.+|+..+|++||++.|+++.|.
T Consensus 214 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 214 --SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred --CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 011122356779999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=305.66 Aligned_cols=246 Identities=17% Similarity=0.294 Sum_probs=191.2
Q ss_pred hcCCCCCCeeecCCCccEEEEEecC------CCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTD------GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~ 522 (740)
.++|++.+.||+|+||.||+|...+ +..||+|.+.... ......+.+|+++++.++||||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----- 79 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS----- 79 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc-----
Confidence 3578889999999999999998542 4689999986443 233457889999999999999999999875
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccC-------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeec
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKK-------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld 595 (740)
.+...++||||+++|+|.+++..... ...++|..+..++.|++.||+|||+ .+|+||||||+||+++
T Consensus 80 ---~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~ 153 (277)
T cd05032 80 ---TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVA 153 (277)
T ss_pred ---CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEc
Confidence 33568999999999999999864221 2347889999999999999999998 7999999999999999
Q ss_pred CCCceeEecCCCCCCCCC-----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHH
Q 004637 596 KALTAKLSGYNIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKL 663 (740)
Q Consensus 596 ~~~~~kl~DFGla~~~~~-----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~ 663 (740)
+++.+||+|||+++.... ++..+.+||... ...++.++|||||||++||++| |+.||..........
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 232 (277)
T cd05032 154 EDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK-DGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK 232 (277)
T ss_pred CCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHh-cCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH
Confidence 999999999999753211 112345566543 4457889999999999999998 999997655444333
Q ss_pred HHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 664 QLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
.+.. ...... +......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 233 ~~~~---~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 233 FVID---GGHLDL------------PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHhc---CCCCCC------------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 3321 110001 1112356779999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=308.12 Aligned_cols=250 Identities=15% Similarity=0.274 Sum_probs=190.4
Q ss_pred HhcCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeecc
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~ 521 (740)
..++|++.+.||+|+||.||+|... .+..||+|.++.... .....+.+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~---- 79 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS---- 79 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence 4578999999999999999999743 245899998864432 22346788999999999999999999874
Q ss_pred CCCCCCCceEEEEecccCcchhhhcccccC-------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceee
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594 (740)
Q Consensus 522 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 594 (740)
.+...++||||+++|+|.++++.... ....++..+..++.|++.||+|||+ ++|+||||||+||++
T Consensus 80 ----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili 152 (288)
T cd05061 80 ----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMV 152 (288)
T ss_pred ----CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEE
Confidence 23458999999999999999964221 2345778889999999999999998 799999999999999
Q ss_pred cCCCceeEecCCCCCCCCC------C-----CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhH
Q 004637 595 DKALTAKLSGYNIPLPSKK------G-----LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLK 662 (740)
Q Consensus 595 d~~~~~kl~DFGla~~~~~------~-----~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~ 662 (740)
++++.+|++|||+++.... + ...+.+||... ...++.++|||||||++|||++ |+.||......+..
T Consensus 153 ~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~-~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~ 231 (288)
T cd05061 153 AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK-DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 231 (288)
T ss_pred cCCCcEEECcCCccccccccccccccCCCcccccccCHHHhc-cCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999999999999853211 1 12244555543 4457889999999999999999 78888765443332
Q ss_pred HHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhh
Q 004637 663 LQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSI 725 (740)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (740)
..+... ..+ .. +......+.+++.+|++.||++|||+.|+++.|+...
T Consensus 232 ~~~~~~--~~~-~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 232 KFVMDG--GYL-DQ------------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHcC--CCC-CC------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 222110 000 00 1112346779999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=317.14 Aligned_cols=256 Identities=21% Similarity=0.268 Sum_probs=196.6
Q ss_pred CCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhcc-C-----cccceeeceeeeeccCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-H-----RHLVSILGHCILTYQDHP 524 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~-H-----~nIv~l~g~~~~~~~~~~ 524 (740)
+|++.+.||+|+||.|.||. ..+++.||||+++.... ...+...|+.+|..++ | -|+|++++|+.
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~------- 258 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFY------- 258 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccc-------
Confidence 78999999999999999999 56699999999985432 3355678999999997 4 48999999886
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC--CceeE
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA--LTAKL 602 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~--~~~kl 602 (740)
..++.|||+|.++. +|+++++..+ ...++...++.++.||+.||.+||+ .+|||+||||+||||.+. ..+||
T Consensus 259 -fr~HlciVfELL~~-NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKV 332 (586)
T KOG0667|consen 259 -FRNHLCIVFELLST-NLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKV 332 (586)
T ss_pred -cccceeeeehhhhh-hHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeE
Confidence 34679999999976 9999998643 4458999999999999999999998 799999999999999754 47999
Q ss_pred ecCCCCCCCCCCC------CCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 603 SGYNIPLPSKKGL------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 603 ~DFGla~~~~~~~------~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
+|||.|....... ..|.+||.+. +..|+.+.||||||||+.||+||.+.|.+.+..+....+.......|..+
T Consensus 333 IDFGSSc~~~q~vytYiQSRfYRAPEVIL-GlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~m 411 (586)
T KOG0667|consen 333 IDFGSSCFESQRVYTYIQSRFYRAPEVIL-GLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKM 411 (586)
T ss_pred EecccccccCCcceeeeeccccccchhhc-cCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9999997654432 3355677766 56788999999999999999999999998776555444443333222111
Q ss_pred ccc-------cCc--------------------------------cccC--------CCcHHHHHHHHHHHHhccccCCC
Q 004637 677 RAE-------ADP--------------------------------SVRG--------TYAYDSLRTTVEITINCLSKDAA 709 (740)
Q Consensus 677 ~~~-------~~~--------------------------------~l~~--------~~~~~~~~~~~~li~~cl~~dP~ 709 (740)
.+. ++. .... ......-..+++++.+|+++||.
T Consensus 412 L~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~ 491 (586)
T KOG0667|consen 412 LDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPA 491 (586)
T ss_pred HHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCch
Confidence 000 000 0000 00112345679999999999999
Q ss_pred CCCCHHHHHHHhh
Q 004637 710 KRPSIEDVLWNLQ 722 (740)
Q Consensus 710 ~RPs~~evl~~L~ 722 (740)
+|+|..|++++--
T Consensus 492 ~R~tp~qal~Hpf 504 (586)
T KOG0667|consen 492 ERITPAQALNHPF 504 (586)
T ss_pred hcCCHHHHhcCcc
Confidence 9999999998643
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-35 Score=301.20 Aligned_cols=241 Identities=23% Similarity=0.337 Sum_probs=187.0
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc-----cChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-----~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
++|++.+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++.
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~------- 74 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLR------- 74 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEc-------
Confidence 5688999999999999999985 4689999999874421 12356889999999999999999999885
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
.++..++||||+++++|.+++.. ...+++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+|
T Consensus 75 -~~~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 75 -DDETLSIFMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred -cCCeEEEEEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEee
Confidence 33479999999999999999853 3468889999999999999999998 7999999999999999999999999
Q ss_pred CCCCCCCCC------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC
Q 004637 605 YNIPLPSKK------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 605 FGla~~~~~------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
||+++.... +...+.+||... ...++.++|||||||++|||++|+.||...+........ .....
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~--~~~~~ 224 (263)
T cd06625 148 FGASKRLQTICSSGTGMKSVTGTPYWMSPEVIS-GEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKI--ATQPT 224 (263)
T ss_pred cccceeccccccccccccCCCcCccccCcceec-cCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHH--hccCC
Confidence 999853211 122344555544 345788999999999999999999999754332211111 11111
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
..... ......+.+++.+||..+|++|||+.|+++.
T Consensus 225 ~~~~~------------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 225 NPQLP------------SHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCCCC------------ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 11111 1122456689999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=303.87 Aligned_cols=244 Identities=18% Similarity=0.331 Sum_probs=189.8
Q ss_pred CCCCCCeeecCCCccEEEEEec-CC---CEEEEEEeecc-cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DG---SRVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g---~~vAvK~l~~~-~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
+|++.+.||+|+||.||+|+.. ++ ..||||.++.. .....++|..|++++++++||||+++++++. .
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~--------~ 76 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT--------K 76 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEEC--------C
Confidence 4677899999999999999854 33 36999998754 2333468999999999999999999998874 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
+...++||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+ .+++||||||+||+++.++.+|++|||
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg 151 (269)
T cd05065 77 SRPVMIITEFMENGALDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFG 151 (269)
T ss_pred CCceEEEEecCCCCcHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCc
Confidence 4568999999999999999864 23468999999999999999999998 799999999999999999999999999
Q ss_pred CCCCCCCCC--------------CCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhc
Q 004637 607 IPLPSKKGL--------------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAE 671 (740)
Q Consensus 607 la~~~~~~~--------------~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 671 (740)
.+....... ..+.+||+.. ...++.++|||||||++|||++ |..||...........+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~--- 227 (269)
T cd05065 152 LSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD--- 227 (269)
T ss_pred cccccccCccccccccccCCCcceeecCHhHhc-cCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC---
Confidence 875432111 1234455443 4567889999999999999887 99999765544333332211
Q ss_pred CCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 672 ~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
.. . ..+.+++..+.+++.+||+.+|++||++.+|+..|+.+
T Consensus 228 ~~--~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 YR--L----------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred Cc--C----------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0 00112234567899999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=305.74 Aligned_cols=253 Identities=18% Similarity=0.297 Sum_probs=190.2
Q ss_pred hcCCCCCCeeecCCCccEEEEEecC-----------------CCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccce
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTD-----------------GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVS 511 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~~-----------------g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~ 511 (740)
.++|++.+.||+|+||.||+|+..+ +..||+|.+.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578899999999999999988542 2468999987543 233567899999999999999999
Q ss_pred eeceeeeeccCCCCCCCceEEEEecccCcchhhhccccc--------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCce
Q 004637 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK--------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIF 583 (740)
Q Consensus 512 l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ii 583 (740)
++++|. .++..++||||+++++|.+++.... ....+++..+..++.|++.||+|||+ .+|+
T Consensus 84 ~~~~~~--------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~ 152 (296)
T cd05051 84 LLGVCT--------VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFV 152 (296)
T ss_pred EEEEEe--------cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCcc
Confidence 999885 2356899999999999999986432 12268999999999999999999998 7999
Q ss_pred ecCCCCCceeecCCCceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh--CC
Q 004637 584 GNNLKTENILLDKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT--GK 650 (740)
Q Consensus 584 HrDlKp~NILld~~~~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt--G~ 650 (740)
||||||+||+++.++.+||+|||++...... ...+.+||... ...++.++|||||||++|||++ |.
T Consensus 153 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~~~~~~ 231 (296)
T cd05051 153 HRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVL-LGKFTTKSDVWAFGVTLWEILTLCRE 231 (296)
T ss_pred ccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhh-cCCCCccchhhhhHHHHHHHHhcCCC
Confidence 9999999999999999999999998542211 12345555544 3457899999999999999998 67
Q ss_pred CCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 651 QVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 651 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
.||.................... ..... ..+.....++.+++.+||+.||++|||+.||++.|+
T Consensus 232 ~p~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 232 QPYEHLTDQQVIENAGHFFRDDG--RQIYL------PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCCCCcChHHHHHHHHhcccccc--ccccC------CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 77765443332222221111000 00000 011122356789999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=307.75 Aligned_cols=260 Identities=18% Similarity=0.291 Sum_probs=187.7
Q ss_pred CCCCCCeeecCCCccEEEEEe-----cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
.|++.+.||+|+||.||+++. .++..||+|.++... ....+.+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED------ 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC------
Confidence 467889999999999999974 357889999987543 33346789999999999999999999987521
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.+...++||||+++++|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 79 ~~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~df 153 (284)
T cd05079 79 GGNGIKLIMEFLPSGSLKEYLPR--NKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDF 153 (284)
T ss_pred CCCceEEEEEccCCCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCC
Confidence 23458999999999999999853 23458999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCCC------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCC
Q 004637 606 NIPLPSKK------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673 (740)
Q Consensus 606 Gla~~~~~------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 673 (740)
|+++.... +...+.+||... ...++.++|||||||++|||+|++.|....... ..........+..
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~-~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (284)
T cd05079 154 GLTKAIETDKEYYTVKDDLDSPVFWYAPECLI-QSKFYIASDVWSFGVTLYELLTYCDSESSPMTL-FLKMIGPTHGQMT 231 (284)
T ss_pred ccccccccCccceeecCCCCCCccccCHHHhc-cCCCCccccchhhhhhhhhhhcCCCCCccccch-hhhhccccccccc
Confidence 99854321 112244555443 345788999999999999999988765321100 0000000000000
Q ss_pred -cccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 674 -SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 674 -~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
...............+......+.+++.+||+.||++||++.|+++.++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 232 VTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 000000000000011112345678999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=301.80 Aligned_cols=241 Identities=17% Similarity=0.301 Sum_probs=181.6
Q ss_pred CeeecCCCccEEEEEec----CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.+++.++||||++++++|.. .++..+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~~~~~~ 73 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP-------SEGSPL 73 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeec-------CCCCcE
Confidence 46899999999999853 24579999885432 2334678899999999999999999997752 234478
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. .....++..+..++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+++..
T Consensus 74 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 74 VVLPYMKHGDLRNFIRS--ETHNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred EEEecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccc
Confidence 99999999999999964 23446788889999999999999998 79999999999999999999999999998532
Q ss_pred CC-------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhC-CCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 612 KK-------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITG-KQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 612 ~~-------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
.. +...+.+||+.. ...++.++|||||||++|||++| .+||...........+. ...+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~---~~~~~~~- 223 (262)
T cd05058 149 YDKEYYSVHNHTGAKLPVKWMALESLQ-TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLL---QGRRLLQ- 223 (262)
T ss_pred cCCcceeecccccCcCCccccChhHhc-cCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh---cCCCCCC-
Confidence 11 112345556543 35678899999999999999995 55665443322222211 1110000
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhh
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSI 725 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (740)
+...+..+.+++.+||+.+|++||++.|+++.|+.+.
T Consensus 224 -----------~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 224 -----------PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred -----------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 0111245679999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=305.96 Aligned_cols=256 Identities=18% Similarity=0.249 Sum_probs=191.1
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++. .+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------~~ 72 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR--------RK 72 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe--------eC
Confidence 46888999999999999999965 58999999987543 223456889999999999999999999875 34
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
...++||||++++.|..++. ....+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 73 ~~~~~v~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 73 RKLHLVFEYCDHTVLNELEK---NPRGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred CEEEEEEeccCccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECcccc
Confidence 56899999999988888764 33458999999999999999999999 7999999999999999999999999999
Q ss_pred CCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc-
Q 004637 608 PLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR- 677 (740)
Q Consensus 608 a~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 677 (740)
+..... +...+.+||.......++.++|||||||++|||+||+.||.+....+....+............
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07847 147 ARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQ 226 (286)
T ss_pred ceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 854322 1233456666554456788999999999999999999999865433322222221111100000
Q ss_pred ---------cccCccccCCCc-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 678 ---------AEADPSVRGTYA-----YDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 ---------~~~~~~l~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
....+......+ ......+.+++.+||+.||++||++.|++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 227 IFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred hcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 000000000000 1123567799999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=318.32 Aligned_cols=262 Identities=18% Similarity=0.226 Sum_probs=189.3
Q ss_pred HhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecc--cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
..++|++.+.||+|+||.||+|+. .+|+.||||++... .......+.+|+.+++.++||||+++++++... +...
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQ--KSLE 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccC--CCcc
Confidence 457899999999999999999985 46899999999743 223346788999999999999999999987522 1112
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.....|+||||+++ +|.+.++ ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecC
Confidence 33458999999975 6766663 237888899999999999999999 79999999999999999999999999
Q ss_pred CCCCCCC--------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhc------
Q 004637 606 NIPLPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE------ 671 (740)
Q Consensus 606 Gla~~~~--------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~------ 671 (740)
|+++... .++..+.+||... ...++.++|||||||++|||+||+.||...+.......+......
T Consensus 168 g~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
T cd07876 168 GLARTACTNFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 246 (359)
T ss_pred CCccccccCccCCCCcccCCCCCchhcc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHH
Confidence 9985432 2233456666654 456788999999999999999999999865432211111110000
Q ss_pred -------------CCc----ccccccCcccc---CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 672 -------------APS----KLRAEADPSVR---GTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 672 -------------~~~----~~~~~~~~~l~---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
.+. ...+....... ..........+.+++.+||+.||++|||+.|++++-.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 317 (359)
T cd07876 247 NRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317 (359)
T ss_pred HHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 000 00000000000 0001112345679999999999999999999998653
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=305.29 Aligned_cols=236 Identities=21% Similarity=0.366 Sum_probs=180.1
Q ss_pred CeeecCCCccEEEEEecC--------CCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 457 NLIGEGSQGQLYKGFLTD--------GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.+++.++||||+++++++.. ++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~--------~~ 72 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC--------GD 72 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe--------CC
Confidence 468999999999998532 23488888875544455678999999999999999999998862 34
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCc--------e
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT--------A 600 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~--------~ 600 (740)
..++||||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++. +
T Consensus 73 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~ 147 (258)
T cd05078 73 ESIMVQEYVKFGSLDTYLKK--NKNLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFI 147 (258)
T ss_pred CcEEEEecCCCCcHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceE
Confidence 57999999999999999964 23368999999999999999999998 79999999999999987765 6
Q ss_pred eEecCCCCCCCC-----CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCC-CCCCCCccchhHHHHHHhhhcCCc
Q 004637 601 KLSGYNIPLPSK-----KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGK-QVKSTSEVDGLKLQLETCLAEAPS 674 (740)
Q Consensus 601 kl~DFGla~~~~-----~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~-~p~~~~~~~~~~~~~~~~~~~~~~ 674 (740)
|++|||.+.... .+...+.+||.......++.++|||||||++|||++|. .|+...+........ . .. .
T Consensus 148 ~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~-~---~~-~ 222 (258)
T cd05078 148 KLSDPGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY-E---DR-H 222 (258)
T ss_pred EecccccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH-H---cc-c
Confidence 999999875332 23344667776654456788999999999999999995 555533322111111 0 00 0
Q ss_pred ccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 675 KLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 675 ~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
... .....++.+++.+||+.||++|||++|+++.|.
T Consensus 223 ~~~------------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 223 QLP------------APKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred cCC------------CCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 011 111235679999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=300.20 Aligned_cols=237 Identities=19% Similarity=0.310 Sum_probs=185.5
Q ss_pred CeeecCCCccEEEEEecC----CCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
++||+|+||.||+|++.. +..||+|.++.... ...+++.+|++++++++||||+++++++. ....+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~---------~~~~~ 71 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK---------GEPLM 71 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc---------CCceE
Confidence 469999999999998432 26899999875543 23467899999999999999999999763 23479
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||. .+++||||||+||+++.++.+||+|||+++..
T Consensus 72 ~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 72 LVMELAPLGPLLKYLKK---RREIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred EEEEeCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEecccccccee
Confidence 99999999999999964 3368999999999999999999998 79999999999999999999999999998543
Q ss_pred CCCC------------CCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 612 KKGL------------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 612 ~~~~------------~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
.... ..+.+||... ...++.++|||||||++|||++ |+.||...+.......+.... +..
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~---~~~--- 218 (257)
T cd05060 146 GAGSDYYRATTAGRWPLKWYAPECIN-YGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE---RLP--- 218 (257)
T ss_pred ecCCcccccccCccccccccCHHHhc-CCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC---cCC---
Confidence 2111 1244555443 4557889999999999999998 999997655433333332111 000
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
.+......+.+++.+||..+|++||++.++++.|+..
T Consensus 219 ---------~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 219 ---------RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred ---------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 1111234677999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=317.87 Aligned_cols=262 Identities=17% Similarity=0.223 Sum_probs=190.4
Q ss_pred HHhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 448 ~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
...++|++.+.||+|+||.||+|+. ..++.||||++.... ....+.+.+|+.+++.++||||+++++++... +..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 91 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ--KSL 91 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecc--ccc
Confidence 3557899999999999999999984 468899999987532 22345778899999999999999999987532 111
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
......++||||+++ ++.+.+. ..+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 92 ~~~~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~D 162 (355)
T cd07874 92 EEFQDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILD 162 (355)
T ss_pred cccceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEee
Confidence 234568999999975 7777663 247888999999999999999999 7999999999999999999999999
Q ss_pred CCCCCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhc-CC--
Q 004637 605 YNIPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE-AP-- 673 (740)
Q Consensus 605 FGla~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~-~~-- 673 (740)
||+++.... ++..+.+||... ...++.++|||||||++|||++|+.||.+.+.......+...... .+
T Consensus 163 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (355)
T cd07874 163 FGLARTAGTSFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241 (355)
T ss_pred CcccccCCCccccCCccccCCccCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999864322 334455666654 456788999999999999999999999865432221111110000 00
Q ss_pred ---------------cccccccCcc-----cc---CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 674 ---------------SKLRAEADPS-----VR---GTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 674 ---------------~~~~~~~~~~-----l~---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
........+. .. ..........+.+++.+|++.||++|||+.|++++-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp 312 (355)
T cd07874 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP 312 (355)
T ss_pred HHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence 0000000000 00 001111234677999999999999999999999863
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-35 Score=299.78 Aligned_cols=238 Identities=18% Similarity=0.282 Sum_probs=185.5
Q ss_pred CeeecCCCccEEEEEecC--C--CEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFLTD--G--SRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~--g--~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||.||+|.+.+ + ..||||.+..... ...+.+.+|++++++++||||+++++++.. ...+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------~~~~ 71 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT---------HPLM 71 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC---------CeEE
Confidence 468999999999998543 3 3699999986654 455789999999999999999999998752 4589
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++..... ..+++.....++.|+++||+|||+ .+++||||||+||+++.++.+||+|||+++..
T Consensus 72 ~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~ 147 (257)
T cd05040 72 MVTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRAL 147 (257)
T ss_pred EEEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccc
Confidence 99999999999999975332 568999999999999999999998 79999999999999999999999999998543
Q ss_pred CC------------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 612 KK------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 612 ~~------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
.. +...+.+||+.. ...++.++|||||||++|||+| |+.||......+....+...... ..
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~~pE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----~~- 221 (257)
T cd05040 148 PQNEDHYVMEEHLKVPFAWCAPESLR-TRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGER----LE- 221 (257)
T ss_pred cccccceecccCCCCCceecCHHHhc-ccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCc----CC-
Confidence 22 112234444432 4457889999999999999999 99999755443333322211000 00
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
.+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 222 ---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 ---------RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ---------CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 01112345779999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=330.72 Aligned_cols=263 Identities=18% Similarity=0.231 Sum_probs=190.7
Q ss_pred HHHHHHhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCc------ccceeecee
Q 004637 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHR------HLVSILGHC 516 (740)
Q Consensus 444 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~------nIv~l~g~~ 516 (740)
+++...+++|++.+.||+|+||+||+|+. .+++.||||+++... ....++..|++++++++|. +++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 34445678899999999999999999985 458899999997432 2234567788888887655 478888776
Q ss_pred eeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC
Q 004637 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596 (740)
Q Consensus 517 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~ 596 (740)
.. ...+.|+|||++ +++|.+++.. ...+++..+..|+.||+.||+|||+. .+||||||||+|||++.
T Consensus 201 ~~-------~~~~~~iv~~~~-g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~ 267 (467)
T PTZ00284 201 QN-------ETGHMCIVMPKY-GPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMET 267 (467)
T ss_pred Ec-------CCceEEEEEecc-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEec
Confidence 41 335689999998 6789988853 45689999999999999999999972 49999999999999987
Q ss_pred CC----------------ceeEecCCCCCCC------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCC
Q 004637 597 AL----------------TAKLSGYNIPLPS------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKS 654 (740)
Q Consensus 597 ~~----------------~~kl~DFGla~~~------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~ 654 (740)
++ .+||+|||.+... ..++..|.+||.+. ...++.++|||||||++|||+||+.||.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 268 SDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVL-GLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred CCcccccccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhh-cCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 65 4999999987432 23455677777765 4568899999999999999999999998
Q ss_pred CCccchhHHHHHHhhhcCCccccc-------------------ccCcc----ccCCC---cHHHHHHHHHHHHhccccCC
Q 004637 655 TSEVDGLKLQLETCLAEAPSKLRA-------------------EADPS----VRGTY---AYDSLRTTVEITINCLSKDA 708 (740)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~----l~~~~---~~~~~~~~~~li~~cl~~dP 708 (740)
..+..+....+.......+..+.. ..++. +.... .......+.+|+.+||+.||
T Consensus 347 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 347 THDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred CCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 765444333333322222111100 00000 00000 00112456799999999999
Q ss_pred CCCCCHHHHHHHh
Q 004637 709 AKRPSIEDVLWNL 721 (740)
Q Consensus 709 ~~RPs~~evl~~L 721 (740)
++|||++|++++-
T Consensus 427 ~~R~ta~e~L~Hp 439 (467)
T PTZ00284 427 QKRLNARQMTTHP 439 (467)
T ss_pred hhCCCHHHHhcCc
Confidence 9999999999753
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=319.44 Aligned_cols=242 Identities=18% Similarity=0.275 Sum_probs=185.2
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|+..+.||+|+||+||+|+. .+++.||+|+++... ......+.+|+.++.+++||||+++++++. .
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--------~ 72 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ--------D 72 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE--------c
Confidence 4688899999999999999985 468999999997532 233457888999999999999999998774 4
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
++..|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 73 KRNLYLIMEFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred CCEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeecc
Confidence 4668999999999999999853 4568999999999999999999998 799999999999999999999999999
Q ss_pred CCCCCC--------------------------------------------CCCCCccccccccCCCCCCCccceehhhHH
Q 004637 607 IPLPSK--------------------------------------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVI 642 (740)
Q Consensus 607 la~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvi 642 (740)
++.... .++..+.+||... ...++.++|||||||+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~~DiwSlGvi 225 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM-QTGYNKLCDWWSLGVI 225 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc-CCCCCCcceeccccce
Confidence 875321 1334456666554 4567889999999999
Q ss_pred HHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCC---HHHHHH
Q 004637 643 LLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS---IEDVLW 719 (740)
Q Consensus 643 l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs---~~evl~ 719 (740)
+|||+||+.||...........+...... . ...+.. ....++.+++.+++. ||++|++ +.|+++
T Consensus 226 lyel~tG~~Pf~~~~~~~~~~~i~~~~~~----~--~~p~~~------~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 226 MYEMLIGYPPFCSETPQETYRKVMNWKET----L--VFPPEV------PISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred eeecccCCCCCCCCCHHHHHHHHHcCCCc----e--ecCCCC------CCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 99999999999865544332222211000 0 011100 012345578877664 9999985 677776
Q ss_pred H
Q 004637 720 N 720 (740)
Q Consensus 720 ~ 720 (740)
+
T Consensus 293 h 293 (360)
T cd05627 293 H 293 (360)
T ss_pred C
Confidence 5
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=305.45 Aligned_cols=244 Identities=19% Similarity=0.214 Sum_probs=186.9
Q ss_pred CCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
|+..+.||+|+||.||+|.. .+++.||||.+..... ...+.+.+|+.++++++|+||+++++.+. .++
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~--------~~~ 73 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE--------TKD 73 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe--------cCC
Confidence 66778999999999999985 4689999999875432 22345778999999999999999998774 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++|+|.+++.. .....+++..+..++.|++.||.|||+ .+|+||||||+||++++++.++|+|||++
T Consensus 74 ~~~lv~e~~~g~~L~~~l~~-~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 74 ALCLVLTLMNGGDLKFHIYH-MGEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred EEEEEEEecCCCcHHHHHHH-hcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 68999999999999998854 223458999999999999999999998 79999999999999999999999999998
Q ss_pred CCCC--------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 609 LPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 609 ~~~~--------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
.... .++..+.+||... ...++.++|||||||++|||++|+.||...................+....
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--- 225 (285)
T cd05630 150 VHVPEGQTIKGRVGTVGYMAPEVVK-NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYS--- 225 (285)
T ss_pred eecCCCccccCCCCCccccChHHHc-CCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcC---
Confidence 5432 2334455666654 455788999999999999999999999864322111111111111110111
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHHh
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS-----IEDVLWNL 721 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~L 721 (740)
......+.+++.+||+.||++||| ++|++++-
T Consensus 226 ---------~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~ 262 (285)
T cd05630 226 ---------EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHP 262 (285)
T ss_pred ---------ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcCh
Confidence 111234569999999999999999 88988743
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=318.20 Aligned_cols=261 Identities=16% Similarity=0.218 Sum_probs=190.5
Q ss_pred HhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
..++|++.+.||+|+||.||+|+. ..++.||||++.... ....+.+.+|+.+++.++||||+++++++... +...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~--~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQ--KSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccc--cccc
Confidence 457899999999999999999984 468899999987532 23346788999999999999999999877422 1222
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.....|+||||+++ +|.+++. ..+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 100 ~~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Df 170 (364)
T cd07875 100 EFQDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 170 (364)
T ss_pred ccCeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeC
Confidence 34568999999975 7777773 247888999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCC--------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 606 NIPLPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 606 Gla~~~~--------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
|+++... .++..+.+||... ...++.++|||||||++|||++|+.||...+.......+............
T Consensus 171 G~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (364)
T cd07875 171 GLARTAGTSFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249 (364)
T ss_pred CCccccCCCCcccCCcccCCcCCHHHHh-CCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 9986432 2334455666654 456788999999999999999999999865433222221111110000000
Q ss_pred ccc----------------------Cccc----cCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 678 AEA----------------------DPSV----RGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 678 ~~~----------------------~~~l----~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
... .+.. ...........+.+++.+|++.||++|||+.|++++-
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp 319 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 000 0000 0000111234577999999999999999999999863
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=299.85 Aligned_cols=245 Identities=22% Similarity=0.358 Sum_probs=193.8
Q ss_pred hcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.++|++.+.||+|+||.||+|..++++.||||.+.... ...+++.+|++++++++|+||+++++++. ....
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~ 75 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCS--------EEEP 75 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeee--------cCCc
Confidence 46788999999999999999998888899999987543 23567999999999999999999998774 3345
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++++|.+++... ....+++..+..++.|++.|++|||+ .+|+|+||||+||++++++.+|++|||.+.
T Consensus 76 ~~~v~e~~~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~ 151 (261)
T cd05034 76 IYIVTEYMSKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLAR 151 (261)
T ss_pred eEEEEeccCCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccce
Confidence 89999999999999999652 23468999999999999999999998 699999999999999999999999999985
Q ss_pred CCCC----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 610 PSKK----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 610 ~~~~----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
.... ....+.+||... ...++.++|||||||++|||+| |+.||...........+... .....
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~---~~~~~-- 225 (261)
T cd05034 152 LIEDDEYTAREGAKFPIKWTAPEAAN-YGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG---YRMPR-- 225 (261)
T ss_pred eccchhhhhhhccCCCccccCHHHhc-cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC---CCCCC--
Confidence 4321 112344555543 4567889999999999999999 99999765443332222111 10000
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
+.+....+.+++.+|+..+|++||+++|+.+.|+.
T Consensus 226 ----------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 226 ----------PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 01113456799999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=306.47 Aligned_cols=261 Identities=21% Similarity=0.338 Sum_probs=196.7
Q ss_pred CCHHHHHHHhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhc-cCcccceeeceeee
Q 004637 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCIL 518 (740)
Q Consensus 441 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~ 518 (740)
+.++++..+.++|++.+.||+|+||.||+|+. .+++.+|+|+++... .....+.+|+.+++++ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 34456667889999999999999999999985 458899999876432 2346788999999999 69999999998753
Q ss_pred eccCCCCCCCceEEEEecccCcchhhhcccc-cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC
Q 004637 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (740)
Q Consensus 519 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~ 597 (740)
.. ...++..++||||+++|+|.+++... .....+++..+..++.|+++||.|||+ .+|+||||||+||+++++
T Consensus 87 ~~---~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~ 160 (286)
T cd06638 87 KD---VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTE 160 (286)
T ss_pred cc---cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCC
Confidence 21 13456789999999999999987542 233568899999999999999999998 799999999999999999
Q ss_pred CceeEecCCCCCCCC---------CCCCCccccccccC----CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHH
Q 004637 598 LTAKLSGYNIPLPSK---------KGLESPLRGQYVSN----QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQ 664 (740)
Q Consensus 598 ~~~kl~DFGla~~~~---------~~~~~~~~~~~~~~----~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~ 664 (740)
+.+||+|||+++... .+...+.+||+... ...++.++|||||||++|||++|+.||.........
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~-- 238 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL-- 238 (286)
T ss_pred CCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH--
Confidence 999999999975322 13334556665432 234678999999999999999999998754321111
Q ss_pred HHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 665 LETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.......+ ....++. .....+.+++.+||+.||++|||+.|+++..
T Consensus 239 -~~~~~~~~---~~~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 239 -FKIPRNPP---PTLHQPE-------LWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred -hhccccCC---CcccCCC-------CcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 11000000 0011111 1123567999999999999999999999764
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=311.72 Aligned_cols=232 Identities=19% Similarity=0.253 Sum_probs=181.1
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~~ 526 (740)
+|+..+.||+|+||+||+|+. .+|+.||+|+++... ....+.+..|.++++.+. |++|+++++++. .
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------~ 72 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ--------T 72 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEe--------c
Confidence 367789999999999999985 468999999997542 223456788999998886 567777877664 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
.+..|+||||+++|+|.+++. ....+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 73 ~~~~~lv~Ey~~~g~L~~~i~---~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 73 VDRLYFVMEYVNGGDLMYHIQ---QVGKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred CCEEEEEEcCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccc
Confidence 456899999999999999985 34568999999999999999999998 799999999999999999999999999
Q ss_pred CCCCCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 607 IPLPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 607 la~~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
+++... .++..+.+||... ...++.++|||||||++|||+||+.||...........+...... ..
T Consensus 147 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~----~p 221 (323)
T cd05615 147 MCKEHMVDGVTTRTFCGTPDYIAPEIIA-YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS----YP 221 (323)
T ss_pred cccccCCCCccccCccCCccccCHHHHc-CCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC----CC
Confidence 975321 1344566677654 456789999999999999999999999876544433333221111 11
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCH
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSI 714 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~ 714 (740)
. .....+.+++.+|++.||++|++.
T Consensus 222 ~------------~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 222 K------------SLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred c------------cCCHHHHHHHHHHcccCHhhCCCC
Confidence 1 112356689999999999999975
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-35 Score=310.66 Aligned_cols=237 Identities=20% Similarity=0.239 Sum_probs=180.1
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||+||+|+. .+++.||+|+++... ....+.+.+|+.++.++ +||||+++++++. ..+..|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~--------~~~~~~ 72 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQ--------TTSRLF 72 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEE--------eCCEEE
Confidence 4799999999999995 457899999998542 22345678899999888 6999999998774 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~~~---~~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 73 LVIEYVNGGDLMFHMQ---RQRKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred EEEeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 9999999999998884 34568999999999999999999999 79999999999999999999999999988532
Q ss_pred ---------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccc---hhHHHHHHhhhcCCcccccc
Q 004637 612 ---------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVD---GLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 612 ---------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 679 (740)
..++..+.+||... ...++.++|||||||++|||+||+.||...... .....+.......+......
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 225 (327)
T cd05617 147 LGPGDTTSTFCGTPNYIAPEILR-GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRF 225 (327)
T ss_pred cCCCCceecccCCcccCCHHHHC-CCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCC
Confidence 11344456666654 456789999999999999999999999642211 11112222211111111111
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCH------HHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSI------EDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~------~evl~~ 720 (740)
+ ...+.+++.+||+.||++|+++ .++.+.
T Consensus 226 ~------------~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 226 L------------SVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred C------------CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 1 2345689999999999999984 566543
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=304.82 Aligned_cols=243 Identities=19% Similarity=0.295 Sum_probs=187.4
Q ss_pred CCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 453 FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
|++.+.||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++||||+++++++. .++..+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~--------~~~~~~ 78 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY--------YENNLW 78 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe--------eCCEEE
Confidence 566788999999999999954 57788999987655444567899999999999999999999885 235689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. ....+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+|++|||++...
T Consensus 79 ~v~e~~~~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 79 ILIEFCAGGAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred EEEEecCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccc
Confidence 99999999999988753 34568999999999999999999999 79999999999999999999999999998532
Q ss_pred C---------CCCCCcccccccc----CCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 612 K---------KGLESPLRGQYVS----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 612 ~---------~~~~~~~~~~~~~----~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
. .++..+.+||... ....++.++|||||||++|||++|++||...........+. ...+...
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~---~~~~~~~-- 228 (282)
T cd06643 154 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIA---KSEPPTL-- 228 (282)
T ss_pred cccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHh---hcCCCCC--
Confidence 1 1233355666542 22346779999999999999999999997544322211111 1111000
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.. +......+.+++.+||+.||++||++.++++.-
T Consensus 229 -~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 229 -AQ-------PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred -CC-------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 00 111224567999999999999999999998654
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=308.05 Aligned_cols=189 Identities=16% Similarity=0.244 Sum_probs=153.2
Q ss_pred CCeeecCCCccEEEEEec---CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEE
Q 004637 456 TNLIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
.++||+|+||+||+|+.. +++.||+|.++... ....+.+|++++++++||||+++++++.. ..+...++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~~~~l 77 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS------HADRKVWL 77 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEec------CCCcEEEE
Confidence 468999999999999854 46789999886432 23567899999999999999999988752 13456899
Q ss_pred EEecccCcchhhhccccc------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceee----cCCCceeE
Q 004637 533 VLEHISNGSLRDYLTDWK------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL----DKALTAKL 602 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl----d~~~~~kl 602 (740)
||||+.+ +|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||
T Consensus 78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl 153 (317)
T cd07868 78 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKI 153 (317)
T ss_pred EEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEE
Confidence 9999965 8888774321 22358899999999999999999998 799999999999999 45689999
Q ss_pred ecCCCCCCCC------------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCC
Q 004637 603 SGYNIPLPSK------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTS 656 (740)
Q Consensus 603 ~DFGla~~~~------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~ 656 (740)
+|||+++... .++..+.+||.......++.++||||+||++|||+||++||...
T Consensus 154 ~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 154 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9999985432 12334667777766667889999999999999999999999743
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=301.50 Aligned_cols=246 Identities=18% Similarity=0.291 Sum_probs=191.2
Q ss_pred cCCCCCCeeecCCCccEEEEEecC----CCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
++|++.+.||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++||||+++++++.
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------- 77 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT-------- 77 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc--------
Confidence 457788999999999999998543 3468999887543 334567899999999999999999999874
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
....++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+|++||
T Consensus 78 -~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~ 151 (270)
T cd05056 78 -ENPVWIVMELAPLGELRSYLQV--NKYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDF 151 (270)
T ss_pred -CCCcEEEEEcCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccC
Confidence 1336899999999999999964 23458999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCc
Q 004637 606 NIPLPSKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPS 674 (740)
Q Consensus 606 Gla~~~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 674 (740)
|+++..... ...+.+||... ...++.++|||||||++|||++ |+.||...........+.... ..
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~--~~- 227 (270)
T cd05056 152 GLSRYLEDESYYKASKGKLPIKWMAPESIN-FRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE--RL- 227 (270)
T ss_pred ceeeecccccceecCCCCccccccChhhhc-cCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--cC-
Confidence 998543211 12244555543 4567889999999999999996 999997655433322221110 00
Q ss_pred ccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 675 KLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 675 ~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
.. +......+.+++.+|+..+|++|||+.|+++.|+....
T Consensus 228 ~~------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 228 PM------------PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CC------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00 11123456789999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=314.00 Aligned_cols=229 Identities=23% Similarity=0.297 Sum_probs=176.1
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHH-HHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVE-LLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~-il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||+||+|+. .+|+.||+|++.... ......+.+|.. +++.++||||+++++++. .++..+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~--------~~~~~~ 72 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ--------TTEKLY 72 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEe--------cCCEEE
Confidence 4699999999999984 568999999997542 222345566655 567799999999998774 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++. ....+++..+..++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 73 FVLDFVNGGELFFHLQ---RERSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred EEEcCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 9999999999998885 34568999999999999999999998 79999999999999999999999999997532
Q ss_pred C---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 612 K---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 612 ~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
. .++..+++||... ...++.++|||||||++|||++|+.||...+.......+.. .+.. ..+
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~----~~~~----~~~ 217 (325)
T cd05604 147 IAQSDTTTTFCGTPEYLAPEVIR-KQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH----KPLV----LRP 217 (325)
T ss_pred CCCCCCcccccCChhhCCHHHHc-CCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc----CCcc----CCC
Confidence 1 1334456666654 45678899999999999999999999986554333222211 1100 111
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIED 716 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~e 716 (740)
. ....+.+++.+|++.||++||++.+
T Consensus 218 ~--------~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 218 G--------ASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred C--------CCHHHHHHHHHHhccCHHhcCCCCC
Confidence 1 1234568999999999999998863
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=299.52 Aligned_cols=245 Identities=17% Similarity=0.300 Sum_probs=192.2
Q ss_pred HhcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
..++|++.+.||+|+||.||+|...++..+|+|.++... ...+.+.+|++++++++|+||+++++++.. .
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------~ 73 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK---------E 73 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC---------C
Confidence 346788899999999999999998778889999887442 234678999999999999999999987641 3
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..+++|||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||.+
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 149 (260)
T cd05073 74 PIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLA 149 (260)
T ss_pred CeEEEEEeCCCCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcce
Confidence 479999999999999999642 34457899999999999999999998 79999999999999999999999999987
Q ss_pred CCCCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 609 LPSKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 609 ~~~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
.....+ ...+.+||+.. ...++.++|||||||++||++| |+.||...+.......+... ...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~---~~~--- 222 (260)
T cd05073 150 RVIEDNEYTAREGAKFPIKWTAPEAIN-FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG---YRM--- 222 (260)
T ss_pred eeccCCCcccccCCcccccccCHhHhc-cCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC---CCC---
Confidence 533211 11244555543 4557889999999999999999 89999865443333322211 000
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
........++.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 ---------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 ---------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0011123457799999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=308.38 Aligned_cols=251 Identities=17% Similarity=0.311 Sum_probs=193.8
Q ss_pred HhcCCCCCCeeecCCCccEEEEEec--------CCCEEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceeee
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCIL 518 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~ 518 (740)
..++|.+.+.||+|+||.||+|+.. ....||+|.++... ......+.+|+++++++ +||||++++++|.
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~- 88 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT- 88 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc-
Confidence 3467888999999999999999731 24579999987542 22345788999999999 6999999999885
Q ss_pred eccCCCCCCCceEEEEecccCcchhhhccccc-------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceec
Q 004637 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGN 585 (740)
Q Consensus 519 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr 585 (740)
.+...++||||+++|+|.+++.... ....+++.++..++.|++.||+|||+ .+|+||
T Consensus 89 -------~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~ 158 (314)
T cd05099 89 -------QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHR 158 (314)
T ss_pred -------cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeec
Confidence 2345899999999999999996532 12458999999999999999999998 799999
Q ss_pred CCCCCceeecCCCceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCC
Q 004637 586 NLKTENILLDKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVK 653 (740)
Q Consensus 586 DlKp~NILld~~~~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~ 653 (740)
||||+||++++++.+||+|||.++..... ...+.+||... ...++.++|||||||++|||++ |..||
T Consensus 159 dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~~l~el~~~g~~p~ 237 (314)
T cd05099 159 DLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALF-DRVYTHQSDVWSFGILMWEIFTLGGSPY 237 (314)
T ss_pred cccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHc-cCCcCccchhhHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999998643211 11345556543 4567889999999999999999 88999
Q ss_pred CCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 654 STSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
...........+... .. . ..+..+..++.+++.+||..||++||++.|+++.|+.+..
T Consensus 238 ~~~~~~~~~~~~~~~---~~---~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 238 PGIPVEELFKLLREG---HR---M---------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred CCCCHHHHHHHHHcC---CC---C---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 765544433332211 00 0 0011223456799999999999999999999999997754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=311.72 Aligned_cols=228 Identities=23% Similarity=0.311 Sum_probs=175.0
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHH-HHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVE-LLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~-il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||.||+|+. .+++.||+|++.... ......+.+|.. +++.++||||+++++++. ..+..|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~--------~~~~~~ 72 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ--------TAEKLY 72 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE--------cCCEEE
Confidence 4699999999999995 468899999997542 222344555654 678899999999998774 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++. ....+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 73 FVLDYVNGGELFFHLQ---RERCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred EEEcCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 9999999999998885 34567888899999999999999998 79999999999999999999999999987532
Q ss_pred C---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 612 K---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 612 ~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
. .++..+.+||... ...++.++|||||||++|||++|+.||...+.......+.. .+..+.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~----~~~~~~----- 216 (321)
T cd05603 147 VEPEETTSTFCGTPEYLAPEVLR-KEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH----KPLQLP----- 216 (321)
T ss_pred CCCCCccccccCCcccCCHHHhc-CCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc----CCCCCC-----
Confidence 1 1233456666654 45678899999999999999999999987654333322211 110111
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIE 715 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ 715 (740)
......+.+++.+|++.||++||++.
T Consensus 217 -------~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 217 -------GGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -------CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11123566999999999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=312.28 Aligned_cols=232 Identities=22% Similarity=0.277 Sum_probs=176.7
Q ss_pred CeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHH-HHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVE-LLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~-il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||+||+|+.. +++.||+|++.... ......+.+|.. +++.++||||+++++++. .++..|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~--------~~~~~~ 72 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ--------TADKLY 72 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEE--------cCCeEE
Confidence 46999999999999954 57889999997542 122234455544 567889999999998774 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. ...+.+.....++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 73 FVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred EEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 99999999999999853 4457788888999999999999999 79999999999999999999999999998532
Q ss_pred C---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 612 K---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 612 ~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
. .++..+.+||... ...++.++|||||||++|||++|+.||...........+.. .+......
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~----~~~~~~~~--- 218 (325)
T cd05602 147 IEHNGTTSTFCGTPEYLAPEVLH-KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN----KPLQLKPN--- 218 (325)
T ss_pred ccCCCCcccccCCccccCHHHHc-CCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh----CCcCCCCC---
Confidence 1 1344566667654 45678899999999999999999999986554433332221 11111111
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
....+.+++.+|++.||++||++.+.+.
T Consensus 219 ---------~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 219 ---------ITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred ---------CCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 1234568999999999999998875443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-35 Score=311.85 Aligned_cols=254 Identities=18% Similarity=0.252 Sum_probs=183.4
Q ss_pred CCCeeecC--CCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 455 PTNLIGEG--SQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 455 ~~~~iG~G--~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
+.++||+| +|++||+++. .+|+.||+|+++... ....+.+.+|+++++.++||||++++++|. .++.
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~--------~~~~ 73 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI--------ADNE 73 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE--------ECCE
Confidence 45789999 6789999984 578999999997543 223356778999999999999999999886 2355
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++++||+...
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 74 LWVVTSFMAYGSAKDLICTH-FMDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred EEEEEeccCCCcHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhh
Confidence 89999999999999998542 23358999999999999999999998 799999999999999999999999998642
Q ss_pred CCC----------------CCCCCccccccccCC-CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhc-
Q 004637 610 PSK----------------KGLESPLRGQYVSNQ-PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE- 671 (740)
Q Consensus 610 ~~~----------------~~~~~~~~~~~~~~~-~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~- 671 (740)
... .+...+.+||+.... ..++.++|||||||++|||++|+.||..................
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 229 (327)
T cd08227 150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 229 (327)
T ss_pred ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccc
Confidence 110 112224566665432 45789999999999999999999999754322211111000000
Q ss_pred C-------Ccccc-----cccCc-----------------cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 672 A-------PSKLR-----AEADP-----------------SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 672 ~-------~~~~~-----~~~~~-----------------~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
. +.... ...+. .............+.+++.+||+.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 230 LLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0 00000 00000 00001112233467899999999999999999999874
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=299.72 Aligned_cols=244 Identities=21% Similarity=0.281 Sum_probs=179.2
Q ss_pred CeeecCCCccEEEEEecC---CCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEE
Q 004637 457 NLIGEGSQGQLYKGFLTD---GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~---g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
+.||+|+||.||+|...+ +..+|+|.++.... .....+.+|+.++++++||||+++++++. .....++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~~~~l 72 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT--------EVTPYLL 72 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc--------CCCCcEE
Confidence 368999999999998543 45799998875432 23357889999999999999999999874 2345799
Q ss_pred EEecccCcchhhhcccccC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 533 VLEHISNGSLRDYLTDWKK--KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
||||+++|+|.++++.... ....++..+..++.|+++|++|||+ .+++||||||+||+++.++.+|++|||.++.
T Consensus 73 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~ 149 (269)
T cd05087 73 VMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHN 149 (269)
T ss_pred EEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCcccccc
Confidence 9999999999999964322 2346778888999999999999998 7999999999999999999999999999853
Q ss_pred CCC-----------CCCCccccccccCC------CCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcC
Q 004637 611 SKK-----------GLESPLRGQYVSNQ------PGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 611 ~~~-----------~~~~~~~~~~~~~~------~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
... +...+.+||..... ..++.++|||||||++|||++ |+.||.............. ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~---~~ 226 (269)
T cd05087 150 KYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVR---EQ 226 (269)
T ss_pred ccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhh---cc
Confidence 211 11234556654321 135789999999999999996 9999975443322211111 10
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
.....++.+... ....+.+++.+|| .+|++|||++||++.|+
T Consensus 227 ---~~~~~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 227 ---QLKLPKPRLKLP----LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ---cCCCCCCccCCC----CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 011111211111 1234568999999 58999999999998875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=304.39 Aligned_cols=244 Identities=20% Similarity=0.292 Sum_probs=189.1
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
+.|++.+.||+|+||.||+|+.. +++.||+|.+........+.+.+|++++++++||||+++++++. .++.
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~ 83 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY--------WDGK 83 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE--------eCCe
Confidence 56888999999999999999954 58899999998665555677899999999999999999999875 2346
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++++|..++.+ ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~~lv~e~~~~~~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 84 LWIMIEFCPGGAVDAIMLE--LDRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred EEEEEecCCCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccce
Confidence 8999999999999888753 23468999999999999999999998 799999999999999999999999999875
Q ss_pred CCCC---------CCCCccccccccC----CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 610 PSKK---------GLESPLRGQYVSN----QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 610 ~~~~---------~~~~~~~~~~~~~----~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
.... +...+.+||+... ...++.++|||||||++|||++|+.||...........+ ....+.
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~~~~-- 233 (292)
T cd06644 159 KNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI---AKSEPP-- 233 (292)
T ss_pred eccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHH---hcCCCc--
Confidence 3211 2234556665532 234678999999999999999999999754432211111 111100
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.... +......+.+++.+||+.||++||++.|+++.
T Consensus 234 -~~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 234 -TLSQ-------PSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred -cCCC-------CcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000 11122356789999999999999999999874
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=336.21 Aligned_cols=253 Identities=16% Similarity=0.236 Sum_probs=191.7
Q ss_pred HHHhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCC
Q 004637 447 EEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (740)
Q Consensus 447 ~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~ 523 (740)
....++|++.+.||+|+||+||+|+. .++..||+|.+.... ......+.+|+.++++++|||||+++++|...
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de---- 84 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK---- 84 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec----
Confidence 34557899999999999999999995 457789999987542 22346789999999999999999999987532
Q ss_pred CCCCCceEEEEecccCcchhhhccccc-CCCCCCHHHHHHHHHHHHHHHHHHHcCC----CCCceecCCCCCceeecC--
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGV----APGIFGNNLKTENILLDK-- 596 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~----~~~iiHrDlKp~NILld~-- 596 (740)
....+|+||||+++|+|.++|.... ....+++..++.|+.||+.||+|||+.. ..+||||||||+||||+.
T Consensus 85 --~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~ 162 (1021)
T PTZ00266 85 --ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGI 162 (1021)
T ss_pred --CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCc
Confidence 3356899999999999999996422 2356999999999999999999999732 135999999999999964
Q ss_pred ---------------CCceeEecCCCCCCCC--------CCCCCccccccccC-CCCCCCccceehhhHHHHHHHhCCCC
Q 004637 597 ---------------ALTAKLSGYNIPLPSK--------KGLESPLRGQYVSN-QPGDGAKEDVYQLGVILLQVITGKQV 652 (740)
Q Consensus 597 ---------------~~~~kl~DFGla~~~~--------~~~~~~~~~~~~~~-~~~~~~ksDVwSfGvil~ElltG~~p 652 (740)
...+||+|||++.... .++..|.+||.+.. ...++.++||||||||+|||+||+.|
T Consensus 163 ~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~P 242 (1021)
T PTZ00266 163 RHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTP 242 (1021)
T ss_pred cccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 2358999999985432 24555677776643 34578899999999999999999999
Q ss_pred CCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 653 KSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
|....... ..+.. ....+..... .....+.+|+..||..+|++||++.|++..
T Consensus 243 F~~~~~~~--qli~~-lk~~p~lpi~------------~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 243 FHKANNFS--QLISE-LKRGPDLPIK------------GKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred CCcCCcHH--HHHHH-HhcCCCCCcC------------CCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 97543221 11111 1111100000 012456799999999999999999999853
|
|
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=301.18 Aligned_cols=244 Identities=23% Similarity=0.300 Sum_probs=177.1
Q ss_pred CeeecCCCccEEEEEecC---CCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEE
Q 004637 457 NLIGEGSQGQLYKGFLTD---GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~---g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
+.||+|+||.||+|...+ ...+|+|.+.... ......+.+|+++++.++||||++++++|. .....++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~--------~~~~~~l 72 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI--------ESIPYLL 72 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEEC--------CCCceEE
Confidence 358999999999997543 3468888776432 223456889999999999999999999875 3455899
Q ss_pred EEecccCcchhhhcccccC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 533 VLEHISNGSLRDYLTDWKK--KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
||||+++|+|.+++..... ....++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++..
T Consensus 73 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 149 (269)
T cd05042 73 VLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALE 149 (269)
T ss_pred EEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccc
Confidence 9999999999999965332 2335678889999999999999999 7999999999999999999999999999853
Q ss_pred CCC-----------CCCCccccccccC------CCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcC
Q 004637 611 SKK-----------GLESPLRGQYVSN------QPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 611 ~~~-----------~~~~~~~~~~~~~------~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
... +...+.+||.... ...++.++|||||||++|||++ |..||......+...... ...
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~---~~~ 226 (269)
T cd05042 150 QYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVV---REQ 226 (269)
T ss_pred cccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh---hcc
Confidence 211 1122455554321 2345789999999999999999 778887543322222111 111
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
. ....++.+.. .....+.+++..|| .||++|||++||++.|.
T Consensus 227 ~---~~~~~~~~~~----~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 227 D---IKLPKPQLDL----KYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred C---ccCCCCcccc----cCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1 0111111111 12244557888898 49999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=304.60 Aligned_cols=247 Identities=19% Similarity=0.306 Sum_probs=190.0
Q ss_pred hcCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~ 522 (740)
.++|++.+.||+|+||.||+|+.. ++..||+|.++... ....+.+.+|++++++++||||++++++|.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~----- 78 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA----- 78 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc-----
Confidence 467888999999999999999853 46789999987543 223467889999999999999999999874
Q ss_pred CCCCCCceEEEEecccCcchhhhccccc-------------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCce
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWK-------------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIF 583 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ii 583 (740)
.+...++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+++
T Consensus 79 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~ 152 (288)
T cd05050 79 ---VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFV 152 (288)
T ss_pred ---CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCee
Confidence 3345899999999999999996421 11347889999999999999999998 7999
Q ss_pred ecCCCCCceeecCCCceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCC
Q 004637 584 GNNLKTENILLDKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQ 651 (740)
Q Consensus 584 HrDlKp~NILld~~~~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~ 651 (740)
||||||+||++++++.+||+|||++...... ...+.+||... ...++.++|||||||++|||++ |..
T Consensus 153 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~~~~~ 231 (288)
T cd05050 153 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIFSYGMQ 231 (288)
T ss_pred cccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHh-cCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999997532111 11244555443 3567889999999999999998 888
Q ss_pred CCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 652 VKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 652 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
||...........+.. .. ... .+.....++.+++.+||+.||++|||+.|+++.|++
T Consensus 232 p~~~~~~~~~~~~~~~---~~---~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 232 PYYGMAHEEVIYYVRD---GN---VLS---------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CCCCCCHHHHHHHHhc---CC---CCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 8875543332222211 11 000 011123467799999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=296.43 Aligned_cols=239 Identities=23% Similarity=0.375 Sum_probs=189.2
Q ss_pred CeeecCCCccEEEEEecC----CCEEEEEEeeccccc-ChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~-~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||.||+|...+ +..||+|.++..... ..+.+.+|++++++++|+||+++++++. .+...+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~~~~~~ 72 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCT--------EEEPLY 72 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeec--------CCCceE
Confidence 468999999999999643 789999999865433 2578899999999999999999999875 245689
Q ss_pred EEEecccCcchhhhcccccC------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 532 LVLEHISNGSLRDYLTDWKK------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
+||||+++|+|.+++..... ...+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 73 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~df 149 (262)
T cd00192 73 LVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDF 149 (262)
T ss_pred EEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccc
Confidence 99999999999999975311 3678999999999999999999999 79999999999999999999999999
Q ss_pred CCCCCCCC-----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCC
Q 004637 606 NIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAP 673 (740)
Q Consensus 606 Gla~~~~~-----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 673 (740)
|.+..... +...+.+||... ...++.++||||+||++|||++ |+.||...........+.. ...
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~---~~~ 225 (262)
T cd00192 150 GLSRDVYDDDYYRKKTGGKLPIRWMAPESLK-DGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK---GYR 225 (262)
T ss_pred ccccccccccccccccCCCcCccccCHHHhc-cCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc---CCC
Confidence 99864432 122345566544 3467889999999999999999 6999987654433333221 110
Q ss_pred cccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 674 ~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
...+.....++.+++.+||..+|++|||+.|+++.|+
T Consensus 226 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 ------------LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ------------CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0011112356779999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=305.28 Aligned_cols=260 Identities=23% Similarity=0.332 Sum_probs=196.7
Q ss_pred CCHHHHHHHhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhc-cCcccceeeceeee
Q 004637 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCIL 518 (740)
Q Consensus 441 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~ 518 (740)
++++++..++++|++.+.||+|+||.||+|.. .+++.+|+|.+.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 45566777889999999999999999999995 568899999986432 2346778899999999 79999999998863
Q ss_pred eccCCCCCCCceEEEEecccCcchhhhccccc-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC
Q 004637 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (740)
Q Consensus 519 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~ 597 (740)
... ..++..++||||+++|+|.++++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++++
T Consensus 91 ~~~---~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~ 164 (291)
T cd06639 91 ADK---LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTE 164 (291)
T ss_pred ccc---cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCC
Confidence 211 23456899999999999999885322 34568999999999999999999998 799999999999999999
Q ss_pred CceeEecCCCCCCCCC---------CCCCccccccccCCC----CCCCccceehhhHHHHHHHhCCCCCCCCccchhHHH
Q 004637 598 LTAKLSGYNIPLPSKK---------GLESPLRGQYVSNQP----GDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQ 664 (740)
Q Consensus 598 ~~~kl~DFGla~~~~~---------~~~~~~~~~~~~~~~----~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~ 664 (740)
+.+||+|||.+..... +...+.+||...... .++.++|||||||++|||++|+.||...........
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~ 244 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK 244 (291)
T ss_pred CCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHH
Confidence 9999999998753221 223345566543222 357899999999999999999999975432211111
Q ss_pred HHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 665 LETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+ ....+... .+ +.+....+.+++.+||+.+|++||++.|++++
T Consensus 245 ~---~~~~~~~~---~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 245 I---PRNPPPTL---LH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred H---hcCCCCCC---Cc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1 11111001 11 11122357799999999999999999999874
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=299.04 Aligned_cols=241 Identities=17% Similarity=0.255 Sum_probs=187.6
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
+|++.+.||+|+||.||+++. .+++.+|+|.++... ....+.+.+|+.++++++||||+++++++. .++.
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~ 72 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFE--------ADGH 72 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEE--------ECCE
Confidence 477889999999999999984 468899999986432 334467889999999999999999998874 3456
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++|+|.+++.. .....+++.....++.|++.||.|||+ .+|+|+||||+||++++++.++++|||.+.
T Consensus 73 ~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 73 LYIVMEYCDGGDLMQKIKL-QRGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEEEEeeCCCCcHHHHHHh-ccCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcce
Confidence 8999999999999998854 233457899999999999999999998 799999999999999999999999999985
Q ss_pred CCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 610 PSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 610 ~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
.... +...+.+||... ...++.++||||||+++|||++|+.||...+.......+.. .......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~--- 221 (255)
T cd08219 149 LLTSPGAYACTYVGTPYYVPPEIWE-NMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQ---GSYKPLP--- 221 (255)
T ss_pred eecccccccccccCCccccCHHHHc-cCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhc---CCCCCCC---
Confidence 3321 222344555543 44578899999999999999999999986543332222211 1100011
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
......+.+++.+||+.||++||++.|++..
T Consensus 222 ---------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 222 ---------SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---------cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1112346689999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=305.05 Aligned_cols=245 Identities=19% Similarity=0.329 Sum_probs=190.4
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
.++|++.+.||+|+||.||+|+. .+++.||+|.++.......+.+.+|++++++++||||+++++++. .+.
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 75 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF--------YEN 75 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe--------cCC
Confidence 45688889999999999999995 468899999998665555567899999999999999999999875 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 76 KLWILIEFCDGGALDSIMLE--LERGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred eEEEEeeccCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccc
Confidence 68999999999999999864 23468999999999999999999999 79999999999999999999999999987
Q ss_pred CCCC---------CCCCCcccccccc----CCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcc
Q 004637 609 LPSK---------KGLESPLRGQYVS----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 609 ~~~~---------~~~~~~~~~~~~~----~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
.... .++..+.+||... ....++.++|||||||++|||++|+.||...+.......+. ...+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~ 227 (280)
T cd06611 151 AKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKIL---KSEPPT 227 (280)
T ss_pred hhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHh---cCCCCC
Confidence 4322 1233345555542 12345779999999999999999999997654332221111 111000
Q ss_pred cccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 ~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
. . .+......+.+++.+||+.+|++||++.+++++
T Consensus 228 ~--------~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 228 L--------D--QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred c--------C--CcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0 0 011122356689999999999999999999876
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=298.45 Aligned_cols=241 Identities=22% Similarity=0.377 Sum_probs=189.1
Q ss_pred cCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
++|++.+.||+|+||.||+|.. +++.||+|.++... ..+.+.+|+.++++++||||+++++++.. +..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---------~~~ 73 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH---------NGL 73 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC---------CCc
Confidence 4588899999999999999975 57889999986432 34678999999999999999999988741 236
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
++||||+++|+|.+++... ....+++..+..++.|++.|++|||+ .+++||||||+||+++.++.+||+|||.+..
T Consensus 74 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~ 149 (254)
T cd05083 74 YIVMELMSKGNLVNFLRTR-GRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARV 149 (254)
T ss_pred EEEEECCCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCcccee
Confidence 9999999999999999642 23458899999999999999999998 7999999999999999999999999999864
Q ss_pred CCCC------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccccCcc
Q 004637 611 SKKG------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683 (740)
Q Consensus 611 ~~~~------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
...+ ...+.+||+.. ...++.++|||||||++|||++ |+.||...........+......
T Consensus 150 ~~~~~~~~~~~~~y~~pe~~~-~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------------ 216 (254)
T cd05083 150 GSMGVDNSKLPVKWTAPEALK-HKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRM------------ 216 (254)
T ss_pred ccccCCCCCCCceecCHHHhc-cCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCC------------
Confidence 3221 12244555443 4567889999999999999998 99999765544333322211100
Q ss_pred ccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 684 VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 684 l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
..+......+.+++.+||+.+|++||+++++++.|+.
T Consensus 217 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 217 ---EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ---CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0011123456799999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=300.63 Aligned_cols=249 Identities=18% Similarity=0.320 Sum_probs=193.5
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCC----EEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGS----RVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
.+|++.+.||+|+||.||+|... +|. .||+|.++.... .....+.+|++++++++||||++++++|..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 45778899999999999999854 333 589998875432 234678899999999999999999998852
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
...++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|
T Consensus 81 ---~~~~~v~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~d 152 (279)
T cd05057 81 ---SQVQLITQLMPLGCLLDYVRN--HKDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITD 152 (279)
T ss_pred ---CceEEEEecCCCCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECC
Confidence 347999999999999999964 33458999999999999999999998 7999999999999999999999999
Q ss_pred CCCCCCCCCCC-----------CCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcC
Q 004637 605 YNIPLPSKKGL-----------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 605 FGla~~~~~~~-----------~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
||.++...... ..+.+||... ...++.++|||||||++||++| |+.||......+....+..... .
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~ 230 (279)
T cd05057 153 FGLAKLLDVDEKEYHAEGGKVPIKWMALESIL-HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGER-L 230 (279)
T ss_pred CcccccccCcccceecCCCcccccccCHHHhh-cCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCC-C
Confidence 99986432211 1244455443 3456789999999999999999 9999986654443333321100 0
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhccc
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQE 729 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (740)
.. +..+...+.+++.+||..||++||++.++++.|..+.+.+.
T Consensus 231 --~~------------~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05057 231 --PQ------------PPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQ 273 (279)
T ss_pred --CC------------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence 00 01112346689999999999999999999999998866443
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=302.50 Aligned_cols=241 Identities=19% Similarity=0.299 Sum_probs=198.8
Q ss_pred cCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccccc--ChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~--~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.-|+..+.||+|.|+.|-.|+ .-+|..||||++.+.... ....+.+|++.|+.++|||||++|.+. ...
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi--------DTQ 89 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI--------DTQ 89 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh--------ccc
Confidence 447778899999999999998 457999999999865433 345789999999999999999999765 356
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceee-cCCCceeEecCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL-DKALTAKLSGYN 606 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl-d~~~~~kl~DFG 606 (740)
..+|||+|.-.+|+|+||+-. ....+.+....+|+.||..|+.|+|. ..+|||||||+||.+ .+-|-+|+.|||
T Consensus 90 TKlyLiLELGD~GDl~DyImK--He~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFG 164 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMK--HEEGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFG 164 (864)
T ss_pred ceEEEEEEecCCchHHHHHHh--hhccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeecc
Confidence 679999999999999999964 34458888999999999999999999 799999999999887 466899999999
Q ss_pred CCCCCC--------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 607 IPLPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 607 la~~~~--------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
++-... .|...|.+||.+.+..+..+++||||+|||||.|+.|++||...+..+...++..+....|
T Consensus 165 FSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvP----- 239 (864)
T KOG4717|consen 165 FSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVP----- 239 (864)
T ss_pred ccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCc-----
Confidence 984332 3455678889888777778899999999999999999999997666555555544433332
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.....+..++|..|+..||.+|.+.+||+..
T Consensus 240 -----------shvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 240 -----------SHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred -----------hhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 2334556699999999999999999999864
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=314.95 Aligned_cols=241 Identities=22% Similarity=0.322 Sum_probs=195.3
Q ss_pred CCCeeecCCCccEEEEEecC--CC--EEEEEEeeccccc-ChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 455 PTNLIGEGSQGQLYKGFLTD--GS--RVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 455 ~~~~iG~G~fg~Vy~~~~~~--g~--~vAvK~l~~~~~~-~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
..++||+|.||.|++|.+.. |+ .||||+++..... ...+|.+|+.+|.+++|||+|++||+... ..
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~---------qp 184 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD---------QP 184 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc---------ch
Confidence 35789999999999999653 43 6899999876543 56899999999999999999999998852 44
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
..+|||+++.|+|.+.|++ ..+..+-......|+.|||+||+||.+ ++.|||||..+|+|+-..-.+||+|||+.+
T Consensus 185 ~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmR 260 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMR 260 (1039)
T ss_pred hhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeeccccee
Confidence 7899999999999999987 556678888899999999999999999 899999999999999999999999999987
Q ss_pred CCCCCCCCcccc-----------ccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 610 PSKKGLESPLRG-----------QYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 610 ~~~~~~~~~~~~-----------~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
....+...|... ++......++.++|||+|||++|||+| |+.||.+....++.+.+.
T Consensus 261 aLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD----------- 329 (1039)
T KOG0199|consen 261 ALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID----------- 329 (1039)
T ss_pred ccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-----------
Confidence 665544333221 222233457889999999999999999 789998876655443332
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
..-+-.-+..|.+.+++++..||..+|++|||+..|.+++-.
T Consensus 330 ----~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 330 ----AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred ----ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 111122345677889999999999999999999999866543
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=313.64 Aligned_cols=232 Identities=19% Similarity=0.200 Sum_probs=178.0
Q ss_pred eecCCCccEEEEEe-cCCCEEEEEEeecccc---cChhHHHHHHHHHhhc---cCcccceeeceeeeeccCCCCCCCceE
Q 004637 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKL---RHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 459 iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l---~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
||+|+||+||+|+. .+++.||||++..... .....+..|..++.+. +||||+++++++. .+...|
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~--------~~~~~~ 72 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQ--------TDSDLY 72 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEe--------cCCeEE
Confidence 69999999999995 4689999999975421 1223455677777666 6999999998774 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++. ....+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++...
T Consensus 73 lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 73 LVTDYMSGGELFWHLQ---KEGRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred EEEcCCCCChHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 9999999999999885 34568999999999999999999999 79999999999999999999999999998532
Q ss_pred ---------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 612 ---------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 612 ---------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
..++..|.+||.......++.++|||||||++|||+||+.||...+.......+...... .. ..
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~----~~---~~ 219 (330)
T cd05586 147 LTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR----FP---KN 219 (330)
T ss_pred CCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC----CC---Cc
Confidence 123445677777665556789999999999999999999999865544333222111111 10 00
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCC----CHHHHHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRP----SIEDVLW 719 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RP----s~~evl~ 719 (740)
.....+.+++.+||+.||++|| ++.|+++
T Consensus 220 --------~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 220 --------VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred --------cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0123455899999999999998 5666665
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=304.24 Aligned_cols=248 Identities=19% Similarity=0.320 Sum_probs=191.3
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||+|+||+||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++. ...
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~ 76 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFL--------NEN 76 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEe--------cCC
Confidence 4577788999999999999995 468899999887543 334568899999999999999999999885 235
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++|+|.+++.. .+.+++.....++.+++.||.|||+. .+|+||||||+||++++++.++|+|||++
T Consensus 77 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~ 151 (284)
T cd06620 77 NICMCMEFMDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVS 151 (284)
T ss_pred EEEEEEecCCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcc
Confidence 68999999999999999853 45689999999999999999999963 58999999999999999999999999987
Q ss_pred CCCC-------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccc--------hhHHHHHHhhhcCC
Q 004637 609 LPSK-------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVD--------GLKLQLETCLAEAP 673 (740)
Q Consensus 609 ~~~~-------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~--------~~~~~~~~~~~~~~ 673 (740)
.... .++..+.+||... ...++.++|||||||++|||+||+.||...... .............+
T Consensus 152 ~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd06620 152 GELINSIADTFVGTSTYMSPERIQ-GGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP 230 (284)
T ss_pred cchhhhccCccccCcccCCHHHHc-cCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC
Confidence 5321 2333455666554 346788999999999999999999999854331 11111111111111
Q ss_pred cccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 674 ~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
+.+. ..+....+.+++.+|++.||++|||+.|++++...
T Consensus 231 --------~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~ 269 (284)
T cd06620 231 --------PRLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF 269 (284)
T ss_pred --------CCCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 0010 11133457799999999999999999999987543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=305.58 Aligned_cols=256 Identities=20% Similarity=0.324 Sum_probs=189.8
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++. .+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~ 72 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR--------RK 72 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc--------cC
Confidence 46888999999999999999965 589999999865432 23467889999999999999999999874 44
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
+..++||||+++++|.++... ...+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 73 ~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 73 KRLYLVFEFVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred CeEEEEEecCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeee
Confidence 568999999999998887642 3458999999999999999999998 7999999999999999999999999998
Q ss_pred CCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 608 PLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 608 a~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
+..... +...+.+||+......++.++|||||||++|||++|++||...........+.............
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07846 147 ARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQE 226 (286)
T ss_pred eeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHH
Confidence 754321 12234566665544567789999999999999999999997544322211111111111000000
Q ss_pred ----------ccCccccCC-----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 679 ----------EADPSVRGT-----YAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 679 ----------~~~~~l~~~-----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
...+..... ........+.+++.+||+.+|++||++.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 227 IFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000000000 011224567899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=297.51 Aligned_cols=240 Identities=22% Similarity=0.391 Sum_probs=185.2
Q ss_pred CCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccc------cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR------HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~------~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
+|++.+.||+|+||+||+|...+++.+|||.++.... ...+.+.+|++++++++|+||++++++|.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------- 72 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL-------- 72 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee--------
Confidence 4778899999999999999988899999999875421 12246889999999999999999999885
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
..+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+||
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~df 146 (265)
T cd06631 73 DDNTISIFMEFVPGGSISSILNR---FGPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDF 146 (265)
T ss_pred cCCeEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccc
Confidence 33568999999999999999953 3468899999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCC---------------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhh
Q 004637 606 NIPLPSK---------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 606 Gla~~~~---------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 670 (740)
|.+.... .+...+.+||+.. ...++.++|||||||++|||++|+.||...+.............
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 225 (265)
T cd06631 147 GCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVIN-ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRG 225 (265)
T ss_pred hhhHhhhhccccccccccccccCCCccccChhhhc-CCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccC
Confidence 9875321 1122234455443 45567899999999999999999999975432221111111000
Q ss_pred cCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 671 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
. .+.+.. .....+.+++.+||+.+|++||++.|+++
T Consensus 226 ~---------~~~~~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 226 L---------MPRLPD----SFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred C---------CCCCCC----CCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 011111 12245678999999999999999999986
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-35 Score=301.49 Aligned_cols=245 Identities=19% Similarity=0.298 Sum_probs=187.1
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
++|++.+.||+|+||.||+|+. .+++.||+|.++.........+.+|+.+++.++||||+++++++. .++.
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~--------~~~~ 80 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL--------RRDK 80 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEE--------eCCE
Confidence 4566778899999999999984 568899999998655444466889999999999999999999875 3456
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++|+|.+++.. .+.+++.+...++.|++.|++|||+ .+|+||||||+||+++.++.+||+|||++.
T Consensus 81 ~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd06645 81 LWICMEFCGGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSA 154 (267)
T ss_pred EEEEEeccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeee
Confidence 8999999999999999853 4568999999999999999999999 799999999999999999999999999874
Q ss_pred CCC---------CCCCCcccccccc--CCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 610 PSK---------KGLESPLRGQYVS--NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 610 ~~~---------~~~~~~~~~~~~~--~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
... .++..+.+||... ....++.++|||||||++|||++|+.||............... ...+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~ 233 (267)
T cd06645 155 QITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS-NFQPPKLKD 233 (267)
T ss_pred EccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc-CCCCCcccc
Confidence 321 2334456666543 2334678999999999999999999998654322211111110 000000000
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
. . .....+.+++.+|++.+|++||++++++++
T Consensus 234 ~------~----~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 234 K------M----KWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred c------C----CCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 0 0 112346689999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=297.44 Aligned_cols=239 Identities=23% Similarity=0.377 Sum_probs=184.2
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccccc---------ChhHHHHHHHHHhhccCcccceeeceeeeecc
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~---------~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~ 521 (740)
+|.+...||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|++++++++||||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---- 76 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL---- 76 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE----
Confidence 467789999999999999985 46889999988654321 1246888999999999999999999875
Q ss_pred CCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCcee
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (740)
Q Consensus 522 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~k 601 (740)
..+..++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||++++++.+|
T Consensus 77 ----~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 77 ----DADHLNIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred ----eCCccEEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEE
Confidence 33568999999999999999953 3568899999999999999999998 6999999999999999999999
Q ss_pred EecCCCCCCCCC---------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHH
Q 004637 602 LSGYNIPLPSKK---------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLE 666 (740)
Q Consensus 602 l~DFGla~~~~~---------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~ 666 (740)
|+|||.++.... +...+.+||... ...++.++|||||||++|||++|+.||........ +.
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~ 222 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVK-QTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA---IF 222 (267)
T ss_pred ecccCCCcccccccccCCccccccccCCCcCccChhHhc-cCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH---HH
Confidence 999998754431 112234445433 34567899999999999999999999975432211 11
Q ss_pred HhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 667 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
..... ..+.+ +......+.+++.+||+.||++||++.|+++.
T Consensus 223 ~~~~~--------~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 223 KIGEN--------ASPEI----PSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred HHhcc--------CCCcC----CcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 11110 11111 11223456789999999999999999999863
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=305.45 Aligned_cols=242 Identities=20% Similarity=0.358 Sum_probs=189.4
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
..+|++.+.||+|+||.||+|+. .+++.||+|.+........+.+.+|+.+++.++||||+++++++. .++
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------~~~ 89 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL--------VGD 89 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEe--------cCC
Confidence 36788999999999999999994 579999999998665555577889999999999999999999885 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++++|.+++.+ ..+++.++..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||.+
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~ 162 (297)
T cd06656 90 ELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (297)
T ss_pred EEEEeecccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccc
Confidence 68999999999999999843 357899999999999999999998 79999999999999999999999999987
Q ss_pred CCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 609 LPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
..... +...+.+||... ...++.++|||||||++|||++|+.||...+.......... ...+ ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~--~~~~----~~ 235 (297)
T cd06656 163 AQITPEQSKRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT--NGTP----EL 235 (297)
T ss_pred eEccCCccCcCcccCCccccCHHHHc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc--CCCC----CC
Confidence 53221 222344555543 45667899999999999999999999975433211111000 0000 00
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
. .+......+.+++.+||+.||++||++.|++++
T Consensus 236 ~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 236 Q-------NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred C-------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 011122446689999999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=301.79 Aligned_cols=259 Identities=20% Similarity=0.371 Sum_probs=195.8
Q ss_pred CCHHHHHHHhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhc-cCcccceeeceeee
Q 004637 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCIL 518 (740)
Q Consensus 441 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~ 518 (740)
.++.++..+.+.|++.+.||+|+||.||+|+. .+++.||+|.+..... ...++..|+.+++++ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 35566666778999999999999999999995 5688999999865432 335688899999999 69999999998863
Q ss_pred eccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC
Q 004637 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (740)
Q Consensus 519 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~ 598 (740)
.. ....+...+++|||+++|+|.+++... ....+++..+..++.|+++||+|||+ .+|+||||||+||++++++
T Consensus 85 ~~--~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 85 KS--PPGHDDQLWLVMEFCGAGSVTDLVKNT-KGNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENA 158 (282)
T ss_pred cc--ccCCCCEEEEEEEeCCCCcHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCC
Confidence 21 112456789999999999999998642 23457888899999999999999998 7999999999999999999
Q ss_pred ceeEecCCCCCCCC---------CCCCCccccccccC----CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHH
Q 004637 599 TAKLSGYNIPLPSK---------KGLESPLRGQYVSN----QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQL 665 (740)
Q Consensus 599 ~~kl~DFGla~~~~---------~~~~~~~~~~~~~~----~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~ 665 (740)
.+||+|||++.... .+...+.+||.... ...++.++|||||||++|||+||+.||...........+
T Consensus 159 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~ 238 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLI 238 (282)
T ss_pred CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhH
Confidence 99999999975322 12333556665432 345678999999999999999999999754321111111
Q ss_pred HHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 666 ETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
....+ +... .......+.+++.+||+.||++||++.|+++.
T Consensus 239 ---~~~~~--------~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 239 ---PRNPP--------PKLK---SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred ---hhCCC--------CCCc---ccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 01000 0000 01123467799999999999999999999763
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=307.13 Aligned_cols=244 Identities=20% Similarity=0.250 Sum_probs=199.2
Q ss_pred HhcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccccc---ChhHHHHHHHHHhhcc-CcccceeeceeeeeccCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDH 523 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~ 523 (740)
..+.|++.+.||+|.||.||+++.. +|+.+|+|.+++.... ..+.+.+|+++|+++. |||||.+++.+.
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e------ 106 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFE------ 106 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEE------
Confidence 4467888899999999999999955 5999999999866443 3468999999999998 999999999885
Q ss_pred CCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC----Cc
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA----LT 599 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~----~~ 599 (740)
+...+++|||+|.||.|.+.+... .+++.....++.|++.|++|||+ .+|+||||||+|+|+... +.
T Consensus 107 --~~~~~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 107 --DPDSVYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred --cCCeEEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCc
Confidence 345699999999999999999653 38999999999999999999999 799999999999999633 57
Q ss_pred eeEecCCCCCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhc
Q 004637 600 AKLSGYNIPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE 671 (740)
Q Consensus 600 ~kl~DFGla~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~ 671 (740)
+|++|||++..... |+..|.+||... ...|+.++||||.||++|.|++|.+||.+.........+......
T Consensus 178 ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~-~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~ 256 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLG-GRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFD 256 (382)
T ss_pred EEEeeCCCceEccCCceEeeecCCccccCchhhc-CCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCC
Confidence 99999999965433 455566766654 467899999999999999999999999987766555544333222
Q ss_pred CCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 672 ~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.+ ..+.......+.+++.+|+..||.+|+|+.+++++
T Consensus 257 f~------------~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 257 FT------------SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CC------------CCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 21 12222334556699999999999999999999996
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=299.72 Aligned_cols=241 Identities=19% Similarity=0.334 Sum_probs=183.8
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||+|+||.||+|+. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++.. .+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------~~ 72 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV--------EN 72 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE--------CC
Confidence 3677889999999999999984 578899999987542 2234578899999999999999999998863 34
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++|+|..+. .+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||++
T Consensus 73 ~~~lv~e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 73 RISICTEFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred EEEEEEecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 579999999999986553 36788889999999999999998 79999999999999999999999999998
Q ss_pred CCCC-------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchh----HHHHHHhhhcCCcccc
Q 004637 609 LPSK-------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGL----KLQLETCLAEAPSKLR 677 (740)
Q Consensus 609 ~~~~-------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~----~~~~~~~~~~~~~~~~ 677 (740)
.... .++..+.+||... ...++.++|||||||++|||++|+.||........ ...........+
T Consensus 143 ~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 217 (279)
T cd06619 143 TQLVNSIAKTYVGTNAYMAPERIS-GEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP---- 217 (279)
T ss_pred eecccccccCCCCChhhcCceeec-CCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC----
Confidence 5332 2233455666554 44678899999999999999999999974321110 011111111110
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
+.+.. ......+.+++.+|++.||++||+++|+++..
T Consensus 218 ----~~~~~---~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 218 ----PVLPV---GQFSEKFVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred ----CCCCC---CcCCHHHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 11100 11123567999999999999999999998764
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=308.61 Aligned_cols=249 Identities=18% Similarity=0.324 Sum_probs=192.1
Q ss_pred cCCCCCCeeecCCCccEEEEEec--------CCCEEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceeeeec
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~ 520 (740)
.+|++.+.||+|+||.||+|+.. ++..||+|.++... ....+++.+|+++++++ +||||++++++|.
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--- 88 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT--- 88 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc---
Confidence 46888999999999999999732 12368999887432 22346789999999999 7999999999885
Q ss_pred cCCCCCCCceEEEEecccCcchhhhccccc-------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCC
Q 004637 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL 587 (740)
Q Consensus 521 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl 587 (740)
.++..+++|||+++|+|.+++.... ....++|.+++.++.|+++||+|||+ .+|+||||
T Consensus 89 -----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dl 160 (334)
T cd05100 89 -----QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDL 160 (334)
T ss_pred -----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeecccc
Confidence 3345899999999999999986422 12358899999999999999999998 79999999
Q ss_pred CCCceeecCCCceeEecCCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCC
Q 004637 588 KTENILLDKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKST 655 (740)
Q Consensus 588 Kp~NILld~~~~~kl~DFGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~ 655 (740)
||+||+++.++.+||+|||+++..... ...+.+||... ...++.++|||||||++|||++ |..||..
T Consensus 161 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~ 239 (334)
T cd05100 161 AARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 239 (334)
T ss_pred ccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhc-cCCcCchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999998533211 11244555443 4567889999999999999999 8889876
Q ss_pred CccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 656 SEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
.........+... .. . ..+.....++.+++.+||+.+|++||++.|+++.|+.+..
T Consensus 240 ~~~~~~~~~~~~~---~~---~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 240 IPVEELFKLLKEG---HR---M---------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred CCHHHHHHHHHcC---CC---C---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 5544433322211 10 0 0011223467799999999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=292.86 Aligned_cols=239 Identities=20% Similarity=0.333 Sum_probs=192.6
Q ss_pred CCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
|++.++||+|+||.||||. ...|+.||||.+.... ..+++.+|+.||++++.|++|++||.|+ ....+|
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYF--------K~sDLW 104 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYF--------KHSDLW 104 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhc--------cCCceE
Confidence 5667899999999999998 4569999999987543 4578999999999999999999999775 334589
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC-
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP- 610 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~- 610 (740)
+|||||-.|+..|.++- +..++.+.++..+.+..++||+|||. ..-||||||+.|||++-+|.+|++|||.|-.
T Consensus 105 IVMEYCGAGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQL 179 (502)
T KOG0574|consen 105 IVMEYCGAGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQL 179 (502)
T ss_pred eehhhcCCCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchh
Confidence 99999999999999974 55679999999999999999999998 7889999999999999999999999999832
Q ss_pred --------CCCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 611 --------SKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 611 --------~~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
...|++.+++||... +-.|..++||||+|++..||..|++|+........... .| ....|
T Consensus 180 TDTMAKRNTVIGTPFWMAPEVI~-EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM-------IP----T~PPP 247 (502)
T KOG0574|consen 180 TDTMAKRNTVIGTPFWMAPEVIE-EIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM-------IP----TKPPP 247 (502)
T ss_pred hhhHHhhCccccCcccccHHHHH-HhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe-------cc----CCCCC
Confidence 233566666776543 56788999999999999999999999975433211110 01 11112
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.++ -+.....++-+++..|+.+.|++|-|+.+++++
T Consensus 248 TF~--KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 248 TFK--KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCC--ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 222 234445677899999999999999999988763
|
|
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=302.69 Aligned_cols=241 Identities=20% Similarity=0.393 Sum_probs=189.2
Q ss_pred cCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.+|++.+.||.|+||.||+|+ ..+++.||+|.+........+.+.+|+++++.++||||+++++++. .++.
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------~~~~ 90 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL--------VGDE 90 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEe--------cCce
Confidence 468888999999999999998 4578999999997665555678899999999999999999999885 3456
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++|+||+++|+|.+++.. ..+++.++..++.|++.|++|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 91 ~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 91 LFVVMEYLAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred EEEEEEecCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccch
Confidence 8999999999999998842 358999999999999999999999 799999999999999999999999999875
Q ss_pred CCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 610 PSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 610 ~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
.... +...+.+||... ...++.++|||||||++|||++|+.||...+.......+... ..+ ...
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~--~~~-~~~--- 236 (296)
T cd06655 164 QITPEQSKRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN--GTP-ELQ--- 236 (296)
T ss_pred hcccccccCCCcCCCccccCcchhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--CCc-ccC---
Confidence 3221 222344555543 445678999999999999999999999765432221111111 000 000
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.+......+.+++.+||..||++||++.+++..
T Consensus 237 -------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 237 -------NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred -------CcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 011122346689999999999999999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=308.17 Aligned_cols=247 Identities=16% Similarity=0.215 Sum_probs=184.9
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||+||+++. .+++.||+|++.... ....+.+.+|+.++..++|+||+++++++. .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~ 72 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ--------D 72 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe--------c
Confidence 4788999999999999999995 468999999997532 223456889999999999999999998774 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
++..|+||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 73 ENNLYLVMDYYVGGDLLTLLSK--FEDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred CCeEEEEEecCCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECC
Confidence 4668999999999999999953 23468899999999999999999999 799999999999999999999999999
Q ss_pred CCCCCC----------CCCCCccccccccC----CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC
Q 004637 607 IPLPSK----------KGLESPLRGQYVSN----QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 607 la~~~~----------~~~~~~~~~~~~~~----~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
++.... .++..+.+||.... ...++.++|||||||++|||++|+.||......+....+.. ..
T Consensus 148 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~---~~ 224 (331)
T cd05597 148 SCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN---HK 224 (331)
T ss_pred ceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHc---CC
Confidence 974321 13445666766542 24567899999999999999999999976543322222111 00
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhcccc--CCCCCCCHHHHHHHh
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSK--DAAKRPSIEDVLWNL 721 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~--dP~~RPs~~evl~~L 721 (740)
. .. . ..+. .......+.+++.+|+.. ++..||++.+++++-
T Consensus 225 ~-~~-~-~~~~-----~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp 267 (331)
T cd05597 225 E-HF-Q-FPPD-----VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHP 267 (331)
T ss_pred C-cc-c-CCCc-----cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCC
Confidence 0 00 0 0000 001223455777776654 344488999999873
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=294.68 Aligned_cols=247 Identities=21% Similarity=0.337 Sum_probs=192.1
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
.++|++.+.||+|+||.||+|.. .+++.+|+|.+........+.+.+|++++++++||||+++++++. .+.
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------~~~ 73 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL--------RRD 73 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEE--------eCC
Confidence 36788899999999999999995 457899999998665555678999999999999999999999875 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..+++|||+++++|.+++.. ....+++.++..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||.+
T Consensus 74 ~~~l~~e~~~~~~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 148 (262)
T cd06613 74 KLWIVMEYCGGGSLQDIYQV--TRGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVS 148 (262)
T ss_pred EEEEEEeCCCCCcHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccc
Confidence 68999999999999999864 22568899999999999999999998 79999999999999999999999999987
Q ss_pred CCCCC---------CCCCccccccccCC--CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 609 LPSKK---------GLESPLRGQYVSNQ--PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~--~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
..... +...+.+||..... +.++.++|||||||++|||+||+.||............... ...
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~--~~~---- 222 (262)
T cd06613 149 AQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKS--NFP---- 222 (262)
T ss_pred hhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--cCC----
Confidence 53221 22335566655432 26678999999999999999999999764432221111110 000
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.+.+ .........+.+++.+||..+|++|||+.+|+.+
T Consensus 223 ---~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 223 ---PPKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred ---Cccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0112234567799999999999999999999853
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=293.95 Aligned_cols=241 Identities=20% Similarity=0.244 Sum_probs=187.0
Q ss_pred CCCCCCeeecCCCccEEEEEecC-CCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
+|+..+.||.|.-|+||++++.+ +..+|+|++.+... +...+...|-+||+.++||.++.+|+.+. .+
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe--------t~ 149 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE--------TD 149 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee--------cc
Confidence 34456889999999999999654 68999999986532 23356777999999999999999998773 56
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
...|+|||||+||+|....+. +..+.+++..++.++.+|+-||+|||- .|||.|||||+|||+-++|++.|+||-+
T Consensus 150 ~~~cl~meyCpGGdL~~Lrqk-Qp~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDL 225 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQK-QPGKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDL 225 (459)
T ss_pred ceeEEEEecCCCccHHHHHhh-CCCCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccc
Confidence 779999999999999998875 566789999999999999999999998 8999999999999999999999999987
Q ss_pred CCCCCC-----------------------------------------------------------------CCCCccccc
Q 004637 608 PLPSKK-----------------------------------------------------------------GLESPLRGQ 622 (740)
Q Consensus 608 a~~~~~-----------------------------------------------------------------~~~~~~~~~ 622 (740)
+..... |+..|.+||
T Consensus 226 S~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPE 305 (459)
T KOG0610|consen 226 SLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPE 305 (459)
T ss_pred cccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccce
Confidence 621100 011122222
Q ss_pred cccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHh
Q 004637 623 YVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITIN 702 (740)
Q Consensus 623 ~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~ 702 (740)
.+. +.+.+.++|+|+|||++|||+.|+.||.+.+..+....+.......|+. .+....+.+||.+
T Consensus 306 vI~-G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~--------------~~vs~~akDLIr~ 370 (459)
T KOG0610|consen 306 VIR-GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE--------------PEVSSAAKDLIRK 370 (459)
T ss_pred eee-cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC--------------CcchhHHHHHHHH
Confidence 222 3345788999999999999999999999887666554443222222211 1223456799999
Q ss_pred ccccCCCCCCC----HHHHHH
Q 004637 703 CLSKDAAKRPS----IEDVLW 719 (740)
Q Consensus 703 cl~~dP~~RPs----~~evl~ 719 (740)
.|.+||++|.. +.||-+
T Consensus 371 LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 371 LLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred HhccChhhhhccccchHHhhc
Confidence 99999999987 666654
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=304.23 Aligned_cols=246 Identities=19% Similarity=0.336 Sum_probs=188.1
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCC----EEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGS----RVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~----~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
++|+..+.||+|+||.||+|+. .+|. .||+|.+..... ....++.+|+.++++++||||++++|+|..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~------ 80 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS------ 80 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC------
Confidence 4577789999999999999984 3444 578888864432 223468899999999999999999998852
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
...++++||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|
T Consensus 81 ---~~~~~v~e~~~~g~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~D 152 (303)
T cd05110 81 ---PTIQLVTQLMPHGCLLDYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITD 152 (303)
T ss_pred ---CCceeeehhcCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEcc
Confidence 225799999999999999864 33458899999999999999999998 7999999999999999999999999
Q ss_pred CCCCCCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcC
Q 004637 605 YNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 605 FGla~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
||+++..... ...+.+||... ...++.++|||||||++|||++ |+.||...........+.....
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-- 229 (303)
T cd05110 153 FGLARLLEGDEKEYNADGGKMPIKWMALECIH-YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER-- 229 (303)
T ss_pred ccccccccCcccccccCCCccccccCCHHHhc-cCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC--
Confidence 9998643211 11244455433 4557889999999999999998 8999976543333333221100
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
.. . +..+...+.+++.+||..+|++||++.|+++.|+.+..
T Consensus 230 ---~~---~-------~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 230 ---LP---Q-------PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred ---CC---C-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00 0 01122356789999999999999999999999997654
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=295.44 Aligned_cols=242 Identities=20% Similarity=0.383 Sum_probs=189.7
Q ss_pred cCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
.+|++.+.||+|+||.||+|...+++.+|+|.++... .....+.+|++++++++||||+++++++. .....
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~~ 74 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCT--------ERSPI 74 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEc--------cCCce
Confidence 3577789999999999999998778899999887433 23467999999999999999999998874 33458
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
++||||+++|+|.+++.. ....+++..+..++.|++.|++|||+ .+++||||||+||+++.++.+||+|||.+..
T Consensus 75 ~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~ 149 (256)
T cd05112 75 CLVFEFMEHGCLSDYLRA--QRGKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRF 149 (256)
T ss_pred EEEEEcCCCCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceee
Confidence 999999999999999864 23458899999999999999999998 6999999999999999999999999998753
Q ss_pred CCC-------C---CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 611 SKK-------G---LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 611 ~~~-------~---~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
... + ...+.+||... ...++.++|||||||++|||++ |+.||...........+.... ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~aPe~~~-~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------~~ 220 (256)
T cd05112 150 VLDDQYTSSTGTKFPVKWSSPEVFS-FSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF--------RL 220 (256)
T ss_pred cccCcccccCCCccchhhcCHhHhc-cCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC--------CC
Confidence 211 1 11244555543 4567789999999999999998 999997655433333222110 00
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
..+.. ....+.+++.+||+.+|++||++.|+++.|+
T Consensus 221 ~~~~~-------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 221 YKPRL-------ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred CCCCC-------CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 11111 1245779999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=295.95 Aligned_cols=242 Identities=23% Similarity=0.321 Sum_probs=187.6
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|+||.||+++. .+++.||+|.+.... ....+.+.+|++++++++|+|++++++.+. ..+.
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~ 73 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE-------GEDG 73 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec-------CCCC
Confidence 478899999999999999995 457899999997543 233457889999999999999999987653 1234
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++++|.+++... ....+++.++..++.|++.|++|||+ .+|+||||||+||+++.++.++|+|||++
T Consensus 74 ~~~lv~e~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 74 LLYIVMGFCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred EEEEEecccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccce
Confidence 579999999999999999642 23458999999999999999999998 79999999999999999999999999987
Q ss_pred CCCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 609 LPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
.... .+...+.+||... ...++.++|||||||+++||++|+.||...+.......+. .......
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~---~~~~~~~--- 222 (257)
T cd08223 150 RVLENQCDMASTLIGTPYYMSPELFS-NKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRII---EGKLPPM--- 222 (257)
T ss_pred EEecccCCccccccCCcCccChhHhc-CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH---hcCCCCC---
Confidence 4321 1233345555543 4567789999999999999999999997654332222111 1110001
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+......+.+++.+|++.||++||++.|++++
T Consensus 223 ---------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 223 ---------PKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ---------ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11223456799999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=302.04 Aligned_cols=255 Identities=19% Similarity=0.268 Sum_probs=188.2
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|+..+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|++++++++||||+++++++. .++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~ 72 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH--------TEN 72 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc--------cCC
Confidence 478889999999999999985 468999999987543 223357889999999999999999999874 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+. ++|.+++... ....+++..+..++.|+++||+|||+ .+++||||||+||++++++.+||+|||++
T Consensus 73 ~~~~v~e~~~-~~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 73 KLYLVFEFLH-QDLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred cEEEEeeccc-cCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccch
Confidence 6899999996 5898888642 34568999999999999999999998 79999999999999999999999999987
Q ss_pred CCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc--
Q 004637 609 LPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR-- 677 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 677 (740)
..... +...+.+||.......++.++|||||||++|||+||+.||...+.......+.......+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07860 148 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 227 (284)
T ss_pred hhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhh
Confidence 53321 1223556676655555678999999999999999999999765432222211111111100000
Q ss_pred ------------cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 678 ------------AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 ------------~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
......+. .........+.+++.+||+.||++|||++|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 228 VTSLPDYKPSFPKWARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred hhHHHHHHhhcccccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00000000 0000112346789999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=302.00 Aligned_cols=255 Identities=17% Similarity=0.235 Sum_probs=190.2
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccccc-----ChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH-----LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~-----~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
+|+..+.||+|+||.||+|.. .+++.||||.++..... ....+.+|++++++++|+||+++++++.
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------- 72 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG-------- 72 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee--------
Confidence 477889999999999999995 46899999999755322 2346778999999999999999999885
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.....++||||+ +|+|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 73 ~~~~~~lv~e~~-~~~L~~~i~~~--~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 73 HKSNINLVFEFM-ETDLEKVIKDK--SIVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred cCCEEEEEEccc-CCCHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccc
Confidence 245689999999 88999999642 2368999999999999999999999 79999999999999999999999999
Q ss_pred CCCCCCCCC---------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC-Cc-
Q 004637 606 NIPLPSKKG---------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA-PS- 674 (740)
Q Consensus 606 Gla~~~~~~---------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~- 674 (740)
|+++..... ...+.+||.......++.++|||||||++|||++|.+||...........+....... ..
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (298)
T cd07841 147 GLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEEN 226 (298)
T ss_pred eeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhh
Confidence 998543221 1224556665555567889999999999999999988887554332222221111100 00
Q ss_pred -----ccccccCccccCC-----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 675 -----KLRAEADPSVRGT-----YAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 675 -----~~~~~~~~~l~~~-----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
............. ........+.+++.+||+.||++|||+.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 227 WPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000000 111234567899999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=298.39 Aligned_cols=246 Identities=20% Similarity=0.315 Sum_probs=188.1
Q ss_pred cCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeeccccc-ChhHHHHHHHHHhhccCcccceeeceeeeeccCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~ 523 (740)
++|++.+.||+|+||.||+|+.. +.+.||+|.+...... ..+.+.+|++++++++||||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------ 78 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCR------ 78 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEEC------
Confidence 56888999999999999999853 2467999988754433 3467999999999999999999999874
Q ss_pred CCCCCceEEEEecccCcchhhhcccccCC------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKK------DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~ 597 (740)
.....++||||+++|+|.+++...... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~ 153 (275)
T cd05046 79 --EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQ 153 (275)
T ss_pred --CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCC
Confidence 334579999999999999999653321 268999999999999999999998 699999999999999999
Q ss_pred CceeEecCCCCCCCCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHH
Q 004637 598 LTAKLSGYNIPLPSKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLE 666 (740)
Q Consensus 598 ~~~kl~DFGla~~~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~ 666 (740)
+.+|++|||+++..... ...+.+||... ...++.++|||||||++|||++ |..||.............
T Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~ 232 (275)
T cd05046 154 REVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQ-EDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQ 232 (275)
T ss_pred CcEEEcccccccccCcccccccCCceeEEeecChhhhc-cCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHH
Confidence 99999999997532111 11244455433 3456788999999999999999 788886543333222221
Q ss_pred HhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 667 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
...... .. .......+.+++.+||+.||++||++.|+++.|.
T Consensus 233 ~~~~~~--~~------------~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 233 AGKLEL--PV------------PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred cCCcCC--CC------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 110000 00 1112346779999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=293.48 Aligned_cols=237 Identities=21% Similarity=0.392 Sum_probs=186.7
Q ss_pred CeeecCCCccEEEEEecCCCEEEEEEeeccccc-ChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEEe
Q 004637 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLE 535 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~E 535 (740)
++||+|+||.||+|...+++.||+|.++..... ..+.+.+|++++++++||||+++++++. .....++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~~~~v~e 72 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV--------QKQPIYIVME 72 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe--------cCCCeEEEEE
Confidence 468999999999999777999999998754332 3467899999999999999999999875 3356899999
Q ss_pred cccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCCC-
Q 004637 536 HISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKG- 614 (740)
Q Consensus 536 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~- 614 (740)
|+++++|.+++.. ....+++..+..++.+++.||+|||+ .+++||||||+||+++.++.+||+|||.+.....+
T Consensus 73 ~~~~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 147 (251)
T cd05041 73 LVPGGSLLTFLRK--KKNRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGI 147 (251)
T ss_pred cCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCc
Confidence 9999999999864 23467899999999999999999998 69999999999999999999999999998643311
Q ss_pred ----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcccccccCcc
Q 004637 615 ----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683 (740)
Q Consensus 615 ----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
...+.+||... ...++.++|||||||++|||+| |..||...........+... ..
T Consensus 148 ~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~---~~---------- 213 (251)
T cd05041 148 YTVSDGLKQIPIKWTAPEALN-YGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG---YR---------- 213 (251)
T ss_pred ceeccccCcceeccCChHhhc-cCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC---CC----------
Confidence 11244555543 4567889999999999999999 88888765443332222111 00
Q ss_pred ccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 684 VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 684 l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
...+.....++.+++.+|+..+|++||++.|+++.|+
T Consensus 214 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 214 --MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred --CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 0011122346779999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=293.59 Aligned_cols=241 Identities=24% Similarity=0.389 Sum_probs=186.1
Q ss_pred CCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc-----cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-----~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
+|+..+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|++++++++|+||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------- 72 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-------- 72 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe--------
Confidence 4677899999999999999965 789999999875432 23457889999999999999999999874
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.+...++||||+++++|.+++.. ...+++..+..++.|+++|++|||+ .+|+|+||||+||+++.++.+||+||
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 73 EEDNLYIFLELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred cCCeEEEEEEecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccC
Confidence 34568999999999999999953 3458899999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 606 NIPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 606 Gla~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
|.+..... +...+.+||.......++.++|+|||||++|||++|+.||.............. ........
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~ 224 (258)
T cd06632 147 GMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGR--SKELPPIP 224 (258)
T ss_pred ccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHh--cccCCCcC
Confidence 98753221 223344556554333378899999999999999999999975442211111110 00100111
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
. .....+.+++.+||+.+|++||++.|++..
T Consensus 225 ~------------~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 225 D------------HLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred C------------CcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 1 112445689999999999999999999864
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=296.23 Aligned_cols=242 Identities=22% Similarity=0.347 Sum_probs=182.7
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc-----cChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-----~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
.+|+..+.||+|+||.||+|.. .+++.||+|+++.... +..+.+.+|++++++++||||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 75 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD------ 75 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc------
Confidence 3688899999999999999985 4689999999864321 123468889999999999999999997752
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
..+...+++|||+++++|.+++.. ...+++.....++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 76 ~~~~~~~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 76 RAEKTLTIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred CCCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEcc
Confidence 123568999999999999999953 3458899999999999999999998 7999999999999999999999999
Q ss_pred CCCCCCCCC------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC
Q 004637 605 YNIPLPSKK------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 605 FGla~~~~~------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
||+++.... +...+.+||... ...++.++|||||||++|||++|+.||....... .+.......
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~---~~~~~~~~~ 225 (266)
T cd06651 150 FGASKRLQTICMSGTGIRSVTGTPYWMSPEVIS-GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA---AIFKIATQP 225 (266)
T ss_pred CCCccccccccccCCccccCCccccccCHHHhC-CCCCCchhhhHHHHHHHHHHHHCCCCccccchHH---HHHHHhcCC
Confidence 999853211 222345566554 3557889999999999999999999997543221 111111100
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
..+.+ +......+.+++ +||..+|++||+++||+++
T Consensus 226 -------~~~~~----~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 226 -------TNPQL----PSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred -------CCCCC----chhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 01111 111223344666 6888999999999999863
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=302.71 Aligned_cols=255 Identities=18% Similarity=0.253 Sum_probs=186.9
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|+||.||+|+. .+|+.||+|+++... ......+.+|++++++++||||+++++++. +..
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~--------~~~ 72 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLH--------SDK 72 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhc--------cCC
Confidence 477889999999999999995 468999999997542 223456788999999999999999998874 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++|+||++ ++|.+++.. ....+++..+..++.||++||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 73 ~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 73 KLTLVFEYCD-QDLKKYFDS--CNGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred ceEEEEecCC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchh
Confidence 6899999997 488887753 23568999999999999999999998 79999999999999999999999999988
Q ss_pred CCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCC-ccchhHHHHHHhhhcCCc----
Q 004637 609 LPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTS-EVDGLKLQLETCLAEAPS---- 674 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~-~~~~~~~~~~~~~~~~~~---- 674 (740)
+.... +...+.+||.......++.++|||||||++|||+||+.|+... +.......+.......+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (284)
T cd07839 147 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWP 226 (284)
T ss_pred hccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhH
Confidence 64321 2234566776655556788999999999999999999886432 222211111111110000
Q ss_pred ccccccC----ccccCC-----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 675 KLRAEAD----PSVRGT-----YAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 675 ~~~~~~~----~~l~~~-----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
......+ +..... ........+.+++.+||+.||++|||++|++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 227 GVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred HhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0000000 000000 011123466799999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=307.77 Aligned_cols=246 Identities=15% Similarity=0.185 Sum_probs=185.8
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||+||+++.. +++.||+|++.... ......+.+|+.++..++|+||+++++++. .
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~ 72 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ--------D 72 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe--------c
Confidence 46888999999999999999954 57889999986432 223345888999999999999999998774 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
.+..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~ey~~~g~L~~~l~~--~~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 73 ENNLYLVMDYYVGGDLLTLLSK--FEDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred CCEEEEEEeccCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecc
Confidence 4568999999999999999963 23468999999999999999999999 799999999999999999999999999
Q ss_pred CCCCC----------CCCCCCccccccccC----CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC
Q 004637 607 IPLPS----------KKGLESPLRGQYVSN----QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 607 la~~~----------~~~~~~~~~~~~~~~----~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
++... ..++..+.+||+... ...++.++|||||||++|||++|+.||...+.......+.....
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~-- 225 (332)
T cd05623 148 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE-- 225 (332)
T ss_pred hheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCc--
Confidence 87432 124455667776542 34578899999999999999999999986544333222211100
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCC--CCCCHHHHHHH
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAA--KRPSIEDVLWN 720 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~--~RPs~~evl~~ 720 (740)
.. .... ........+.+++.+|+..+++ .|+++.|++++
T Consensus 226 --~~--~~p~-----~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 226 --RF--QFPA-----QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred --cc--cCCC-----ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 00 0000 0011234566888887755444 47899999877
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=293.85 Aligned_cols=242 Identities=21% Similarity=0.299 Sum_probs=189.2
Q ss_pred CCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|+..+.||+|+||.||.++ ..+++.+++|.+.... ....+++.+|++++++++|+||+++++++. ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------~~~ 72 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM--------DDN 72 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe--------cCC
Confidence 47888999999999999998 4568899999987542 334467889999999999999999999885 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..+++|||+++|+|.+++... ....+++.++..++.|+++||+|||+ .+++||||||+||++++++.+||+|||.+
T Consensus 73 ~~~~~~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 73 TLLIEMEYANGGTLYDKIVRQ-KGQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred eEEEEEEecCCCcHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcce
Confidence 689999999999999999642 23568999999999999999999998 69999999999999999999999999987
Q ss_pred CCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 609 LPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
..... +...+.+||... ...++.++||||||+++|||++|+.||...........+. .... ...
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~ape~~~-~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~---~~~~---~~~ 221 (256)
T cd08221 149 KILGSEYSMAETVVGTPYYMSPELCQ-GVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIV---QGNY---TPV 221 (256)
T ss_pred EEcccccccccccCCCccccCHhhcC-CCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---cCCC---CCC
Confidence 53321 223344555543 3446789999999999999999999997654333222221 1111 000
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.......+.+++.+||..+|++||++.|+++.+
T Consensus 222 ---------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 222 ---------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ---------ccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 011234567999999999999999999999764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=294.81 Aligned_cols=242 Identities=22% Similarity=0.386 Sum_probs=189.8
Q ss_pred hcCCCCCCeeecCCCccEEEEEecC-CCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
.++|+..+.||+|+||.||+|+..+ ++.||+|.++.... .+++.+|++++++++||||+++++++. .+.
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~--------~~~ 71 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYF--------KNT 71 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeee--------cCC
Confidence 3678889999999999999999654 88999999875533 578999999999999999999999885 335
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..|+++||+++++|.+++.. ....+++..+..++.|+++||.|||+ .+|+||||+|+||++++++.+||+|||++
T Consensus 72 ~~~l~~e~~~~~~L~~~l~~--~~~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~ 146 (256)
T cd06612 72 DLWIVMEYCGAGSVSDIMKI--TNKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVS 146 (256)
T ss_pred cEEEEEecCCCCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccc
Confidence 68999999999999999853 34568999999999999999999998 69999999999999999999999999998
Q ss_pred CCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 609 LPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
..... +...+.+||... ...++.++|||||||++|||+||+.||...........+.. ..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~------ 216 (256)
T cd06612 147 GQLTDTMAKRNTVIGTPFWMAPEVIQ-EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN---KPP------ 216 (256)
T ss_pred hhcccCccccccccCCccccCHHHHh-cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc---CCC------
Confidence 54322 122345556543 45678899999999999999999999975433221111100 000
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+.+ ..+......+.+++.+||+.||++|||+.||++.
T Consensus 217 --~~~--~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 217 --PTL--SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred --CCC--CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 000 0111223457799999999999999999999863
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=302.95 Aligned_cols=245 Identities=18% Similarity=0.219 Sum_probs=187.4
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||.||+++. .+++.||+|.+..... ...+.+.+|+++++.++||||+++++++. .
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~ 72 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE--------T 72 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe--------c
Confidence 4688899999999999999995 4578999999875432 23356889999999999999999998774 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
++..++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+|++|||
T Consensus 73 ~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 73 KRHLCMVMEYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred CCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCC
Confidence 4568999999999999999953 3568999999999999999999998 799999999999999999999999999
Q ss_pred CCCCCC------------------------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhH
Q 004637 607 IPLPSK------------------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLK 662 (740)
Q Consensus 607 la~~~~------------------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~ 662 (740)
+++... .+...+.+||+.. ...++.++|||||||++|||++|+.||.+.......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~ 225 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVIL-RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF 225 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 875310 1122344555543 356788999999999999999999999865443322
Q ss_pred HHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 663 LQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
..........+ .... .....+.+++.+||+.||++||++.++.+.|+.
T Consensus 226 ~~~~~~~~~~~---------~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 226 GQVISDDIEWP---------EGDE----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHhcccCCC---------Cccc----cCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 22211111111 0000 122446699999999999999996655555543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=298.44 Aligned_cols=241 Identities=23% Similarity=0.375 Sum_probs=188.4
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||.|+||.||+|+.. +++.||+|.+.... ......+.+|++++++++|+||+++++++. .+.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 72 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL--------KGS 72 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE--------ECC
Confidence 46788899999999999999954 68899999987543 333467889999999999999999999875 235
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++|+||+++++|.+++.. ..+++..+..++.|++.|+.|||+ .+++||||+|+||++++++.++|+|||++
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 73 KLWIIMEYCGGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred eEEEEEEeeCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 68999999999999999853 278999999999999999999998 79999999999999999999999999998
Q ss_pred CCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 609 LPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
+.... +...+.+||+.. ...++.++|||||||++|||+||+.||...+.......+.. ..+......
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~---~~~~~~~~~ 221 (274)
T cd06609 146 GQLTSTMSKRNTFVGTPFWMAPEVIK-QSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPK---NNPPSLEGN 221 (274)
T ss_pred eeecccccccccccCCccccChhhhc-cCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhh---cCCCCCccc
Confidence 54322 122345556554 34478999999999999999999999975443222211111 111111100
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.....+.+++.+||..||++||++++++++-
T Consensus 222 -----------~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~ 252 (274)
T cd06609 222 -----------KFSKPFKDFVSLCLNKDPKERPSAKELLKHK 252 (274)
T ss_pred -----------ccCHHHHHHHHHHhhCChhhCcCHHHHhhCh
Confidence 0223466899999999999999999998753
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=295.54 Aligned_cols=249 Identities=21% Similarity=0.383 Sum_probs=191.4
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||.|+||+||+|.. .++..+|+|++.... ....+.+.+|+++++.++|+||+++++.+. .+.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~ 72 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV--------VGD 72 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe--------eCC
Confidence 4788999999999999999994 468899999987543 224567899999999999999999998774 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++++|.++++.......+++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 73 ~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 73 ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred EEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 689999999999999999653333568999999999999999999998 79999999999999999999999999987
Q ss_pred CCCCC-------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcc
Q 004637 609 LPSKK-------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 609 ~~~~~-------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
..... +...+.+||+......++.++|||||||++|||++|+.||.......... ......+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~ 226 (267)
T cd06610 150 ASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLM---LTLQNDPPS 226 (267)
T ss_pred HHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHH---HHhcCCCCC
Confidence 42221 22234456655544467889999999999999999999997544322111 111111111
Q ss_pred cccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 ~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
...... .......+.+++.+||+.||++||++.|+++.
T Consensus 227 ~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 227 LETGAD-------YKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred cCCccc-------cccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111000 11223566799999999999999999999864
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=294.68 Aligned_cols=243 Identities=21% Similarity=0.277 Sum_probs=175.8
Q ss_pred eeecCCCccEEEEEecCCC---EEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEE
Q 004637 458 LIGEGSQGQLYKGFLTDGS---RVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533 (740)
Q Consensus 458 ~iG~G~fg~Vy~~~~~~g~---~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV 533 (740)
.||+|+||.||+|...++. .+++|.++... ....+.+.+|+.+++.++||||++++++|. .....++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~--------~~~~~~lv 73 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCV--------EAIPYLLV 73 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEec--------CCCccEEE
Confidence 5899999999999854433 45666665432 234568999999999999999999999885 23458999
Q ss_pred EecccCcchhhhccccc-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCC
Q 004637 534 LEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (740)
Q Consensus 534 ~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 612 (740)
|||+++|+|.++++... .....++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++....
T Consensus 74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~ 150 (268)
T cd05086 74 FEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRY 150 (268)
T ss_pred EecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccC
Confidence 99999999999996532 22346777888999999999999998 799999999999999999999999999875321
Q ss_pred -----------CCCCCccccccccC------CCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCc
Q 004637 613 -----------KGLESPLRGQYVSN------QPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPS 674 (740)
Q Consensus 613 -----------~~~~~~~~~~~~~~------~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 674 (740)
.+...+.+||+... ...++.++|||||||++|||++ |..||...........+ ....
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~---~~~~-- 225 (268)
T cd05086 151 KEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHV---IKDQ-- 225 (268)
T ss_pred cchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---Hhhc--
Confidence 11223455555421 1234679999999999999997 56677654432222221 1111
Q ss_pred ccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 675 KLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 675 ~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
.....++.+...+. ..+.+++..|| .+|++||+++||++.|.
T Consensus 226 -~~~~~~~~~~~~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 226 -QVKLFKPQLELPYS----ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred -ccccCCCccCCCCc----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 11122222222222 34567888999 67999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=302.95 Aligned_cols=189 Identities=16% Similarity=0.248 Sum_probs=152.4
Q ss_pred CCeeecCCCccEEEEEec---CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEE
Q 004637 456 TNLIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
..+||+|+||+||+|+.. ++..||+|.++... ....+.+|++++++++||||+++++++... .+...++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~~~l 77 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSH------SDRKVWL 77 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEecc------CCCeEEE
Confidence 468999999999999854 35789999886432 235688999999999999999999987532 3456899
Q ss_pred EEecccCcchhhhcccc------cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceee----cCCCceeE
Q 004637 533 VLEHISNGSLRDYLTDW------KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL----DKALTAKL 602 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl----d~~~~~kl 602 (740)
||||+++ +|.+++... .....+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||
T Consensus 78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl 153 (317)
T cd07867 78 LFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKI 153 (317)
T ss_pred EEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEE
Confidence 9999975 887776421 122358899999999999999999998 799999999999999 56789999
Q ss_pred ecCCCCCCCCC------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCC
Q 004637 603 SGYNIPLPSKK------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTS 656 (740)
Q Consensus 603 ~DFGla~~~~~------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~ 656 (740)
+|||+++.... ++..+.+||.......++.++|||||||++|||+||++||...
T Consensus 154 ~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 154 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 99999864321 2233567776665566789999999999999999999999743
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=297.45 Aligned_cols=239 Identities=20% Similarity=0.343 Sum_probs=188.2
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
..|+..+.||+|+||.||+|... +++.||+|.++... ....+.+.+|++++++++||||+++++++. ++.
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 75 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL--------KGT 75 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--------ECC
Confidence 34667889999999999999954 58899999987543 233467889999999999999999999885 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++|+|.+++.. ..+++.+...++.|++.||+|||+ .+++|+||+|+||+++.++.++++|||++
T Consensus 76 ~~~lv~e~~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 76 KLWIIMEYLGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred EEEEEEecCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccc
Confidence 68999999999999999853 458889999999999999999998 79999999999999999999999999998
Q ss_pred CCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 609 LPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
..... +...+.+||... ....+.++|||||||++|||+||+.||...........+ ....
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~apE~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~---~~~~------- 217 (277)
T cd06640 149 GQLTDTQIKRNTFVGTPFWMAPEVIQ-QSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI---PKNN------- 217 (277)
T ss_pred eeccCCccccccccCcccccCHhHhc-cCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh---hcCC-------
Confidence 43321 122345555543 345688999999999999999999999754432221111 0000
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
...........+.+++.+||+.+|++||++.|+++.
T Consensus 218 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 218 -----PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred -----CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 011223345567799999999999999999999876
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=299.76 Aligned_cols=256 Identities=19% Similarity=0.289 Sum_probs=187.3
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||+|+||.||+|+.. +++.||+|.+..... .....+.+|++++++++||||+++++++. .++
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~ 76 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIH--------TKK 76 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEe--------cCC
Confidence 67888999999999999999954 689999999875432 23356778999999999999999999874 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++ +|.+++.. ....+++.....++.|+++||.|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 77 ~~~lv~e~~~~-~L~~~~~~--~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 150 (291)
T cd07844 77 TLTLVFEYLDT-DLKQYMDD--CGGGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLA 150 (291)
T ss_pred eEEEEEecCCC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccc
Confidence 68999999985 99998864 23468899999999999999999998 79999999999999999999999999987
Q ss_pred CCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCcc-chhHHHHHHhhhcC-Ccccc
Q 004637 609 LPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEV-DGLKLQLETCLAEA-PSKLR 677 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~-~~~~~~~~~~~~~~-~~~~~ 677 (740)
+.... +...+.+||.......++.++|||||||++|||++|+.||..... ......+....... +....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07844 151 RAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWP 230 (291)
T ss_pred cccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhh
Confidence 53211 122345566655455678899999999999999999999975431 11111111111100 00000
Q ss_pred cc------c--------CccccCCC-cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 678 AE------A--------DPSVRGTY-AYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 ~~------~--------~~~l~~~~-~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.. . ...+.... .......+.+++.+|++.+|++|||+.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 231 GVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00 0 00000000 00112456799999999999999999998863
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-34 Score=295.33 Aligned_cols=245 Identities=22% Similarity=0.368 Sum_probs=185.3
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc---c-------ChhHHHHHHHHHhhccCcccceeeceeeeec
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---H-------LPQSLMQHVELLSKLRHRHLVSILGHCILTY 520 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~-------~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~ 520 (740)
+|.+.+.||+|+||.||+|.. .+|+.||+|.++.... . ..+.+.+|++++++++||||+++++++.
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--- 78 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET--- 78 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec---
Confidence 467789999999999999984 4689999999864211 1 1246788999999999999999999874
Q ss_pred cCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCce
Q 004637 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTA 600 (740)
Q Consensus 521 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~ 600 (740)
.++..++||||+++|+|.++++. ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+
T Consensus 79 -----~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~ 147 (272)
T cd06629 79 -----TEEYLSIFLEYVPGGSIGSCLRT---YGRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGIC 147 (272)
T ss_pred -----cCCceEEEEecCCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeE
Confidence 34568999999999999999964 3568999999999999999999998 799999999999999999999
Q ss_pred eEecCCCCCCCCC-----------CCCCccccccccCCC-CCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHh
Q 004637 601 KLSGYNIPLPSKK-----------GLESPLRGQYVSNQP-GDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETC 668 (740)
Q Consensus 601 kl~DFGla~~~~~-----------~~~~~~~~~~~~~~~-~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~ 668 (740)
|++|||+++.... +...+.+||...... .++.++||||||+++||+++|+.||....... ......
T Consensus 148 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~ 225 (272)
T cd06629 148 KISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA--AMFKLG 225 (272)
T ss_pred EEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH--HHHHhh
Confidence 9999999854321 122344555544332 46889999999999999999999996433211 111111
Q ss_pred hhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 669 LAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 669 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
... .....++. ...+....+.+++.+||..||++||+++||++.
T Consensus 226 ~~~----~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 226 NKR----SAPPIPPD----VSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ccc----cCCcCCcc----ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 000 01111111 111223567799999999999999999999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=306.96 Aligned_cols=246 Identities=15% Similarity=0.184 Sum_probs=185.6
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||+||+++.. +++.||+|++.... ......+.+|+.++..++|+||+++++++. .
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~--------~ 72 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ--------D 72 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--------c
Confidence 47888999999999999999954 68899999997532 223345788999999999999999998774 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
++..|+||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~Ey~~gg~L~~~l~~--~~~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 73 ENYLYLVMDYYVGGDLLTLLSK--FEDRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred CCEEEEEEeCCCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEecc
Confidence 4668999999999999999964 23468899999999999999999998 799999999999999999999999999
Q ss_pred CCCCCC----------CCCCCccccccccCC----CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC
Q 004637 607 IPLPSK----------KGLESPLRGQYVSNQ----PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 607 la~~~~----------~~~~~~~~~~~~~~~----~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
+++... .++..+.+||..... ..++.++|||||||++|||++|+.||...+.......+.......
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~ 227 (331)
T cd05624 148 SCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 227 (331)
T ss_pred ceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc
Confidence 974321 244456677765421 356789999999999999999999998654433222221110000
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCC--CCCHHHHHHH
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAK--RPSIEDVLWN 720 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~~ 720 (740)
.. .+.. .+....+.+++.+|+..++++ |+++++++++
T Consensus 228 --~~----p~~~-----~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 228 --QF----PSHI-----TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred --cC----CCcc-----ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 00 0000 112345668899988865544 4688888765
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-34 Score=295.79 Aligned_cols=254 Identities=22% Similarity=0.394 Sum_probs=193.8
Q ss_pred HHhcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCC
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 448 ~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~ 525 (740)
.++++|++.+.||+|+||.||+|+.. +++.+|+|++..... ..+.+.+|+++++++ +|+||+++++++..... ..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~--~~ 79 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP--PG 79 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCC--CC
Confidence 35688999999999999999999964 578999999875543 346789999999999 69999999999864321 12
Q ss_pred CCCceEEEEecccCcchhhhccccc-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
.+...++||||+++++|.+++.... ....+++..+..++.|+++||+|||+ .+++|+||+|+||++++++.+||+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECC
Confidence 4567899999999999999986422 24578999999999999999999998 7999999999999999999999999
Q ss_pred CCCCCCCC---------CCCCCccccccccC----CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhc
Q 004637 605 YNIPLPSK---------KGLESPLRGQYVSN----QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE 671 (740)
Q Consensus 605 FGla~~~~---------~~~~~~~~~~~~~~----~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~ 671 (740)
||.+.... .+...+.+||.... ...++.++|||||||++|||+||+.||...........+. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~ 233 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIP---RN 233 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhh---cc
Confidence 99874321 12333556665432 2346789999999999999999999997543222111111 11
Q ss_pred CCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 672 ~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.+ +.+. ........+.+++.+||..||++|||+.|+++.
T Consensus 234 ~~--------~~~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 234 PP--------PTLK--SPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred CC--------CCCC--chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 10 0000 111233467799999999999999999999863
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=293.16 Aligned_cols=241 Identities=18% Similarity=0.285 Sum_probs=188.1
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|+||.||+++. .+|+.||+|.+.... ....+++.+|++++++++||||+++++++. ..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~ 72 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE--------ENG 72 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec--------CCC
Confidence 478889999999999999984 568999999987542 233457899999999999999999998774 445
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++++|.+++... ....+++.++..++.|++.|++|||+ .+++|+||+|+||+++.++.++++|||.+
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 73 NLYIVMDYCEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred eEEEEEecCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 789999999999999998642 23357899999999999999999998 79999999999999999999999999998
Q ss_pred CCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 609 LPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
..... +...+.+||... ...++.++|||||||+++||+||+.||...+.......+ ........
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~---~~~~~~~~--- 221 (256)
T cd08218 149 RVLNSTVELARTCIGTPYYLSPEICE-NRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKI---IRGSYPPV--- 221 (256)
T ss_pred eecCcchhhhhhccCCccccCHHHhC-CCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHH---hcCCCCCC---
Confidence 54322 222344555543 445678999999999999999999999755433322211 11111001
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+......+.+++.+||+.+|++||++.||++.
T Consensus 222 ---------~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 222 ---------SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ---------cccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 11123456799999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=298.17 Aligned_cols=255 Identities=19% Similarity=0.269 Sum_probs=191.9
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|+.++++++||||+++++++. .+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~~~ 72 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP--------HGS 72 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe--------cCC
Confidence 478889999999999999995 468999999997653 333567999999999999999999999875 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+ +++|.+++.. ....+++.++..++.|+++||+|||+ .+|+|+||||+||+++.++.++++|||.+
T Consensus 73 ~~~~v~e~~-~~~L~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 73 GFVLVMEYM-PSDLSEVLRD--EERPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred eeEEEeccc-CCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 689999999 9999999864 23568999999999999999999998 79999999999999999999999999987
Q ss_pred CCCCC----------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC-Ccc--
Q 004637 609 LPSKK----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA-PSK-- 675 (740)
Q Consensus 609 ~~~~~----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~-- 675 (740)
..... +...+.+||.......++.++||||+||++|||+||++||...........+....... +..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07832 147 RLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWP 226 (286)
T ss_pred ccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHh
Confidence 54322 22335566766555567889999999999999999988887554332222222111100 000
Q ss_pred -------cccccCcccc----CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 676 -------LRAEADPSVR----GTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 -------~~~~~~~~l~----~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
......+.-. .....+....+.+++.+|+..||++||+++++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 227 GLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000 00011223677899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=298.53 Aligned_cols=245 Identities=26% Similarity=0.403 Sum_probs=187.4
Q ss_pred CCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccccCh--hHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 453 FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLP--QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~--~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
|++.+.||+|+||+||+++.. +++.||+|++........ ....+|+.++++++||||+++++++.. ...
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--------~~~ 72 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD--------DNY 72 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE--------SSE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc--------ccc
Confidence 456789999999999999955 467899999986643222 234569999999999999999998863 456
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++++|.+++. ....+++..+..++.|+++||+|||+ .+|+||||||+||++++++.++|+|||.+.
T Consensus 73 ~~~v~~~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 73 LYIVMEYCPGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEEEEETTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred cccccccccccccccccc---cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence 899999999999999995 34568999999999999999999999 799999999999999999999999999985
Q ss_pred CC---------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 610 PS---------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 610 ~~---------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
.. ..++..+.+||.......++.++||||+|+++|||++|+.||...........+....... .....
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 223 (260)
T PF00069_consen 147 KLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRP---LPSSS 223 (260)
T ss_dssp ESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTH---HHHHT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccc---ccccc
Confidence 31 1223335556665435677899999999999999999999998653222222222211110 00000
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.........+.+++.+||+.||++||++.|+++.
T Consensus 224 ------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 224 ------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp ------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred ------cccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000012567799999999999999999999864
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=294.16 Aligned_cols=251 Identities=18% Similarity=0.288 Sum_probs=186.8
Q ss_pred CCCCCeeecCCCccEEEEEec----CCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
|.+.+.||+|+||.||+|... +++.||||+++... ....+++.+|++++++++||||+++++++...... ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~--~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAK--GR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCC--Cc
Confidence 566789999999999999853 36889999987542 22345788999999999999999999987532110 11
Q ss_pred CCceEEEEecccCcchhhhcccc---cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEe
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDW---KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~ 603 (740)
....++++||+++|+|.+++... .....+++.....++.|++.||+|||+ .+|+||||||+||+++.++.+|++
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEEC
Confidence 12357899999999999887431 122357889999999999999999998 799999999999999999999999
Q ss_pred cCCCCCCCCCCC-----------CCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhc
Q 004637 604 GYNIPLPSKKGL-----------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAE 671 (740)
Q Consensus 604 DFGla~~~~~~~-----------~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 671 (740)
|||.++...... ..+.+||.. ....++.++|||||||++|||++ |++||...+.......+...
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~-~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~--- 231 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESL-ADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG--- 231 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHH-hcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC---
Confidence 999986432211 112233332 23456789999999999999999 88998765443332222211
Q ss_pred CCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 672 ~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
.. .. .+......+.+++.+||+.+|++||++.|+++.|+.+
T Consensus 232 ~~--~~----------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 NR--LK----------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred Cc--CC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 00 0011234677999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-34 Score=296.82 Aligned_cols=255 Identities=16% Similarity=0.240 Sum_probs=188.1
Q ss_pred CCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCCCCCc
Q 004637 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
|++.+.||+|+||.||+|+. .+++.||+|+++... ........+|+.++.++. |+||+++++++... ..+.
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~------~~~~ 74 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR------KTGR 74 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC------CCCc
Confidence 56778999999999999994 568999999987542 222234567899999995 99999999988531 2256
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||++ |+|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++. +.+||+|||++.
T Consensus 75 ~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 75 LALVFELMD-MNLYELIKG--RKRPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred EEEEEecCC-ccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEeccccc
Confidence 899999997 588888753 23568999999999999999999998 79999999999999999 999999999985
Q ss_pred CCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc-
Q 004637 610 PSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA- 680 (740)
Q Consensus 610 ~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 680 (740)
.... ++..+.+||.......++.++|||||||++|||++|+.||...+..+....+.......+..+....
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07831 148 GIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFR 227 (282)
T ss_pred ccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhc
Confidence 4321 2233556676555556788999999999999999999999876544433333222211111110000
Q ss_pred --------CccccC----CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 681 --------DPSVRG----TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 681 --------~~~l~~----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.+.... .........+.+++.+||+.+|++||+++|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 228 KSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 000000 0011235678899999999999999999999864
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=299.49 Aligned_cols=238 Identities=21% Similarity=0.363 Sum_probs=185.4
Q ss_pred CCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
|+..+.||+|+||.||+|.. .+++.||+|.++... ....+.+.+|++++++++||||+++++++. .+...
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~ 77 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL--------KGTKL 77 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccc--------cCCce
Confidence 45567899999999999985 457899999987443 233457899999999999999999999875 34568
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
++||||+++++|.+++. ...+++..+..++.|+++|++|||+ .+++|+||||+||++++++.+|++|||++..
T Consensus 78 ~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~ 150 (277)
T cd06642 78 WIIMEYLGGGSALDLLK----PGPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQ 150 (277)
T ss_pred EEEEEccCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEcccccccc
Confidence 99999999999999884 2458899999999999999999998 7999999999999999999999999999854
Q ss_pred CCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccC
Q 004637 611 SKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEAD 681 (740)
Q Consensus 611 ~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (740)
... +...+.+||+.. ...++.++|||||||++|||+||+.|+...........+. ... .
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~---~~~--------~ 218 (277)
T cd06642 151 LTDTQIKRNTFVGTPFWMAPEVIK-QSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP---KNS--------P 218 (277)
T ss_pred ccCcchhhhcccCcccccCHHHhC-cCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhh---cCC--------C
Confidence 321 223345556544 4467889999999999999999999987543322211110 000 1
Q ss_pred ccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 682 PSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 682 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
+.+ .......+.+++.+||+.+|++||++.|++++-
T Consensus 219 ~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06642 219 PTL----EGQYSKPFKEFVEACLNKDPRFRPTAKELLKHK 254 (277)
T ss_pred CCC----CcccCHHHHHHHHHHccCCcccCcCHHHHHHhH
Confidence 111 112234567999999999999999999999853
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=301.03 Aligned_cols=238 Identities=20% Similarity=0.358 Sum_probs=184.5
Q ss_pred CCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEE
Q 004637 454 DPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 454 ~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
.....||+|+||.||++.. .++..||||.+........+.+.+|+.++++++||||+++++++. .++..++
T Consensus 25 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~--------~~~~~~l 96 (292)
T cd06658 25 DSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL--------VGDELWV 96 (292)
T ss_pred hhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhee--------cCCeEEE
Confidence 3346799999999999985 468899999987655445567899999999999999999999875 3456899
Q ss_pred EEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCC
Q 004637 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~ 612 (740)
||||+++++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++....
T Consensus 97 v~e~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (292)
T cd06658 97 VMEFLEGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS 169 (292)
T ss_pred EEeCCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhcc
Confidence 9999999999998842 358899999999999999999999 799999999999999999999999999874321
Q ss_pred ---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCcc
Q 004637 613 ---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683 (740)
Q Consensus 613 ---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
.+...+.+||... ...++.++|||||||++|||++|+.||...........+.. ..+....
T Consensus 170 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~---~~~~~~~------ 239 (292)
T cd06658 170 KEVPKRKSLVGTPYWMAPEVIS-RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD---NLPPRVK------ 239 (292)
T ss_pred cccccCceeecCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---cCCCccc------
Confidence 1223355566543 44578899999999999999999999975443222221111 1110110
Q ss_pred ccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 684 VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 684 l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
. .......+.+++.+||..||++|||++|+++.
T Consensus 240 --~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 240 --D--SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred --c--ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0 00112345689999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=300.22 Aligned_cols=265 Identities=15% Similarity=0.241 Sum_probs=192.5
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ......+.+|++++++++||||++++++|..........
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 45788999999999999999995 468999999987542 222345678999999999999999999886433221223
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
....++||||+.+ +|.+++.. ....+++.++..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSN--KNVKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCC
Confidence 4567999999975 88888753 23468999999999999999999998 699999999999999999999999999
Q ss_pred CCCCCCC-------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCC
Q 004637 607 IPLPSKK-------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673 (740)
Q Consensus 607 la~~~~~-------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 673 (740)
++..... +...+.+||.......++.++||||||+++|||+||+.||...........+.......+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 8853321 122355667665555567899999999999999999999986554433333333222111
Q ss_pred ccccccc------Cc-cccCCC---------cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 674 SKLRAEA------DP-SVRGTY---------AYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 674 ~~~~~~~------~~-~l~~~~---------~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
..+.... +. ...... .......+.+++.+||..||++|||++|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 1110000 00 000000 00012355789999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=297.63 Aligned_cols=256 Identities=19% Similarity=0.247 Sum_probs=186.3
Q ss_pred HhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++++|.+.+.||+|+||.||+|.. .+++.||+|+++.... .....+.+|++++++++|+||+++++++. .
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~--------~ 74 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH--------T 74 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe--------c
Confidence 357899999999999999999985 4688999999975432 23346789999999999999999999874 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
++..++||||+. +++.+++.. ....+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 75 ~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg 148 (291)
T cd07870 75 KETLTFVFEYMH-TDLAQYMIQ--HPGGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFG 148 (291)
T ss_pred CCeEEEEEeccc-CCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccc
Confidence 456899999996 677777643 23457888899999999999999998 699999999999999999999999999
Q ss_pred CCCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhh---hcC--
Q 004637 607 IPLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCL---AEA-- 672 (740)
Q Consensus 607 la~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~---~~~-- 672 (740)
+++.... +...+.+||.......++.++|||||||++|||+||+.||...... .+.+.... ...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~ 226 (291)
T cd07870 149 LARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV--FEQLEKIWTVLGVPTE 226 (291)
T ss_pred cccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH--HHHHHHHHHHcCCCCh
Confidence 8853211 2233556666554455778999999999999999999999754321 11111110 000
Q ss_pred ---------CcccccccCccccCCC-----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 673 ---------PSKLRAEADPSVRGTY-----AYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 673 ---------~~~~~~~~~~~l~~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+............... .......+.+++.+|++.||++|||+.|++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 227 DTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000000000000000 00113456789999999999999999998753
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=299.41 Aligned_cols=258 Identities=19% Similarity=0.269 Sum_probs=191.2
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
++|++.+.||+|+||.||+|+.. +++.||+|.++.... .....+.+|++++++++||||+++++++... ..
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------~~ 78 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS------NL 78 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec------CC
Confidence 56888899999999999999965 588999999975432 2234678899999999999999999988532 23
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
...|+||||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 79 ~~~~lv~e~~~~-~L~~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~ 152 (293)
T cd07843 79 DKIYMVMEYVEH-DLKSLMET--MKQPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGL 152 (293)
T ss_pred CcEEEEehhcCc-CHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCc
Confidence 568999999974 99988864 23368999999999999999999998 7999999999999999999999999998
Q ss_pred CCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCc----
Q 004637 608 PLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPS---- 674 (740)
Q Consensus 608 a~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~---- 674 (740)
+..... +...+.+||.......++.++|||||||++|||++|+.||...........+.........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 153 AREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP 232 (293)
T ss_pred eeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHH
Confidence 754322 1223556666655555688999999999999999999999865433322222111110000
Q ss_pred -----------ccccccCccccCCCcHH-HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 675 -----------KLRAEADPSVRGTYAYD-SLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 675 -----------~~~~~~~~~l~~~~~~~-~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.........+...++.. ....+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000001111111111 24557799999999999999999999864
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=298.73 Aligned_cols=256 Identities=18% Similarity=0.312 Sum_probs=191.1
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
++|++.+.||+|+||.||+|+.. +++.||||.++... ....+.+.+|++++++++|+||+++++++.. +
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------~ 72 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR--------K 72 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE--------C
Confidence 36888999999999999999955 58899999987542 3334678999999999999999999998852 4
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
+..++||||++++.+..+.. ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||.
T Consensus 73 ~~~~iv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~ 146 (288)
T cd07833 73 GRLYLVFEYVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGF 146 (288)
T ss_pred CEEEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeec
Confidence 56899999999877766653 33458999999999999999999998 7999999999999999999999999999
Q ss_pred CCCCCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 608 PLPSKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 608 a~~~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
+...... ...+.+||+......++.++||||||+++|||++|+.||......+............+....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (288)
T cd07833 147 ARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQ 226 (288)
T ss_pred ccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHh
Confidence 7543221 223456666654447789999999999999999999999765433222222221111110000
Q ss_pred ---------------cccCcc-ccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 678 ---------------AEADPS-VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 ---------------~~~~~~-l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
...++. ....++.....++.+++.+||..+|++||+++++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 227 ELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred hhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000000 0001112235678899999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-34 Score=298.84 Aligned_cols=263 Identities=19% Similarity=0.250 Sum_probs=190.0
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||.||+|+. .+++.||+|.++... ......+.+|++++++++ ||||+++++++..... ..
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~---~~ 77 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEK---NG 77 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCC---CC
Confidence 4688899999999999999995 468999999987543 223467889999999995 6999999998753211 12
Q ss_pred CCceEEEEecccCcchhhhcccccC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC-CCceeEe
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKK--KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLS 603 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~-~~~~kl~ 603 (740)
....|+||||+++ +|.+++..... ...+++..+..++.||++||+|||+ .+|+||||||+||+++. ++.+||+
T Consensus 78 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~ 153 (295)
T cd07837 78 KPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIA 153 (295)
T ss_pred CceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEe
Confidence 3447999999985 89888864322 3468999999999999999999998 79999999999999998 8999999
Q ss_pred cCCCCCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCc
Q 004637 604 GYNIPLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPS 674 (740)
Q Consensus 604 DFGla~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 674 (740)
|||++..... +...+.+||+......++.++|||||||++|||++|..||...+.......+.........
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (295)
T cd07837 154 DLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTE 233 (295)
T ss_pred ecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 9998853211 1233566776655566789999999999999999999999765432211111111110000
Q ss_pred ccc----cccC----ccccC----CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 675 KLR----AEAD----PSVRG----TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 675 ~~~----~~~~----~~l~~----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
... ...+ +.... ........++.+++.+||+.||++||++.|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000 0000 00000 0011234567799999999999999999999864
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-34 Score=293.33 Aligned_cols=247 Identities=20% Similarity=0.274 Sum_probs=190.1
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||.|+||.||+|.. .+++.||+|.++... ....+.+.+|++++++++||||+++++++.. ..+.
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~ 74 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID------RSNQ 74 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec------CCCC
Confidence 477889999999999999984 568899999987542 2234568889999999999999999987752 2345
Q ss_pred ceEEEEecccCcchhhhcccc-cCCCCCCHHHHHHHHHHHHHHHHHHHcCC--CCCceecCCCCCceeecCCCceeEecC
Q 004637 529 TVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGV--APGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
..+++|||+++++|.+++... .....+++..++.++.|+++||+|||..+ ..+|+|+||||+||+++.++.+|++||
T Consensus 75 ~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~ 154 (265)
T cd08217 75 TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDF 154 (265)
T ss_pred EEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecc
Confidence 689999999999999999653 22457899999999999999999999221 279999999999999999999999999
Q ss_pred CCCCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 606 NIPLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 606 Gla~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|++..... +...+.+||... ...++.++||||||+++|||++|+.||...+.......+... ..
T Consensus 155 g~~~~~~~~~~~~~~~~~~~~~~~pE~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~--- 227 (265)
T cd08217 155 GLAKILGHDSSFAKTYVGTPYYMSPEQLN-HMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG---KF--- 227 (265)
T ss_pred cccccccCCcccccccccCCCccChhhhc-CCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC---CC---
Confidence 99864322 222344555543 345678999999999999999999999865533322222111 10
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+ ..+......+.+++.+|++.+|++||++.||+++
T Consensus 228 -----~----~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 228 -----R----RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -----C----CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0 1111223466799999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-34 Score=296.95 Aligned_cols=257 Identities=19% Similarity=0.294 Sum_probs=191.4
Q ss_pred CCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
+|++.+.||+|++|.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++. ..+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~~ 72 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIH--------TENK 72 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEe--------eCCc
Confidence 4788999999999999999964 688999999976532 23467788999999999999999999885 3355
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++ +|.+++........+++..+..++.|++.||+|||+ .+++||||||+||++++++.+|++|||++.
T Consensus 73 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 73 LMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred EEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 8999999985 899888654444568999999999999999999998 799999999999999999999999999885
Q ss_pred CCC---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCc-ccc--
Q 004637 610 PSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPS-KLR-- 677 (740)
Q Consensus 610 ~~~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~-~~~-- 677 (740)
... .++..+.+||.......++.++|||||||++|||++|+.||...+..+....+......... .+.
T Consensus 149 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07836 149 AFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGI 228 (284)
T ss_pred hhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHH
Confidence 321 12233555666555556788999999999999999999999865543332222211110000 000
Q ss_pred ---cccCcccc-------CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 678 ---AEADPSVR-------GTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 ---~~~~~~l~-------~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
........ ..........+.+++.+|++.||++||++.|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 229 SQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred hcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000000 00011223467799999999999999999999853
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=307.25 Aligned_cols=260 Identities=15% Similarity=0.257 Sum_probs=191.2
Q ss_pred hcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.++|++.+.||+|+||.||+|+ ..+|+.||||.++... ......+.+|++++++++||||+++++++.... ....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~ 80 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPS---FESF 80 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccc---cccc
Confidence 4689999999999999999998 4568999999986432 233456889999999999999999999875321 1234
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
...++|+||+++ +|.+++. ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~lv~e~~~~-~l~~~~~----~~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 81 NDVYIVQELMET-DLYKLIK----TQHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred ceEEEEehhccc-CHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccc
Confidence 568999999975 8888774 3458999999999999999999999 7999999999999999999999999999
Q ss_pred CCCCCC------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC-Cc
Q 004637 608 PLPSKK------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA-PS 674 (740)
Q Consensus 608 a~~~~~------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~ 674 (740)
+..... ++..+.+||.......++.++|||||||++|||++|+.||...+.......+....... +.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 153 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232 (336)
T ss_pred eeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 853221 22335566665545567889999999999999999999997654322222221111110 00
Q ss_pred ccccccCcc-------c--cCCC-----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 675 KLRAEADPS-------V--RGTY-----AYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 675 ~~~~~~~~~-------l--~~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
......+.. . .... ......++.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 0 0000 01123457799999999999999999999987
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=307.62 Aligned_cols=243 Identities=19% Similarity=0.313 Sum_probs=195.8
Q ss_pred CCCCCCeeecCCCccEEEEEecC-CCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
.|.++..||.|+||.||+|..++ +-..|.|++........+++.-||+||..++||+||++++.|++ .+.+
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~--------enkL 104 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYF--------ENKL 104 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc--------cCce
Confidence 34556789999999999999554 55667788887777777899999999999999999999997753 3458
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC-
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL- 609 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~- 609 (740)
|++.|||.||-...++-+ -...+++.++..+++|++.||.|||+ ..|||||||+.|||++-+|.++|+|||.+.
T Consensus 105 wiliEFC~GGAVDaimlE--L~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAK 179 (1187)
T KOG0579|consen 105 WILIEFCGGGAVDAIMLE--LGRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAK 179 (1187)
T ss_pred EEEEeecCCchHhHHHHH--hccccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeeccccccc
Confidence 999999999999988864 45679999999999999999999999 799999999999999999999999999972
Q ss_pred --------CCCCCCCCccccccccC----CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 610 --------PSKKGLESPLRGQYVSN----QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 610 --------~~~~~~~~~~~~~~~~~----~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
....|++++++|+.+.. ...|++++|||||||+|.||..+.+|...-+...+...+ ...+.| .+
T Consensus 180 n~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKi--aKSePP-TL- 255 (1187)
T KOG0579|consen 180 NKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI--AKSEPP-TL- 255 (1187)
T ss_pred chhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHH--hhcCCC-cc-
Confidence 23457788888876543 356889999999999999999999998765543322222 111111 11
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+. +......+.+++.+|+..||+.||++.+++++
T Consensus 256 --lq-------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 256 --LQ-------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred --cC-------cchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 11 22334567799999999999999999999874
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=290.75 Aligned_cols=242 Identities=22% Similarity=0.380 Sum_probs=185.8
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccccc--ChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|+||.||+|.. .+++.||+|.++..... ..+.+.+|++++++++|+||+++++++. ..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~--------~~~ 72 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV--------HRE 72 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe--------cCC
Confidence 478889999999999999985 46899999999865442 4578899999999999999999999764 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++|+||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+|+|+||||+||++++++.+||+|||.+
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 73 KVYIFMEYCSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred EEEEEEecCCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 68999999999999999953 3457899999999999999999998 79999999999999999999999999987
Q ss_pred CCCCC-------------CCCCccccccccCCC--CCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCC
Q 004637 609 LPSKK-------------GLESPLRGQYVSNQP--GDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673 (740)
Q Consensus 609 ~~~~~-------------~~~~~~~~~~~~~~~--~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 673 (740)
..... +...+.+||...... .++.++||||||+++|||++|+.||............ ... ...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~-~~~-~~~ 224 (264)
T cd06626 147 VKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFH-VGA-GHK 224 (264)
T ss_pred cccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHH-Hhc-CCC
Confidence 54321 122344555544322 3678999999999999999999999754321111111 110 110
Q ss_pred cccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 674 ~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
...... ......+.+++.+||+.+|++||++.|++.
T Consensus 225 ~~~~~~----------~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 225 PPIPDS----------LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCCcc----------cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 011100 011344568999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-34 Score=295.04 Aligned_cols=240 Identities=20% Similarity=0.380 Sum_probs=183.9
Q ss_pred CeeecCCCccEEEEEecC-------CCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 457 NLIGEGSQGQLYKGFLTD-------GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~-------g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+.||+|+||.||+|+..+ ++.||+|.+.... ......+.+|++++++++||||++++++|. ..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 72 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL--------LNE 72 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec--------CCC
Confidence 468999999999998542 2579999886443 233567899999999999999999999875 334
Q ss_pred ceEEEEecccCcchhhhccccc----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC-----c
Q 004637 529 TVFLVLEHISNGSLRDYLTDWK----KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-----T 599 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~-----~ 599 (740)
..++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+ .+++|+||||+||+++.++ .
T Consensus 73 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~ 149 (269)
T cd05044 73 PQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRV 149 (269)
T ss_pred CeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcc
Confidence 5899999999999999996422 22347899999999999999999998 7999999999999999877 8
Q ss_pred eeEecCCCCCCCCC-----------CCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHH
Q 004637 600 AKLSGYNIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLET 667 (740)
Q Consensus 600 ~kl~DFGla~~~~~-----------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~ 667 (740)
+|++|||++..... ....+.+||+.. ...++.++|||||||++|||+| |+.||...........+..
T Consensus 150 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~ 228 (269)
T cd05044 150 VKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLL-DGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA 228 (269)
T ss_pred eEECCcccccccccccccccCcccCCCccccCHHHHc-cCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc
Confidence 99999999853211 112344556543 4567899999999999999998 9999975443332222211
Q ss_pred hhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 668 CLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 668 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
... ...+...+..+.+++.+||..+|++||++.++++.|++
T Consensus 229 ---~~~------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 229 ---GGR------------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ---CCc------------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 000 00111223567799999999999999999999999863
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=314.07 Aligned_cols=249 Identities=19% Similarity=0.267 Sum_probs=182.0
Q ss_pred hcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
..+|.+.+.||+|+||.||+|+.. .++.||||... ...+.+|++++++++|+|||++++++.. ++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~--------~~ 233 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVV--------GG 233 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEE--------CC
Confidence 346899999999999999999954 57899999643 2346789999999999999999998752 35
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+. |+|.+++.. ....++|.+++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 234 ~~~lv~e~~~-~~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla 307 (461)
T PHA03211 234 LTCLVLPKYR-SDLYTYLGA--RLRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAA 307 (461)
T ss_pred EEEEEEEccC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCc
Confidence 5899999995 699888853 23468999999999999999999998 79999999999999999999999999998
Q ss_pred CCCC-----------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCc--------cchhHHHHHHhh
Q 004637 609 LPSK-----------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSE--------VDGLKLQLETCL 669 (740)
Q Consensus 609 ~~~~-----------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~--------~~~~~~~~~~~~ 669 (740)
+... .++..|.+||... ...++.++|||||||++|||++|..|+.... ...+...+....
T Consensus 308 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~-~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~ 386 (461)
T PHA03211 308 CFARGSWSTPFHYGIAGTVDTNAPEVLA-GDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQ 386 (461)
T ss_pred eecccccccccccccCCCcCCcCHHHHc-CCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhc
Confidence 5321 2344566666654 4567899999999999999999886543211 111222222211
Q ss_pred hcCCcccccccC----------------ccc-cCCCc--HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 670 AEAPSKLRAEAD----------------PSV-RGTYA--YDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 670 ~~~~~~~~~~~~----------------~~l-~~~~~--~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.... ....... +.. ...+. ......+.+++.+||+.||++|||+.|++++
T Consensus 387 ~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 387 VHVD-EFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cccc-cCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1000 0000000 000 00000 0112256789999999999999999999975
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-34 Score=304.22 Aligned_cols=262 Identities=13% Similarity=0.231 Sum_probs=193.4
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
.++|++.+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|+.++++++||||+++++++.... ..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~ 79 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG----AD 79 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC----CC
Confidence 36789999999999999999994 469999999987542 233467788999999999999999998775321 24
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
....++||||+. |+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||
T Consensus 80 ~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 80 FKDVYVVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred CceEEEEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccc
Confidence 457899999996 599998853 4458999999999999999999998 799999999999999999999999999
Q ss_pred CCCCCC-------------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCC
Q 004637 607 IPLPSK-------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673 (740)
Q Consensus 607 la~~~~-------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 673 (740)
++.... .+...+.+||.......++.++|||||||++|||++|+.||...+.......+.......+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~ 232 (334)
T cd07855 153 MARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPS 232 (334)
T ss_pred cceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCCh
Confidence 985321 1222345566654445678999999999999999999999976543322222211111111
Q ss_pred cccccc---------cCc-cccCCC-----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 674 SKLRAE---------ADP-SVRGTY-----AYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 674 ~~~~~~---------~~~-~l~~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
...... .+. ...... .......+.+++.+||+.||++||++.|++....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~ 296 (334)
T cd07855 233 EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPF 296 (334)
T ss_pred hHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChh
Confidence 110000 000 000000 1122456789999999999999999999998543
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=294.30 Aligned_cols=240 Identities=20% Similarity=0.367 Sum_probs=187.6
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhcc---CcccceeeceeeeeccCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLR---HRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~---H~nIv~l~g~~~~~~~~~~~~ 526 (740)
.|+..+.||+|+||.||+|+. .+++.||+|.++... ....+++.+|++++++++ |||++++++++. .
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~--------~ 73 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL--------K 73 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee--------e
Confidence 477789999999999999995 578999999987542 334467889999999997 999999999875 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
+...++||||+++++|.++++. ..+++.....++.|+++||.|||+ .+|+||||+|+||++++++.++|+|||
T Consensus 74 ~~~~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 74 GPRLWIIMEYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred CCEEEEEEecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCC
Confidence 4568999999999999999853 368999999999999999999998 799999999999999999999999999
Q ss_pred CCCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 607 IPLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 607 la~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
.+..... +...+.+||+......++.++|||||||++|||++|+.||...........+. ..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~---~~------ 217 (277)
T cd06917 147 VAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP---KS------ 217 (277)
T ss_pred ceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc---cC------
Confidence 8753322 22235566665544556889999999999999999999997543322111110 00
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
..+.+... .....+.+++.+||+.||++||++.|+++.
T Consensus 218 --~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 218 --KPPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred --CCCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 01111111 123456799999999999999999999874
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=295.21 Aligned_cols=254 Identities=18% Similarity=0.283 Sum_probs=187.8
Q ss_pred CCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
|++.+.||+|++|.||+|.. .+|+.||+|++.... ....+.+.+|++++++++|||++++++++. .++.
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~--------~~~~ 72 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH--------SENK 72 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec--------cCCe
Confidence 56789999999999999985 479999999987543 223467889999999999999999999885 3466
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||++ ++|.+++.... ...+++..+..++.|+++||+|||+ .+++||||+|+||+++.++.+||+|||++.
T Consensus 73 ~~iv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 73 LYLVFEFLD-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred EEEEEeccC-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 899999995 69999986422 2468999999999999999999998 799999999999999999999999999985
Q ss_pred CCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcc-----
Q 004637 610 PSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK----- 675 (740)
Q Consensus 610 ~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~----- 675 (740)
.... +...+.+||.......++.++|||||||++|||+||+.||...+.......+..........
T Consensus 148 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (283)
T cd07835 148 AFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGV 227 (283)
T ss_pred ccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhh
Confidence 4321 12335566765555556889999999999999999999997654322111111110000000
Q ss_pred ---------cccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 676 ---------LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 ---------~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
......+.. ..........+.+++.+|++.||++|||++|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 228 TSLPDYKPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhchhhhhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000000 00011122457799999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=304.35 Aligned_cols=244 Identities=21% Similarity=0.306 Sum_probs=199.5
Q ss_pred HhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccC--hhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHL--PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~--~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
....|.+...||+|.|+.|..|+. .++..||||.+++..... .+.+.+|+++|+.++|||||+++.+..
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~-------- 125 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE-------- 125 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee--------
Confidence 456788999999999999999994 468999999998764333 356899999999999999999998774
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
....+|+||||+.+|.+++|+.. .+.........++.|+.+|++|+|+ +.|||||||++|||||.++++||+||
T Consensus 126 t~~~lylV~eya~~ge~~~yl~~---~gr~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDf 199 (596)
T KOG0586|consen 126 TEATLYLVMEYASGGELFDYLVK---HGRMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADF 199 (596)
T ss_pred ecceeEEEEEeccCchhHHHHHh---cccchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeecc
Confidence 45669999999999999999964 4445568888999999999999999 79999999999999999999999999
Q ss_pred CCCCCC--------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 606 NIPLPS--------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 606 Gla~~~--------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
|++... ..+...+.+||.+.+..+.++++|+||+||++|-|+.|.-||++.....+...+.......+..+
T Consensus 200 gfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~m- 278 (596)
T KOG0586|consen 200 GFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYM- 278 (596)
T ss_pred ccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeeccccee-
Confidence 998433 34566677888888888889999999999999999999999998766554443322222111111
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
..+..+++++++..+|.+|++++++.++-.
T Consensus 279 ---------------s~dce~lLrk~lvl~Pskr~~~dqim~~~W 308 (596)
T KOG0586|consen 279 ---------------SCDCEDLLRKFLVLNPSKRGPCDQIMKDRW 308 (596)
T ss_pred ---------------echhHHHHHHhhccCccccCCHHHhhhhcc
Confidence 122348999999999999999999998654
|
|
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=293.66 Aligned_cols=255 Identities=20% Similarity=0.262 Sum_probs=190.8
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
++|+..+.||.|++|.||+|.. .+++.+|+|.+..... .....+.+|++++++++||||++++++|... ..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~~ 74 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE------SSS 74 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc------CCC
Confidence 3677889999999999999996 4588999999875432 3346789999999999999999999988531 345
Q ss_pred ceEEEEecccCcchhhhccccc-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
..++||||+++++|.+++.... ....+++..+..++.|++.||+|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~ 151 (287)
T cd06621 75 SIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGV 151 (287)
T ss_pred eEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccc
Confidence 6899999999999999875322 34568889999999999999999998 7999999999999999999999999999
Q ss_pred CCCCCC-------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCcc--chhHHHHHHhhhcCCccccc
Q 004637 608 PLPSKK-------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEV--DGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 608 a~~~~~-------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 678 (740)
+..... +...+.+||... ...++.++|||||||++|||++|+.||..... ....+...............
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~pE~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd06621 152 SGELVNSLAGTFTGTSFYMAPERIQ-GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKD 230 (287)
T ss_pred cccccccccccccCCccccCHHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhcc
Confidence 753221 223344555443 45678899999999999999999999985522 11111111111101101111
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
... ........+.+++.+||+.+|++|||+.|+++.-
T Consensus 231 ~~~------~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~ 267 (287)
T cd06621 231 EPG------NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHP 267 (287)
T ss_pred CCC------CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCc
Confidence 110 0011235677999999999999999999999854
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-34 Score=298.94 Aligned_cols=236 Identities=20% Similarity=0.356 Sum_probs=184.5
Q ss_pred CCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEE
Q 004637 456 TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~ 534 (740)
...||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++. .++..++||
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~--------~~~~~~iv~ 97 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL--------VGEELWVLM 97 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhee--------eCCeEEEEE
Confidence 45799999999999985 468999999997655555677899999999999999999999875 345689999
Q ss_pred ecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCC--
Q 004637 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK-- 612 (740)
Q Consensus 535 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~-- 612 (740)
||+++++|.+++. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 98 e~~~~~~L~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~ 170 (297)
T cd06659 98 EFLQGGALTDIVS----QTRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD 170 (297)
T ss_pred ecCCCCCHHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhcccc
Confidence 9999999998874 2458899999999999999999998 799999999999999999999999999874321
Q ss_pred -------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCcccc
Q 004637 613 -------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVR 685 (740)
Q Consensus 613 -------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 685 (740)
.+...+.+||+.. ...++.++|||||||++|||++|+.||...........+.. ..+... ..
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~~~-~~------ 239 (297)
T cd06659 171 VPKRKSLVGTPYWMAPEVIS-RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---SPPPKL-KN------ 239 (297)
T ss_pred cccccceecCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---cCCCCc-cc------
Confidence 1233355666554 44578899999999999999999999975443222222111 110000 00
Q ss_pred CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 686 GTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 686 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.......+.+++.+||+.+|++||++.|+++.
T Consensus 240 ---~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 240 ---AHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ---cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00112346689999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=298.97 Aligned_cols=261 Identities=20% Similarity=0.239 Sum_probs=193.1
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
.++|++.+.||+|+||.||+|+. .+|+.||+|.++.... .....+.+|++++++++|+||+++++++... .
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~ 79 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK------H 79 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC------C
Confidence 46789999999999999999995 4689999999975432 2234567899999999999999999987521 2
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
.+..++||||+++ +|.+++.. ....+++.++..++.|+++||+|||+ .+++||||||+||++++++.+||+|||
T Consensus 80 ~~~~~lv~e~~~~-~l~~~l~~--~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 80 LDSIFLVMEYCEQ-DLASLLDN--MPTPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred CCeEEEEEecCCC-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccc
Confidence 3458999999975 88888853 23568999999999999999999999 799999999999999999999999999
Q ss_pred CCCCCCCC---------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 607 IPLPSKKG---------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 607 la~~~~~~---------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
.+...... ...+.+||.......++.++|||||||++|||++|+.||...+.......+............
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 154 LARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIW 233 (309)
T ss_pred eeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence 98543211 222556666555566788999999999999999999999866544433333322211111110
Q ss_pred cccC-------ccccC-CC------cHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 678 AEAD-------PSVRG-TY------AYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 678 ~~~~-------~~l~~-~~------~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
...+ ..+.. .. .......+.+++.+|++.||++|||+.|++++-.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~ 292 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSY 292 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 0000 00000 00 0012345679999999999999999999997543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-34 Score=310.68 Aligned_cols=252 Identities=21% Similarity=0.294 Sum_probs=185.9
Q ss_pred hcCCCCCCeeecCCCccEEEEEec---CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
..+|.+.+.||+|+||.||+|... .+..||+|.+... ....+|++++++++|||||++++++. .
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~--------~ 157 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYR--------W 157 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEe--------e
Confidence 457999999999999999999743 3578999987643 34578999999999999999998774 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
....++||||+. ++|.+++. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 158 ~~~~~lv~e~~~-~~l~~~l~---~~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG 230 (392)
T PHA03207 158 KSTVCMVMPKYK-CDLFTYVD---RSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFG 230 (392)
T ss_pred CCEEEEEehhcC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCc
Confidence 356899999996 58988883 34678999999999999999999998 799999999999999999999999999
Q ss_pred CCCCCC-----------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHH---HHhhhcC
Q 004637 607 IPLPSK-----------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQL---ETCLAEA 672 (740)
Q Consensus 607 la~~~~-----------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~---~~~~~~~ 672 (740)
+++... .++..+.+||... ...++.++|||||||++|||++|+.||.+.........+ .......
T Consensus 231 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~ 309 (392)
T PHA03207 231 AACKLDAHPDTPQCYGWSGTLETNSPELLA-LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVH 309 (392)
T ss_pred cccccCcccccccccccccccCccCHhHhc-CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccC
Confidence 985322 1334455666554 456788999999999999999999999765432211111 1111111
Q ss_pred Ccccccc-----------cCccccCCCc-------HHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 673 PSKLRAE-----------ADPSVRGTYA-------YDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 673 ~~~~~~~-----------~~~~l~~~~~-------~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
+...... .....+..+. ......+.+++.+|+..||++|||+.|++.+-.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 310 PLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred ccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 1000000 0000011000 011235668999999999999999999998754
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=305.87 Aligned_cols=184 Identities=19% Similarity=0.310 Sum_probs=152.2
Q ss_pred HhcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
...+|++.+.||+|+||.||+|+.. +++.||+|+... .....|+.++++++||||+++++++. .+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~ 129 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLV--------SG 129 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEE--------eC
Confidence 3457999999999999999999954 577899997432 23457999999999999999999885 23
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
...++||||+. |+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~ 203 (357)
T PHA03209 130 AITCMVLPHYS-SDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGA 203 (357)
T ss_pred CeeEEEEEccC-CcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCcc
Confidence 45899999995 589888853 34568999999999999999999999 7999999999999999999999999999
Q ss_pred CCCCC--------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCC
Q 004637 608 PLPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVK 653 (740)
Q Consensus 608 a~~~~--------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~ 653 (740)
++... .++..+.+||... ...++.++|||||||++|||+++..|+
T Consensus 204 a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 204 AQFPVVAPAFLGLAGTVETNAPEVLA-RDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccCcccccccccccccCCeecC-CCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 85321 2344456666654 456789999999999999999966554
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=297.38 Aligned_cols=244 Identities=24% Similarity=0.304 Sum_probs=187.2
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
.+.|+..+.||+|+||+||+|+. .+++.||+|.+..... ...+++.+|++++++++||||++++++|.
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-------- 85 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL-------- 85 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE--------
Confidence 35588889999999999999985 4689999999864432 22356889999999999999999999986
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.++..++||||++ |++.+++.. ....+++..+..++.|++.||.|||+ .+|+||||+|+||++++++.+||+||
T Consensus 86 ~~~~~~lv~e~~~-g~l~~~~~~--~~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~df 159 (307)
T cd06607 86 REHTAWLVMEYCL-GSASDILEV--HKKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADF 159 (307)
T ss_pred eCCeEEEEHHhhC-CCHHHHHHH--cccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeec
Confidence 2345899999997 577777643 23468999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCC-----CCCCCcccccccc--CCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 606 NIPLPSK-----KGLESPLRGQYVS--NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 606 Gla~~~~-----~~~~~~~~~~~~~--~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
|++.... .+...+.+||... ....++.++|||||||++|||+||+.||...+.......+. ...+
T Consensus 160 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~---~~~~----- 231 (307)
T cd06607 160 GSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA---QNDS----- 231 (307)
T ss_pred CcceecCCCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHh---cCCC-----
Confidence 9885432 2233455666543 23457889999999999999999999997544322211111 0000
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
+.+. .......+.+++.+||..||++||++.+++.+.
T Consensus 232 ---~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 232 ---PTLS---SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred ---CCCC---chhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 0000 112334678999999999999999999998753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=286.89 Aligned_cols=262 Identities=18% Similarity=0.312 Sum_probs=193.9
Q ss_pred hcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhc--cCcccceeeceeeeeccCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL--RHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l--~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.....+.+.||+|.||+||+|+++ |+.||||++...+ ++.+.+|.+|.+.+ +|+||+.+++.-.. ....-
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~----~~gs~ 281 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNK----DNGSW 281 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhcccc----CCCce
Confidence 345677899999999999999996 8899999997543 46788888888765 99999999875321 11234
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcC-----CCCCceecCCCCCceeecCCCceeE
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG-----VAPGIFGNNLKTENILLDKALTAKL 602 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~iiHrDlKp~NILld~~~~~kl 602 (740)
..+|||.+|-+.|+|+|||. ...++....++++..+|.||++||-+ .++.|.|||||+.|||+.+++.+.|
T Consensus 282 TQLwLvTdYHe~GSL~DyL~----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLN----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred EEEEEeeecccCCcHHHHHh----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 56999999999999999995 35689999999999999999999953 4688999999999999999999999
Q ss_pred ecCCCCCCC-------------CCCCCCccccccccCCCCC-----CCccceehhhHHHHHHHhC----------CCCCC
Q 004637 603 SGYNIPLPS-------------KKGLESPLRGQYVSNQPGD-----GAKEDVYQLGVILLQVITG----------KQVKS 654 (740)
Q Consensus 603 ~DFGla~~~-------------~~~~~~~~~~~~~~~~~~~-----~~ksDVwSfGvil~ElltG----------~~p~~ 654 (740)
+|+|+|... ..|+..|++||.+...-.. -..+||||||.|+||++.. +.||+
T Consensus 358 ADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy 437 (513)
T KOG2052|consen 358 ADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY 437 (513)
T ss_pred eeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence 999998422 2355567777765432211 1358999999999999863 35665
Q ss_pred CCcc-chhHHHHHHhhhcCCcccccccCccccCCC-cHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhccc
Q 004637 655 TSEV-DGLKLQLETCLAEAPSKLRAEADPSVRGTY-AYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQE 729 (740)
Q Consensus 655 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (740)
..-. +.-.+.++... ..+-+.|.+...+ ..+.+..+.++|..||..+|..|-|+--+-+.|.++.+.++
T Consensus 438 d~Vp~DPs~eeMrkVV------Cv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~e 508 (513)
T KOG2052|consen 438 DVVPSDPSFEEMRKVV------CVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSDE 508 (513)
T ss_pred cCCCCCCCHHHHhcce------eecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcChh
Confidence 3211 11111111111 0111122222222 34677889999999999999999999999999988776544
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=291.39 Aligned_cols=246 Identities=18% Similarity=0.296 Sum_probs=186.4
Q ss_pred CCCCCCeeecCCCccEEEEEecC--CCEEEEEEeeccc----------ccChhHHHHHHHHHhh-ccCcccceeeceeee
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLTD--GSRVSVKCLKLKQ----------RHLPQSLMQHVELLSK-LRHRHLVSILGHCIL 518 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~~--g~~vAvK~l~~~~----------~~~~~~~~~Ei~il~~-l~H~nIv~l~g~~~~ 518 (740)
+|++.+.||+|+||.||+|.... ++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++.
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~- 79 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL- 79 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc-
Confidence 47788999999999999999654 6889999886432 1122456778888865 79999999999875
Q ss_pred eccCCCCCCCceEEEEecccCcchhhhcccc-cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC
Q 004637 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (740)
Q Consensus 519 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~ 597 (740)
.++..++||||+++++|.+++... .....+++..++.++.|++.||.|||+. .+++||||||+||+++.+
T Consensus 80 -------~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 80 -------ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGED 150 (269)
T ss_pred -------cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCC
Confidence 345689999999999999988532 2345688999999999999999999963 589999999999999999
Q ss_pred CceeEecCCCCCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhh
Q 004637 598 LTAKLSGYNIPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCL 669 (740)
Q Consensus 598 ~~~kl~DFGla~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~ 669 (740)
+.+||+|||.+..... +...+.+||... ...++.++||||||+++|||++|+.||...........+..
T Consensus 151 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~-~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~-- 227 (269)
T cd08528 151 DKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVK-NEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVE-- 227 (269)
T ss_pred CcEEEecccceeecccccccccccCcccCcChhhhc-CCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhh--
Confidence 9999999999854322 222344555554 34578899999999999999999999975543322222111
Q ss_pred hcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 670 AEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 670 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
.. ...... ......+.+++.+||+.||++||++.|+.++++
T Consensus 228 -~~---~~~~~~--------~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 228 -AV---YEPLPE--------GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -cc---CCcCCc--------ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 10 000000 011245679999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=287.74 Aligned_cols=241 Identities=21% Similarity=0.382 Sum_probs=187.0
Q ss_pred CCCCCeeecCCCccEEEEEecC-----CCEEEEEEeeccccc-ChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGFLTD-----GSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~~-~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
|++.+.||+|+||.||+|+..+ +..||+|+++..... ..+.+.+|++++++++|+||+++++++. .
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~ 72 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCT--------E 72 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEc--------C
Confidence 3567899999999999999643 388999999755432 4568999999999999999999999875 2
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
.+..+++|||+++++|.+++.... ...+++.++..++.|++.||+|||+ .+++||||||+||++++++.+|++|||
T Consensus 73 ~~~~~~i~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg 148 (258)
T smart00219 73 EEPLMIVMEYMEGGDLLDYLRKNR-PKELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFG 148 (258)
T ss_pred CCeeEEEEeccCCCCHHHHHHhhh-hccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccC
Confidence 356899999999999999996422 1128999999999999999999999 799999999999999999999999999
Q ss_pred CCCCCCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcCCcc
Q 004637 607 IPLPSKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 607 la~~~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
++...... ...+.+||.. ....++.++||||+|++++||++ |+.||...........+... ....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~-~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~---~~~~ 224 (258)
T smart00219 149 LSRDLYDDDYYKKKGGKLPIRWMAPESL-KDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKG---YRLP 224 (258)
T ss_pred CceecccccccccccCCCcccccChHHh-ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC---CCCC
Confidence 98543221 1234445544 34567889999999999999999 78888764443333322211 1000
Q ss_pred cccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 676 ~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
. ......++.+++.+|+..||++|||+.|+++.|
T Consensus 225 ~------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 225 K------------PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred C------------CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0 011234577899999999999999999999864
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=288.30 Aligned_cols=241 Identities=18% Similarity=0.324 Sum_probs=186.6
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|+..+.||+|+||.||+|.. .+++.+|||.+.... ....+.+.+|++++++++||||+++++++. .++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~~~ 72 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFL--------EDK 72 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEe--------cCC
Confidence 477889999999999999985 468899999987542 233467899999999999999999998764 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC-CceeEecCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAKLSGYNI 607 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~-~~~kl~DFGl 607 (740)
..++||||+++++|.+++... ....+++..+..++.|+++||+|||+ .+|+||||||+||+++++ +.+|++|||.
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 73 ALMIVMEYAPGGTLAEYIQKR-CNSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred EEEEEEecCCCCCHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 689999999999999999642 23458999999999999999999998 799999999999999854 5689999999
Q ss_pred CCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 608 PLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 608 a~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
+..... +...+.+||... ...++.++||||||+++|||++|+.||...+.......+.. ........
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~- 223 (256)
T cd08220 149 SKILSSKSKAYTVVGTPCYISPELCE-GKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS---GTFAPISD- 223 (256)
T ss_pred ceecCCCccccccccCCcccCchhcc-CCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh---cCCCCCCC-
Confidence 854322 223345555543 34567899999999999999999999976544332222211 11101111
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.....+.+++.+||+.||++|||+.|++++
T Consensus 224 -----------~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 224 -----------RYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred -----------CcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 122346699999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=290.34 Aligned_cols=242 Identities=21% Similarity=0.310 Sum_probs=183.4
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc-----cChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-----~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
.+|++.+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|++++++++||||+++++++...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP----- 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC-----
Confidence 4688899999999999999995 4589999999864321 1234688899999999999999999976421
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
....+++||||+++|+|.+++.. ...+++.....++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|
T Consensus 77 -~~~~~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 77 -MERTLSIFMEHMPGGSIKDQLKS---YGALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred -CCceEEEEEEecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECc
Confidence 23457899999999999999853 3457888899999999999999998 7999999999999999999999999
Q ss_pred CCCCCCCC------------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC
Q 004637 605 YNIPLPSK------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 605 FGla~~~~------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
||++.... .+...+.+||... ...++.++|||||||++|||++|+.||....... .+.......
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~~ 225 (265)
T cd06652 150 FGASKRLQTICLSGTGMKSVTGTPYWMSPEVIS-GEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA---AIFKIATQP 225 (265)
T ss_pred CccccccccccccccccccCCCCccccChhhhc-CCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH---HHHHHhcCC
Confidence 99885321 1222345566544 3457889999999999999999999997542221 111111110
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
. . ...+......+.+++.+|+. +|++||+++|+++.
T Consensus 226 ---~----~----~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 226 ---T----N----PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred ---C----C----CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 0 0 11122233456688889985 99999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=301.85 Aligned_cols=240 Identities=23% Similarity=0.314 Sum_probs=191.6
Q ss_pred CCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccC---hhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHL---PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~---~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
|...+.||.|+||.||-|+ ..+.+.||||++.....+. .+++.+||..|++++|||+|.+.|+|. ...
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL--------re~ 99 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL--------REH 99 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee--------ccc
Confidence 5556889999999999999 5568899999998654332 367899999999999999999999886 234
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..|||||||-| +-.|++.- .+.++.+..+..|+.+++.||+|||+ .+.||||||+.|||+.+.|.+|++|||.|
T Consensus 100 TaWLVMEYClG-SAsDlleV--hkKplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 100 TAWLVMEYCLG-SASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred hHHHHHHHHhc-cHHHHHHH--HhccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccch
Confidence 57999999975 88888853 35678899999999999999999999 79999999999999999999999999987
Q ss_pred CC-----CCCCCCCcccccccc--CCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccC
Q 004637 609 LP-----SKKGLESPLRGQYVS--NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEAD 681 (740)
Q Consensus 609 ~~-----~~~~~~~~~~~~~~~--~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (740)
.. ...|++++++||.+. ..+.|+-|+||||+||+..||.-.++|.-..+... ........+ .
T Consensus 174 si~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS--ALYHIAQNe---------s 242 (948)
T KOG0577|consen 174 SIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYHIAQNE---------S 242 (948)
T ss_pred hhcCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH--HHHHHHhcC---------C
Confidence 43 245788888888754 35678999999999999999999999976444322 222211122 2
Q ss_pred ccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 682 PSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 682 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
|.+. ..+....+..++..|+++-|.+|||.++++..
T Consensus 243 PtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 243 PTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 2222 22334567788999999999999999998864
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=292.44 Aligned_cols=246 Identities=18% Similarity=0.303 Sum_probs=182.7
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc-cChhHHHHHHHH-HhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVEL-LSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~~Ei~i-l~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
++|++.+.||+|+||.||+|+. .+|+.||+|+++.... ....++..|+.+ ++..+||||+++++++. .+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~--------~~ 72 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF--------RE 72 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe--------cC
Confidence 4688899999999999999995 4699999999975432 233456667765 56668999999999885 23
Q ss_pred CceEEEEecccCcchhhhcccc-cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
+..++||||++ |+|.+++... .....+++..+..++.|++.||+|||+. .+++||||||+||+++.++.+||+|||
T Consensus 73 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg 149 (283)
T cd06617 73 GDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFG 149 (283)
T ss_pred CcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecc
Confidence 45899999997 5888887542 2345689999999999999999999982 389999999999999999999999999
Q ss_pred CCCCCC--------CCCCCccccccccC---CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcc
Q 004637 607 IPLPSK--------KGLESPLRGQYVSN---QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 607 la~~~~--------~~~~~~~~~~~~~~---~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
++.... .+...+.+||.... ...++.++|||||||++|||++|+.||..... ....+..........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~ 227 (283)
T cd06617 150 ISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT--PFQQLKQVVEEPSPQ 227 (283)
T ss_pred cccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc--CHHHHHHHHhcCCCC
Confidence 985422 12333556665432 13467899999999999999999999964221 111111111111100
Q ss_pred cccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 ~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.. . ......+.+++.+||..+|++||++.|+++.
T Consensus 228 ~~---~--------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 228 LP---A--------EKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CC---c--------cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0 0123457799999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=299.07 Aligned_cols=243 Identities=22% Similarity=0.306 Sum_probs=187.5
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccccc---ChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|+..+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|++++++++||||+++++++. .
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~ 72 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ--------T 72 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee--------c
Confidence 36888899999999999999965 5899999999754322 3456889999999999999999998874 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
+...++||||+++++|.+++.. .....+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++|+|||
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 73 ETYLCLVMDYCPGGELFRLLQR-QPGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred CCEEEEEEEecCCCCHHHHHHh-CCCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecc
Confidence 4568999999999999999864 234568999999999999999999998 799999999999999999999999999
Q ss_pred CCCCCCC--------------------------------------CCCCccccccccCCCCCCCccceehhhHHHHHHHh
Q 004637 607 IPLPSKK--------------------------------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT 648 (740)
Q Consensus 607 la~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt 648 (740)
++..... ++..+.+||... ...++.++|||||||++|||++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Di~slG~ll~~l~~ 227 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS-GDGHGSAVDWWTLGILLYEMLY 227 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHc-CCCCCchHHHHHHHHHHHHHhh
Confidence 8743211 122244555543 3456789999999999999999
Q ss_pred CCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCC----HHHHHHH
Q 004637 649 GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS----IEDVLWN 720 (740)
Q Consensus 649 G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs----~~evl~~ 720 (740)
|+.||...+.......+. .... .... .......+.+++.+||+.||++||+ ++|++..
T Consensus 228 g~~pf~~~~~~~~~~~~~---~~~~-~~~~----------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 228 GTTPFKGSNRDETFSNIL---KKEV-TFPG----------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred CCCCCCCCchHHHHHHHh---cCCc-cCCC----------ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 999997654432222111 1110 0000 0012356779999999999999999 6666663
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=294.57 Aligned_cols=266 Identities=20% Similarity=0.269 Sum_probs=193.7
Q ss_pred HHhcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeec--cC
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTY--QD 522 (740)
Q Consensus 448 ~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~--~~ 522 (740)
...++|++.+.||+|+||.||+|+.. +|+.||+|.++... ......+.+|++++++++||||+++++++.... ..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35678999999999999999999964 58899999997543 233456788999999999999999999885321 00
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeE
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl 602 (740)
....+...++|+||+++ ++.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES--GLVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEe
Confidence 11123478999999986 77777753 24468999999999999999999999 79999999999999999999999
Q ss_pred ecCCCCCCCCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhc-
Q 004637 603 SGYNIPLPSKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE- 671 (740)
Q Consensus 603 ~DFGla~~~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~- 671 (740)
+|||.+...... ...+.+||.......++.++|||||||++|||++|++||...+.......+......
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSP 237 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 999998643221 122445565544455688999999999999999999999865443333333222111
Q ss_pred CCccccccc--------Cc------cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 672 APSKLRAEA--------DP------SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 672 ~~~~~~~~~--------~~------~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.+....... ++ ..+.. .......+.+++.+||+.||++||++.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred Chhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111111100 00 00000 01124567899999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=294.47 Aligned_cols=239 Identities=20% Similarity=0.291 Sum_probs=187.5
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||.||+++. .+++.||+|.++... ....+.+.+|++++++++||||+++++++. .
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~ 72 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ--------D 72 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE--------c
Confidence 4688899999999999999995 468999999987542 223467889999999999999999999875 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
+...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 73 ~~~~~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 73 DSNLYLVMEYVPGGELFSHLRK---SGRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred CCeEEEEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCC
Confidence 4568999999999999999853 3568999999999999999999999 799999999999999999999999999
Q ss_pred CCCCCCC------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 607 IPLPSKK------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 607 la~~~~~------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
++..... +...+.+||... ...++.++||||||+++|||++|+.||...+.......+.. ....+....
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~ 221 (290)
T cd05580 147 FAKRVKGRTYTLCGTPEYLAPEIIL-SKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE----GKVRFPSFF 221 (290)
T ss_pred CccccCCCCCCCCCCccccChhhhc-CCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc----CCccCCccC
Confidence 9864322 223355666554 34567899999999999999999999976553222222211 110111111
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 720 (740)
...+.+++.+||..||++|| +++|+++.
T Consensus 222 ------------~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 222 ------------SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred ------------CHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 23456899999999999999 77777653
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=297.64 Aligned_cols=264 Identities=16% Similarity=0.266 Sum_probs=192.6
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .....+.+|++++++++||||+++++++..........
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 47899999999999999999995 4689999999875432 22356789999999999999999999876443322234
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
....++||||+.+ ++.+.+.. ....+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCc
Confidence 5678999999975 77777653 34468999999999999999999998 799999999999999999999999999
Q ss_pred CCCCCCCC--------------------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHH
Q 004637 607 IPLPSKKG--------------------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLE 666 (740)
Q Consensus 607 la~~~~~~--------------------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~ 666 (740)
+++..... ...+.+||.......++.++|||||||++|||++|++||...........+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 98533211 1224556655544567889999999999999999999998655433222222
Q ss_pred HhhhcC-Ccc------ccccc--------CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 667 TCLAEA-PSK------LRAEA--------DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 667 ~~~~~~-~~~------~~~~~--------~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
...... +.. ..... .+.+...+ ......+.+++.+|++.||++|||+.|++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERF-GKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHc-ccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 111110 000 00000 00000000 1112457799999999999999999999863
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=307.16 Aligned_cols=239 Identities=22% Similarity=0.364 Sum_probs=190.8
Q ss_pred CCeeecCCCccEEEEEec-CCCEEEEEEeecc----cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 456 TNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK----QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~----~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
..+||+|+|-+||||... +|..||--.++.. .....++|..|+.+|+.|+|||||++|.+|.+. .....
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~------~n~~i 118 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT------DNKTI 118 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC------CCcee
Confidence 568999999999999954 5778876555432 223347899999999999999999999998743 33668
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC-CCceeEecCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLSGYNIPL 609 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~-~~~~kl~DFGla~ 609 (740)
-+|+|.|..|+|..|++ +.+.++.+.++.+++||++||.|||+. .++|||||||.+||+|+. .|.+||+|.|+|.
T Consensus 119 n~iTEL~TSGtLr~Y~k---k~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAt 194 (632)
T KOG0584|consen 119 NFITELFTSGTLREYRK---KHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLAT 194 (632)
T ss_pred eeeeecccCCcHHHHHH---HhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHH
Confidence 89999999999999995 455678889999999999999999985 579999999999999985 5899999999984
Q ss_pred CC-------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCc-cchhHHHHHHhhhcCCcccccccC
Q 004637 610 PS-------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSE-VDGLKLQLETCLAEAPSKLRAEAD 681 (740)
Q Consensus 610 ~~-------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 681 (740)
.. -.|++.+++||.+ ...|.+.+||||||+.|+||+|+..||.... ..++.+.+.. ...|..+..+-|
T Consensus 195 l~r~s~aksvIGTPEFMAPEmY--EE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S--GiKP~sl~kV~d 270 (632)
T KOG0584|consen 195 LLRKSHAKSVIGTPEFMAPEMY--EENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS--GIKPAALSKVKD 270 (632)
T ss_pred HhhccccceeccCccccChHHH--hhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc--CCCHHHhhccCC
Confidence 32 2466777777764 3678999999999999999999999998543 2333333222 223445556666
Q ss_pred ccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 682 PSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 682 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
|.++ ++|.+|+.. .++|||+.|+|.+-
T Consensus 271 Pevr------------~fIekCl~~-~~~R~sa~eLL~d~ 297 (632)
T KOG0584|consen 271 PEVR------------EFIEKCLAT-KSERLSAKELLKDP 297 (632)
T ss_pred HHHH------------HHHHHHhcC-chhccCHHHHhhCh
Confidence 6554 999999999 99999999999753
|
|
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-33 Score=288.60 Aligned_cols=243 Identities=17% Similarity=0.302 Sum_probs=186.3
Q ss_pred CCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccc------cChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR------HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~------~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
+|+..+.||+|+||.||+|+ ..+++.||+|.++.... ...+.+.+|++++++++|+||+++++++.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------- 73 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC------- 73 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-------
Confidence 47788999999999999998 46789999999874331 12467889999999999999999999874
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC-ceeEe
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLS 603 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~-~~kl~ 603 (740)
.++..++||||+++++|.+++.+ ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++ .+||+
T Consensus 74 -~~~~~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 74 -EDSHFNLFVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred -cCCeEEEEEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEc
Confidence 34568999999999999999953 4468899999999999999999999 7999999999999998776 69999
Q ss_pred cCCCCCCCCC-------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhh
Q 004637 604 GYNIPLPSKK-------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 604 DFGla~~~~~-------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 670 (740)
|||.+..... ++..+.+||... ...++.++||||+|+++|||++|+.||...........+.....
T Consensus 147 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~ 225 (268)
T cd06630 147 DFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLR-GEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS 225 (268)
T ss_pred ccccccccccccccCCccccccccccceeCHhHhc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc
Confidence 9999753321 122344555543 45678899999999999999999999975433222222211111
Q ss_pred cCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 671 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.. . . ...+......+.+++.+|++.+|++||++.|+++.
T Consensus 226 ~~---~----~----~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 226 AT---T----A----PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred cC---C----C----CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 00 0 0 11122233456789999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=291.41 Aligned_cols=238 Identities=21% Similarity=0.360 Sum_probs=185.6
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
-|++.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++. .+..
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------~~~~ 76 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL--------KDTK 76 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE--------eCCe
Confidence 366788999999999999985 468899999986443 233457889999999999999999999885 3456
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++|+|.+++.. ..+++..+..++.|++.|+.|||+ .+++|+||||+||+++.++.++++|||++.
T Consensus 77 ~~lv~e~~~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 77 LWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred EEEEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccce
Confidence 8999999999999999852 458899999999999999999998 799999999999999999999999999875
Q ss_pred CCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 610 PSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 610 ~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
.... +...+.+||... ....+.++|||||||++|||++|+.||...........+. ...+..+
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~---- 221 (277)
T cd06641 150 QLTDTQIKRNTFVGTPFWMAPEVIK-QSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP---KNNPPTL---- 221 (277)
T ss_pred ecccchhhhccccCCccccChhhhc-cCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh---cCCCCCC----
Confidence 3221 222344555543 3456789999999999999999999997544322222111 1111111
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.......+.+++.+||+.+|++||++.+++++
T Consensus 222 --------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 222 --------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred --------CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11123456689999999999999999999985
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=292.91 Aligned_cols=256 Identities=21% Similarity=0.313 Sum_probs=190.5
Q ss_pred CCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 453 FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++|||++++++++... ..+.
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~~ 74 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK------GKGS 74 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC------CCCc
Confidence 567889999999999999955 58899999998653 33446788999999999999999999988521 1356
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++ +|.+++.. ....+++..+..++.|+++||+|||+ .+++|+||||+||++++++.+||+|||.+.
T Consensus 75 ~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 75 IYMVFEYMDH-DLTGLLDS--PEVKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred EEEEeccccc-cHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEcccccee
Confidence 8999999985 89888853 22468999999999999999999998 799999999999999999999999999885
Q ss_pred CCCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC-Cccccc
Q 004637 610 PSKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA-PSKLRA 678 (740)
Q Consensus 610 ~~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~ 678 (740)
..... ...+.+||.......++.++||||||+++|||+||+.||...........+....... +.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd07840 149 PYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPG 228 (287)
T ss_pred eccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccc
Confidence 43221 2224556655544567889999999999999999999998655433333222211111 000000
Q ss_pred cc--------------CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 679 EA--------------DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 679 ~~--------------~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.. ...+.......+...+.+++.+||..+|++||++.++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 229 VSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred cccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00 0000000111124567899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=291.34 Aligned_cols=237 Identities=17% Similarity=0.225 Sum_probs=176.7
Q ss_pred eeecCCCccEEEEEe-cCCCEEEEEEeecccc---cChhHHHHHHHHHhh---ccCcccceeeceeeeeccCCCCCCCce
Q 004637 458 LIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSK---LRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 458 ~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~---l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
.||+|+||.||+++. .+++.||+|.+..... .....+.+|..+++. .+||||+.+++++. .++..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~~~ 72 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH--------TPDKL 72 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe--------cCCeE
Confidence 489999999999995 4689999999875432 112334455544443 47999999988774 33568
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+|++|||++..
T Consensus 73 ~lv~e~~~~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 73 CFILDLMNGGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 999999999999999853 4568999999999999999999999 7999999999999999999999999999853
Q ss_pred CC-------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCcc
Q 004637 611 SK-------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683 (740)
Q Consensus 611 ~~-------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
.. .++..+.+||.......++.++|||||||++|||++|+.||.......... +..........+
T Consensus 147 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~------- 218 (279)
T cd05633 147 FSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTVNVEL------- 218 (279)
T ss_pred ccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHHHhhcCCcCC-------
Confidence 22 234445566665444567889999999999999999999997543322221 111111111111
Q ss_pred ccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHHh
Q 004637 684 VRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWNL 721 (740)
Q Consensus 684 l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~L 721 (740)
+......+.+++.+|+..||++|| +++|++++.
T Consensus 219 -----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~ 256 (279)
T cd05633 219 -----PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV 256 (279)
T ss_pred -----ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence 111224566899999999999999 699998753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=294.69 Aligned_cols=241 Identities=21% Similarity=0.376 Sum_probs=188.0
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
++|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.++++++||||+++++++. .++.
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~--------~~~~ 90 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL--------VGDE 90 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheee--------eCCc
Confidence 6788899999999999999984 468899999987655555577899999999999999999999885 2345
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++|+||+++|+|.+++.+ ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 91 ~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~ 163 (293)
T cd06647 91 LWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (293)
T ss_pred EEEEEecCCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCccee
Confidence 8999999999999999853 347899999999999999999998 799999999999999999999999999874
Q ss_pred CCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 610 PSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 610 ~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
.... +...+.+||... ...++.++|||||||++||+++|+.||...........+.. ...+
T Consensus 164 ~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~--~~~~------- 233 (293)
T cd06647 164 QITPEQSKRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT--NGTP------- 233 (293)
T ss_pred cccccccccccccCChhhcCchhhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc--CCCC-------
Confidence 3221 222245555543 34568899999999999999999999975433221111100 0000
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.. .........+.+++.+||+.+|++||++.|++.+
T Consensus 234 --~~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 234 --EL--QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred --CC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0111223456689999999999999999999976
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=290.30 Aligned_cols=246 Identities=21% Similarity=0.342 Sum_probs=190.1
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
++|+..+.||+|+||.||+|... +++.||+|.+.... ....+++.+|++++++++||||+++++++. .+.
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~~~ 72 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY--------NNG 72 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeee--------cCC
Confidence 35777889999999999999965 68999999987653 234467899999999999999999999875 335
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++|+||+++++|.+++... ...+++..+..++.|+++||+|||+. .+++||||||+||++++++.+||+|||.+
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~ 148 (265)
T cd06605 73 DISICMEYMDGGSLDKILKEV--QGRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVS 148 (265)
T ss_pred EEEEEEEecCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 689999999999999999642 25688999999999999999999982 59999999999999999999999999987
Q ss_pred CCC-------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCcc--chhHHHHHHhhhcCCcccccc
Q 004637 609 LPS-------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEV--DGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~-------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 679 (740)
... ..+...+.+||+.. ...++.++||||||+++|||++|+.||..... ......+.......+...
T Consensus 149 ~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 224 (265)
T cd06605 149 GQLVNSLAKTFVGTSSYMAPERIQ-GNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRL--- 224 (265)
T ss_pred hhhHHHHhhcccCChhccCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCC---
Confidence 532 22333455666654 44678899999999999999999999975421 122222222211111011
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.. ......+.+++.+||..||++|||+.|++.+
T Consensus 225 -----~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 225 -----PS---GKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred -----Ch---hhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 00 0123456799999999999999999999865
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=302.40 Aligned_cols=271 Identities=16% Similarity=0.225 Sum_probs=197.4
Q ss_pred CCHHHHHHHhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceee
Q 004637 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCI 517 (740)
Q Consensus 441 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~ 517 (740)
....++...+++|++.+.||+|+||.||+|. ..+++.||+|+++... ....+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 3455677788999999999999999999998 4578999999987532 222456888999999999999999999875
Q ss_pred eeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC
Q 004637 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (740)
Q Consensus 518 ~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~ 597 (740)
... ........++++|++ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+||+++++
T Consensus 87 ~~~--~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~ 156 (345)
T cd07877 87 PAR--SLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 156 (345)
T ss_pred ecc--cccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCC
Confidence 321 112334578888887 6799888742 358999999999999999999998 799999999999999999
Q ss_pred CceeEecCCCCCCCCCC------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhc
Q 004637 598 LTAKLSGYNIPLPSKKG------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE 671 (740)
Q Consensus 598 ~~~kl~DFGla~~~~~~------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~ 671 (740)
+.+||+|||+++..... +..+.+||.......++.++|||||||++|||++|+.||...+.......+......
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (345)
T cd07877 157 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 236 (345)
T ss_pred CCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 99999999998654322 233556665544456788999999999999999999999755433322222211111
Q ss_pred CCcccccccCcc-----------ccC-CC---cHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 672 APSKLRAEADPS-----------VRG-TY---AYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 672 ~~~~~~~~~~~~-----------l~~-~~---~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.+.......... ... .+ .......+.+++.+|++.||++||++.|++.+-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 237 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred CCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 111111000000 000 00 001234567999999999999999999999764
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=286.61 Aligned_cols=244 Identities=21% Similarity=0.340 Sum_probs=190.7
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||+|++|.||+|+.. +++.||||++..... ...+.+.+|++++++++|+||+++++++. .+.
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~ 72 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY--------KEG 72 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc--------cCC
Confidence 36888999999999999999965 599999999876543 34578999999999999999999999875 335
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++++|.+++.. ...+++..+..++.|+++|++|||+. .+++||||+|+||+++.++.++|+|||.+
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~ 147 (264)
T cd06623 73 EISIVLEYMDGGSLADLLKK---VGKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGIS 147 (264)
T ss_pred eEEEEEEecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccc
Confidence 68999999999999999953 36689999999999999999999972 59999999999999999999999999988
Q ss_pred CCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 609 LPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
..... +...+.+||... ...++.++||||||+++|||+||+.||....................
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~~pE~~~-~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~------ 220 (264)
T cd06623 148 KVLENTLDQCNTFVGTVTYMSPERIQ-GESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP------ 220 (264)
T ss_pred eecccCCCcccceeecccccCHhhhC-CCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCC------
Confidence 54322 122344555543 44678899999999999999999999976532122222221111111
Q ss_pred cCccccCCCcHH-HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 680 ADPSVRGTYAYD-SLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~-~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+.. +.. ....+.+++.+||..+|++||++.|++++
T Consensus 221 --~~~----~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 --PSL----PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --CCC----CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 011 111 23466799999999999999999999975
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=290.70 Aligned_cols=236 Identities=21% Similarity=0.240 Sum_probs=178.5
Q ss_pred eecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEE
Q 004637 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (740)
Q Consensus 459 iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~ 534 (740)
||+|+||+||+|.. .+|+.||+|.+.... ....+.+.+|++++++++||||+++++++. ..+..|+||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~~~lv~ 72 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFE--------TKDDLCLVM 72 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEe--------cCCeEEEEE
Confidence 68999999999984 468999999987532 223456778999999999999999998774 345689999
Q ss_pred ecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCC--
Q 004637 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK-- 612 (740)
Q Consensus 535 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~-- 612 (740)
||+++++|.+++.... ...+++..+..++.|+++||.|||+ .+++||||||+||++++++.+||+|||.+....
T Consensus 73 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 73 TLMNGGDLKYHIYNVG-EPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred ecCCCCcHHHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 9999999999986422 2468999999999999999999998 799999999999999999999999999875332
Q ss_pred ------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccC
Q 004637 613 ------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRG 686 (740)
Q Consensus 613 ------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 686 (740)
.+...+.+||... ...++.++|||||||++|||++|+.||...........+.......+.....
T Consensus 149 ~~~~~~~~~~~y~~PE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 219 (277)
T cd05577 149 KKIKGRAGTPGYMAPEVLQ-GEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPD-------- 219 (277)
T ss_pred CccccccCCCCcCCHHHhc-CCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCc--------
Confidence 1223345556544 3447889999999999999999999997654322222221111111111111
Q ss_pred CCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHH
Q 004637 687 TYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLW 719 (740)
Q Consensus 687 ~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~ 719 (740)
.....+.+++.+||+.||++|| ++.+++.
T Consensus 220 ----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 220 ----KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ----cCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 1123456999999999999999 6666664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=291.21 Aligned_cols=239 Identities=21% Similarity=0.365 Sum_probs=186.1
Q ss_pred CCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
|...+.||+|++|.||+|.. .+++.||+|+++.......+.+.+|+.++++++||||+++++++. .++..+
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~--------~~~~~~ 92 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL--------VGDELW 92 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE--------cCCeEE
Confidence 44457999999999999984 568899999987655444567899999999999999999999875 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+|+||+++++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|++|||.+...
T Consensus 93 ~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~ 165 (285)
T cd06648 93 VVMEFLEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQV 165 (285)
T ss_pred EEEeccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhh
Confidence 99999999999999853 458899999999999999999998 79999999999999999999999999987432
Q ss_pred C---------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 612 K---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 612 ~---------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
. .+...+.+||... ...++.++|||||||++|||++|+.||...+.......+. ...+.....
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~---~~~~~~~~~---- 237 (285)
T cd06648 166 SKEVPRRKSLVGTPYWMAPEVIS-RLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIR---DNLPPKLKN---- 237 (285)
T ss_pred ccCCcccccccCCccccCHHHhc-CCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHH---hcCCCCCcc----
Confidence 1 1233355555543 4457889999999999999999999997544322222221 111111110
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.......+.+++.+||+.+|++||++.|+++.
T Consensus 238 ------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 238 ------LHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred ------cccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 00122456799999999999999999999963
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=300.47 Aligned_cols=266 Identities=15% Similarity=0.246 Sum_probs=191.0
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
.++|.+.+.||+|+||.||+|+. .+|+.||||+++... ......+.+|++++++++||||+++++++.... ....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~~ 91 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAV--SGDE 91 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccc--cCCC
Confidence 37899999999999999999994 568999999987432 223456889999999999999999999875321 1123
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
....++|+||+.. +|.++. ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 92 ~~~~~lv~e~~~~-~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg 162 (342)
T cd07879 92 FQDFYLVMPYMQT-DLQKIM-----GHPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFG 162 (342)
T ss_pred CceEEEEeccccc-CHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCC
Confidence 3457999999974 777665 2358899999999999999999998 799999999999999999999999999
Q ss_pred CCCCCCCC------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 607 IPLPSKKG------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 607 la~~~~~~------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
+++..... +..+.+||.......++.++|||||||++|||++|+.||...+.......+............+..
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T cd07879 163 LARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKL 242 (342)
T ss_pred CCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 98654322 223456666544445788999999999999999999999865432222221111110000000000
Q ss_pred C-----------ccc-cCCC---cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH--hhhhhh
Q 004637 681 D-----------PSV-RGTY---AYDSLRTTVEITINCLSKDAAKRPSIEDVLWN--LQYSIQ 726 (740)
Q Consensus 681 ~-----------~~l-~~~~---~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~~ 726 (740)
. +.. .... .......+.+++.+||+.||++||+++|++.. ++...+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 243 EDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred cccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 0 000 0000 00122456799999999999999999999965 555443
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=293.26 Aligned_cols=248 Identities=21% Similarity=0.305 Sum_probs=184.0
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|+..+.||+|+||.||+++. .+++.||+|.+.... ......+.+|+.++.++. ||||+++++++. .+.
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~--------~~~ 76 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF--------REG 76 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe--------cCC
Confidence 344567899999999999994 468999999987543 233457889999999996 999999999875 234
Q ss_pred ceEEEEecccCcchhhhccc--ccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 529 TVFLVLEHISNGSLRDYLTD--WKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
..+++|||+.. ++.++... ......+++.....++.|+++||+|||+. .+|+||||||+||+++.++.+||+|||
T Consensus 77 ~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg 153 (288)
T cd06616 77 DCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFG 153 (288)
T ss_pred cEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecc
Confidence 57999999864 55544321 01235689999999999999999999973 589999999999999999999999999
Q ss_pred CCCCCC--------CCCCCccccccccCC--CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 607 IPLPSK--------KGLESPLRGQYVSNQ--PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 607 la~~~~--------~~~~~~~~~~~~~~~--~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
++.... .+...+.+||..... ..++.++|||||||++|||++|+.||.... .....+.......+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~--- 228 (288)
T cd06616 154 ISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVKGDP--- 228 (288)
T ss_pred hhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcCCCC---
Confidence 974321 233445667765544 367889999999999999999999997543 12222222111111
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+.+..........++.+++.+||+.||++|||++||++.
T Consensus 229 -----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 229 -----PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -----CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111112234567799999999999999999999875
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=301.19 Aligned_cols=260 Identities=16% Similarity=0.234 Sum_probs=192.0
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecc--cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
.++|.+.+.||+|+||+||+|+. .+++.||||.++.. .......+.+|+.++++++||||+++++++..... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~---~~ 80 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR---EA 80 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccc---cc
Confidence 35788999999999999999994 56899999998753 22334567889999999999999999998753211 12
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
....++||||+. ++|.+++. ....+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~L~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 81 FNDVYIVYELMD-TDLHQIIR---SSQTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred cCcEEEEEeCCC-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCc
Confidence 345899999996 68988885 34568999999999999999999998 799999999999999999999999999
Q ss_pred CCCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCC-ccc
Q 004637 607 IPLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP-SKL 676 (740)
Q Consensus 607 la~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~ 676 (740)
+++.... ++..+.+||.......++.++|||||||++|||++|+.||...+.......+.......+ ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07858 154 LARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDL 233 (337)
T ss_pred cccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHh
Confidence 9864322 223345666555444578899999999999999999999976543222222221111110 000
Q ss_pred cccc---------------CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 677 RAEA---------------DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 677 ~~~~---------------~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.... ++.... ...+....+.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 234 GFIRNEKARRYIRSLPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hhcCchhhhHHHHhcCcccccCHHH-HcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000 000000 011234567899999999999999999999987
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=298.30 Aligned_cols=254 Identities=21% Similarity=0.272 Sum_probs=183.6
Q ss_pred CeeecC--CCccEEEEEe-cCCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEG--SQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G--~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
..||+| +||+||+|+. .+|+.||+|++..... ...+.+.+|+.+++.++||||++++++|. .++..+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~--------~~~~~~ 75 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT--------TGSWLW 75 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe--------cCCceE
Confidence 356666 9999999995 5799999999875432 22367889999999999999999999885 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+.+|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|++||+.+...
T Consensus 76 ~v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 76 VISPFMAYGSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSL 151 (328)
T ss_pred EEEecccCCCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence 9999999999999986532 3358899999999999999999998 79999999999999999999999999753111
Q ss_pred C----------------CCCCCccccccccCC-CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCc
Q 004637 612 K----------------KGLESPLRGQYVSNQ-PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPS 674 (740)
Q Consensus 612 ~----------------~~~~~~~~~~~~~~~-~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 674 (740)
. .+...+++||+.... ..++.++|||||||++|||++|+.||...................+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd08226 152 VRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPL 231 (328)
T ss_pred hccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCc
Confidence 0 011225566665433 34678999999999999999999999754322211111000000000
Q ss_pred c---------------------cc----------cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 675 K---------------------LR----------AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 675 ~---------------------~~----------~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
. +. ...+..+...........+.+++.+||+.||++|||+.|++++--
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 232 DITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred cccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 0 00 000111111223345567889999999999999999999987543
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=297.97 Aligned_cols=241 Identities=24% Similarity=0.330 Sum_probs=183.6
Q ss_pred cCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecc--cccChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
..|++.+.||+||.+.||++...+.+.+|+|++... +......|.+|+..|.+++ |.+||++++|-. .+
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv--------~d 432 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV--------TD 432 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec--------cC
Confidence 447888999999999999999988899999988644 3445678999999999995 999999998764 46
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCC-HHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLK-WPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~-~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
+.+||||||=+- +|..+|+. +....+ | .++.|..|++.++.++|. .||||.||||.|+|+- .|.+||+|||
T Consensus 433 ~~lYmvmE~Gd~-DL~kiL~k--~~~~~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlV-kG~LKLIDFG 504 (677)
T KOG0596|consen 433 GYLYMVMECGDI-DLNKILKK--KKSIDPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLV-KGRLKLIDFG 504 (677)
T ss_pred ceEEEEeecccc-cHHHHHHh--ccCCCchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEE-eeeEEeeeec
Confidence 779999999764 99999974 233333 4 788999999999999999 6999999999999985 4789999999
Q ss_pred CCCC-----------CCCCCCCccccccccCC----------CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHH
Q 004637 607 IPLP-----------SKKGLESPLRGQYVSNQ----------PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQL 665 (740)
Q Consensus 607 la~~-----------~~~~~~~~~~~~~~~~~----------~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~ 665 (740)
+|.. ...|+..|+.||.+... -..+.++||||+|||||+|+.|++||.... ..+
T Consensus 505 IA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-----n~~ 579 (677)
T KOG0596|consen 505 IANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-----NQI 579 (677)
T ss_pred hhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-----HHH
Confidence 9843 33466667777654321 124689999999999999999999997321 111
Q ss_pred HHhhhcCCcccccccCccccCCCcHH-HHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 666 ETCLAEAPSKLRAEADPSVRGTYAYD-SLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
. ++..+.+|.-.-.|+.. ...++++++..||++||++||++.|+++.
T Consensus 580 a--------Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 580 A--------KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred H--------HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 1 11222222111111110 01127799999999999999999999974
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-33 Score=294.32 Aligned_cols=244 Identities=22% Similarity=0.306 Sum_probs=186.8
Q ss_pred CCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
|+..+.||+|+||.||+|+. .++..||+|++..... ...+.+.+|++++++++|||++++++++. .+.
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------~~~ 98 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL--------REH 98 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe--------eCC
Confidence 66778999999999999995 4688999999875422 22356889999999999999999999885 234
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||++ |+|.+++.. ....+++.++..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~lv~e~~~-g~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~ 172 (317)
T cd06635 99 TAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSA 172 (317)
T ss_pred eEEEEEeCCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCc
Confidence 5899999997 488777753 34568999999999999999999998 79999999999999999999999999987
Q ss_pred CCCCC-----CCCCcccccccc--CCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccC
Q 004637 609 LPSKK-----GLESPLRGQYVS--NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEAD 681 (740)
Q Consensus 609 ~~~~~-----~~~~~~~~~~~~--~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (740)
..... +...+.+||+.. ....++.++|||||||++|||++|+.||...........+... ..+...
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~--~~~~~~----- 245 (317)
T cd06635 173 SIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPTLQ----- 245 (317)
T ss_pred cccCCcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc--cCCCCC-----
Confidence 54332 233455666653 2345788999999999999999999998754332222211111 110000
Q ss_pred ccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 682 PSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 682 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
.......+.+++.+||+.+|++||++.|+++.+...
T Consensus 246 -------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 246 -------SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred -------CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence 111224567999999999999999999999876543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=287.82 Aligned_cols=239 Identities=20% Similarity=0.272 Sum_probs=186.5
Q ss_pred CCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
+|++.+.||.|+||.||+|+.. +++.||+|.+..... ...+.+.+|++++++++||||+++++++. .+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~ 72 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ--------DE 72 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc--------CC
Confidence 4778899999999999999965 589999999975432 33568899999999999999999998763 45
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
...++|+||+++++|.+++.. ...+++..+..++.|+++||.|||+ .+++|+||||+||++++++.++|+|||.
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 73 ENMYLVVDLLLGGDLRYHLSQ---KVKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred CeEEEEEeCCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 669999999999999999953 3578999999999999999999998 7999999999999999999999999998
Q ss_pred CCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 608 PLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 608 a~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
+..... +...+.+||... ...++.++||||||+++|+|++|+.||.............. ......
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~----- 219 (258)
T cd05578 147 ATKVTPDTLTTSTSGTPGYMAPEVLC-RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK-QETADV----- 219 (258)
T ss_pred ccccCCCccccccCCChhhcCHHHHc-ccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH-hccccc-----
Confidence 754322 222344555543 34478899999999999999999999986553211111111 110100
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCH--HHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSI--EDVL 718 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~--~evl 718 (740)
..+......+.+++.+||+.||++||++ +|++
T Consensus 220 -------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 220 -------LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -------cCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0111123566799999999999999999 6655
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=303.02 Aligned_cols=269 Identities=20% Similarity=0.244 Sum_probs=197.2
Q ss_pred CCCCeeecCCCccEEEEE-ecCCCEEEEEEeecc-cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 454 DPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 454 ~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~-~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
...+.||+|+||.||+|+ ..+|+.||||.++.. .....+...+|+++|++++|||||+++++-..... ........
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~--~~~~~~~v 93 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFL--GLVTRLPV 93 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCcccc--Ccccccce
Confidence 345789999999999999 667999999999864 34455778899999999999999999985321110 01145678
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeec--CCC--ceeEecCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD--KAL--TAKLSGYNI 607 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld--~~~--~~kl~DFGl 607 (740)
+|||||.+|||+..|.+..+...+++.+.+.+..+++.||.|||+ .+|+||||||.||++- .+| .-||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 999999999999999877777789999999999999999999998 6999999999999983 334 479999999
Q ss_pred CCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccc-hhHHHHHHhhhcCCccccc
Q 004637 608 PLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVD-GLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 608 a~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~ 678 (740)
|+..+. |+..|.+|+.+.....|+..+|.|||||++||.+||..||...... ...+.+.......|..+.-
T Consensus 171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i 250 (732)
T KOG4250|consen 171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAI 250 (732)
T ss_pred cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence 986544 4556677766554678899999999999999999999999754322 1222222222223322222
Q ss_pred ccCccccCC------------CcHHHHHHHHHHHHhccccCCCCCC--CHHHHHHHhhhhhhc
Q 004637 679 EADPSVRGT------------YAYDSLRTTVEITINCLSKDAAKRP--SIEDVLWNLQYSIQV 727 (740)
Q Consensus 679 ~~~~~l~~~------------~~~~~~~~~~~li~~cl~~dP~~RP--s~~evl~~L~~~~~~ 727 (740)
..++...+. ........+-..+..++..+|++|- ...+....+..+++.
T Consensus 251 ~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 251 GAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred eeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 222111110 1112233455667778888999998 777777777766553
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=297.48 Aligned_cols=259 Identities=18% Similarity=0.236 Sum_probs=187.6
Q ss_pred CCCCCCeeecCCCccEEEEEec---CCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
+|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH------ 74 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC------
Confidence 4778899999999999999954 47899999998633 34456788999999999999999999988531
Q ss_pred CCCceEEEEecccCcchhhhcccccC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC----CCc
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKK--KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK----ALT 599 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~----~~~ 599 (740)
.+...++||||+++ ++.+++..... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.
T Consensus 75 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~ 150 (316)
T cd07842 75 ADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGV 150 (316)
T ss_pred CCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccce
Confidence 23568999999975 77776643222 2368899999999999999999998 79999999999999999 999
Q ss_pred eeEecCCCCCCCCC------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccch-------
Q 004637 600 AKLSGYNIPLPSKK------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDG------- 660 (740)
Q Consensus 600 ~kl~DFGla~~~~~------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~------- 660 (740)
+||+|||++..... ++..+.+||.......++.++|||||||++|||++|+.||.......
T Consensus 151 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~ 230 (316)
T cd07842 151 VKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQ 230 (316)
T ss_pred EEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhH
Confidence 99999999864321 12235566666555567889999999999999999999997544322
Q ss_pred ---hHHHHHHhhhcCCc---------ccccccCccccCCCc---------H--HHHHHHHHHHHhccccCCCCCCCHHHH
Q 004637 661 ---LKLQLETCLAEAPS---------KLRAEADPSVRGTYA---------Y--DSLRTTVEITINCLSKDAAKRPSIEDV 717 (740)
Q Consensus 661 ---~~~~~~~~~~~~~~---------~~~~~~~~~l~~~~~---------~--~~~~~~~~li~~cl~~dP~~RPs~~ev 717 (740)
+...+.......+. ......+......++ . .....+.+++.+|++.||++|||+.|+
T Consensus 231 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ei 310 (316)
T cd07842 231 RDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEA 310 (316)
T ss_pred HHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence 01111000000000 000000000000000 0 223457899999999999999999999
Q ss_pred HHH
Q 004637 718 LWN 720 (740)
Q Consensus 718 l~~ 720 (740)
+++
T Consensus 311 l~~ 313 (316)
T cd07842 311 LEH 313 (316)
T ss_pred hcC
Confidence 864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=292.66 Aligned_cols=257 Identities=16% Similarity=0.235 Sum_probs=185.9
Q ss_pred cCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
++|++.+.||+|++|+||+|+.. +++.||+|.++.... ...+.+.+|++++++++||||+++++++. .+
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~ 73 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH--------SE 73 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe--------cC
Confidence 57888999999999999999954 689999999865432 23457889999999999999999999885 34
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC-CCceeEecCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLSGYN 606 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~-~~~~kl~DFG 606 (740)
...++||||++ ++|.+++... ....+++.....++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||
T Consensus 74 ~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 74 KRLYLVFEYLD-LDLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred CeEEEEEeccc-ccHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccc
Confidence 56899999996 5888877532 22346788888999999999999998 79999999999999985 5679999999
Q ss_pred CCCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 607 IPLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 607 la~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
++..... +...+.+||.......++.++|||||||++|||+||+.||......+....+............
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 228 (294)
T PLN00009 149 LARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW 228 (294)
T ss_pred cccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence 9853211 1233556666554456788999999999999999999999764432222211111111100000
Q ss_pred cc----c-----CccccCC----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 678 AE----A-----DPSVRGT----YAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 ~~----~-----~~~l~~~----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.. . -+..... ........+.+++.+|++.+|++||++.++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 229 PGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred cccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0 0000000 011123456789999999999999999999874
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-33 Score=299.79 Aligned_cols=261 Identities=16% Similarity=0.231 Sum_probs=189.9
Q ss_pred HhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecc--cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
..++|++.+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|++++++++||||+++++++... ....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQ--KSLE 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccC--CCcc
Confidence 457899999999999999999994 47899999998643 222345678899999999999999999987522 1122
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
+....|+||||+. ++|.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 92 ~~~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Df 162 (353)
T cd07850 92 EFQDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 162 (353)
T ss_pred ccCcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccC
Confidence 3456899999996 488888742 28888999999999999999999 79999999999999999999999999
Q ss_pred CCCCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc-
Q 004637 606 NIPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL- 676 (740)
Q Consensus 606 Gla~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~- 676 (740)
|+++.... ++..+.+||... ...++.++|||||||++|||++|+.||...+.......+.......+..+
T Consensus 163 g~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
T cd07850 163 GLARTAGTSFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFM 241 (353)
T ss_pred ccceeCCCCCCCCCCcccccccCHHHHh-CCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 99864322 222345555543 45678999999999999999999999976543222111111111100000
Q ss_pred ----------------------ccccCccc----cCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 677 ----------------------RAEADPSV----RGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 677 ----------------------~~~~~~~l----~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
........ ...........+.+++.+||+.||++|||+.|+++.-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~ 312 (353)
T cd07850 242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP 312 (353)
T ss_pred HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence 00000000 0000112345678999999999999999999999753
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=299.08 Aligned_cols=257 Identities=15% Similarity=0.236 Sum_probs=189.3
Q ss_pred HhcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecc--cccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK--QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~ 524 (740)
..++|++.+.||+|+||.||+|... +++.||||++... .......+.+|+++++++ +||||++++++|..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~------ 78 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA------ 78 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc------
Confidence 4567888999999999999999954 5889999988642 222335677899999999 99999999998742
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
.++...++||||++ ++|.+++.. ..++|..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 79 ~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 79 ENDKDIYLVFEYME-TDLHAVIRA----NILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred CCCceEEEEecccc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEee
Confidence 13345899999997 599988853 268899999999999999999998 7999999999999999999999999
Q ss_pred CCCCCCCCC--------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhh
Q 004637 605 YNIPLPSKK--------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 605 FGla~~~~~--------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 670 (740)
||++..... ++..+.+||.......++.++|||||||++|||+||+.||...........+.....
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~ 230 (337)
T cd07852 151 FGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIG 230 (337)
T ss_pred ccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 999853321 122345566555555678899999999999999999999975443322222111111
Q ss_pred cCCc------------ccccccC----ccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 671 EAPS------------KLRAEAD----PSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 671 ~~~~------------~~~~~~~----~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
..+. ....... .... .........+.+++.+||+.||++|||+.++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 231 PPSAEDIESIKSPFAATMLDSLPSRPRKPLD-ELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred CCCHHHHHHHHhhhHHHhhhhcccccccchh-hhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000 0000000 0000 0001124567899999999999999999999975
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-33 Score=289.81 Aligned_cols=255 Identities=18% Similarity=0.271 Sum_probs=187.8
Q ss_pred CCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc-cChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCCCCCc
Q 004637 453 FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
|++.+.||+|+||+||+|+.. +++.||||++..... .......+|+..+++++ ||||+++++++. .++.
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~--------~~~~ 72 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFR--------ENDE 72 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhh--------cCCc
Confidence 567889999999999999965 478999999875432 22234567999999999 999999999885 3456
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+ +|+|.+++.... ...+++..+..++.|++.||+|||+ .+++|+||||+||++++++.++|+|||.+.
T Consensus 73 ~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 73 LYFVFEYM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred EEEEEecC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccce
Confidence 89999999 789999886422 3468999999999999999999998 699999999999999999999999999985
Q ss_pred CCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcc------
Q 004637 610 PSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK------ 675 (740)
Q Consensus 610 ~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~------ 675 (740)
.... +...+.+||.......++.++||||||++++||++|+.||......+....+..........
T Consensus 148 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (283)
T cd07830 148 EIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGY 227 (283)
T ss_pred eccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHh
Confidence 4322 22234566665555567889999999999999999999997654433222222111111000
Q ss_pred -cccccCcccc-------CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 676 -LRAEADPSVR-------GTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 -~~~~~~~~l~-------~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.....+..+. ..........+.+++.+||+.||++||+++|++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 228 KLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred hhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0000000000 00001113567899999999999999999999864
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=272.91 Aligned_cols=240 Identities=22% Similarity=0.339 Sum_probs=184.3
Q ss_pred CCeeecCCCccEEEEEe-cCCCEEEEEEeecccc-cChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCCCCCceEE
Q 004637 456 TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
...||.|+.|.|++++. ..|..+|||.+..... ...+++++.+.++.+.+ .|.||+.+|||+. +..+++
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~--------n~dV~I 168 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT--------NTDVFI 168 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee--------CchHHH
Confidence 46799999999999995 4589999999986543 33466777788776665 8999999999973 334789
Q ss_pred EEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC---
Q 004637 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL--- 609 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~--- 609 (740)
.||.|.. -++.+++. -.+++++...-++...+.+||.||.+. ++|||||+||+|||+|+.|.+|+||||++-
T Consensus 169 cMelMs~-C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlv 243 (391)
T KOG0983|consen 169 CMELMST-CAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLV 243 (391)
T ss_pred HHHHHHH-HHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceee
Confidence 9999954 56666643 456688888888999999999999984 899999999999999999999999999973
Q ss_pred -----CCCCCCCCccccccccC--CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 610 -----PSKKGLESPLRGQYVSN--QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 610 -----~~~~~~~~~~~~~~~~~--~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
....|...|++||.... .+.|+-++|||||||+++||+||+.||.+.+.+ .+.+.....+.|..+.....
T Consensus 244 dSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td--Fe~ltkvln~ePP~L~~~~g- 320 (391)
T KOG0983|consen 244 DSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD--FEVLTKVLNEEPPLLPGHMG- 320 (391)
T ss_pred cccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc--HHHHHHHHhcCCCCCCcccC-
Confidence 22346666778776543 357889999999999999999999999875432 22333333333322222111
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
-...+.+++..|+.+|+.+||...+++++
T Consensus 321 ---------FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 321 ---------FSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred ---------cCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 12356689999999999999999998864
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=289.08 Aligned_cols=247 Identities=22% Similarity=0.387 Sum_probs=192.2
Q ss_pred HHhcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 448 ~~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
..++.|+..+.||+|+||.||+|... +++.||+|+++.... ..+.+.+|++++++++|+||+++++++..
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 86 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLV-------- 86 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEE--------
Confidence 35567888899999999999999965 688999999986544 45678999999999999999999998863
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
....++|+||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~ 161 (286)
T cd06614 87 GDELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFG 161 (286)
T ss_pred CCEEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccc
Confidence 356899999999999999996422 378999999999999999999998 799999999999999999999999999
Q ss_pred CCCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 607 IPLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 607 la~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
.+..... +...+.+||... ...++.++|||||||++|||++|+.||...........+.. ...+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~--~~~~---- 234 (286)
T cd06614 162 FAAQLTKEKSKRNSVVGTPYWMAPEVIK-RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITT--KGIP---- 234 (286)
T ss_pred hhhhhccchhhhccccCCcccCCHhHhc-CCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--cCCC----
Confidence 8643221 223345555543 44578899999999999999999999975443222221111 1110
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
...+ .......+.+++.+||+.+|.+||++.|++++.-
T Consensus 235 ~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 272 (286)
T cd06614 235 PLKN-------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPF 272 (286)
T ss_pred CCcc-------hhhCCHHHHHHHHHHhccChhhCcCHHHHhhChH
Confidence 0000 1112345679999999999999999999987543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=277.12 Aligned_cols=254 Identities=20% Similarity=0.283 Sum_probs=195.4
Q ss_pred CCHHHHHHHhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceee
Q 004637 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCI 517 (740)
Q Consensus 441 ~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~ 517 (740)
|+.++++. ...||.|+||+|+|-. .+.|+.+|||+++... ...++++..|.++..+- +.||||++||.++
T Consensus 61 F~~~~Lqd-------lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F 133 (361)
T KOG1006|consen 61 FTSDNLQD-------LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALF 133 (361)
T ss_pred cccchHHH-------HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhh
Confidence 45555544 3579999999999987 4569999999998653 35567899999865554 7999999999886
Q ss_pred eeccCCCCCCCceEEEEecccCcchhhhccc--ccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeec
Q 004637 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTD--WKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (740)
Q Consensus 518 ~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld 595 (740)
..+..|+.||.|.- +|..+... ...+..+++...-.|..-...||.||..+ ..|||||+||+|||+|
T Consensus 134 --------~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILld 202 (361)
T KOG1006|consen 134 --------SEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLD 202 (361)
T ss_pred --------cCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEe
Confidence 23447999999964 77655431 12345688888888888889999999986 8999999999999999
Q ss_pred CCCceeEecCCCC--------CCCCCCCCCccccccccCCC-CCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHH
Q 004637 596 KALTAKLSGYNIP--------LPSKKGLESPLRGQYVSNQP-GDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLE 666 (740)
Q Consensus 596 ~~~~~kl~DFGla--------~~~~~~~~~~~~~~~~~~~~-~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~ 666 (740)
..|.+||||||++ +..+.|...|++||...... +|+-+|||||+|++|||+.||+.|+..-+ ...+++.
T Consensus 203 r~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~--svfeql~ 280 (361)
T KOG1006|consen 203 RHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD--SVFEQLC 280 (361)
T ss_pred cCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH--HHHHHHH
Confidence 9999999999985 45677888899998776544 48999999999999999999999997533 3555555
Q ss_pred HhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 667 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
......|+.+.... ...+....+.+++..|+.+|-++||...++.+.-
T Consensus 281 ~Vv~gdpp~l~~~~-------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~ 328 (361)
T KOG1006|consen 281 QVVIGDPPILLFDK-------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFP 328 (361)
T ss_pred HHHcCCCCeecCcc-------cccccCHHHHHHHHHHhhcccccCcchhhhhcCc
Confidence 54444433222111 1122345677899999999999999999987643
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=286.06 Aligned_cols=236 Identities=18% Similarity=0.221 Sum_probs=175.7
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeeccccc---ChhHHHHHHHHH-hhccCcccceeeceeeeeccCCCCCCCceE
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---LPQSLMQHVELL-SKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~~Ei~il-~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||.||+|+. .+++.||||.++..... ....+..|..++ ...+|+||+++++++. .++..+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~--------~~~~~~ 73 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ--------SKDYLY 73 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE--------cCCeEE
Confidence 5689999999999985 46899999998754321 123345555544 4458999999999874 345689
Q ss_pred EEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ .+|+||||+|+||++++++.+||+|||++...
T Consensus 74 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 74 LVMEYLNGGDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred EEEeccCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 99999999999999953 3468899999999999999999998 79999999999999999999999999987543
Q ss_pred C-----CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccC
Q 004637 612 K-----KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRG 686 (740)
Q Consensus 612 ~-----~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 686 (740)
. .+...+.+||.... ..++.++||||||+++|||+||..||...+.......+.......+...
T Consensus 148 ~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------- 216 (260)
T cd05611 148 LENKKFVGTPDYLAPETILG-VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEV---------- 216 (260)
T ss_pred cccccCCCCcCccChhhhcC-CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcc----------
Confidence 2 23334556665543 3478899999999999999999999986554433222211111111001
Q ss_pred CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 687 TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 687 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
.......+.+++.+||+.||++||++.++.+
T Consensus 217 --~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 217 --KEFCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred --cccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 1112345679999999999999997754444
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=300.32 Aligned_cols=262 Identities=15% Similarity=0.216 Sum_probs=189.0
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccC------C
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD------H 523 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~------~ 523 (740)
.+|.+.+.||+|+||.||+|+. .+|+.||+|.+........+.+.+|++++++++||||+++++++...... .
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 6788999999999999999995 56899999999876655567789999999999999999999876432110 0
Q ss_pred CCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeec-CCCceeE
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD-KALTAKL 602 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld-~~~~~kl 602 (740)
.......++||||++ ++|.+++. ...+++.....++.|+++||+|||+ .+|+||||||+||+++ +++.+|+
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE----QGPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEEE
Confidence 112245899999997 58988874 2358899999999999999999998 7999999999999997 4567899
Q ss_pred ecCCCCCCCC------------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhh
Q 004637 603 SGYNIPLPSK------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 603 ~DFGla~~~~------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 670 (740)
+|||.+.... .+...+.+||.......++.++|||||||++|||++|+.||.................
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~ 236 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVP 236 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 9999985321 1223355667655555678899999999999999999999975543222211111100
Q ss_pred cCCc----ccccccCcccc-----CCC-----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 671 EAPS----KLRAEADPSVR-----GTY-----AYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 671 ~~~~----~~~~~~~~~l~-----~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.... ........... ... ......++.+++.+|++.||++|||+.|++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000 00000000000 000 01123456799999999999999999999864
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=285.30 Aligned_cols=241 Identities=22% Similarity=0.326 Sum_probs=185.0
Q ss_pred CCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+||+++++++. .+.
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~--------~~~ 72 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQ--------ENG 72 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheec--------cCC
Confidence 4777899999999999999954 58899999987542 233457889999999999999999999874 345
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC-ceeEecCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGYNI 607 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~-~~kl~DFGl 607 (740)
..++|+||+++++|.+++... ....+++..+..++.|+++||+|||+ .+|+|+||||+||++++++ .+|++|||.
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 73 RLFIVMEYCDGGDLMKRINRQ-RGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred eEEEEEecCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEeccccc
Confidence 689999999999999998642 23357999999999999999999998 7999999999999999885 569999998
Q ss_pred CCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 608 PLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 608 a~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
+..... +...+.+||... ...++.++|||||||++|||++|+.||........ +........ .
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~ape~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~----~ 220 (257)
T cd08225 149 ARQLNDSMELAYTCVGTPYYLSPEICQ-NRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL---VLKICQGYF----A 220 (257)
T ss_pred chhccCCcccccccCCCccccCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHhcccC----C
Confidence 754322 222244455433 34567899999999999999999999975443222 221111111 0
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
...+ .....+.+++.+||..+|++|||+.|+++.
T Consensus 221 ~~~~--------~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 221 PISP--------NFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCC--------CCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1111 112356799999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=289.58 Aligned_cols=242 Identities=20% Similarity=0.272 Sum_probs=182.8
Q ss_pred CCCCCCeeecCCCccEEEEEe----cCCCEEEEEEeeccc----ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~ 522 (740)
+|++.+.||+|+||.||+|+. .+|+.||+|+++... ....+.+.+|+++++++ +|+||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ----- 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee-----
Confidence 477889999999999999985 368999999997532 22346688899999999 5999999987763
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeE
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl 602 (740)
.+...++||||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||
T Consensus 76 ---~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 76 ---TDTKLHLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred ---cCCeEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEE
Confidence 34568999999999999999853 3468889999999999999999998 79999999999999999999999
Q ss_pred ecCCCCCCCCC----------CCCCccccccccCC-CCCCCccceehhhHHHHHHHhCCCCCCCCccchh-HHHHHHhhh
Q 004637 603 SGYNIPLPSKK----------GLESPLRGQYVSNQ-PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGL-KLQLETCLA 670 (740)
Q Consensus 603 ~DFGla~~~~~----------~~~~~~~~~~~~~~-~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~-~~~~~~~~~ 670 (740)
+|||++..... +...+.+||..... ..++.++||||||+++|||+||+.||........ .........
T Consensus 147 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~ 226 (290)
T cd05613 147 TDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK 226 (290)
T ss_pred eeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc
Confidence 99999854322 22335556655432 3457889999999999999999999974322211 111111111
Q ss_pred cCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 004637 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 671 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 720 (740)
..+ .. +......+.+++.+||+.||++|| ++++++.+
T Consensus 227 ~~~-~~------------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 227 SEP-PY------------PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred cCC-CC------------CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 110 01 111224556999999999999997 67777664
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=296.22 Aligned_cols=255 Identities=15% Similarity=0.222 Sum_probs=187.2
Q ss_pred cCCC-CCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccC--------------hhHHHHHHHHHhhccCcccceeec
Q 004637 451 NNFD-PTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHL--------------PQSLMQHVELLSKLRHRHLVSILG 514 (740)
Q Consensus 451 ~~f~-~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~--------------~~~~~~Ei~il~~l~H~nIv~l~g 514 (740)
++|. +.+.||+|+||+||+|+. .+++.||||+++...... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4554 357799999999999995 468999999987542211 125789999999999999999999
Q ss_pred eeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceee
Q 004637 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594 (740)
Q Consensus 515 ~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 594 (740)
++. .++..++||||++ |+|.+++. ....+++.....++.|++.||+|||+ .+|+||||||+||++
T Consensus 88 ~~~--------~~~~~~lv~e~~~-~~l~~~l~---~~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill 152 (335)
T PTZ00024 88 VYV--------EGDFINLVMDIMA-SDLKKVVD---RKIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFI 152 (335)
T ss_pred EEe--------cCCcEEEEEeccc-cCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEE
Confidence 875 3456899999997 59999885 34468899999999999999999998 799999999999999
Q ss_pred cCCCceeEecCCCCCCCC-----------------------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCC
Q 004637 595 DKALTAKLSGYNIPLPSK-----------------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQ 651 (740)
Q Consensus 595 d~~~~~kl~DFGla~~~~-----------------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~ 651 (740)
+.++.+||+|||++.... .+...+.+||.......++.++|||||||++|||+||+.
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~ 232 (335)
T PTZ00024 153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKP 232 (335)
T ss_pred CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 999999999999875332 012234556665544556889999999999999999999
Q ss_pred CCCCCccchhHHHHHHhhhcCCcc-ccccc------------CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHH
Q 004637 652 VKSTSEVDGLKLQLETCLAEAPSK-LRAEA------------DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718 (740)
Q Consensus 652 p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl 718 (740)
||...+..+....+.......... +.... .+... .........+.+++.+|++.||++||+++|++
T Consensus 233 p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 311 (335)
T PTZ00024 233 LFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEAL 311 (335)
T ss_pred CCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHh
Confidence 998665433322222211111100 00000 00000 00111235677999999999999999999999
Q ss_pred HHh
Q 004637 719 WNL 721 (740)
Q Consensus 719 ~~L 721 (740)
..-
T Consensus 312 ~~~ 314 (335)
T PTZ00024 312 KHE 314 (335)
T ss_pred cCc
Confidence 743
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=296.21 Aligned_cols=260 Identities=18% Similarity=0.270 Sum_probs=192.6
Q ss_pred HHHHhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecc--cccChhHHHHHHHHHhhccCcccceeeceeeeeccC
Q 004637 446 IEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (740)
Q Consensus 446 l~~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~ 522 (740)
+...+++|++.+.||+|+||.||+|+ ..+++.||||++... .....+.+.+|++++++++||||+++++++..
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---- 80 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS---- 80 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec----
Confidence 44567899999999999999999998 447899999988643 22334678899999999999999999998752
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeE
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl 602 (740)
.+...++||||+ +++|.++++ ...+++.....++.|+++||+|||+ .+|+||||||+||++++++.+||
T Consensus 81 ---~~~~~~lv~e~~-~~~L~~~~~----~~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l 149 (328)
T cd07856 81 ---PLEDIYFVTELL-GTDLHRLLT----SRPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKI 149 (328)
T ss_pred ---CCCcEEEEeehh-ccCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEe
Confidence 234589999999 468988874 3457888889999999999999999 79999999999999999999999
Q ss_pred ecCCCCCCCCC------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 603 SGYNIPLPSKK------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 603 ~DFGla~~~~~------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
+|||.+..... +...+.+||.......++.++|||||||++|||+||+.||...........+.......+.+.
T Consensus 150 ~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~ 229 (328)
T cd07856 150 CDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDV 229 (328)
T ss_pred CccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 99999864332 222345666654445678899999999999999999999976543322222222111111111
Q ss_pred ccc-cC-------ccc--cCCCc-----HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 677 RAE-AD-------PSV--RGTYA-----YDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 677 ~~~-~~-------~~l--~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
... .+ ..+ ....+ ......+.+++.+|++.+|++||++.|++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 230 INTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 00 000 00001 1123567799999999999999999999876
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=288.08 Aligned_cols=254 Identities=19% Similarity=0.306 Sum_probs=189.3
Q ss_pred CCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
|++.+.||+|++|.||+|+. .+++.+|+|.++.... .....+.+|++++++++|+||+++++++. .+..
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~ 72 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR--------HKGD 72 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc--------cCCC
Confidence 56778999999999999995 4688999999875432 23467889999999999999999999875 3466
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||+++ +|.+++.. ....+++..+..++.|+++||+|||+ .+|+|+||||+||++++++.+||+|||.+.
T Consensus 73 ~~~v~e~~~~-~l~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 73 LYLVFEFMDT-DLYKLIKD--RQRGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred EEEEEeccCC-CHHHHHHh--hcccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 8999999975 88888864 23578999999999999999999998 799999999999999999999999999874
Q ss_pred CCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC-Ccccccc
Q 004637 610 PSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA-PSKLRAE 679 (740)
Q Consensus 610 ~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 679 (740)
.... +...+.+||.......++.++||||||+++|||+||+.||...+..+....+....... +......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (283)
T cd05118 147 SFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKF 226 (283)
T ss_pred ecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccc
Confidence 3322 22234556665544467889999999999999999999997655433222221111110 0000000
Q ss_pred cC------cccc-------CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 680 AD------PSVR-------GTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~~------~~l~-------~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.+ .... .....+...++.+++.+||+.||.+||++.|++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 227 TSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00 0000 00112335678899999999999999999999864
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=283.55 Aligned_cols=245 Identities=17% Similarity=0.182 Sum_probs=181.4
Q ss_pred HHHHHHHhcCCCCCCee--ecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhc-cCcccceeeceeee
Q 004637 443 LEEIEEATNNFDPTNLI--GEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCIL 518 (740)
Q Consensus 443 ~~~l~~~~~~f~~~~~i--G~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~ 518 (740)
..+.....++|++.+.+ |+|+||.||+++. .+++.+|+|.+........ |+.+...+ +||||+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~- 79 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVT- 79 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEe-
Confidence 34555666788888877 9999999999994 5688999999875432211 22222222 6999999999885
Q ss_pred eccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC
Q 004637 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (740)
Q Consensus 519 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~ 598 (740)
.++..++||||+++|+|.+++.. ...+++.++..++.|+++||+|||+ .+++||||||+||+++.++
T Consensus 80 -------~~~~~~iv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~ 146 (267)
T PHA03390 80 -------TLKGHVLIMDYIKDGDLFDLLKK---EGKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAK 146 (267)
T ss_pred -------cCCeeEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCC
Confidence 23468999999999999999953 3378999999999999999999999 7999999999999999998
Q ss_pred -ceeEecCCCCCCCC-----CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhH-HHHHHhhhc
Q 004637 599 -TAKLSGYNIPLPSK-----KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLK-LQLETCLAE 671 (740)
Q Consensus 599 -~~kl~DFGla~~~~-----~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~-~~~~~~~~~ 671 (740)
.++|+|||++.... .++..+.+||... ...++.++|||||||++|||++|+.||......... ....... .
T Consensus 147 ~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~ 224 (267)
T PHA03390 147 DRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIK-GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-Q 224 (267)
T ss_pred CeEEEecCccceecCCCccCCCCCcccChhhhc-CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-c
Confidence 99999999875332 2334456666654 345788999999999999999999999854332211 1111111 1
Q ss_pred CCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCC-HHHHHHH
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS-IEDVLWN 720 (740)
Q Consensus 672 ~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs-~~evl~~ 720 (740)
.+..... .....+.+++.+||+.||++||+ ++|++++
T Consensus 225 ~~~~~~~------------~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 225 KKLPFIK------------NVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred ccCCccc------------ccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 1001111 22345679999999999999996 6888753
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=326.09 Aligned_cols=245 Identities=22% Similarity=0.348 Sum_probs=193.2
Q ss_pred HHhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 448 ~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
..+-+++....||.|.||.||-|. ..+|...|||.++... .+..+...+|+.++..++|||+|++||+-.
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv------- 1304 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEV------- 1304 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceee-------
Confidence 345567788999999999999998 6779999999997543 444567899999999999999999999754
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
..+..+|.||||++|+|.+.+. ..+..++.....+..|++.|++|||+ .|||||||||+||+||.+|.+|++|
T Consensus 1305 -HRekv~IFMEyC~~GsLa~ll~---~gri~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~D 1377 (1509)
T KOG4645|consen 1305 -HREKVYIFMEYCEGGSLASLLE---HGRIEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGD 1377 (1509)
T ss_pred -cHHHHHHHHHHhccCcHHHHHH---hcchhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeec
Confidence 3455899999999999999994 45557777788899999999999999 7999999999999999999999999
Q ss_pred CCCCCCCC-------------CCCCCccccccccCCC--CCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhh
Q 004637 605 YNIPLPSK-------------KGLESPLRGQYVSNQP--GDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCL 669 (740)
Q Consensus 605 FGla~~~~-------------~~~~~~~~~~~~~~~~--~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~ 669 (740)
||.|.... .|+..|++||.+.+.. +..-++||||+|||++||+||++||...+.+- .-+.+...
T Consensus 1378 FGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~-aIMy~V~~ 1456 (1509)
T KOG4645|consen 1378 FGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW-AIMYHVAA 1456 (1509)
T ss_pred ccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh-HHHhHHhc
Confidence 99985332 2566677887766543 44568999999999999999999998654321 11122222
Q ss_pred hcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 670 AEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 670 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.+.| ..+.....+-.+++..|++.||++|.++.|+++.
T Consensus 1457 gh~P-------------q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1457 GHKP-------------QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred cCCC-------------CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 2222 1122233455699999999999999988877754
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=273.14 Aligned_cols=265 Identities=17% Similarity=0.304 Sum_probs=198.8
Q ss_pred CCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeec--ccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~--~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
.|+...+||+|.||.||+|+ ..+|+.||+|++-. ..........+|+++|..++|+|++.++..|............
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 34456789999999999999 45588899987643 2345567789999999999999999999999754444434556
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
.+|+||++|+. +|.-+|.+ ....++..++.+++.++..||.|+|+ ..|+|||+||+|+||+.++.+||+|||++
T Consensus 98 t~ylVf~~ceh-DLaGlLsn--~~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSN--RKVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcC--ccccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 79999999997 99999864 34568889999999999999999999 69999999999999999999999999999
Q ss_pred CCCC-------CC------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcc
Q 004637 609 LPSK-------KG------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 609 ~~~~-------~~------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
+... .+ +..|..+|...+..+|+++.|||.-|||+.||.||.+-+.+.........+..........
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 5421 11 2234456777888899999999999999999999999988766544443333322221111
Q ss_pred cccccC-----------ccccCCC--cHHHH------HHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 676 LRAEAD-----------PSVRGTY--AYDSL------RTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 676 ~~~~~~-----------~~l~~~~--~~~~~------~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
++..+| |--.+.+ -.+.. ...++++.+++..||.+|+++++++.+--
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 111111 1000100 01111 25679999999999999999999987644
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=282.47 Aligned_cols=233 Identities=19% Similarity=0.298 Sum_probs=180.4
Q ss_pred eecCCCccEEEEEec-CCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEE
Q 004637 459 IGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (740)
Q Consensus 459 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~ 534 (740)
||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++. .+...++||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~~lv~ 72 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK--------DKKYIYMLM 72 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE--------cCCccEEEE
Confidence 699999999999964 48899999997543 233467899999999999999999999874 345689999
Q ss_pred ecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCCC
Q 004637 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKG 614 (740)
Q Consensus 535 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 614 (740)
||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++|+||||+||+++.++.+||+|||.+......
T Consensus 73 e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 73 EYCLGGELWTILRD---RGLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred ecCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 99999999999953 3458899999999999999999998 79999999999999999999999999998644332
Q ss_pred --------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhh-cCCcccccccCcccc
Q 004637 615 --------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA-EAPSKLRAEADPSVR 685 (740)
Q Consensus 615 --------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 685 (740)
...+.+||... ...++.++|+||||+++|||++|+.||.....+. ......... ...
T Consensus 147 ~~~~~~~~~~~~~~PE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~------------ 212 (262)
T cd05572 147 QKTWTFCGTPEYVAPEIIL-NKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP-MEIYNDILKGNGK------------ 212 (262)
T ss_pred cccccccCCcCccChhHhc-CCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH-HHHHHHHhccCCC------------
Confidence 23345555543 4557889999999999999999999998655222 111111110 000
Q ss_pred CCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHH
Q 004637 686 GTYAYDSLRTTVEITINCLSKDAAKRPS-----IEDVLW 719 (740)
Q Consensus 686 ~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~ 719 (740)
..++......+.+++.+||+.+|++||+ ++|+++
T Consensus 213 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 213 LEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 0111111345679999999999999999 666665
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=278.82 Aligned_cols=242 Identities=23% Similarity=0.391 Sum_probs=189.6
Q ss_pred CCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
+|+..+.||+|++|.||++... +++.+++|++........+.+.+|++++++++|+||+++++++. .+...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~~ 72 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL--------KKDEL 72 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEe--------cCCeE
Confidence 4777899999999999999965 68899999998665445678999999999999999999999875 23558
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
++++||+++++|.+++.. ....+++..+..++.|+++||+|||+ .+++||||+|+||++++++.+||+|||.+..
T Consensus 73 ~l~~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 73 WIVMEFCSGGSLKDLLKS--TNQTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EEEEecCCCCcHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 999999999999999864 22568999999999999999999999 7999999999999999999999999998854
Q ss_pred CCCC--------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCc
Q 004637 611 SKKG--------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADP 682 (740)
Q Consensus 611 ~~~~--------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (740)
.... ...+.+||... ...++.++||||||+++|||++|+.||...+.......... .. .....++
T Consensus 148 ~~~~~~~~~~~~~~~~~~PE~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~---~~~~~~~ 220 (253)
T cd05122 148 LSDTKARNTMVGTPYWMAPEVIN-GKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT---NG---PPGLRNP 220 (253)
T ss_pred ccccccccceecCCcccCHHHHc-CCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh---cC---CCCcCcc
Confidence 4332 22344555543 33468899999999999999999999976533222222111 11 0011110
Q ss_pred cccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 683 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
......+.+++.+||+.||++|||+.|+++.
T Consensus 221 -------~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 221 -------EKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred -------cccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0012456799999999999999999999864
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=297.11 Aligned_cols=264 Identities=15% Similarity=0.260 Sum_probs=190.6
Q ss_pred HHHhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCC
Q 004637 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (740)
Q Consensus 447 ~~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~ 523 (740)
....++|++.+.||+|+||.||+|. ..++..||||++.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~ 88 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL--S 88 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCc--c
Confidence 3356789999999999999999998 4578999999986432 223356889999999999999999999875211 1
Q ss_pred CCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEe
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~ 603 (740)
.......++||||+ +++|.+++. ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+|++
T Consensus 89 ~~~~~~~~lv~e~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~ 160 (343)
T cd07880 89 LDRFHDFYLVMPFM-GTDLGKLMK----HEKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKIL 160 (343)
T ss_pred ccccceEEEEEecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEe
Confidence 11223579999999 679988874 3468999999999999999999998 799999999999999999999999
Q ss_pred cCCCCCCCCC------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 604 GYNIPLPSKK------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 604 DFGla~~~~~------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
|||++..... +...+.+||.......++.++|||||||++|||++|+.||...........+.......+..+.
T Consensus 161 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07880 161 DFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV 240 (343)
T ss_pred ecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 9999864432 2233455665544345788999999999999999999999865432221111111111110000
Q ss_pred cccC-----------ccccC----CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 678 AEAD-----------PSVRG----TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 ~~~~-----------~~l~~----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
..+. +.... .........+.+++.+|++.||++|||+.+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 00000 0011223457799999999999999999999953
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=284.59 Aligned_cols=237 Identities=16% Similarity=0.191 Sum_probs=176.7
Q ss_pred eeecCCCccEEEEEe-cCCCEEEEEEeeccccc---ChhHHHHHHH---HHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 458 LIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---LPQSLMQHVE---LLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 458 ~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~~Ei~---il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
.||+|+||.||+|+. .+++.||+|.+...... ....+..|.. .++...||+|+++++++. .++..
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~~~ 72 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH--------TPDKL 72 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeee--------cCCEE
Confidence 489999999999985 45889999998754221 1122344443 444457999999988774 34568
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
++||||+++|+|.+++. ....+++..+..++.|+++|++|||+ .+|+||||||+||++++++.+||+|||++..
T Consensus 73 ~~v~e~~~g~~L~~~l~---~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 73 SFILDLMNGGDLHYHLS---QHGVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EEEEecCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 99999999999999885 34569999999999999999999998 7999999999999999999999999998753
Q ss_pred CC-------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCcc
Q 004637 611 SK-------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683 (740)
Q Consensus 611 ~~-------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (740)
.. .+...+.+||.......++.++|||||||++|||++|+.||............... ... ++.
T Consensus 147 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~--------~~~ 217 (278)
T cd05606 147 FSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT-LTM--------AVE 217 (278)
T ss_pred cCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh-hcc--------CCC
Confidence 22 23444566666554456788999999999999999999999765322221111111 111 111
Q ss_pred ccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHHh
Q 004637 684 VRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWNL 721 (740)
Q Consensus 684 l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~L 721 (740)
+. ......+.+++.+|+..+|++|| ++.|++++-
T Consensus 218 ~~----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~ 256 (278)
T cd05606 218 LP----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHP 256 (278)
T ss_pred CC----CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCc
Confidence 11 11134567999999999999999 999998643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-33 Score=276.56 Aligned_cols=256 Identities=21% Similarity=0.275 Sum_probs=203.2
Q ss_pred HHHHHHHhcCCCCCCeeecCCCccEEEEEec------CCCEEEEEEeecccc-cChhHHHHHHHHHhhccCcccceeece
Q 004637 443 LEEIEEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGH 515 (740)
Q Consensus 443 ~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~nIv~l~g~ 515 (740)
..++.....+++...++-+|.||.||+|.+. +.+.|-||.++.... -....+..|...+..+.|||+.++.|+
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 4466666778888899999999999999654 345677787765432 223568889999999999999999999
Q ss_pred eeeeccCCCCCCCceEEEEecccCcchhhhcc-----cccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCC
Q 004637 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLT-----DWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTE 590 (740)
Q Consensus 516 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~ 590 (740)
++. +....+.+|.++.-|+|..+|. +....+.++-.+.+.++.|++.|++|||. .+|||.||..+
T Consensus 356 ~ie-------~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaR 425 (563)
T KOG1024|consen 356 SIE-------DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAAR 425 (563)
T ss_pred Eee-------ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhh
Confidence 974 3455799999999999999997 33344567777889999999999999999 79999999999
Q ss_pred ceeecCCCceeEecCCCCCCCCCCCCC-----------ccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCcc
Q 004637 591 NILLDKALTAKLSGYNIPLPSKKGLES-----------PLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEV 658 (740)
Q Consensus 591 NILld~~~~~kl~DFGla~~~~~~~~~-----------~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~ 658 (740)
|++||+...+||+|=.+++....+... ++..|- .....|+.++|||||||+||||+| |+.|+...+.
T Consensus 426 NCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEa-l~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP 504 (563)
T KOG1024|consen 426 NCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEA-LQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP 504 (563)
T ss_pred cceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHH-HhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH
Confidence 999999999999999998754433222 222222 224568899999999999999999 9999987777
Q ss_pred chhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 659 DGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
.++..+++.... -..+.+|+.+++.++..||..+|++||+++|++..|.+.
T Consensus 505 fEm~~ylkdGyR---------------laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 505 FEMEHYLKDGYR---------------LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred HHHHHHHhccce---------------ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 666655543321 123456778899999999999999999999999999754
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=317.09 Aligned_cols=254 Identities=21% Similarity=0.334 Sum_probs=184.6
Q ss_pred HHHhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc-ccChhHHHHHHHHHhhccCcccceeeceeeeeccC--
Q 004637 447 EEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD-- 522 (740)
Q Consensus 447 ~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~-- 522 (740)
-+...+|++.+.||+||||.|||++. -||+.||||++.... ......+.+|+..+++++|||||+++..|+....+
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 35667888899999999999999994 489999999998653 33345789999999999999999999776532110
Q ss_pred -------------------------------------------------C-------------------CC---------
Q 004637 523 -------------------------------------------------H-------------------PN--------- 525 (740)
Q Consensus 523 -------------------------------------------------~-------------------~~--------- 525 (740)
. .+
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence 0 00
Q ss_pred --------------------------------CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHH
Q 004637 526 --------------------------------TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573 (740)
Q Consensus 526 --------------------------------~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~y 573 (740)
....+||-||||+.-.+.+++++..... .-...++++++|++||+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHH
Confidence 0034789999999988888886422111 345678999999999999
Q ss_pred HHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC---------------------------CCCCCCccccccccC
Q 004637 574 LHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS---------------------------KKGLESPLRGQYVSN 626 (740)
Q Consensus 574 LH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~---------------------------~~~~~~~~~~~~~~~ 626 (740)
+|+ ++||||||||.||++|++..+||+|||+|... ..|+..|.+||....
T Consensus 713 IH~---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~ 789 (1351)
T KOG1035|consen 713 IHD---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD 789 (1351)
T ss_pred HHh---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence 999 79999999999999999999999999998430 113444667777665
Q ss_pred CC--CCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhcc
Q 004637 627 QP--GDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCL 704 (740)
Q Consensus 627 ~~--~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl 704 (740)
.. .|+.|+|+||+|||++||+. ||...- +-...+.. .... .++.. .++..+....-..+|.+++
T Consensus 790 ~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM--ERa~iL~~-LR~g--~iP~~------~~f~~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 790 TSSNKYNSKIDMYSLGIVLFEMLY---PFGTSM--ERASILTN-LRKG--SIPEP------ADFFDPEHPEEASLIRWLL 855 (1351)
T ss_pred cccccccchhhhHHHHHHHHHHhc---cCCchH--HHHHHHHh-cccC--CCCCC------cccccccchHHHHHHHHHh
Confidence 55 69999999999999999985 565321 11111111 1110 11111 1122222334458999999
Q ss_pred ccCCCCCCCHHHHHH
Q 004637 705 SKDAAKRPSIEDVLW 719 (740)
Q Consensus 705 ~~dP~~RPs~~evl~ 719 (740)
+.||++|||+.|++.
T Consensus 856 ~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLN 870 (1351)
T ss_pred cCCCccCCCHHHHhh
Confidence 999999999999986
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=280.60 Aligned_cols=242 Identities=23% Similarity=0.321 Sum_probs=187.7
Q ss_pred CCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|+..+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++||||+++++++... ...
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~ 74 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE------EKN 74 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC------CCC
Confidence 4777899999999999999965 689999999875542 3457889999999999999999999887521 125
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++|+||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++|+||+|+||+++.++.+||+|||.+
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKK---FGKLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred eEEEEEEecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccE
Confidence 68999999999999999964 2378999999999999999999999 79999999999999999999999999987
Q ss_pred CCCCCC-----------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhh-cCCccc
Q 004637 609 LPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA-EAPSKL 676 (740)
Q Consensus 609 ~~~~~~-----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~ 676 (740)
...... ...+.+||... ....+.++||||||+++|||++|+.||..... .......... ...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~--- 222 (260)
T cd06606 149 KRLGDIETGEGTGSVRGTPYWMAPEVIR-GEEYGRAADIWSLGCTVIEMATGKPPWSELGN--PMAALYKIGSSGEP--- 222 (260)
T ss_pred EecccccccccccCCCCCccccCHhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--hHHHHHhccccCCC---
Confidence 533222 22234445443 33478899999999999999999999986541 1111111110 010
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
...+......+.+++.+|++.||++||++.|+++.
T Consensus 223 ---------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 223 ---------PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred ---------cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 01111223567799999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=293.11 Aligned_cols=260 Identities=15% Similarity=0.214 Sum_probs=193.5
Q ss_pred CCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++++.++||||+++++++..... ....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~~~ 77 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSP---EDFN 77 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCc---cccc
Confidence 5788899999999999999954 58999999987543 3345678999999999999999999998863211 2234
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..|+||||+++ +|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.++|+|||++
T Consensus 78 ~~~lv~e~~~~-~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 78 DVYIVTELMET-DLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred ceEEEecchhh-hHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 68999999984 89988853 3478999999999999999999999 79999999999999999999999999998
Q ss_pred CCCCCC------------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 609 LPSKKG------------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 609 ~~~~~~------------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
...... +..+.+||.......++.++||||||+++|||++|+.||...........+.......+...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 151 RGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEED 230 (330)
T ss_pred EeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhH
Confidence 543221 22245566655444778899999999999999999999987654433333222221111100
Q ss_pred ccccCcc--------cc--CC-----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 677 RAEADPS--------VR--GT-----YAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 677 ~~~~~~~--------l~--~~-----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
....+.. .. .. ........+.+++.+||+.+|++||++.+++..-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence 0000000 00 00 0011245678999999999999999999999863
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=281.78 Aligned_cols=242 Identities=21% Similarity=0.285 Sum_probs=183.6
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc-----ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-----RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
.+|++.+.||+|+||.||+|+. .+++.||+|.+.... ......+.+|++++++++|+||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~----- 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP----- 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC-----
Confidence 4688899999999999999995 468999999885321 12235788999999999999999999987421
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
.....++||||+++++|.+++.. ...+++.....++.|++.||+|||+ .+++||||||+||+++.++.++|+|
T Consensus 77 -~~~~~~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 77 -EEKKLSIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred -CCCEEEEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECc
Confidence 23457899999999999999853 3457899999999999999999998 7999999999999999999999999
Q ss_pred CCCCCCCCC------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC
Q 004637 605 YNIPLPSKK------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 605 FGla~~~~~------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
||+++.... +...+.+||... ...++.++|||||||++|||++|+.||....... ..........
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~ 226 (264)
T cd06653 150 FGASKRIQTICMSGTGIKSVTGTPYWMSPEVIS-GEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA--AIFKIATQPT 226 (264)
T ss_pred cccccccccccccCccccccCCcccccCHhhhc-CCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH--HHHHHHcCCC
Confidence 999854321 122244555543 3456789999999999999999999997543221 1111111111
Q ss_pred CcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 673 ~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
. .. .+......+.+++.+||+ +|.+||++.+++.+
T Consensus 227 ~----~~--------~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 227 K----PM--------LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred C----CC--------CCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 1 11 111223456699999999 57999999988763
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=288.52 Aligned_cols=235 Identities=21% Similarity=0.365 Sum_probs=182.7
Q ss_pred CeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEEe
Q 004637 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLE 535 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~E 535 (740)
..||+|+||.||+|.. .+++.||||.+..........+.+|+.++++++|+||+++++++. .++..++|||
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------~~~~~~lv~e 97 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL--------VGDELWVVME 97 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEE--------eCCEEEEEEe
Confidence 5799999999999985 578999999987554444567899999999999999999999875 3456899999
Q ss_pred cccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCC--
Q 004637 536 HISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK-- 613 (740)
Q Consensus 536 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~-- 613 (740)
|+++++|.+++. ...+++.....++.|++.|++|||+ .+++||||||+||++++++.++|+|||++.....
T Consensus 98 ~~~~~~L~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~ 170 (292)
T cd06657 98 FLEGGALTDIVT----HTRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 170 (292)
T ss_pred cCCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccc
Confidence 999999999874 2357899999999999999999998 7999999999999999999999999998743211
Q ss_pred -------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccC
Q 004637 614 -------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRG 686 (740)
Q Consensus 614 -------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 686 (740)
+...+.+||... ...++.++|||||||++|||++|+.||...........+... .+..... .
T Consensus 171 ~~~~~~~~~~~y~~pE~~~-~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~~-~------ 239 (292)
T cd06657 171 PRRKSLVGTPYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN---LPPKLKN-L------ 239 (292)
T ss_pred ccccccccCccccCHHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhh---CCcccCC-c------
Confidence 222344555443 455688999999999999999999999765433322222211 1111110 0
Q ss_pred CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 687 TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 687 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
......+.+++.+||+.||.+||++.|+++.
T Consensus 240 ---~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 240 ---HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred ---ccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 0112345689999999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=289.65 Aligned_cols=253 Identities=18% Similarity=0.227 Sum_probs=178.1
Q ss_pred CeeecCCCccEEEEEecCCCEEEEEEeecc--cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEE
Q 004637 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~ 534 (740)
+.+|.|+++.||+++. +++.||||+++.. .....+.+.+|++++++++||||+++++++. ..+..+++|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~--------~~~~~~~~~ 78 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI--------VDSELYVVS 78 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee--------cCCeEEEEE
Confidence 3344445544555444 6899999999754 2334467999999999999999999999875 345589999
Q ss_pred ecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCC-
Q 004637 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK- 613 (740)
Q Consensus 535 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~- 613 (740)
||+++|+|.+++.... ...+++.....++.|+++||+|||+ .+|+||||||+||+++.++.+|++|||.+.....
T Consensus 79 e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~ 154 (314)
T cd08216 79 PLMAYGSCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKH 154 (314)
T ss_pred eccCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeeccc
Confidence 9999999999997532 3458889999999999999999998 7999999999999999999999999998742211
Q ss_pred ---------------CCCCccccccccCC-CCCCCccceehhhHHHHHHHhCCCCCCCCccchhH-HHHHHhhhc-----
Q 004637 614 ---------------GLESPLRGQYVSNQ-PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLK-LQLETCLAE----- 671 (740)
Q Consensus 614 ---------------~~~~~~~~~~~~~~-~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~-~~~~~~~~~----- 671 (740)
+...+.+||..... ..++.++|||||||++|||++|+.||......... +........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 234 (314)
T cd08216 155 GKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKS 234 (314)
T ss_pred cccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccC
Confidence 11224455554432 35788999999999999999999999754322111 111100000
Q ss_pred -CC---ccccc----ccCccc----cCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 672 -AP---SKLRA----EADPSV----RGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 672 -~~---~~~~~----~~~~~l----~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
.+ ..... ..++.. ...........+.+++.+||+.||++|||++|++++--
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 235 TYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred chhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 00 00000 000000 00112223456789999999999999999999998544
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=286.77 Aligned_cols=245 Identities=19% Similarity=0.239 Sum_probs=183.2
Q ss_pred CCCCCCeeecCCCccEEEEEe----cCCCEEEEEEeeccc----ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~ 522 (740)
+|++.+.||+|+||.||+++. .+++.||||.++... ....+.+.+|++++.++ +||||+++++.+.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~----- 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ----- 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee-----
Confidence 367789999999999999974 357889999987432 23345688999999999 5999999987663
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeE
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl 602 (740)
.+...++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++|
T Consensus 76 ---~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 76 ---TDTKLHLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred ---cCCEEEEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEE
Confidence 34568999999999999999853 3468899999999999999999998 79999999999999999999999
Q ss_pred ecCCCCCCCCC----------CCCCccccccccCC-CCCCCccceehhhHHHHHHHhCCCCCCCCccchh-HHHHHHhhh
Q 004637 603 SGYNIPLPSKK----------GLESPLRGQYVSNQ-PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGL-KLQLETCLA 670 (740)
Q Consensus 603 ~DFGla~~~~~----------~~~~~~~~~~~~~~-~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~-~~~~~~~~~ 670 (740)
+|||+++.... +...+.+||..... ...+.++||||||+++|||+||+.||........ .........
T Consensus 147 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 226 (288)
T cd05583 147 TDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK 226 (288)
T ss_pred EECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc
Confidence 99998754211 22234455554322 2367899999999999999999999964322111 111111111
Q ss_pred cCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhh
Q 004637 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723 (740)
Q Consensus 671 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 723 (740)
..+ ..... ....+.+++.+||+.||++|||+.++.+.|+.
T Consensus 227 ~~~-~~~~~------------~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 227 SKP-PFPKT------------MSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred cCC-CCCcc------------cCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 110 11111 12345689999999999999998887766653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=278.62 Aligned_cols=238 Identities=23% Similarity=0.424 Sum_probs=186.2
Q ss_pred CCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|++|.||+|+.. +++.||+|.+..... ...+.+.+|++++++++|||++++++++. .+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~ 72 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE--------TSD 72 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE--------eCC
Confidence 4778899999999999999854 688999999976543 34467899999999999999999998875 235
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||.+
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 73 SLYIILEYAENGSLRQIIKK---FGPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred EEEEEEecCCCCcHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccc
Confidence 68999999999999999853 3568999999999999999999998 79999999999999999999999999998
Q ss_pred CCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 609 LPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
..... +...+.+||.... ..++.++||||+|+++|||++|+.||............ . .........
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~--~-~~~~~~~~~- 221 (254)
T cd06627 147 TKLNDVSKDDASVVGTPYWMAPEVIEM-SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRI--V-QDDHPPLPE- 221 (254)
T ss_pred eecCCCcccccccccchhhcCHhhhcC-CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH--h-ccCCCCCCC-
Confidence 54332 2223445555433 34678999999999999999999999754321111111 1 111001111
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
.....+.+++.+||..+|++||++.|++.
T Consensus 222 -----------~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 222 -----------GISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -----------CCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 11245669999999999999999999985
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=247.80 Aligned_cols=255 Identities=19% Similarity=0.282 Sum_probs=193.8
Q ss_pred CCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|+..++||+|.||+||||+ .++++.||+|+++..+ +..+....+|+.+++.++|+|||++++... .+.
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlh--------sdk 74 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH--------SDK 74 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc--------cCc
Confidence 46667899999999999999 5668999999998653 445678999999999999999999998653 446
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
.+-+|+|||.. +|..|... -.+.++......++.|+.+||.|+|+ .++.|||+||.|.||+.+|+.|++|||++
T Consensus 75 kltlvfe~cdq-dlkkyfds--lng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 75 KLTLVFEFCDQ-DLKKYFDS--LNGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred eeEEeHHHhhH-HHHHHHHh--cCCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchh
Confidence 68999999976 89888753 45668889999999999999999999 79999999999999999999999999998
Q ss_pred CCCCCCC---------CCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhhcC----Cc
Q 004637 609 LPSKKGL---------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEA----PS 674 (740)
Q Consensus 609 ~~~~~~~---------~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~----~~ 674 (740)
+...... ..|..|....+..-|++..|+||-|||+.|+.. |++.|.+.+.++....+-+..... +.
T Consensus 149 rafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wp 228 (292)
T KOG0662|consen 149 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWP 228 (292)
T ss_pred hhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCC
Confidence 6543221 223344566777788999999999999999996 777788877665444443333221 11
Q ss_pred ccccccCccccCCCcH-----HHH----HHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 675 KLRAEADPSVRGTYAY-----DSL----RTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 675 ~~~~~~~~~l~~~~~~-----~~~----~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.+....|-...+.++. ..+ ..-.+++.+.+.-+|.+|.++++.++.
T Consensus 229 s~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 229 SMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred ccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 2222222111111111 111 123688899999999999999988764
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=270.70 Aligned_cols=265 Identities=18% Similarity=0.230 Sum_probs=194.7
Q ss_pred HhcCCCCCCeeecCCCccEEEEEec---C--CCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeecc
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLT---D--GSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~---~--g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~ 521 (740)
....|+....||+|.||.||+|... + ...+|+|+++... .......-+|+..++.++|||||.+..++..
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~--- 98 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS--- 98 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc---
Confidence 3456888999999999999999632 2 2379999998553 3345678999999999999999999988862
Q ss_pred CCCCCCCceEEEEecccCcchhhhcccc--cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC--
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDW--KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-- 597 (740)
Q Consensus 522 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~-- 597 (740)
.+..+++++||++. +|.+.++-+ .+...++-..+..|+.||+.|+.|||+ .-|+||||||+|||+..+
T Consensus 99 ----~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgp 170 (438)
T KOG0666|consen 99 ----HDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGP 170 (438)
T ss_pred ----cCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCC
Confidence 25679999999998 999988643 234578889999999999999999999 489999999999999877
Q ss_pred --CceeEecCCCCCCCCCC------------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccc----
Q 004637 598 --LTAKLSGYNIPLPSKKG------------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVD---- 659 (740)
Q Consensus 598 --~~~kl~DFGla~~~~~~------------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~---- 659 (740)
|.+||+|||+++..... +-.|.+||...+...|+.+.||||.|||+.||+|-++.|.+.+.+
T Consensus 171 erG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~ 250 (438)
T KOG0666|consen 171 ERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTK 250 (438)
T ss_pred ccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccC
Confidence 89999999999644321 122567888889999999999999999999999998888754321
Q ss_pred ------hhHHHHHHhhhcCCcccccc---cCc-----ccc-CCCcH-------H----HHHHHHHHHHhccccCCCCCCC
Q 004637 660 ------GLKLQLETCLAEAPSKLRAE---ADP-----SVR-GTYAY-------D----SLRTTVEITINCLSKDAAKRPS 713 (740)
Q Consensus 660 ------~~~~~~~~~~~~~~~~~~~~---~~~-----~l~-~~~~~-------~----~~~~~~~li~~cl~~dP~~RPs 713 (740)
++.........+....+... .+- .++ ..+.. + .....++++.+++..||.+|.|
T Consensus 251 ~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIt 330 (438)
T KOG0666|consen 251 NPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRIT 330 (438)
T ss_pred CCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhcc
Confidence 11111111111111111110 000 000 00000 0 0113679999999999999999
Q ss_pred HHHHHHHhhhh
Q 004637 714 IEDVLWNLQYS 724 (740)
Q Consensus 714 ~~evl~~L~~~ 724 (740)
+++++++.-..
T Consensus 331 a~qAleh~yF~ 341 (438)
T KOG0666|consen 331 AEQALEHPYFT 341 (438)
T ss_pred HHHHhcccccc
Confidence 99999876543
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=287.13 Aligned_cols=247 Identities=23% Similarity=0.339 Sum_probs=183.1
Q ss_pred hcCCCCCCeeecCCCccEEEEEecC-CCEEEEEEeecccc-cChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~~ 526 (740)
.++|++.+.||+|+||.||+|+..+ ++.||||.++.... ....++.+|++++.+.. ||||++++++|. .
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~--------~ 85 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFI--------T 85 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeee--------c
Confidence 3567888999999999999999764 89999999975432 23356777888777775 999999999885 3
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
+...++||||+++ ++.+++.. ....+++..+..++.|+++||+|||+. .+|+||||||+||++++++.+||+|||
T Consensus 86 ~~~~~~v~e~~~~-~l~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 86 DSDVFICMELMST-CLDKLLKR--IQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred CCeEEEEeeccCc-CHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccc
Confidence 4568999999864 77776643 234789999999999999999999972 589999999999999999999999999
Q ss_pred CCCCCCC--------CCCCccccccccCC---CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcc
Q 004637 607 IPLPSKK--------GLESPLRGQYVSNQ---PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 607 la~~~~~--------~~~~~~~~~~~~~~---~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
++..... +...+.+||..... ..++.++||||||+++|||++|+.||...... .+............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~ 238 (296)
T cd06618 161 ISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--FEVLTKILQEEPPS 238 (296)
T ss_pred cchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--HHHHHHHhcCCCCC
Confidence 9853221 22234556654432 24678999999999999999999999743211 11111111111101
Q ss_pred cccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 676 ~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
... ......++.+++.+||..||++||++.++++..
T Consensus 239 ~~~----------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 239 LPP----------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred CCC----------CCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 100 001234567999999999999999999998764
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.6e-32 Score=285.63 Aligned_cols=250 Identities=14% Similarity=0.139 Sum_probs=171.8
Q ss_pred cCCCCCCeeecCCCccEEEEEecC----CCEEEEEEeecccccCh-----------hHHHHHHHHHhhccCcccceeece
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQRHLP-----------QSLMQHVELLSKLRHRHLVSILGH 515 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~-----------~~~~~Ei~il~~l~H~nIv~l~g~ 515 (740)
++|.+.++||+|+||+||+|...+ +..+|+|+......... .....+...+..++|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 578999999999999999999544 44666665443221110 112223345566789999999987
Q ss_pred eeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeec
Q 004637 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (740)
Q Consensus 516 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld 595 (740)
+..... .....++++|++.. ++.+.+.. ....++..+..++.|+++||+|||+ .+|+||||||+|||++
T Consensus 92 ~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~ 160 (294)
T PHA02882 92 GSFKRC----RMYYRFILLEKLVE-NTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVD 160 (294)
T ss_pred eeEecC----CceEEEEEEehhcc-CHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEc
Confidence 643211 12345788888754 66666632 2335788889999999999999998 7999999999999999
Q ss_pred CCCceeEecCCCCCCCC----------------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCcc-
Q 004637 596 KALTAKLSGYNIPLPSK----------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEV- 658 (740)
Q Consensus 596 ~~~~~kl~DFGla~~~~----------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~- 658 (740)
.++.+||+|||+++... .++..+.+++.. ....++.++|||||||++|||++|+.||.....
T Consensus 161 ~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~-~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~ 239 (294)
T PHA02882 161 GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAH-NGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHN 239 (294)
T ss_pred CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHh-CCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccc
Confidence 99999999999985321 123334444433 355678999999999999999999999986532
Q ss_pred chhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 659 DGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.............. +. .+... ...+...+.+++..|+..+|++||++.++.+.+
T Consensus 240 ~~~~~~~~~~~~~~---~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 240 GNLIHAAKCDFIKR---LH---EGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hHHHHHhHHHHHHH---hh---hhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 22211111111000 00 00000 011235677999999999999999999999876
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-32 Score=292.92 Aligned_cols=257 Identities=15% Similarity=0.206 Sum_probs=186.8
Q ss_pred CCCCCCeeecCCCccEEEEEec-C--CCEEEEEEeeccc--ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-D--GSRVSVKCLKLKQ--RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~--g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~ 525 (740)
+|++.+.||+|+||.||+|+.. + +..||+|++.... ....+.+.+|+++++++ +||||+++++++.... .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----~ 76 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP----G 76 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc----c
Confidence 4777889999999999999954 4 7799999987432 22345788999999999 5999999998764221 1
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.....++++||+. ++|.+++. ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 77 ~~~~~~~~~e~~~-~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 77 NFNELYLYEELME-ADLHQIIR---SGQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred cCCcEEEEEeccc-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcC
Confidence 2345789999996 58999884 34568999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCC-------------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcC
Q 004637 606 NIPLPSK-------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 606 Gla~~~~-------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
|+++... .++..+.+||.......++.++|||||||++|||++|+.||...+.......+.......
T Consensus 150 g~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 229 (332)
T cd07857 150 GLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTP 229 (332)
T ss_pred CCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCC
Confidence 9985322 122335566665544567889999999999999999999998654333222222211111
Q ss_pred Cccc-ccccC---------------ccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 673 PSKL-RAEAD---------------PSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 673 ~~~~-~~~~~---------------~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+... ....+ ..+. .........+.+++.+|++.||++|||+.|++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 230 DEETLSRIGSPKAQNYIRSLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred CHHHHHhhhhhhHHHHHHhccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 1000 00000 0000 0001123467799999999999999999999865
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-32 Score=282.38 Aligned_cols=235 Identities=18% Similarity=0.264 Sum_probs=180.3
Q ss_pred eecCCCccEEEEEec-CCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEE
Q 004637 459 IGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (740)
Q Consensus 459 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~ 534 (740)
||+|+||.||+|+.. +|+.||+|.+..... ...+.+.+|++++++++||||+++++.+. .+...|+||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------~~~~~~lv~ 72 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ--------GKKNLYLVM 72 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee--------cCcEEEEEE
Confidence 689999999999965 489999999875432 34467889999999999999999998764 456689999
Q ss_pred ecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCCC
Q 004637 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKG 614 (740)
Q Consensus 535 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 614 (740)
||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++||||+|+||++++++.+||+|||++......
T Consensus 73 e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 73 EYLPGGDLASLLEN---VGSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 99999999999964 3368999999999999999999998 79999999999999999999999999987532211
Q ss_pred -----------------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc
Q 004637 615 -----------------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 615 -----------------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
...+.+||... ...++.++||||||+++||+++|+.||...........+.......+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---- 221 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVIL-GQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWP---- 221 (265)
T ss_pred cccccccccccccCcccCccccCHHHhc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCC----
Confidence 12234444443 33467899999999999999999999986554433332221111110
Q ss_pred cccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 678 ~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
... .....+.+++.+||+.+|++|||+.++.+.|+
T Consensus 222 ~~~----------~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 222 EDV----------EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred ccc----------cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 000 01345679999999999999999955544443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.2e-32 Score=288.00 Aligned_cols=245 Identities=23% Similarity=0.278 Sum_probs=185.1
Q ss_pred CCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.|+..+.||+|+||.||+|+. .+++.||+|.+.... ....+++.+|+++++.++|+|++++++++. .+
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~ 87 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL--------RE 87 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEE--------cC
Confidence 366678899999999999995 468899999987432 222356788999999999999999999885 23
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
...++||||+. |++.+++.. ....+++.++..++.|++.|+.|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 88 ~~~~lv~e~~~-~~l~~~~~~--~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~ 161 (308)
T cd06634 88 HTAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGS 161 (308)
T ss_pred CeeEEEEEccC-CCHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCccc
Confidence 45899999997 588877753 23458899999999999999999998 7999999999999999999999999998
Q ss_pred CCCCCC-----CCCCcccccccc--CCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 608 PLPSKK-----GLESPLRGQYVS--NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 608 a~~~~~-----~~~~~~~~~~~~--~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
+..... +...+.+||... ....++.++|||||||++|||++|+.||...........+.. ...+...
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~--~~~~~~~---- 235 (308)
T cd06634 162 ASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NESPALQ---- 235 (308)
T ss_pred ceeecCcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhh--cCCCCcC----
Confidence 754322 233455666643 224567899999999999999999999875432221111111 0110000
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
.......+.+++.+||+.+|++||++.++++.....
T Consensus 236 --------~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~ 271 (308)
T cd06634 236 --------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL 271 (308)
T ss_pred --------cccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccc
Confidence 111224566999999999999999999999875543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-32 Score=295.96 Aligned_cols=262 Identities=16% Similarity=0.260 Sum_probs=190.7
Q ss_pred HhcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecc--cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
..++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++.+++.... ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 90 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS--SLE 90 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc--ccc
Confidence 4578999999999999999999964 5889999998643 2223456788999999999999999998764211 112
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.....++|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~df 162 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDF 162 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccc
Confidence 334589999999 5699998842 468999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCCC------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 606 NIPLPSKK------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 606 Gla~~~~~------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
|++..... ++..+.+||.......++.++|||||||++|||+||+.||...........+.......+..+...
T Consensus 163 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (343)
T cd07851 163 GLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQK 242 (343)
T ss_pred cccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Confidence 99864432 222345566554444678899999999999999999999976544332222211111111000000
Q ss_pred c------------CccccCCCc---HHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 680 A------------DPSVRGTYA---YDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~------------~~~l~~~~~---~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
. ...-...+. ......+.+++.+|+..||++|||+.||++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0 000000000 0124567899999999999999999999874
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.2e-32 Score=279.53 Aligned_cols=242 Identities=21% Similarity=0.298 Sum_probs=189.2
Q ss_pred CCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|+||.||+++ ..+++.+|+|.+.... .....++.+|++++++++|+||+++++++. .+.
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~ 72 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL--------DGN 72 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc--------cCC
Confidence 47788999999999999998 4468899999987543 233457789999999999999999998775 336
Q ss_pred ceEEEEecccCcchhhhccccc-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
..++||||+++++|.+++.... ....+++..+..++.|++.||+|||+ .+++|+||||+||++++++.+|++|||+
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~ 149 (256)
T cd08530 73 KLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGI 149 (256)
T ss_pred EEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccc
Confidence 6899999999999999986422 23568999999999999999999998 7999999999999999999999999998
Q ss_pred CCCCCC-------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccccc
Q 004637 608 PLPSKK-------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 608 a~~~~~-------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
+..... +...+.+||+.. ...++.++|+||||+++|||++|+.||...+.......+.. .. ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~Pe~~~-~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~---~~---~~--- 219 (256)
T cd08530 150 SKVLKKNMAKTQIGTPHYMAPEVWK-GRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR---GK---YP--- 219 (256)
T ss_pred hhhhccCCcccccCCccccCHHHHC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC---CC---
Confidence 854322 223344455543 45567899999999999999999999986554333222211 11 00
Q ss_pred CccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 681 ~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
..+......+.+++.+|+..+|++||++.|+++.
T Consensus 220 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 220 ------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred ------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0111223457799999999999999999999864
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.1e-33 Score=271.05 Aligned_cols=248 Identities=21% Similarity=0.315 Sum_probs=194.5
Q ss_pred CHHHHHHHhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhcc-Ccccceeeceeeee
Q 004637 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILT 519 (740)
Q Consensus 442 ~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~ 519 (740)
+++|+-+.| .+.||+|+|+.|--++ +.+|..+|||++.+.......++.+|++++...+ |+||++++.+|.
T Consensus 74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE-- 146 (463)
T KOG0607|consen 74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFE-- 146 (463)
T ss_pred hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhc--
Confidence 356766666 4789999999999988 7889999999999887777789999999999995 999999998874
Q ss_pred ccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC-
Q 004637 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL- 598 (740)
Q Consensus 520 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~- 598 (740)
++..+|||||-|.||.|..+++ +...+++.+..++..+||.||.|||. ++|.|||+||+|||-.+..
T Consensus 147 ------dd~~FYLVfEKm~GGplLshI~---~~~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~ 214 (463)
T KOG0607|consen 147 ------DDTRFYLVFEKMRGGPLLSHIQ---KRKHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNK 214 (463)
T ss_pred ------ccceEEEEEecccCchHHHHHH---HhhhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCC
Confidence 5667999999999999999995 35568999999999999999999999 8999999999999986544
Q ss_pred --ceeEecCCCCCC----------------CCCCCCCccccccc----cCCCCCCCccceehhhHHHHHHHhCCCCCCCC
Q 004637 599 --TAKLSGYNIPLP----------------SKKGLESPLRGQYV----SNQPGDGAKEDVYQLGVILLQVITGKQVKSTS 656 (740)
Q Consensus 599 --~~kl~DFGla~~----------------~~~~~~~~~~~~~~----~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~ 656 (740)
-+|||||.++.- ...|...+++||.+ -....|+.++|.||+|||+|-|+.|.+||.+.
T Consensus 215 vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 215 VSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred cCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence 489999977521 12244446666543 22346789999999999999999999999854
Q ss_pred ccc---------------hhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 657 EVD---------------GLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 657 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
-.. .+.+.+.....+.|++ .......+..+++...+..|+.+|-++.+++..
T Consensus 295 Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdk------------dWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 295 CGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDK------------DWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred cCCcCCccCCCccHHHHHHHHHHHhccCCcCChh------------hhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 211 1222222222222221 122344566799999999999999999999883
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.6e-33 Score=270.05 Aligned_cols=247 Identities=20% Similarity=0.252 Sum_probs=191.5
Q ss_pred HhcCCCCC-CeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCC
Q 004637 449 ATNNFDPT-NLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 449 ~~~~f~~~-~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~ 525 (740)
.+++|++. ++||-|-.|.|..+. ..+++.+|+|++... ....+|++..-.. .|||||.++++|...++
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~---- 129 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQ---- 129 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhcc----
Confidence 45677654 678999999999998 457899999998633 4567888876655 59999999998864443
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeec---CCCceeE
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD---KALTAKL 602 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld---~~~~~kl 602 (740)
....+.+|||.|+||.|...+.+ +....+++++.-.|+.||+.|++|||+ .+|.||||||+|+|.. .+..+||
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~-~g~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQD-RGDQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred CceeeEeeeecccchHHHHHHHH-cccccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEe
Confidence 46778999999999999999976 455679999999999999999999999 8999999999999996 4567999
Q ss_pred ecCCCCCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchh----HHHHHHhhh
Q 004637 603 SGYNIPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGL----KLQLETCLA 670 (740)
Q Consensus 603 ~DFGla~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~----~~~~~~~~~ 670 (740)
+|||+|+.... -+..|.+| ++.+...|+..+|+||+||++|-|+.|.+||+......+ ...+.....
T Consensus 206 tDfGFAK~t~~~~~L~TPc~TPyYvaP-evlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy 284 (400)
T KOG0604|consen 206 TDFGFAKETQEPGDLMTPCFTPYYVAP-EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQY 284 (400)
T ss_pred cccccccccCCCccccCCcccccccCH-HHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCc
Confidence 99999976542 12233344 444556688999999999999999999999986544322 222322222
Q ss_pred cCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 671 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
+.| ........+...++|.++|..+|.+|.|+.|+++.-
T Consensus 285 ~FP------------~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp 323 (400)
T KOG0604|consen 285 EFP------------EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP 323 (400)
T ss_pred cCC------------ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc
Confidence 222 112233455677999999999999999999998753
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=285.15 Aligned_cols=240 Identities=23% Similarity=0.314 Sum_probs=183.4
Q ss_pred CCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
|...+.||+|+||+||+|+. .+++.||+|++..... ...+.+.+|++++++++|||++++++++. ++.
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~ 94 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL--------KEH 94 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE--------eCC
Confidence 55568899999999999985 4688999999875432 22356788999999999999999999885 235
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..|+||||+. |++.+++.. ....+++.++..++.|++.|++|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 95 ~~~lv~e~~~-~~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 95 TAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred EEEEEEecCC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCC
Confidence 5899999996 588877753 34568999999999999999999998 79999999999999999999999999987
Q ss_pred CCCC-----CCCCCccccccccC--CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccC
Q 004637 609 LPSK-----KGLESPLRGQYVSN--QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEAD 681 (740)
Q Consensus 609 ~~~~-----~~~~~~~~~~~~~~--~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (740)
.... .+...+.+||.... ...++.++|||||||++|||++|+.||...+.......... ...+. ...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~--~~~~~----~~~ 242 (313)
T cd06633 169 SKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NDSPT----LQS 242 (313)
T ss_pred cccCCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh--cCCCC----CCc
Confidence 5332 22334566666532 34577899999999999999999999875543222222111 11110 001
Q ss_pred ccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 682 PSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 682 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
......+.+++.+||+.+|++||++.+++..
T Consensus 243 --------~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 243 --------NEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --------cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0112346689999999999999999999975
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9e-32 Score=281.39 Aligned_cols=254 Identities=20% Similarity=0.289 Sum_probs=188.8
Q ss_pred CCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 453 FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++|+||+++++++. ..+.
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~~~~ 72 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH--------TERK 72 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh--------cCCc
Confidence 556788999999999999954 58999999998653 334567889999999999999999999875 3356
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||++ ++|.+++... ...+++..+..++.|+++||+|||+ .+|+||||+|+||++++++.+||+|||.+.
T Consensus 73 ~~~v~e~~~-~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 73 LYLVFEYCD-MDLKKYLDKR--PGPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred eEEEecCcC-cCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCccc
Confidence 899999998 5999999642 2468999999999999999999999 699999999999999999999999999985
Q ss_pred CCCCC---------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccc---
Q 004637 610 PSKKG---------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR--- 677 (740)
Q Consensus 610 ~~~~~---------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 677 (740)
..... ...+.+||.......++.++|||||||++|||++|+.||...........+............
T Consensus 147 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07829 147 AFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGV 226 (282)
T ss_pred ccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhh
Confidence 43221 122455666554446788999999999999999999999765543332222211111100000
Q ss_pred -cc--cC---ccccCCC----cHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 678 -AE--AD---PSVRGTY----AYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 -~~--~~---~~l~~~~----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.. .+ +...... .......+.+++.+||+.||++||++.|++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 227 TKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00 00 0000000 00113567899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=275.14 Aligned_cols=242 Identities=20% Similarity=0.285 Sum_probs=189.3
Q ss_pred CCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc--cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|++.+.||+|+||.||++... +++.||+|++..... ...+.+.+|++++++++|||++++++.+. .+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~--------~~~ 72 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE--------EKG 72 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe--------cCC
Confidence 4778899999999999999954 688999999976533 44567889999999999999999998775 235
Q ss_pred ceEEEEecccCcchhhhccccc-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
..++|+||+++++|.+++.... ....+++..+..++.+++.||+|||+ .+++|+||+|+||+++.++.++|+|||.
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~ 149 (258)
T cd08215 73 KLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGI 149 (258)
T ss_pred EEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccc
Confidence 6899999999999999996522 23678999999999999999999998 6999999999999999999999999999
Q ss_pred CCCCCCC---------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 608 PLPSKKG---------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 608 a~~~~~~---------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
+...... ...+.+||... ...++.++||||+|++++||++|+.||...+......... ......+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~pe~~~-~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~ 225 (258)
T cd08215 150 SKVLSSTVDLAKTVVGTPYYLSPELCQ-NKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKIL---KGQYPPIPS 225 (258)
T ss_pred eeecccCcceecceeeeecccChhHhc-cCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHh---cCCCCCCCC
Confidence 8543221 22234444433 3456789999999999999999999997655333222221 111111111
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
.....+.+++.+||..+|++||++.|+++.
T Consensus 226 ------------~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 226 ------------QYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred ------------CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 123456799999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-32 Score=281.09 Aligned_cols=239 Identities=20% Similarity=0.267 Sum_probs=191.9
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
+.|..-++||+|+||.||-++. .+|+.+|.|++.++. .+...-.++|-++|.+++.+.||.+-..| ++
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf--------eT 256 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF--------ET 256 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee--------cC
Confidence 5578889999999999999984 569999999986542 33445678899999999999999886433 36
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
.+.+|+|+..|.||+|.-+|.+.. ...+++...+.++.+|+-||++||. .+||.||+||+|||+|+.|+++|+|.|
T Consensus 257 kd~LClVLtlMNGGDLkfHiyn~g-~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLG 332 (591)
T KOG0986|consen 257 KDALCLVLTLMNGGDLKFHIYNHG-NPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLG 332 (591)
T ss_pred CCceEEEEEeecCCceeEEeeccC-CCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccc
Confidence 677999999999999999987643 3569999999999999999999999 799999999999999999999999999
Q ss_pred CCCCC--------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccccc
Q 004637 607 IPLPS--------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 607 la~~~--------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
+|... ..|+..|++||.+..+. |+...|.||+||++|||+.|+.||.......-.+-+.+.....+.+..+
T Consensus 333 LAvei~~g~~~~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~ 411 (591)
T KOG0986|consen 333 LAVEIPEGKPIRGRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSD 411 (591)
T ss_pred eEEecCCCCccccccCcccccCHHHHcCCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhccc
Confidence 98432 35677788998877554 9999999999999999999999998655444443444444443333333
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCH
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSI 714 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~ 714 (740)
.+. ++..+|....+++||++|--.
T Consensus 412 kFS------------~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 412 KFS------------EEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred ccC------------HHHHHHHHHHHccCHHHhccC
Confidence 333 344578888999999999643
|
|
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-31 Score=278.87 Aligned_cols=259 Identities=19% Similarity=0.268 Sum_probs=185.1
Q ss_pred CCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc--cChhHHHHHHHHHhhc---cCcccceeeceeeeeccCCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKL---RHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l---~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
|++.+.||+|+||.||+|+.+ +++.||+|+++.... .....+.+|+++++++ +||||+++++++..... ..
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~---~~ 77 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT---DR 77 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC---CC
Confidence 567889999999999999965 489999999975422 2234567788877766 59999999999864321 12
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
....+++|||+.+ +|.+++... ....+++..+..++.|+++||+|||+ .+++|+||||+||+++.++.+||+|||
T Consensus 78 ~~~~~l~~e~~~~-~l~~~l~~~-~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 78 ELKLTLVFEHVDQ-DLATYLSKC-PKPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred CceeEEEehhccc-CHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccC
Confidence 3358999999975 898888642 22358999999999999999999999 799999999999999999999999999
Q ss_pred CCCCCCC--------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhh-cCCcccc
Q 004637 607 IPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA-EAPSKLR 677 (740)
Q Consensus 607 la~~~~~--------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~ 677 (740)
.+..... +...+.+||... ...++.++|||||||++|||++|++||......+....+..... .......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~PE~~~-~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 153 LARIYSFEMALTSVVVTLWYRAPEVLL-QSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred cceeccCCcccccccccccccChHHhc-cCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcC
Confidence 8854322 122244555544 34578899999999999999999999986543332222211110 0000000
Q ss_pred -------cccCcccc---CCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 678 -------AEADPSVR---GTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 -------~~~~~~l~---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
........ .....+....+.+++.+||+.||++||++.|++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 00000000 00111234567799999999999999999999853
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-32 Score=282.40 Aligned_cols=238 Identities=20% Similarity=0.276 Sum_probs=184.7
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeeccc---ccChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~ 525 (740)
++|.+.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++ ||||+++++++.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-------- 72 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-------- 72 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc--------
Confidence 4688899999999999999995 478999999987532 223467889999999998 999999998774
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.++..++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.++++||
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 73 DEENLYFVLEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred CCceEEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCC
Confidence 34568999999999999999953 3469999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCCCCC-----------------------------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCC
Q 004637 606 NIPLPSKKG-----------------------------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTS 656 (740)
Q Consensus 606 Gla~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~ 656 (740)
|++...... ...+.+||... ...++.++||||||++++|+++|+.||...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 225 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN-EKPAGKSSDLWALGCIIYQMLTGKPPFRGS 225 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhC-CCCCChhhhHHHHHHHHHHHHhCCCCCCCc
Confidence 987533211 12233334332 344678999999999999999999999865
Q ss_pred ccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCH----HHHHH
Q 004637 657 EVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSI----EDVLW 719 (740)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~----~evl~ 719 (740)
........+..... .... .....+.+++.+||+.+|++||++ +|+++
T Consensus 226 ~~~~~~~~~~~~~~----~~~~------------~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 226 NEYLTFQKILKLEY----SFPP------------NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred cHHHHHHHHHhcCC----CCCC------------ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 43222222111100 1111 113456699999999999999999 77765
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-32 Score=304.44 Aligned_cols=260 Identities=17% Similarity=0.202 Sum_probs=173.7
Q ss_pred HHhcCCCCCCeeecCCCccEEEEEecC--CCEEEEEEe--------------ec---ccccChhHHHHHHHHHhhccCcc
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGFLTD--GSRVSVKCL--------------KL---KQRHLPQSLMQHVELLSKLRHRH 508 (740)
Q Consensus 448 ~~~~~f~~~~~iG~G~fg~Vy~~~~~~--g~~vAvK~l--------------~~---~~~~~~~~~~~Ei~il~~l~H~n 508 (740)
...++|++.+.||+|+||+||+|..+. +..+++|.+ .. ........+.+|++++++++|||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 356789999999999999999987532 222222211 00 11122356889999999999999
Q ss_pred cceeeceeeeeccCCCCCCCceEEEEecccCcchhhhccccc--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecC
Q 004637 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK--KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (740)
Q Consensus 509 Iv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD 586 (740)
||++++++. ..+..|+|+|++. ++|.+++.... ............|+.|++.||+|||+ .+|||||
T Consensus 225 Iv~l~~~~~--------~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrD 292 (501)
T PHA03210 225 ILKIEEILR--------SEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRD 292 (501)
T ss_pred cCcEeEEEE--------ECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCC
Confidence 999999885 2345799999996 47877764321 11223455677899999999999998 7999999
Q ss_pred CCCCceeecCCCceeEecCCCCCCCC----------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCC-CCC
Q 004637 587 LKTENILLDKALTAKLSGYNIPLPSK----------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQV-KST 655 (740)
Q Consensus 587 lKp~NILld~~~~~kl~DFGla~~~~----------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p-~~~ 655 (740)
|||+|||++.++.+||+|||+++... .++..+.+||... ...++.++|||||||++|||++|+.+ +..
T Consensus 293 LKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ell~~~~~p~~~ 371 (501)
T PHA03210 293 IKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILA-GDGYCEITDIWSCGLILLDMLSHDFCPIGD 371 (501)
T ss_pred CCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhc-CCCCCcHHHHHHHHHHHHHHHHCCCCCccC
Confidence 99999999999999999999985432 2344455666654 45678999999999999999998854 432
Q ss_pred Cccc---hhHHHHHHhh---hcCCc---ccccccCcc-c---cCCCc-----HHHHHHHHHHHHhccccCCCCCCCHHHH
Q 004637 656 SEVD---GLKLQLETCL---AEAPS---KLRAEADPS-V---RGTYA-----YDSLRTTVEITINCLSKDAAKRPSIEDV 717 (740)
Q Consensus 656 ~~~~---~~~~~~~~~~---~~~~~---~~~~~~~~~-l---~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~ev 717 (740)
.... .+...+.... .+.+. ++.+.++.. + ..... ......+.+++.+|++.||++|||+.|+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~el 451 (501)
T PHA03210 372 GGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAEL 451 (501)
T ss_pred CCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHH
Confidence 2211 1111111100 00110 000000000 0 00000 0112345678999999999999999999
Q ss_pred HHH
Q 004637 718 LWN 720 (740)
Q Consensus 718 l~~ 720 (740)
+++
T Consensus 452 L~h 454 (501)
T PHA03210 452 LAL 454 (501)
T ss_pred hhC
Confidence 975
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=304.46 Aligned_cols=253 Identities=20% Similarity=0.326 Sum_probs=196.3
Q ss_pred HHHHhcCCCCCCeeecCCCccEEEEEec----C----CCEEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeece
Q 004637 446 IEEATNNFDPTNLIGEGSQGQLYKGFLT----D----GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGH 515 (740)
Q Consensus 446 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~----~----g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~ 515 (740)
++...++.++.+.+|+|.||.|++|... . ...||||.++... ....+.+..|+++|+.+ +|+||+.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 3444455566679999999999999832 1 4579999998553 34457899999999999 59999999999
Q ss_pred eeeeccCCCCCCCceEEEEecccCcchhhhccccc------CC-------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 004637 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK------KK-------DMLKWPQRMAIIIGATRGVQFLHTGVAPGI 582 (740)
Q Consensus 516 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~------~~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 582 (740)
|.. ++..++|+||++.|+|.++++..+ .. ..++....+.++.|||.|++||++ .++
T Consensus 371 ~t~--------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~ 439 (609)
T KOG0200|consen 371 CTQ--------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPC 439 (609)
T ss_pred ecc--------CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCc
Confidence 962 456899999999999999997644 00 248889999999999999999999 799
Q ss_pred eecCCCCCceeecCCCceeEecCCCCCCCCC-------C-----CCCccccccccCCCCCCCccceehhhHHHHHHHh-C
Q 004637 583 FGNNLKTENILLDKALTAKLSGYNIPLPSKK-------G-----LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-G 649 (740)
Q Consensus 583 iHrDlKp~NILld~~~~~kl~DFGla~~~~~-------~-----~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G 649 (740)
|||||..+|||+.++..+||+|||+|+.... + ....+++|-.. ...|+.|+|||||||+|||++| |
T Consensus 440 vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~-~~~ft~kSDVWSfGI~L~EifsLG 518 (609)
T KOG0200|consen 440 VHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLF-DRVFTSKSDVWSFGILLWEIFTLG 518 (609)
T ss_pred cchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhc-cCcccccchhhHHHHHHHHHhhCC
Confidence 9999999999999999999999999973211 1 11144555444 4788999999999999999999 7
Q ss_pred CCCCCCCc-cchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhh
Q 004637 650 KQVKSTSE-VDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSI 725 (740)
Q Consensus 650 ~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 725 (740)
..|+.+.. ..++.+.++... +...+..+..++.++|..||+.+|++||++.|+.+.++...
T Consensus 519 ~~PYp~~~~~~~l~~~l~~G~---------------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 519 GTPYPGIPPTEELLEFLKEGN---------------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCCCCCCCcHHHHHHHHhcCC---------------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 88887632 222222222111 11223445567889999999999999999999999998853
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-32 Score=266.36 Aligned_cols=240 Identities=20% Similarity=0.253 Sum_probs=192.4
Q ss_pred hcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
.++|+..++||+|.||.|..++ ..+++.+|+|++++.- ......-..|-++|+..+||.+..+...+ +
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF--------Q 238 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF--------Q 238 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh--------c
Confidence 4667788999999999999998 5679999999998652 22334556788999999999999876433 4
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
..+++|+||||+.||.|.-+|. ....+++.....+-..|..||.|||+ .+||.||+|.+|.|+|++|++||+||
T Consensus 239 t~drlCFVMeyanGGeLf~HLs---rer~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 239 TQDRLCFVMEYANGGELFFHLS---RERVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred cCceEEEEEEEccCceEeeehh---hhhcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeec
Confidence 6678999999999999999984 45668888888999999999999999 79999999999999999999999999
Q ss_pred CCCCC---------CCCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 606 NIPLP---------SKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 606 Gla~~---------~~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|+.+. .-.|++.|.+||... ...|+.++|.|.+||+||||+.|+.||+..+.+.+.+.+...-...|..+
T Consensus 313 GLCKE~I~~g~t~kTFCGTPEYLAPEVle-DnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~l 391 (516)
T KOG0690|consen 313 GLCKEEIKYGDTTKTFCGTPEYLAPEVLE-DNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTL 391 (516)
T ss_pred ccchhcccccceeccccCChhhcCchhhc-cccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccC
Confidence 99753 223555566666543 56788999999999999999999999998887777776654433333222
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCC-----CHHHHHHH
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 720 (740)
. .+...++...+.+||.+|. .+.||.+.
T Consensus 392 s----------------~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 392 S----------------PEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred C----------------HHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 1 2344788899999999994 56666653
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=274.60 Aligned_cols=241 Identities=22% Similarity=0.255 Sum_probs=180.3
Q ss_pred CCCCCCeeecCCCccEEEEEec-CCCEEEEEEeeccc-----ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-----RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
+|.+.+.||+|+||.||+++.. .+..+++|.++... .....++.+|+.++++++||||+++++++.
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 72 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFL-------- 72 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHh--------
Confidence 4788899999999999999854 34556666665321 122345778999999999999999999874
Q ss_pred CCCceEEEEecccCcchhhhcccc-cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
.....++||||+++++|.+++... .....+++..++.++.|+++||.|||+ .+++|+||||+||++++ +.+||+|
T Consensus 73 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d 148 (260)
T cd08222 73 ERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGD 148 (260)
T ss_pred cCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecc
Confidence 334589999999999999988642 234568999999999999999999998 79999999999999975 5699999
Q ss_pred CCCCCCCCC---------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcc
Q 004637 605 YNIPLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 605 FGla~~~~~---------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
||.+..... +...+.+||... ...++.++||||||+++|||++|..||....... ..........
T Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~-- 222 (260)
T cd08222 149 FGVSRLLMGSCDLATTFTGTPYYMSPEALK-HQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS---VVLRIVEGPT-- 222 (260)
T ss_pred cCceeecCCCcccccCCCCCcCccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHHcCCC--
Confidence 998754321 222344555543 4456789999999999999999999997543222 1111111111
Q ss_pred cccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 ~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+. .+......+.+++.+||..+|++||++.|+++.
T Consensus 223 ------~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 223 ------PS----LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred ------CC----CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 11 112233467799999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-31 Score=268.85 Aligned_cols=227 Identities=23% Similarity=0.302 Sum_probs=176.4
Q ss_pred eecCCCccEEEEEec-CCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEE
Q 004637 459 IGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (740)
Q Consensus 459 iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~ 534 (740)
||+|+||.||++... +++.+|+|.++.... .....+.+|++++++++||||+++++.+. .+...++||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~~~v~ 72 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ--------TEEKLYLVL 72 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee--------cCCeeEEEE
Confidence 699999999999954 589999999875432 23457899999999999999999998763 456689999
Q ss_pred ecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCC-
Q 004637 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK- 613 (740)
Q Consensus 535 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~- 613 (740)
||+++++|.+++.. ...+++.....++.|+++|+.|||+ .+++|+||||+||+++.++.++|+|||.+.....
T Consensus 73 e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 73 EYAPGGELFSHLSK---EGRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred ecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 99999999999953 3468999999999999999999998 7999999999999999999999999999854322
Q ss_pred --------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCcccc
Q 004637 614 --------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVR 685 (740)
Q Consensus 614 --------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 685 (740)
+...+.+||... ....+.++|+||||+++||+++|+.||...+.......+.. ....+...
T Consensus 147 ~~~~~~~~~~~~~~~Pe~~~-~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~------ 215 (250)
T cd05123 147 GSRTNTFCGTPEYLAPEVLL-GKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK----DPLRFPEF------ 215 (250)
T ss_pred CCcccCCcCCccccChHHhC-CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc----CCCCCCCC------
Confidence 122334444433 34467889999999999999999999976543222222211 10011111
Q ss_pred CCCcHHHHHHHHHHHHhccccCCCCCCCHHH
Q 004637 686 GTYAYDSLRTTVEITINCLSKDAAKRPSIED 716 (740)
Q Consensus 686 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~e 716 (740)
....+.+++.+||..||++||++.+
T Consensus 216 ------~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 216 ------LSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred ------CCHHHHHHHHHHhcCCHhhCCCccc
Confidence 1245669999999999999999943
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-31 Score=303.94 Aligned_cols=146 Identities=19% Similarity=0.321 Sum_probs=127.0
Q ss_pred hcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccc---cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~ 525 (740)
.++|.+.+.||+|+||+||+|+.. +++.||||+++.... .....+.+|+.+++.++||||+++++++.
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-------- 74 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ-------- 74 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE--------
Confidence 367888999999999999999954 689999999975432 22357889999999999999999997764
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
.....|+||||+++|+|.+++.. ...+++..++.|+.||+.||+|||. .+||||||||+|||++.++.+||+||
T Consensus 75 ~~~~~~lVmEy~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DF 148 (669)
T cd05610 75 SANNVYLVMEYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDF 148 (669)
T ss_pred ECCEEEEEEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeC
Confidence 34568999999999999999953 3458889999999999999999998 69999999999999999999999999
Q ss_pred CCCC
Q 004637 606 NIPL 609 (740)
Q Consensus 606 Gla~ 609 (740)
|+++
T Consensus 149 Gls~ 152 (669)
T cd05610 149 GLSK 152 (669)
T ss_pred CCCc
Confidence 9874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=300.50 Aligned_cols=250 Identities=18% Similarity=0.216 Sum_probs=194.1
Q ss_pred HHHHHHhcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecc---cccChhHHHHHHHHHhhccCcccceeeceeeee
Q 004637 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILT 519 (740)
Q Consensus 444 ~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~ 519 (740)
.++.-..++|++.++||+|+||.|..++. .+++.||+|++.+- .......|..|-.+|..-+.+-||.+.-.|
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF--- 144 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF--- 144 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh---
Confidence 45555678899999999999999999995 56889999999863 334456789999999999999999987544
Q ss_pred ccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCc
Q 004637 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (740)
Q Consensus 520 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~ 599 (740)
.+..++|+|||||+||+|-.++.+ ...+++.-...|+..|.-||.-||+ .|+|||||||+|||||..|+
T Consensus 145 -----QD~~~LYlVMdY~pGGDlltLlSk---~~~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GH 213 (1317)
T KOG0612|consen 145 -----QDERYLYLVMDYMPGGDLLTLLSK---FDRLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGH 213 (1317)
T ss_pred -----cCccceEEEEecccCchHHHHHhh---cCCChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCc
Confidence 366789999999999999999954 3468888899999999999999999 89999999999999999999
Q ss_pred eeEecCCCCCC----------CCCCCCCccccccccC----CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHH
Q 004637 600 AKLSGYNIPLP----------SKKGLESPLRGQYVSN----QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQL 665 (740)
Q Consensus 600 ~kl~DFGla~~----------~~~~~~~~~~~~~~~~----~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~ 665 (740)
+||+|||.+.. ...|++.|..||.... ...|+..+|.||+||++|||+.|..||+.+...+....+
T Consensus 214 ikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KI 293 (1317)
T KOG0612|consen 214 IKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKI 293 (1317)
T ss_pred EeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHH
Confidence 99999997632 3456777888876532 257899999999999999999999999976544433333
Q ss_pred HHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCC---HHHHHHH
Q 004637 666 ETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS---IEDVLWN 720 (740)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs---~~evl~~ 720 (740)
....... .+++.+ +...+..+||.+.+. +|+.|.. ++++-.+
T Consensus 294 m~hk~~l--~FP~~~----------~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 294 MNHKESL--SFPDET----------DVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred hchhhhc--CCCccc----------ccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 2221111 111111 123455678877554 5788876 7777654
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=287.82 Aligned_cols=258 Identities=20% Similarity=0.350 Sum_probs=207.3
Q ss_pred CHHHHHHHhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhc-cCcccceeeceeeee
Q 004637 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (740)
Q Consensus 442 ~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~ 519 (740)
.++.+...++.|++.+.||+|.+|.||+++ .++++.+|||++..... ..+++..|.++++.. .|||++.+||++...
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 344555667889999999999999999999 67799999999876543 346788899999988 699999999998755
Q ss_pred ccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCc
Q 004637 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (740)
Q Consensus 520 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~ 599 (740)
.. ..++.+|||||||.+|+.-|++++.. ...+.|..+..|++.+++|+++||. ..+||||||-.|||++.++.
T Consensus 89 ~~---~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~ 161 (953)
T KOG0587|consen 89 DP---GNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAE 161 (953)
T ss_pred cC---CCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCc
Confidence 43 46788999999999999999998754 6779999999999999999999999 59999999999999999999
Q ss_pred eeEecCCCCCC---------CCCCCCCccccccccCC----CCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHH
Q 004637 600 AKLSGYNIPLP---------SKKGLESPLRGQYVSNQ----PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLE 666 (740)
Q Consensus 600 ~kl~DFGla~~---------~~~~~~~~~~~~~~~~~----~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~ 666 (740)
+|+.|||.+.. +..|+..+++||..... ..|+.++|+||+|++..||.-|.+|+....... ....
T Consensus 162 VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr--aLF~ 239 (953)
T KOG0587|consen 162 VKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR--ALFL 239 (953)
T ss_pred EEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh--hhcc
Confidence 99999999743 23456667788776543 346789999999999999999999987543221 1110
Q ss_pred HhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 667 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+.....|.++ -+....+++.++|..|+.+|-++||++.++++.
T Consensus 240 ---------IpRNPPPkLk--rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 240 ---------IPRNPPPKLK--RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ---------CCCCCCcccc--chhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 1111222222 244556788999999999999999999998863
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=283.48 Aligned_cols=236 Identities=17% Similarity=0.200 Sum_probs=184.4
Q ss_pred HhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
.++.|.....+|.|+|+.|-++. ..+++..+||++.... .+-.+|+.++.+. +||||+++.+.+. +
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~--------~ 387 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYE--------D 387 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceec--------C
Confidence 46778888899999999999888 5678899999997652 2345677776666 6999999998774 5
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceee-cCCCceeEecC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL-DKALTAKLSGY 605 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl-d~~~~~kl~DF 605 (740)
+.+.|+|||++.||-+.+.+.. ..... ..+..|+.+++.|+.|||+ +||||||+||+|||+ ++.++++|+||
T Consensus 388 ~~~~~~v~e~l~g~ell~ri~~---~~~~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyF 460 (612)
T KOG0603|consen 388 GKEIYLVMELLDGGELLRRIRS---KPEFC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYF 460 (612)
T ss_pred CceeeeeehhccccHHHHHHHh---cchhH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEe
Confidence 6779999999999998887743 22223 6778899999999999999 799999999999999 58999999999
Q ss_pred CCCCCCCCC------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 606 NIPLPSKKG------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 606 Gla~~~~~~------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
|.++..... +..|.+||... ..+|++++|+||||++||||++|+.||.....+ .+...+. ... +..+.
T Consensus 461 G~a~~~~~~~~tp~~t~~y~APEvl~-~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~~~i-~~~--~~s~~ 534 (612)
T KOG0603|consen 461 GFWSELERSCDTPALTLQYVAPEVLA-IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIHTRI-QMP--KFSEC 534 (612)
T ss_pred chhhhCchhhcccchhhcccChhhhc-cCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHHHhh-cCC--ccccc
Confidence 999765443 33355666655 789999999999999999999999999865544 1111111 111 11122
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
......+|+.+||+.||.+||+|.|+...-
T Consensus 535 ------------vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~ 564 (612)
T KOG0603|consen 535 ------------VSDEAKDLLQQLLQVDPALRLGADEIGAHP 564 (612)
T ss_pred ------------cCHHHHHHHHHhccCChhhCcChhhhccCc
Confidence 234556999999999999999999998654
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=285.68 Aligned_cols=266 Identities=17% Similarity=0.174 Sum_probs=176.4
Q ss_pred HhcCCCCCCeeecCCCccEEEEEe-----------------cCCCEEEEEEeecccccChhH--------------HHHH
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL-----------------TDGSRVSVKCLKLKQRHLPQS--------------LMQH 497 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~-----------------~~g~~vAvK~l~~~~~~~~~~--------------~~~E 497 (740)
..++|++.++||+|+||+||+|.. .+++.||||+++.......++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999963 235689999987543322223 3447
Q ss_pred HHHHhhccCccc-----ceeeceeeeeccCCCCCCCceEEEEecccCcchhhhccccc---------------------C
Q 004637 498 VELLSKLRHRHL-----VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK---------------------K 551 (740)
Q Consensus 498 i~il~~l~H~nI-----v~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------------~ 551 (740)
+.++.+++|.++ +++++||.....+.....+..++||||+++|+|.++++... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777778876654 77888886433322234466899999999999999986421 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCC----------CCCCcccc
Q 004637 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK----------GLESPLRG 621 (740)
Q Consensus 552 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~----------~~~~~~~~ 621 (740)
...++|..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.... .+..|.+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 1235678899999999999999998 7999999999999999999999999999854221 12345566
Q ss_pred ccccCCCC-------------------C--CCccceehhhHHHHHHHhCCC-CCCCCccchh-HHHHHHhhhcCCccccc
Q 004637 622 QYVSNQPG-------------------D--GAKEDVYQLGVILLQVITGKQ-VKSTSEVDGL-KLQLETCLAEAPSKLRA 678 (740)
Q Consensus 622 ~~~~~~~~-------------------~--~~ksDVwSfGvil~ElltG~~-p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 678 (740)
|.+..... | ..+.||||+||++|||++|.. |+........ .................
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 65432110 1 235799999999999999874 6643211100 00000000000000000
Q ss_pred ccCccccCCCcHHHHHHHHHHHHhccccCC---CCCCCHHHHHHHh
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDA---AKRPSIEDVLWNL 721 (740)
Q Consensus 679 ~~~~~l~~~~~~~~~~~~~~li~~cl~~dP---~~RPs~~evl~~L 721 (740)
..+-. ..........+++.+++..+| .+|+|++|++++-
T Consensus 460 ~~~~~----~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp 501 (507)
T PLN03224 460 KYDFS----LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHR 501 (507)
T ss_pred CCCcc----cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCC
Confidence 00000 011123456789999999766 7899999998753
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=266.48 Aligned_cols=257 Identities=20% Similarity=0.255 Sum_probs=196.0
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccC--c----ccceeeceeeeeccC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH--R----HLVSILGHCILTYQD 522 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H--~----nIv~l~g~~~~~~~~ 522 (740)
+++|.+...+|+|.||.|-++.. ..+..||||+++... ...+..+-|+++++++.+ | -+|.+.+++
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF------ 160 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWF------ 160 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh------
Confidence 68899999999999999999984 347899999998543 234566789999999942 2 255555544
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC------
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK------ 596 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~------ 596 (740)
+-.++.|+|+|.+ |-++.+++.+ .+..+++...+..++.|++++++|||+ .+++|-||||+|||+.+
T Consensus 161 --dyrghiCivfell-G~S~~dFlk~-N~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 161 --DYRGHICIVFELL-GLSTFDFLKE-NNYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred --hccCceEEEEecc-ChhHHHHhcc-CCccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEE
Confidence 3567799999998 4599999975 344568899999999999999999999 79999999999999932
Q ss_pred --------------CCceeEecCCCCCCCCC------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCC
Q 004637 597 --------------ALTAKLSGYNIPLPSKK------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTS 656 (740)
Q Consensus 597 --------------~~~~kl~DFGla~~~~~------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~ 656 (740)
+..+||+|||.|..... .+..|.+||.+. +-+++.++||||+||||+|+.||...|+..
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViL-gLGwS~pCDvWSiGCIL~ElytG~~LFqtH 312 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVIL-GLGWSQPCDVWSIGCILVELYTGETLFQTH 312 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchhee-ccCcCCccCceeeeeEEEEeeccceecccC
Confidence 23589999999965433 345577787766 678899999999999999999999999876
Q ss_pred ccchhHHHHHHhhhcCCccccccc-----------C-c--ccc----------------CCCcHHHHHHHHHHHHhcccc
Q 004637 657 EVDGLKLQLETCLAEAPSKLRAEA-----------D-P--SVR----------------GTYAYDSLRTTVEITINCLSK 706 (740)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~--~l~----------------~~~~~~~~~~~~~li~~cl~~ 706 (740)
+..+-...+++...+.|..+..-. | + ... ......+..++++|+.+++..
T Consensus 313 en~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~f 392 (415)
T KOG0671|consen 313 ENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEF 392 (415)
T ss_pred CcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHcc
Confidence 644444566666555554332211 1 0 000 011234566799999999999
Q ss_pred CCCCCCCHHHHHHHh
Q 004637 707 DAAKRPSIEDVLWNL 721 (740)
Q Consensus 707 dP~~RPs~~evl~~L 721 (740)
||.+|+|+.|++++-
T Consensus 393 DP~~RiTl~EAL~Hp 407 (415)
T KOG0671|consen 393 DPARRITLREALSHP 407 (415)
T ss_pred CccccccHHHHhcCH
Confidence 999999999998753
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-31 Score=265.41 Aligned_cols=231 Identities=21% Similarity=0.278 Sum_probs=186.7
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecc---cccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~ 525 (740)
.+|....+||+|+||.|..|.. .+.+.+|||++++. +....+--+.|-++|..- +-|.++++..++ +
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF--------Q 420 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF--------Q 420 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh--------h
Confidence 4678899999999999999984 45678999999865 233344556677777766 578888887655 3
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecC
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DF 605 (740)
+-+.+|+||||+.||+|.-.++ .-+.+.++..+.+|.+||-||-|||+ ++||.||||.+|||+|.+|++||+||
T Consensus 421 TmDRLyFVMEyvnGGDLMyhiQ---Q~GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DF 494 (683)
T KOG0696|consen 421 TMDRLYFVMEYVNGGDLMYHIQ---QVGKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADF 494 (683)
T ss_pred hhhheeeEEEEecCchhhhHHH---HhcccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeec
Confidence 5567999999999999998885 34567888899999999999999999 89999999999999999999999999
Q ss_pred CCCCC---------CCCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 606 NIPLP---------SKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 606 Gla~~---------~~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|+.+. .-.|++.|++||.+. ...|+..+|.|||||+||||+.|++||++.+.+++...+...-...|
T Consensus 495 GmcKEni~~~~TTkTFCGTPdYiAPEIi~-YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP--- 570 (683)
T KOG0696|consen 495 GMCKENIFDGVTTKTFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP--- 570 (683)
T ss_pred ccccccccCCcceeeecCCCcccccceEE-ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc---
Confidence 99853 234677788888876 45678999999999999999999999999988887776654333332
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCC
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP 712 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP 712 (740)
....++..++....+.+.|.+|.
T Consensus 571 -------------KslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 571 -------------KSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred -------------ccccHHHHHHHHHHhhcCCcccc
Confidence 23335566888888999999983
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-31 Score=241.88 Aligned_cols=194 Identities=18% Similarity=0.312 Sum_probs=158.6
Q ss_pred cCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc-ccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
++......||+|+||.|-+-+ .++|+..|||+++..- .+..++..+|+.+..+. ..|.+|++||... ..
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~--------re 117 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALF--------RE 117 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhh--------cc
Confidence 334446789999999998887 5679999999998552 34456788899876555 7999999999664 33
Q ss_pred CceEEEEecccCcchhhhcccc-cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
..+++.||.|.- +|..+.++. .....+++...-+|+..|.+||.|||+. ..|||||+||+|||++.+|++|+||||
T Consensus 118 gdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFG 194 (282)
T KOG0984|consen 118 GDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFG 194 (282)
T ss_pred ccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccc
Confidence 558999999975 888776532 3566789999999999999999999995 899999999999999999999999999
Q ss_pred CC--------CCCCCCCCCccccccccC---CCCCCCccceehhhHHHHHHHhCCCCCCC
Q 004637 607 IP--------LPSKKGLESPLRGQYVSN---QPGDGAKEDVYQLGVILLQVITGKQVKST 655 (740)
Q Consensus 607 la--------~~~~~~~~~~~~~~~~~~---~~~~~~ksDVwSfGvil~ElltG~~p~~~ 655 (740)
++ +....|...|++||.... ...|+-|+||||+|+++.||.+++.|++.
T Consensus 195 IsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 195 ISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred cceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 87 233567777888876542 34788999999999999999999999874
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=261.30 Aligned_cols=214 Identities=15% Similarity=0.129 Sum_probs=161.8
Q ss_pred CCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEEecccCc
Q 004637 462 GSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNG 540 (740)
Q Consensus 462 G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~g 540 (740)
|.||.||+++. .+++.||+|+++... .+.+|...+....||||+++++++. .++..++||||+++|
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~~~~lv~e~~~~~ 70 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIV--------SEDSVFLVLQHAEGG 70 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhee--------cCCeEEEEEecCCCC
Confidence 89999999994 568999999987543 2344555555667999999998774 345689999999999
Q ss_pred chhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCC------C
Q 004637 541 SLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK------G 614 (740)
Q Consensus 541 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~------~ 614 (740)
+|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.++++|||.+..... .
T Consensus 71 ~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 144 (237)
T cd05576 71 KLWSHISK---FLNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAV 144 (237)
T ss_pred CHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCc
Confidence 99999853 3458999999999999999999998 7999999999999999999999999998643322 1
Q ss_pred CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHH
Q 004637 615 LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLR 694 (740)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 694 (740)
...+.+||... ...++.++||||+||++|||++|+.|+...... . ... ....+ +.....
T Consensus 145 ~~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~--------~~~-------~~~~~----~~~~~~ 203 (237)
T cd05576 145 ENMYCAPEVGG-ISEETEACDWWSLGAILFELLTGKTLVECHPSG-I--------NTH-------TTLNI----PEWVSE 203 (237)
T ss_pred CccccCCcccC-CCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-c--------ccc-------cccCC----cccCCH
Confidence 22345555443 345678999999999999999999887532110 0 000 00000 111124
Q ss_pred HHHHHHHhccccCCCCCCCHH
Q 004637 695 TTVEITINCLSKDAAKRPSIE 715 (740)
Q Consensus 695 ~~~~li~~cl~~dP~~RPs~~ 715 (740)
.+.+++.+|++.||++||++.
T Consensus 204 ~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 204 EARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHHHHHHccCCHHHhcCCC
Confidence 566899999999999999973
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-30 Score=263.84 Aligned_cols=249 Identities=22% Similarity=0.344 Sum_probs=181.4
Q ss_pred cCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc-------ccChhHHHHHHHHHhhccCcccceeeceeeeeccC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-------RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~-------~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~ 522 (740)
++|-..++||+|+|+.||||. +...+.||||+-.... ....+...+|..|.+.++||.||++|+|+..
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl---- 538 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL---- 538 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee----
Confidence 446667889999999999998 6678899999865332 1123457789999999999999999999863
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeec---CCCc
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD---KALT 599 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld---~~~~ 599 (740)
+.+.+|-|+|||+|.+|.-||+ ....+++.+...|+.||+.||.||.+ .+++|||-||||.|||+- ..|.
T Consensus 539 ---DtdsFCTVLEYceGNDLDFYLK---QhklmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGe 611 (775)
T KOG1151|consen 539 ---DTDSFCTVLEYCEGNDLDFYLK---QHKLMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGE 611 (775)
T ss_pred ---ccccceeeeeecCCCchhHHHH---hhhhhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccce
Confidence 3455899999999999999995 45568899999999999999999997 467999999999999994 4689
Q ss_pred eeEecCCCCCCCCCCC---------CCcccccccc--------C--CCCCCCccceehhhHHHHHHHhCCCCCCCCccch
Q 004637 600 AKLSGYNIPLPSKKGL---------ESPLRGQYVS--------N--QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDG 660 (740)
Q Consensus 600 ~kl~DFGla~~~~~~~---------~~~~~~~~~~--------~--~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~ 660 (740)
+||.|||+++..+... .+..+|.|.+ + .|..+.|+||||.|||+|..+.|+.||.......
T Consensus 612 IKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ 691 (775)
T KOG1151|consen 612 IKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ 691 (775)
T ss_pred eEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH
Confidence 9999999996543221 1112333322 1 3456889999999999999999999998543222
Q ss_pred hHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 661 LKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
-........... .+.--..|.+ ..+..++|.+|+++--++|....++..+
T Consensus 692 dILqeNTIlkAt--EVqFP~KPvV--------sseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 692 DILQENTILKAT--EVQFPPKPVV--------SSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred HHHhhhchhcce--eccCCCCCcc--------CHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 111111111100 0000011111 1244589999999999999988887654
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-30 Score=288.50 Aligned_cols=261 Identities=15% Similarity=0.108 Sum_probs=161.9
Q ss_pred HhcCCCCCCeeecCCCccEEEEEec-C----CCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLT-D----GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~-~----g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~ 523 (740)
..++|++.+.||+|+||.||+|+.. + +..||||++..... .+....| .+.+..+.+++.++..+.....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~-- 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVS-- 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccc--
Confidence 4578999999999999999999964 4 68999998763221 1111111 1222233344443332211111
Q ss_pred CCCCCceEEEEecccCcchhhhcccccCC-----------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecC
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKK-----------------DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD 586 (740)
...+...++||||+++++|.+++...... .......+..++.|++.||+|||+ .+|+|||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRD 280 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRD 280 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCc
Confidence 13456789999999999999998642110 011233456799999999999998 7999999
Q ss_pred CCCCceeecC-CCceeEecCCCCCCCCC----------CCCCccccccccCC---------------------CCCCCcc
Q 004637 587 LKTENILLDK-ALTAKLSGYNIPLPSKK----------GLESPLRGQYVSNQ---------------------PGDGAKE 634 (740)
Q Consensus 587 lKp~NILld~-~~~~kl~DFGla~~~~~----------~~~~~~~~~~~~~~---------------------~~~~~ks 634 (740)
|||+|||++. ++.+||+|||+|+.... ++..|++||.+... ..++.++
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999999985 58999999999964321 23345566633211 1234577
Q ss_pred ceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCcc----ccCCC--cHHHHHHHHHHHHhccccCC
Q 004637 635 DVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS----VRGTY--AYDSLRTTVEITINCLSKDA 708 (740)
Q Consensus 635 DVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~--~~~~~~~~~~li~~cl~~dP 708 (740)
|||||||++|||+++..++... .......+....... ..+.....+. +...+ .........+|+.+|++.||
T Consensus 361 DVwSlGviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDL-VAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcH-HHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 9999999999999977665421 111111111110000 0011111111 00000 00012234589999999999
Q ss_pred CCCCCHHHHHHH
Q 004637 709 AKRPSIEDVLWN 720 (740)
Q Consensus 709 ~~RPs~~evl~~ 720 (740)
++|||+.|++++
T Consensus 439 ~kR~ta~e~L~H 450 (566)
T PLN03225 439 RQRISAKAALAH 450 (566)
T ss_pred ccCCCHHHHhCC
Confidence 999999999985
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-30 Score=243.56 Aligned_cols=255 Identities=15% Similarity=0.248 Sum_probs=189.6
Q ss_pred hcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.++|++.+++|+|.|++||.|. ..+.+.++||+++... .+.+.+|+.||..++ |||||++++...++ ..
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp------~S 107 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDP------ES 107 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCc------cc
Confidence 4678888999999999999998 6678899999998654 367899999999997 99999999987532 34
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC-CceeEecCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAKLSGYN 606 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~-~~~kl~DFG 606 (740)
....+|+||+.+-+...+. ..++...+..++.++++||.|+|+ +||+|||+||.|++||.. -..+|+|+|
T Consensus 108 ktpaLiFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWG 178 (338)
T KOG0668|consen 108 KTPSLIFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWG 178 (338)
T ss_pred cCchhHhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecc
Confidence 5578999999998776665 347777889999999999999999 899999999999999954 579999999
Q ss_pred CCCCCCCCCCC-------ccc-cccccCCCCCCCccceehhhHHHHHHHhCCCCCCCC--ccchhHHHHH----------
Q 004637 607 IPLPSKKGLES-------PLR-GQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTS--EVDGLKLQLE---------- 666 (740)
Q Consensus 607 la~~~~~~~~~-------~~~-~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~--~~~~~~~~~~---------- 666 (740)
+|.....+... +.. ||.....+.|+..-|+|||||++.+|+..+.||-.. +.+++....+
T Consensus 179 LAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Y 258 (338)
T KOG0668|consen 179 LAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAY 258 (338)
T ss_pred hHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHH
Confidence 99765555433 222 344445567788999999999999999999997632 3333333222
Q ss_pred --HhhhcCCcccccccCccccCCC-------cHH-HHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 667 --TCLAEAPSKLRAEADPSVRGTY-------AYD-SLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 667 --~~~~~~~~~~~~~~~~~l~~~~-------~~~-~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
+.....+....+++...-+..+ ... ...++++++.+.+..|-.+|+|++|++..--
T Consensus 259 l~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hpy 324 (338)
T KOG0668|consen 259 LNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPY 324 (338)
T ss_pred HHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCch
Confidence 1111122222222111111111 001 1246789999999999999999999987654
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-30 Score=264.24 Aligned_cols=236 Identities=21% Similarity=0.308 Sum_probs=188.2
Q ss_pred CCeeecCCCccEEEEE-ecCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEE
Q 004637 456 TNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
.+.||+|.||+||-|+ .++|+.||||++.+-. .+....+.+|+.||+.++||.||.+.-.| ++.+.+++
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~--------ET~ervFV 640 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF--------ETPERVFV 640 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee--------cCCceEEE
Confidence 5789999999999998 5679999999997542 34457899999999999999999998666 35677999
Q ss_pred EEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC---CceeEecCCCCC
Q 004637 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---LTAKLSGYNIPL 609 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~---~~~kl~DFGla~ 609 (740)
|||-+.| +..+.+-. ..++.+++......+.||+.||.|||. ++|+|+||||+|||+.+. -.+||||||+|+
T Consensus 641 VMEKl~G-DMLEMILS-sEkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 641 VMEKLHG-DMLEMILS-SEKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred Eehhhcc-hHHHHHHH-hhcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeecccccee
Confidence 9999965 66666544 356779999999999999999999999 899999999999999643 369999999996
Q ss_pred CC--------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccC
Q 004637 610 PS--------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEAD 681 (740)
Q Consensus 610 ~~--------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (740)
.. ..|++.|.+||... ...|...-|+||.|||+|--++|..||..+ +++..++.....-.|..-
T Consensus 716 iIgEksFRrsVVGTPAYLaPEVLr-nkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~P----- 787 (888)
T KOG4236|consen 716 IIGEKSFRRSVVGTPAYLAPEVLR-NKGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNP----- 787 (888)
T ss_pred ecchhhhhhhhcCCccccCHHHHh-hccccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCc-----
Confidence 43 34677788888765 677888899999999999999999999743 345555544333332221
Q ss_pred ccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 682 PSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 682 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
..+.....+++|...++..-++|-|.++.+.
T Consensus 788 -------W~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 788 -------WSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred -------hhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 2233345679999999999999999888765
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=250.57 Aligned_cols=229 Identities=24% Similarity=0.352 Sum_probs=177.7
Q ss_pred CCccEEEEEec-CCCEEEEEEeecccccC-hhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEEecccCc
Q 004637 463 SQGQLYKGFLT-DGSRVSVKCLKLKQRHL-PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNG 540 (740)
Q Consensus 463 ~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~-~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~g 540 (740)
+||.||+|+.. +++.+|+|++....... .+.+.+|++.+++++|+||+++++++. .....++++||++++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~--------~~~~~~l~~e~~~~~ 72 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFE--------DEDKLYLVMEYCDGG 72 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhhee--------eCCEEEEEEeCCCCC
Confidence 58999999965 48999999998665444 678999999999999999999999885 235689999999999
Q ss_pred chhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCC-------
Q 004637 541 SLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK------- 613 (740)
Q Consensus 541 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~------- 613 (740)
+|.+++.. ...+++..+..++.+++++++|||. .+|+|+||+|+||++++++.++++|||.+.....
T Consensus 73 ~L~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 146 (244)
T smart00220 73 DLFDLLKK---RGRLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTF 146 (244)
T ss_pred CHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccc
Confidence 99999854 2238899999999999999999999 6999999999999999999999999999854332
Q ss_pred -CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCC-CccchhHHHHHHhhhcCCcccccccCccccCCCcHH
Q 004637 614 -GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKST-SEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYD 691 (740)
Q Consensus 614 -~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 691 (740)
+...+.+||... ...++.++||||||++++||++|..||.. ................ .... ...
T Consensus 147 ~~~~~~~~pE~~~-~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~---------~~~ 212 (244)
T smart00220 147 VGTPEYMAPEVLL-GKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPP----FPPP---------EWK 212 (244)
T ss_pred cCCcCCCCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCC----Cccc---------ccc
Confidence 223344455443 45567899999999999999999999976 3322222222111100 0000 000
Q ss_pred HHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 692 SLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 692 ~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
....+.+++.+|+..+|++||++.++++
T Consensus 213 ~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 213 ISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred CCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 2245779999999999999999999987
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=299.75 Aligned_cols=256 Identities=26% Similarity=0.296 Sum_probs=240.8
Q ss_pred CCCEEEEEeCCCCCCCCCCCCCcCCCcccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEE
Q 004637 74 NSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVL 153 (740)
Q Consensus 74 ~~~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 153 (740)
-.+++.|+|++|.+++.++.. .....+|+.|+|++|.+.+.+|..+..+++|+.|++++|.+.+.+|..++.+++|+.|
T Consensus 331 l~~L~~L~L~~n~l~~~~p~~-l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L 409 (968)
T PLN00113 331 LPRLQVLQLWSNKFSGEIPKN-LGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRV 409 (968)
T ss_pred CCCCCEEECcCCCCcCcCChH-HhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEE
Confidence 357899999999998766532 3344689999999999999999999999999999999999999999999999999999
Q ss_pred EcccCcCccccCcccCCCCCCCeeeccCccCcccCCC-CCCCCCCCEEECCCCCCCCCCcCCC--CCCcEEEcccCcCcc
Q 004637 154 NISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRS 230 (740)
Q Consensus 154 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~~--~~L~~L~l~~N~l~~ 230 (740)
+|++|+++|.+|..+.++++|+.|+|++|.+++.+|. +..+++|+.|+|++|++.+.+|..+ .+|+.|+|++|++++
T Consensus 410 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~ 489 (968)
T PLN00113 410 RLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSG 489 (968)
T ss_pred ECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCC
Confidence 9999999999999999999999999999999998885 7889999999999999999998764 689999999999999
Q ss_pred cCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCccccCCCCCCEEEccCccccccCCCCcCC
Q 004637 231 EIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310 (740)
Q Consensus 231 ~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~ 310 (740)
.+|..|.++++|+.|+|++|++.+.+|..+.++++|++|+|++|.+++.+|..+..+++|+.|||++|+++|.+|..+..
T Consensus 490 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 569 (968)
T PLN00113 490 AVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGN 569 (968)
T ss_pred ccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeecCCCCCCCCCCC
Q 004637 311 NSLNRTVVSTWNCLSGVNTK 330 (740)
Q Consensus 311 ~~~l~~l~l~~N~l~~~~~~ 330 (740)
+..|+.+++++|+++|.+|.
T Consensus 570 l~~L~~l~ls~N~l~~~~p~ 589 (968)
T PLN00113 570 VESLVQVNISHNHLHGSLPS 589 (968)
T ss_pred CcccCEEeccCCcceeeCCC
Confidence 99999999999999998875
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-30 Score=264.24 Aligned_cols=240 Identities=16% Similarity=0.245 Sum_probs=192.3
Q ss_pred CCCCCCeeecCCCccEEEEEecCC-CEEEEEEeecc---cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLTDG-SRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~~g-~~vAvK~l~~~---~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
+++....||-|+||.|-.++.... ..+|+|++++. +.+..+.+..|-.||...+.|.||++|.-| .+.
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf--------rd~ 492 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF--------RDS 492 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh--------ccc
Confidence 344567899999999999886543 34899998764 344557788999999999999999999755 356
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
.++|++||-|-||.|-..|+ ..+.++..+...|+..+.+|++|||+ ++||.|||||+|.++|.+|.+||.|||+
T Consensus 493 kyvYmLmEaClGGElWTiLr---dRg~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGF 566 (732)
T KOG0614|consen 493 KYVYMLMEACLGGELWTILR---DRGSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGF 566 (732)
T ss_pred hhhhhhHHhhcCchhhhhhh---hcCCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhh
Confidence 77999999999999999995 46678888899999999999999999 8999999999999999999999999999
Q ss_pred CCCCC--------CCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccc
Q 004637 608 PLPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 608 a~~~~--------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
|+... .|++.|.+||.+. ....+.++|.||+|+++|||+||++||.+.+.......+.+.....
T Consensus 567 AKki~~g~KTwTFcGTpEYVAPEIIL-nKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i------- 638 (732)
T KOG0614|consen 567 AKKIGSGRKTWTFCGTPEYVAPEIIL-NKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI------- 638 (732)
T ss_pred HHHhccCCceeeecCCcccccchhhh-ccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-------
Confidence 96543 3566677777766 3456789999999999999999999999887766655554443221
Q ss_pred cCccccCCCcHHHHHHHHHHHHhccccCCCCCCC-----HHHHHHH
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS-----IEDVLWN 720 (740)
Q Consensus 680 ~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 720 (740)
.++....+...+++.+.+..+|.+|.. +.+|-++
T Consensus 639 -------~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 639 -------EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred -------hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 122333455668999999999999964 5555543
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.1e-30 Score=244.38 Aligned_cols=259 Identities=17% Similarity=0.248 Sum_probs=190.4
Q ss_pred CCCCeeecCCCccEEEEEe-cCCCEEEEEEeecc--cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 454 DPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 454 ~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
+..+.||-|+||.||.++. ++|+.||.|++... .....+.+.+|+++|..++|.|++..+++..-...+ --.++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~d---fFqEi 132 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPS---FFQEL 132 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCch---HHHHH
Confidence 4468899999999999985 57999999988643 223347889999999999999999998865322111 12457
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
|+++|.|.. +|..++- ....++...+.-+..||++||.|||+ .+|.||||||.|.|++.+...||||||+++.
T Consensus 133 YV~TELmQS-DLHKIIV---SPQ~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARv 205 (449)
T KOG0664|consen 133 YVLTELMQS-DLHKIIV---SPQALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLART 205 (449)
T ss_pred HHHHHHHHh-hhhheec---cCCCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEecccccccc
Confidence 899999975 9999884 45678888888999999999999999 7999999999999999999999999999975
Q ss_pred CCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCC-ccc---
Q 004637 611 SKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP-SKL--- 676 (740)
Q Consensus 611 ~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~--- 676 (740)
.+.. +..|.+||...+...|+.+.||||.|||+.|++..+..|...+..+..+.+........ +.+
T Consensus 206 ee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~A 285 (449)
T KOG0664|consen 206 WDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYA 285 (449)
T ss_pred cchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHH
Confidence 4332 23466788888888999999999999999999999988876544332222222211110 000
Q ss_pred ---------cc-ccCccccCC----CcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 677 ---------RA-EADPSVRGT----YAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 677 ---------~~-~~~~~l~~~----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
+. .-.|.+..- .+.+.-.+.+++.++++..||++|.+.++.+..+.
T Consensus 286 CEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 286 CEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred hhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 00 001111100 11122234557888899999999999999887664
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=259.86 Aligned_cols=194 Identities=17% Similarity=0.269 Sum_probs=158.9
Q ss_pred CCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeeccc---ccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
-|..++.||-|+||+|.+++ .++...+|+|.+++.+ .......+.|-.||...+.+-||++|-.| .++
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF--------QDk 701 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF--------QDK 701 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe--------ccC
Confidence 37778899999999999998 4557789999997653 23345678899999999999999998544 356
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
+.+|+||||++||++..+|- +.+.+.+.....++.++..|+++.|. .|+|||||||+|||||.+|++||.|||+
T Consensus 702 dnLYFVMdYIPGGDmMSLLI---rmgIFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 702 DNLYFVMDYIPGGDMMSLLI---RMGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGL 775 (1034)
T ss_pred CceEEEEeccCCccHHHHHH---HhccCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccc
Confidence 77999999999999999984 46778888889999999999999998 8999999999999999999999999998
Q ss_pred CC---------CCC------------------------------------------CCCCCccccccccCCCCCCCccce
Q 004637 608 PL---------PSK------------------------------------------KGLESPLRGQYVSNQPGDGAKEDV 636 (740)
Q Consensus 608 a~---------~~~------------------------------------------~~~~~~~~~~~~~~~~~~~~ksDV 636 (740)
.. ... .|+..|+++|.+. ..+|+.-+|.
T Consensus 776 CTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~-r~g~~q~cdw 854 (1034)
T KOG0608|consen 776 CTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLA-RTGYTQLCDW 854 (1034)
T ss_pred cccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhc-ccCccccchh
Confidence 51 000 0222344444433 5677889999
Q ss_pred ehhhHHHHHHHhCCCCCCCCccch
Q 004637 637 YQLGVILLQVITGKQVKSTSEVDG 660 (740)
Q Consensus 637 wSfGvil~ElltG~~p~~~~~~~~ 660 (740)
||.|||||||+.|+.||......+
T Consensus 855 ws~gvil~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTPGE 878 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCCCc
Confidence 999999999999999998665443
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=234.15 Aligned_cols=236 Identities=19% Similarity=0.238 Sum_probs=178.9
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecc---cccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~ 524 (740)
.++|+..++||+|+|+.|..+++ ++.+.+|+|++++. +.+..+....|-.+.... +||.+|-+..++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf-------- 320 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF-------- 320 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh--------
Confidence 46788999999999999999994 56789999999864 233345566677666666 699999988665
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
.+...+++|.||++||+|.-+++ .++.+++.....+...|..||.|||+ +|||.||||.+|||+|.+|++|+.|
T Consensus 321 qtesrlffvieyv~ggdlmfhmq---rqrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltd 394 (593)
T KOG0695|consen 321 QTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTD 394 (593)
T ss_pred cccceEEEEEEEecCcceeeehh---hhhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecc
Confidence 35567999999999999987774 45668999999999999999999999 8999999999999999999999999
Q ss_pred CCCCCC---------CCCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCc----cchhHHHHHHhhhc
Q 004637 605 YNIPLP---------SKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSE----VDGLKLQLETCLAE 671 (740)
Q Consensus 605 FGla~~---------~~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~----~~~~~~~~~~~~~~ 671 (740)
+|+.+. .-.|++.|.+||... +.+|+...|.|++||+|+||+.|+.||+--. ......++-....+
T Consensus 395 ygmcke~l~~gd~tstfcgtpnyiapeilr-geeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile 473 (593)
T KOG0695|consen 395 YGMCKEGLGPGDTTSTFCGTPNYIAPEILR-GEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE 473 (593)
T ss_pred cchhhcCCCCCcccccccCCCcccchhhhc-ccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh
Confidence 999753 223556677777654 6788999999999999999999999997321 11112222222221
Q ss_pred CCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCC
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP 712 (740)
Q Consensus 672 ~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP 712 (740)
..-++. .....+...++..-+.+||.+|.
T Consensus 474 kqirip------------rslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 474 KQIRIP------------RSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred hccccc------------ceeehhhHHHHHHhhcCCcHHhc
Confidence 111111 11123344677788999999983
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-28 Score=257.02 Aligned_cols=246 Identities=20% Similarity=0.293 Sum_probs=194.7
Q ss_pred HhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
..++|+....+|.|+||.||||+ ...++..|||+++........-..+|+-+++..+|||||.++|.+. ..
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsyl--------r~ 84 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYL--------RR 84 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhh--------hh
Confidence 45778889999999999999999 5679999999999887666777889999999999999999999775 34
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
+..+++||||.+|+|.+..+ ..+++++.++..+++...+|++|||+ ++-+|||||-.||++++.|.+|++|||.
T Consensus 85 dklwicMEycgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgv 158 (829)
T KOG0576|consen 85 DKLWICMEYCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGV 158 (829)
T ss_pred cCcEEEEEecCCCcccceee---ecccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCc
Confidence 55899999999999999875 56789999999999999999999999 7999999999999999999999999998
Q ss_pred CC---------CCCCCCCCccccccccC--CCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCccc
Q 004637 608 PL---------PSKKGLESPLRGQYVSN--QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 608 a~---------~~~~~~~~~~~~~~~~~--~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
+. ....|+.+++++|.... ...|..++|||+.|+...|+---++|............+.+.....| .+
T Consensus 159 saqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp-~l 237 (829)
T KOG0576|consen 159 SAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPP-TL 237 (829)
T ss_pred hhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCC-cc
Confidence 72 33457777888876543 45688999999999999999887777443222222222222111111 11
Q ss_pred ccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 677 ~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
.+- ......+-++++.|+.++|++||+++.+++
T Consensus 238 kDk----------~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 238 KDK----------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred cCC----------ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 111 111234568999999999999999988765
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-27 Score=246.49 Aligned_cols=257 Identities=16% Similarity=0.224 Sum_probs=197.7
Q ss_pred hcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccccChhHHHHHHHHHhhcc------CcccceeeceeeeeccC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR------HRHLVSILGHCILTYQD 522 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~------H~nIv~l~g~~~~~~~~ 522 (740)
-.+|.+....|+|-|++|.+|... .|+.||||++.... ...+.=++|++||++|. --|+++++-.|.
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~----- 504 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK----- 504 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh-----
Confidence 357888888999999999999944 58899999998543 22345578999999995 347888886653
Q ss_pred CCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC-Ccee
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAK 601 (740)
Q Consensus 523 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~-~~~k 601 (740)
..+++|||+|-+.- +|.++|........|....+..|+.|+.-||..|.. -+|+|.||||.|||+++. ..+|
T Consensus 505 ---hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~k~iLK 577 (752)
T KOG0670|consen 505 ---HKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNESKNILK 577 (752)
T ss_pred ---hcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEeccCcceee
Confidence 56789999999864 999999887777788899999999999999999998 599999999999999865 5789
Q ss_pred EecCCCCCCCCCCCC-------CccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCc
Q 004637 602 LSGYNIPLPSKKGLE-------SPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPS 674 (740)
Q Consensus 602 l~DFGla~~~~~~~~-------~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 674 (740)
|||||.|........ .|.+||++. +..|+...|+||.||+||||.||+..|.+.....+...........|.
T Consensus 578 LCDfGSA~~~~eneitPYLVSRFYRaPEIiL-G~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~ 656 (752)
T KOG0670|consen 578 LCDFGSASFASENEITPYLVSRFYRAPEIIL-GLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPN 656 (752)
T ss_pred eccCccccccccccccHHHHHHhccCcceee-cCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcH
Confidence 999999865543322 244666665 456789999999999999999999999987776666555544444433
Q ss_pred ccc-------cccC--------------------------c------ccc--CCCc---HHHHHHHHHHHHhccccCCCC
Q 004637 675 KLR-------AEAD--------------------------P------SVR--GTYA---YDSLRTTVEITINCLSKDAAK 710 (740)
Q Consensus 675 ~~~-------~~~~--------------------------~------~l~--~~~~---~~~~~~~~~li~~cl~~dP~~ 710 (740)
++. +.+| | .+. +.++ ...+.++.+|+.+|+..||++
T Consensus 657 KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~K 736 (752)
T KOG0670|consen 657 KMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEK 736 (752)
T ss_pred HHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhh
Confidence 221 1111 1 011 1122 234667889999999999999
Q ss_pred CCCHHHHHHH
Q 004637 711 RPSIEDVLWN 720 (740)
Q Consensus 711 RPs~~evl~~ 720 (740)
|.|..|+|++
T Consensus 737 Rit~nqAL~H 746 (752)
T KOG0670|consen 737 RITVNQALKH 746 (752)
T ss_pred cCCHHHHhcC
Confidence 9999998864
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-27 Score=259.58 Aligned_cols=235 Identities=23% Similarity=0.328 Sum_probs=168.8
Q ss_pred CCCCCeeecCCCcc-EEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCCCCce
Q 004637 453 FDPTNLIGEGSQGQ-LYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 453 f~~~~~iG~G~fg~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
|...+++|.|+-|+ ||+|.++ |+.||||++-... ..-..+||+.|+.- +|||||++|+.- .+..+.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E--------~d~qF~ 578 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSE--------QDRQFL 578 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeec--------cCCceE
Confidence 44456789999996 7999985 7899999986332 34567999999998 599999997532 356779
Q ss_pred EEEEecccCcchhhhcccc-cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC-----CCceeEec
Q 004637 531 FLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-----ALTAKLSG 604 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~-----~~~~kl~D 604 (740)
||..|.|.. +|.+++... .......-...+.+..|+++||++||+ .+||||||||.||||+. ..+++|+|
T Consensus 579 YIalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 579 YIALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred EEEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecc
Confidence 999999976 999999652 111111113346788999999999999 79999999999999975 25899999
Q ss_pred CCCCCCCCC------------CCCCccccccccCCCCCCCccceehhhHHHHHHHhC-CCCCCCCccchhHHHHHHhhhc
Q 004637 605 YNIPLPSKK------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITG-KQVKSTSEVDGLKLQLETCLAE 671 (740)
Q Consensus 605 FGla~~~~~------------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG-~~p~~~~~~~~~~~~~~~~~~~ 671 (740)
||+++.... |+..+.+||.+.. ..-+.++||||+||++|..++| .+||......+. .+ ...
T Consensus 655 fglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~-~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NI---l~~ 728 (903)
T KOG1027|consen 655 FGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLRE-DRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NI---LTG 728 (903)
T ss_pred cccccccCCCcchhhcccCCCCcccccCHHHHhc-cccCcccchhhcCceEEEEecCCccCCCchHHhhh--hh---hcC
Confidence 999864332 3444556666543 3335689999999999999996 899974322110 01 111
Q ss_pred CCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 672 ~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
.. .+... . ...++ +..+||.+|+..||..||++.+|+.
T Consensus 729 ~~-~L~~L-~------~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 729 NY-TLVHL-E------PLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred cc-ceeee-c------cCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 10 01000 0 01111 5679999999999999999999985
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=237.18 Aligned_cols=135 Identities=22% Similarity=0.365 Sum_probs=114.6
Q ss_pred cCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhcc-----C---cccceeeceeeeecc
Q 004637 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-----H---RHLVSILGHCILTYQ 521 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~-----H---~nIv~l~g~~~~~~~ 521 (740)
.+|.+.++||-|.|++||+|. .++.+.||+|+++.. ....+....||++|++++ | ..||+++++|...+
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG- 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG- 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC-
Confidence 679999999999999999999 566889999998743 334567789999999995 2 47999999987443
Q ss_pred CCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceee
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594 (740)
Q Consensus 522 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 594 (740)
..+.++|||+|+. |-+|..+|... ..+.++...+.+|++||+.||.|||.. -+|||-||||+|||+
T Consensus 156 ---pNG~HVCMVfEvL-GdnLLklI~~s-~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 ---PNGQHVCMVFEVL-GDNLLKLIKYS-NYRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLL 221 (590)
T ss_pred ---CCCcEEEEEehhh-hhHHHHHHHHh-CCCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeee
Confidence 4789999999999 55899988753 345589999999999999999999997 589999999999999
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.3e-26 Score=223.83 Aligned_cols=203 Identities=29% Similarity=0.488 Sum_probs=167.3
Q ss_pred eecCCCccEEEEEecC-CCEEEEEEeeccccc-ChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEEec
Q 004637 459 IGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEH 536 (740)
Q Consensus 459 iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~-~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~Ey 536 (740)
||+|++|.||+++..+ ++.+++|++...... ..+.+.+|++.+++++|++|+++++++. .....+++|||
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~--------~~~~~~~~~e~ 72 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE--------DENHLYLVMEY 72 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeee--------cCCeEEEEEec
Confidence 6899999999999654 899999999855432 3467999999999999999999999875 23568999999
Q ss_pred ccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC-CCceeEecCCCCCCCCCC-
Q 004637 537 ISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLSGYNIPLPSKKG- 614 (740)
Q Consensus 537 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~-~~~~kl~DFGla~~~~~~- 614 (740)
+++++|.+++... ...+++..+..++.+++++++|||+ .+++|+||+|.||+++. ++.++|+|||.+......
T Consensus 73 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 73 CEGGSLKDLLKEN--EGKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred CCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 9999999998642 1468899999999999999999999 69999999999999999 899999999988543322
Q ss_pred --------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccC
Q 004637 615 --------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRG 686 (740)
Q Consensus 615 --------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 686 (740)
...+..|+.......++.+.|+|++|++++||
T Consensus 148 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------- 187 (215)
T cd00180 148 SLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------- 187 (215)
T ss_pred chhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------
Confidence 22233444443323667899999999999999
Q ss_pred CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 687 TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 687 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
..+.+++.+|+..||++||++.++++.+
T Consensus 188 -------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 2345899999999999999999998753
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-27 Score=231.77 Aligned_cols=258 Identities=18% Similarity=0.218 Sum_probs=181.3
Q ss_pred cCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecc--cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.+|.-...+|.|.- .|..|.. -.+++||+|++... .....++..+|...+..+.|+||++++.++. .+...+..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ft--P~~~l~~~ 93 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFT--PQKTLEEF 93 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccC--ccccHHHH
Confidence 34555677888877 5555552 24889999988643 2233467889999999999999999998874 22222344
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGl 607 (740)
...|+|||||.. +|.+.++ ..++-.+...|..|++.|++|||+ .+|+||||||+||++..+..+||.|||+
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVIL-----MELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchh
Confidence 568999999975 9999885 346777889999999999999999 7999999999999999999999999999
Q ss_pred CCCCCCC--------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhc--------
Q 004637 608 PLPSKKG--------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE-------- 671 (740)
Q Consensus 608 a~~~~~~--------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~-------- 671 (740)
|+..... +..|.+||...+.. |.+.+||||.||++.||++|+..|.+.+.-+-...+......
T Consensus 165 ar~e~~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 165 ARTEDTDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred hcccCcccccCchhheeeccCchheeccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 9654333 22345666665444 889999999999999999999888754321111111111100
Q ss_pred -----------CCcccc----ccc-CccccC--CCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHh
Q 004637 672 -----------APSKLR----AEA-DPSVRG--TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 672 -----------~~~~~~----~~~-~~~l~~--~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 721 (740)
.+.... +.+ |..... ....-....+.+++.+||..||++|.++++++++-
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP 311 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP 311 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence 000000 000 000000 01112234567999999999999999999999864
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.1e-26 Score=217.29 Aligned_cols=245 Identities=16% Similarity=0.236 Sum_probs=173.0
Q ss_pred hcCCCCCCeeecCCCccEEEEEe-cCCCEEEEEEeecccccChhHHHHHHHHHhhc-cCcccceeeceeeeeccCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l-~H~nIv~l~g~~~~~~~~~~~~~ 527 (740)
.+.|++.+.+|+|.||.+-.++. +..+.+++|.+... ....++|.+|..---.+ .|.||+.-|+... +..
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaF-------qt~ 94 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAF-------QTS 94 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHh-------hcC
Confidence 45688899999999999999995 45778999988744 33457899988754445 5999998876543 355
Q ss_pred CceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeec--CCCceeEecC
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD--KALTAKLSGY 605 (740)
Q Consensus 528 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld--~~~~~kl~DF 605 (740)
+.+++++||++.|+|..-+.. ..+.+....+++.|++.|+.|||+ .++||||||.+||||- +..++|+|||
T Consensus 95 d~YvF~qE~aP~gdL~snv~~----~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 95 DAYVFVQEFAPRGDLRSNVEA----AGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred ceEEEeeccCccchhhhhcCc----ccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeec
Confidence 678999999999999988743 346777889999999999999999 7999999999999993 3458999999
Q ss_pred CCCCCCCCC------CCCcccccccc----CCCCCCCccceehhhHHHHHHHhCCCCCCCCccch--hHHHHHHhhhcCC
Q 004637 606 NIPLPSKKG------LESPLRGQYVS----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDG--LKLQLETCLAEAP 673 (740)
Q Consensus 606 Gla~~~~~~------~~~~~~~~~~~----~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~--~~~~~~~~~~~~~ 673 (740)
|.++..... ...+.+||... ..-...+.+|||.|||++|.++||+.||.....++ ...+........+
T Consensus 168 G~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~ 247 (378)
T KOG1345|consen 168 GLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP 247 (378)
T ss_pred ccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc
Confidence 998654332 12233443321 11123567899999999999999999998543332 2223332222221
Q ss_pred cccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 674 ~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
.+++.+.+ +. ..+.++..+-+..+|++|--..++-+
T Consensus 248 -~~P~~F~~-----fs----~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 248 -ALPKKFNP-----FS----EKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred -cCchhhcc-----cC----HHHHHHHHHhcCCcccccchhHHHHH
Confidence 22222211 11 23456777889999999954444443
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-25 Score=222.10 Aligned_cols=190 Identities=26% Similarity=0.405 Sum_probs=157.0
Q ss_pred CCCCCeeecCCCccEEEEEecC-CCEEEEEEeeccccc-ChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCce
Q 004637 453 FDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~-~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
|++.+.||+|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++. .....
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~--------~~~~~ 72 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE--------DPEPL 72 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee--------cCCce
Confidence 5567899999999999999765 889999999865444 5678999999999999999999999875 23558
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
++++||+++++|.+++.... ..+++.....++.+++.++.|||. .+++|+|++|+||+++.++.++|+|||.+..
T Consensus 73 ~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 73 YLVMEYCEGGDLFDYLRKKG--GKLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred EEEEeccCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence 99999999999999986422 117899999999999999999998 6999999999999999999999999998754
Q ss_pred CCCC----------CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCC
Q 004637 611 SKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKST 655 (740)
Q Consensus 611 ~~~~----------~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~ 655 (740)
.... ...+..++.......++.++|||+||++++||++|+.||..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 148 IHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 3222 11233444432445567799999999999999999999965
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.4e-26 Score=238.26 Aligned_cols=190 Identities=18% Similarity=0.318 Sum_probs=161.0
Q ss_pred cCCCCCCeeecCCCccEEEEEecC-CCEEEEEEeeccc--------ccChhHHHHHHHHHhhcc---Ccccceeeceeee
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQ--------RHLPQSLMQHVELLSKLR---HRHLVSILGHCIL 518 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~--------~~~~~~~~~Ei~il~~l~---H~nIv~l~g~~~~ 518 (740)
.+|+..+.+|+|+||.|+.|.++. ...|+||.+.+.+ ......+-.|++||..++ |+||++++++|.
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE- 639 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE- 639 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee-
Confidence 458889999999999999999654 5678999987542 111224567999999997 999999999884
Q ss_pred eccCCCCCCCceEEEEecc-cCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC
Q 004637 519 TYQDHPNTGSTVFLVLEHI-SNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (740)
Q Consensus 519 ~~~~~~~~~~~~~lV~Ey~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~ 597 (740)
+++++||+||-- ++-+|.+++. .+..+++.....|++||+-|+++||+ .+|||||||-+||.+|.+
T Consensus 640 -------ddd~yyl~te~hg~gIDLFd~IE---~kp~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~ 706 (772)
T KOG1152|consen 640 -------DDDYYYLETEVHGEGIDLFDFIE---FKPRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSN 706 (772)
T ss_pred -------cCCeeEEEecCCCCCcchhhhhh---ccCccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecC
Confidence 667799999974 5668999994 56678999999999999999999999 799999999999999999
Q ss_pred CceeEecCCCCCCCCC-------CCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCC
Q 004637 598 LTAKLSGYNIPLPSKK-------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKS 654 (740)
Q Consensus 598 ~~~kl~DFGla~~~~~-------~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~ 654 (740)
|-+||+|||.|...+. |+..+.+||..-+.++.+..-|||++||+||.++....||+
T Consensus 707 g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 707 GFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999999999865443 55667788888777778889999999999999999988886
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.9e-25 Score=223.89 Aligned_cols=256 Identities=21% Similarity=0.293 Sum_probs=182.1
Q ss_pred HHHHhcCCCCCCeeecCCCccEEEEEec----CCCEEEEEEeecccccChhHHHHHHHHHhhcc-Ccccceeeceeeeec
Q 004637 446 IEEATNNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTY 520 (740)
Q Consensus 446 l~~~~~~f~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~ 520 (740)
+....+.|...++||+|.|++||++... ..+.||+|.+.... ....+..|++.|..+. +.||+++.+++.
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~r--- 105 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFR--- 105 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhc---
Confidence 4445677899999999999999999843 46789999987543 3567999999999995 999999998764
Q ss_pred cCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC-CCc
Q 004637 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALT 599 (740)
Q Consensus 521 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~-~~~ 599 (740)
.++.+.+|+||++.-+-.+++.+ ++...+..+++.+.+||+++|. .|||||||||+|+|.+. .+.
T Consensus 106 -----nnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~r 171 (418)
T KOG1167|consen 106 -----NNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQR 171 (418)
T ss_pred -----cCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCC
Confidence 55679999999999888888743 6788999999999999999999 79999999999999984 567
Q ss_pred eeEecCCCCCCC------------------C-----------------------------------CCCCCccccccccC
Q 004637 600 AKLSGYNIPLPS------------------K-----------------------------------KGLESPLRGQYVSN 626 (740)
Q Consensus 600 ~kl~DFGla~~~------------------~-----------------------------------~~~~~~~~~~~~~~ 626 (740)
-.|.|||+|... . .|+..+.+||....
T Consensus 172 g~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k 251 (418)
T KOG1167|consen 172 GVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR 251 (418)
T ss_pred ceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh
Confidence 899999997310 0 01111122233333
Q ss_pred CCCCCCccceehhhHHHHHHHhCCCCCCCCcc--chhHHHHHHh-------hhcCCcc--ccc---------------cc
Q 004637 627 QPGDGAKEDVYQLGVILLQVITGKQVKSTSEV--DGLKLQLETC-------LAEAPSK--LRA---------------EA 680 (740)
Q Consensus 627 ~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~--~~~~~~~~~~-------~~~~~~~--~~~---------------~~ 680 (740)
.+..++++||||-|||++-+++++.||-.... +.+.+.+... ....++. +.+ .+
T Consensus 252 ~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~ 331 (418)
T KOG1167|consen 252 CPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETL 331 (418)
T ss_pred ccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhcc
Confidence 44457889999999999999999999864322 2222111100 0001111 111 01
Q ss_pred C-ccccC--------CCcHHH-HHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 681 D-PSVRG--------TYAYDS-LRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 681 ~-~~l~~--------~~~~~~-~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
+ +.+.. ....+. ...+++++.+|+..||.+|.|++|++++
T Consensus 332 ~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 332 HIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0 00110 001111 2267899999999999999999999874
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-26 Score=239.32 Aligned_cols=250 Identities=20% Similarity=0.133 Sum_probs=165.4
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCCcccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEEE
Q 004637 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (740)
Q Consensus 75 ~~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (740)
++++.|+|.+|.|+..-+. ....++.++.||||.|.++...-..|..=.++++|+|++|.++..--..|.+|.+|..|.
T Consensus 125 ghl~~L~L~~N~I~sv~se-~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlk 203 (873)
T KOG4194|consen 125 GHLEKLDLRHNLISSVTSE-ELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLK 203 (873)
T ss_pred cceeEEeeeccccccccHH-HHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeee
Confidence 5799999999988543322 223345777888888888777667777777888888888888666667788888888888
Q ss_pred cccCcCccccC-cccCCCCCCCeeeccCccCccc-CCCCC------------------------CCCCCCEEECCCCCCC
Q 004637 155 ISSNFIYGEIP-MEITSLKNLKSIVLADNLLNGS-VPDLQ------------------------RLVLLEELNLGGNDFG 208 (740)
Q Consensus 155 Ls~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~~~-~~~~~------------------------~l~~L~~L~L~~N~l~ 208 (740)
|+.|+++ .+| ..|.+|++|+.|+|..|++.-. .-.|. .|.++++|+|+.|+++
T Consensus 204 LsrNrit-tLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~ 282 (873)
T KOG4194|consen 204 LSRNRIT-TLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ 282 (873)
T ss_pred cccCccc-ccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh
Confidence 8888888 444 4466688888888888887643 11244 4445555555555554
Q ss_pred CCCcCC---CCCCcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCcccc
Q 004637 209 PKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285 (740)
Q Consensus 209 ~~~p~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 285 (740)
..-.++ ++.|+.|+|++|.|+...++++..+++|++|||++|+|+...+..|..|..|++|+|++|.++..-...|.
T Consensus 283 ~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~ 362 (873)
T KOG4194|consen 283 AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFV 362 (873)
T ss_pred hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHH
Confidence 433332 25566666666666666666666666666666666666666666666666666666666666655555566
Q ss_pred CCCCCCEEEccCccccccCCC---CcCCCCCCceeecCCCCCCC
Q 004637 286 CSAKLNFVEISHNLLIGKLPS---CIGSNSLNRTVVSTWNCLSG 326 (740)
Q Consensus 286 ~l~~L~~l~ls~N~l~~~~p~---~~~~~~~l~~l~l~~N~l~~ 326 (740)
.+++|+.|||++|.|++.|.. .|..+++|+.|.+.+|++..
T Consensus 363 ~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~ 406 (873)
T KOG4194|consen 363 GLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKS 406 (873)
T ss_pred HhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeee
Confidence 666666666666666665543 24456666666666666543
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-26 Score=238.31 Aligned_cols=253 Identities=19% Similarity=0.093 Sum_probs=212.3
Q ss_pred CCCEEEEEeCCCCCCCCCCCCCcCC-CcccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCE
Q 004637 74 NSRVTELTVIGNKSSPAHSPKPTFG-KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEV 152 (740)
Q Consensus 74 ~~~v~~l~l~~~~l~~~~~~~~~~~-~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 152 (740)
...++++++..|.++. +|. +.+ .+.+..|+|.+|.|...-..++..++.|+.||||.|.++..--+.|..=.++++
T Consensus 101 l~nLq~v~l~~N~Lt~-IP~--f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~ 177 (873)
T KOG4194|consen 101 LPNLQEVNLNKNELTR-IPR--FGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKK 177 (873)
T ss_pred CCcceeeeeccchhhh-ccc--ccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceE
Confidence 3578999999998853 221 222 246999999999999999999999999999999999996544468888889999
Q ss_pred EEcccCcCccccCcccCCCCCCCeeeccCccCcccCCC-CCCCCCCCEEECCCCCCCCC-------CcC-----------
Q 004637 153 LNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPK-------FPS----------- 213 (740)
Q Consensus 153 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~-------~p~----------- 213 (740)
|+|++|.|+..--..|.+|.+|..|.|++|+++..++- |.+|+.|+.|||..|++.-. +|+
T Consensus 178 L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I 257 (873)
T KOG4194|consen 178 LNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDI 257 (873)
T ss_pred EeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCc
Confidence 99999999966667799999999999999999998885 88899999999999997411 121
Q ss_pred ---------CCCCCcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCccc
Q 004637 214 ---------LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284 (740)
Q Consensus 214 ---------~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 284 (740)
.+.++++|+|..|+++..--.++.+|+.|+.|+||+|.|...-++.+...++|++|+|++|+++...+.+|
T Consensus 258 ~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf 337 (873)
T KOG4194|consen 258 SKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSF 337 (873)
T ss_pred ccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHH
Confidence 12577888888888887777788888899999999999888888888888899999999999988888888
Q ss_pred cCCCCCCEEEccCccccccCCCCcCCCCCCceeecCCCCCCCCCC
Q 004637 285 SCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (740)
Q Consensus 285 ~~l~~L~~l~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (740)
..+..|+.|+|++|.++..--..|..+++|++|+|++|.+++.+.
T Consensus 338 ~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IE 382 (873)
T KOG4194|consen 338 RVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIE 382 (873)
T ss_pred HHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEe
Confidence 888889999999998887767778888999999999998887654
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.7e-24 Score=253.94 Aligned_cols=194 Identities=17% Similarity=0.187 Sum_probs=135.6
Q ss_pred hccC-cccceeeceeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC
Q 004637 503 KLRH-RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG 581 (740)
Q Consensus 503 ~l~H-~nIv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 581 (740)
.++| +||++++++|.....+. .....++.++||+. ++|.+++.. ....+++.+++.++.||++||+|||+ .+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~-~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDG-LDDDSIVRALECED-VSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAHS---QG 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccc-cccchhhhhhccCC-ccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHHh---CC
Confidence 4556 68888998874332222 23345788899884 599999963 34568999999999999999999998 79
Q ss_pred ceecCCCCCceeecC-------------------CCceeEecCCCCCCCC-------------------------CCCCC
Q 004637 582 IFGNNLKTENILLDK-------------------ALTAKLSGYNIPLPSK-------------------------KGLES 617 (740)
Q Consensus 582 iiHrDlKp~NILld~-------------------~~~~kl~DFGla~~~~-------------------------~~~~~ 617 (740)
||||||||+||||+. ++.+|++|||+++... .++..
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999953 5567778888765311 12333
Q ss_pred ccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHH
Q 004637 618 PLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTV 697 (740)
Q Consensus 618 ~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 697 (740)
|++||+.. ...|+.++|||||||+||||++|.+|+..... ....+... . .++... .......
T Consensus 181 Y~APE~~~-~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~--~--------~~~~~~-----~~~~~~~ 242 (793)
T PLN00181 181 YTSPEEDN-GSSSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHR--V--------LPPQIL-----LNWPKEA 242 (793)
T ss_pred eEChhhhc-cCCCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHh--h--------cChhhh-----hcCHHHH
Confidence 66777655 34578999999999999999999888653211 11111100 0 011100 1122345
Q ss_pred HHHHhccccCCCCCCCHHHHHHHh
Q 004637 698 EITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 698 ~li~~cl~~dP~~RPs~~evl~~L 721 (740)
+++.+||+.||.+||+|.|++++-
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~h~ 266 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQSE 266 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhhch
Confidence 788899999999999999998743
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-25 Score=235.50 Aligned_cols=246 Identities=24% Similarity=0.230 Sum_probs=194.5
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCCcccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEEE
Q 004637 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (740)
Q Consensus 75 ~~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (740)
..++.|||+.|++.-..... -...+.-.|+||+|+|..+....|-+|+.|-.||||+|.+ ..+|+.+.+|..|++|+
T Consensus 103 ~dLt~lDLShNqL~EvP~~L--E~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrL-e~LPPQ~RRL~~LqtL~ 179 (1255)
T KOG0444|consen 103 KDLTILDLSHNQLREVPTNL--EYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRL-EMLPPQIRRLSMLQTLK 179 (1255)
T ss_pred ccceeeecchhhhhhcchhh--hhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchh-hhcCHHHHHHhhhhhhh
Confidence 35788888888885332211 1123556788888888666666778899999999999998 57788888888888888
Q ss_pred cccCcCc-------------------------cccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCCEEECCCCCCCC
Q 004637 155 ISSNFIY-------------------------GEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGP 209 (740)
Q Consensus 155 Ls~N~l~-------------------------g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~ 209 (740)
||+|-|. ..+|.++..|.+|..+|||.|.|...|..+.++.+|+.|+||+|+++.
T Consensus 180 Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~ite 259 (1255)
T KOG0444|consen 180 LSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITE 259 (1255)
T ss_pred cCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCceee
Confidence 8888653 137778888888888888888888777778888888888888888865
Q ss_pred CCc--CCCCCCcEEEcccCcCcccCCccccCCCCCcEEEccCCccc-cccchhhccCCCccEEecccccccccCCccccC
Q 004637 210 KFP--SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV-GPIQSFLFSLPSILYLNLAGNQLSEALPVNISC 286 (740)
Q Consensus 210 ~~p--~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 286 (740)
.-- ....+|++|+|+.|+|+ .+|++++.|++|+.|++.+|+|+ .-+|..+++|.+|+.+..++|++. .+|+.++.
T Consensus 260 L~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcR 337 (1255)
T KOG0444|consen 260 LNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCR 337 (1255)
T ss_pred eeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhh
Confidence 432 23578888899999987 78888889999999998888875 236888888888998888888885 78888988
Q ss_pred CCCCCEEEccCccccccCCCCcCCCCCCceeecCCCCCCC
Q 004637 287 SAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (740)
Q Consensus 287 l~~L~~l~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (740)
|..|+.|.|++|+|. .+|..+.-++.+..|++..|.---
T Consensus 338 C~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLV 376 (1255)
T KOG0444|consen 338 CVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLV 376 (1255)
T ss_pred hHHHHHhccccccee-echhhhhhcCCcceeeccCCcCcc
Confidence 999999999999888 688888888888899988875433
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-22 Score=229.75 Aligned_cols=282 Identities=19% Similarity=0.277 Sum_probs=182.7
Q ss_pred hhhcCCCCHhHHHHHHHHHHhCCCCCCCCC----CCCCCCCCCCCC-----------CCcccEEeCCCCEEEEEeCCCCC
Q 004637 23 PVSIGQLTPSETRILFQVQKLLEYPEVLQG----WTDWTNFCYLPS-----------SSSLKIVCTNSRVTELTVIGNKS 87 (740)
Q Consensus 23 ~~~~~~~~~~~~~~l~~~k~~~~~~~~l~~----W~~~~~~C~~~~-----------~~~~~v~C~~~~v~~l~l~~~~l 87 (740)
+......+++|.+.++++.+.+..|+.+.+ |+.++++|--.. .+...|.|....||.+...+...
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~ 133 (754)
T PRK15370 54 CHPPETASPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQ 133 (754)
T ss_pred hCCCCCCCHHHHHHHHHHHHHhcCCchhhccccccCCCCcccccCCcchhhheeeecCCceEEecCCCcccccccccccc
Confidence 334456678999999999999998987766 998899997765 46678999988999988877433
Q ss_pred CCCCCCCCcC-------------------------------C-CcccccccccCCcCCChhhhhhcCCCCCcEeeccccc
Q 004637 88 SPAHSPKPTF-------------------------------G-KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG 135 (740)
Q Consensus 88 ~~~~~~~~~~-------------------------------~-~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~ 135 (740)
.+.....-.. . ..+...|+|+++.+.. +|..+. ++|+.|+|++|+
T Consensus 134 ~~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~ 210 (754)
T PRK15370 134 ASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTT-IPACIP--EQITTLILDNNE 210 (754)
T ss_pred cccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCC
Confidence 2221110000 0 0123456777766543 454443 467888888888
Q ss_pred CccCCCccccCCCCCCEEEcccCcCccccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCCEEECCCCCCCCCCcCCC
Q 004637 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS 215 (740)
Q Consensus 136 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 215 (740)
++ .+|..+. ++|++|+|++|+|+ .+|..+. .+|+.|+|++|+++..++.+. .+|+.|+|++|+|+......+
T Consensus 211 Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~~LP~~l~--s~L~~L~Ls~N~L~~LP~~l~ 282 (754)
T PRK15370 211 LK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRITELPERLP--SALQSLDLFHNKISCLPENLP 282 (754)
T ss_pred CC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccCcCChhHh--CCCCEEECcCCccCccccccC
Confidence 85 5665543 47888888888887 6676553 467778888887775544443 467777777777764322344
Q ss_pred CCCcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCccccCCCCCCEEEc
Q 004637 216 KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295 (740)
Q Consensus 216 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 295 (740)
.+|+.|+|++|+|++ +|..+. ++|+.|++++|+|++ +|..+. ++|+.|++++|.|++ +|..+. ++|+.|++
T Consensus 283 ~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~L 353 (754)
T PRK15370 283 EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDV 353 (754)
T ss_pred CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEEC
Confidence 577777777777773 555442 356777777777764 443332 466777777777764 555443 56777777
Q ss_pred cCccccccCCCCcCCCCCCceeecCCCCCCCC
Q 004637 296 SHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (740)
Q Consensus 296 s~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (740)
++|+|+ .+|..+. +.|+.|++++|.++..
T Consensus 354 s~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~L 382 (754)
T PRK15370 354 SKNQIT-VLPETLP--PTITTLDVSRNALTNL 382 (754)
T ss_pred CCCCCC-cCChhhc--CCcCEEECCCCcCCCC
Confidence 777766 3555442 4566777777766653
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-23 Score=198.21 Aligned_cols=258 Identities=19% Similarity=0.355 Sum_probs=186.4
Q ss_pred CCCCCCCCHHHHHHHhcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeeccc--ccChhHHHHHHHHHhhccCccccee
Q 004637 435 LPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSI 512 (740)
Q Consensus 435 ~~~~~~~~~~~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~H~nIv~l 512 (740)
+..+.+++..++.- ..+|.+...|+.|+|+++ |..+++|+++..+ ....++|..|.-.|+-+.||||+.+
T Consensus 181 lsr~~gid~~~lnl-------~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpv 252 (448)
T KOG0195|consen 181 LSRYTGIDVSSLNL-------ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPV 252 (448)
T ss_pred cccccCcchhhhhh-------hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhh
Confidence 33445555555543 346888899999999997 4566778887553 3345789999999999999999999
Q ss_pred eceeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCce
Q 004637 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (740)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 592 (740)
+|.|. ...+..++..||+.|+|+..|++. ..-..+-.+.++++.++|+|++|||+- .+-|..--+.+..+
T Consensus 253 lgacn--------sppnlv~isq~mp~gslynvlhe~-t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hv 322 (448)
T KOG0195|consen 253 LGACN--------SPPNLVIISQYMPFGSLYNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHV 322 (448)
T ss_pred hhhcc--------CCCCceEeeeeccchHHHHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceE
Confidence 99994 345689999999999999999863 334567788999999999999999984 33444567899999
Q ss_pred eecCCCceeEe--cCCCCC--CCCCCCCCccccccccCCCCC--CCccceehhhHHHHHHHhCCCCCCCCccchhHHHHH
Q 004637 593 LLDKALTAKLS--GYNIPL--PSKKGLESPLRGQYVSNQPGD--GAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLE 666 (740)
Q Consensus 593 Lld~~~~~kl~--DFGla~--~~~~~~~~~~~~~~~~~~~~~--~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~ 666 (740)
++|++.+++|+ |--++. ......+..+.||.....++. -.++|+|||.|++||+.|...||..-...+.- ++
T Consensus 323 midedltarismad~kfsfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg--mk 400 (448)
T KOG0195|consen 323 MIDEDLTARISMADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG--MK 400 (448)
T ss_pred EecchhhhheecccceeeeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh--hh
Confidence 99999998875 433332 222233445566666555544 25789999999999999999999864432211 11
Q ss_pred HhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 667 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
... +.+...+.|. ....+.+++.-|+..||.+||.++.|+--|+..
T Consensus 401 ial----eglrv~ippg--------is~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 401 IAL----EGLRVHIPPG--------ISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred hhh----ccccccCCCC--------ccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 111 1122222222 234566899999999999999999999888865
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.6e-25 Score=231.23 Aligned_cols=225 Identities=22% Similarity=0.242 Sum_probs=130.2
Q ss_pred cCCCcccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCC-ccccCCCCCCEEEcccCcCccccCcccCCCCCC
Q 004637 96 TFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLP-SKINRFWSLEVLNISSNFIYGEIPMEITSLKNL 174 (740)
Q Consensus 96 ~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 174 (740)
.|....|..||||+|.+. ..|..+.+-.++-+|+||+|+|. .|| +-|-+|+.|-+||||+|+|. .+|+.+..|..|
T Consensus 99 iF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~L 175 (1255)
T KOG0444|consen 99 IFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSML 175 (1255)
T ss_pred hcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhh
Confidence 334445555555555542 33444555555555555555552 333 33445555555555555554 455555555555
Q ss_pred CeeeccCccCcc--------------------------cCCCCCCCCCCCEEECCCCCCCCCCcCC---CCCCcEEEccc
Q 004637 175 KSIVLADNLLNG--------------------------SVPDLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRN 225 (740)
Q Consensus 175 ~~L~L~~N~l~~--------------------------~~~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~l~~ 225 (740)
++|.|++|.|.- .|+++..|.+|..+|||.|+|. ..|.. +.+|+.|+|++
T Consensus 176 qtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~ 254 (1255)
T KOG0444|consen 176 QTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSG 254 (1255)
T ss_pred hhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCc
Confidence 555555554321 1112334444555555555442 22321 24555555666
Q ss_pred CcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccc-cCCccccCCCCCCEEEccCccccccC
Q 004637 226 NSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE-ALPVNISCSAKLNFVEISHNLLIGKL 304 (740)
Q Consensus 226 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~l~ls~N~l~~~~ 304 (740)
|+|+ .+....+...+|+.|+||.|+|+ .+|+.+++|++|+.|++.+|+++- -+|..|+.+.+|+++..++|.|. .+
T Consensus 255 N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lV 331 (1255)
T KOG0444|consen 255 NKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LV 331 (1255)
T ss_pred Ccee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cC
Confidence 6555 34444455555666666666666 567777777777777777777542 37777888888888888888777 67
Q ss_pred CCCcCCCCCCceeecCCCCCCCC
Q 004637 305 PSCIGSNSLNRTVVSTWNCLSGV 327 (740)
Q Consensus 305 p~~~~~~~~l~~l~l~~N~l~~~ 327 (740)
|+++..+..|+.|.|+.|++-..
T Consensus 332 PEglcRC~kL~kL~L~~NrLiTL 354 (1255)
T KOG0444|consen 332 PEGLCRCVKLQKLKLDHNRLITL 354 (1255)
T ss_pred chhhhhhHHHHHhcccccceeec
Confidence 88888888888888888887653
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=208.16 Aligned_cols=139 Identities=18% Similarity=0.159 Sum_probs=110.9
Q ss_pred HHhcCCCCCCeeecCCCccEEEEEec--CCCEEEEEEeeccc-----ccChhHHHHHHHHHhhccCcccceeeceeeeec
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGFLT--DGSRVSVKCLKLKQ-----RHLPQSLMQHVELLSKLRHRHLVSILGHCILTY 520 (740)
Q Consensus 448 ~~~~~f~~~~~iG~G~fg~Vy~~~~~--~g~~vAvK~l~~~~-----~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~ 520 (740)
...++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+++|++++|+|+++.+..+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 34577999999999999999999854 57788999875321 12245689999999999999999533211
Q ss_pred cCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCC-CCCceeecCCCc
Q 004637 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL-KTENILLDKALT 599 (740)
Q Consensus 521 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl-Kp~NILld~~~~ 599 (740)
+..|+||||++|++|.... ... ...++.++++||+|||+ .+|+|||| ||+|||++.++.
T Consensus 91 -------~~~~LVmE~~~G~~L~~~~----~~~------~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ 150 (365)
T PRK09188 91 -------GKDGLVRGWTEGVPLHLAR----PHG------DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGE 150 (365)
T ss_pred -------CCcEEEEEccCCCCHHHhC----ccc------hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCC
Confidence 2369999999999996321 111 14678899999999999 79999999 999999999999
Q ss_pred eeEecCCCCCC
Q 004637 600 AKLSGYNIPLP 610 (740)
Q Consensus 600 ~kl~DFGla~~ 610 (740)
+||+|||+|+.
T Consensus 151 ikLiDFGlA~~ 161 (365)
T PRK09188 151 AAVIDFQLASV 161 (365)
T ss_pred EEEEECcccee
Confidence 99999999863
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=189.89 Aligned_cols=164 Identities=19% Similarity=0.158 Sum_probs=119.3
Q ss_pred cchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC----CCCC
Q 004637 540 GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS----KKGL 615 (740)
Q Consensus 540 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~----~~~~ 615 (740)
|+|.++++. ....++|.++..++.|+++||+|||+. + ||+|||++.++.+|+ ||.+... ..++
T Consensus 1 GsL~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~ 67 (176)
T smart00750 1 VSLADILEV--RGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVD 67 (176)
T ss_pred CcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccccCCCc
Confidence 689999963 245699999999999999999999983 3 999999999999999 9987532 2355
Q ss_pred CCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCcc-chhHHHHHHhhhcCCcccccccCccccCCCcHHHH-
Q 004637 616 ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEV-DGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSL- 693 (740)
Q Consensus 616 ~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~- 693 (740)
..|++||... ...++.++|||||||++|||+||+.||..... ......+....... ++... .......
T Consensus 68 ~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~ 137 (176)
T smart00750 68 PYFMAPEVIQ-GQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD--------DPRDR-SNLESVSA 137 (176)
T ss_pred ccccChHHhc-CCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC--------Ccccc-ccHHHHHh
Confidence 6677777765 45678999999999999999999999975332 11111111111110 00000 0111122
Q ss_pred -HHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 694 -RTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 694 -~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
..+.+++.+||..||++||++.|+++.+.....
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 257899999999999999999999999876643
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.6e-22 Score=194.33 Aligned_cols=179 Identities=13% Similarity=0.132 Sum_probs=134.9
Q ss_pred HhcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhH---------HHHHHHHHhhccCcccceeeceeeee
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQS---------LMQHVELLSKLRHRHLVSILGHCILT 519 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~---------~~~Ei~il~~l~H~nIv~l~g~~~~~ 519 (740)
..++|.+.+++|.|+||.||.+.. ++..+|||.+.......... +.+|++.+.+++|++|.....++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 457899999999999999999765 57789999997553332222 67899999999999999999886643
Q ss_pred ccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCc
Q 004637 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (740)
Q Consensus 520 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~ 599 (740)
...........++||||++|.+|.++.. ++. ....+++.++..+|+ .+++|||+||+||+++.++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCC-
Confidence 2222222456899999999999988741 222 245689999999999 7999999999999999988
Q ss_pred eeEecCCCCCCCCCCCCCccccccccCCCCCCCccceehhhHHHHHHH
Q 004637 600 AKLSGYNIPLPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVI 647 (740)
Q Consensus 600 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ell 647 (740)
++++|||.......... -.....+..|..++|+||||+++.-..
T Consensus 173 i~liDfg~~~~~~e~~a----~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKA----KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhh----HHHHHHHhHhcccccccceeEeehHHH
Confidence 99999998754422111 111222344567999999999876543
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.4e-24 Score=215.20 Aligned_cols=238 Identities=25% Similarity=0.295 Sum_probs=155.7
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCC-CcccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEEE
Q 004637 76 RVTELTVIGNKSSPAHSPKPTFG-KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (740)
Q Consensus 76 ~v~~l~l~~~~l~~~~~~~~~~~-~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (740)
.++.+++..|.++...+ .++ ...+..++.|+|++ ..+|++++++.+|..|+.+.|.+ ..+|++++.+..|+.|+
T Consensus 69 ~l~vl~~~~n~l~~lp~---aig~l~~l~~l~vs~n~l-s~lp~~i~s~~~l~~l~~s~n~~-~el~~~i~~~~~l~dl~ 143 (565)
T KOG0472|consen 69 CLTVLNVHDNKLSQLPA---AIGELEALKSLNVSHNKL-SELPEQIGSLISLVKLDCSSNEL-KELPDSIGRLLDLEDLD 143 (565)
T ss_pred ceeEEEeccchhhhCCH---HHHHHHHHHHhhcccchH-hhccHHHhhhhhhhhhhccccce-eecCchHHHHhhhhhhh
Confidence 45666666666632111 122 23455666666666 34566666777777777777777 45666677777777777
Q ss_pred cccCcCccccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCCEEECCCCCCCCCCcCC--CCCCcEEEcccCcCcccC
Q 004637 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEI 232 (740)
Q Consensus 155 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~L~~L~l~~N~l~~~~ 232 (740)
..+|+++ .+|+.++++.+|..|++.+|.+...+|+.-+++.|+.||...|-++..+|.. +.+|..|+|.+|++. .+
T Consensus 144 ~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~-~l 221 (565)
T KOG0472|consen 144 ATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR-FL 221 (565)
T ss_pred ccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc-cC
Confidence 7777776 6666677777777777777777776666545777777777777765444432 456666777777776 56
Q ss_pred CccccCCCCCcEEEccCCccccccchhhc-cCCCccEEecccccccccCCccccCCCCCCEEEccCccccccCCCCcCCC
Q 004637 233 PSGLKNFDQLKQFDISSNNFVGPIQSFLF-SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSN 311 (740)
Q Consensus 233 p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~ 311 (740)
| +|..|..|.+|+++.|++. .+|...+ +++++..|||..|++. ..|+.+.-+.+|+.||+|+|.+++ +|.+++++
T Consensus 222 P-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~-Lp~sLgnl 297 (565)
T KOG0472|consen 222 P-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS-LPYSLGNL 297 (565)
T ss_pred C-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc-CCcccccc
Confidence 6 6777777777777777776 5555554 6777777777777775 567777777777777777777773 56667776
Q ss_pred CCCceeecCCCCCC
Q 004637 312 SLNRTVVSTWNCLS 325 (740)
Q Consensus 312 ~~l~~l~l~~N~l~ 325 (740)
.|+.+.+.+|.+.
T Consensus 298 -hL~~L~leGNPlr 310 (565)
T KOG0472|consen 298 -HLKFLALEGNPLR 310 (565)
T ss_pred -eeeehhhcCCchH
Confidence 6677776666553
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.1e-21 Score=187.30 Aligned_cols=138 Identities=13% Similarity=0.117 Sum_probs=107.2
Q ss_pred CCeeecCCCccEEEEEecCCCEEEEEEeeccccc--C-------hhH-----------------HHHHHHHHhhccCccc
Q 004637 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--L-------PQS-----------------LMQHVELLSKLRHRHL 509 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~-------~~~-----------------~~~Ei~il~~l~H~nI 509 (740)
...||+|+||.||+|...+|+.||||+++..... . ... ..+|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4689999999999999878999999999754211 0 112 2349999999988877
Q ss_pred ceeeceeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHH-HcCCCCCceecCCC
Q 004637 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL-HTGVAPGIFGNNLK 588 (740)
Q Consensus 510 v~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDlK 588 (740)
.....+.. ...++||||++++++..... ....+++.+...++.|++.+|+|+ |+ .+|+|||||
T Consensus 82 ~~p~~~~~----------~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlk 145 (190)
T cd05147 82 PCPEPILL----------KSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQD---CRLVHADLS 145 (190)
T ss_pred CCCcEEEe----------cCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCC
Confidence 44332211 11389999999887765432 234688899999999999999999 56 699999999
Q ss_pred CCceeecCCCceeEecCCCCCC
Q 004637 589 TENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 589 p~NILld~~~~~kl~DFGla~~ 610 (740)
|+|||++ ++.++|+|||+|..
T Consensus 146 P~NIli~-~~~v~LiDFG~a~~ 166 (190)
T cd05147 146 EYNLLYH-DGKLYIIDVSQSVE 166 (190)
T ss_pred HHHEEEE-CCcEEEEEcccccc
Confidence 9999998 47899999999854
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=191.68 Aligned_cols=252 Identities=21% Similarity=0.231 Sum_probs=177.3
Q ss_pred CCCCCCeeecCCCccEEEEEecCC--CEEEEEEeecccccChhHHHHHHHHHhhccC----cccceeeceeeeeccCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLTDG--SRVSVKCLKLKQRHLPQSLMQHVELLSKLRH----RHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~~g--~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H----~nIv~l~g~~~~~~~~~~~ 525 (740)
+|.+.+.||+|+||.||+|..... ..+|+|............+..|+.++..+.. +++..+++... .
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~-------~ 91 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR-------S 91 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc-------C
Confidence 799999999999999999995543 4788888775533333378899999999973 47777765442 2
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC-----Cce
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-----LTA 600 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~-----~~~ 600 (740)
.+...|+||+.+ |.+|.++..... .+.++..+..+|+.|++.+|++||+ .|++||||||+|+++... ..+
T Consensus 92 ~~~~~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~ 166 (322)
T KOG1164|consen 92 TEDFNFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTL 166 (322)
T ss_pred CCceeEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceE
Confidence 445689999998 669999875433 5678999999999999999999999 799999999999999754 469
Q ss_pred eEecCCCCCCCC---C-CC--------CCccccccc------cCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhH
Q 004637 601 KLSGYNIPLPSK---K-GL--------ESPLRGQYV------SNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLK 662 (740)
Q Consensus 601 kl~DFGla~~~~---~-~~--------~~~~~~~~~------~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~ 662 (740)
.+.|||+++... . +. .....|+.- ....+.+.+.|+||++.++.|+..|..||.........
T Consensus 167 ~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~ 246 (322)
T KOG1164|consen 167 YLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLK 246 (322)
T ss_pred EEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchH
Confidence 999999997211 1 10 111112211 12334578899999999999999999999765433222
Q ss_pred HHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhh
Q 004637 663 LQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
..+........ ... .....+..+.++...+-..+..++|....+...++....
T Consensus 247 ~~~~~~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 247 SKFEKDPRKLL--TDR---------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred HHHHHHhhhhc--ccc---------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 22222111110 000 011112334455555666899999999999999877654
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-23 Score=212.59 Aligned_cols=244 Identities=20% Similarity=0.202 Sum_probs=213.7
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCCcccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEEEc
Q 004637 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (740)
Q Consensus 76 ~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (740)
.++.+.+++|.+..... .......+..+++++|++. ..|++++.+..++.|+.++|++ ..+|++++.+.+|+.|+.
T Consensus 46 ~l~~lils~N~l~~l~~--dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~l-s~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 46 DLQKLILSHNDLEVLRE--DLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKL-SELPEQIGSLISLVKLDC 121 (565)
T ss_pred chhhhhhccCchhhccH--hhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchH-hhccHHHhhhhhhhhhhc
Confidence 34567777777632211 1233456778899999885 5677899999999999999999 688999999999999999
Q ss_pred ccCcCccccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCCEEECCCCCCCCCCcCC--CCCCcEEEcccCcCcccCC
Q 004637 156 SSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIP 233 (740)
Q Consensus 156 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~L~~L~l~~N~l~~~~p 233 (740)
++|.+. ++|++++.+..|+.|+..+|+++..++++.++.+|..|++.+|++....|.. ++.|++|+...|-++ .+|
T Consensus 122 s~n~~~-el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP 199 (565)
T KOG0472|consen 122 SSNELK-ELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLP 199 (565)
T ss_pred ccccee-ecCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCC
Confidence 999999 8999999999999999999999999999999999999999999998877764 588999999999996 899
Q ss_pred ccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCcccc-CCCCCCEEEccCccccccCCCCcCCCC
Q 004637 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS-CSAKLNFVEISHNLLIGKLPSCIGSNS 312 (740)
Q Consensus 234 ~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~l~ls~N~l~~~~p~~~~~~~ 312 (740)
+.++.+.+|..|+|..|++. .+| .|.++..|.+|+++.|++. .+|.+.. ++..|.+|||..|+++ .+|..+.-+.
T Consensus 200 ~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLr 275 (565)
T KOG0472|consen 200 PELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLR 275 (565)
T ss_pred hhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhh
Confidence 99999999999999999999 677 7999999999999999997 6777665 8999999999999999 7899999999
Q ss_pred CCceeecCCCCCCCCCC
Q 004637 313 LNRTVVSTWNCLSGVNT 329 (740)
Q Consensus 313 ~l~~l~l~~N~l~~~~~ 329 (740)
+|..+|+++|.+++.++
T Consensus 276 sL~rLDlSNN~is~Lp~ 292 (565)
T KOG0472|consen 276 SLERLDLSNNDISSLPY 292 (565)
T ss_pred hhhhhcccCCccccCCc
Confidence 99999999999999765
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-19 Score=189.92 Aligned_cols=248 Identities=21% Similarity=0.315 Sum_probs=182.1
Q ss_pred CCCCCeeecCCCccEEEEEecCCCEEEEEEeeccccc---ChhHHHHHHHHHhhccCc-ccceeeceeeeeccCCCCCCC
Q 004637 453 FDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLRHR-HLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~~Ei~il~~l~H~-nIv~l~g~~~~~~~~~~~~~~ 528 (740)
|...+.||.|+||.||++... ..+|+|.+...... ....+.+|+.+++.+.|+ +|+++++++. ...
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~--------~~~ 71 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ--------DEG 71 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe--------cCC
Confidence 566788999999999999976 78999999865433 367899999999999988 7999998773 223
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC-ceeEecCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGYNI 607 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~-~~kl~DFGl 607 (740)
..++++||+.++++.+++........+.......++.|++.++.|+|+ .+++|||+||+||+++..+ .++++|||.
T Consensus 72 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~ 148 (384)
T COG0515 72 SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGL 148 (384)
T ss_pred EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCc
Confidence 379999999999999777431111268888999999999999999999 6899999999999999988 799999998
Q ss_pred CCCCC---------------CCCCCccccccccCC--CCCCCccceehhhHHHHHHHhCCCCCCCCcc----chhHHHHH
Q 004637 608 PLPSK---------------KGLESPLRGQYVSNQ--PGDGAKEDVYQLGVILLQVITGKQVKSTSEV----DGLKLQLE 666 (740)
Q Consensus 608 a~~~~---------------~~~~~~~~~~~~~~~--~~~~~ksDVwSfGvil~ElltG~~p~~~~~~----~~~~~~~~ 666 (740)
+.... .++..+.+|+..... ..+....|+||+|++++++++|..||..... ......+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 228 (384)
T COG0515 149 AKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228 (384)
T ss_pred ceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHH
Confidence 75221 123334555655543 4677899999999999999999999775543 12222221
Q ss_pred HhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 667 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
..... .......+ .........+.+++.+|+..+|..|.++.+....
T Consensus 229 ~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 229 ELPTP---SLASPLSP----SNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred hcCCc---ccccccCc----cccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11111 00000100 0001223456689999999999999999887765
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.2e-20 Score=179.72 Aligned_cols=140 Identities=16% Similarity=0.121 Sum_probs=109.3
Q ss_pred CCeeecCCCccEEEEEecCCCEEEEEEeecccccC--------------------------hhHHHHHHHHHhhccCccc
Q 004637 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL--------------------------PQSLMQHVELLSKLRHRHL 509 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--------------------------~~~~~~Ei~il~~l~H~nI 509 (740)
...||+|+||.||+|+..+|+.||||+++...... ...+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 57899999999999997789999999998542110 1123578999999999987
Q ss_pred ceeeceeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCC
Q 004637 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKT 589 (740)
Q Consensus 510 v~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp 589 (740)
.....+.. ...++||||++++++..... ....++......++.|++.++.|+|+. .+|+||||||
T Consensus 82 ~~p~~~~~----------~~~~lVmE~~~g~~~~~~~l---~~~~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlkP 146 (190)
T cd05145 82 PVPEPILL----------KKNVLVMEFIGDDGSPAPRL---KDVPLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLSE 146 (190)
T ss_pred CCceEEEe----------cCCEEEEEEecCCCchhhhh---hhccCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCCh
Confidence 54443321 11489999999876544321 123567788899999999999999983 5999999999
Q ss_pred CceeecCCCceeEecCCCCCCC
Q 004637 590 ENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 590 ~NILld~~~~~kl~DFGla~~~ 611 (740)
+||+++ ++.++|+|||++...
T Consensus 147 ~NIll~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 147 YNILYH-DGKPYIIDVSQAVEL 167 (190)
T ss_pred hhEEEE-CCCEEEEEcccceec
Confidence 999999 899999999998643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.1e-20 Score=210.40 Aligned_cols=223 Identities=23% Similarity=0.237 Sum_probs=140.6
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCCcccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCcccc----------
Q 004637 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKIN---------- 145 (740)
Q Consensus 76 ~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~---------- 145 (740)
+++.|++.+|+++. ++.. ..+|++|+|++|++.. +|.. .++|+.|+|++|.++ .+|..+.
T Consensus 223 ~L~~L~L~~N~Lt~-LP~l----p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~-~Lp~lp~~L~~L~Ls~N 292 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPAL----PPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLT-HLPALPSGLCKLWIFGN 292 (788)
T ss_pred CCCEEEccCCcCCC-CCCC----CCCCcEEEecCCccCc-ccCc---ccccceeeccCCchh-hhhhchhhcCEEECcCC
Confidence 45566666666543 2211 2356666666665543 2321 234444444444442 2222110
Q ss_pred -------CCCCCCEEEcccCcCccccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCCEEECCCCCCCCCCcCCCCCC
Q 004637 146 -------RFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNI 218 (740)
Q Consensus 146 -------~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L 218 (740)
.+++|+.|+|++|+|+ .+|... .+|+.|++++|+|++.+ .+ ..+|++|+|++|+|++ +|..+.+|
T Consensus 293 ~Lt~LP~~p~~L~~LdLS~N~L~-~Lp~lp---~~L~~L~Ls~N~L~~LP-~l--p~~Lq~LdLS~N~Ls~-LP~lp~~L 364 (788)
T PRK15387 293 QLTSLPVLPPGLQELSVSDNQLA-SLPALP---SELCKLWAYNNQLTSLP-TL--PSGLQELSVSDNQLAS-LPTLPSEL 364 (788)
T ss_pred ccccccccccccceeECCCCccc-cCCCCc---ccccccccccCcccccc-cc--ccccceEecCCCccCC-CCCCCccc
Confidence 1234555555555555 233321 23444555555554422 11 1468888888888875 55566778
Q ss_pred cEEEcccCcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCccccCCCCCCEEEccCc
Q 004637 219 VSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHN 298 (740)
Q Consensus 219 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N 298 (740)
+.|++++|+|+ .+|.. ..+|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|.. ..+|+.|++++|
T Consensus 365 ~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~N 432 (788)
T PRK15387 365 YKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRN 432 (788)
T ss_pred ceehhhccccc-cCccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccC
Confidence 88888888887 46653 3578899999999985 5543 3678899999999985 6753 346888999999
Q ss_pred cccccCCCCcCCCCCCceeecCCCCCCCCCC
Q 004637 299 LLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (740)
Q Consensus 299 ~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (740)
+|+ .+|..+..+..+..+++++|+|+|..+
T Consensus 433 qLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 433 QLT-RLPESLIHLSSETTVNLEGNPLSERTL 462 (788)
T ss_pred ccc-ccChHHhhccCCCeEECCCCCCCchHH
Confidence 998 789999999999999999999998755
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.9e-20 Score=212.82 Aligned_cols=230 Identities=22% Similarity=0.262 Sum_probs=166.7
Q ss_pred EeCCCCEEEEEeCCCCCCCCCCCCCcCCCcccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCC
Q 004637 71 VCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSL 150 (740)
Q Consensus 71 ~C~~~~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 150 (740)
.|-....+.|++++++++...... ...+..|+|++|.+.. +|..+. ++|+.|+|++|+|+ .+|..+. .+|
T Consensus 174 ~Cl~~~~~~L~L~~~~LtsLP~~I----p~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L 243 (754)
T PRK15370 174 DCLKNNKTELRLKILGLTTIPACI----PEQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTI 243 (754)
T ss_pred hhcccCceEEEeCCCCcCcCCccc----ccCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccc
Confidence 465567788888888876422111 2467888898888864 555443 58889999988885 5676554 478
Q ss_pred CEEEcccCcCccccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCCEEECCCCCCCCCCcCCCCCCcEEEcccCcCcc
Q 004637 151 EVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS 230 (740)
Q Consensus 151 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~l~~N~l~~ 230 (740)
+.|+|++|++. .+|..+. ++|+.|+|++|+|+..+..+. .+|+.|+|++|+|++..+....+|+.|++++|+++.
T Consensus 244 ~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp~sL~~L~Ls~N~Lt~ 318 (754)
T PRK15370 244 QEMELSINRIT-ELPERLP--SALQSLDLFHNKISCLPENLP--EELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTA 318 (754)
T ss_pred cEEECcCCccC-cCChhHh--CCCCEEECcCCccCccccccC--CCCcEEECCCCccccCcccchhhHHHHHhcCCcccc
Confidence 88999999888 7887764 578889999888886555453 478888999888876544445678888888888874
Q ss_pred cCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCccccCCCCCCEEEccCccccccCCCCcCC
Q 004637 231 EIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310 (740)
Q Consensus 231 ~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~ 310 (740)
+|..+. ++|+.|++++|.|++ +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+.
T Consensus 319 -LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~- 387 (754)
T PRK15370 319 -LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP- 387 (754)
T ss_pred -CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH-
Confidence 565443 578888888888885 565553 68888888888887 4666553 57888888888888 4565553
Q ss_pred CCCCceeecCCCCCCCC
Q 004637 311 NSLNRTVVSTWNCLSGV 327 (740)
Q Consensus 311 ~~~l~~l~l~~N~l~~~ 327 (740)
..|+.|++++|++++.
T Consensus 388 -~sL~~LdLs~N~L~~L 403 (754)
T PRK15370 388 -AALQIMQASRNNLVRL 403 (754)
T ss_pred -HHHHHHhhccCCcccC
Confidence 3577888888888753
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-20 Score=213.76 Aligned_cols=245 Identities=19% Similarity=0.211 Sum_probs=170.7
Q ss_pred CCCCeeecCCCccEEEEE-ecCCCEEEEEEeecc--cc----cChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 454 DPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QR----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 454 ~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~--~~----~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
...+++|.|++|.|+.+. .......+.|..+.. .. .....+..|..+-..++|||++..+..+...
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~------- 393 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI------- 393 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc-------
Confidence 346889999999888776 333444555543311 11 1112256678888889999998887665421
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
....-+||||++ +|..++.. ...+....+-.++.|+..|++|+|+ .||.|||+|++|++++.+|.+||+|||
T Consensus 394 -~~~~~~mE~~~~-Dlf~~~~~---~~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 394 -DGILQSMEYCPY-DLFSLVMS---NGKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred -ccchhhhhcccH-HHHHHHhc---ccccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecC
Confidence 223334999999 99999853 3457778889999999999999999 899999999999999999999999999
Q ss_pred CCCCC-------------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCC
Q 004637 607 IPLPS-------------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673 (740)
Q Consensus 607 la~~~-------------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 673 (740)
.+... ..+...|.+||............||||.||++..|++|+.||......+-... ......
T Consensus 466 ~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~--~~~~~~- 542 (601)
T KOG0590|consen 466 AASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK--TNNYSD- 542 (601)
T ss_pred cceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh--hhcccc-
Confidence 87321 22445577777776665666789999999999999999999975432221100 000000
Q ss_pred cccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 674 ~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
....... ........+.+...++.++++.||.+|.|+++|+++
T Consensus 543 --~~~~~~~--~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 543 --QRNIFEG--PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred --ccccccC--hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 0000000 001122334556789999999999999999999975
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.8e-19 Score=173.19 Aligned_cols=138 Identities=12% Similarity=0.150 Sum_probs=105.7
Q ss_pred CCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhc-----cCcccceeeceeeeeccCCCCCCC
Q 004637 454 DPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-----RHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 454 ~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l-----~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+..+.||+|+||.||. .-.++.. +||++........+.+.+|+++++.+ .||||++++|++... ...+
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~-----~g~g 77 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD-----CGTG 77 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC-----CCCe
Confidence 4468899999999996 3334444 79988765444567899999999999 579999999988532 1123
Q ss_pred c-eEEEEec--ccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHH-HHHHcCCCCCceecCCCCCceeecC----CCce
Q 004637 529 T-VFLVLEH--ISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV-QFLHTGVAPGIFGNNLKTENILLDK----ALTA 600 (740)
Q Consensus 529 ~-~~lV~Ey--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~iiHrDlKp~NILld~----~~~~ 600 (740)
. +.+|+|| +++|+|.+++.+ ..+++. ..++.+++.++ +|||+ .+|+||||||+|||++. +..+
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~----~~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQ----CRYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHc----ccccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcE
Confidence 3 3488999 668999999953 235544 35678888888 99999 79999999999999974 3489
Q ss_pred eEecCCC
Q 004637 601 KLSGYNI 607 (740)
Q Consensus 601 kl~DFGl 607 (740)
+|+||+.
T Consensus 149 ~LiDg~G 155 (210)
T PRK10345 149 VVCDNIG 155 (210)
T ss_pred EEEECCC
Confidence 9999544
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.5e-19 Score=169.68 Aligned_cols=178 Identities=12% Similarity=0.071 Sum_probs=129.0
Q ss_pred CCCCeeecCCCccEEEEEecCCCEEEEEEeecccccC----hhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCCCCC
Q 004637 454 DPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL----PQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 454 ~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~----~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
.+...|++|+||+||.+.. ++.+++.+.+.....-. ...+.+|+++|+++. |++|++++++.
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~------------ 71 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD------------ 71 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc------------
Confidence 3467899999999997766 67788877776443211 125789999999995 58899888742
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCC-CCCceeecCCCceeEecCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL-KTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl-Kp~NILld~~~~~kl~DFGl 607 (740)
..+++|||++|.+|.+.+.. . ...++.|++++|+++|+ .+|+|||| ||+|||++.++.++|+|||+
T Consensus 72 ~~~lvmeyI~G~~L~~~~~~----~------~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~ 138 (218)
T PRK12274 72 GRHLDRSYLAGAAMYQRPPR----G------DLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQL 138 (218)
T ss_pred CEEEEEeeecCccHHhhhhh----h------hHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCC
Confidence 15999999999888765421 1 13577899999999999 79999999 79999999999999999999
Q ss_pred CCCCCCCCCC-----------------ccccccccCC-----CCCC-CccceehhhHHHHHHHhCCCCCCCCc
Q 004637 608 PLPSKKGLES-----------------PLRGQYVSNQ-----PGDG-AKEDVYQLGVILLQVITGKQVKSTSE 657 (740)
Q Consensus 608 a~~~~~~~~~-----------------~~~~~~~~~~-----~~~~-~ksDVwSfGvil~ElltG~~p~~~~~ 657 (740)
|......... .+++++.... ...+ ...+.++-|.-+|.++||+.++..+.
T Consensus 139 A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 139 AVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred ceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 9644332210 0122221110 0111 34578899999999999998876543
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.3e-21 Score=171.41 Aligned_cols=154 Identities=27% Similarity=0.398 Sum_probs=104.9
Q ss_pred hcCCCCCcEeecccccCccCCCccccCCCCCCEEEcccCcCccccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCCE
Q 004637 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEE 199 (740)
Q Consensus 120 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~ 199 (740)
+.++++.+.|.|++|.+ ..+|+.+..|.+|+.|++++|++. .+|..++.|++|+.|+++-|++.-.+..|+.++.|+.
T Consensus 29 Lf~~s~ITrLtLSHNKl-~~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~lev 106 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKL-TVVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALEV 106 (264)
T ss_pred ccchhhhhhhhcccCce-eecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhhcCccccCCCchhhh
Confidence 44567777888888888 466778889999999999999998 8899999999999999999999888888999999999
Q ss_pred EECCCCCCCC-CCcCCC---CCCcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEeccccc
Q 004637 200 LNLGGNDFGP-KFPSLS---KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQ 275 (740)
Q Consensus 200 L~L~~N~l~~-~~p~~~---~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 275 (740)
|||.+|++.. .+|+.| ..|..|+|++|.+. .+|..++++++|+.|.+..|.+- .+|..++.+..|++|.+.+|+
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccce
Confidence 9999988863 233322 23334444444443 44444555555555555555444 344444444444444444444
Q ss_pred cc
Q 004637 276 LS 277 (740)
Q Consensus 276 l~ 277 (740)
++
T Consensus 185 l~ 186 (264)
T KOG0617|consen 185 LT 186 (264)
T ss_pred ee
Confidence 44
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-20 Score=187.96 Aligned_cols=268 Identities=17% Similarity=0.113 Sum_probs=203.6
Q ss_pred CCCCCCCCCCcccEEeCCC-----------CEEEEEeCCCCCCCCCCCCCcCCCcccccccccCCcCCChhhhhhcCCCC
Q 004637 57 TNFCYLPSSSSLKIVCTNS-----------RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSN 125 (740)
Q Consensus 57 ~~~C~~~~~~~~~v~C~~~-----------~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~ 125 (740)
+.+|.|.+....-|.|+.. ..++|+|..|+|+ .+++..|-.+..|++||||+|+|..+-|++|.+|.+
T Consensus 38 P~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~ 116 (498)
T KOG4237|consen 38 PAPCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLAS 116 (498)
T ss_pred CCCcccCCCCCceEEccCCCcccCcccCCCcceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHh
Confidence 4578776533334899743 4577888888884 555655666678888888888888888888888888
Q ss_pred CcEeeccc-ccCccCCCccccCCCCCCEEEcccCcCccccCcccCCCCCCCeeeccCccCcccCC-CCCCCCCCCEEECC
Q 004637 126 LKVLSLVS-LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP-DLQRLVLLEELNLG 203 (740)
Q Consensus 126 L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~ 203 (740)
|..|-+.+ |+|+...-..|++|..|+.|.+.-|++.-...+.|..|++|..|.|.+|.+..+.. .|..+.+++.+.+.
T Consensus 117 l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA 196 (498)
T KOG4237|consen 117 LLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLA 196 (498)
T ss_pred hhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhh
Confidence 88777776 66743333678888888888888888885555668888888888888888887666 48888888888888
Q ss_pred CCCCCC------------CCcCC---C----------------------CCCcEE---EcccCcCcccCC-ccccCCCCC
Q 004637 204 GNDFGP------------KFPSL---S----------------------KNIVSV---ILRNNSLRSEIP-SGLKNFDQL 242 (740)
Q Consensus 204 ~N~l~~------------~~p~~---~----------------------~~L~~L---~l~~N~l~~~~p-~~~~~l~~L 242 (740)
.|.+-- ..|.. + ..++.+ ..+.+..-+.-| ..|..|++|
T Consensus 197 ~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L 276 (498)
T KOG4237|consen 197 QNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNL 276 (498)
T ss_pred cCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccc
Confidence 887410 01100 0 011111 223333444556 468999999
Q ss_pred cEEEccCCccccccchhhccCCCccEEecccccccccCCccccCCCCCCEEEccCccccccCCCCcCCCCCCceeecCCC
Q 004637 243 KQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWN 322 (740)
Q Consensus 243 ~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~l~~l~l~~N 322 (740)
+.|+|++|++++.-+.+|.++..+++|+|..|+|...-...|.++++|+.|+|.+|+|+-.-|..|..+..|..+++-.|
T Consensus 277 ~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~N 356 (498)
T KOG4237|consen 277 RKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSN 356 (498)
T ss_pred eEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccC
Confidence 99999999999999999999999999999999998766677889999999999999999999999999999999999887
Q ss_pred CCC
Q 004637 323 CLS 325 (740)
Q Consensus 323 ~l~ 325 (740)
.+.
T Consensus 357 p~~ 359 (498)
T KOG4237|consen 357 PFN 359 (498)
T ss_pred ccc
Confidence 764
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.3e-19 Score=200.14 Aligned_cols=209 Identities=22% Similarity=0.200 Sum_probs=160.4
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCCcccccccccCCcCCChhhh---hhc--------------CCCCCcEeecccccCc
Q 004637 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFT---ILT--------------KLSNLKVLSLVSLGLW 137 (740)
Q Consensus 75 ~~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~---~~~--------------~l~~L~~L~L~~n~l~ 137 (740)
..++.|+|++|.|+.. +.. ..+|..|+|++|.+.. +|. .+. .+++|+.|+|++|+|+
T Consensus 242 ~~Lk~LdLs~N~LtsL-P~l----p~sL~~L~Ls~N~L~~-Lp~lp~~L~~L~Ls~N~Lt~LP~~p~~L~~LdLS~N~L~ 315 (788)
T PRK15387 242 PELRTLEVSGNQLTSL-PVL----PPGLLELSIFSNPLTH-LPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLA 315 (788)
T ss_pred CCCcEEEecCCccCcc-cCc----ccccceeeccCCchhh-hhhchhhcCEEECcCCccccccccccccceeECCCCccc
Confidence 3678899999988643 221 1355555555554432 111 111 2368999999999997
Q ss_pred cCCCccccCCCCCCEEEcccCcCccccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCCEEECCCCCCCCCCcCCCCC
Q 004637 138 GPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKN 217 (740)
Q Consensus 138 ~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 217 (740)
+ +|.. ..+|+.|++++|+|+ .+|.. ..+|+.|+|++|+|++.++. ..+|+.|++++|+|+. +|..+.+
T Consensus 316 ~-Lp~l---p~~L~~L~Ls~N~L~-~LP~l---p~~Lq~LdLS~N~Ls~LP~l---p~~L~~L~Ls~N~L~~-LP~l~~~ 383 (788)
T PRK15387 316 S-LPAL---PSELCKLWAYNNQLT-SLPTL---PSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLTS-LPALPSG 383 (788)
T ss_pred c-CCCC---cccccccccccCccc-ccccc---ccccceEecCCCccCCCCCC---Ccccceehhhcccccc-Ccccccc
Confidence 5 5542 246889999999998 57752 25899999999999986553 3578889999999985 7777789
Q ss_pred CcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCccccCCCCCCEEEccC
Q 004637 218 IVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297 (740)
Q Consensus 218 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~ 297 (740)
|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|... .+|+.|+|++|+|+ .+|..+.++++|+.|+|++
T Consensus 384 L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~ 454 (788)
T PRK15387 384 LKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 454 (788)
T ss_pred cceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCC
Confidence 9999999999984 6754 3679999999999995 66543 46889999999998 6899999999999999999
Q ss_pred ccccccCCCCcCC
Q 004637 298 NLLIGKLPSCIGS 310 (740)
Q Consensus 298 N~l~~~~p~~~~~ 310 (740)
|.|+|..|..+..
T Consensus 455 N~Ls~~~~~~L~~ 467 (788)
T PRK15387 455 NPLSERTLQALRE 467 (788)
T ss_pred CCCCchHHHHHHH
Confidence 9999988776633
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.9e-18 Score=184.82 Aligned_cols=206 Identities=20% Similarity=0.296 Sum_probs=150.2
Q ss_pred HhhccCcccceeeceeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 004637 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAP 580 (740)
Q Consensus 501 l~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 580 (740)
|+.+.|.|+.+++|.+.. +...+.|.+||..|+|.|.+.. ....++|.....+++++++||+|+|.. +
T Consensus 1 l~~l~h~n~~~f~g~~~~--------~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s--~ 68 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD--------GPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNS--P 68 (484)
T ss_pred CcccchhhhhhheeeEec--------CCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcC--c
Confidence 457889999999999973 3568999999999999999964 455689999999999999999999983 3
Q ss_pred CceecCCCCCceeecCCCceeEecCCCCCCCCCC------C-----CCccccccccCC------CCCCCccceehhhHHH
Q 004637 581 GIFGNNLKTENILLDKALTAKLSGYNIPLPSKKG------L-----ESPLRGQYVSNQ------PGDGAKEDVYQLGVIL 643 (740)
Q Consensus 581 ~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~------~-----~~~~~~~~~~~~------~~~~~ksDVwSfGvil 643 (740)
-..|+.++++|+++|....+|++|||+....... . .-+.+||..... +..+.++||||||+++
T Consensus 69 i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~ 148 (484)
T KOG1023|consen 69 IGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM 148 (484)
T ss_pred ceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence 3399999999999999999999999997554320 0 002234333221 1246789999999999
Q ss_pred HHHHhCCCCCCCCccc----hhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 644 LQVITGKQVKSTSEVD----GLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 644 ~ElltG~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
+|+++.+.||+..... ++...++. .. .....|.+.... +....+..++..||..+|++||++++|-.
T Consensus 149 ~ei~~r~~~~~~~~~~~~~~eii~~~~~---~~----~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 149 YEILFRSGPFDLRNLVEDPDEIILRVKK---GG----SNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred HHHHhccCccccccccCChHHHHHHHHh---cC----CCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 9999999999853221 22222222 01 111112211110 23336789999999999999999999998
Q ss_pred Hhhhhhhc
Q 004637 720 NLQYSIQV 727 (740)
Q Consensus 720 ~L~~~~~~ 727 (740)
.++.....
T Consensus 220 ~~~~~~~~ 227 (484)
T KOG1023|consen 220 KLLTINKG 227 (484)
T ss_pred hhhhhccc
Confidence 88766543
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.5e-18 Score=161.27 Aligned_cols=196 Identities=16% Similarity=0.215 Sum_probs=145.9
Q ss_pred HhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhccCc-ccceeeceeeeeccCCCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHR-HLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~-nIv~l~g~~~~~~~~~~~~ 526 (740)
...+|.+.++||.|+||.+|.|. ..+|..||||.-..... ..++..|..+.+.++|- .|..+.-|. .+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~--------~e 82 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYG--------TE 82 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhc--------cc
Confidence 34679999999999999999998 77899999998654332 24678889999888753 343333332 24
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC---CCceeEe
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---ALTAKLS 603 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~---~~~~kl~ 603 (740)
..+-.+|||.. |.+|+++..- -...++..+++-.+-|+..-++|+|. +++|||||||+|.|..- ...+.++
T Consensus 83 ~~ynvlVMdLL-GPsLEdLfnf--C~R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LI 156 (341)
T KOG1163|consen 83 KDYNVLVMDLL-GPSLEDLFNF--CSRRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLI 156 (341)
T ss_pred cccceeeeecc-CccHHHHHHH--HhhhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEE
Confidence 45678999998 6799998752 34568888999999999999999998 79999999999999863 3568999
Q ss_pred cCCCCCCCCCCCCC---------cccccccc------CCCCCCCccceehhhHHHHHHHhCCCCCCCCccch
Q 004637 604 GYNIPLPSKKGLES---------PLRGQYVS------NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDG 660 (740)
Q Consensus 604 DFGla~~~~~~~~~---------~~~~~~~~------~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~ 660 (740)
|||+|+........ ...|+.-+ ...+.+.+-|+=|+|.+|...--|.-||.+.....
T Consensus 157 DFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t 228 (341)
T KOG1163|consen 157 DFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT 228 (341)
T ss_pred eccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhh
Confidence 99999643322111 11111111 11233567899999999999999999999765443
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3e-19 Score=200.59 Aligned_cols=239 Identities=18% Similarity=0.212 Sum_probs=171.2
Q ss_pred CCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccc-cChhHHHHHHHH--HhhccCcccceeeceeeeeccCCCCCCC
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVEL--LSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~~Ei~i--l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+|...+.+|++.|=+|.+|+.+.|. |+||++-+... -..+.|.++++- ....+|||.+++.-.- ....
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~--------~t~k 94 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVL--------VTDK 94 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHH--------HhhH
Confidence 5666789999999999999988887 88999875542 223444444333 4455899999886542 2445
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..|||=+|..+ +|+|.+. -+..+...+.+.|+.|+..|+.-+|. .+|+|+|||.+|||++.-.-+.|+||..-
T Consensus 95 AAylvRqyvkh-nLyDRlS---TRPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsF 167 (1431)
T KOG1240|consen 95 AAYLVRQYVKH-NLYDRLS---TRPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASF 167 (1431)
T ss_pred HHHHHHHHHhh-hhhhhhc---cchHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhccccc
Confidence 57889999977 9999984 34456777889999999999999999 89999999999999999999999999764
Q ss_pred CCCC----------------CCCCCccccccccCCC----------CCCCccceehhhHHHHHHHh-CCCCCCCCccchh
Q 004637 609 LPSK----------------KGLESPLRGQYVSNQP----------GDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGL 661 (740)
Q Consensus 609 ~~~~----------------~~~~~~~~~~~~~~~~----------~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~ 661 (740)
++.. .....|.+||.+.... ..+++-||||.||+++||++ |++||.-. ++
T Consensus 168 KPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS---QL 244 (1431)
T KOG1240|consen 168 KPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS---QL 244 (1431)
T ss_pred CCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH---HH
Confidence 4321 1112255666544321 24678899999999999998 78888621 12
Q ss_pred HHHHHHhhhcCC-cccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 662 KLQLETCLAEAP-SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 662 ~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
..+.... ...+ ..+..+-|+.++ +++..|++.||++|-++++.++.-.
T Consensus 245 ~aYr~~~-~~~~e~~Le~Ied~~~R------------nlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 245 LAYRSGN-ADDPEQLLEKIEDVSLR------------NLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred HhHhccC-ccCHHHHHHhCcCccHH------------HHHHHHHccCchhccCHHHHHHhhh
Confidence 2111111 1111 112333344443 8999999999999999999998743
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.4e-18 Score=171.05 Aligned_cols=140 Identities=14% Similarity=0.116 Sum_probs=108.9
Q ss_pred CCCCCCeeecCCCccEEEEE--ecCCCEEEEEEeeccccc------------------------ChhHHHHHHHHHhhcc
Q 004637 452 NFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKLKQRH------------------------LPQSLMQHVELLSKLR 505 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~--~~~g~~vAvK~l~~~~~~------------------------~~~~~~~Ei~il~~l~ 505 (740)
.|++.+.||+|+||.||+|+ ..+|+.||||+++..... ....+.+|+++++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999998 568999999999754210 0123568999999997
Q ss_pred Ccc--cceeeceeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC-c
Q 004637 506 HRH--LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG-I 582 (740)
Q Consensus 506 H~n--Iv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-i 582 (740)
+.. +.+++++ ...++||||+++++|..+.. ........+...++.|++.+++|||. .+ |
T Consensus 109 ~~~i~~p~~~~~------------~~~~lV~E~~~g~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~---~g~i 170 (237)
T smart00090 109 EAGVPVPKPIAW------------RRNVLVMEFIGGDGLPAPRL---KDVEPEEEEEFELYDDILEEMRKLYK---EGEL 170 (237)
T ss_pred hcCCCCCeeeEe------------cCceEEEEEecCCccccccc---ccCCcchHHHHHHHHHHHHHHHHHHh---cCCE
Confidence 632 3333321 11489999999988877652 12335556678899999999999999 68 9
Q ss_pred eecCCCCCceeecCCCceeEecCCCCCC
Q 004637 583 FGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 583 iHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
+||||||+||+++ ++.++|+|||.+..
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhc
Confidence 9999999999999 88999999998753
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.3e-20 Score=203.08 Aligned_cols=238 Identities=23% Similarity=0.249 Sum_probs=188.0
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCCcccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEEEc
Q 004637 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (740)
Q Consensus 76 ~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (740)
+++.|..+.|.++ .+.. .+-..+++++++++|++.+.. +++..+.+|+.|+..+|+| ..+|..+...++|+.|+.
T Consensus 220 ~l~~L~a~~n~l~-~~~~--~p~p~nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l-~~lp~ri~~~~~L~~l~~ 294 (1081)
T KOG0618|consen 220 SLTALYADHNPLT-TLDV--HPVPLNLQYLDISHNNLSNLP-EWIGACANLEALNANHNRL-VALPLRISRITSLVSLSA 294 (1081)
T ss_pred chheeeeccCcce-eecc--ccccccceeeecchhhhhcch-HHHHhcccceEecccchhH-HhhHHHHhhhhhHHHHHh
Confidence 4555555556554 1111 222357888999999886654 8899999999999999999 678888888999999999
Q ss_pred ccCcCccccCcccCCCCCCCeeeccCccCcccCCCC--------------------------CCCCCCCEEECCCCCCCC
Q 004637 156 SSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDL--------------------------QRLVLLEELNLGGNDFGP 209 (740)
Q Consensus 156 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~--------------------------~~l~~L~~L~L~~N~l~~ 209 (740)
.+|.+. .+|+...+++.|++|+|..|+|...++.+ ..+..|+.|+|.+|+|+.
T Consensus 295 ~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd 373 (1081)
T KOG0618|consen 295 AYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTD 373 (1081)
T ss_pred hhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccc
Confidence 999998 88888888999999999999988766511 123457778888888875
Q ss_pred CC-cC--CCCCCcEEEcccCcCcccCC-ccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCcccc
Q 004637 210 KF-PS--LSKNIVSVILRNNSLRSEIP-SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285 (740)
Q Consensus 210 ~~-p~--~~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 285 (740)
.. |- .+.+|+.|+|++|+|. .+| ..+.++..|++|+||+|+|+ .+|+.+.+++.|++|...+|++. .+| .+.
T Consensus 374 ~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~ 449 (1081)
T KOG0618|consen 374 SCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELA 449 (1081)
T ss_pred cchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhh
Confidence 43 32 2579999999999997 555 56889999999999999999 78899999999999999999997 578 789
Q ss_pred CCCCCCEEEccCcccccc-CCCCcCCCCCCceeecCCCCC
Q 004637 286 CSAKLNFVEISHNLLIGK-LPSCIGSNSLNRTVVSTWNCL 324 (740)
Q Consensus 286 ~l~~L~~l~ls~N~l~~~-~p~~~~~~~~l~~l~l~~N~l 324 (740)
.++.|+++|+|.|+|+-. +|.... .++|+.||+++|.-
T Consensus 450 ~l~qL~~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 450 QLPQLKVLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNTR 488 (1081)
T ss_pred hcCcceEEecccchhhhhhhhhhCC-CcccceeeccCCcc
Confidence 999999999999999843 344333 37899999999973
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.2e-17 Score=163.59 Aligned_cols=202 Identities=17% Similarity=0.250 Sum_probs=153.5
Q ss_pred cCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
-+|.+.++||+|+||+.+.|+ +-+++.||||.-..+.+ ..++..|.+..+.|. .+.|..+|-|- ..+.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFG--------qeG~ 97 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFG--------QEGK 97 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeec--------cccc
Confidence 468899999999999999999 67899999997654432 246778888888774 67887776332 3566
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC-----CceeEe
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-----LTAKLS 603 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~-----~~~kl~ 603 (740)
+-.||+|.. |.+|+|+..- ..+.++..++.-+|.|++.-++|+|+ +..|.|||||+|+||... ..+.+.
T Consensus 98 ~NiLVidLL-GPSLEDLFD~--CgR~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~Ihii 171 (449)
T KOG1165|consen 98 YNILVIDLL-GPSLEDLFDL--CGRRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHII 171 (449)
T ss_pred hhhhhhhhh-CcCHHHHHHH--hcCcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEE
Confidence 789999998 6789887742 34568999999999999999999999 799999999999999643 468999
Q ss_pred cCCCCCCCCCCCCCc---------cccc--cc----cCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHh
Q 004637 604 GYNIPLPSKKGLESP---------LRGQ--YV----SNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETC 668 (740)
Q Consensus 604 DFGla~~~~~~~~~~---------~~~~--~~----~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~ 668 (740)
|||+|+......... ..|+ |+ ..+.+.+.+-|.=|+|=+++..+-|..||.+...+...+..++.
T Consensus 172 DFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKI 251 (449)
T KOG1165|consen 172 DFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKI 251 (449)
T ss_pred eccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHh
Confidence 999997543221111 1111 11 11345567889999999999999999999987766555554443
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-17 Score=202.97 Aligned_cols=217 Identities=20% Similarity=0.187 Sum_probs=146.5
Q ss_pred CCEEEEEeCCCCCCCCCCCCCcCCCcccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEEE
Q 004637 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (740)
Q Consensus 75 ~~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (740)
..++.|++.++.+. .++. .+...+|..|+|++|.+. .++..+..+++|+.|+|++|...+.+|. ++.+++|+.|+
T Consensus 589 ~~Lr~L~~~~~~l~-~lP~--~f~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~ 663 (1153)
T PLN03210 589 PKLRLLRWDKYPLR-CMPS--NFRPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLK 663 (1153)
T ss_pred cccEEEEecCCCCC-CCCC--cCCccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEE
Confidence 35777888887663 2222 334567888888888764 4566678888888888887766577774 78888888888
Q ss_pred cccCcCccccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCCEEECCCCCCCCCCcCCCCCCcEEEcccCcCcccCCc
Q 004637 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS 234 (740)
Q Consensus 155 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~l~~N~l~~~~p~ 234 (740)
|++|.....+|..+++|++|+.|+|++|..-+.+|...++++|+.|+|++|...+.+|....+|+.|+|++|.++ .+|.
T Consensus 664 L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~ 742 (1153)
T PLN03210 664 LSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-EFPS 742 (1153)
T ss_pred ecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccccCCcCeeecCCCccc-cccc
Confidence 888776668888888888888888888654444454337788888888887766666666667777777777765 4443
Q ss_pred cc------------------------------cCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCccc
Q 004637 235 GL------------------------------KNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284 (740)
Q Consensus 235 ~~------------------------------~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 284 (740)
.+ ..+++|+.|+|++|...+.+|..++++++|+.|++++|...+.+|..+
T Consensus 743 ~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~ 822 (1153)
T PLN03210 743 NLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI 822 (1153)
T ss_pred cccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC
Confidence 22 012356666666666666677777777777777777654334555544
Q ss_pred cCCCCCCEEEccCc
Q 004637 285 SCSAKLNFVEISHN 298 (740)
Q Consensus 285 ~~l~~L~~l~ls~N 298 (740)
++++|+.|++++|
T Consensus 823 -~L~sL~~L~Ls~c 835 (1153)
T PLN03210 823 -NLESLESLDLSGC 835 (1153)
T ss_pred -CccccCEEECCCC
Confidence 4445555555544
|
syringae 6; Provisional |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.3e-20 Score=166.07 Aligned_cols=161 Identities=25% Similarity=0.378 Sum_probs=135.5
Q ss_pred ccCCCCCCEEEcccCcCccccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCCEEECCCCCCCCCCcCCCCCCcEEEc
Q 004637 144 INRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVIL 223 (740)
Q Consensus 144 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~l 223 (740)
+.++.+.+.|-||+|+++ .+|+.+..|.+|+.|++++|+++..++.+..++.|+.|+++-|++
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl---------------- 91 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRL---------------- 91 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhh----------------
Confidence 456677888899999998 889999999999999999999999988999999999999888877
Q ss_pred ccCcCcccCCccccCCCCCcEEEccCCcccc-ccchhhccCCCccEEecccccccccCCccccCCCCCCEEEccCccccc
Q 004637 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302 (740)
Q Consensus 224 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 302 (740)
..+|..|+.++.|+.|||+.|+++. .+|..|..+..|+-|+|+.|.|. .+|..++++++|+.|.+..|.+-
T Consensus 92 ------~~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll- 163 (264)
T KOG0617|consen 92 ------NILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL- 163 (264)
T ss_pred ------hcCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-
Confidence 3678888888888888888888863 56888888888888888888886 67888888888888888888877
Q ss_pred cCCCCcCCCCCCceeecCCCCCCCCCC
Q 004637 303 KLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (740)
Q Consensus 303 ~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (740)
.+|..++.+..|+.|.+.+|+++-.+|
T Consensus 164 ~lpkeig~lt~lrelhiqgnrl~vlpp 190 (264)
T KOG0617|consen 164 SLPKEIGDLTRLRELHIQGNRLTVLPP 190 (264)
T ss_pred hCcHHHHHHHHHHHHhcccceeeecCh
Confidence 578888888888888888888877655
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.73 E-value=5e-17 Score=199.83 Aligned_cols=215 Identities=19% Similarity=0.145 Sum_probs=167.2
Q ss_pred cccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEEEcccCcCccccCcccCCCCCCCeeec
Q 004637 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (740)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 179 (740)
..++.|++.+|.+ ..+|..| .+.+|+.|+|.+|++ ..+|..+..+++|+.|+|++|...+.+|. ++.+++|+.|+|
T Consensus 589 ~~Lr~L~~~~~~l-~~lP~~f-~~~~L~~L~L~~s~l-~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L 664 (1153)
T PLN03210 589 PKLRLLRWDKYPL-RCMPSNF-RPENLVKLQMQGSKL-EKLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKL 664 (1153)
T ss_pred cccEEEEecCCCC-CCCCCcC-CccCCcEEECcCccc-cccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEe
Confidence 3688888988766 5566666 579999999999999 56888899999999999999876668885 888999999999
Q ss_pred cCccC-cccCCCCCCCCCCCEEECCCCCCCCCCcCC--CCCCcEEEcccCcCcccCCccccCCCCCcEEEccCCcccccc
Q 004637 180 ADNLL-NGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI 256 (740)
Q Consensus 180 ~~N~l-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~ 256 (740)
++|.. ...+..+.++++|+.|++++|..-..+|.. +++|+.|+|++|...+.+|.. .++|+.|+|++|.+. .+
T Consensus 665 ~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~l 740 (1153)
T PLN03210 665 SDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EF 740 (1153)
T ss_pred cCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cc
Confidence 99864 444446999999999999997655666653 689999999999877777754 467899999999987 45
Q ss_pred chhh------------------------------ccCCCccEEecccccccccCCccccCCCCCCEEEccCccccccCCC
Q 004637 257 QSFL------------------------------FSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPS 306 (740)
Q Consensus 257 p~~~------------------------------~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 306 (740)
|..+ ...++|+.|+|++|...+.+|.+++++++|+.|++++|...+.+|.
T Consensus 741 P~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~ 820 (1153)
T PLN03210 741 PSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPT 820 (1153)
T ss_pred cccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCC
Confidence 5432 1124677777777777677888888888888888887754456776
Q ss_pred CcCCCCCCceeecCCCC
Q 004637 307 CIGSNSLNRTVVSTWNC 323 (740)
Q Consensus 307 ~~~~~~~l~~l~l~~N~ 323 (740)
.+ .+++|+.|++++|.
T Consensus 821 ~~-~L~sL~~L~Ls~c~ 836 (1153)
T PLN03210 821 GI-NLESLESLDLSGCS 836 (1153)
T ss_pred CC-CccccCEEECCCCC
Confidence 65 56677777777654
|
syringae 6; Provisional |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-17 Score=163.47 Aligned_cols=143 Identities=16% Similarity=0.148 Sum_probs=110.5
Q ss_pred HHHHHhcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeeccccc----------------------ChhHHHHHHHHHh
Q 004637 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH----------------------LPQSLMQHVELLS 502 (740)
Q Consensus 445 ~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~----------------------~~~~~~~Ei~il~ 502 (740)
++......|.+.+.||+|+||.||+|...+|+.||||+++..... ....+.+|..++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 344433347788999999999999999888999999987643210 0123677899999
Q ss_pred hccCcc--cceeeceeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 004637 503 KLRHRH--LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAP 580 (740)
Q Consensus 503 ~l~H~n--Iv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 580 (740)
++.|++ +.+.++. ...++||||+++++|.+.... .....++.++++++.++|+ .
T Consensus 89 ~l~~~~i~v~~~~~~------------~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~---~ 144 (198)
T cd05144 89 ALYEEGFPVPKPIDW------------NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYK---H 144 (198)
T ss_pred HHHHcCCCCCceeec------------CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHH---C
Confidence 998874 3433321 225899999999998776420 2345788999999999999 7
Q ss_pred CceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 581 GIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 581 ~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
+|+||||||+||++++++.++|+|||++...
T Consensus 145 gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 145 GIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred CCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 9999999999999999999999999998543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-19 Score=200.08 Aligned_cols=221 Identities=26% Similarity=0.255 Sum_probs=191.6
Q ss_pred cccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEEEcccCcCccccCcccCCCCCCCeeec
Q 004637 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (740)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 179 (740)
.+++.|+.++|.+....+ -..-.+|+++++++|+++ .+|++++.+.+|+.|+.++|+|+ .+|..+...++|+.|..
T Consensus 219 ~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~ 294 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSA 294 (1081)
T ss_pred cchheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHh
Confidence 567788888888873332 223468999999999995 57799999999999999999997 99999999999999999
Q ss_pred cCccCcccCCCCCCCCCCCEEECCCCCCCCCCcCC----------------------------CCCCcEEEcccCcCccc
Q 004637 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL----------------------------SKNIVSVILRNNSLRSE 231 (740)
Q Consensus 180 ~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~----------------------------~~~L~~L~l~~N~l~~~ 231 (740)
..|.+.-.+|....++.|+.|||..|+|...++.. ...|+.|++.+|.|+..
T Consensus 295 ~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~ 374 (1081)
T KOG0618|consen 295 AYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDS 374 (1081)
T ss_pred hhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCccccc
Confidence 99999999999999999999999999995433311 12467789999999977
Q ss_pred CCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCccccCCCCCCEEEccCccccccCCCCcCCC
Q 004637 232 IPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSN 311 (740)
Q Consensus 232 ~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~ 311 (740)
.-..|.+..+|+.|+|++|+|...+...+.++..|+.|+||+|+|+ .+|+.+.++..|++|...+|+|. ..| .+..+
T Consensus 375 c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l 451 (1081)
T KOG0618|consen 375 CFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQL 451 (1081)
T ss_pred chhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhc
Confidence 7777889999999999999999666667889999999999999998 68999999999999999999998 577 78999
Q ss_pred CCCceeecCCCCCCCC
Q 004637 312 SLNRTVVSTWNCLSGV 327 (740)
Q Consensus 312 ~~l~~l~l~~N~l~~~ 327 (740)
+.|+.+|++.|+|+-.
T Consensus 452 ~qL~~lDlS~N~L~~~ 467 (1081)
T KOG0618|consen 452 PQLKVLDLSCNNLSEV 467 (1081)
T ss_pred CcceEEecccchhhhh
Confidence 9999999999998754
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.6e-18 Score=186.29 Aligned_cols=220 Identities=19% Similarity=0.228 Sum_probs=163.8
Q ss_pred eeecCCCccEEEEE----ecCCCEEEEEEeecccc--cChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCCCCCce
Q 004637 458 LIGEGSQGQLYKGF----LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 458 ~iG~G~fg~Vy~~~----~~~g~~vAvK~l~~~~~--~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~~~~~~ 530 (740)
.+|+|+||.|+.++ ...|..+|+|.+++... ........|..++..++ ||.+|++...+ +.+...
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyaf--------qt~~kl 72 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAF--------QTDGKL 72 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeee--------ccccch
Confidence 36899999999876 23477899998875432 11225567888999997 99999987544 355668
Q ss_pred EEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
+++++|..+|+|...+. ....++......+...++-|++++|. .+|+|||+|++||+++.+|++|+.|||+++.
T Consensus 73 ~l~ld~~rgg~lft~l~---~~~~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske 146 (612)
T KOG0603|consen 73 YLILDFLRGGDLFTRLS---KEVMFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKE 146 (612)
T ss_pred hHhhhhcccchhhhccc---cCCchHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhH
Confidence 99999999999998884 45567777888888999999999999 7999999999999999999999999999864
Q ss_pred C-----CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCcccc
Q 004637 611 S-----KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVR 685 (740)
Q Consensus 611 ~-----~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 685 (740)
. ..|+..|+++|... .....+|.||||++++||+||..||.. +....+.+.....|
T Consensus 147 ~v~~~~~cgt~eymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p------------ 207 (612)
T KOG0603|consen 147 AVKEKIACGTYEYRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMP------------ 207 (612)
T ss_pred hHhhhhcccchhhhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCc------------
Confidence 3 23455566776654 456789999999999999999999986 22222222212222
Q ss_pred CCCcHHHHHHHHHHHHhccccCCCCCCCH
Q 004637 686 GTYAYDSLRTTVEITINCLSKDAAKRPSI 714 (740)
Q Consensus 686 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~ 714 (740)
.+......+++..+...+|..|--.
T Consensus 208 ----~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 208 ----RELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred ----hhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 1122233366667777777777533
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.5e-17 Score=184.75 Aligned_cols=113 Identities=26% Similarity=0.363 Sum_probs=69.1
Q ss_pred CCCHhHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCcccEEeCCCCEEEEEeCCCCCCCCCCCCCcCCCcccccccc
Q 004637 28 QLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSL 107 (740)
Q Consensus 28 ~~~~~~~~~l~~~k~~~~~~~~l~~W~~~~~~C~~~~~~~~~v~C~~~~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l 107 (740)
...+.|..||+++|..+.++.. .+|+ .|+|.....+|.||.|..... .
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~-~~W~--g~~C~p~~~~w~Gv~C~~~~~---------~-------------------- 415 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLR-FGWN--GDPCVPQQHPWSGADCQFDST---------K-------------------- 415 (623)
T ss_pred ccCchHHHHHHHHHHhcCCccc-CCCC--CCCCCCcccccccceeeccCC---------C--------------------
Confidence 3456799999999999876542 4896 367742222456799952110 0
Q ss_pred cCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEEEcccCcCccccCcccCCCCCCCeeeccCccCcc
Q 004637 108 SANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNG 186 (740)
Q Consensus 108 ~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~ 186 (740)
....++.|+|++|.+.|.+|..|+.|++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+|+|
T Consensus 416 --------------~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg 480 (623)
T PLN03150 416 --------------GKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNG 480 (623)
T ss_pred --------------CceEEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCC
Confidence 00123455666666666677667777777777777766666666666665555555555555543
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.9e-17 Score=161.78 Aligned_cols=134 Identities=19% Similarity=0.268 Sum_probs=109.2
Q ss_pred CeeecCCCccEEEEEecCCCEEEEEEeecccccC--------hhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL--------PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--------~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
+.||+|++|.||+|.. +|..|++|+........ ...+.+|++++..++|++|.....++.. ..
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--------~~ 72 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD--------PE 72 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe--------CC
Confidence 5799999999999987 67789999865432211 2357789999999999998776666542 23
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..++||||++|++|.+++.. . .+ .+..++.+++.+|.++|+ .+++|||++|+||+++ ++.++++|||.+
T Consensus 73 ~~~lv~e~~~G~~L~~~~~~---~---~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a 141 (211)
T PRK14879 73 NFIIVMEYIEGEPLKDLINS---N---GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLA 141 (211)
T ss_pred CCEEEEEEeCCcCHHHHHHh---c---cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcc
Confidence 46899999999999999853 1 12 788999999999999999 7999999999999999 789999999987
Q ss_pred CC
Q 004637 609 LP 610 (740)
Q Consensus 609 ~~ 610 (740)
..
T Consensus 142 ~~ 143 (211)
T PRK14879 142 EF 143 (211)
T ss_pred cC
Confidence 53
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.7e-18 Score=170.26 Aligned_cols=233 Identities=17% Similarity=0.200 Sum_probs=138.7
Q ss_pred CCCeeecCCCccEEEEEec-CCCEEEEEEeecccc---cChhHHHHHHHHHhhccC----------cccceeeceeeeec
Q 004637 455 PTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRH----------RHLVSILGHCILTY 520 (740)
Q Consensus 455 ~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~il~~l~H----------~nIv~l~g~~~~~~ 520 (740)
..+.||.|+++.||.++.. +|+.+|||+...... ...+++++|.-....+.+ -.++.-++......
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 3578999999999999965 589999999875432 223566666654444322 11221112111110
Q ss_pred cCC-CC---CCC-----ceEEEEecccCcchhhhccc---c-cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCC
Q 004637 521 QDH-PN---TGS-----TVFLVLEHISNGSLRDYLTD---W-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL 587 (740)
Q Consensus 521 ~~~-~~---~~~-----~~~lV~Ey~~~gsL~~~l~~---~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl 587 (740)
... .+ ... ..+++|+-+. +||.+++.. . .....+....++.+..|+++.+++||+ .|++|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEEST-
T ss_pred CCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceEeccc
Confidence 000 00 001 2478888885 599888642 1 111234455677888999999999999 79999999
Q ss_pred CCCceeecCCCceeEecCCCCCCCCC-----CCCCccccccccC--------CCCCCCccceehhhHHHHHHHhCCCCCC
Q 004637 588 KTENILLDKALTAKLSGYNIPLPSKK-----GLESPLRGQYVSN--------QPGDGAKEDVYQLGVILLQVITGKQVKS 654 (740)
Q Consensus 588 Kp~NILld~~~~~kl~DFGla~~~~~-----~~~~~~~~~~~~~--------~~~~~~ksDVwSfGvil~ElltG~~p~~ 654 (740)
||+|++++.+|.++|+||+....... .......|++... .-.++.+.|.|++|+++|.|.+|+.||.
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~ 251 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG 251 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence 99999999999999999986532211 1112223332221 1235778899999999999999999998
Q ss_pred CCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCC
Q 004637 655 TSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKR 711 (740)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~R 711 (740)
.........+ .-..+. +.++.+..||..+++++|++|
T Consensus 252 ~~~~~~~~~~-------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 252 LSSPEADPEW-------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CCGGGSTSGG-------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCccccccc-------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 5433221111 012233 556777899999999999988
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.6e-17 Score=163.57 Aligned_cols=196 Identities=20% Similarity=0.264 Sum_probs=133.9
Q ss_pred cCcccceeeceeeeeccC-------------------CCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHH
Q 004637 505 RHRHLVSILGHCILTYQD-------------------HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565 (740)
Q Consensus 505 ~H~nIv~l~g~~~~~~~~-------------------~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 565 (740)
+|||||++.++|.+.-.- ....+..+|+||.-.+. +|++|+-. ...+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~----~~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT----RHRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc----CCCchHHHHHHHH
Confidence 599999999988654221 11245678999999876 99999943 2345566777889
Q ss_pred HHHHHHHHHHcCCCCCceecCCCCCceee--cCCC--ceeEecCCCCCCCCC---------------CCCCccccccccC
Q 004637 566 GATRGVQFLHTGVAPGIFGNNLKTENILL--DKAL--TAKLSGYNIPLPSKK---------------GLESPLRGQYVSN 626 (740)
Q Consensus 566 ~ia~gL~yLH~~~~~~iiHrDlKp~NILl--d~~~--~~kl~DFGla~~~~~---------------~~~~~~~~~~~~~ 626 (740)
|+++|+.|||. ++|.|||+|++|||+ |+|+ ...|+|||++...+. |-...++||....
T Consensus 349 QlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 99999999999 799999999999998 4444 468899998632211 1222345555443
Q ss_pred CCCC-----CCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHH
Q 004637 627 QPGD-----GAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITI 701 (740)
Q Consensus 627 ~~~~-----~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~ 701 (740)
.|.. -.|+|.|+.|.+.||+++...||+......+... ......-..+.+.+. ..+.+++.
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r--~Yqe~qLPalp~~vp------------p~~rqlV~ 491 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR--TYQESQLPALPSRVP------------PVARQLVF 491 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh--hhhhhhCCCCcccCC------------hHHHHHHH
Confidence 3321 2589999999999999999999987443222111 111111011222222 23448889
Q ss_pred hccccCCCCCCCHHHHHHHhh
Q 004637 702 NCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 702 ~cl~~dP~~RPs~~evl~~L~ 722 (740)
..++.||++|++..-....|+
T Consensus 492 ~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 492 DLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHhcCCccccCCccHHHhHHH
Confidence 999999999999877666554
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-16 Score=157.78 Aligned_cols=130 Identities=22% Similarity=0.247 Sum_probs=102.6
Q ss_pred eeecCCCccEEEEEecCCCEEEEEEeeccccc--------ChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCc
Q 004637 458 LIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 458 ~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--------~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 529 (740)
.||+|+||.||+|.. ++..|++|........ ...++.+|+++++.++|+++.....++.. ...
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--------~~~ 71 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD--------PDN 71 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE--------CCC
Confidence 489999999999985 5788999986533211 12457789999999998876554444431 223
Q ss_pred eEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
.++||||++|++|.+++.. ... .++.+++++|.++|+ .+++|||+||+||+++ ++.+++.|||.+.
T Consensus 72 ~~lv~e~~~g~~l~~~~~~---~~~-------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 72 KTIVMEYIEGKPLKDVIEE---GND-------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred CEEEEEEECCccHHHHHhh---cHH-------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence 6899999999999988743 110 789999999999999 7999999999999999 8999999999875
Q ss_pred C
Q 004637 610 P 610 (740)
Q Consensus 610 ~ 610 (740)
.
T Consensus 138 ~ 138 (199)
T TIGR03724 138 Y 138 (199)
T ss_pred C
Confidence 4
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-16 Score=181.22 Aligned_cols=137 Identities=20% Similarity=0.210 Sum_probs=107.8
Q ss_pred hcCCCCCCeeecCCCccEEEEEecCCCEEEEEEe-ecc-cc------cChhHHHHHHHHHhhccCcccceeeceeeeecc
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCL-KLK-QR------HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l-~~~-~~------~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~ 521 (740)
...|...+.||+|+||+||+|.+.+.. +++|+. ... .. ...+.+.+|++++++++|++++....++..
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--- 407 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD--- 407 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe---
Confidence 344567899999999999999875544 444432 211 11 112468899999999999999887766542
Q ss_pred CCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCcee
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (740)
Q Consensus 522 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~k 601 (740)
....++||||+++++|.+++. ....++.+++++|.|||+ .+|+|||+||+|||+ +++.++
T Consensus 408 -----~~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~ 467 (535)
T PRK09605 408 -----PEEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLY 467 (535)
T ss_pred -----CCCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEE
Confidence 233689999999999999873 356789999999999999 799999999999999 678999
Q ss_pred EecCCCCCC
Q 004637 602 LSGYNIPLP 610 (740)
Q Consensus 602 l~DFGla~~ 610 (740)
|+|||+++.
T Consensus 468 liDFGla~~ 476 (535)
T PRK09605 468 LIDFGLGKY 476 (535)
T ss_pred EEeCccccc
Confidence 999999854
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.8e-19 Score=177.11 Aligned_cols=256 Identities=18% Similarity=0.112 Sum_probs=196.3
Q ss_pred cEEeCCCCEEEEEeCCCCCCCCCCCCCcCCCcccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCC
Q 004637 69 KIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFW 148 (740)
Q Consensus 69 ~v~C~~~~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 148 (740)
+.+|++..-..++-++.+++...... .....+++|..|.|....|.+|+.+++|+.|||++|+|+-.-|++|..|.
T Consensus 40 pC~Cs~~~g~~VdCr~~GL~eVP~~L----P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~ 115 (498)
T KOG4237|consen 40 PCTCSDVEGGIVDCRGKGLTEVPANL----PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLA 115 (498)
T ss_pred CcccCCCCCceEEccCCCcccCcccC----CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhH
Confidence 48887644455677777775433222 24778899999999999999999999999999999999999999999999
Q ss_pred CCCEEEccc-CcCccccCcc-cCCCCCCCeeeccCccCcccCCC-CCCCCCCCEEECCCCCCCCCCcCC---CCCCcEEE
Q 004637 149 SLEVLNISS-NFIYGEIPME-ITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVI 222 (740)
Q Consensus 149 ~L~~L~Ls~-N~l~g~~p~~-~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~ 222 (740)
+|..|-+-+ |+|+ .+|.. |++|..|+.|.+.-|++.-...+ |..|++|..|.|..|.+....-.. +..++.+.
T Consensus 116 ~l~~Lvlyg~NkI~-~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlh 194 (498)
T KOG4237|consen 116 SLLSLVLYGNNKIT-DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLH 194 (498)
T ss_pred hhhHHHhhcCCchh-hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHh
Confidence 988876666 9999 77765 89999999999999999988775 999999999999999985333222 34566666
Q ss_pred cccCcC------------cccCCccccCCCCCcEEEccC-------------------------Cccccccc-hhhccCC
Q 004637 223 LRNNSL------------RSEIPSGLKNFDQLKQFDISS-------------------------NNFVGPIQ-SFLFSLP 264 (740)
Q Consensus 223 l~~N~l------------~~~~p~~~~~l~~L~~L~l~~-------------------------N~l~g~~p-~~~~~l~ 264 (740)
+..|.+ -...|.+++......-..+.+ ....+.-| ..|..|+
T Consensus 195 lA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~ 274 (498)
T KOG4237|consen 195 LAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLP 274 (498)
T ss_pred hhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcc
Confidence 666652 112233333222221111111 11222333 3578899
Q ss_pred CccEEecccccccccCCccccCCCCCCEEEccCccccccCCCCcCCCCCCceeecCCCCCCCCCC
Q 004637 265 SILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (740)
Q Consensus 265 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (740)
+|+.|+|++|++++.-+.+|..+..++.|.|..|+|...-...|.+++.|++|+|.+|+++...|
T Consensus 275 ~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~ 339 (498)
T KOG4237|consen 275 NLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAP 339 (498)
T ss_pred cceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEec
Confidence 99999999999999999999999999999999999997767778899999999999999987655
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.4e-18 Score=183.50 Aligned_cols=225 Identities=22% Similarity=0.202 Sum_probs=108.6
Q ss_pred cccccccCCcCCC----hhhhhhcCCCCCcEeecccccCcc------CCCccccCCCCCCEEEcccCcCccccCcccCCC
Q 004637 102 ASQQSLSANFNID----RFFTILTKLSNLKVLSLVSLGLWG------PLPSKINRFWSLEVLNISSNFIYGEIPMEITSL 171 (740)
Q Consensus 102 l~~l~l~~n~~~~----~~~~~~~~l~~L~~L~L~~n~l~~------~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 171 (740)
+..++++++.+.. .++..+...++|+.|+++.|.+.+ .++..+..+++|+.|+|++|.+.+..+..+..+
T Consensus 25 L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l 104 (319)
T cd00116 25 LQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESL 104 (319)
T ss_pred ccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHH
Confidence 4444444444422 133444455555555555555531 123344555556666666655554444444333
Q ss_pred CC---CCeeeccCccCcccC-----CCCCCC-CCCCEEECCCCCCCCCCcC-------CCCCCcEEEcccCcCcc----c
Q 004637 172 KN---LKSIVLADNLLNGSV-----PDLQRL-VLLEELNLGGNDFGPKFPS-------LSKNIVSVILRNNSLRS----E 231 (740)
Q Consensus 172 ~~---L~~L~L~~N~l~~~~-----~~~~~l-~~L~~L~L~~N~l~~~~p~-------~~~~L~~L~l~~N~l~~----~ 231 (740)
.+ |+.|++++|++++.. ..+..+ ++|+.|+|++|.+++.... ...+|+.|+|++|.+++ .
T Consensus 105 ~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 184 (319)
T cd00116 105 LRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRA 184 (319)
T ss_pred hccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHH
Confidence 33 666666665555211 123344 5556666666655532111 12355566666665552 1
Q ss_pred CCccccCCCCCcEEEccCCccccc----cchhhccCCCccEEecccccccccCCcccc-----CCCCCCEEEccCcccc-
Q 004637 232 IPSGLKNFDQLKQFDISSNNFVGP----IQSFLFSLPSILYLNLAGNQLSEALPVNIS-----CSAKLNFVEISHNLLI- 301 (740)
Q Consensus 232 ~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~l~~L~~l~ls~N~l~- 301 (740)
++..+..+++|+.|+|++|.+++. ++..+..+++|++|++++|.+++.....+. ...+|+.|++++|.++
T Consensus 185 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~ 264 (319)
T cd00116 185 LAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITD 264 (319)
T ss_pred HHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCc
Confidence 223344445666666666665432 223334455566666666665542221111 1245666666666654
Q ss_pred ---ccCCCCcCCCCCCceeecCCCCCCC
Q 004637 302 ---GKLPSCIGSNSLNRTVVSTWNCLSG 326 (740)
Q Consensus 302 ---~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (740)
..+...+..++.|+.+++++|.++.
T Consensus 265 ~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 265 DGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred HHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 1222333344556666666666553
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.4e-18 Score=183.37 Aligned_cols=249 Identities=21% Similarity=0.202 Sum_probs=182.6
Q ss_pred CEEEEEeCCCCCCCCCC---CCCcCCCcccccccccCCcCC------ChhhhhhcCCCCCcEeecccccCccCCCccccC
Q 004637 76 RVTELTVIGNKSSPAHS---PKPTFGKFSASQQSLSANFNI------DRFFTILTKLSNLKVLSLVSLGLWGPLPSKINR 146 (740)
Q Consensus 76 ~v~~l~l~~~~l~~~~~---~~~~~~~~~l~~l~l~~n~~~------~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 146 (740)
.++.|+++++.++..-. +........+.+++++++.+. ..++..+..+++|+.|+|++|.+.+..+..+..
T Consensus 24 ~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~ 103 (319)
T cd00116 24 CLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLES 103 (319)
T ss_pred hccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHH
Confidence 37788888887632100 000112235778888888776 345667888999999999999998777777777
Q ss_pred CCC---CCEEEcccCcCcc----ccCcccCCC-CCCCeeeccCccCcccCC-----CCCCCCCCCEEECCCCCCCCC---
Q 004637 147 FWS---LEVLNISSNFIYG----EIPMEITSL-KNLKSIVLADNLLNGSVP-----DLQRLVLLEELNLGGNDFGPK--- 210 (740)
Q Consensus 147 l~~---L~~L~Ls~N~l~g----~~p~~~~~l-~~L~~L~L~~N~l~~~~~-----~~~~l~~L~~L~L~~N~l~~~--- 210 (740)
+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.+++... .+..+++|+.|+|++|.+++.
T Consensus 104 l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 183 (319)
T cd00116 104 LLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIR 183 (319)
T ss_pred HhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHH
Confidence 666 9999999999983 344456677 899999999999995321 367788999999999999852
Q ss_pred -CcCC---CCCCcEEEcccCcCccc----CCccccCCCCCcEEEccCCccccccchhhcc-----CCCccEEeccccccc
Q 004637 211 -FPSL---SKNIVSVILRNNSLRSE----IPSGLKNFDQLKQFDISSNNFVGPIQSFLFS-----LPSILYLNLAGNQLS 277 (740)
Q Consensus 211 -~p~~---~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~-----l~~L~~L~l~~N~l~ 277 (740)
++.. ..+|+.|+|++|.+++. ++..+..+++|++|++++|.+++.....+.. .+.|+.|++++|.++
T Consensus 184 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 184 ALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCC
Confidence 2222 25999999999999743 3445678899999999999998643333332 379999999999997
Q ss_pred c----cCCccccCCCCCCEEEccCcccccc----CCCCcCCC-CCCceeecCCCCC
Q 004637 278 E----ALPVNISCSAKLNFVEISHNLLIGK----LPSCIGSN-SLNRTVVSTWNCL 324 (740)
Q Consensus 278 ~----~~p~~~~~l~~L~~l~ls~N~l~~~----~p~~~~~~-~~l~~l~l~~N~l 324 (740)
. .+...+..+++|+++++++|.++.. +...+... +.++.+++.+|.+
T Consensus 264 ~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 264 DDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred cHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 2 3445566778999999999999854 33333333 5677787777653
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.5e-16 Score=181.26 Aligned_cols=244 Identities=18% Similarity=0.214 Sum_probs=162.8
Q ss_pred HHHHHhcCCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhcc---Ccccceeeceeeeecc
Q 004637 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR---HRHLVSILGHCILTYQ 521 (740)
Q Consensus 445 ~l~~~~~~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~---H~nIv~l~g~~~~~~~ 521 (740)
+.+...+.|.+.+.||+|+||+||+|...+|+.||+|+=+..... +|.--.+++.||+ -+-|..+...+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~---- 764 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHV---- 764 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHc----
Confidence 444556778899999999999999999878999999987644321 1222234555555 123333333222
Q ss_pred CCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeec------
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD------ 595 (740)
Q Consensus 522 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld------ 595 (740)
-.+.-++|+||.+.|+|.+++. ..+..+|...+.++.|+++-++.||. .+|||+||||+|.||.
T Consensus 765 ----~~~~S~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~ 834 (974)
T KOG1166|consen 765 ----FQNASVLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICAD 834 (974)
T ss_pred ----cCCcceeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCC
Confidence 1233689999999999999996 45678999999999999999999999 7999999999999994
Q ss_pred -CCCceeEecCCCCCC---CCCCCC--------CccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHH
Q 004637 596 -KALTAKLSGYNIPLP---SKKGLE--------SPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKL 663 (740)
Q Consensus 596 -~~~~~kl~DFGla~~---~~~~~~--------~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~ 663 (740)
+...++|+|||.+.. ...++. ..-+.| +..+..+++.+|-|.+.-+++-|+.|+.--
T Consensus 835 ~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~E-M~~grpWtYq~DyfGlAa~~h~mLFG~y~q---------- 903 (974)
T KOG1166|consen 835 SDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIE-MREGRPWTYQIDYFGLAATVHVMLFGKYME---------- 903 (974)
T ss_pred CcccceEEEecccceeeeEcCCCcEEeeeeccccchhHH-HhcCCCCchhhhhHHHHHHHHHHHHHHHHH----------
Confidence 234689999999832 222211 111223 344667889999999999999999996311
Q ss_pred HHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhhhhc
Q 004637 664 QLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQV 727 (740)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 727 (740)
.... ....++..++.-+..+...++++++ |..|-..=|...++...++.+...
T Consensus 904 ----~~~g----~~~~~~~~~~Ry~~~~~W~~~F~~l---LN~~~~~~p~l~~lr~~~~~~~~~ 956 (974)
T KOG1166|consen 904 ----VKNG----SSWMVKTNFPRYWKRDMWNKFFDLL---LNPDCDTLPNLQELRTELEEVLAE 956 (974)
T ss_pred ----hcCC----cceeccccchhhhhHHHHHHHHHHH---hCcCcccchhHHHHHHHHHHHHHH
Confidence 0000 1111122222222334444444444 445555557777777777766543
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-15 Score=147.91 Aligned_cols=136 Identities=18% Similarity=0.213 Sum_probs=96.5
Q ss_pred CCeeecCCCccEEEEEecCCCEEEEEEeecccccC--hhH----------------------HHHHHHHHhhccCcc--c
Q 004637 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL--PQS----------------------LMQHVELLSKLRHRH--L 509 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--~~~----------------------~~~Ei~il~~l~H~n--I 509 (740)
.+.||+|+||+||+|+..+++.||||+++...... ... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998789999999987532111 011 134555666664432 3
Q ss_pred ceeeceeeeeccCCCCCCCceEEEEecccCcchhhh-cccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCC
Q 004637 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDY-LTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588 (740)
Q Consensus 510 v~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlK 588 (740)
.+.+++ ...++||||++++++... +.+.. .. .....++.+++.++.++|.. .+|+|||||
T Consensus 82 ~~~~~~------------~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~ 142 (187)
T cd05119 82 PKPIDL------------NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYRE--AGLVHGDLS 142 (187)
T ss_pred CceEec------------CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCC
Confidence 333321 125899999999654322 21100 11 55678999999999999973 599999999
Q ss_pred CCceeecCCCceeEecCCCCCCC
Q 004637 589 TENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 589 p~NILld~~~~~kl~DFGla~~~ 611 (740)
|+||+++ ++.++++|||.+...
T Consensus 143 p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 143 EYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred hhhEEEE-CCcEEEEECcccccc
Confidence 9999999 899999999998543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.7e-15 Score=138.06 Aligned_cols=134 Identities=16% Similarity=0.150 Sum_probs=110.2
Q ss_pred CCCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccC--cccceeeceeeeeccCCCCCCCceEE
Q 004637 455 PTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH--RHLVSILGHCILTYQDHPNTGSTVFL 532 (740)
Q Consensus 455 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H--~nIv~l~g~~~~~~~~~~~~~~~~~l 532 (740)
+.+.||+|.++.||+++..+ ..+++|....... ...+.+|+.+++.++| .++++++++.. .++..++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~--------~~~~~~~ 70 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGE--------SDGWSYL 70 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcC--------CCCccEE
Confidence 35789999999999999754 7899998865433 4678999999999987 48888876553 2255899
Q ss_pred EEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 533 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
+|||++++.+..+ +......++.+++++++++|.....+++|+|+||+||++++.+.+++.|||.+.
T Consensus 71 v~e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~ 137 (155)
T cd05120 71 LMEWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAG 137 (155)
T ss_pred EEEecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence 9999998777543 456677889999999999998544579999999999999999999999999874
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-15 Score=171.28 Aligned_cols=198 Identities=22% Similarity=0.319 Sum_probs=139.1
Q ss_pred hcCCCCCCeeecCCCccEEEEEec-CCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 450 ~~~f~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
..+|+.++.|..|+||.||.++.+ ..+.+|+|+=+ +. - |+ +||..+-|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~-----l------il-----Rnilt~a~-------------- 130 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN-----L------IL-----RNILTFAG-------------- 130 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-cc-----h------hh-----hccccccC--------------
Confidence 367888999999999999999865 46788885422 11 1 11 12333322
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
..+.| ||-.+.++ ..+.++... +.+++|+|+ .+|+|||+||+|.+|+.-|++|+.|||++
T Consensus 131 npfvv------gDc~tllk---~~g~lPvdm--------vla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 131 NPFVV------GDCATLLK---NIGPLPVDM--------VLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLS 190 (1205)
T ss_pred Cccee------chhhhhcc---cCCCCcchh--------hHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhh
Confidence 12333 45555553 233343322 678999999 89999999999999999999999999986
Q ss_pred CCC------------------------CCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHH
Q 004637 609 LPS------------------------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQ 664 (740)
Q Consensus 609 ~~~------------------------~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~ 664 (740)
+.. ..++..|.++++.. ..+|+..+|+|++|+|+||.+-|+.||.++..+++...
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVil-rqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~ 269 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVIL-RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQ 269 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhh-hhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhh
Confidence 321 12344555666655 46789999999999999999999999999888887776
Q ss_pred HHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCC
Q 004637 665 LETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP 712 (740)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP 712 (740)
+.......++. |+.+ ..++.+++.+.++.+|..|-
T Consensus 270 visd~i~wpE~-----dea~--------p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 270 VISDDIEWPEE-----DEAL--------PPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhhhhcccccc-----CcCC--------CHHHHHHHHHHHHhChHhhc
Confidence 65554444332 2211 23455899999999999995
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.8e-14 Score=145.85 Aligned_cols=139 Identities=15% Similarity=0.145 Sum_probs=105.4
Q ss_pred CCeee-cCCCccEEEEEecCCCEEEEEEeeccc-------------ccChhHHHHHHHHHhhccCccc--ceeeceeeee
Q 004637 456 TNLIG-EGSQGQLYKGFLTDGSRVSVKCLKLKQ-------------RHLPQSLMQHVELLSKLRHRHL--VSILGHCILT 519 (740)
Q Consensus 456 ~~~iG-~G~fg~Vy~~~~~~g~~vAvK~l~~~~-------------~~~~~~~~~Ei~il~~l~H~nI--v~l~g~~~~~ 519 (740)
...|| .|+.|+||++... +..++||.+.... ......+.+|++++.+++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999875 6789999885321 1123467889999999998885 6677664321
Q ss_pred ccCCCCCCCceEEEEecccC-cchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC
Q 004637 520 YQDHPNTGSTVFLVLEHISN-GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (740)
Q Consensus 520 ~~~~~~~~~~~~lV~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~ 598 (740)
.. .....++||||+++ .+|.+++.+ ..++.. .+.+++.++.+||+ .||+||||||+|||++.++
T Consensus 115 ~~----~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 115 HG----LFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDG 179 (239)
T ss_pred cC----cceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCC
Confidence 11 11223699999997 689888843 234433 35689999999999 7999999999999999999
Q ss_pred ceeEecCCCCCC
Q 004637 599 TAKLSGYNIPLP 610 (740)
Q Consensus 599 ~~kl~DFGla~~ 610 (740)
.++|+|||.+..
T Consensus 180 ~v~LIDfg~~~~ 191 (239)
T PRK01723 180 KFWLIDFDRGEL 191 (239)
T ss_pred CEEEEECCCccc
Confidence 999999998754
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-16 Score=165.69 Aligned_cols=172 Identities=24% Similarity=0.364 Sum_probs=105.9
Q ss_pred ccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEEEcccCcCccccCcccCCCCCCCeeecc
Q 004637 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (740)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 180 (740)
.....||+.|.+ ..+|.++..+..|+.|.|..|.+ ..+|..+.+|..|++|||+.|+++ .+|..++.|+ |+.|-++
T Consensus 76 dt~~aDlsrNR~-~elp~~~~~f~~Le~liLy~n~~-r~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRF-SELPEEACAFVSLESLILYHNCI-RTIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVS 151 (722)
T ss_pred chhhhhcccccc-ccCchHHHHHHHHHHHHHHhccc-eecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEe
Confidence 444566666666 34556666666677777777776 566667777777777777777776 6676666554 6777777
Q ss_pred CccCcccCCCCCCCCCCCEEECCCCCCCCCCcCCCCCCcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccchhh
Q 004637 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFL 260 (740)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~ 260 (740)
+|+++..+++++.+..|..||.+.|++. .+|..++.+.+|+.|.+..|++. .+|..+
T Consensus 152 NNkl~~lp~~ig~~~tl~~ld~s~nei~----------------------slpsql~~l~slr~l~vrRn~l~-~lp~El 208 (722)
T KOG0532|consen 152 NNKLTSLPEEIGLLPTLAHLDVSKNEIQ----------------------SLPSQLGYLTSLRDLNVRRNHLE-DLPEEL 208 (722)
T ss_pred cCccccCCcccccchhHHHhhhhhhhhh----------------------hchHHhhhHHHHHHHHHhhhhhh-hCCHHH
Confidence 7777766666666666666666666663 44555555555555555555555 344444
Q ss_pred ccCCCccEEecccccccccCCccccCCCCCCEEEccCcccc
Q 004637 261 FSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLI 301 (740)
Q Consensus 261 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 301 (740)
+.|+ |..||++.|+++ .+|..|.+|+.|++|.|.+|.|.
T Consensus 209 ~~Lp-Li~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 209 CSLP-LIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred hCCc-eeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 4333 455555555554 35555555555555555555555
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.52 E-value=5e-15 Score=156.73 Aligned_cols=238 Identities=14% Similarity=0.177 Sum_probs=145.7
Q ss_pred CCCeeecCCCccEEEEEecC----CCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeec---eeee-eccCCCCC
Q 004637 455 PTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILG---HCIL-TYQDHPNT 526 (740)
Q Consensus 455 ~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g---~~~~-~~~~~~~~ 526 (740)
+.+..+..+++.++...... ...++.|..+...........+++-.+....|-+..-+.. +-.. ........
T Consensus 248 ~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~ 327 (516)
T KOG1033|consen 248 ISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGK 327 (516)
T ss_pred ccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccccccc
Confidence 34556666677666655322 2334444443333122233344444444443333332222 0000 00000011
Q ss_pred CCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCC
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFG 606 (740)
..+.|+.|++|...+|.+||...+.....++.....++.|++.|+.| ++.+|||+||.||+...+..+||.|||
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhh
Confidence 23589999999999999999765666678889999999999999999 389999999999999999999999999
Q ss_pred CCCCCC---------------CCCCCccccccccCCCCCCCccceehhhHHHHHHHh-CCCCCCCCccchhHHHHHHhhh
Q 004637 607 IPLPSK---------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 607 la~~~~---------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 670 (740)
+..... .++..|+.||.+. ...|+.|+||||+|++++|+++ =..++.. ......
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~-g~~y~~kvdIyaLGlil~EL~~~f~T~~er------~~t~~d--- 471 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIR-GQQYSEKVDIYALGLILAELLIQFSTQFER------IATLTD--- 471 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHh-hhhhhhhcchhhHHHHHHHHHHHhccHHHH------HHhhhh---
Confidence 863221 2333455566554 4578999999999999999997 2221110 000000
Q ss_pred cCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHH
Q 004637 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDV 717 (740)
Q Consensus 671 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ev 717 (740)
.....++|....+++. -..++.+++...|.+||++.++
T Consensus 472 ----~r~g~ip~~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 472 ----IRDGIIPPEFLQDYPE-----EYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred ----hhcCCCChHHhhcCcH-----HHHHHHHhcCCCcccCchHHHH
Confidence 0111222222233332 2378899999999999955444
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1e-15 Score=161.78 Aligned_cols=175 Identities=23% Similarity=0.257 Sum_probs=142.3
Q ss_pred CCCCCEEEcccCcCccccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCCEEECCCCCCCCCCcCCC-CCCcEEEccc
Q 004637 147 FWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS-KNIVSVILRN 225 (740)
Q Consensus 147 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~L~~L~l~~ 225 (740)
|.--...||+.|++. ++|.++..+..|+.|.|..|.+..+++.+.++..|++|||+.|+++-..+..+ --|+.|.+++
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS~lp~~lC~lpLkvli~sN 152 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQLSHLPDGLCDLPLKVLIVSN 152 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccchhhcCChhhhcCcceeEEEec
Confidence 444455677777776 67777766677777777777777666667777777777777777765555443 4678888889
Q ss_pred CcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCccccCCCCCCEEEccCccccccCC
Q 004637 226 NSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLP 305 (740)
Q Consensus 226 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 305 (740)
|+++ .+|..++.+..|..||.+.|++. .+|..++.+.+|+.|++..|++. .+|..+.. -.|..||+|+|+++ .+|
T Consensus 153 Nkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfScNkis-~iP 227 (722)
T KOG0532|consen 153 NKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSCNKIS-YLP 227 (722)
T ss_pred Cccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-CceeeeecccCcee-ecc
Confidence 9987 78999999999999999999999 67888999999999999999998 57877874 46999999999999 799
Q ss_pred CCcCCCCCCceeecCCCCCCCC
Q 004637 306 SCIGSNSLNRTVVSTWNCLSGV 327 (740)
Q Consensus 306 ~~~~~~~~l~~l~l~~N~l~~~ 327 (740)
-+|..+..|++|.|.+|.|...
T Consensus 228 v~fr~m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 228 VDFRKMRHLQVLQLENNPLQSP 249 (722)
T ss_pred hhhhhhhhheeeeeccCCCCCC
Confidence 9999999999999999999874
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.2e-13 Score=148.50 Aligned_cols=144 Identities=22% Similarity=0.163 Sum_probs=99.4
Q ss_pred CCCCCCeeecCCCccEEEEEecCCCEEEEEEeecccccC----------------------------------------h
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL----------------------------------------P 491 (740)
Q Consensus 452 ~f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~----------------------------------------~ 491 (740)
.|+ .+.||.|++|.||+|++.+|+.||||+.+..-... +
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 344 36899999999999999999999999986431000 0
Q ss_pred hHHHHHHHHHhhcc----CcccceeeceeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHH
Q 004637 492 QSLMQHVELLSKLR----HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567 (740)
Q Consensus 492 ~~~~~Ei~il~~l~----H~nIv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i 567 (740)
-+|.+|.+.+.+++ |.+-|.+-.++.. .....++||||++|++|.++..... ... .+..++..+
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-------~~~~~vLvmE~i~G~~L~~~~~~~~--~~~---~~~~ia~~~ 265 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWD-------RTSERVLTMEWIDGIPLSDIAALDE--AGL---DRKALAENL 265 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehh-------hcCCceEEEEeECCcccccHHHHHh--cCC---CHHHHHHHH
Confidence 02445665555552 3333333333321 1223699999999999998764211 112 234566666
Q ss_pred HH-HHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 568 TR-GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 568 a~-gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
++ .+..+|. .+++|+|+||.||+++.++.+++.|||++...
T Consensus 266 ~~~~l~ql~~---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 266 ARSFLNQVLR---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred HHHHHHHHHh---CCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 65 4678887 69999999999999999999999999997544
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-13 Score=152.02 Aligned_cols=181 Identities=29% Similarity=0.387 Sum_probs=100.1
Q ss_pred hcCCCCCcEeecccccCccCCCccccCCC-CCCEEEcccCcCccccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCC
Q 004637 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFW-SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLE 198 (740)
Q Consensus 120 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~ 198 (740)
+..++.++.|++.+|.+ ..+|+....+. +|+.|++++|++. .+|..++.+++|+.|++++|+++..++..+.+++|+
T Consensus 112 ~~~~~~l~~L~l~~n~i-~~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~~~L~ 189 (394)
T COG4886 112 LLELTNLTSLDLDNNNI-TDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLSNLN 189 (394)
T ss_pred hhcccceeEEecCCccc-ccCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhhhhhhhhhhhhhhh
Confidence 34445666666666666 34555555553 6666666666665 555556666666666666666665555555566666
Q ss_pred EEECCCCCCCCCCcC--CCCCCcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccc
Q 004637 199 ELNLGGNDFGPKFPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276 (740)
Q Consensus 199 ~L~L~~N~l~~~~p~--~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 276 (740)
.|++++|+++...+. ....|+.|.+++|++. .++..+.++.++..|.+.+|++. .++..++.+++++.|++++|++
T Consensus 190 ~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i 267 (394)
T COG4886 190 NLDLSGNKISDLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQI 267 (394)
T ss_pred heeccCCccccCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceeccccccc
Confidence 666666666444433 2344555666555432 34445555555555555555555 2244555555555555555555
Q ss_pred cccCCccccCCCCCCEEEccCccccccCCC
Q 004637 277 SEALPVNISCSAKLNFVEISHNLLIGKLPS 306 (740)
Q Consensus 277 ~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 306 (740)
+. ++. ++.+.+|+.|++++|.++..+|.
T Consensus 268 ~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 268 SS-ISS-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred cc-ccc-ccccCccCEEeccCccccccchh
Confidence 53 222 55555555555555555544443
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.7e-13 Score=133.76 Aligned_cols=198 Identities=17% Similarity=0.225 Sum_probs=133.1
Q ss_pred HHHhhccCcccceeeceeeeeccCCCCCCCceEEEEecccCcchhhhccccc-CCCCCCHHHHHHHHHHHHHHHHHHHcC
Q 004637 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTG 577 (740)
Q Consensus 499 ~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~ 577 (740)
.-+-.+.|.|||++..|+.+..+ ++.....++.|||+.|++.++|++.+ ....+......+++-||..||.|||+
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~---~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs- 194 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKY---EEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS- 194 (458)
T ss_pred HHHHHHHHHHHHHHHHhhccccc---ccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-
Confidence 34555679999999998864433 34566899999999999999998643 33456667778999999999999998
Q ss_pred CCCCceecCCCCCceeecCCCceeEecCCCC-------------CCCCCCCCCccccccccCCCCCCCccceehhhHHHH
Q 004637 578 VAPGIFGNNLKTENILLDKALTAKLSGYNIP-------------LPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILL 644 (740)
Q Consensus 578 ~~~~iiHrDlKp~NILld~~~~~kl~DFGla-------------~~~~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ 644 (740)
|.++|+|+++..+-|++..++-+|+.--.-. +....+...+.++++.. ....+.++|||+||+..+
T Consensus 195 ~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~-~tn~~~a~dIy~fgmcAl 273 (458)
T KOG1266|consen 195 CDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGT-TTNTTGASDIYKFGMCAL 273 (458)
T ss_pred cCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCc-ccccccchhhhhhhHHHH
Confidence 6889999999999999999998887532211 01111222233333322 122356899999999999
Q ss_pred HHHhCCCC-CCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHH
Q 004637 645 QVITGKQV-KSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 645 ElltG~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 720 (740)
||..|..- ............+...... .....+ .+++.+|++..|..||+|.+++.+
T Consensus 274 emailEiq~tnseS~~~~ee~ia~~i~~----len~lq---------------r~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 274 EMAILEIQSTNSESKVEVEENIANVIIG----LENGLQ---------------RGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred HHHHheeccCCCcceeehhhhhhhheee----ccCccc---------------cCcCcccccCCCCCCcchhhhhcC
Confidence 99998743 2222221111111111111 111111 156778999999999999998754
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.2e-14 Score=161.19 Aligned_cols=247 Identities=16% Similarity=0.201 Sum_probs=173.1
Q ss_pred cCCCCCCeeecCCCccEEEEEecC--CCEEEEEEeeccc--ccChhHHHHHHHHHhhcc-CcccceeeceeeeeccCCCC
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTD--GSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~iG~G~fg~Vy~~~~~~--g~~vAvK~l~~~~--~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~~~ 525 (740)
..|.+.+.||+|+|+.|-...... ...+|+|.+.... .........|..+-+.+. |+|++++++.. .
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~--------~ 91 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPS--------S 91 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCcc--------C
Confidence 346667779999999998877433 4456777665432 223344556888877886 99999999755 3
Q ss_pred CCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCCCceecCCCCCceeecCCC-ceeEe
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH-TGVAPGIFGNNLKTENILLDKAL-TAKLS 603 (740)
Q Consensus 526 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~iiHrDlKp~NILld~~~-~~kl~ 603 (740)
..+..++++||..+|++.+.+.. ......+......+..|+..|+.|+| . .++.|||+||+|.+++..+ ..|++
T Consensus 92 ~~~~~~~~~~~s~g~~~f~~i~~-~~~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~ 167 (601)
T KOG0590|consen 92 SPRSYLLSLSYSDGGSLFSKISH-PDSTGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIA 167 (601)
T ss_pred CCcccccccCccccccccccccc-CCccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCC
Confidence 55668999999999999998831 12213455567789999999999999 6 7999999999999999999 99999
Q ss_pred cCCCCCCCC------------CC-CCCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccch--hHHHHHHh
Q 004637 604 GYNIPLPSK------------KG-LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDG--LKLQLETC 668 (740)
Q Consensus 604 DFGla~~~~------------~~-~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~--~~~~~~~~ 668 (740)
|||+|.... .+ ...+.++|............|+||.|+++.-+++|..|+....... ...|+...
T Consensus 168 df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~ 247 (601)
T KOG0590|consen 168 DFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK 247 (601)
T ss_pred CchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc
Confidence 999984322 23 4445566665544456788999999999999999999987543322 11111110
Q ss_pred hhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhh
Q 004637 669 LAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 669 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 722 (740)
. ... ............++..+++..+|+.|.+.+++-..-.
T Consensus 248 ~-----~~~--------~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~ 288 (601)
T KOG0590|consen 248 G-----RFT--------QLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNW 288 (601)
T ss_pred c-----ccc--------cCccccCChhhhhcccccccCCchhcccccccccccc
Confidence 0 000 0011111233457888899999999999988765443
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.3e-13 Score=149.56 Aligned_cols=196 Identities=27% Similarity=0.342 Sum_probs=171.0
Q ss_pred cEeecccccCccCCCccccCCCCCCEEEcccCcCccccCcccCCCC-CCCeeeccCccCcccCCCCCCCCCCCEEECCCC
Q 004637 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLK-NLKSIVLADNLLNGSVPDLQRLVLLEELNLGGN 205 (740)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N 205 (740)
..|++..|.+...+. .+..++.++.|++.+|.++ .+|+..+.++ +|+.|++++|++...+..++.+++|+.|++++|
T Consensus 96 ~~l~~~~~~~~~~~~-~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 96 PSLDLNLNRLRSNIS-ELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred ceeeccccccccCch-hhhcccceeEEecCCcccc-cCccccccchhhcccccccccchhhhhhhhhccccccccccCCc
Confidence 468888888854443 5677799999999999999 8999988885 999999999999988778999999999999999
Q ss_pred CCCCCCcC--CCCCCcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCcc
Q 004637 206 DFGPKFPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVN 283 (740)
Q Consensus 206 ~l~~~~p~--~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 283 (740)
+++...+. ...+|+.|++++|+++ .+|.....+..|++|++++|.+. ..+..+.++.++..+.+++|++. .++..
T Consensus 174 ~l~~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~ 250 (394)
T COG4886 174 DLSDLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPES 250 (394)
T ss_pred hhhhhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccch
Confidence 99877776 5789999999999998 78887777788999999999655 46777899999999999999986 35788
Q ss_pred ccCCCCCCEEEccCccccccCCCCcCCCCCCceeecCCCCCCCCCC
Q 004637 284 ISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (740)
Q Consensus 284 ~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (740)
++.+++++.|++++|+++. ++. ++.+.+++.+++++|.++...+
T Consensus 251 ~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 251 IGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hccccccceeccccccccc-ccc-ccccCccCEEeccCccccccch
Confidence 9999999999999999994 555 8899999999999999987654
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.5e-12 Score=149.77 Aligned_cols=107 Identities=25% Similarity=0.373 Sum_probs=98.0
Q ss_pred CcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCCccccCCCCCCEEEccC
Q 004637 218 IVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297 (740)
Q Consensus 218 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~ 297 (740)
++.|+|++|.++|.+|..++++++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+|+|.+|+.++++++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCcCCC-CCCceeecCCCCC
Q 004637 298 NLLIGKLPSCIGSN-SLNRTVVSTWNCL 324 (740)
Q Consensus 298 N~l~~~~p~~~~~~-~~l~~l~l~~N~l 324 (740)
|+|+|.+|..++.. ..+..+++.+|..
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCcc
Confidence 99999999988764 3556778887764
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.5e-11 Score=117.98 Aligned_cols=130 Identities=15% Similarity=0.034 Sum_probs=94.9
Q ss_pred CCeeecCCCccEEEEEecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccce-eeceeeeeccCCCCCCCceEEEE
Q 004637 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVS-ILGHCILTYQDHPNTGSTVFLVL 534 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~-l~g~~~~~~~~~~~~~~~~~lV~ 534 (740)
.+.++.|.++.||+++.. ++.|++|....... ....+.+|+++++.+.+.++++ ++++. ....++||
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~----------~~~~~lv~ 70 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD----------PETGVLIT 70 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe----------CCCCeEEE
Confidence 356889999999999865 77899998764432 2245788999999997655543 43321 11247999
Q ss_pred ecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCC--CCCceecCCCCCceeecCCCceeEecCCCCC
Q 004637 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV--APGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 535 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlKp~NILld~~~~~kl~DFGla~ 609 (740)
||++|.++.+.- . ....++.+++++|+.||... ...++|+|+||.||+++ ++.+++.|||.+.
T Consensus 71 e~i~G~~l~~~~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 71 EFIEGSELLTED--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred EecCCCcccccc--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 999998876431 0 11345678999999999832 12369999999999999 6789999999864
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.7e-12 Score=138.24 Aligned_cols=142 Identities=18% Similarity=0.195 Sum_probs=89.7
Q ss_pred HhcCCCCCCeeecCCCccEEEEEecC-CCEEEEEEeeccccc----------------------------------Chh-
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRH----------------------------------LPQ- 492 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~----------------------------------~~~- 492 (740)
....|+. +.||+|++|+||+|++.+ |+.||||+.+..-.. ..+
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3455776 789999999999999877 999999999743100 011
Q ss_pred -----HHHHHHHHHhhcc----CcccceeeceeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCC----CCCHHH
Q 004637 493 -----SLMQHVELLSKLR----HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKD----MLKWPQ 559 (740)
Q Consensus 493 -----~~~~Ei~il~~l~----H~nIv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~----~l~~~~ 559 (740)
++.+|+..+.+++ +.+.+.+-.++. +-....+|||||++|+.+.++-.- ...+ .+....
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~-------d~st~~VLvmE~i~G~~l~d~~~l-~~~g~d~~~la~~~ 268 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYW-------DYCSETVMVMERMYGIPVSDVAAL-RAAGTDMKLLAERG 268 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeec-------ccCCCceEEEeeecCccHHhHHHH-HhcCCCHHHHHHHH
Confidence 2334444444442 333333222221 112346899999999999874211 1111 122222
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC----ceeEecCCCCC
Q 004637 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL----TAKLSGYNIPL 609 (740)
Q Consensus 560 ~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~----~~kl~DFGla~ 609 (740)
...++.|+ +. .|++|+|+||.||+++.++ .+++.|||+..
T Consensus 269 v~~~~~Qi-------f~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg 312 (537)
T PRK04750 269 VEVFFTQV-------FR---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVG 312 (537)
T ss_pred HHHHHHHH-------Hh---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEE
Confidence 23333333 33 5999999999999999888 99999999974
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.7e-10 Score=108.55 Aligned_cols=136 Identities=10% Similarity=0.080 Sum_probs=96.2
Q ss_pred CCeeecCCCccEEEEEecC-------CCEEEEEEeeccc------------c-c---------ChhHH----HHHHHHHh
Q 004637 456 TNLIGEGSQGQLYKGFLTD-------GSRVSVKCLKLKQ------------R-H---------LPQSL----MQHVELLS 502 (740)
Q Consensus 456 ~~~iG~G~fg~Vy~~~~~~-------g~~vAvK~l~~~~------------~-~---------~~~~~----~~Ei~il~ 502 (740)
...||.|.=+.||.|...+ +..+|||+.+... . . ..+.+ .+|.+.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998543 4799999986321 0 0 01122 37999999
Q ss_pred hccC--cccceeeceeeeeccCCCCCCCceEEEEecccCcchhh-hcccccCCCCCCHHHHHHHHHHHHHHHHHH-HcCC
Q 004637 503 KLRH--RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRD-YLTDWKKKDMLKWPQRMAIIIGATRGVQFL-HTGV 578 (740)
Q Consensus 503 ~l~H--~nIv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~ 578 (740)
++.. -++.+.+++. ..++||||+.++.+.. .++ ...++..+...+..+++.+|.++ |.
T Consensus 82 rl~~~Gv~vP~pi~~~------------~~~lvME~Ig~~~~~~~~Lk----d~~~~~~~~~~i~~~i~~~l~~l~H~-- 143 (197)
T cd05146 82 RMQKAGIPCPEVVVLK------------KHVLVMSFIGDDQVPAPKLK----DAKLNDEEMKNAYYQVLSMMKQLYKE-- 143 (197)
T ss_pred HHHHcCCCCCeEEEec------------CCEEEEEEcCCCCccchhhh----ccccCHHHHHHHHHHHHHHHHHHHHh--
Confidence 9853 3555555431 2589999997654422 222 12344455677889999999999 66
Q ss_pred CCCceecCCCCCceeecCCCceeEecCCCCCCC
Q 004637 579 APGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 579 ~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~ 611 (740)
.+|||+||++.||+++ ++.+.++|||.+...
T Consensus 144 -~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 144 -CNLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred -CCeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 6999999999999997 468999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.2e-10 Score=111.32 Aligned_cols=144 Identities=17% Similarity=0.228 Sum_probs=109.0
Q ss_pred CeeecCCCccEEEEEecCCCEEEEEEeecccc-cChhHHHHHHHHHhhccCc--ccceeeceeeeeccCCCCCCCceEEE
Q 004637 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHR--HLVSILGHCILTYQDHPNTGSTVFLV 533 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~~Ei~il~~l~H~--nIv~l~g~~~~~~~~~~~~~~~~~lV 533 (740)
+.|+.|.++.||++...+|+.+++|....... .....+.+|+++++.+++. ++.++++++... ...+..++|
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~-----~~~~~~~~v 78 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDP-----SVLGTPFYV 78 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCC-----CccCCceEE
Confidence 57899999999999987778999998764432 2346789999999999763 456666554210 112346899
Q ss_pred EecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCC-----------------------------------
Q 004637 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV----------------------------------- 578 (740)
Q Consensus 534 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------- 578 (740)
|||++|+++.+.+.. ..++..++..++.+++++|.+||+..
T Consensus 79 ~e~i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (223)
T cd05154 79 MERVDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEP 154 (223)
T ss_pred EEEeCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccccc
Confidence 999999988876521 34677778888889999999998521
Q ss_pred ------------------CCCceecCCCCCceeecC--CCceeEecCCCCC
Q 004637 579 ------------------APGIFGNNLKTENILLDK--ALTAKLSGYNIPL 609 (740)
Q Consensus 579 ------------------~~~iiHrDlKp~NILld~--~~~~kl~DFGla~ 609 (740)
...++|+|++|.||+++. ++.+.|.||+.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 155 PAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 245799999999999998 6778999998764
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.1e-11 Score=128.04 Aligned_cols=180 Identities=21% Similarity=0.221 Sum_probs=121.1
Q ss_pred cCCCCCcEeecccccCccCCC--ccccCCCCCCEEEcccCcCccccC--cccCCCCCCCeeeccCccCcccCCC--CCCC
Q 004637 121 TKLSNLKVLSLVSLGLWGPLP--SKINRFWSLEVLNISSNFIYGEIP--MEITSLKNLKSIVLADNLLNGSVPD--LQRL 194 (740)
Q Consensus 121 ~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~Ls~N~l~g~~p--~~~~~l~~L~~L~L~~N~l~~~~~~--~~~l 194 (740)
.++.+|+...|.+... +..+ .....|++++.||||.|-|..-.| .....|++|+.|+|+.|+|.-...+ -..+
T Consensus 118 sn~kkL~~IsLdn~~V-~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRV-EDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCccc-cccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 4678888888887777 3444 356678888888888888873322 3345688888888888888765553 2356
Q ss_pred CCCCEEECCCCCCCCC----CcCCCCCCcEEEcccCcCcccCCccccCCCCCcEEEccCCcccccc-chhhccCCCccEE
Q 004637 195 VLLEELNLGGNDFGPK----FPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI-QSFLFSLPSILYL 269 (740)
Q Consensus 195 ~~L~~L~L~~N~l~~~----~p~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~-p~~~~~l~~L~~L 269 (740)
+.|+.|.|+.+.|+-. +-..+++|+.|+|..|...+.--.....+..|+.|||++|++-... -...+.++.|+.|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 7788888888888622 1123577888888888533333334455677888888888876322 1345677888888
Q ss_pred eccccccccc-CCcc-----ccCCCCCCEEEccCcccc
Q 004637 270 NLAGNQLSEA-LPVN-----ISCSAKLNFVEISHNLLI 301 (740)
Q Consensus 270 ~l~~N~l~~~-~p~~-----~~~l~~L~~l~ls~N~l~ 301 (740)
+++.+.+... .|+. .....+|++|+++.|++.
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 8888777642 2332 245677888888888775
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.4e-10 Score=125.65 Aligned_cols=245 Identities=17% Similarity=0.193 Sum_probs=166.8
Q ss_pred HHHhcCCCCCCeeecCCCccEEEEEe--cCCCEEEEEEeecccccChhH--HHHHHHHHhhc-cCcccceeeceeeeecc
Q 004637 447 EEATNNFDPTNLIGEGSQGQLYKGFL--TDGSRVSVKCLKLKQRHLPQS--LMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (740)
Q Consensus 447 ~~~~~~f~~~~~iG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~--~~~Ei~il~~l-~H~nIv~l~g~~~~~~~ 521 (740)
...+.+|.....||.|.|+.||+... .++..|++|.+.........+ -..|+-+...+ .|.++++++..+.
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~---- 336 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS---- 336 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcc----
Confidence 34556788899999999999999874 467899999887553332222 24566666555 4888888765543
Q ss_pred CCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCC-Cce
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTA 600 (740)
Q Consensus 522 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~-~~~ 600 (740)
.....|+=.|||+++++.... .-...++...++++..|++.++.++|+ +.++|+|+||+||++..+ +..
T Consensus 337 ----~~r~~~ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~ 406 (524)
T KOG0601|consen 337 ----QLRQGYIPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFS 406 (524)
T ss_pred ----ccccccCchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhh
Confidence 233467899999999987766 234457777889999999999999998 899999999999999876 889
Q ss_pred eEecCCCCCCC--CCC----CCCcc-ccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHHHHHhhhcCC
Q 004637 601 KLSGYNIPLPS--KKG----LESPL-RGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673 (740)
Q Consensus 601 kl~DFGla~~~--~~~----~~~~~-~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 673 (740)
++.|||++... ..+ ....+ ..+.......+..+.|+||||..+.|.++|...-.... .+..
T Consensus 407 ~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-----~~~~------- 474 (524)
T KOG0601|consen 407 KLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV-----QSLT------- 474 (524)
T ss_pred hccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCcccc-----ccee-------
Confidence 99999987421 111 11122 23444444456789999999999999999875332111 0100
Q ss_pred cccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHHHhhhh
Q 004637 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 674 ~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 724 (740)
+....-+.... ...++..+...+...++..||.+.+.....+..
T Consensus 475 --i~~~~~p~~~~-----~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 475 --IRSGDTPNLPG-----LKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred --eecccccCCCc-----hHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 01111111111 012334667778899999999999887665543
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.3e-10 Score=110.16 Aligned_cols=57 Identities=28% Similarity=0.373 Sum_probs=8.7
Q ss_pred CCCCEEEcccCcCccccCcccC-CCCCCCeeeccCccCcccCCCCCCCCCCCEEECCCCCC
Q 004637 148 WSLEVLNISSNFIYGEIPMEIT-SLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDF 207 (740)
Q Consensus 148 ~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l 207 (740)
.++++|+|++|.|+ .|. .++ .+.+|+.|+|++|.++.. +.+..++.|+.|+|++|++
T Consensus 19 ~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l-~~l~~L~~L~~L~L~~N~I 76 (175)
T PF14580_consen 19 VKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL-EGLPGLPRLKTLDLSNNRI 76 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S---TT----TT--EEE--SS--
T ss_pred cccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc-cCccChhhhhhcccCCCCC
Confidence 34444444444444 222 232 244444444444444432 2344444444444444444
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.07 E-value=3e-11 Score=118.66 Aligned_cols=204 Identities=23% Similarity=0.202 Sum_probs=137.1
Q ss_pred hhhhcCCCCCcEeecccccCccCCCccccCCCCCCEEEcccCcCccccCcccCCCCCCCeeeccCcc-CcccCC-CCCCC
Q 004637 117 FTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL-LNGSVP-DLQRL 194 (740)
Q Consensus 117 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~~-~~~~l 194 (740)
|-.+.-+.+|+.+.++.+.- ..|-+-...-+.|+++...+..++ ..|.- -..+.+..+.-+.-. .+|..- .+.-+
T Consensus 207 ~f~l~~f~~l~~~~~s~~~~-~~i~~~~~~kptl~t~~v~~s~~~-~~~~l-~pe~~~~D~~~~E~~t~~G~~~~~~dTW 283 (490)
T KOG1259|consen 207 SFNLNAFRNLKTLKFSALST-ENIVDIELLKPTLQTICVHNTTIQ-DVPSL-LPETILADPSGSEPSTSNGSALVSADTW 283 (490)
T ss_pred ccchHHhhhhheeeeeccch-hheeceeecCchhheeeeeccccc-ccccc-cchhhhcCccCCCCCccCCceEEecchH
Confidence 33344556666666665543 122222223356788887776665 33321 122223222222111 222211 35567
Q ss_pred CCCCEEECCCCCCCCCCcC--CCCCCcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecc
Q 004637 195 VLLEELNLGGNDFGPKFPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLA 272 (740)
Q Consensus 195 ~~L~~L~L~~N~l~~~~p~--~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 272 (740)
..|+.||||+|.++..--+ ..+.++.|++++|.++ .+ +.+..|++|+.||||+|.++ .+-.+-.++.+++.|+|+
T Consensus 284 q~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 284 QELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhhccccccchhhhhhhhhhccceeEEecccccee-ee-hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 7899999999988643332 3578999999999997 33 34889999999999999998 566677789999999999
Q ss_pred cccccccCCccccCCCCCCEEEccCccccccC-CCCcCCCCCCceeecCCCCCCCCC
Q 004637 273 GNQLSEALPVNISCSAKLNFVEISHNLLIGKL-PSCIGSNSLNRTVVSTWNCLSGVN 328 (740)
Q Consensus 273 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~-p~~~~~~~~l~~l~l~~N~l~~~~ 328 (740)
+|.+.. -..+..+-+|..||+++|++...- -..+|+++-|+.+.+.+|.+.+.+
T Consensus 361 ~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 361 QNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 999863 234677889999999999987321 246889999999999999999864
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-10 Score=125.87 Aligned_cols=237 Identities=17% Similarity=0.182 Sum_probs=159.9
Q ss_pred CCCCCCeeec--CCCccEEEEEe---cCCCEEEEEEeecc--cccChhHHHHHHHHHhhcc-CcccceeeceeeeeccCC
Q 004637 452 NFDPTNLIGE--GSQGQLYKGFL---TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDH 523 (740)
Q Consensus 452 ~f~~~~~iG~--G~fg~Vy~~~~---~~g~~vAvK~l~~~--~~~~~~~~~~Ei~il~~l~-H~nIv~l~g~~~~~~~~~ 523 (740)
.|.+...+|+ |.+|.||.+.. .++..+|+|.-+.. .......=.+|+.-.++++ |+|.++.+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~------- 187 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW------- 187 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc-------
Confidence 4566788999 99999999986 45888999984432 2233334456777677774 99999865444
Q ss_pred CCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHH----HHHHHHcCCCCCceecCCCCCceeecCC-C
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR----GVQFLHTGVAPGIFGNNLKTENILLDKA-L 598 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~iiHrDlKp~NILld~~-~ 598 (740)
+.++..++-+|+|. .+|.++.+.. ...++......+..+..+ |+.++|. ..|+|-|+||.||++..+ .
T Consensus 188 -e~~~~lfiqtE~~~-~sl~~~~~~~--~~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~ 260 (524)
T KOG0601|consen 188 -EGSGILFIQTELCG-ESLQSYCHTP--CNFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWT 260 (524)
T ss_pred -ccCCcceeeecccc-chhHHhhhcc--cccCCchhhhhHHhhhhhcccccccccCC---Ccccccccchhheecccccc
Confidence 46677899999996 5888887642 223555666777777777 9999999 699999999999999998 8
Q ss_pred ceeEecCCCCCCCCCCC--------------CCccccccccCCCCCCCccceehhhHHHHHHHhCCCCCCCCccchhHHH
Q 004637 599 TAKLSGYNIPLPSKKGL--------------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQ 664 (740)
Q Consensus 599 ~~kl~DFGla~~~~~~~--------------~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~ 664 (740)
..++.|||+......+. ..|.+++.. ..-++..+|+||+|.+..|-.+|..++...........
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~--~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~ 338 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELL--NGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL 338 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhh--ccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc
Confidence 89999999864332221 112222222 34467889999999999999999877654322211110
Q ss_pred HHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHHHHHH
Q 004637 665 LETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719 (740)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 719 (740)
- ....+....+ ....++...+..+++.+|..|++.+++..
T Consensus 339 r---~~~ip~e~~~------------~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 339 R---QGYIPLEFCE------------GGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred c---cccCchhhhc------------CcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0 0001101111 11122334777899999999999887654
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.9e-11 Score=119.98 Aligned_cols=133 Identities=24% Similarity=0.305 Sum_probs=75.5
Q ss_pred ccCCCCCCEEEcccCcCccccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCCEEECCCCCCCCCCcCCCCCCcEEEc
Q 004637 144 INRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVIL 223 (740)
Q Consensus 144 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~l 223 (740)
+.....|++||||+|.|+ .+-.+..-++.++.|++|+|.++.. ..++.|.+|+.||||+|.++.
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v-~nLa~L~~L~~LDLS~N~Ls~-------------- 343 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV-QNLAELPQLQLLDLSGNLLAE-------------- 343 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee-hhhhhcccceEeecccchhHh--------------
Confidence 344456677777777776 6666666667777777777776633 336666677777777766642
Q ss_pred ccCcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccC-CccccCCCCCCEEEccCccccc
Q 004637 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEAL-PVNISCSAKLNFVEISHNLLIG 302 (740)
Q Consensus 224 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~l~ls~N~l~~ 302 (740)
+-..=..|.+.+.|.|++|.+... ..++++-+|..||+++|++...- -..+++++-|+.+.|.+|.+.+
T Consensus 344 --------~~Gwh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 344 --------CVGWHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred --------hhhhHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 222222334445555555554321 22445555555566666554211 1245666667777777777664
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.6e-11 Score=132.45 Aligned_cols=213 Identities=23% Similarity=0.221 Sum_probs=127.7
Q ss_pred ccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEEEcccCcCccccCcccCCCCCCCeeecc
Q 004637 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (740)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 180 (740)
.+..+++..|.+.. +-..+..+++|+.|+|..|++.+. ...+..+++|++|+|++|+|+...+ +..++.|+.|+++
T Consensus 73 ~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 73 SLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLS 148 (414)
T ss_pred hHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccccc--hhhccchhhheec
Confidence 44455555665533 223366677777777777777443 3236667777777777777773322 4456667777777
Q ss_pred CccCcccCCCCCCCCCCCEEECCCCCCCCCCc---CCCCCCcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccc
Q 004637 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFP---SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ 257 (740)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p 257 (740)
+|.++. ++.+..+.+|+.+++++|++...-+ ..+.+++.+++.+|.+.- ...+..+..+..+++..|.++-.-+
T Consensus 149 ~N~i~~-~~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~~~~~ 225 (414)
T KOG0531|consen 149 GNLISD-ISGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKISKLEG 225 (414)
T ss_pred cCcchh-ccCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccceeccC
Confidence 777763 3455567777777777777766555 455677777777777752 2334445555556777777763221
Q ss_pred hhhccCCC--ccEEecccccccccCCccccCCCCCCEEEccCccccccCCCCcCCCCCCceeecCCCCCC
Q 004637 258 SFLFSLPS--ILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325 (740)
Q Consensus 258 ~~~~~l~~--L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~ 325 (740)
+..+.. |+.+++++|.+. .++..+..+.++..|++++|+++.. ..+.....+..+....|.+.
T Consensus 226 --l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 226 --LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred --cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 112222 677777777776 3445566677777777777776632 11223333444444555443
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.93 E-value=5e-09 Score=114.78 Aligned_cols=159 Identities=21% Similarity=0.316 Sum_probs=115.6
Q ss_pred ecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEEecccCcchhhhcccccC
Q 004637 472 LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551 (740)
Q Consensus 472 ~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~ 551 (740)
..++.+|.|...+.......+...+-++.|+.+|||||++++..+. ..+..|+|+|-+. -|..++.+
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e--------~~~~~ylvTErV~--Pl~~~lk~--- 100 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTE--------EEGTLYLVTERVR--PLETVLKE--- 100 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhc--------ccCceEEEeeccc--cHHHHHHH---
Confidence 5678899999888665433455677888999999999999997553 4557999999984 67777753
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCCCCCCccccccc---cCCC
Q 004637 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQYV---SNQP 628 (740)
Q Consensus 552 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~---~~~~ 628 (740)
+........+.||+.||.|||+. .+++|++|.-+-|+++..|+-||++|-.......... .....+. +..|
T Consensus 101 ---l~~~~v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P 174 (690)
T KOG1243|consen 101 ---LGKEEVCLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDP 174 (690)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccCh
Confidence 23445666789999999999974 6899999999999999999999999977533222111 0000000 0011
Q ss_pred CC----CCccceehhhHHHHHHHhC
Q 004637 629 GD----GAKEDVYQLGVILLQVITG 649 (740)
Q Consensus 629 ~~----~~ksDVwSfGvil~ElltG 649 (740)
.- +-..|.|-||++++|++.|
T Consensus 175 ~~~~~s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 175 EEIDPSEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hhcCccccchhhhhHHHHHHHHhCc
Confidence 11 1235999999999999999
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.5e-10 Score=119.76 Aligned_cols=182 Identities=18% Similarity=0.191 Sum_probs=141.0
Q ss_pred ccCCCCCCEEEcccCcCccccCc--ccCCCCCCCeeeccCccCcccCC---CCCCCCCCCEEECCCCCCCCCCcC----C
Q 004637 144 INRFWSLEVLNISSNFIYGEIPM--EITSLKNLKSIVLADNLLNGSVP---DLQRLVLLEELNLGGNDFGPKFPS----L 214 (740)
Q Consensus 144 ~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~L~~N~l~~~~~---~~~~l~~L~~L~L~~N~l~~~~p~----~ 214 (740)
=+++.+|+...|.+.... ..+. -...|++++.|||+.|.|+..-+ -...|++|+.|+|+.|+|.-...+ .
T Consensus 117 Qsn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 117 QSNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hhhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhh
Confidence 368899999999998886 4442 46679999999999999987655 257899999999999999644433 3
Q ss_pred CCCCcEEEcccCcCccc-CCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccccccCC--ccccCCCCCC
Q 004637 215 SKNIVSVILRNNSLRSE-IPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALP--VNISCSAKLN 291 (740)
Q Consensus 215 ~~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~~~~l~~L~ 291 (740)
++.|+.|.|+.|.|+.. +-..+..+++|+.|+|..|...+.--.....+..|+.|||++|++-. .+ ...+.++.|+
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~ 274 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLN 274 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchh
Confidence 68999999999999832 22345678999999999996433333445567889999999999864 44 4577889999
Q ss_pred EEEccCcccccc-CCCC-----cCCCCCCceeecCCCCCCCC
Q 004637 292 FVEISHNLLIGK-LPSC-----IGSNSLNRTVVSTWNCLSGV 327 (740)
Q Consensus 292 ~l~ls~N~l~~~-~p~~-----~~~~~~l~~l~l~~N~l~~~ 327 (740)
.|+++.+.+... .|++ .....+|+.|++..|++...
T Consensus 275 ~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w 316 (505)
T KOG3207|consen 275 QLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDW 316 (505)
T ss_pred hhhccccCcchhcCCCccchhhhcccccceeeecccCccccc
Confidence 999999988743 3443 34567899999999998653
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.4e-10 Score=127.92 Aligned_cols=217 Identities=23% Similarity=0.188 Sum_probs=158.7
Q ss_pred ccccccccCCcCCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEEEcccCcCccccCcccCCCCCCCeeecc
Q 004637 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (740)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 180 (740)
..+.++...+.+...--. ...+..++.+++..|.+.. +-..+..+++|+.|++..|+|. .+...+..+++|+.|+|+
T Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls 126 (414)
T KOG0531|consen 50 DLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLS 126 (414)
T ss_pred hhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecc
Confidence 344445554443322111 2567788888899999954 4445888999999999999998 566557889999999999
Q ss_pred CccCcccCCCCCCCCCCCEEECCCCCCCCCCcC-CCCCCcEEEcccCcCcccCCcc-ccCCCCCcEEEccCCccccccch
Q 004637 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS-LSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQS 258 (740)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~g~~p~ 258 (740)
+|+|+.+ ..+..+..|+.|++++|.++..--- .+.+|+.+++++|++...-+ . ...+.+|+.+++.+|.+.- ..
T Consensus 127 ~N~I~~i-~~l~~l~~L~~L~l~~N~i~~~~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~~--i~ 202 (414)
T KOG0531|consen 127 FNKITKL-EGLSTLTLLKELNLSGNLISDISGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIRE--IE 202 (414)
T ss_pred ccccccc-cchhhccchhhheeccCcchhccCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchhc--cc
Confidence 9999854 4477777899999999999643221 27889999999999984433 2 5778899999999999873 23
Q ss_pred hhccCCCccEEecccccccccCCccccCCCC--CCEEEccCccccccCCCCcCCCCCCceeecCCCCCCCC
Q 004637 259 FLFSLPSILYLNLAGNQLSEALPVNISCSAK--LNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (740)
Q Consensus 259 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~--L~~l~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (740)
.+..+..+..+++..|.++..-+ +..+.. |+.+++++|.+. .++..+..+..+..+++..|.++..
T Consensus 203 ~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~ 270 (414)
T KOG0531|consen 203 GLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL 270 (414)
T ss_pred chHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc
Confidence 34555666677889998875332 223333 889999999988 4446677778888999998887764
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.2e-10 Score=115.49 Aligned_cols=181 Identities=19% Similarity=0.207 Sum_probs=119.4
Q ss_pred cCCCCCCEEEcccCcCccccCcc----cCCCCCCCeeeccCccCcccCC--------------CCCCCCCCCEEECCCCC
Q 004637 145 NRFWSLEVLNISSNFIYGEIPME----ITSLKNLKSIVLADNLLNGSVP--------------DLQRLVLLEELNLGGND 206 (740)
Q Consensus 145 ~~l~~L~~L~Ls~N~l~g~~p~~----~~~l~~L~~L~L~~N~l~~~~~--------------~~~~l~~L~~L~L~~N~ 206 (740)
-.+++|++||||.|.|.-.-+.. +.+++.|+.|+|.+|.+.-.-. -...=+.|+++..++|+
T Consensus 89 ~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNr 168 (382)
T KOG1909|consen 89 LGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNR 168 (382)
T ss_pred hcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccc
Confidence 34456666666666665333322 3456667777777666642100 13344678888888888
Q ss_pred CCCCCcC-------CCCCCcEEEcccCcCccc----CCccccCCCCCcEEEccCCccccc----cchhhccCCCccEEec
Q 004637 207 FGPKFPS-------LSKNIVSVILRNNSLRSE----IPSGLKNFDQLKQFDISSNNFVGP----IQSFLFSLPSILYLNL 271 (740)
Q Consensus 207 l~~~~p~-------~~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l 271 (740)
+...... ..+.|+.+.+..|.+... +-..|..|++|+.|||.+|-|+.. +...+..+++|+.|++
T Consensus 169 len~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l 248 (382)
T KOG1909|consen 169 LENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNL 248 (382)
T ss_pred cccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecc
Confidence 7432221 135778888888877521 223478899999999999999732 3445667889999999
Q ss_pred ccccccccCCccc-----cCCCCCCEEEccCccccc----cCCCCcCCCCCCceeecCCCCCC
Q 004637 272 AGNQLSEALPVNI-----SCSAKLNFVEISHNLLIG----KLPSCIGSNSLNRTVVSTWNCLS 325 (740)
Q Consensus 272 ~~N~l~~~~p~~~-----~~l~~L~~l~ls~N~l~~----~~p~~~~~~~~l~~l~l~~N~l~ 325 (740)
+++.+...=..++ ...++|++|.|.+|.++. .+-.++...+.|..|++++|.+.
T Consensus 249 ~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 249 GDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 9998875322222 235789999999999873 23445666788999999999884
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.9e-08 Score=93.90 Aligned_cols=130 Identities=22% Similarity=0.253 Sum_probs=92.1
Q ss_pred CeeecCCCccEEEEEecCCCEEEEEEeecccccC--------hhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCC
Q 004637 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL--------PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--------~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~ 528 (740)
..+++|+=+.+|.+.+. |..+++|.=..+.... .....+|+.++.+++--.|..-+=|.+ +.+
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv--------D~~ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV--------DPD 72 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE--------cCC
Confidence 35789999999999764 4446666543322111 235678999999886433332222222 233
Q ss_pred ceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCC
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla 608 (740)
...|+|||++|-.|.+.+... ...++..+-+-+.-||. .+|||+||.++||++..+. +.++|||++
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg 138 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEA----------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLG 138 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhc----------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcc
Confidence 468999999998888888531 24567777777888999 6999999999999998765 999999997
Q ss_pred C
Q 004637 609 L 609 (740)
Q Consensus 609 ~ 609 (740)
.
T Consensus 139 ~ 139 (204)
T COG3642 139 E 139 (204)
T ss_pred c
Confidence 5
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.2e-09 Score=101.79 Aligned_cols=107 Identities=27% Similarity=0.389 Sum_probs=31.7
Q ss_pred CCCCCCeeeccCccCcccCCCCC-CCCCCCEEECCCCCCCCCCcCCCCCCcEEEcccCcCcccCCccccCCCCCcEEEcc
Q 004637 170 SLKNLKSIVLADNLLNGSVPDLQ-RLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDIS 248 (740)
Q Consensus 170 ~l~~L~~L~L~~N~l~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 248 (740)
+..+++.|+|++|+|+. +..++ .+.+|+.|||++|+++ .++ .+..+++|++|+++
T Consensus 17 n~~~~~~L~L~~n~I~~-Ie~L~~~l~~L~~L~Ls~N~I~----------------------~l~-~l~~L~~L~~L~L~ 72 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIST-IENLGATLDKLEVLDLSNNQIT----------------------KLE-GLPGLPRLKTLDLS 72 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S------------------------T-T----TT--EEE--
T ss_pred ccccccccccccccccc-ccchhhhhcCCCEEECCCCCCc----------------------ccc-CccChhhhhhcccC
Confidence 44456666666666654 23444 3556666666666553 222 35567777777777
Q ss_pred CCccccccchhh-ccCCCccEEecccccccccCC-ccccCCCCCCEEEccCcccc
Q 004637 249 SNNFVGPIQSFL-FSLPSILYLNLAGNQLSEALP-VNISCSAKLNFVEISHNLLI 301 (740)
Q Consensus 249 ~N~l~g~~p~~~-~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~l~ls~N~l~ 301 (740)
+|+|+. +++.+ ..+++|+.|+|++|++...-- ..+..+++|+.|+|.+|.++
T Consensus 73 ~N~I~~-i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 73 NNRISS-ISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp SS---S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCCCCc-cccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 777774 33333 357777777777777754211 23556677777777777766
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.1e-08 Score=92.92 Aligned_cols=142 Identities=20% Similarity=0.198 Sum_probs=98.1
Q ss_pred CCCeeecCCCccEEEEEecCCCEEEEEEeeccccc--------ChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCC
Q 004637 455 PTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 455 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--------~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~ 526 (740)
....|-+|+-+.|+++.+. |+...||.=..+... ..++..+|++.+.+++--.|.--.=++.+.
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~------- 82 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDT------- 82 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEec-------
Confidence 4678999999999999985 677667654322211 235678899999998633333222223322
Q ss_pred CCceEEEEecccC-cchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCC---ceeE
Q 004637 527 GSTVFLVLEHISN-GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL---TAKL 602 (740)
Q Consensus 527 ~~~~~lV~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~---~~kl 602 (740)
..-.|+|||.++ .++.+++.........+ ......+..|-+.+.-||. .+|||+||..+||++..++ .+.+
T Consensus 83 -~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d-~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~l 157 (229)
T KOG3087|consen 83 -YGGQIYMEFIDGASTVKDFILSTMEDESED-EGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPIL 157 (229)
T ss_pred -CCCeEEEEeccchhHHHHHHHHHccCcccc-hhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEE
Confidence 224899999976 47888886533222222 2236778888899999999 5999999999999997654 4589
Q ss_pred ecCCCCC
Q 004637 603 SGYNIPL 609 (740)
Q Consensus 603 ~DFGla~ 609 (740)
+|||++.
T Consensus 158 Idfgls~ 164 (229)
T KOG3087|consen 158 IDFGLSS 164 (229)
T ss_pred Eeecchh
Confidence 9999974
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.5e-08 Score=97.75 Aligned_cols=124 Identities=17% Similarity=0.219 Sum_probs=79.9
Q ss_pred cEEEEEecCCCEEEEEEeecccc-------------c-------------ChhHHHHHHHHHhhccCc--ccceeeceee
Q 004637 466 QLYKGFLTDGSRVSVKCLKLKQR-------------H-------------LPQSLMQHVELLSKLRHR--HLVSILGHCI 517 (740)
Q Consensus 466 ~Vy~~~~~~g~~vAvK~l~~~~~-------------~-------------~~~~~~~Ei~il~~l~H~--nIv~l~g~~~ 517 (740)
.||.|...+|..+|||+.+.... . ......+|.+.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999998999999999863210 0 012467899999999755 455555432
Q ss_pred eeccCCCCCCCceEEEEeccc--CcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHH-HcCCCCCceecCCCCCceee
Q 004637 518 LTYQDHPNTGSTVFLVLEHIS--NGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL-HTGVAPGIFGNNLKTENILL 594 (740)
Q Consensus 518 ~~~~~~~~~~~~~~lV~Ey~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDlKp~NILl 594 (740)
..++||||++ |..+..+... . ++......++.+++..+..+ |. .+|+|+|+.+.||++
T Consensus 80 -----------~~~ivME~I~~~G~~~~~l~~~-~----~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv 140 (188)
T PF01163_consen 80 -----------RNVIVMEYIGEDGVPLPRLKDV-D----LSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILV 140 (188)
T ss_dssp -----------TTEEEEE--EETTEEGGCHHHC-G----GGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEE
T ss_pred -----------CCEEEEEecCCCccchhhHHhc-c----ccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEe
Confidence 1489999998 5445443321 1 11233456777777766664 56 799999999999999
Q ss_pred cCCCceeEecCCCCCC
Q 004637 595 DKALTAKLSGYNIPLP 610 (740)
Q Consensus 595 d~~~~~kl~DFGla~~ 610 (740)
+++ .+.++|||.+..
T Consensus 141 ~~~-~~~iIDf~qav~ 155 (188)
T PF01163_consen 141 DDG-KVYIIDFGQAVD 155 (188)
T ss_dssp ETT-CEEE--GTTEEE
T ss_pred ecc-eEEEEecCccee
Confidence 987 999999998743
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.6e-09 Score=121.77 Aligned_cols=239 Identities=16% Similarity=0.153 Sum_probs=150.9
Q ss_pred HhcCCCCCCeeecCCCccEEEEE-ecCCCEEEEEEeecc---cccChhHHHHHHHHHhhccCcccceeeceeeeeccCCC
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 449 ~~~~f~~~~~iG~G~fg~Vy~~~-~~~g~~vAvK~l~~~---~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~ 524 (740)
..+.|.+.+-+-+|+++.++-++ -..|...+.|..... .....+....+-.++-..+||-+++...- +
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s--------~ 873 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS--------F 873 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC--------C
Confidence 44667777888899999999876 223434444443321 11222333444444444456777655432 2
Q ss_pred CCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEec
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~D 604 (740)
......++|++|..+|+|...|+.. +..+..........+..+++|||. ..+.|||+||.|++...+++.+++|
T Consensus 874 ~~rsP~~L~~~~~~~~~~~Skl~~~---~~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~ 947 (1205)
T KOG0606|consen 874 PCRSPLPLVGHYLNGGDLPSKLHNS---GCLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTD 947 (1205)
T ss_pred CCCCCcchhhHHhccCCchhhhhcC---CCcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCc
Confidence 3455689999999999999998752 234444445556667789999998 4599999999999999999999999
Q ss_pred CCCCCCC-------------C---------------------------CCCCCccccccccCCCCCCCccceehhhHHHH
Q 004637 605 YNIPLPS-------------K---------------------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILL 644 (740)
Q Consensus 605 FGla~~~-------------~---------------------------~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ 644 (740)
||..... . .++..+.+||... ....+..+|.|++|++++
T Consensus 948 ~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~l-g~~hgs~ad~~~~g~~l~ 1026 (1205)
T KOG0606|consen 948 FGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILL-GRRHGSAADWWSSGVCLF 1026 (1205)
T ss_pred cccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccc-cccCCCcchhhhhhhhhh
Confidence 9843110 0 0111122222222 233467899999999999
Q ss_pred HHHhCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhccccCCCCCCCHH
Q 004637 645 QVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIE 715 (740)
Q Consensus 645 ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ 715 (740)
|.++|.+||.........+.+.......+ .... +....+.+++.+.+..+|.+|-.|.
T Consensus 1027 e~l~g~pp~na~tpq~~f~ni~~~~~~~p-~g~~------------~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1027 EVLTGIPPFNAETPQQIFENILNRDIPWP-EGPE------------EGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhcCCCCCCCcchhhhhhccccCCCCCC-CCcc------------ccChhhhhhhhhhhccCchhccCcc
Confidence 99999999987665554433322221111 1111 1112334777788888999987665
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.2e-09 Score=81.53 Aligned_cols=59 Identities=25% Similarity=0.408 Sum_probs=27.5
Q ss_pred CCcEEEccCCccccccchhhccCCCccEEecccccccccCCccccCCCCCCEEEccCcc
Q 004637 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNL 299 (740)
Q Consensus 241 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~ 299 (740)
+|+.|++++|+|+...+..|.++++|++|++++|+++...|..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444444333444444444444444444444444444444444444444444
|
... |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.7e-07 Score=99.62 Aligned_cols=172 Identities=19% Similarity=0.192 Sum_probs=127.6
Q ss_pred ccEEEEE-ecCCCEEEEEEeecccccChhHHHHHHHHHhhccCcccceeeceeeeeccCCCCCCCceEEEEecccC-cch
Q 004637 465 GQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISN-GSL 542 (740)
Q Consensus 465 g~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~Ei~il~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~-gsL 542 (740)
.+.||+. ..||..|+.|++...+......-..-+++++++.|+|||++..++... ...+..+++||+|.++ ++|
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~----tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTY----TFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhh----ccCcceEEEEEecCCCCchH
Confidence 4689998 568999999999644433333344557899999999999999887621 1245668999999986 567
Q ss_pred hhhccccc------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 543 RDYLTDWK------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 543 ~~~l~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
.++--... .....++...+.++.|++.||.++|+ .|..-+-|.|.+|+++.+.+++|+..|+.-.
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dv 442 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDV 442 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceee
Confidence 66543211 12346788999999999999999999 6999999999999999999999998887533
Q ss_pred CCCCCCCccccccccCCCCCCCccceehhhHHHHHHHhCCCC
Q 004637 611 SKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQV 652 (740)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~ksDVwSfGvil~ElltG~~p 652 (740)
..... ++.+. --.+-|.=.||.+++-|.||..-
T Consensus 443 l~~d~-----~~~le----~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 443 LQEDP-----TEPLE----SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred ecCCC-----Ccchh----HHhhhhHHHHHHHHHHHhhcccc
Confidence 22211 11111 12466888999999999999643
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.77 E-value=6.3e-09 Score=81.05 Aligned_cols=61 Identities=33% Similarity=0.507 Sum_probs=54.6
Q ss_pred CCCcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccccc
Q 004637 216 KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276 (740)
Q Consensus 216 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 276 (740)
++|++|++++|+++...+..|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3678888888888866667899999999999999999988889999999999999999986
|
... |
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.4e-09 Score=109.85 Aligned_cols=225 Identities=20% Similarity=0.182 Sum_probs=145.5
Q ss_pred CCEEEEEeCCCCCCCC----CCCCCcCCCcccccccccCC---cCCChhhh-------hhcCCCCCcEeecccccCccCC
Q 004637 75 SRVTELTVIGNKSSPA----HSPKPTFGKFSASQQSLSAN---FNIDRFFT-------ILTKLSNLKVLSLVSLGLWGPL 140 (740)
Q Consensus 75 ~~v~~l~l~~~~l~~~----~~~~~~~~~~~l~~l~l~~n---~~~~~~~~-------~~~~l~~L~~L~L~~n~l~~~~ 140 (740)
..++.|+|+||.+.-. +.+. .-...+|..-++|+= .....+|+ ++..+++|++||||.|.|.-.-
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~-L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKV-LASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHH-HhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 4677788887766210 0000 011124555555542 12223333 4456678888888888884333
Q ss_pred Cc----cccCCCCCCEEEcccCcCccccC--------------cccCCCCCCCeeeccCccCcccCC-----CCCCCCCC
Q 004637 141 PS----KINRFWSLEVLNISSNFIYGEIP--------------MEITSLKNLKSIVLADNLLNGSVP-----DLQRLVLL 197 (740)
Q Consensus 141 p~----~~~~l~~L~~L~Ls~N~l~g~~p--------------~~~~~l~~L~~L~L~~N~l~~~~~-----~~~~l~~L 197 (740)
+. -+..+..|++|.|.+|.+. ..- .-.++-++|+++..++|++..... .|...+.|
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~l 187 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLG-PEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTL 187 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCC-hhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhcccc
Confidence 32 3456778888888888875 211 123455778888888888864332 36677888
Q ss_pred CEEECCCCCCCCCCcC-------CCCCCcEEEcccCcCccc----CCccccCCCCCcEEEccCCccccccchhh-----c
Q 004637 198 EELNLGGNDFGPKFPS-------LSKNIVSVILRNNSLRSE----IPSGLKNFDQLKQFDISSNNFVGPIQSFL-----F 261 (740)
Q Consensus 198 ~~L~L~~N~l~~~~p~-------~~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~-----~ 261 (740)
+.+.++.|.+...--. -.++|+.|+|++|-|+.. +...+..+++|++|+++++.++..-...| .
T Consensus 188 eevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~ 267 (382)
T KOG1909|consen 188 EEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKE 267 (382)
T ss_pred ceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhc
Confidence 8899988887422111 147888899999988632 23456778899999999999975433333 2
Q ss_pred cCCCccEEeccccccccc----CCccccCCCCCCEEEccCcccc
Q 004637 262 SLPSILYLNLAGNQLSEA----LPVNISCSAKLNFVEISHNLLI 301 (740)
Q Consensus 262 ~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~ls~N~l~ 301 (740)
..++|+.|.|.+|.++.. +-..+...+.|+.|+|+.|++.
T Consensus 268 ~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 268 SAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 478999999999998742 2223455788999999999984
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.7e-07 Score=94.58 Aligned_cols=145 Identities=15% Similarity=0.115 Sum_probs=99.4
Q ss_pred CeeecCCCccEEEEEecCCCEEEEEEeecccc-----------cChhHHHHHHHHHhhccCcccc--eeeceeeeeccCC
Q 004637 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR-----------HLPQSLMQHVELLSKLRHRHLV--SILGHCILTYQDH 523 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-----------~~~~~~~~Ei~il~~l~H~nIv--~l~g~~~~~~~~~ 523 (740)
+.+-+.....|+++.+ +|+.|.||....... .....+.+|...+.++...+|. +.++|..... +
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~-~- 104 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGS-N- 104 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecC-C-
Confidence 4455444455777766 577899997743221 1112478999988888533333 3344432110 0
Q ss_pred CCCCCceEEEEecccCc-chhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecC------
Q 004637 524 PNTGSTVFLVLEHISNG-SLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK------ 596 (740)
Q Consensus 524 ~~~~~~~~lV~Ey~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~------ 596 (740)
.....-++|||++++- +|.+++.++. ....+...+..++.++++.+.-||. .||+|+|++++|||++.
T Consensus 105 -~~~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~ 179 (268)
T PRK15123 105 -PATRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGRE 179 (268)
T ss_pred -CccceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCC
Confidence 1123468999999875 7988885322 2334556778899999999999999 79999999999999975
Q ss_pred -CCceeEecCCCCC
Q 004637 597 -ALTAKLSGYNIPL 609 (740)
Q Consensus 597 -~~~~kl~DFGla~ 609 (740)
+..+.++||+.+.
T Consensus 180 ~~~~~~LIDl~r~~ 193 (268)
T PRK15123 180 EDLKLSVIDLHRAQ 193 (268)
T ss_pred CCceEEEEECCccc
Confidence 4789999999874
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.58 E-value=3.1e-07 Score=90.97 Aligned_cols=133 Identities=19% Similarity=0.164 Sum_probs=91.3
Q ss_pred CCCCCeeecCCCccEEEEEecCCCEEEEEEeecccc----------------------cChhHHHHHHHHHhhccCc--c
Q 004637 453 FDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR----------------------HLPQSLMQHVELLSKLRHR--H 508 (740)
Q Consensus 453 f~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~----------------------~~~~~~~~Ei~il~~l~H~--n 508 (740)
..+...||.|.=+.||.|..++|.++|||.=+.... .......+|.++|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 345789999999999999999999999997542210 0123467899999998644 5
Q ss_pred cceeeceeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCC
Q 004637 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588 (740)
Q Consensus 509 Iv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlK 588 (740)
|.+.++ .+...+||||++|-.|...-- ..-.... ++..|++-+.-.-. .||||+|+.
T Consensus 173 VP~P~~------------~nRHaVvMe~ieG~eL~~~r~-----~~en~~~---il~~il~~~~~~~~---~GiVHGDlS 229 (304)
T COG0478 173 VPKPIA------------WNRHAVVMEYIEGVELYRLRL-----DVENPDE---ILDKILEEVRKAYR---RGIVHGDLS 229 (304)
T ss_pred CCCccc------------cccceeeeehcccceeecccC-----cccCHHH---HHHHHHHHHHHHHH---cCccccCCc
Confidence 555553 234689999999866654320 1112222 33333332222223 599999999
Q ss_pred CCceeecCCCceeEecCCCC
Q 004637 589 TENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 589 p~NILld~~~~~kl~DFGla 608 (740)
+-||+++++|.+.++||--+
T Consensus 230 efNIlV~~dg~~~vIDwPQ~ 249 (304)
T COG0478 230 EFNILVTEDGDIVVIDWPQA 249 (304)
T ss_pred hheEEEecCCCEEEEeCccc
Confidence 99999999999999999654
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.1e-07 Score=112.39 Aligned_cols=127 Identities=24% Similarity=0.225 Sum_probs=91.9
Q ss_pred CEEEEEeCCCCCCCCCCCCCcCCCcccccccccCCc--CCChhhhhhcCCCCCcEeecccccCccCCCccccCCCCCCEE
Q 004637 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANF--NIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVL 153 (740)
Q Consensus 76 ~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~--~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 153 (740)
.+..+.+.+|.+.-... ....+.+.+|-+..|. +.....+.|..++.|++|||++|.=-+.+|..++.|-+|++|
T Consensus 524 ~~rr~s~~~~~~~~~~~---~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 524 SVRRMSLMNNKIEHIAG---SSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred heeEEEEeccchhhccC---CCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 44555555555421111 1122367777777776 444444557788999999999887778889999999999999
Q ss_pred EcccCcCccccCcccCCCCCCCeeeccCccCcccCCC-CCCCCCCCEEECCCCC
Q 004637 154 NISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGND 206 (740)
Q Consensus 154 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~ 206 (740)
+|++..++ .+|..+.+|..|.+|++..+.-...+|. +..|.+|++|.|-.-.
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 99999988 8899999999999999988876666666 4458888888886554
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=4.3e-09 Score=92.24 Aligned_cols=103 Identities=26% Similarity=0.297 Sum_probs=54.4
Q ss_pred cccccccCCcCCChhhh---hhcCCCCCcEeecccccCccCCCccccC-CCCCCEEEcccCcCccccCcccCCCCCCCee
Q 004637 102 ASQQSLSANFNIDRFFT---ILTKLSNLKVLSLVSLGLWGPLPSKINR-FWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177 (740)
Q Consensus 102 l~~l~l~~n~~~~~~~~---~~~~l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 177 (740)
+..++|+++.+. .+++ .+.....|...+|++|.| ..+|+.|.. ++.++.|+|++|.|+ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~f-k~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGF-KKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchh-hhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 444555555442 2233 233444555556666666 344444433 335666666666665 566666666666666
Q ss_pred eccCccCcccCCCCCCCCCCCEEECCCCCC
Q 004637 178 VLADNLLNGSVPDLQRLVLLEELNLGGNDF 207 (740)
Q Consensus 178 ~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l 207 (740)
++++|.|.-.+.-+..|.+|.+||..+|.+
T Consensus 106 Nl~~N~l~~~p~vi~~L~~l~~Lds~~na~ 135 (177)
T KOG4579|consen 106 NLRFNPLNAEPRVIAPLIKLDMLDSPENAR 135 (177)
T ss_pred ccccCccccchHHHHHHHhHHHhcCCCCcc
Confidence 666666655444444455555555555544
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.7e-09 Score=115.45 Aligned_cols=176 Identities=23% Similarity=0.198 Sum_probs=89.3
Q ss_pred CccccCCCCCCEEEcccCcCccccCcccCCC-CCCCeeeccCccCccc-------CCCCCC---CCCCCEEECCCCCCCC
Q 004637 141 PSKINRFWSLEVLNISSNFIYGEIPMEITSL-KNLKSIVLADNLLNGS-------VPDLQR---LVLLEELNLGGNDFGP 209 (740)
Q Consensus 141 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l-~~L~~L~L~~N~l~~~-------~~~~~~---l~~L~~L~L~~N~l~~ 209 (740)
|-.|..+.+|++|.|.+..|.. . ..+..+ .+|+.| +.+|.+... ..++.+ +..|...+.++|+|.-
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~-~-~GL~~lr~qLe~L-IC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~~ 178 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST-A-KGLQELRHQLEKL-ICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLVL 178 (1096)
T ss_pred CceeccccceeeEEecCcchhh-h-hhhHHHHHhhhhh-hhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHHh
Confidence 4456777777777777777652 1 111111 223333 122222211 111211 2345555666666542
Q ss_pred CCcC--CCCCCcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccch-hhccCCCccEEecccccccccCCccccC
Q 004637 210 KFPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS-FLFSLPSILYLNLAGNQLSEALPVNISC 286 (740)
Q Consensus 210 ~~p~--~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 286 (740)
.--+ +++.|+.|+|++|+++.. +.+..|+.|++|||+.|+|. .+|. ...++. |+.|+|.+|.++.. ..+.+
T Consensus 179 mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~ 252 (1096)
T KOG1859|consen 179 MDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTTL--RGIEN 252 (1096)
T ss_pred HHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHHhh--hhHHh
Confidence 2211 235566666666666532 25666666677777777666 3332 222333 66667776666532 12556
Q ss_pred CCCCCEEEccCccccccCC-CCcCCCCCCceeecCCCCCC
Q 004637 287 SAKLNFVEISHNLLIGKLP-SCIGSNSLNRTVVSTWNCLS 325 (740)
Q Consensus 287 l~~L~~l~ls~N~l~~~~p-~~~~~~~~l~~l~l~~N~l~ 325 (740)
+.+|+.|||++|-|++.-- ..++.+..|+.|+|.+|.+.
T Consensus 253 LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 253 LKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 6666777777776654211 11344555666666666654
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.9e-07 Score=65.05 Aligned_cols=38 Identities=24% Similarity=0.551 Sum_probs=29.6
Q ss_pred HhHHHHHHHHHHhCC-CC-CCCCCCCCC--CCCCCCCCCCcccEEeC
Q 004637 31 PSETRILFQVQKLLE-YP-EVLQGWTDW--TNFCYLPSSSSLKIVCT 73 (740)
Q Consensus 31 ~~~~~~l~~~k~~~~-~~-~~l~~W~~~--~~~C~~~~~~~~~v~C~ 73 (740)
++|++||++||+++. +| ..+.+|+.+ ++||.|.| |+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~G-----V~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSG-----VTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTT-----EEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeecc-----EEeC
Confidence 579999999999997 45 589999986 79999985 9995
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.6e-08 Score=88.78 Aligned_cols=131 Identities=18% Similarity=0.165 Sum_probs=80.5
Q ss_pred CCcEeecccccCccCCCccccCC---CCCCEEEcccCcCccccCcccCCC-CCCCeeeccCccCcccCCCCCCCCCCCEE
Q 004637 125 NLKVLSLVSLGLWGPLPSKINRF---WSLEVLNISSNFIYGEIPMEITSL-KNLKSIVLADNLLNGSVPDLQRLVLLEEL 200 (740)
Q Consensus 125 ~L~~L~L~~n~l~~~~p~~~~~l---~~L~~L~Ls~N~l~g~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~l~~L~~L 200 (740)
.+..++|+++++ +.+++....+ ..|+..+|++|.|. .+|+.|... +.++.|+|++|.|+..|.++..++.|+.|
T Consensus 28 E~h~ldLssc~l-m~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQL-MYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSL 105 (177)
T ss_pred Hhhhcccccchh-hHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhc
Confidence 456677777777 6666554443 34555578888877 666666543 46777888888887777777778888888
Q ss_pred ECCCCCCCCCCcCC--CCCCcEEEcccCcCcccCCccccCCCCCcEEEccCCccccccch
Q 004637 201 NLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS 258 (740)
Q Consensus 201 ~L~~N~l~~~~p~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 258 (740)
+++.|.|...+--. +.++-.|+..+|.+. ++|-.+.--+.+-..++.+|.+.+.-|.
T Consensus 106 Nl~~N~l~~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 106 NLRFNPLNAEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred ccccCccccchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcc
Confidence 88888775332211 356666777777765 5554432222223334455556554443
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.1e-06 Score=85.00 Aligned_cols=110 Identities=23% Similarity=0.275 Sum_probs=81.6
Q ss_pred hhHHHHHHHHHhhccCc--ccceeeceeeeeccCCCCCCCceEEEEecccCc-chhhhcccccCCCCCCHHHHHHHHHHH
Q 004637 491 PQSLMQHVELLSKLRHR--HLVSILGHCILTYQDHPNTGSTVFLVLEHISNG-SLRDYLTDWKKKDMLKWPQRMAIIIGA 567 (740)
Q Consensus 491 ~~~~~~Ei~il~~l~H~--nIv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i 567 (740)
.....+|...+.+++.. .+.+.+++...... .....++|+|++++- +|.+++... ...+......++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~----~~~~s~lite~l~~~~~L~~~~~~~---~~~~~~~~~~ll~~l 127 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKG----GGYRSYLITEALPGAQDLRDLLQQW---EQLDPSQRRELLRAL 127 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCC----CceeEEEEEEeCCCcccHHHHHHhh---cccchhhHHHHHHHH
Confidence 34678888888887533 24445555432111 113468999999874 799988532 125566778899999
Q ss_pred HHHHHHHHcCCCCCceecCCCCCceeecCCC---ceeEecCCCCCC
Q 004637 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKAL---TAKLSGYNIPLP 610 (740)
Q Consensus 568 a~gL~yLH~~~~~~iiHrDlKp~NILld~~~---~~kl~DFGla~~ 610 (740)
++.++-||. .||+|+|+++.|||++.+. .+.++||+-++.
T Consensus 128 ~~~i~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 128 ARLIAKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999999999 7999999999999999887 899999987643
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.7e-06 Score=94.50 Aligned_cols=138 Identities=18% Similarity=0.148 Sum_probs=88.4
Q ss_pred CeeecCCCccEEEEEecCCCEEEEEEeeccccc--------------------------C--------------hhHHHH
Q 004637 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--------------------------L--------------PQSLMQ 496 (740)
Q Consensus 457 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--------------------------~--------------~~~~~~ 496 (740)
+.|+.++-|.||+|++++|+.||||+.+..-.. . +-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 689999999999999999999999998642110 0 012445
Q ss_pred HHHHHhhcc-----CcccceeeceeeeeccCCCCCCCceEEEEecccCcchhhhcccccCCCCCCHHHHHHHHHHHHHH-
Q 004637 497 HVELLSKLR-----HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG- 570 (740)
Q Consensus 497 Ei~il~~l~-----H~nIv~l~g~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~g- 570 (740)
|..-+.+++ .++ +++=..|+. -.....|+|||++|-.+.+...- +....+. ..++..++++
T Consensus 211 EA~n~~~~~~nf~~~~~-v~VP~V~we-------~t~~~VLtmE~i~Gi~i~d~~~l--~~~g~d~---k~ia~~~~~~f 277 (517)
T COG0661 211 EAANAERFRENFKDDPD-VYVPKVYWE-------YTTRRVLTMEWIDGIKISDIAAL--KSAGIDR---KELAELLVRAF 277 (517)
T ss_pred HHHHHHHHHHHcCCCCC-eEeceeehh-------ccCCcEEEEEeeCCEecccHHHH--HhcCCCH---HHHHHHHHHHH
Confidence 555555553 222 222222221 12336899999999888887421 1122442 2333333332
Q ss_pred HHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCC
Q 004637 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 571 L~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~ 610 (740)
+..+-. .+++|.|.+|.||+++.+++.-+.|||+...
T Consensus 278 ~~q~~~---dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~ 314 (517)
T COG0661 278 LRQLLR---DGFFHADPHPGNILVRSDGRIVLLDFGIVGR 314 (517)
T ss_pred HHHHHh---cCccccCCCccceEEecCCcEEEEcCcceec
Confidence 111112 3899999999999999999999999999743
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=6.9e-06 Score=79.81 Aligned_cols=141 Identities=11% Similarity=0.068 Sum_probs=100.9
Q ss_pred ecCCCccEEEEEecCCCEEEEEEeecc---c---ccChhHHHHHHHHHhhccCcc--cceeeceeeeeccCCCCCCCceE
Q 004637 460 GEGSQGQLYKGFLTDGSRVSVKCLKLK---Q---RHLPQSLMQHVELLSKLRHRH--LVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 460 G~G~fg~Vy~~~~~~g~~vAvK~l~~~---~---~~~~~~~~~Ei~il~~l~H~n--Iv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
|+||-+.||+..++ |+.+-+|+-... . ......|.+|...+.++...+ +.+.. ++.... ......-+
T Consensus 27 ~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k---~~~~~rA~ 101 (216)
T PRK09902 27 RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVK---IEGEWRAL 101 (216)
T ss_pred CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeec---cCCceEEE
Confidence 67889999998775 446778876411 1 224578999999999986322 44443 322111 11234468
Q ss_pred EEEecccC-cchhhhcccccCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceecCCCCCceeecCCCc--eeEecCCCC
Q 004637 532 LVLEHISN-GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT--AKLSGYNIP 608 (740)
Q Consensus 532 lV~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~--~kl~DFGla 608 (740)
||+|-+++ -+|.+++.+. ...+.+...+..+..++++.++-||+ .++.|+|+-+.||+++.++. ++++||--+
T Consensus 102 LVTe~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~ 177 (216)
T PRK09902 102 LVTEDMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKS 177 (216)
T ss_pred EEEEeCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence 99997763 4888888542 23345777788999999999999999 79999999999999986666 999999765
Q ss_pred C
Q 004637 609 L 609 (740)
Q Consensus 609 ~ 609 (740)
+
T Consensus 178 r 178 (216)
T PRK09902 178 R 178 (216)
T ss_pred c
Confidence 3
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.1e-08 Score=111.77 Aligned_cols=125 Identities=30% Similarity=0.351 Sum_probs=99.3
Q ss_pred CCCCEEEcccCcCccccCcccCCCCCCCeeeccCccCcccCCCCCCCCCCCEEECCCCCCCCCCcCC---CCCCcEEEcc
Q 004637 148 WSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILR 224 (740)
Q Consensus 148 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~L~~L~l~ 224 (740)
..|.+.+.++|.|. ..-.++.-++.|+.|+|++|+++..- .+..|+.|++|||++|+|.- +|.. ...|+.|.++
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc~L~~L~lr 240 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRH-VPQLSMVGCKLQLLNLR 240 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhcc-ccccchhhhhheeeeec
Confidence 36778889999998 77777777889999999999998654 68889999999999999853 3432 2459999999
Q ss_pred cCcCcccCCccccCCCCCcEEEccCCcccccc-chhhccCCCccEEeccccccc
Q 004637 225 NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI-QSFLFSLPSILYLNLAGNQLS 277 (740)
Q Consensus 225 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~ 277 (740)
+|.++.. ..+.+|.+|+.||++.|-|++.- -..+..|..|..|+|.+|.+-
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 9999743 35788999999999999987532 123566788899999999885
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.5e-07 Score=102.15 Aligned_cols=139 Identities=22% Similarity=0.296 Sum_probs=90.6
Q ss_pred HHHHHHHHHHcCCCCCceecCCCCCceeecCCCceeEecCCCCCCCCCCCC------------------CccccccccCC
Q 004637 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLE------------------SPLRGQYVSNQ 627 (740)
Q Consensus 566 ~ia~gL~yLH~~~~~~iiHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~------------------~~~~~~~~~~~ 627 (740)
+++.|+.|+|.. .++||++|.|++|.+++.+..||+.|+.+.....+.. .+.++|+...
T Consensus 107 ~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~- 183 (700)
T KOG2137|consen 107 NVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG- 183 (700)
T ss_pred cccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-
Confidence 344899999985 8999999999999999999999999998643322111 1233444432
Q ss_pred CCCCCccceehhhHHHHHHH-hCCCCCCCCccchhHHHHHHhhhcCCcccccccCccccCCCcHHHHHHHHHHHHhcccc
Q 004637 628 PGDGAKEDVYQLGVILLQVI-TGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSK 706 (740)
Q Consensus 628 ~~~~~ksDVwSfGvil~Ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~li~~cl~~ 706 (740)
...+.++|+||+||++|-+. .|+.-+.......... ........ -...+..+.+.++.+=+.+.+..
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~-~~~~~~~~-----------~~~~~s~~~p~el~~~l~k~l~~ 251 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS-FSRNLLNA-----------GAFGYSNNLPSELRESLKKLLNG 251 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhh-hhhccccc-----------ccccccccCcHHHHHHHHHHhcC
Confidence 33478999999999999999 5555454332221111 11111110 01111233345566778889999
Q ss_pred CCCCCCCHHHHHH
Q 004637 707 DAAKRPSIEDVLW 719 (740)
Q Consensus 707 dP~~RPs~~evl~ 719 (740)
++..||++.++..
T Consensus 252 ~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 252 DSAVRPTLDLLLS 264 (700)
T ss_pred CcccCcchhhhhc
Confidence 9999998887654
|
|
| >PRK15386 type III secretion protein GogB; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.5e-06 Score=90.82 Aligned_cols=136 Identities=14% Similarity=0.205 Sum_probs=76.0
Q ss_pred hcCCCCCcEeecccccCccCCCccccCCCCCCEEEccc-CcCccccCcccCCCCCCCeeeccCc-cCcccCCCCCCCCCC
Q 004637 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISS-NFIYGEIPMEITSLKNLKSIVLADN-LLNGSVPDLQRLVLL 197 (740)
Q Consensus 120 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~L~~N-~l~~~~~~~~~l~~L 197 (740)
+..+.+++.|++++|.+ ..+| .+ ..+|+.|++++ +.++ .+|..+. ++|+.|++++| .+...++ .|
T Consensus 48 ~~~~~~l~~L~Is~c~L-~sLP-~L--P~sLtsL~Lsnc~nLt-sLP~~LP--~nLe~L~Ls~Cs~L~sLP~------sL 114 (426)
T PRK15386 48 IEEARASGRLYIKDCDI-ESLP-VL--PNELTEITIENCNNLT-TLPGSIP--EGLEKLTVCHCPEISGLPE------SV 114 (426)
T ss_pred HHHhcCCCEEEeCCCCC-cccC-CC--CCCCcEEEccCCCCcc-cCCchhh--hhhhheEccCccccccccc------cc
Confidence 55578888999998877 4556 22 23689999987 4554 7776552 57888888887 5554332 46
Q ss_pred CEEECCCCCCCCCCcCCCCCCcEEEcccCcCc--ccCCccccCCCCCcEEEccCCccccccchhhccCCCccEEecccc
Q 004637 198 EELNLGGNDFGPKFPSLSKNIVSVILRNNSLR--SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274 (740)
Q Consensus 198 ~~L~L~~N~l~~~~p~~~~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 274 (740)
+.|+++.|.+. .++..+.+|+.|.+.+++.. ..+|..+ -++|++|++++|... .+|..+. .+|+.|+++.|
T Consensus 115 e~L~L~~n~~~-~L~~LPssLk~L~I~~~n~~~~~~lp~~L--PsSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ls~n 187 (426)
T PRK15386 115 RSLEIKGSATD-SIKNVPNGLTSLSINSYNPENQARIDNLI--SPSLKTLSLTGCSNI-ILPEKLP--ESLQSITLHIE 187 (426)
T ss_pred ceEEeCCCCCc-ccccCcchHhheecccccccccccccccc--CCcccEEEecCCCcc-cCccccc--ccCcEEEeccc
Confidence 77777766553 23344445566665432211 0111110 135666666665544 2232222 35555555544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 740 | ||||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 4e-32 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 4e-32 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 3e-26 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 7e-26 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-22 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-22 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 2e-22 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 8e-21 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 7e-12 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 3e-11 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 4e-11 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 6e-09 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 7e-09 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 1e-08 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 1e-08 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 1e-08 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 1e-08 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 1e-08 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 2e-08 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 2e-08 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 2e-08 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 3e-08 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 4e-08 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 4e-08 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 4e-08 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 4e-08 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 4e-08 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 5e-08 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 7e-08 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 8e-08 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 2e-07 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 2e-07 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-07 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-07 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 3e-07 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 3e-07 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 3e-07 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 4e-07 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 5e-07 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 5e-07 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 5e-07 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 8e-07 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 1e-06 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 1e-06 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 1e-06 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 1e-06 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 1e-06 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 1e-06 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 1e-06 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 1e-06 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 1e-06 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 2e-06 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 2e-06 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-06 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 2e-06 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-06 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-06 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-06 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 2e-06 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 2e-06 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 2e-06 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 2e-06 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 2e-06 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 3e-06 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 3e-06 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 3e-06 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 3e-06 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-06 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 3e-06 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 3e-06 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 3e-06 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 4e-06 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 4e-06 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 5e-06 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 5e-06 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 6e-06 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 7e-06 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 7e-06 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 7e-06 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 7e-06 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 8e-06 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 8e-06 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 9e-06 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 9e-06 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 1e-05 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 1e-05 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 1e-05 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 1e-05 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-05 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 1e-05 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 1e-05 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 2e-05 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 2e-05 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 2e-05 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 2e-05 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-05 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 2e-05 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 3e-05 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 3e-05 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 3e-05 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-05 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 3e-05 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-05 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 3e-05 | ||
| 2qlu_A | 314 | Crystal Structure Of Activin Receptor Type Ii Kinas | 4e-05 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 4e-05 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 5e-05 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 6e-05 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 6e-05 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 6e-05 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 7e-05 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 8e-05 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 8e-05 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 8e-05 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 8e-05 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 9e-05 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 1e-04 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 1e-04 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 1e-04 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 1e-04 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 1e-04 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 1e-04 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 1e-04 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-04 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-04 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-04 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 2e-04 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 2e-04 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 2e-04 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 2e-04 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 2e-04 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-04 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 2e-04 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-04 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-04 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 2e-04 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 2e-04 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-04 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 2e-04 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 2e-04 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 2e-04 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 2e-04 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 2e-04 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 2e-04 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 2e-04 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-04 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 2e-04 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-04 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-04 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 2e-04 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 2e-04 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 2e-04 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 2e-04 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-04 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 2e-04 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 2e-04 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 2e-04 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 2e-04 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 3e-04 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-04 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 3e-04 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-04 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 3e-04 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 3e-04 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 3e-04 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-04 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 3e-04 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 4e-04 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 4e-04 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 4e-04 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 4e-04 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 4e-04 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 4e-04 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 4e-04 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 4e-04 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 4e-04 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 4e-04 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 4e-04 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 5e-04 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 5e-04 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 5e-04 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 5e-04 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 5e-04 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 5e-04 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 5e-04 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 5e-04 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 5e-04 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 5e-04 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 5e-04 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 5e-04 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 5e-04 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 5e-04 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 5e-04 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 5e-04 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 5e-04 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 6e-04 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 6e-04 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 6e-04 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 6e-04 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 6e-04 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 6e-04 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 6e-04 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 6e-04 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 6e-04 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 6e-04 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 6e-04 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 6e-04 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 7e-04 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 7e-04 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 7e-04 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 7e-04 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 8e-04 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 8e-04 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 8e-04 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 8e-04 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 8e-04 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 8e-04 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 9e-04 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 9e-04 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 9e-04 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 9e-04 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 9e-04 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 9e-04 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 9e-04 |
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 217 bits (554), Expect = 8e-65
Identities = 99/331 (29%), Positives = 157/331 (47%), Gaps = 43/331 (12%)
Query: 421 SRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSV 480
+ + + S+ + L ++EEATNNFD LIG G G++YKG L DG++V++
Sbjct: 9 TNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVAL 68
Query: 481 KCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNG 540
K + + +E LS RH HLVS++G C + + L+ +++ NG
Sbjct: 69 KRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD--------ERNEMILIYKYMENG 120
Query: 541 SLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599
+L+ +L + W QR+ I IGA RG+ +LHT I ++K+ NILLD+
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFV 177
Query: 600 AKLSGYNIPLPSKKGLESPLRGQYVSNQ----PGDGA-----------KEDVYQLGVILL 644
K++ + I SKKG E L ++S G K DVY GV+L
Sbjct: 178 PKITDFGI---SKKGTE--LDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLF 232
Query: 645 QVITGKQVKSTSEVDGLKLQLETCLAE------APSKLRAEADPSVRGTYAYDSLRTTVE 698
+V+ + S LAE +L DP++ +SLR +
Sbjct: 233 EVLCARSAIVQSLPRE-----MVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGD 287
Query: 699 ITINCLSKDAAKRPSIEDVLWNLQYSIQVQE 729
+ CL+ + RPS+ DVLW L+Y++++QE
Sbjct: 288 TAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 6e-51
Identities = 84/312 (26%), Positives = 142/312 (45%), Gaps = 58/312 (18%)
Query: 439 RGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKL--KQRHLPQSLMQ 496
+ FSL E++ A++NF N++G G G++YKG L DG+ V+VK LK Q Q +
Sbjct: 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTE 77
Query: 497 HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-KDML 555
VE++S HR+L+ + G C+ T + LV +++NGS+ L + + + L
Sbjct: 78 -VEMISMAVHRNLLRLRGFCM--------TPTERLLVYPYMANGSVASCLRERPESQPPL 128
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS------------ 603
WP+R I +G+ RG+ +LH P I ++K NILLD+ A +
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 188
Query: 604 -----------GYNIPLPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQV 652
G+ P E G+ S K DV+ GV+LL++ITG
Sbjct: 189 THVTTAVRGTIGHIAP-------EYLSTGK-SS------EKTDVFGYGVMLLELITG--- 231
Query: 653 KSTSEVDGLKLQLETCLAEAPSKLRAE------ADPSVRGTYAYDSLRTTVEITINCLSK 706
+ ++ L + L + L E D ++G Y + + +++ + C
Sbjct: 232 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 291
Query: 707 DAAKRPSIEDVL 718
+RP + +V+
Sbjct: 292 SPMERPKMSEVV 303
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 2e-49
Identities = 90/331 (27%), Positives = 136/331 (41%), Gaps = 66/331 (19%)
Query: 429 RSAAIGLPPFRGFSLEEIEEATNNFDP------TNLIGEGSQGQLYKGFLTDGSRVSVKC 482
+S + F FS E++ TNNFD N +GEG G +YKG++ + + V+VK
Sbjct: 3 KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVK- 60
Query: 483 LKLKQRHLPQSL------MQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEH 536
KL + Q +++++K +H +LV +LG G + LV +
Sbjct: 61 -KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS--------DGDDLCLVYVY 111
Query: 537 ISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596
+ NGSL D L+ L W R I GA G+ FLH I ++K+ NILLD+
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--HHIH-RDIKSANILLDE 168
Query: 597 ALTAKLS------------------------GYNIPLPSKKGLESPLRGQYVSNQPGDGA 632
A TAK+S Y P E+ LRG+
Sbjct: 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAP-------EA-LRGEIT-------P 213
Query: 633 KEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDS 692
K D+Y GV+LL++ITG L L ++ + + + D + S
Sbjct: 214 KSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTS 272
Query: 693 LRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723
+ + CL + KRP I+ V LQ
Sbjct: 273 VEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 9e-41
Identities = 59/317 (18%), Positives = 115/317 (36%), Gaps = 47/317 (14%)
Query: 439 RGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM--Q 496
E + + + G G ++K L V+VK ++ + QS
Sbjct: 12 VDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDK---QSWQNEY 67
Query: 497 HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLK 556
V L ++H +++ +G + ++L+ GSL D+L K +++
Sbjct: 68 EVYSLPGMKHENILQFIGAEK----RGTSVDVDLWLITAFHEKGSLSDFL----KANVVS 119
Query: 557 WPQRMAIIIGATRGVQFLHTGVAPGIFGNN-------LKTENILLDKALTAKLS--GYNI 607
W + I RG+ +LH + G+ +K++N+LL LTA ++ G +
Sbjct: 120 WNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179
Query: 608 PLPSKKGLE------------SP--LRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVK 653
+ K +P L G + + D+Y +G++L ++ +
Sbjct: 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAF-LRIDMYAMGLVLWELASRCTA- 237
Query: 654 STSEVDGLKLQLETCLAEAPSK-------LRAEADPSVRGTYAYDS-LRTTVEITINCLS 705
+ VD L E + + PS + + P +R + + + E C
Sbjct: 238 ADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWD 297
Query: 706 KDAAKRPSIEDVLWNLQ 722
DA R S V +
Sbjct: 298 HDAEARLSAGCVGERIT 314
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 9e-36
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 8/201 (3%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
+++ NL+ L + S +P + +L+ L+IS N + G+ I++ LK + +
Sbjct: 196 VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 254
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILRNNSLRSEIPSG 235
+ N G +P L L+ L+L N F + P + + L N +P
Sbjct: 255 SSNQFVGPIPP-LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF 313
Query: 236 LKNFDQLKQFDISSNNFVGPI-QSFLFSLPSILYLNLAGNQLSEALPVNIS-CSAKLNFV 293
+ L+ +SSNNF G + L + + L+L+ N+ S LP +++ SA L +
Sbjct: 314 FGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTL 373
Query: 294 EISHNLLIGKLPSCIGSNSLN 314
++S N G + + N N
Sbjct: 374 DLSSNNFSGPILPNLCQNPKN 394
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 4e-34
Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 8/230 (3%)
Query: 93 PKPTFGKFSASQQ-SLSANFNIDRFFTILTKLS-NLKVLSLVSLGLWGPLPSKINRFW-- 148
P T K + LS N LT LS +L L L S GP+ + +
Sbjct: 335 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 394
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP-DLQRLVLLEELNLGGNDF 207
+L+ L + +N G+IP +++ L S+ L+ N L+G++P L L L +L L N
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 454
Query: 208 GPKFPS---LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLP 264
+ P K + ++IL N L EIPSGL N L +S+N G I ++ L
Sbjct: 455 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLE 514
Query: 265 SILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLN 314
++ L L+ N S +P + L +++++ NL G +P+ + S
Sbjct: 515 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 564
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 8e-33
Identities = 75/315 (23%), Positives = 126/315 (40%), Gaps = 42/315 (13%)
Query: 30 TPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNK-SS 88
E L + +L +L W+ N C + C + +VT + + +
Sbjct: 10 LYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDG-----VTCRDDKVTSIDLSSKPLNV 64
Query: 89 PAHSPKPTFGKFSASQQ-SLSANF---NIDRF----------------------FTILTK 122
+ + + + LS + ++ F T L
Sbjct: 65 GFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGS 124
Query: 123 LSNLKVLSLVSLGLWGPLP-SKINRFWSLEVLNISSNFIYGEIPMEIT---SLKNLKSIV 178
S LK L++ S L P S + SLEVL++S+N I G + LK +
Sbjct: 125 CSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLA 184
Query: 179 LADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSGL 236
++ N ++G V + R V LE L++ N+F P L + + + N L + +
Sbjct: 185 ISGNKISGDVD-VSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAI 243
Query: 237 KNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS-AKLNFVEI 295
+LK +ISSN FVGPI L S+ YL+LA N+ + +P +S + L +++
Sbjct: 244 STCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDL 301
Query: 296 SHNLLIGKLPSCIGS 310
S N G +P GS
Sbjct: 302 SGNHFYGAVPPFFGS 316
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 8e-33
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPME-ITSLKNLKSI 177
+ L L L +G +P LE L +SSN GE+PM+ + ++ LK +
Sbjct: 289 LSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVL 348
Query: 178 VLADNLLNGSVPD--LQRLVLLEELNLGGNDF-GPKFPSLSK----NIVSVILRNNSLRS 230
L+ N +G +P+ L L+L N+F GP P+L + + + L+NN
Sbjct: 349 DLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTG 408
Query: 231 EIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKL 290
+IP L N +L +S N G I S L SL + L L N L +P + L
Sbjct: 409 KIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTL 468
Query: 291 NFVEISHNLLIGKLPSCIGSNS 312
+ + N L G++PS + + +
Sbjct: 469 ETLILDFNDLTGEIPSGLSNCT 490
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 7e-30
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 10/213 (4%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L+ +NL +SL + L G +P I R +L +L +S+N G IP E+ ++L + L
Sbjct: 486 LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 545
Query: 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRN-NSLRSEIPSGLK 237
NL NG++P + + N + N + L
Sbjct: 546 NTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLN 605
Query: 238 NFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297
+I+S + G + S+++L+++ N LS +P I L + + H
Sbjct: 606 RLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGH 665
Query: 298 NLLIGKLPSCIGS----NSLNRTVVSTWNCLSG 326
N + G +P +G N L+ +S N L G
Sbjct: 666 NDISGSIPDEVGDLRGLNILD---LS-SNKLDG 694
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 6e-24
Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 26/213 (12%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP-------------- 165
+ +L NL +L L + G +P+++ SL L++++N G IP
Sbjct: 510 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569
Query: 166 ------MEITSLKNLKSIVLADNLLN--GSVP-DLQRLVLLEELNLGGNDFGPKFPSLSK 216
+ I + K A NLL G L RL N+ +G
Sbjct: 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 629
Query: 217 NIVSVI---LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAG 273
N S++ + N L IP + + L ++ N+ G I + L + L+L+
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689
Query: 274 NQLSEALPVNISCSAKLNFVEISHNLLIGKLPS 306
N+L +P +S L +++S+N L G +P
Sbjct: 690 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-22
Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 12/187 (6%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG 208
S+++ + N + + + SL L+S+ L+++ +NGSV + L L+L N
Sbjct: 54 SIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLS 113
Query: 209 PKFPSLS-----KNIVSVILRNNSLRSEIP-SGLKNFDQLKQFDISSNNFVGPIQSFLF- 261
+L+ + + + +N+L SG + L+ D+S+N+ G
Sbjct: 114 GPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVL 173
Query: 262 --SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVS 319
+ +L ++GN++S + +S L F+++S N +P ++L +S
Sbjct: 174 SDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDIS 231
Query: 320 TWNCLSG 326
N LSG
Sbjct: 232 -GNKLSG 237
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 4e-08
Identities = 22/87 (25%), Positives = 44/87 (50%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
+ + L +L+L + G +P ++ L +L++SSN + G IP +++L L I L
Sbjct: 652 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGND 206
++N L+G +P++ + N
Sbjct: 712 SNNNLSGPIPEMGQFETFPPAKFLNNP 738
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 3e-35
Identities = 63/311 (20%), Positives = 119/311 (38%), Gaps = 24/311 (7%)
Query: 31 PSETRILFQVQKLLEYPEVLQGWTDWTNFCY------LPSSSSLKIVCTNSRVTELTVIG 84
P + + L Q++K L P L W T+ C L + + RV L + G
Sbjct: 5 PQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDT-----QTYRVNNLDLSG 59
Query: 85 NKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFT--I---LTKLSNLKVLSLVSLGLWGP 139
+ + N I + KL+ L L + + G
Sbjct: 60 LNLPKPYPIPSSLANLPYLNFLYIGGIN---NLVGPIPPAIAKLTQLHYLYITHTNVSGA 116
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLV-LL 197
+P +++ +L L+ S N + G +P I+SL NL I N ++G++PD L
Sbjct: 117 IPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLF 176
Query: 198 EELNLGGNDF-GPKFPSLSK-NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGP 255
+ + N G P+ + N+ V L N L + + ++ ++ N+
Sbjct: 177 TSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236
Query: 256 IQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNR 315
+ + ++ L+L N++ LP ++ L+ + +S N L G++P +
Sbjct: 237 L-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDV 295
Query: 316 TVVSTWNCLSG 326
+ + CL G
Sbjct: 296 SAYANNKCLCG 306
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 3e-32
Identities = 68/344 (19%), Positives = 123/344 (35%), Gaps = 63/344 (18%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQ--HV 498
+ E +N LIG G G +YKG L D V+VK R Q+ + ++
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNI 58
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
+ + H ++ + D LV+E+ NGSL YL W
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRME---YLLVMEYYPNGSLXKYL----SLHTSDWV 111
Query: 559 QRMAIIIGATRGVQFLHTGVA------PGIFGNNLKTENILLDKALTAKLS--GYNIPLP 610
+ TRG+ +LHT + P I +L + N+L+ T +S G ++ L
Sbjct: 112 SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171
Query: 611 SKKGLESPLRGQYVSNQPG----------DGA-----------KEDVYQLGVILLQVITG 649
+ + ++ G +GA + D+Y LG+I ++
Sbjct: 172 GNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231
Query: 650 KQVKSTSE-VDGLKLQLETCLAEAPS-----------KLRAEADPSVRGTYAYDS--LRT 695
E V ++ +T + P+ K R P + +S +R+
Sbjct: 232 CTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQR----PKFPEAWKENSLAVRS 287
Query: 696 TVEITINCLSKDAAKRPS---IEDVLWNLQYSIQVQEGWTSSGN 736
E +C +DA R + E+ + L + + + + +
Sbjct: 288 LKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPTAH 331
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 8e-26
Identities = 59/299 (19%), Positives = 113/299 (37%), Gaps = 58/299 (19%)
Query: 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELL 501
SL I+ + ++G G+ G + K V++K +++ ++ + + L
Sbjct: 1 SLHMIDY--KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIK--QIESESERKAFIVELRQL 55
Query: 502 SKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
S++ H ++V + G C+ LV+E+ GSL + L + M
Sbjct: 56 SRVNHPNIVKLYGACLNPV----------CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM 105
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT-AKLS--G----YNIPLPSKKG 614
+ + ++GV +LH+ + +LK N+LL T K+ G + + KG
Sbjct: 106 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG 165
Query: 615 LESP-------LRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLET 667
S G S K DV+ G+IL +VIT ++ D +
Sbjct: 166 --SAAWMAPEVFEGSNYSE------KCDVFSWGIILWEVITRRK-----PFDEIGGPAFR 212
Query: 668 CLAEAPSKLR----AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
+ + R + + C SKD ++RPS+E+++ +
Sbjct: 213 IMWAVHNGTRPPLIKNLPKPIE------------SLMTRCWSKDPSQRPSMEEIVKIMT 259
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 1e-25
Identities = 50/302 (16%), Positives = 106/302 (35%), Gaps = 53/302 (17%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM-QHVELLSKLRHRHLVSILGH 515
+G+G G++++G G V+VK R + LRH +++ +
Sbjct: 14 ECVGKGRYGEVWRGSW-QGENVAVK--IFSSRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
+ + ++L+ + GSL DYL + L + I++ G+ LH
Sbjct: 71 DMTSRHSSTQ----LWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 576 TGVA-----PGIFGNNLKTENILLDKALTAKL-----------SGYNIPLPSKKGLESP- 618
+ P I +LK++NIL+ K + S + + + + +
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 619 ------LRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672
L + + D++ G++L +V + S V+ K +
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR--MVSNGIVEDYKPPFYDVVPND 240
Query: 673 PS-----------KLRAEADPSVRGTYAYDS-LRTTVEITINCLSKDAAKRPSIEDVLWN 720
PS + R P++ + D L + ++ C ++ + R + +
Sbjct: 241 PSFEDMRKVVCVDQQR----PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKT 296
Query: 721 LQ 722
L
Sbjct: 297 LT 298
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-25
Identities = 69/290 (23%), Positives = 117/290 (40%), Gaps = 66/290 (22%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHC 516
IG GS G +++ GS V+VK L + H ++ V ++ +LRH ++V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
PN + +V E++S GSL L ++ L +R+++ +G+ +LH
Sbjct: 104 T----QPPN----LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLS--G-----YNIPLPSKKGLESP-------LRGQ 622
P I NLK+ N+L+DK T K+ G + L SK +P LR +
Sbjct: 156 R-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 623 YVSNQPGDGAKEDVYQLGVILLQVITGK---------QVKSTSEVDGLKLQL-ETCLAEA 672
+ K DVY GVIL ++ T + QV + +L++
Sbjct: 215 PSNE------KSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNL---- 264
Query: 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
++ I C + + KRPS ++ L+
Sbjct: 265 NPQVA--------------------AIIEGCWTNEPWKRPSFATIMDLLR 294
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 3e-25
Identities = 52/287 (18%), Positives = 110/287 (38%), Gaps = 61/287 (21%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQH----VELLSKLRHRHLVSILG 514
+ E G+L+KG G+ + VK LK R + L H +++ +LG
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVK--VLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
C H L+ + GSL + L + ++ Q + + RG+ FL
Sbjct: 75 ACQSPPAPH------PTLITHWMPYGSLYNVLHE-GTNFVVDQSQAVKFALDMARGMAFL 127
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLESP-------LRGQYVS 625
HT + P I + L + ++++D+ +TA++S S + +P L+ +
Sbjct: 128 HT-LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPED 186
Query: 626 NQPGDGAKEDVYQLGVILLQVITGK---------QVKSTSEVDGLKLQL-ETCLAEAPSK 675
+ D++ V+L +++T + ++ ++GL+ +
Sbjct: 187 T---NRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGI----SPH 239
Query: 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
+ ++ C+++D AKRP + ++ L+
Sbjct: 240 VS--------------------KLMKICMNEDPAKRPKFDMIVPILE 266
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 66/312 (21%), Positives = 114/312 (36%), Gaps = 58/312 (18%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVE--LLSKLRHRHLVSILG 514
IG+G G+++ G G +V+VK + S + E +RH +++ +
Sbjct: 43 KQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIA 98
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
I + + ++L+ ++ NGSL DYL K L + + + G+ L
Sbjct: 99 ADI----KGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHL 150
Query: 575 HTGVA-----PGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLE----------- 616
HT + P I +LK++NIL+ K T ++ G + S
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTK 210
Query: 617 ---SP--LRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE 671
P L N D+Y G+IL +V V+ +L +
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVS--GGIVEEYQLPYHDLVPS 268
Query: 672 APS-----------KLRAEADPSVRGTYAYDS-LRTTVEITINCLSKDAAKRPSIEDV-- 717
PS KLR PS ++ D LR ++ C + + A R + V
Sbjct: 269 DPSYEDMREIVCIKKLR----PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK 324
Query: 718 -LWNLQYSIQVQ 728
L + S ++
Sbjct: 325 TLAKMSESQDIK 336
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 58/311 (18%), Positives = 109/311 (35%), Gaps = 54/311 (17%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM-QHVELLSKLRHRHLVSILGH 515
IG+G G++++G G V+VK R + LRH +++ +
Sbjct: 48 ESIGKGRFGEVWRGKW-RGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
T + ++LV ++ +GSL DYL + + + + + G+ LH
Sbjct: 105 DN----KDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLH 156
Query: 576 TGVA-----PGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLE------------ 616
+ P I +LK++NIL+ K T ++ G + S
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 216
Query: 617 --SP--LRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672
+P L + D+Y +G++ ++ + + +L +
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI--GGIHEDYQLPYYDLVPSD 274
Query: 673 PS-----------KLRAEADPSVRGTYAYDS-LRTTVEITINCLSKDAAKRPSIEDVLWN 720
PS KLR P++ + LR +I C + A R + +
Sbjct: 275 PSVEEMRKVVCEQKLR----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330
Query: 721 LQYSIQVQEGW 731
L + QEG
Sbjct: 331 LS-QLSQQEGI 340
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 60/290 (20%), Positives = 103/290 (35%), Gaps = 63/290 (21%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHC 516
IG GS G +YKG V+VK L + Q+ V +L K RH +++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
T + +V + SL +L + + + + I RG+ +LH
Sbjct: 90 ---------TAPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLH- 137
Query: 577 GVAPGIFGNNLKTENILLDKALTAK-----LSGYNIPLPSKKGLESPLRGQY-------V 624
A I +LK+ NI L + T K L+ E G +
Sbjct: 138 --AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL-SGSILWMAPEVI 194
Query: 625 SNQPGD--GAKEDVYQLGVILLQVITGK----------QVKSTSEVDGLKLQLETCLAEA 672
Q + + DVY G++L +++TG+ Q+ L L +
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC 254
Query: 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
P +++ + CL K +RPS +L ++
Sbjct: 255 PKRMK--------------------RLMAECLKKKRDERPSFPRILAEIE 284
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 3e-23
Identities = 66/328 (20%), Positives = 121/328 (36%), Gaps = 79/328 (24%)
Query: 431 AAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRH 489
A+G F L + + N + IG+G G ++KG + D S V++K L L
Sbjct: 1 GAMGGSEFPKSRLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE 58
Query: 490 -------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSL 542
Q + V ++S L H ++V + G + P +V+E + G L
Sbjct: 59 GETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH----NPPR------MVMEFVPCGDL 108
Query: 543 RDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA----- 597
L K +KW ++ +++ G++++ P I +L++ NI L
Sbjct: 109 YHRLL--DKAHPIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAP 165
Query: 598 LTAKLS--GY--NIPLPSKKGLESP-------LRGQYVSNQPGDGAKEDVYQLGVILLQV 646
+ AK++ G L + + + + K D Y +IL +
Sbjct: 166 VCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAE---EESYT-EKADTYSFAMILYTI 221
Query: 647 ITGK---------QVKSTSEV--DGLKLQL-ETCLAEAPSKLRAEADPSVRGTYAYDSLR 694
+TG+ ++K + + +GL+ + E C P +LR
Sbjct: 222 LTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDC----PPRLR----------------- 260
Query: 695 TTVEITINCLSKDAAKRPSIEDVLWNLQ 722
+ C S D KRP ++ L
Sbjct: 261 ---NVIELCWSGDPKKRPHFSYIVKELS 285
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 1e-22
Identities = 59/298 (19%), Positives = 103/298 (34%), Gaps = 77/298 (25%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM----QHVELLSKLRHRHLVSILG 514
IG G G++Y+ F G V+VK + + Q +L + L+H +++++ G
Sbjct: 15 IGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
C+ PN + LV+E G L L + + + RG+ +L
Sbjct: 74 VCL----KEPN----LCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYL 121
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP---------LPSKKGLES-------- 617
H I +LK+ NIL+ + + I + S
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWM 181
Query: 618 -P--LRGQYVSNQPGDGAKEDVYQLGVILLQVITGK---------QVKSTSEVDGLKLQL 665
P +R S DV+ GV+L +++TG+ V ++ L L +
Sbjct: 182 APEVIRASMFSK------GSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI 235
Query: 666 -ETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
TC P ++ +C + D RPS ++L L
Sbjct: 236 PSTC----PEPFA--------------------KLMEDCWNPDPHSRPSFTNILDQLT 269
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 2e-22
Identities = 56/303 (18%), Positives = 105/303 (34%), Gaps = 64/303 (21%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH 506
F P++L +G+G GQ K G + +K L ++ ++ V+++ L H
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
+++ +G Y+D + + E+I G+LR + W QR++
Sbjct: 67 PNVLKFIGVL---YKDKR-----LNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKD 116
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS----------------GYNIPLP 610
G+ +LH + I +L + N L+ + ++ G
Sbjct: 117 IASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKK 173
Query: 611 SKKGLESPLRGQY-------VSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKL 663
+ + G ++ + D K DV+ G++L ++I D L
Sbjct: 174 PDRKKRYTVVGNPYWMAPEMINGRSYD-EKVDVFSFGIVLCEIIGRVNADP----DYLPR 228
Query: 664 QLETCLAEAPSKLRAEA----DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLW 719
++ L L PS IT+ C D KRPS +
Sbjct: 229 TMDFGLNVR-GFLDRYCPPNCPPSFF------------PITVRCCDLDPEKRPSFVKLEH 275
Query: 720 NLQ 722
L+
Sbjct: 276 WLE 278
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 98.4 bits (245), Expect = 3e-21
Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 24/230 (10%)
Query: 104 QQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG- 162
+ + + L +L + L + LP + L+ LNI+ N
Sbjct: 471 DANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISA 530
Query: 163 --------EIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGNDFGPKFP 212
+ + + ++ + N L LQ++V L L+ N
Sbjct: 531 AQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR-HLE 589
Query: 213 SLS--KNIVSVILRNNSLRSEIPSGL-KNFDQLKQFDISSNNFVG-PIQSFLFSLPSILY 268
+ + + L N + EIP DQ++ S N P S+ +
Sbjct: 590 AFGTNVKLTDLKLDYNQI-EEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGS 648
Query: 269 LNLAGNQLSEALPVNISCS------AKLNFVEISHNLLIGKLPSCIGSNS 312
++ + N++ NISCS + V +S+N + + S
Sbjct: 649 VDFSYNKIGS-EGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGS 697
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 89.9 bits (223), Expect = 1e-18
Identities = 30/211 (14%), Positives = 67/211 (31%), Gaps = 20/211 (9%)
Query: 117 FTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKS 176
FT + + + + + L + + + ++P + L L+S
Sbjct: 460 FTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519
Query: 177 IVLADNLLNGSV----------PDLQRLVLLEELNLGGNDFG--PKFPSLSK--NIVSVI 222
+ +A N + D ++ +G N+ P SL K + +
Sbjct: 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLD 579
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282
+N + + + +L + N + F + L + N+L +P
Sbjct: 580 CVHNKV-RHLEA-FGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKY-IPN 636
Query: 283 NISCS--AKLNFVEISHNLLIGKLPSCIGSN 311
+ + V+ S+N IG I +
Sbjct: 637 IFNAKSVYVMGSVDFSYN-KIGSEGRNISCS 666
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 81.8 bits (202), Expect = 4e-16
Identities = 28/201 (13%), Positives = 60/201 (29%), Gaps = 16/201 (7%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L + LSL G G +P I + L+VL+ ++ +
Sbjct: 319 LDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEE 378
Query: 180 ADNLLNGSVPD--------LQRLVLLEELNLGGNDFGPKFPS--LSKNIVSVILRNNSLR 229
+ + L LL++ + P +S + N +
Sbjct: 379 RKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRIT 438
Query: 230 SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAK 289
I ++ +L+ +++ F + N + E ++ S
Sbjct: 439 F-ISKAIQRLTKLQIIYFANSPFTYDNIAV-----DWEDANSDYAKQYENEELSWSNLKD 492
Query: 290 LNFVEISHNLLIGKLPSCIGS 310
L VE+ + + +LP +
Sbjct: 493 LTDVELYNCPNMTQLPDFLYD 513
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 81.5 bits (201), Expect = 5e-16
Identities = 32/222 (14%), Positives = 73/222 (32%), Gaps = 28/222 (12%)
Query: 120 LTKLSNLKVLSL-----VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNL 174
+ + + S G + + + +S N I + +
Sbjct: 640 AKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPI 699
Query: 175 KSIVLADNLL--------NGSVPDLQRLVLLEELNLGGNDFGPKFPSLS----KNIVSVI 222
+I+L++NL+ + + LL ++L N + ++
Sbjct: 700 STIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMD 759
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDI------SSNNFVGPIQSFLFSLPSILYLNLAGNQL 276
+ N S P+ N QLK F I N + + + + PS++ L + N +
Sbjct: 760 VSYNCF-SSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818
Query: 277 SEALPVNISCSAKLNFVEISHN-LLIGKLPSCIGSNSLNRTV 317
+ + + + +L ++I+ N + + S V
Sbjct: 819 RK-VDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYV 857
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 1e-15
Identities = 31/229 (13%), Positives = 66/229 (28%), Gaps = 31/229 (13%)
Query: 108 SANFNIDRFFTILTKLSNLKVL-----SLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG 162
+ R +++ +L P + + + L +L+ N +
Sbjct: 532 QLKADWTRLADDEDTGPKIQIFYMGYNNLEEF----PASASLQKMVKLGLLDCVHNKV-R 586
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFG--PKFPSLS--K 216
+ + L + L N + +P+ +E L N P +
Sbjct: 587 HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVY 644
Query: 217 NIVSVILRNNSLRSEIPSGLKNFD-----QLKQFDISSNNFVGPIQSFLFSLPSILYLNL 271
+ SV N + SE + + D +S N + I + L
Sbjct: 645 VMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIIL 704
Query: 272 AGNQLSE-------ALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313
+ N ++ N + L +++ N L L + +L
Sbjct: 705 SNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKL-TSLSDDFRATTL 752
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 4e-13
Identities = 24/179 (13%), Positives = 68/179 (37%), Gaps = 24/179 (13%)
Query: 119 ILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI--T 169
+ S + + L + P + L +++ N + + + T
Sbjct: 692 LFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKL-TSLSDDFRAT 750
Query: 170 SLKNLKSIVLADNLLN------GSVPDLQRLVLLEELNLGGNDFGPKFP-SLS--KNIVS 220
+L L ++ ++ N + + L+ + + + GN ++P ++ +++
Sbjct: 751 TLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQ 810
Query: 221 VILRNNSLRSEIPSGLKNFDQLKQFDISSN-NFVGPIQSFLFSLPSILYLNLAGNQLSE 278
+ + +N + ++ L QL DI+ N N + S + + +Y+ L ++ +
Sbjct: 811 LQIGSNDI-RKVDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYV-LLYDKTQD 865
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 3e-10
Identities = 31/190 (16%), Positives = 62/190 (32%), Gaps = 14/190 (7%)
Query: 137 WGPLPSKINRFWSLEVLNISS--NFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQR 193
W IN N + + + +++ + + + LA G VPD + +
Sbjct: 286 WRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQ 345
Query: 194 LVLLEELNLGGNDF---GPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQ------LKQ 244
L L+ L+ G + G F R + +R ++DQ L Q
Sbjct: 346 LTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQ 405
Query: 245 FDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKL 304
I+ N + PI+ + N+++ + I KL + +++
Sbjct: 406 DAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTY-D 463
Query: 305 PSCIGSNSLN 314
+ N
Sbjct: 464 NIAVDWEDAN 473
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 1e-04
Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 11/106 (10%)
Query: 107 LSANFNIDRFFTILTKLSNLKVLSLVSL------GLWGPLPSKINRFWSLEVLNISSNFI 160
+S N F T S LK + + P+ I SL L I SN I
Sbjct: 760 VSYN-CFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818
Query: 161 YGEIPMEITSLKNLKSIVLADN-LLNGSVPDLQRLVLLEELNLGGN 205
++ ++ L + +ADN ++ V + + L +
Sbjct: 819 -RKVDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYD 861
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 3e-21
Identities = 31/227 (13%), Positives = 78/227 (34%), Gaps = 22/227 (9%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFI---- 160
++ L +L + + + LP+ + ++++N++ N
Sbjct: 230 ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGE 289
Query: 161 ----YGEIPMEITSLKNLKSIVLADN-LLNGSVP-DLQRLVLLEELNLGGNDFGPKFPSL 214
+ + + ++ I + N L V LQ++ L L N K P+
Sbjct: 290 QLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPAF 349
Query: 215 SK--NIVSVILRNNSLRSEIPSGL-KNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLN 270
+ S+ L N + +EIP+ +Q++ + N P S+ + ++
Sbjct: 350 GSEIKLASLNLAYNQI-TEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAID 408
Query: 271 LAGNQLS-------EALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
+ N++ + L ++ + +S+N + +
Sbjct: 409 FSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFST 455
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 4e-21
Identities = 28/209 (13%), Positives = 71/209 (33%), Gaps = 17/209 (8%)
Query: 117 FTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKS 176
F + + + K + L + + + ++P + +L ++
Sbjct: 218 FVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277
Query: 177 IVLADNLLNG---------SVPDLQRLVLLEELNLGGNDF--GPKFPSLS--KNIVSVIL 223
I +A N ++ D ++ + +G N+ P SL K + +
Sbjct: 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLEC 337
Query: 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVN 283
N L ++P+ + +L +++ N +F + L+ A N+L +P
Sbjct: 338 LYNQLEGKLPA-FGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKY-IPNI 395
Query: 284 ISCS--AKLNFVEISHNLLIGKLPSCIGS 310
+ ++ ++ S+N +
Sbjct: 396 FDAKSVSVMSAIDFSYNEIGSVDGKNFDP 424
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 1e-20
Identities = 39/217 (17%), Positives = 73/217 (33%), Gaps = 29/217 (13%)
Query: 120 LTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLK 172
+S + + V + PL + ++ +N+S+N I ++
Sbjct: 398 AKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGS 457
Query: 173 NLKSIVLADNLLNG--------SVPDLQRLVLLEELNLGGNDFGPKFPSLS----KNIVS 220
L SI L N+L + + LL ++L N +V
Sbjct: 458 PLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVG 517
Query: 221 VILRNNSLRSEIPSGLKNFDQLKQFDI------SSNNFVGPIQSFLFSLPSILYLNLAGN 274
+ L NS S+ P+ N LK F I N + + PS+ L + N
Sbjct: 518 IDLSYNSF-SKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSN 576
Query: 275 QLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSN 311
+ + + I + ++ ++I N I S +
Sbjct: 577 DIRK-VNEKI--TPNISVLDIKDNPNISIDLSYVCPY 610
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 1e-19
Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 16/201 (7%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG----EIPMEITSLKNLK 175
L + LSL G G +P I + LEVL + S+ P I++ + +
Sbjct: 77 LNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDE 136
Query: 176 SIVLADNLLNGSVPD---LQRLVLLEELNLGGNDFGPKFPS---LSKNIVSVILRNNSLR 229
+ D + L + + + ++ + +N++
Sbjct: 137 QKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNI- 195
Query: 230 SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAK 289
+ + + +L+QF + ++ FV + N Q + +
Sbjct: 196 TFVSKAVMRLTKLRQFYMGNSPFVAENICEAWEN-----ENSEYAQQYKTEDLKWDNLKD 250
Query: 290 LNFVEISHNLLIGKLPSCIGS 310
L VE+ + + KLP+ + +
Sbjct: 251 LTDVEVYNCPNLTKLPTFLKA 271
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 4e-16
Identities = 39/212 (18%), Positives = 69/212 (32%), Gaps = 24/212 (11%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFI-------YGEIPMEITSLK 172
K N+ ++L + + + L +N+ N + + +
Sbjct: 429 PFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTY 488
Query: 173 NLKSIVLADNLLNGSVPDLQ--RLVLLEELNLGGNDFG--PKFPSLSKNIVSVILRN--- 225
L SI L N L D + L L ++L N F P P S + +RN
Sbjct: 489 LLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRD 548
Query: 226 ---NSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282
N E P G+ L Q I SN+ + P+I L++ N
Sbjct: 549 AQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKIT---PNISVLDIKDNPNISIDLS 605
Query: 283 NISCSAKLNFVEISHNLLIGKLPSCIGSNSLN 314
+ + + ++ K G ++L+
Sbjct: 606 YVCPYIEAGMYMLFYD----KTQDIRGCDALD 633
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 1e-15
Identities = 21/178 (11%), Positives = 62/178 (34%), Gaps = 22/178 (12%)
Query: 119 ILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI--T 169
+ + S L ++L + + L +++ N + ++ + T
Sbjct: 452 LFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKL-TKLSDDFRAT 510
Query: 170 SLKNLKSIVLADNLLN------GSVPDLQRLVLLEELNLGGNDFGPKFP-SLSK--NIVS 220
+L L I L+ N + + L+ + + + GN ++P ++ ++
Sbjct: 511 TLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQ 570
Query: 221 VILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278
+ + +N + ++ + + DI N + S++ L ++ +
Sbjct: 571 LQIGSNDI-RKVNEKI--TPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQD 625
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 7e-21
Identities = 47/297 (15%), Positives = 104/297 (35%), Gaps = 68/297 (22%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILG 514
LIG+G GQ+Y G V+++ + +++ + ++ + V + RH ++V +G
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
C+ P+ + ++ +L + K +L + I +G+ +L
Sbjct: 97 ACM----SPPH----LAIITSLCKGRTLYSVV--RDAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 575 HTGVAPGIFGNNLKTENILLDKAL-------TAKLSGYNIPLPSKKGLESP--------- 618
H A GI +LK++N+ D +SG + L
Sbjct: 147 H---AKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAP 203
Query: 619 --LRGQYVSNQPGDGA---KEDVYQLGVILLQVITGK---QVKSTSEV-----DGLKLQL 665
+R + DV+ LG I ++ + + + + G+K
Sbjct: 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMK--- 260
Query: 666 ETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
P+ + + +I + C + + +RP+ ++ L+
Sbjct: 261 -------PNLSQIGMGKEIS------------DILLFCWAFEQEERPTFTKLMDMLE 298
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 7e-21
Identities = 45/199 (22%), Positives = 75/199 (37%), Gaps = 6/199 (3%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
+N+ VL+L L + R+ L L++ N I P L LK + L N
Sbjct: 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83
Query: 183 LLNGSVPD-LQRLVLLEELNLGGNDF-GPKFPSLS--KNIVSVILRNNSLRSEIPSGLKN 238
L+ L EL+L N K KN++++ L +N L S
Sbjct: 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ 143
Query: 239 FDQLKQFDISSNNFVGPIQSFL--FSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS 296
+ L++ +S+N L F+ S+ L L+ NQ+ E P +L + ++
Sbjct: 144 LENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLN 203
Query: 297 HNLLIGKLPSCIGSNSLNR 315
+ L L + N
Sbjct: 204 NVQLGPSLTEKLCLELANT 222
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 2e-19
Identities = 32/204 (15%), Positives = 75/204 (36%), Gaps = 11/204 (5%)
Query: 118 TILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
+NL L L+S + + + +L L++S N + L+NL+ +
Sbjct: 91 KTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQEL 150
Query: 178 VLADNLLNGSVPD---LQRLVLLEELNLGGN---DFGPKFPSLSKNIVSVILRNNSLRSE 231
+L++N + + + L++L L N +F P + + L N L
Sbjct: 151 LLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPS 210
Query: 232 IPSGLKNFD---QLKQFDISSNNFVGPIQSFLFSL--PSILYLNLAGNQLSEALPVNISC 286
+ L ++ +S++ + L ++ L+L+ N L+ + +
Sbjct: 211 LTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAW 270
Query: 287 SAKLNFVEISHNLLIGKLPSCIGS 310
+L + + +N + +
Sbjct: 271 LPQLEYFFLEYNNIQHLFSHSLHG 294
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 5e-19
Identities = 38/214 (17%), Positives = 72/214 (33%), Gaps = 22/214 (10%)
Query: 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFW---SLEVLNISSNFIYGEIPMEITSLK--N 173
+ L L L ++ L L K+ S+ L++S++ + LK N
Sbjct: 190 CFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTN 249
Query: 174 LKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPS------------LSKNIVS 220
L + L+ N LN D L LE L N+ F L ++
Sbjct: 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTK 309
Query: 221 VILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEAL 280
+ SL + L+ ++ N+ G + L ++ YL+L+ + S
Sbjct: 310 QSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRT 369
Query: 281 PVNISCS----AKLNFVEISHNLLIGKLPSCIGS 310
N + + L+ + ++ N +
Sbjct: 370 LTNETFVSLAHSPLHILNLTKNKISKIESDAFSW 403
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 3e-18
Identities = 37/194 (19%), Positives = 66/194 (34%), Gaps = 15/194 (7%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG--EIPMEITSLKNLKSI 177
L N+ + L + SL+ L + + P L+NL +
Sbjct: 426 WRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTIL 485
Query: 178 VLADNLLNGSVPD-LQRLVLLEELNLGGN-----------DFGPKFPSLSKNIVSVILRN 225
L++N + D L+ L LE L+L N F ++ + L +
Sbjct: 486 DLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLES 545
Query: 226 NSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285
N K+ +LK D+ NN S + S+ LNL N ++
Sbjct: 546 NGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFG 605
Query: 286 CSAK-LNFVEISHN 298
+ + L +++ N
Sbjct: 606 PAFRNLTELDMRFN 619
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 4e-18
Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 15/193 (7%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP-MEITSLKNLKSIVLAD 181
S L +L+L + + LEVL++ N I E+ E L+N+ I L+
Sbjct: 380 HSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSY 439
Query: 182 NLLNGSVPD-LQRLVLLEELNLGGNDFG--PKFPSLSKNIVS---VILRNNSLRSEIPSG 235
N + + L+ L L PS + + + + L NN++ +
Sbjct: 440 NKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM 499
Query: 236 LKNFDQLKQFDISSNN--------FVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287
L+ ++L+ D+ NN G FL L + LNL N E
Sbjct: 500 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559
Query: 288 AKLNFVEISHNLL 300
+L +++ N L
Sbjct: 560 FELKIIDLGLNNL 572
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 8e-18
Identities = 41/187 (21%), Positives = 70/187 (37%), Gaps = 17/187 (9%)
Query: 107 LSANFNIDRFFTILTKLSNLKVLSLVSLGLWG--PLPSKINRFWSLEVLNISSNFIYGEI 164
LS N + + +L+ L L + L PS +L +L++S+N I
Sbjct: 437 LSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANIN 496
Query: 165 PMEITSLKNLKSIVLADNLL---------NGSVPDLQRLVLLEELNLGGNDF---GPK-F 211
+ L+ L+ + L N L G + L+ L L LNL N F + F
Sbjct: 497 DDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVF 556
Query: 212 PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLN 270
L + + L N+L + S N LK ++ N + F + ++ L+
Sbjct: 557 KDL-FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELD 615
Query: 271 LAGNQLS 277
+ N
Sbjct: 616 MRFNPFD 622
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 8e-16
Identities = 48/263 (18%), Positives = 89/263 (33%), Gaps = 28/263 (10%)
Query: 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFN-----IDRFFTILTKLSNLKVL 129
R+ L + + P+ + K + S ++LS + + + F L K +NL +L
Sbjct: 195 GRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGL-KWTNLTML 253
Query: 130 SLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP 189
L L LE + N I + L N++ + L + S+
Sbjct: 254 DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSIS 313
Query: 190 D----------LQRLVLLEELNLGGNDF----GPKFPSLSKNIVSVILRNN-----SLRS 230
Q L LE LN+ ND F L N+ + L N+ +L +
Sbjct: 314 LASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLI-NLKYLSLSNSFTSLRTLTN 372
Query: 231 EIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVN-ISCSAK 289
E L + L +++ N L + L+L N++ + L
Sbjct: 373 ETFVSLAH-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLEN 431
Query: 290 LNFVEISHNLLIGKLPSCIGSNS 312
+ + +S+N + +
Sbjct: 432 IFEIYLSYNKYLQLTRNSFALVP 454
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 3e-15
Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 25/190 (13%)
Query: 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLL 184
+ +V L L +P + ++ VLN++ N + T L S+ + N +
Sbjct: 5 SHEVADCSHLKLTQ-VPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI 61
Query: 185 NGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLK 243
+ P+ Q+L +L+ LNL +N L L
Sbjct: 62 SKLEPELCQKLPMLKVLNLQ---------------------HNELSQLSDKTFAFCTNLT 100
Query: 244 QFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGK 303
+ + SN+ + +++ L+L+ N LS L + +S+N +
Sbjct: 101 ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160
Query: 304 LPSCIGSNSL 313
+ +
Sbjct: 161 KSEELDIFAN 170
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 8e-10
Identities = 29/136 (21%), Positives = 46/136 (33%), Gaps = 4/136 (2%)
Query: 195 VLLEELNLGGNDFGPKFPS-LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV 253
V E + + P L NI + L +N LR + + QL D+ N
Sbjct: 4 VSHEVADCSHLKLT-QVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS 62
Query: 254 GPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS-NS 312
LP + LNL N+LS+ + L + + N + + +
Sbjct: 63 KLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKN 122
Query: 313 LNRTVVSTWNCLSGVN 328
L +S N LS
Sbjct: 123 LITLDLS-HNGLSSTK 137
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 2e-09
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
L + N L LS+L +L+L S G + L+++++ N +
Sbjct: 517 ARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLP 576
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVL--LEELNLGGNDF 207
+ +LKS+ L NL+ + L EL++ N F
Sbjct: 577 ASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPF 621
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 1e-20
Identities = 49/302 (16%), Positives = 105/302 (34%), Gaps = 45/302 (14%)
Query: 452 NFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
++ +GEG + L DG ++K + ++ + + ++ H +++
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL-TDWKKKDMLKWPQRMAIIIGATR 569
++ +C+ +L+L G+L + + K + L Q + +++G R
Sbjct: 90 RLVAYCL----RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKL--------SGYNIPLPSKKGLESPLRG 621
G++ +H G +LK NILL L + ++ +
Sbjct: 146 GLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 622 QY----------VSNQPGD--GAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCL 669
Q S Q + DV+ LG +L ++ G+ D + + ++
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE-----GPYDMVFQKGDSVA 257
Query: 670 AEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL---WNLQYSIQ 726
++L P +L + ++ D +RP I +L LQ
Sbjct: 258 LAVQNQLSIPQSPRH-----SSALWQLLNS---MMTVDPHQRPHIPLLLSQLEALQPPAP 309
Query: 727 VQ 728
Q
Sbjct: 310 GQ 311
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 1e-20
Identities = 45/309 (14%), Positives = 91/309 (29%), Gaps = 29/309 (9%)
Query: 28 QLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNKS 87
+ + + Q LE ++ G S+L+ N + E +
Sbjct: 211 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALE-GLCNLTIEEFRLAYLDY 269
Query: 88 SPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVL------------------ 129
F + + S S + + L
Sbjct: 270 YLDDII-DLFNCLT-NVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSL 327
Query: 130 -SLVSLGLWGPLPSKINRFWSLEVLNISSNFIY--GEIPMEITSLKNLKSIVLADNLLNG 186
L G SLE L++S N + G +LK + L+ N +
Sbjct: 328 KRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT 387
Query: 187 SVPDLQRLVLLEELNLGGNDFGPKFP----SLSKNIVSVILRNNSLRSEIPSGLKNFDQL 242
+ L LE L+ ++ +N++ + + + R L
Sbjct: 388 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL 447
Query: 243 KQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLI 301
+ ++ N+F +F+ L ++ +L+L+ QL + P + + L + +SHN
Sbjct: 448 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 507
Query: 302 GKLPSCIGS 310
Sbjct: 508 SLDTFPYKC 516
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 2e-20
Identities = 37/197 (18%), Positives = 73/197 (37%), Gaps = 10/197 (5%)
Query: 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL 183
+ K L L L F L+VL++S I SL +L +++L N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 184 LNGSVPD-LQRLVLLEELNLGGNDF-GPKFPSLS--KNIVSVILRNNSLRS-EIPSGLKN 238
+ L L++L + + + K + + + +N ++S ++P N
Sbjct: 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN 147
Query: 239 FDQLKQFDISSNNFVGPIQSFLFSLPSI----LYLNLAGNQLSEALPVNISCSAKLNFVE 294
L+ D+SSN + L L + L L+L+ N ++ P +L+ +
Sbjct: 148 LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLT 206
Query: 295 ISHNLLIGKLPSCIGSN 311
+ +N +
Sbjct: 207 LRNNFDSLNVMKTCIQG 223
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 3e-20
Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 8/190 (4%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNLKSIV 178
++LK L L G+ + S LE L+ + + + SL+NL +
Sbjct: 369 DFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 427
Query: 179 LADNLLNGSVPD-LQRLVLLEELNLGGNDFG----PKFPSLSKNIVSVILRNNSLRSEIP 233
++ + L LE L + GN F P + +N+ + L L P
Sbjct: 428 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 487
Query: 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI-SCSAKLNF 292
+ + L+ ++S NNF L S+ L+ + N + + + + L F
Sbjct: 488 TAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF 547
Query: 293 VEISHNLLIG 302
+ ++ N
Sbjct: 548 LNLTQNDFAC 557
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 1e-19
Identities = 39/192 (20%), Positives = 67/192 (34%), Gaps = 9/192 (4%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L+VL L + L L ++ N I + L +L+ +V
Sbjct: 48 FFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107
Query: 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFG----PKFPSLSKNIVSVILRNNSLRSEIPS 234
+ L + L L+ELN+ N P++ S N+ + L +N ++S +
Sbjct: 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167
Query: 235 GLKNFDQLKQFDIS---SNNFVGPIQSFLFSLPSILYLNLAGNQLS-EALPVNISCSAKL 290
L+ Q+ ++S S N + IQ F + L L N S + I A L
Sbjct: 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGL 227
Query: 291 NFVEISHNLLIG 302
+
Sbjct: 228 EVHRLVLGEFRN 239
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-19
Identities = 36/216 (16%), Positives = 67/216 (31%), Gaps = 9/216 (4%)
Query: 103 SQQSLSANFNIDRFFTILTKLSNLKVLSLV--SLGLWGPLPSKINRFWSLEVLNISSNFI 160
S + L+ N L +L+ L L L G SL+ L++S N +
Sbjct: 326 SLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGV 385
Query: 161 YGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKFPSL---S 215
+ L+ L+ + + L L L L++ F +
Sbjct: 386 IT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 444
Query: 216 KNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274
++ + + NS + L D+S + SL S+ LN++ N
Sbjct: 445 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 504
Query: 275 QLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
C L ++ S N ++ +
Sbjct: 505 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 540
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 2e-18
Identities = 37/208 (17%), Positives = 78/208 (37%), Gaps = 13/208 (6%)
Query: 110 NFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT 169
++ +D + L+N+ SLVS+ + + + + L + + G+ P
Sbjct: 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKF-GQFPTL-- 322
Query: 170 SLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDF-----GPKFPSLSKNIVSVILR 224
LK+LK + N + L LE L+L N + + ++ + L
Sbjct: 323 KLKSLKRLTFTSNKGGNA-FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS 381
Query: 225 NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI-QSFLFSLPSILYLNLAGNQLSEALPVN 283
N + + S +QL+ D +N S SL +++YL+++ A
Sbjct: 382 FNGV-ITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI 440
Query: 284 ISCSAKLNFVEISHNLLIGKLPSCIGSN 311
+ + L ++++ N I +
Sbjct: 441 FNGLSSLEVLKMAGNSFQENFLPDIFTE 468
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 4e-17
Identities = 42/221 (19%), Positives = 73/221 (33%), Gaps = 16/221 (7%)
Query: 106 SLSAN-FNIDRFFTILTKLSNLKVLSLVS---LGLWGPLPSKINRFWSLEVLNISSN--- 158
+L N +++ T + L+ L+V LV + L L I
Sbjct: 206 TLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265
Query: 159 ---FIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS 215
+ +I L N+ S L + V D + L L FG
Sbjct: 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKL 324
Query: 216 KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSN--NFVGPIQSFLFSLPSILYLNLAG 273
K++ L S + + L+ D+S N +F G F S+ YL+L+
Sbjct: 325 KSLKR--LTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSF 382
Query: 274 NQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLN 314
N + + N +L ++ H+ L + + N
Sbjct: 383 NGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN 422
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 6e-17
Identities = 41/253 (16%), Positives = 78/253 (30%), Gaps = 20/253 (7%)
Query: 74 NSRVTELTVIGNKSSPAHSPKPTFGKFSASQQ---SLSANFNIDRFFTI-LTKLSNLKVL 129
R+ +LT+ N S + K + + L N + L L L
Sbjct: 199 EIRLHKLTLRNNFDSL-NVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 257
Query: 130 SLVSLGL------WGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL 183
++ L + N ++ ++ S I + + + L +
Sbjct: 258 TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCK 315
Query: 184 LNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS-KNIVSVILRNNSL--RSEIPSGLKNFD 240
L L+ L N G F + ++ + L N L +
Sbjct: 316 FGQFPTLK--LKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTT 373
Query: 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS-AKLNFVEISHNL 299
LK D+S N + +FL L + +L+ + L + ++ S L +++ISH
Sbjct: 374 SLKYLDLSFNGVITMSSNFL-GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 432
Query: 300 LIGKLPSCIGSNS 312
S
Sbjct: 433 TRVAFNGIFNGLS 445
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 1e-13
Identities = 33/220 (15%), Positives = 68/220 (30%), Gaps = 30/220 (13%)
Query: 106 SLSAN----FNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEV----LNISS 157
+++ N F + +F+ L+NL+ L L S + + + + + L++S
Sbjct: 130 NVAHNLIQSFKLPEYFS---NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186
Query: 158 NFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFG------- 208
N + I L + L +N + +V +Q L LE L +F
Sbjct: 187 NPM-NFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEK 245
Query: 209 ---PKFPSLSKNIVSV--ILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ-SFLFS 262
L + + + +I + F + S S+ F
Sbjct: 246 FDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFG 305
Query: 263 LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302
+L L + + + + +L F
Sbjct: 306 W---QHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFS 342
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 1e-09
Identities = 20/99 (20%), Positives = 32/99 (32%)
Query: 212 PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNL 271
+L + ++ L N LR +F +L+ D+S SL + L L
Sbjct: 24 DNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLIL 83
Query: 272 AGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
GN + S + L + L IG
Sbjct: 84 TGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGH 122
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 6e-19
Identities = 46/234 (19%), Positives = 82/234 (35%), Gaps = 18/234 (7%)
Query: 91 HSPKPTFGKFSASQ-QSLSANFNIDRFFTI----LTKLSNLKVLSLVSLGLWGPLPSKIN 145
F +S++ + FF I S L+ L L + L LPS +
Sbjct: 242 DISPAVFEGLCEMSVESINLQKH--YFFNISSNTFHCFSGLQELDLTATHL-SELPSGLV 298
Query: 146 RFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLG 203
+L+ L +S+N + ++ +L + + N + L+ L L EL+L
Sbjct: 299 GLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLS 358
Query: 204 GNDF------GPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PI 256
+D + +LS ++ S+ L N S K QL+ D++
Sbjct: 359 HDDIETSDCCNLQLRNLS-HLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDA 417
Query: 257 QSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
QS +L + LNL+ + L + L + + N S
Sbjct: 418 QSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNS 471
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 4e-17
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 12/206 (5%)
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP 165
L+A ++ + L LS LK L L + + F SL L+I N E+
Sbjct: 284 DLTAT-HLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELG 342
Query: 166 ME-ITSLKNLKSIVLADNLLNGSVPD---LQRLVLLEELNLGGNDFG---PKFPSLSKNI 218
+ +L+NL+ + L+ + + S L+ L L+ LNL N+ + +
Sbjct: 343 TGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQL 402
Query: 219 VSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277
+ L L+ + +N LK ++S + + LP++ +LNL GN
Sbjct: 403 ELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFP 462
Query: 278 EALPVNISCSA---KLNFVEISHNLL 300
+ + +L + +S L
Sbjct: 463 KGNIQKTNSLQTLGRLEILVLSFCDL 488
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 7e-16
Identities = 37/222 (16%), Positives = 76/222 (34%), Gaps = 16/222 (7%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFW---SLEVLNISSNFIY--GEIPMEITSLKNL 174
+ +L LS+ L + +L L++S + I +++ +L +L
Sbjct: 321 ASNFPSLTHLSIKGNTKRLELGTGC--LENLENLRELDLSHDDIETSDCCNLQLRNLSHL 378
Query: 175 KSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDF----GPKFPSLSKNIVSVILRNNSLR 229
+S+ L+ N + + LE L+L + + L ++ L
Sbjct: 379 QSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLD 438
Query: 230 SEIPSGLKNFDQLKQFDISSNNFVGPIQ---SFLFSLPSILYLNLAGNQLSEALPVNISC 286
L+ ++ N+F + L +L + L L+ LS +
Sbjct: 439 ISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTS 498
Query: 287 SAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328
+N V++SHN L S+ + N +S +
Sbjct: 499 LKMMNHVDLSHNRLTS-SSIEALSHLKGIYLNLASNHISIIL 539
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 1e-15
Identities = 47/212 (22%), Positives = 79/212 (37%), Gaps = 27/212 (12%)
Query: 107 LSANF--NIDRFFTILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISS 157
LS + D L LS+L+ L+L + + P LE+L+++
Sbjct: 357 LSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQ-------LELLDLAF 409
Query: 158 NFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFG------- 208
+ + +L LK + L+ +LL+ S L L+ LNL GN F
Sbjct: 410 TRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKT 469
Query: 209 PKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILY 268
+L + ++L L S + + D+S N S +Y
Sbjct: 470 NSLQTLG-RLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS-SSIEALSHLKGIY 527
Query: 269 LNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
LNLA N +S LP + ++ + + N L
Sbjct: 528 LNLASNHISIILPSLLPILSQQRTINLRQNPL 559
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 5e-14
Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 7/183 (3%)
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLE 198
+P + S E L S N + + L NL + L + D Q L+
Sbjct: 27 IPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLD 84
Query: 199 ELNLGGN---DFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGP 255
L L N S K + + + S L N L+ + SN+
Sbjct: 85 TLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSI 144
Query: 256 IQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS-HNLLIGKLPSCIGSNSLN 314
F + L+ N + ++S + + ++ + I + +++
Sbjct: 145 KLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVF 204
Query: 315 RTV 317
+++
Sbjct: 205 QSL 207
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 5e-14
Identities = 38/192 (19%), Positives = 64/192 (33%), Gaps = 11/192 (5%)
Query: 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178
L+ LK L + G+ ++ +LE L + SN I + + LK +
Sbjct: 100 ALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLD 159
Query: 179 LADNLLNGSVPD----LQRLVLLEELNLGGNDFG--PKFPSLSKNIVSVILRNNSLRSEI 232
+N ++ + LQ+ L LNL GND S S+ I
Sbjct: 160 FQNNAIHYLSKEDMSSLQQATNL-SLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVI 218
Query: 233 PSGLKN--FDQLKQFDISSNNFVGPIQSFLFSLP--SILYLNLAGNQLSEALPVNISCSA 288
GLKN L + + L S+ +NL + C +
Sbjct: 219 FKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFS 278
Query: 289 KLNFVEISHNLL 300
L ++++ L
Sbjct: 279 GLQELDLTATHL 290
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 1e-13
Identities = 41/203 (20%), Positives = 75/203 (36%), Gaps = 13/203 (6%)
Query: 117 FTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI--TSLKNL 174
+ L + +NL L+L + G + + LN I + +++++L
Sbjct: 173 MSSLQQATNLS-LNLNGNDIAG-IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSL 230
Query: 175 KSIVLADNLLNGSVPDL---QRLVLLEELNLGGNDF---GPKFPSLSKNIVSVILRNNSL 228
D P + + +E +NL + F + + L L
Sbjct: 231 WLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHL 290
Query: 229 RSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS- 287
SE+PSGL LK+ +S+N F Q + PS+ +L++ GN L +
Sbjct: 291 -SELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENL 349
Query: 288 AKLNFVEISHNLLIGKLPSCIGS 310
L +++SH+ I C
Sbjct: 350 ENLRELDLSHD-DIETSDCCNLQ 371
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 1e-09
Identities = 26/172 (15%), Positives = 53/172 (30%), Gaps = 30/172 (17%)
Query: 119 ILTKLSNLKVLSLVS---LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLK 175
+ L L+ L+L + + LE+L +S + TSLK +
Sbjct: 444 LFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503
Query: 176 SIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSG 235
+ L+ N L S + L ++ L +N + +PS
Sbjct: 504 HVDLSHNRLTSSSIEA-------------------LSHLKGIYLN--LASNHISIILPSL 542
Query: 236 LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287
L Q + ++ N ++ + + +L + + C
Sbjct: 543 LPILSQQRTINLRQNPLDCTCS----NIYFLEWYKENMQKLED--TEDTLCE 588
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 6e-19
Identities = 54/299 (18%), Positives = 108/299 (36%), Gaps = 51/299 (17%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
++F+ ++G+G+ GQ+ K D ++K ++ + L +++ V LL+ L H++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVMLLASLNHQY 63
Query: 509 LVSILG-----HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
+V + ST+F+ +E+ NG+L D + +++ +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI---HSENLNQQRDEYWR 120
Query: 564 IIG-ATRGVQFLHTGVAPGIFGNNLKTENILLD-------------KALTAKLSGYNIPL 609
+ + ++H + GI +LK NI +D K + L +
Sbjct: 121 LFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 610 PSKKGLESPLRGQ-----YVS-----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVD 659
+ G L YV+ K D+Y LG+I ++I + E
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FSTGMERV 235
Query: 660 GLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ +L + E P + +I + D KRP +L
Sbjct: 236 NILKKLRSVSIEFPPDFDDNKMKVEK------------KIIRLLIDHDPNKRPGARTLL 282
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 1e-18
Identities = 61/295 (20%), Positives = 110/295 (37%), Gaps = 43/295 (14%)
Query: 443 LEEIEEATNNFDPTN-------LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQ 492
+EE+E IG GS +YKG V+ L+ ++ + Q
Sbjct: 11 IEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ 70
Query: 493 SLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK 552
+ E+L L+H ++V ++ + LV E +++G+L+ YL +K
Sbjct: 71 RFKEEAEMLKGLQHPNIVRFYDS----WESTVKGKKCIVLVTELMTSGTLKTYLKRFKV- 125
Query: 553 DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGYNIPLPS 611
+K + +G+QFLHT P I +LK +NI + + K+ +
Sbjct: 126 --MKIKVLRSWCRQILKGLQFLHTRTPPIIHR-DLKCDNIFITGPTGSVKIGDLGLATLK 182
Query: 612 KKGLESPLRG-------QYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLK-L 663
+ + G + DVY G+ +L++ T + SE +
Sbjct: 183 RASFAKAVIGTPEFMAPEMYEE--KYDESVDVYAFGMCMLEMATSE--YPYSECQNAAQI 238
Query: 664 QLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
P+ A P V+ EI C+ ++ +R SI+D+L
Sbjct: 239 YRRVTSGVKPASFDKVAIPEVK------------EIIEGCIRQNKDERYSIKDLL 281
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 3e-18
Identities = 51/282 (18%), Positives = 105/282 (37%), Gaps = 38/282 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP---QSLMQHVELLSKLRH 506
NF IG G ++Y+ L DG V++K +++ ++ ++LL +L H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKD-MLKWPQRMAIII 565
+ ++ Y + + +VLE G L + +KK+ ++ +
Sbjct: 92 PN--------VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI--PLPSKKGLESPLRG-- 621
++ +H + + ++K N+ + KL + SK L G
Sbjct: 144 QLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTP 200
Query: 622 QYVS-----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676
Y+S + K D++ LG +L ++ + +++ L +
Sbjct: 201 YYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-------- 251
Query: 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ + P Y+ + LR V C++ D KRP + V
Sbjct: 252 QCDYPPLPSDHYSEE-LRQLVN---MCINPDPEKRPDVTYVY 289
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 1e-17
Identities = 55/285 (19%), Positives = 99/285 (34%), Gaps = 50/285 (17%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILG 514
IG G ++++ ++K + L++ S + L+KL+
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS------ 68
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
I+ D+ T +++V+E N L +L KKK + +R + V +
Sbjct: 69 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTI 124
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLS-----------GYNIPLPSKKG--------- 614
H GI ++LK N L+ KL ++ S+ G
Sbjct: 125 H---QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 180
Query: 615 -LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673
+ + ++ K DV+ LG IL + GK + + Q+ A
Sbjct: 181 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-----TPFQQIINQISKLHAIID 235
Query: 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
E P + D L+ CL +D +R SI ++L
Sbjct: 236 PNHEIE-FPDIPEKDLQDVLK-------CCLKRDPKQRISIPELL 272
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 1e-17
Identities = 65/299 (21%), Positives = 108/299 (36%), Gaps = 63/299 (21%)
Query: 458 LIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGH 515
++ EG +Y+ + G ++K L + ++++Q V + KL H ++V
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
+ ++ +TG FL+L + G L ++L + + L + I R VQ +H
Sbjct: 95 ASIGKEE-SDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLSGY---NIPLPSKKGLESPLRGQYV-------- 624
P I +LK EN+LL T KL + S R V
Sbjct: 154 R-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT 212
Query: 625 -------------SNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA- 670
SN P G K+D++ LG IL + +
Sbjct: 213 TPMYRTPEIIDLYSNFP-IGEKQDIWALGCILYLLCFRQ------------------HPF 253
Query: 671 EAPSKLRAEADPSVRGTYA-------YDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
E +KLR V G Y+ Y + + L + +R SI +V+ LQ
Sbjct: 254 EDGAKLRI-----VNGKYSIPPHDTQYTVFHSLIRA---MLQVNPEERLSIAEVVHQLQ 304
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 1e-17
Identities = 55/285 (19%), Positives = 99/285 (34%), Gaps = 50/285 (17%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILG 514
IG G ++++ ++K + L++ S + L+KL+
Sbjct: 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS------ 87
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
I+ D+ T +++V+E N L +L KKK + +R + V +
Sbjct: 88 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTI 143
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLS-----------GYNIPLPSKKG--------- 614
H GI ++LK N L+ KL ++ S+ G
Sbjct: 144 H---QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 199
Query: 615 -LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673
+ + ++ K DV+ LG IL + GK + + Q+ A
Sbjct: 200 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-----TPFQQIINQISKLHAIID 254
Query: 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
E P + D L+ CL +D +R SI ++L
Sbjct: 255 PNHEIE-FPDIPEKDLQDVLK-------CCLKRDPKQRISIPELL 291
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 55/289 (19%), Positives = 109/289 (37%), Gaps = 54/289 (18%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
+F LIG G GQ++K DG +K +K + + V+ L+KL H ++
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66
Query: 510 VSILGH--------CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
V G + + +F+ +E G+L ++ ++ + L +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK-RRGEKLDKVLAL 125
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRG 621
+ T+GV ++H+ + +LK NI L K+ + + L++ +
Sbjct: 126 ELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGL---VTS-LKNDGKR 178
Query: 622 Q-------YVS-----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCL 669
Y+S +Q + D+Y LG+IL +++ + E
Sbjct: 179 TRSKGTLRYMSPEQISSQDYG-KEVDLYALGLILAELLHVC--DTAFETSKFF------- 228
Query: 670 AEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ LR D + + +T ++ LSK RP+ ++L
Sbjct: 229 ----TDLR---DGIISDIFDKK-EKTLLQ---KLLSKKPEDRPNTSEIL 266
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 2e-17
Identities = 61/283 (21%), Positives = 118/283 (41%), Gaps = 46/283 (16%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKL-----KQRHLPQSLMQHVELLSKL 504
+ IGEGS G+ DG + +K + + K+R + + V +L+ +
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER---EESRREVAVLANM 80
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
+H + I+ Y++ ++++V+++ G L + +K + + Q +
Sbjct: 81 KHPN--------IVQYRESFEENGSLYIVMDYCEGGDLFKRINA-QKGVLFQEDQILDWF 131
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP--LPSKKGLESPLRG- 621
+ ++ +H I ++K++NI L K T +L + I L S L G
Sbjct: 132 VQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGT 188
Query: 622 -QYVS-----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675
Y+S N+P + K D++ LG +L ++ T K + L L K
Sbjct: 189 PYYLSPEICENKPYN-NKSDIWALGCVLYELCTLKHAFEAGSMKNLVL-----------K 236
Query: 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ + + P V Y+YD LR+ V ++ RPS+ +L
Sbjct: 237 IISGSFPPVSLHYSYD-LRSLVS---QLFKRNPRDRPSVNSIL 275
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 4e-17
Identities = 46/295 (15%), Positives = 98/295 (33%), Gaps = 48/295 (16%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP-QSLMQHVELLSKLRHRH 508
+F+P +G G G +++ D ++K ++L R L + +M+ V+ L+KL H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 509 LV----SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
+V + L + +++ ++ +L+D++ + + + I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL----------SGYNIPLPSKKG 614
+ V+FLH + G+ +LK NI K+
Sbjct: 125 LQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 615 LESPLRGQYV-----------SNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKL 663
V K D++ LG+IL +++
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYS-HKVDIFSLGLILFELLY-------------PF 227
Query: 664 QLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ + +R P + Y V+ + LS +RP +++
Sbjct: 228 STQMERVRTLTDVRNLKFPPLFTQK-YPCEYVMVQ---DMLSPSPMERPEAINII 278
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 4e-17
Identities = 30/180 (16%), Positives = 50/180 (27%), Gaps = 7/180 (3%)
Query: 105 QSLSANFN-IDRFFTILTKLSNLKVLSLVSLGLWG-PLPSKINRFWSLEVLNISSNFIYG 162
+ L +FN L L+ L L S L L+IS
Sbjct: 379 RHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKI 438
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN---DFGPKFPSLSKN 217
+ L +L ++ +A N + L L+L
Sbjct: 439 DFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHR 498
Query: 218 IVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277
+ + + +N+L S L D S N S+ + NL N ++
Sbjct: 499 LQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 4e-15
Identities = 40/204 (19%), Positives = 77/204 (37%), Gaps = 14/204 (6%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
++S ++ + K + LS++ L P+ L+ L ++ N I
Sbjct: 288 SAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPT--LDLPFLKSLTLTMNKG--SI 342
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPD---LQRLVLLEELNLGGND---FGPKFPSLSKNI 218
+ +L +L + L+ N L+ S L L+L N F L +
Sbjct: 343 SFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLE-EL 401
Query: 219 VSVILRNNSLRSEIP-SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277
+ ++++L+ S + ++L DIS N L S+ L +AGN
Sbjct: 402 QHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFK 461
Query: 278 EALPVNISCSA-KLNFVEISHNLL 300
+ N+ + L F+++S L
Sbjct: 462 DNTLSNVFANTTNLTFLDLSKCQL 485
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 3e-14
Identities = 36/204 (17%), Positives = 67/204 (32%), Gaps = 9/204 (4%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLW--GPLPSKINRFWSLEVLNISSNFIYG 162
+SL+ N L +L L L L G SL L++S N
Sbjct: 331 KSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI- 389
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGNDFGPKFPSL---SKN 217
+ L+ L+ + + L L L L++ + F + +
Sbjct: 390 IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTS 449
Query: 218 IVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276
+ ++ + NS + S N L D+S +L + LN++ N L
Sbjct: 450 LNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNL 509
Query: 277 SEALPVNISCSAKLNFVEISHNLL 300
+ + L+ ++ S N +
Sbjct: 510 LFLDSSHYNQLYSLSTLDCSFNRI 533
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 1e-13
Identities = 28/183 (15%), Positives = 66/183 (36%), Gaps = 11/183 (6%)
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLE 198
+P I S + +++S N + ++ L+ + L+ + L L
Sbjct: 26 VPDDI--PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83
Query: 199 ELNLGGN---DFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG- 254
L L GN F P S ++ +++ L S + LK+ +++ N
Sbjct: 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSC 143
Query: 255 PIQSFLFSLPSILYLNLAGNQLS----EALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
+ ++ +L ++++++L+ N + L +++S N +
Sbjct: 144 KLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG 203
Query: 311 NSL 313
L
Sbjct: 204 IKL 206
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 2e-13
Identities = 27/166 (16%), Positives = 48/166 (28%), Gaps = 13/166 (7%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
L +L L L + P + SLE L + I L LK + +A N
Sbjct: 79 LHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHN 138
Query: 183 LLNGSVPD--LQRLVLLEELNLGGN--------DFGPKFPSLSKNIVSVILRNNSLRSEI 232
++ L L ++L N D + +S+ + N +
Sbjct: 139 FIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQF-LRENPQVNLSLDMSLNPIDFIQ 197
Query: 233 PSGLKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLS 277
+ +L + + N I L + L +
Sbjct: 198 DQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFK 242
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 7e-13
Identities = 41/211 (19%), Positives = 72/211 (34%), Gaps = 18/211 (8%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG-EIPMEITSLKNLKSIV 178
+ L++L+ L V L I + +L+ LN++ NFI+ ++P ++L NL +
Sbjct: 100 FSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVD 159
Query: 179 LADNLLNGSVP-DLQRL----VLLEELNLGGNDFG--PKFPSLSKNIVSVILRNNSLRSE 231
L+ N + DLQ L + L++ N + + LR N S
Sbjct: 160 LSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSN 219
Query: 232 IPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLP--------SILYLNLAGNQLSEALPV 282
I L+N L + F +F +I L V
Sbjct: 220 IMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIV 279
Query: 283 NISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313
C A ++ + ++ I L
Sbjct: 280 KFHCLANVSAMSLAGV-SIKYLEDVPKHFKW 309
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 6e-17
Identities = 62/345 (17%), Positives = 114/345 (33%), Gaps = 53/345 (15%)
Query: 400 KYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNN---FDPT 456
+ + + K ++ Q M S +G S E + +
Sbjct: 2 HHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSIL 61
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILG 514
IG G ++++ ++K + L++ S + L+KL+
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS------ 115
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
I+ D+ T +++V+E N L +L KKK + +R + V +
Sbjct: 116 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTI 171
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLS-----------GYNIPLPSKKG--------- 614
H GI ++LK N L+ KL ++ S+ G
Sbjct: 172 H---QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEA 227
Query: 615 -LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673
+ + ++ K DV+ LG IL + GK + + Q+ A
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK-----TPFQQIINQISKLHAIID 282
Query: 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
E P + D L+ CL +D +R SI ++L
Sbjct: 283 PNHEIE-FPDIPEKDLQDVLK-------CCLKRDPKQRISIPELL 319
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 2e-16
Identities = 59/286 (20%), Positives = 106/286 (37%), Gaps = 43/286 (15%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKL-----KQRHLPQSLMQHVELLSKL 504
+++ IG GS G+ K +DG + K L ++ Q L+ V LL +L
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK---QMLVSEVNLLREL 62
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKD-MLKWPQRMAI 563
+H ++V D NT T+++V+E+ G L +T K+ L + +
Sbjct: 63 KHPNIVRYYDR----IIDRTNT--TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116
Query: 564 IIGATRGVQFLHTGVAPG--IFGNNLKTENILLDKALTAKLSGYNIP--LPSKKGLESPL 619
+ T ++ H G + +LK N+ LD KL + + L
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF 176
Query: 620 RG--QYVS-----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672
G Y+S + K D++ LG +L ++ + L
Sbjct: 177 VGTPYYMSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELA---------- 225
Query: 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
K+R + Y+ + L + L+ RPS+E++L
Sbjct: 226 -GKIREGKFRRIPYRYSDE-LNEIIT---RMLNLKDYHRPSVEEIL 266
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 3e-16
Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 24/212 (11%)
Query: 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178
I + K+ + L L S W+++ L++S N + ++ L+ +
Sbjct: 5 IKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLN 64
Query: 179 LADNLLNGSVPDLQRLVLLEELNLGGNDFG--PKFPSL-----SKNIVSVI--------- 222
L+ N+L DL+ L L L+L N PS+ + N +S +
Sbjct: 65 LSSNVLY-ETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKK 123
Query: 223 ---LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAGNQLSE 278
L NN + +++ D+ N S ++ +LNL N + +
Sbjct: 124 NIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183
Query: 279 ALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
+ + + KL +++S N L + S
Sbjct: 184 -VKGQVVFA-KLKTLDLSSNKLA-FMGPEFQS 212
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 9e-09
Identities = 32/193 (16%), Positives = 60/193 (31%), Gaps = 37/193 (19%)
Query: 120 LTKLSNLKVLSL-----VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNL 174
S ++ L L ++ +LE LN+ NFIY ++ ++ L
Sbjct: 140 EGCRSRVQYLDLKLNEIDTV----NFAELAASSDTLEHLNLQYNFIY-DVKGQV-VFAKL 193
Query: 175 KSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS 234
K++ L+ N L P+ Q + ++L N I
Sbjct: 194 KTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKL----------------------VLIEK 231
Query: 235 GLKNFDQLKQFDISSNNFV-GPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFV 293
L+ L+ FD+ N F G ++ F + + + L + +
Sbjct: 232 ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKK---LTGQNEEECTVPTL 288
Query: 294 EISHNLLIGKLPS 306
LP+
Sbjct: 289 GHYGAYCCEDLPA 301
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 5e-16
Identities = 38/210 (18%), Positives = 78/210 (37%), Gaps = 24/210 (11%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
+ K+ + L L S W+++ L++S N + ++ L+ + L+ N
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 183 LLNGSVPDLQRLVLLEELNLGGNDFG--PKFPSL-----SKNIVSVI------------L 223
+L DL+ L L L+L N PS+ + N +S + L
Sbjct: 69 VLY-ETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYL 127
Query: 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAGNQLSEALPV 282
NN + +++ D+ N S ++ +LNL N + + +
Sbjct: 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG 186
Query: 283 NISCSAKLNFVEISHNLLIGKLPSCIGSNS 312
+ + KL +++S N + + S +
Sbjct: 187 QVVFA-KLKTLDLSSN-KLAFMGPEFQSAA 214
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 2e-08
Identities = 31/186 (16%), Positives = 55/186 (29%), Gaps = 34/186 (18%)
Query: 120 LTKLSNLKVLSL-----VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNL 174
S ++ L L ++ +LE LN+ NFIY ++ ++ L
Sbjct: 140 EGCRSRVQYLDLKLNEIDTV----NFAELAASSDTLEHLNLQYNFIY-DVKGQV-VFAKL 193
Query: 175 KSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS 234
K++ L+ N L P+ Q + ++L N I
Sbjct: 194 KTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKL----------------------VLIEK 231
Query: 235 GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVE 294
L+ L+ FD+ N F FS + +A + + N
Sbjct: 232 ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV-QTVAKQTVKKLTGQNEEECTVPTLGH 290
Query: 295 ISHNLL 300
Sbjct: 291 YGAYCC 296
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 2e-06
Identities = 19/188 (10%), Positives = 55/188 (29%), Gaps = 13/188 (6%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
+ + +SL + L + + +LE ++ N + + S V
Sbjct: 210 FQSAAGVTWISLRNNKL-VLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVA 268
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS-------EI 232
+ + + + + + G + ++++ + ++L S +
Sbjct: 269 KQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERL 328
Query: 233 PSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNF 292
+N + ++ D + I + + L L E + +
Sbjct: 329 ECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDE-----QVSNGRRAH 383
Query: 293 VEISHNLL 300
E+ L
Sbjct: 384 AELDGTLQ 391
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 5e-16
Identities = 43/208 (20%), Positives = 87/208 (41%), Gaps = 25/208 (12%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
+LS+L+ +++ + GL LP + +F LE L ++ N + +P I SL L+ + +
Sbjct: 100 AFRLSHLQHMTIDAAGLME-LPDTMQQFAGLETLTLARNPL-RALPASIASLNRLRELSI 157
Query: 180 ADNLLNGSVPD----------LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI------L 223
+P+ Q LV L+ L L SL +I ++ +
Sbjct: 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWT----GIRSLPASIANLQNLKSLKI 213
Query: 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAG-NQLSEALPV 282
RN+ L + + + + +L++ D+ + + L L + L LP+
Sbjct: 214 RNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLT-LPL 271
Query: 283 NISCSAKLNFVEISHNLLIGKLPSCIGS 310
+I +L +++ + + +LPS I
Sbjct: 272 DIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 1e-12
Identities = 28/170 (16%), Positives = 48/170 (28%), Gaps = 12/170 (7%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG 208
E L + + L + AD S + G
Sbjct: 13 GRENLYFQGST---ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRAL- 68
Query: 209 PKFPSL-----SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSL 263
L V++ LR+ L P L+ I + + + +
Sbjct: 69 KATADLLEDATQPGRVALELRSVPLPQ-FPDQAFRLSHLQHMTIDAAGLME-LPDTMQQF 126
Query: 264 PSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313
+ L LA N L LP +I+ +L + I + +LP + S
Sbjct: 127 AGLETLTLARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDA 175
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 1e-11
Identities = 38/190 (20%), Positives = 71/190 (37%), Gaps = 31/190 (16%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFW---------SLEVLNISSNFIYGEIPMEITS 170
+ L+ L+ LS+ + LP + +L+ L + I +P I +
Sbjct: 146 IASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIAN 204
Query: 171 LKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS 230
L+NLKS+ + ++ L+ P + L LEEL+L G +LR+
Sbjct: 205 LQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRG--------------------CTALRN 244
Query: 231 EIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKL 290
P LK+ + + + + + L + L+L G LP I+
Sbjct: 245 -YPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN 303
Query: 291 NFVEISHNLL 300
+ + +L
Sbjct: 304 CIILVPPHLQ 313
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 3e-09
Identities = 30/168 (17%), Positives = 52/168 (30%), Gaps = 12/168 (7%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
L L NL+ L L G+ LP+ I +L+ L I ++ + +
Sbjct: 164 TELPEPLASTDASGEHQGLVNLQSLRLEWTGIRS-LPASIANLQNLKSLKIRNSPL-SAL 221
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNI----- 218
I L L+ + L + P L+ L L +L +I
Sbjct: 222 GPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCS---NLLTLPLDIHRLTQ 278
Query: 219 -VSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPS 265
+ LR S +PS + + + Q + P+
Sbjct: 279 LEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVARPA 326
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 75.6 bits (186), Expect = 6e-15
Identities = 46/297 (15%), Positives = 94/297 (31%), Gaps = 47/297 (15%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
++G+G+ +++G G ++K + M+ E+L KL H+++V +
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA- 74
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
++ T L++E GSL L + L + + ++ G+ L
Sbjct: 75 ---IEEET--TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 576 TGVAPGIFGNNLKTENILLDKAL------------TAKLSGYNIPLPSKKGLESPL---- 619
GI N+K NI+ A+ + S G +
Sbjct: 130 ---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYG--TEEYLHP 184
Query: 620 -----RGQYVSNQPGDGAKEDVYQLGVILLQVITGK-----QVKSTSEVDGLKLQLETCL 669
+Q GA D++ +GV TG + + +
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244
Query: 670 AEAPSKLRAEADPSVRGTYAY-------DSLRTTVEITI-NCLSKDAAKRPSIEDVL 718
+ A S ++ + + + L+ + + N L D K +
Sbjct: 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFF 301
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 7e-15
Identities = 33/186 (17%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFW---SLEVLNISSNFIYGEIPMEITSLKNLKS 176
+ L++L LSL + I+ SL N I P + ++ L S
Sbjct: 173 IANLTDLYSLSLNYNQI-----EDISPLASLTSLHYFTAYVNQITDITP--VANMTRLNS 225
Query: 177 IVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPS 234
+ + +N + + L L L L +G N ++ + + + +N + S
Sbjct: 226 LKIGNNKIT-DLSPLANLSQLTWLEIGTNQIS-DINAVKDLTKLKMLNVGSNQISD--IS 281
Query: 235 GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVE 294
L N QL +++N + L ++ L L+ N +++ P ++ +K++ +
Sbjct: 282 VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSAD 339
Query: 295 ISHNLL 300
++ ++
Sbjct: 340 FANQVI 345
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 2e-13
Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 14/178 (7%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
SLS N+N + L L++L + + P + L L I +N I
Sbjct: 180 YSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLS 237
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVI 222
P + +L L + + N ++ + ++ L L+ LN+G N L+ + S+
Sbjct: 238 P--LANLSQLTWLEIGTNQIS-DINAVKDLTKLKMLNVGSNQIS-DISVLNNLSQLNSLF 293
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSF--LFSLPSILYLNLAGNQLSE 278
L NN L +E + L +S N I L SL + + A + +
Sbjct: 294 LNNNQLGNEDMEVIGGLTNLTTLFLSQN----HITDIRPLASLSKMDSADFANQVIKK 347
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 2e-12
Identities = 37/189 (19%), Positives = 73/189 (38%), Gaps = 25/189 (13%)
Query: 131 LVSLGLWGPLPSKINRFW------SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLL 184
+L LP+ IN+ + + + + L+++ +V+A +
Sbjct: 2 AATLAT---LPAPINQIFPDADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKV 56
Query: 185 NGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSGLKNFDQL 242
S+ ++ L LE LNL GN LS + ++ + N + S L+N L
Sbjct: 57 A-SIQGIEYLTNLEYLNLNGNQIT-DISPLSNLVKLTNLYIGTNKI--TDISALQNLTNL 112
Query: 243 KQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL-- 300
++ ++ +N S L +L + LNL N +S LN++ ++ + +
Sbjct: 113 RELYLNEDNISDI--SPLANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESKVKD 169
Query: 301 ---IGKLPS 306
I L
Sbjct: 170 VTPIANLTD 178
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 2e-12
Identities = 31/188 (16%), Positives = 70/188 (37%), Gaps = 23/188 (12%)
Query: 120 LTKLSNLKVLSL-----VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNL 174
L+ L L L + + L + L L ++ + I P + +L +
Sbjct: 84 LSNLVKLTNLYIGTNKITDISALQNLTN-------LRELYLNEDNISDISP--LANLTKM 134
Query: 175 KSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEI 232
S+ L N + L + L L + + ++ ++ S+ L N +
Sbjct: 135 YSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVK-DVTPIANLTDLYSLSLNYNQIEDIS 193
Query: 233 PSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNF 292
P L + L F N + + ++ + L + N++++ P ++ ++L +
Sbjct: 194 P--LASLTSLHYFTAYVNQITDI--TPVANMTRLNSLKIGNNKITDLSP--LANLSQLTW 247
Query: 293 VEISHNLL 300
+EI N +
Sbjct: 248 LEIGTNQI 255
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 2e-14
Identities = 44/214 (20%), Positives = 90/214 (42%), Gaps = 41/214 (19%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
++G+G+ G +Y G L++ R+++K + + Q L + + L L+H+++V LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR----GVQ 572
+ + +E + GSL L + I T+ G++
Sbjct: 89 S--------ENGFIKIFMEQVPGGSLSALL----RSKWGPLKDNEQTIGFYTKQILEGLK 136
Query: 573 FLHTGVAPGIFGNNLKTENILLDKA----------LTAKLSGYNIPLPSKKGLESPLRGQ 622
+LH I ++K +N+L++ + +L+G N + G + Q
Sbjct: 137 YLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG--TL---Q 188
Query: 623 YVS------NQPGDGAKEDVYQLGVILLQVITGK 650
Y++ G G D++ LG ++++ TGK
Sbjct: 189 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 2e-14
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
+ L + N ++L KL+NL+ L + + P + +L+ L+++ N + +I
Sbjct: 180 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL-KDI 236
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVI 222
+ SL NL + LA+N ++ ++ L L L EL LG N L+ + ++
Sbjct: 237 G-TLASLTNLTDLDLANNQIS-NLAPLSGLTKLTELKLGANQIS-NISPLAGLTALTNLE 293
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282
L N L S + N L + NN S + SL + L N++S+
Sbjct: 294 LNENQLED--ISPISNLKNLTYLTLYFNNISDI--SPVSSLTKLQRLFFYNNKVSD--VS 347
Query: 283 NISCSAKLNFVEISHNLL 300
+++ +N++ HN +
Sbjct: 348 SLANLTNINWLSAGHNQI 365
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 7e-13
Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP 165
+++ + I++ FT T L+ L + + + L I +
Sbjct: 7 TITQDTPINQIFT-DTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI--KSI 61
Query: 166 MEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSK--NIVSVIL 223
+ L NL I ++N L + L+ L L ++ + N L+ N+ + L
Sbjct: 62 DGVEYLNNLTQINFSNNQLT-DITPLKNLTKLVDILMNNNQI-ADITPLANLTNLTGLTL 119
Query: 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVN 283
NN + P LKN L + ++SSN S L L S+ L+ GNQ+++ P
Sbjct: 120 FNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSF-GNQVTDLKP-- 172
Query: 284 ISCSAKLNFVEISHNLL-----IGKLPS 306
++ L ++IS N + + KL +
Sbjct: 173 LANLTTLERLDISSNKVSDISVLAKLTN 200
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 1e-11
Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 12/183 (6%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L+ L+ L L L + + P + +L L ++ N + P I++LKNL + L
Sbjct: 261 LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSGLK 237
N ++ + + L L+ L N SL+ NI + +N + P L
Sbjct: 317 YFNNIS-DISPVSSLTKLQRLFFYNNKVS-DVSSLANLTNINWLSAGHNQISDLTP--LA 372
Query: 238 NFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297
N ++ Q ++ + ++ + SI P IS +I+
Sbjct: 373 NLTRITQLGLNDQAWTNAPVNY-KANVSIPNTVKNVTGALI-APATISDGGSYTEPDITW 430
Query: 298 NLL 300
NL
Sbjct: 431 NLP 433
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 73.8 bits (181), Expect = 2e-14
Identities = 47/236 (19%), Positives = 79/236 (33%), Gaps = 26/236 (11%)
Query: 63 PSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLS-ANFNIDRFFTILT 121
V S + ELT+ + + +P P L+ N + L
Sbjct: 83 RILFGALRVLGISGLQELTLENLEVT-GTAPPPLLEATGPDLNILNLRNVSWATRDAWLA 141
Query: 122 KLSN-----LKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT----SLK 172
+L LKVLS+ ++ F +L L++S N GE +
Sbjct: 142 ELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFP 201
Query: 173 NLKSIVLADNLLNGSVPD-----LQRLVLLEELNLGGNDF----GPKFPSLSKNIVSVIL 223
L+ + L + + + V L+ L+L N G + S+ L
Sbjct: 202 TLQVLALRNAGME-TPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNL 260
Query: 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279
L+ +P GL +L D+S N LP + L+L GN ++
Sbjct: 261 SFTGLKQ-VPKGL--PAKLSVLDLSYNRLDRN--PSPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 58.4 bits (141), Expect = 3e-09
Identities = 33/216 (15%), Positives = 79/216 (36%), Gaps = 22/216 (10%)
Query: 117 FTILTKLSNLKVLSLVSLGLWGPLPSKINRFWS---LEVLNISSNFIYGEIPMEITSL-- 171
FT + K +LK L++ + + + R L+ L + + + G P +
Sbjct: 61 FTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATG 120
Query: 172 KNLKSIVLADNLLNG---SVPDLQRLVL--LEELNLGGNDFG---PKFPSLSKNIVSVIL 223
+L + L + + +LQ+ + L+ L++ + + + ++ L
Sbjct: 121 PDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDL 180
Query: 224 RNNSLRSEIP----SGLKNFDQLKQFDISSNNF---VGPIQSFLFSLPSILYLNLAGNQL 276
+N E F L+ + + G + + + L+L+ N L
Sbjct: 181 SDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSL 240
Query: 277 SEALPV-NISCSAKLNFVEISHNLLIGKLPSCIGSN 311
+A + ++LN + +S L ++P + +
Sbjct: 241 RDAAGAPSCDWPSQLNSLNLSFTGL-KQVPKGLPAK 275
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 8e-05
Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 17/185 (9%)
Query: 147 FWSLEVLNISSNFIYGEIPMEITSLKNLK-------SIVLADNLLNGSVPDLQRLVLLEE 199
+ L+ ++ ++ ++ SLK L S +L L + LQ L L E
Sbjct: 46 EYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTL-EN 104
Query: 200 LNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFD----QLKQFDISSNNFVGP 255
L + G P + ++ + LRN S + + LK I+ + +
Sbjct: 105 LEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNF 164
Query: 256 IQSFLFSLPSILYLNLAGNQLSEALPVNISCS----AKLNFVEISHNLLIGKLPSCIGSN 311
+ P++ L+L+ N + + L + + + + +
Sbjct: 165 SCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGM-ETPSGVCSAL 223
Query: 312 SLNRT 316
+ R
Sbjct: 224 AAARV 228
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 4e-14
Identities = 39/216 (18%), Positives = 74/216 (34%), Gaps = 34/216 (15%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
++G+G+ +++G G ++K + M+ E+L KL H+++V +
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA- 74
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
++ T L++E GSL L + L + + ++ G+ L
Sbjct: 75 ---IEEE--TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 576 TGVAPGIFGNNLKTENILLDKAL------------TAKLSGYNIPLPSKKGLESPL---- 619
GI N+K NI+ A+ + S G +
Sbjct: 130 ---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYG--TEEYLHP 184
Query: 620 -----RGQYVSNQPGDGAKEDVYQLGVILLQVITGK 650
+Q GA D++ +GV TG
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 75.1 bits (184), Expect = 4e-14
Identities = 42/219 (19%), Positives = 81/219 (36%), Gaps = 23/219 (10%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKL 504
+ ++ +G G G + + G +V++K + + ++++ KL
Sbjct: 10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL 69
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++VS + L +E+ G LR YL ++ LK ++
Sbjct: 70 NHPNVVSA--REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 127
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLD---KALTAKLS--GYNIPLPSKKGLE--- 616
+ +++LH I +LK ENI+L + L K+ GY L +
Sbjct: 128 SDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV 184
Query: 617 -SPLRGQYVS----NQPGDGAKEDVYQLGVILLQVITGK 650
+ QY++ Q D + G + + ITG
Sbjct: 185 GTL---QYLAPELLEQKKYTVTVDYWSFGTLAFECITGF 220
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 4e-14
Identities = 48/245 (19%), Positives = 89/245 (36%), Gaps = 34/245 (13%)
Query: 421 SRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVS 479
R P+T + + L E E + +G GS G++++ G + +
Sbjct: 28 QRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCA 87
Query: 480 VKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISN 539
VK + L ++ + + L +V + G G V + +E +
Sbjct: 88 VK-----KVRLEVFRVEELVACAGLSSPRIVPLYGAVR--------EGPWVNIFMELLEG 134
Query: 540 GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-L 598
GSL + L + + + A G+++LHT I ++K +N+LL
Sbjct: 135 GSLGQLIKQMGC---LPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGS 188
Query: 599 TAKLS--GYNIPLPSKKGLESPLRGQY-----------VSNQPGDGAKEDVYQLGVILLQ 645
A L G+ + L +S L G Y V AK D++ ++L
Sbjct: 189 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 248
Query: 646 VITGK 650
++ G
Sbjct: 249 MLNGC 253
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 74.5 bits (183), Expect = 5e-14
Identities = 36/188 (19%), Positives = 66/188 (35%), Gaps = 25/188 (13%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
+++ L + L LP+ L L +S N + +P+ L L
Sbjct: 60 PAHITTLVIPDNNL-TSLPALPP---ELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLT 114
Query: 183 LLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQL 242
L L +L + GN P L + + + +N L + +P+ L
Sbjct: 115 HLPALPSGLC------KLWIFGNQLT-SLPVLPPGLQELSVSDNQL-ASLPALPSE---L 163
Query: 243 KQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302
+ +N + S + L+++ NQL+ LP S +L + +N L
Sbjct: 164 CKLWAYNNQ----LTSLPMLPSGLQELSVSDNQLAS-LPTLPS---ELYKLWAYNNRLT- 214
Query: 303 KLPSCIGS 310
LP+
Sbjct: 215 SLPALPSG 222
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 3e-13
Identities = 47/223 (21%), Positives = 78/223 (34%), Gaps = 28/223 (12%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
Q LS + N + ++ S L L + L LP + L+ L++S N + +
Sbjct: 144 QELSVSDN--QLASLPALPSELCKLWAYNNQLTS-LPMLPS---GLQELSVSDNQL-ASL 196
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILR 224
P + L L +N L S+P L L+EL + GN P L + +++
Sbjct: 197 PTLPSELYKLW---AYNNRLT-SLPAL--PSGLKELIVSGNRLT-SLPVLPSELKELMVS 249
Query: 225 NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSF---LFSLPSILYLNLAGNQLSEALP 281
N L S +P L + N + L L S +NL GN LSE
Sbjct: 250 GNRLTS-LPMLPSG---LLSLSVYRNQ----LTRLPESLIHLSSETTVNLEGNPLSE-RT 300
Query: 282 VNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCL 324
+ ++ +I + + R +
Sbjct: 301 LQALR--EITSAPGYSGPIIRFDMAGASAPRETRALHLAAADW 341
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 8e-06
Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 10/146 (6%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
S LK L + L LP + L+ L +S N + +PM + L +L + N
Sbjct: 220 PSGLKELIVSGNRL-TSLPVLPS---ELKELMVSGNRL-TSLPMLPSGLLSLS---VYRN 271
Query: 183 LLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQ 241
L +P+ L L +NL GN + + I S + + +G +
Sbjct: 272 QLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRE 330
Query: 242 LKQFDISSNNFVGPIQSFLFSLPSIL 267
+ +++ +++ P + +
Sbjct: 331 TRALHLAAADWLVPAREGEPAPADRW 356
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 5e-04
Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 9/144 (6%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
+ L + N R ++ S LK L + L LP + L L++ N + +
Sbjct: 224 KELIVSGN--RLTSLPVLPSELKELMVSGNRL-TSLPMLPS---GLLSLSVYRNQL-TRL 276
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDL-QRLVLLEELNLGGNDFGPKFPSLSKNIVSVIL 223
P + L + ++ L N L+ + + + F S + ++ L
Sbjct: 277 PESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHL 336
Query: 224 -RNNSLRSEIPSGLKNFDQLKQFD 246
+ L D+ F
Sbjct: 337 AAADWLVPAREGEPAPADRWHMFG 360
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 8e-14
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G + G G++V+VKC+K Q+ + ++++LRH +LV +LG +
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIV- 256
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL---- 574
++ +++V E+++ GSL DYL + + +L + + +++L
Sbjct: 257 --EEKGG----LYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLEGNN 309
Query: 575 --HTGVAPGIFGNNLKTENILLDKALTAKLS 603
H +L N+L+ + AK+S
Sbjct: 310 FVH---------RDLAARNVLVSEDNVAKVS 331
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 3e-13
Identities = 37/201 (18%), Positives = 75/201 (37%), Gaps = 14/201 (6%)
Query: 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFI 160
+A Q L A+ + S K LG + SL + +++ +
Sbjct: 2 AAEQTGLKASQDNVNI-----PDSTFKAYLNGLLGQSSTANITEAQMNSLTYITLANINV 56
Query: 161 YGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG-PKFPSLS--KN 217
+E N+K + + + + + L LE L + G D K P+LS +
Sbjct: 57 TDLTGIE--YAHNIKDLTINNIHAT-NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTS 113
Query: 218 IVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277
+ + + +++ I + + ++ D+S N + I L +LP + LN+ + +
Sbjct: 114 LTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVH 172
Query: 278 EALPVNISCSAKLNFVEISHN 298
+ I KLN +
Sbjct: 173 DYRG--IEDFPKLNQLYAFSQ 191
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 4e-11
Identities = 29/147 (19%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
+ L+ N + ++ LSNL+ L ++ + ++ SL +L+IS + I
Sbjct: 69 KDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSI 128
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILR 224
+I +L + SI L+ N + L+ L L+ LN+ + +
Sbjct: 129 LTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFD-----------GVHDY--- 174
Query: 225 NNSLRSEIPSGLKNFDQLKQFDISSNN 251
G+++F +L Q S
Sbjct: 175 ---------RGIEDFPKLNQLYAFSQT 192
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 1e-09
Identities = 25/164 (15%), Positives = 64/164 (39%), Gaps = 17/164 (10%)
Query: 121 TKLSNLKVLSLVSLGLWGPLPSKI---NRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
++++L ++L ++ + + + +++ L I++ P I+ L NL+ +
Sbjct: 41 AQMNSLTYITLANINV-----TDLTGIEYAHNIKDLTINNIHATNYNP--ISGLSNLERL 93
Query: 178 VLADN-LLNGSVPDLQRLVLLEELNLGGNDF-GPKFPSLS--KNIVSVILRNNSLRSEIP 233
+ + + +P+L L L L++ + ++ + S+ L N ++I
Sbjct: 94 RIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI- 152
Query: 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277
LK +LK +I + + P + L +
Sbjct: 153 MPLKTLPELKSLNIQFDGVHD--YRGIEDFPKLNQLYAFSQTIG 194
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 1e-07
Identities = 17/142 (11%), Positives = 51/142 (35%), Gaps = 24/142 (16%)
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILR 224
+ + +L I LA+ + + ++ +++L + + +
Sbjct: 37 NITEAQMNSLTYITLANINVT-DLTGIEYAHNIKDLTINNI-----------HATNY--- 81
Query: 225 NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284
+ + L++ I + L L S+ L+++ + +++ I
Sbjct: 82 ---------NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKI 132
Query: 285 SCSAKLNFVEISHNLLIGKLPS 306
+ K+N +++S+N I +
Sbjct: 133 NTLPKVNSIDLSYNGAITDIMP 154
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 6e-05
Identities = 17/114 (14%), Positives = 45/114 (39%), Gaps = 4/114 (3%)
Query: 197 LEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI 256
LG + + ++ + L N ++ +G++ +K I++ +
Sbjct: 25 YLNGLLGQSSTANITEAQMNSLTYITLANINVTDL--TGIEYAHNIKDLTINNIHATNY- 81
Query: 257 QSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
+ + L ++ L + G ++ N+S L ++ISH+ + + I +
Sbjct: 82 -NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINT 134
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 4e-13
Identities = 37/200 (18%), Positives = 69/200 (34%), Gaps = 30/200 (15%)
Query: 119 ILTKLSNLKVL----------------SLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG 162
++L+ L SL + L S + ++E L+ S N I
Sbjct: 160 TFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSI-N 218
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDF----GPKFPSLSKNI 218
+ + L + L N L L L E++L N+ F + + +
Sbjct: 219 VVRGPV--NVELTILKLQHNNLT-DTAWLLNYPGLVEVDLSYNELEKIMYHPFVKM-QRL 274
Query: 219 VSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278
+ + NN L + + LK D+S N+ + ++ + L L N +
Sbjct: 275 ERLYISNNRL-VALNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVT 332
Query: 279 ALPVNISCSAKLNFVEISHN 298
+ +S L + +SHN
Sbjct: 333 ---LKLSTHHTLKNLTLSHN 349
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 7e-12
Identities = 38/206 (18%), Positives = 71/206 (34%), Gaps = 35/206 (16%)
Query: 119 ILTKLSNLKVLSL-------VSLGLWGPLPS--------------KINRFWSLEVLNISS 157
I L LS+ + + S ++ SL N+S
Sbjct: 136 IFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSY 195
Query: 158 NFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG--PKFPSLS 215
N + + ++ + + N +N V V L L L N+ +
Sbjct: 196 NLL-----STLAIPIAVEELDASHNSIN-VVRGPV-NVELTILKLQHNNLTDTAWLLNYP 248
Query: 216 KNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274
+V V L N L +I +L++ IS+N V + + +P++ L+L+ N
Sbjct: 249 -GLVEVDLSYNEL-EKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHN 305
Query: 275 QLSEALPVNISCSAKLNFVEISHNLL 300
L + N +L + + HN +
Sbjct: 306 HLLH-VERNQPQFDRLENLYLDHNSI 330
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 4e-11
Identities = 41/208 (19%), Positives = 81/208 (38%), Gaps = 38/208 (18%)
Query: 119 ILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TS 170
+ + L VL L + G++ P L L++S+N + I + +
Sbjct: 112 VFQNVPLLTVLVLERNDLSSLPRGIFHNTP-------KLTTLSMSNNNL-ERIEDDTFQA 163
Query: 171 LKNLKSIVLADNLLN----GSVPDLQRLVL-------------LEELNLGGNDFGPKFPS 213
+L+++ L+ N L +P L + +EEL+ N
Sbjct: 164 TTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP 223
Query: 214 LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLA 272
++ + + L++N+L + L N+ L + D+S N I F + + L ++
Sbjct: 224 VNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEK-IMYHPFVKMQRLERLYIS 280
Query: 273 GNQLSEALPVNISCSAKLNFVEISHNLL 300
N+L L + L +++SHN L
Sbjct: 281 NNRLVA-LNLYGQPIPTLKVLDLSHNHL 307
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 2e-09
Identities = 25/179 (13%), Positives = 60/179 (33%), Gaps = 21/179 (11%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
+ ++N + L ++ L + + + L +L + N + +
Sbjct: 189 FHANVSYN---LLSTLAIPIAVEELDASHNSI-NVVRGPV--NVELTILKLQHNNL-TDT 241
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN---DFGPKFPSLSKNIV 219
+ + L + L+ N L + ++ LE L + N + +
Sbjct: 242 A-WLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLVALNLYGQPIP-TLK 298
Query: 220 SVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAGNQLS 277
+ L +N L + FD+L+ + N+ V + + ++ L L+ N
Sbjct: 299 VLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKLSTH----HTLKNLTLSHNDWD 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 14/170 (8%)
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLL 197
+ S + ++I E +L N K + ++ + +P L +
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQV 71
Query: 198 EELNLGGNDFG--PK--FPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNF 252
E LNL F I + + N++ +P +N L + N+
Sbjct: 72 ELLNLNDLQIEEIDTYAFAYAH-TIQKLYMGFNAI-RYLPPHVFQNVPLLTVLVLERNDL 129
Query: 253 VGPIQSFLFS-LPSILYLNLAGNQLSEALPVNI-SCSAKLNFVEISHNLL 300
+ +F P + L+++ N L + + + L +++S N L
Sbjct: 130 SS-LPRGIFHNTPKLTTLSMSNNNLER-IEDDTFQATTSLQNLQLSSNRL 177
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 4e-13
Identities = 47/211 (22%), Positives = 75/211 (35%), Gaps = 34/211 (16%)
Query: 120 LTKLSNLKVLSLVSLGLWG----PLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLK 175
+++L + L L LP LE L S N + E+P SLK+L
Sbjct: 62 VSRLRDCLDRQAHELELNNLGLSSLPELPP---HLESLVASCNSL-TELPELPQSLKSLL 117
Query: 176 SIVLADNLLNG----------------SVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIV 219
L+ +P+LQ L+ +++ N K P L ++
Sbjct: 118 VDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSL-KKLPDLPPSLE 176
Query: 220 SVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279
+ NN L E+P L+N L +N+ ++ S+ + N L E
Sbjct: 177 FIAAGNNQL-EELPE-LQNLPFLTAIYADNNS----LKKLPDLPLSLESIVAGNNILEE- 229
Query: 280 LPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
LP + L + +NLL LP S
Sbjct: 230 LP-ELQNLPFLTTIYADNNLLK-TLPDLPPS 258
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 1e-11
Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 23/188 (12%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
+L+ + + L ++ L + +N + +P SL+ L + DN
Sbjct: 214 PLSLESIVAGNNIL--EELPELQNLPFLTTIYADNNLL-KTLPDLPPSLEAL---NVRDN 267
Query: 183 LLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQL 242
L Q L L+ + L N+ + +N + + + L
Sbjct: 268 YLTDLPELPQSLTFLDVSENIFS----GLSELPPNLYYLNASSNEI-RSLCDLPPS---L 319
Query: 243 KQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302
++ ++S+N + P + L + N L+E +P L + + +N L
Sbjct: 320 EELNVSNNK----LIELPALPPRLERLIASFNHLAE-VPELPQ---NLKQLHVEYNPLR- 370
Query: 303 KLPSCIGS 310
+ P S
Sbjct: 371 EFPDIPES 378
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 6e-10
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 29/177 (16%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP----DLQRLVL-------- 196
L+ S+ + E+P+E ++K+ A + + P + + + +
Sbjct: 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD 70
Query: 197 --LEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254
EL L P L ++ S++ NSL +E+P ++ L + +
Sbjct: 71 RQAHELELNNLGLS-SLPELPPHLESLVASCNSL-TELPELPQSLKSLLVDNNNLKA--- 125
Query: 255 PIQSFLFSLPSIL-YLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
L LP +L YL ++ NQL + LP + S+ L +++ +N L KLP S
Sbjct: 126 -----LSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLK-KLPDLPPS 174
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 9e-10
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 21/178 (11%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
NL L+ S + L SLE LN+S+N + E+P L+ L + + N
Sbjct: 296 PPNLYYLNASSNEI-RSLCDLPP---SLEELNVSNNKLI-ELPALPPRLERL---IASFN 347
Query: 183 LLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQL 242
L VP+L L++L++ N +FP + +++ LR NS +E+P +N L
Sbjct: 348 HLA-EVPEL--PQNLKQLHVEYNPL-REFPDIPESVED--LRMNSHLAEVPELPQN---L 398
Query: 243 KQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
KQ + +N P++ F S+ L + ++ + + KL H+
Sbjct: 399 KQLHVETN----PLREFPDIPESVEDLRMNSERVVDPYEFAHETTDKLEDDVFEHHHH 452
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 4e-13
Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 16/198 (8%)
Query: 104 QQSLSANFNIDRFFTI-LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG 162
++A F + TI +L+ L L + + + I + L L +SN I
Sbjct: 21 ASEVAAAFEMQATDTISEEQLATLTSLDCHNSSI-TDMTG-IEKLTGLTKLICTSNNI-T 77
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI 222
+ ++ NL + N L + D+ L L LN N S + + +
Sbjct: 78 TLD--LSQNTNLTYLACDSNKL--TNLDVTPLTKLTYLNCDTNKLTKLDVSQNPLLTYLN 133
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282
N+L +EI + + QL + D N + + + + L+ + N+++E +
Sbjct: 134 CARNTL-TEID--VSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITE---L 185
Query: 283 NISCSAKLNFVEISHNLL 300
++S + LN + N +
Sbjct: 186 DVSQNKLLNRLNCDTNNI 203
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 3e-09
Identities = 35/224 (15%), Positives = 71/224 (31%), Gaps = 23/224 (10%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
+T L+ L L L ++ L L+ + EI +T L
Sbjct: 229 VTPLTQLTYFDCSVNPL-TELD--VSTLSKLTTLHCIQTDLL-EID--LTHNTQLIYFQA 282
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNF 239
D+ L L+ S + +V + L N L +E+ + +
Sbjct: 283 EGCRKI-KELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTEL-TELD--VSHN 338
Query: 240 DQLKQFDISSNNFVGPIQSF--LFSLPSILYLNLAGNQLSEALPVNISC-----SAKLNF 292
+LK + + IQ F + +P++ A Q ++ + +
Sbjct: 339 TKLKSLSCVNAH----IQDFSSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDL 394
Query: 293 VEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQHPYS 336
++ N + + + T+ TW LS N + ++
Sbjct: 395 LDQFGNPMNIEPGDGGVYDQATNTI--TWENLSTDNPAVTYTFT 436
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 6e-08
Identities = 40/195 (20%), Positives = 77/195 (39%), Gaps = 27/195 (13%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKIN--RFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
+++ L L+ + + +K++ + L L+ SSN + EI +T L L
Sbjct: 187 VSQNKLLNRLNCDTNNI-----TKLDLNQNIQLTFLDCSSNKLT-EID--VTPLTQLTYF 238
Query: 178 VLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLK 237
+ N L + D+ L L L+ D L+ N + + R +
Sbjct: 239 DCSVNPL--TELDVSTLSKLTTLHCIQTDLLEI--DLTHNTQLIYFQAEGCRKIKELDVT 294
Query: 238 NFDQLKQFDISSNNFVGPIQSF-LFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS 296
+ QL D + I L P ++YL L +L+E +++S + KL +
Sbjct: 295 HNTQLYLLDCQAAG----ITELDLSQNPKLVYLYLNNTELTE---LDVSHNTKLKSLSCV 347
Query: 297 HNLL-----IGKLPS 306
+ + +GK+P+
Sbjct: 348 NAHIQDFSSVGKIPA 362
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 5e-13
Identities = 28/153 (18%), Positives = 61/153 (39%), Gaps = 26/153 (16%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
+G G G+++ ++V+VK +K ++ + ++ L+H LV +
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL-- 574
T ++++ E ++ GSL D+L + P+ + G+ F+
Sbjct: 253 ---------TKEPIYIITEFMAKGSLLDFLKS-DEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 575 ----HTGVAPGIFGNNLKTENILLDKALTAKLS 603
H +L+ NIL+ +L K++
Sbjct: 303 RNYIH---------RDLRAANILVSASLVCKIA 326
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 6e-13
Identities = 31/146 (21%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 434 GLPPFRGFSLEEIEEATNNFDPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQR 488
+ F + L IG+G G + G G++V+VKC+K
Sbjct: 4 SVAAQDEFYRSGWA-----LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIK--ND 55
Query: 489 HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD 548
Q+ + ++++LRH +LV +LG + ++ +++V E+++ GSL DYL
Sbjct: 56 ATAQAFLAEASVMTQLRHSNLVQLLGVIV---EEKG----GLYIVTEYMAKGSLVDYLRS 108
Query: 549 WKKKDMLKWPQRMAIIIGATRGVQFL 574
+ + +L + + +++L
Sbjct: 109 -RGRSVLGGDCLLKFSLDVCEAMEYL 133
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 6e-13
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 24/152 (15%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
+ +++V E++S GSL D+L + L+ PQ + + G+ ++
Sbjct: 249 ---------SEEPIYIVTEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 577 GVAPGIFGNN-----LKTENILLDKALTAKLS 603
N L+ NIL+ + L K++
Sbjct: 299 --------MNYVHRDLRAANILVGENLVCKVA 322
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 9e-13
Identities = 47/248 (18%), Positives = 90/248 (36%), Gaps = 15/248 (6%)
Query: 118 TILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
L+VL L + L L ++ N I + L +L+ +
Sbjct: 46 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105
Query: 178 VLADNLLNGSVPD--LQRLVLLEELNLGGN-----DFGPKFPSLSKNIVSVILRNNSLRS 230
V + L S+ + + L L+ELN+ N F +L+ N+ + L +N ++S
Sbjct: 106 VAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLT-NLEHLDLSSNKIQS 163
Query: 231 EIPSGLKNFDQLKQFDIS---SNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287
+ L+ Q+ ++S S N + IQ F + L L N S + C
Sbjct: 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKT--CI 221
Query: 288 AKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKP 347
L +E+ H L++G+ + +++ + L+ + + +
Sbjct: 222 QGLAGLEV-HRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNC 280
Query: 348 PVNVKSDD 355
NV S
Sbjct: 281 LTNVSSFS 288
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 9e-13
Identities = 43/237 (18%), Positives = 77/237 (32%), Gaps = 16/237 (6%)
Query: 72 CTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSL 131
N + E + + S SL + + + L L
Sbjct: 254 LCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTI--ERVKDFSYNFGWQHLEL 311
Query: 132 VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGS---V 188
V+ G P+ + SL+ L +SN L +L+ + L+ N L+
Sbjct: 312 VNCKF-GQFPT--LKLKSLKRLTFTSNKGGNAFS--EVDLPSLEFLDLSRNGLSFKGCCS 366
Query: 189 PDLQRLVLLEELNLGGN---DFGPKFPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQ 244
L+ L+L N F L + + ++++L+ + L
Sbjct: 367 QSDFGTTSLKYLDLSFNGVITMSSNFLGLE-QLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425
Query: 245 FDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI-SCSAKLNFVEISHNLL 300
DIS + L S+ L +AGN E +I + L F+++S L
Sbjct: 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 482
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 9e-11
Identities = 37/205 (18%), Positives = 65/205 (31%), Gaps = 33/205 (16%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLV--SLGLWGPLPSKINRFWSLEVLNISSNFIYG 162
+ L+ N L +L+ L L L G SL+ L++S N +
Sbjct: 328 KRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI- 386
Query: 163 EIPMEITSLKNLKSIVLADNLLNG--------SVPDLQRLVL------------------ 196
+ L+ L+ + + L S+ +L L +
Sbjct: 387 TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 446
Query: 197 LEELNLGGNDFGPKFPSLS----KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNF 252
LE L + GN F F +N+ + L L P+ + L+ +++SN
Sbjct: 447 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL 506
Query: 253 VGPIQSFLFSLPSILYLNLAGNQLS 277
L S+ + L N
Sbjct: 507 KSVPDGIFDRLTSLQKIWLHTNPWD 531
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 9e-08
Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 25/163 (15%)
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLE 198
+P + +S + L++S N + S L+ + L+ + Q L L
Sbjct: 22 IPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLS 79
Query: 199 ELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS 258
L L N ++S L++ N
Sbjct: 80 TLILT---------------------GNPIQSLALGAFSGLSSLQKLVAVETNLASLENF 118
Query: 259 FLFSLPSILYLNLAGNQLSE-ALPVNISCSAKLNFVEISHNLL 300
+ L ++ LN+A N + LP S L +++S N +
Sbjct: 119 PIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 6e-04
Identities = 20/139 (14%), Positives = 41/139 (29%), Gaps = 24/139 (17%)
Query: 163 EIPMEITSLKNLKSIVLADNLLNG-SVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSV 221
+IP + + K++ L+ N L L+ L+L
Sbjct: 21 KIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLS------------------ 60
Query: 222 ILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALP 281
+++ ++ L ++ N L S+ L L+
Sbjct: 61 ---RCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLEN 117
Query: 282 VNISCSAKLNFVEISHNLL 300
I L + ++HNL+
Sbjct: 118 FPIGHLKTLKELNVAHNLI 136
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 1e-12
Identities = 55/336 (16%), Positives = 107/336 (31%), Gaps = 65/336 (19%)
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSN 158
+LS N + + + L + + L + + L L+ L++ N
Sbjct: 320 NLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEK-------LQTLDLRDN 372
Query: 159 FIYGEIPMEITSLKNLKSIVLADNLL----------------------NGSVPDLQRLVL 196
+ I + ++ I L+ N L + L R+
Sbjct: 373 AL-----TTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPH 427
Query: 197 LEELNLGGNDF----GPKFPSLSKNIVSVILRNNSLRSEIPSGL-----KNFDQLKQFDI 247
L+ L L N F G + PS + ++ + L N L+ + L + L+ +
Sbjct: 428 LQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYL 487
Query: 248 SSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL------- 300
+ N L ++ L+L N+L+ L N A L ++IS N L
Sbjct: 488 NHNYLNSLPPGVFSHLTALRGLSLNSNRLTV-LSHN-DLPANLEILDISRNQLLAPNPDV 545
Query: 301 IGKLPS-CIGSNSLNRTVVSTW--NCLSGVNTKYQHP---YSFCRKEALAVKPPVNVKSD 354
L I N + N L+ N P ++ + ++ ++
Sbjct: 546 FVSLSVLDITHNKFICECELSTFINWLNHTNVTIAGPPADIYCVYPDSFSGVSLFSLSTE 605
Query: 355 DEQSTRVDVGLILGIIGGVVGFVVVFGLLVLVVIRR 390
V L + + +F + +L V +
Sbjct: 606 GCDEEEVLKSLKFSLFIVCTVTLTLFLMTILTVTKF 641
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 6e-11
Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 10/172 (5%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGND 206
+ E L +S N+I L+ L+ + L ++ + L L L+LG +
Sbjct: 25 TTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84
Query: 207 ---FGPKFPSLSKNIVSVILRNNSLRSEI--PSGLKNFDQLKQFDISSNNFVG-PIQSFL 260
P ++ + L L + +N L + D+S N +
Sbjct: 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSF 144
Query: 261 FSLPSILYLNLAGNQLSEALPVNIS--CSAKLNFVEISHNLLIGKLPSCIGS 310
L S+ ++ + NQ+ + L+F ++ N L ++ G
Sbjct: 145 GKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGK 196
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 4e-09
Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 31/208 (14%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI--PMEITSLKNLKSIVLA 180
L NL++L L S ++ P + L L + + + +LK L + L+
Sbjct: 72 LPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLS 131
Query: 181 DNLLN--GSVPDLQRLVLLEELNLGGNDF----GPKFPSLS-KNIVSVILRNNSLRSEIP 233
N + P +L L+ ++ N + L K + L NSL S +
Sbjct: 132 KNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVS 191
Query: 234 SGLKNFDQ------LKQFDISSNNFVGPIQS------------FLFSLPSILYLNLAGNQ 275
L+ D+S N + I L I+ +
Sbjct: 192 VDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251
Query: 276 LSEALPVNI---SCSAKLNFVEISHNLL 300
+ + N + + +++SH +
Sbjct: 252 IKD-PDQNTFAGLARSSVRHLDLSHGFV 278
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 6e-08
Identities = 39/239 (16%), Positives = 75/239 (31%), Gaps = 39/239 (16%)
Query: 99 KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFW--SLEVLNIS 156
++ +N L ++ + P + S+ L++S
Sbjct: 215 GWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLS 274
Query: 157 SNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKFPSL 214
F++ +LK+LK + LA N +N + D L L+ LNL N
Sbjct: 275 HGFVFSLNSRVFETLKDLKVLNLAYNKIN-KIADEAFYGLDNLQVLNLSYNLL------- 326
Query: 215 SKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAG 273
E+ S ++ D+ N+ L + L+L
Sbjct: 327 ---------------GELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRD 371
Query: 274 NQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVS-TWNCLSGVNTKY 331
N L+ I + + +S N L + +L ++ + N L ++ Y
Sbjct: 372 NALTT-----IHFIPSIPDIFLSGNKL-----VTLPKINLTANLIHLSENRLENLDILY 420
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 27/131 (20%), Positives = 43/131 (32%), Gaps = 12/131 (9%)
Query: 179 LADNLLNG--SVPDLQRLVLLEELNLGGNDF----GPKFPSLSKNIVSVILRNNSLRSEI 232
+A VP Q L E L L N FP L + + L + I
Sbjct: 8 IAFYRFCNLTQVP--QVLNTTERLLLSFNYIRTVTASSFPFLE-QLQLLELGSQYTPLTI 64
Query: 233 PSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS--AK 289
+N L+ D+ S+ L + L L LS+A+ +
Sbjct: 65 DKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKA 124
Query: 290 LNFVEISHNLL 300
L +++S N +
Sbjct: 125 LTRLDLSKNQI 135
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 1e-12
Identities = 53/323 (16%), Positives = 108/323 (33%), Gaps = 83/323 (25%)
Query: 434 GLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGS-RVSVKCLKLKQ-RHLP 491
G+ R ++ + IG G+ G+++ G L + V+VK + L
Sbjct: 97 GVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK 156
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+Q +L + H ++V ++G C Q P +++V+E + G +L +
Sbjct: 157 AKFLQEARILKQYSHPNIVRLIGVCT---QKQP-----IYIVMELVQGGDFLTFLR--TE 206
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN-----LKTENILLDKALTAKLS--- 603
L+ + ++ A G+++L + L N L+ + K+S
Sbjct: 207 GARLRVKTLLQMVGDAAAGMEYLES--------KCCIHRDLAARNCLVTEKNVLKISDFG 258
Query: 604 --------GYNIPLPSKKGL-------ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT 648
Y ++ + E+ G+Y S + DV+ G++L + +
Sbjct: 259 MSREEADGVYAASGGLRQ-VPVKWTAPEALNYGRYSS-------ESDVWSFGILLWETFS 310
Query: 649 GKQV----KSTSEV-----DGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEI 699
S + G +L C P + +
Sbjct: 311 LGASPYPNLSNQQTREFVEKGGRLP---CPELCPDAV--------------------FRL 347
Query: 700 TINCLSKDAAKRPSIEDVLWNLQ 722
C + + +RPS + LQ
Sbjct: 348 MEQCWAYEPGQRPSFSTIYQELQ 370
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 64/323 (19%), Positives = 104/323 (32%), Gaps = 60/323 (18%)
Query: 413 GSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF- 471
+P S R + + G P R S + +F + +G GS G+++K
Sbjct: 24 HQLQPRRVSFRGEASETLQSPGYDPSRPESFFQ-----QSFQRLSRLGHGSYGEVFKVRS 78
Query: 472 LTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGS 528
DG +VK R + V K+ +H V + G
Sbjct: 79 KEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVR--------LEQAWEEGG 130
Query: 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588
++L E SL+ + W L Q + + LH+ G+ ++K
Sbjct: 131 ILYLQTEL-CGPSLQQHCEAWGAS--LPEAQVWGYLRDTLLALAHLHS---QGLVHLDVK 184
Query: 589 TENILLDKALTAKLS--GYNIPLPSKKGLE---------SP--LRGQYVSNQPGDGAKED 635
NI L KL G + L + E +P L+G Y G D
Sbjct: 185 PANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSY-------GTAAD 237
Query: 636 VYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRT 695
V+ LG+ +L+V ++ E +LR P LR+
Sbjct: 238 VFSLGLTILEVACNMELPHG--------------GEGWQQLRQGYLPPEFTAGLSSELRS 283
Query: 696 TVEITINCLSKDAAKRPSIEDVL 718
+ L D R + E +L
Sbjct: 284 VLV---MMLEPDPKLRATAEALL 303
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 2e-12
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 24/152 (15%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
+ +++V E++S GSL D+L + L+ PQ + + G+ ++
Sbjct: 332 ---------SEEPIYIVTEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 577 GVAPGIFGNN-----LKTENILLDKALTAKLS 603
N L+ NIL+ + L K++
Sbjct: 382 --------MNYVHRDLRAANILVGENLVCKVA 405
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 2e-12
Identities = 30/153 (19%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 457 NLIGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
+ +G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
C ++ P +++ E ++ G+L DYL + + + + + + +++L
Sbjct: 285 CT---REPP-----FYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 576 TGVAPGIFGNN-----LKTENILLDKALTAKLS 603
N L N L+ + K++
Sbjct: 336 K--------KNFIHRNLAARNCLVGENHLVKVA 360
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 6e-12
Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 32/157 (20%)
Query: 459 IGEGSQGQLYKGFLTDGSR-----VSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLVSI 512
+G G+ G +YKG V++K L+ + ++ +++ + + H+ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
LG C STV L+ + + G L DY+ + KD + + + +G+
Sbjct: 83 LGIC---------LTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMN 131
Query: 573 FL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+L H +L N+L+ K++
Sbjct: 132 YLEDRRLVH---------RDLAARNVLVKTPQHVKIT 159
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 68.0 bits (166), Expect = 6e-12
Identities = 39/190 (20%), Positives = 76/190 (40%), Gaps = 26/190 (13%)
Query: 119 ILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSL 171
I L LS+ + + S L+ L +SSN + + ++ +
Sbjct: 142 IFHNTPKLTTLSMSNNNLERIEDDTFQATTS-------LQNLQLSSNRL-THVD--LSLI 191
Query: 172 KNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSE 231
+L ++ NLL+ L + +EEL+ N ++ + + L++N+L
Sbjct: 192 PSLFHANVSYNLLS----TLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD- 246
Query: 232 IPSGLKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNISCSAKL 290
+ L N+ L + D+S N I F + + L ++ N+L L + L
Sbjct: 247 -TAWLLNYPGLVEVDLSYNELEK-IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTL 303
Query: 291 NFVEISHNLL 300
+++SHN L
Sbjct: 304 KVLDLSHNHL 313
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 2e-09
Identities = 37/209 (17%), Positives = 80/209 (38%), Gaps = 18/209 (8%)
Query: 103 SQQSLSANFNIDRFFTILTKLSN---LKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNF 159
QQ + + I + L + + + + +++ ++
Sbjct: 3 GQQRYNVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNST 62
Query: 160 IYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN---DFGPKFPS 213
+ ++P + S + ++ + L D + + +++L +G N P
Sbjct: 63 MR-KLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQ 120
Query: 214 LSKNIVSVILRNNSLRSEIPSGL-KNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNL 271
+ ++L N L S +P G+ N +L +S+NN I+ F S+ L L
Sbjct: 121 NVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLER-IEDDTFQATTSLQNLQL 178
Query: 272 AGNQLSEALPVNISCSAKLNFVEISHNLL 300
+ N+L+ V++S L +S+NLL
Sbjct: 179 SSNRLTH---VDLSLIPSLFHANVSYNLL 204
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 1e-05
Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 16/139 (11%)
Query: 120 LTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLK 172
L L + L + + + LE L IS+N + + + +
Sbjct: 250 LLNYPGLVEVDLSYNELEKIMYHPFVKMQR-------LERLYISNNRL-VALNLYGQPIP 301
Query: 173 NLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLR-SE 231
LK + L+ N L + + LE L L N S + ++ L +N +
Sbjct: 302 TLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNS 361
Query: 232 IPSGLKNFDQLKQFDISSN 250
+ + +N + D +
Sbjct: 362 LRALFRNVARPAVDDADQH 380
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 6e-12
Identities = 50/303 (16%), Positives = 101/303 (33%), Gaps = 81/303 (26%)
Query: 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLV 510
+F P +++G G++G + + D V+VK + + + V+LL + H +++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSF---ADREVQLLRESDEHPNVI 81
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
T +D ++ +E + +L++Y+ +K + + ++ T G
Sbjct: 82 RYFC----TEKDRQF----QYIAIELCA-ATLQEYVE--QKDFAHLGLEPITLLQQTTSG 130
Query: 571 VQFLHTGVAPGIFGNNLKTENILL-----DKALTAKLS------------GYNIPLPSKK 613
+ LH + I +LK NIL+ + A +S
Sbjct: 131 LAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 614 G---------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQ 664
G L + D++ G + VI+
Sbjct: 188 GTEGWIAPEMLSEDCKENP-------TYTVDIFSAGCVFYYVISEG-------------- 226
Query: 665 LETCLAEAP--SKLRAEADPSVRGTYAYDSLRTTVEITI-------NCLSKDAAKRPSIE 715
P L+ +A+ + G + D L + ++ D KRPS +
Sbjct: 227 ------SHPFGKSLQRQAN-ILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAK 279
Query: 716 DVL 718
VL
Sbjct: 280 HVL 282
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 8e-12
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 43/212 (20%)
Query: 459 IGEGSQGQLYKGF--LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSIL 513
IG+G+ ++ LT G V++K + +L L + L + V ++ L H ++V +
Sbjct: 23 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQK-LFREVRIMKILNHPNIVKLF 80
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI---IIGATRG 570
I T T++L++E+ S G + DYL +K + + I+ A
Sbjct: 81 -EVI-------ETEKTLYLIMEYASGGEVFDYLV---AHGRMKEKEARSKFRQIVSA--- 126
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY---NIPLPSKKGLE----SPLRGQY 623
VQ+ H I +LK EN+LLD + K++ + N K L+ +P Y
Sbjct: 127 VQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-LDAFCGAPP---Y 179
Query: 624 -----VSNQPGDGAKEDVYQLGVILLQVITGK 650
+ DG + DV+ LGVIL +++G
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 211
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 67.4 bits (164), Expect = 9e-12
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 19/201 (9%)
Query: 104 QQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGE 163
++++ + I + F + +L + + N S++ + +++ I
Sbjct: 2 GETITVSTPIKQIFP-DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDI-KS 57
Query: 164 IPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSV 221
+ I L N+ + L N L + L L L L L N SL K + S+
Sbjct: 58 VQ-GIQYLPNVTKLFLNGNKLT-DIKPLTNLKNLGWLFLDENKIK-DLSSLKDLKKLKSL 114
Query: 222 ILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ--SFLFSLPSILYLNLAGNQLSEA 279
L +N + S+I +GL + QL+ + +N I + L L + L+L NQ+S+
Sbjct: 115 SLEHNGI-SDI-NGLVHLPQLESLYLGNNK----ITDITVLSRLTKLDTLSLEDNQISDI 168
Query: 280 LPVNISCSAKLNFVEISHNLL 300
+P ++ KL + +S N +
Sbjct: 169 VP--LAGLTKLQNLYLSKNHI 187
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 63.6 bits (154), Expect = 1e-10
Identities = 40/201 (19%), Positives = 69/201 (34%), Gaps = 18/201 (8%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKI---NRFWSLEVLNISSNFIY 161
L N N LT L NL L L + + L+ L++ N I
Sbjct: 68 TKLFLNGNKLTDIKPLTNLKNLGWLFLDENKI-----KDLSSLKDLKKLKSLSLEHNGI- 121
Query: 162 GEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSK--NIV 219
+I + L L+S+ L +N + + L RL L+ L+L N L+ +
Sbjct: 122 SDIN-GLVHLPQLESLYLGNNKIT-DITVLSRLTKLDTLSLEDNQIS-DIVPLAGLTKLQ 178
Query: 220 SVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279
++ L N + S++ L L ++ S + + +L + L
Sbjct: 179 NLYLSKNHI-SDL-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVT- 235
Query: 280 LPVNISCSAKLNFVEISHNLL 300
P IS + +L
Sbjct: 236 -PEIISDDGDYEKPNVKWHLP 255
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 47.8 bits (113), Expect = 1e-05
Identities = 17/129 (13%), Positives = 48/129 (37%), Gaps = 14/129 (10%)
Query: 174 LKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSE 231
+ + + + + NL + + +I +I N+ ++S
Sbjct: 1 MGETITVSTPIK-QIFPDDAFAETIKDNLKKKSVT-DAVTQNELNSIDQIIANNSDIKS- 57
Query: 232 IPSGLKNFDQLKQFDISSNNFVGPIQSF--LFSLPSILYLNLAGNQLSEALPVNISCSAK 289
+ G++ + + ++ N + L +L ++ +L L N++ + ++ K
Sbjct: 58 V-QGIQYLPNVTKLFLNGNK----LTDIKPLTNLKNLGWLFLDENKIKDL--SSLKDLKK 110
Query: 290 LNFVEISHN 298
L + + HN
Sbjct: 111 LKSLSLEHN 119
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 66.2 bits (161), Expect = 1e-11
Identities = 32/366 (8%), Positives = 86/366 (23%), Gaps = 67/366 (18%)
Query: 389 RRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEE 448
R + G ++ + A + + + + T+ S R L E
Sbjct: 17 REEELIGYCREEALKEPAAMVEAVTAT---VWPQNAETTVDSLLSQGE--RKLKLVE--- 68
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQ---SLMQHVELLSKL 504
+ G + ++ + ++K + + L + ++L
Sbjct: 69 ---------PLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARL 119
Query: 505 RHRHLVSILGHC-------ILTYQDHPN-----------TGSTVFLVLEHISNGSLRDYL 546
+ Q P + L++ S L
Sbjct: 120 LGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLF 178
Query: 547 TDWKKKDMLKWP----QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+ + + + R L + G+ + +N+ + L
Sbjct: 179 STLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLML 235
Query: 603 SGYNIPLPSKKGLESPLRGQYV-------SNQPGDGAKEDVYQLGVILLQVITGK---QV 652
+ + ++ + +QLG+ + +V +
Sbjct: 236 GDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295
Query: 653 KSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP 712
+ K + D ++T + L+ D +R
Sbjct: 296 VTPGIKGSWKRPSLRVPGTDSLAFGSCTPLP-------DFVKTLIG---RFLNFDRRRRL 345
Query: 713 SIEDVL 718
+ +
Sbjct: 346 LPLEAM 351
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 1e-11
Identities = 40/178 (22%), Positives = 70/178 (39%), Gaps = 36/178 (20%)
Query: 442 SLEEIEEATNNFDPTNL------IGEGSQGQLYKGFLTDGSR---VSVKCLK--LKQRHL 490
+LEEI D L +G G+ G + KG+ V+VK LK L
Sbjct: 2 ALEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 61
Query: 491 PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK 550
L+ ++ +L + ++V ++G C + LV+E G L YL +
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGIC---------EAESWMLVMEMAELGPLNKYL---Q 109
Query: 551 KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
+ +K + ++ + G+++L +N L N+LL AK+S
Sbjct: 110 QNRHVKDKNIIELVHQVSMGMKYLEE--------SNFVHRDLAARNVLLVTQHYAKIS 159
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 1e-11
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 26/151 (17%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 77
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL---- 574
T ++++ E++ NGSL D+L L + + + G+ F+
Sbjct: 78 -------TQEPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 575 --HTGVAPGIFGNNLKTENILLDKALTAKLS 603
H +L+ NIL+ L+ K++
Sbjct: 130 YIH---------RDLRAANILVSDTLSCKIA 151
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 1e-11
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 26/193 (13%)
Query: 123 LSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNL 174
L NL+ L L + LG++ L + L L+IS N I + + L NL
Sbjct: 79 LFNLRTLGLRSNRLKLIPLGVFTGLSN-------LTKLDISENKI-VILLDYMFQDLYNL 130
Query: 175 KSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFG--PK--FPSLSKNIVSVILRNNSL 228
KS+ + DN L + L LE+L L + P L ++ + LR+ ++
Sbjct: 131 KSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLH-GLIVLRLRHLNI 188
Query: 229 RSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287
+ I K +LK +IS ++ + ++ L++ L+ + +
Sbjct: 189 -NAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL 247
Query: 288 AKLNFVEISHNLL 300
L F+ +S+N +
Sbjct: 248 VYLRFLNLSYNPI 260
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 2e-09
Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 14/167 (8%)
Query: 149 SLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN 205
LE L ++ N + + +L NL+++ L N L +P L L +L++ N
Sbjct: 57 HLEELELNENIV-SAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISEN 114
Query: 206 ---DFGPK-FPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFL 260
F L N+ S+ + +N L I + L+Q + N I +
Sbjct: 115 KIVILLDYMFQDLY-NLKSLEVGDNDL-VYISHRAFSGLNSLEQLTLEKCNLTS-IPTEA 171
Query: 261 FS-LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPS 306
S L ++ L L ++ + +L +EISH + +
Sbjct: 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTP 218
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 2e-09
Identities = 37/195 (18%), Positives = 70/195 (35%), Gaps = 28/195 (14%)
Query: 123 LSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNL 174
L++L+ L+L + L L VL + I I L L
Sbjct: 151 LNSLEQLTLEKCNLTSIPTEALSHLHG-------LIVLRLRHLNIN-AIRDYSFKRLYRL 202
Query: 175 KSIVLAD-NLLNGSVPDLQRLVLLEELNLGGNDFG--PK--FPSLSKNIVSVILRNNSLR 229
K + ++ L+ P+ + L L++ + P L + + L N +
Sbjct: 203 KVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLV-YLRFLNLSYNPI- 260
Query: 230 SEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNI-SC 286
S I L +L++ + ++ + F L + LN++GNQL+ L ++
Sbjct: 261 STIEGSMLHELLRLQEIQLVGGQLAV-VEPYAFRGLNYLRVLNVSGNQLT-TLEESVFHS 318
Query: 287 SAKLNFVEISHNLLI 301
L + + N L
Sbjct: 319 VGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 7e-06
Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 12/142 (8%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPME-ITSLKNLKSIV 178
+L LKVL + + +L L+I+ + +P + L L+ +
Sbjct: 196 FKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNL-TAVPYLAVRHLVYLRFLN 254
Query: 179 LADNLLNGSVPD--LQRLVLLEELNLGGN---DFGPK-FPSLSKNIVSVILRNNSLRSEI 232
L+ N ++ ++ L L+ L+E+ L G P F L+ + + + N L + +
Sbjct: 255 LSYNPIS-TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLN-YLRVLNVSGNQLTT-L 311
Query: 233 PSGL-KNFDQLKQFDISSNNFV 253
+ + L+ + SN
Sbjct: 312 EESVFHSVGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 1e-05
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGN---DFGPK-FPSLSK 216
+P I + + L N + ++ + LEEL L N P F +L
Sbjct: 25 AVPEGI--PTETRLLDLGKNRI-KTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLF- 80
Query: 217 NIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGN 274
N+ ++ LR+N L IP G L + DIS N V + ++F L ++ L + N
Sbjct: 81 NLRTLGLRSNRL-KLIPLGVFTGLSNLTKLDISENKIVI-LLDYMFQDLYNLKSLEVGDN 138
Query: 275 QLSE 278
L
Sbjct: 139 DLVY 142
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 9e-05
Identities = 17/91 (18%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 212 PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLN 270
+ + L N +++ +F L++ +++ N V ++ F+ L ++ L
Sbjct: 28 EGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENI-VSAVEPGAFNNLFNLRTLG 86
Query: 271 LAGNQLSEALPVNI-SCSAKLNFVEISHNLL 300
L N+L +P+ + + + L ++IS N +
Sbjct: 87 LRSNRLKL-IPLGVFTGLSNLTKLDISENKI 116
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 2e-11
Identities = 37/187 (19%), Positives = 65/187 (34%), Gaps = 15/187 (8%)
Query: 119 ILTKLSNLKVLSL-----VSLGLWGPLPSKINRFWSLEVLNISSNFIY--GEIPMEITSL 171
L +L+ L L V L SL+ L +S N + + + +L
Sbjct: 329 FSQHLKSLEFLDLSENLMVEEYLKNSACKGAWP--SLQTLVLSQNHLRSMQKTGEILLTL 386
Query: 172 KNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSE 231
KNL S+ ++ N + Q + LNL + + + + + NN+L S
Sbjct: 387 KNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDS- 445
Query: 232 IPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLN 291
L L++ IS N + P +L + ++ NQL L
Sbjct: 446 FSLFLPR---LQELYISRNKLKT-LPDASL-FPVLLVMKISRNQLKSVPDGIFDRLTSLQ 500
Query: 292 FVEISHN 298
+ + N
Sbjct: 501 KIWLHTN 507
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 4e-11
Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 18/207 (8%)
Query: 117 FTILTKLSNLKVLSLVSLGLWGPLPSKINRFW---SLEVLNISSNFIYGEIPMEITSLKN 173
+L+ L L L + +L L+IS N +P +
Sbjct: 354 SACKGAWPSLQTLVLSQNHLRS-MQKTGEILLTLKNLTSLDISRNTF-HPMPDSCQWPEK 411
Query: 174 LKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIP 233
++ + L+ + V LE L++ N+ F + + + N L++ +P
Sbjct: 412 MRFLNLSSTGIR-VVKTCI-PQTLEVLDVSNNNLD-SFSLFLPRLQELYISRNKLKT-LP 467
Query: 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFV 293
F L IS N L S+ + L N P + SC
Sbjct: 468 DAS-LFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTN------PWDCSCPRIDYLS 520
Query: 294 EI--SHNLLIGKLPSCIGSNSLNRTVV 318
++ C GS R+++
Sbjct: 521 RWLNKNSQKEQGSAKCSGSGKPVRSII 547
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 1e-09
Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 21/214 (9%)
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLE 198
+PS + +++ L++S N I ++ + NL+ ++L + +N D L LE
Sbjct: 20 IPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLE 77
Query: 199 ELNLGGNDFGPKFPSLS-------KNIVSVILRNNSLRS-EIPSGLKNFDQLKQFDISSN 250
L+L N SLS ++ + L N ++ + S N L+ I +
Sbjct: 78 HLDLSDN----HLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNV 133
Query: 251 NFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIG 309
I+ F+ L S+ L + L ++ ++ + + + + +
Sbjct: 134 ETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES-----AFLL 188
Query: 310 SNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEAL 343
+ + L N E
Sbjct: 189 EIFADILSSVRYLELRDTNLARFQFSPLPVDEVS 222
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 5e-09
Identities = 33/190 (17%), Positives = 60/190 (31%), Gaps = 36/190 (18%)
Query: 120 LTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLK 172
L +NL+VL L + + L S LE L++S N + L
Sbjct: 46 LRACANLQVLILKSSRINTIEGDAFYSLGS-------LEHLDLSDNHLSSLSSSWFGPLS 98
Query: 173 NLKSIVLADNLLN--GSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS 230
+LK + L N G L L+ L +G +
Sbjct: 99 SLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGN--------------------VETFSE 138
Query: 231 EIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKL 290
L + +I + + L S+ I +L L ++ + L + + +
Sbjct: 139 IRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSV 198
Query: 291 NFVEISHNLL 300
++E+ L
Sbjct: 199 RYLELRDTNL 208
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 1e-08
Identities = 31/199 (15%), Positives = 66/199 (33%), Gaps = 7/199 (3%)
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP 165
+L + + LS+++ L L L S + + +
Sbjct: 178 TLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTD 237
Query: 166 MEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI-LR 224
L L +L L D L L + N +D + + + + +
Sbjct: 238 ESFNELLKLLRYIL--ELSEVEFDDC-TLNGLGDFNPSESDVVSELGKVETVTIRRLHIP 294
Query: 225 NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284
L ++ + +++K+ + ++ SF L S+ +L+L+ N + E N
Sbjct: 295 QFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNS 354
Query: 285 SCSAKLNFVEI---SHNLL 300
+C ++ S N L
Sbjct: 355 ACKGAWPSLQTLVLSQNHL 373
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 2e-08
Identities = 26/223 (11%), Positives = 66/223 (29%), Gaps = 33/223 (14%)
Query: 106 SLSANFNIDRFF-TILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
+ L++L L + +L L + + L + + +
Sbjct: 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLL 188
Query: 165 PMEITSLKNLKSIVLADNLLN----GSVPDLQRLVLLEELNLGGNDFG-------PKFPS 213
+ L +++ + L D L +P + +++L G+ K
Sbjct: 189 EIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLR 248
Query: 214 LSKNIVSVILRNNSLRSEIPSGLKNFD-----------QLKQFDISSNNFVGPIQSFLFS 262
+ V + +L D +++ I + +
Sbjct: 249 YILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSL 308
Query: 263 LPSILYLNLAGNQLSEALPVNISCSA-----KLNFVEISHNLL 300
L + + + +++ + CS L F+++S NL+
Sbjct: 309 LEKVKRITVENSKVFL-----VPCSFSQHLKSLEFLDLSENLM 346
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 6e-06
Identities = 28/206 (13%), Positives = 68/206 (33%), Gaps = 23/206 (11%)
Query: 118 TILTKLSNLKVLSLVSLGLWGPLPSK-INRFWSLEVLNISSNFIYGEIPMEITSLKNLKS 176
++ L+NL+ L + ++ + + SL L I + + + S++++
Sbjct: 117 SLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHH 176
Query: 177 IVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPS------LSKNIVSVILRNNSLR 229
+ L + + L + L L + S +S + + R + L
Sbjct: 177 LTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLT 236
Query: 230 S----EIPSGLKNFDQLKQFDISSN--NFVGPIQSFLFS---------LPSILYLNLAGN 274
E+ L+ +L + + N +G +I L++
Sbjct: 237 DESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQF 296
Query: 275 QLSEALPVNISCSAKLNFVEISHNLL 300
L L S K+ + + ++ +
Sbjct: 297 YLFYDLSTVYSLLEKVKRITVENSKV 322
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 29/156 (18%)
Query: 459 IGEGSQGQLYKGFLTD-----GSRVSVKCLK-LKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG G++ G V+VK LK Q +++L L H H++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
G C +++ LV+E++ GSLRDYL + + Q + G+
Sbjct: 99 KGCCE------DAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMA 148
Query: 573 FLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
+LH + L N+LLD K+
Sbjct: 149 YLHA--------QHYIHRDLAARNVLLDNDRLVKIG 176
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 37/168 (22%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFLTDGSR-----VSVKCLKLK-QRHLPQSLMQHVELL 501
F T L +G G G ++KG V +K ++ K R Q++ H+ +
Sbjct: 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69
Query: 502 SKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
L H H+V +LG C GS++ LV +++ GSL D++ + + L +
Sbjct: 70 GSLDHAHIVRLLGLC---------PGSSLQLVTQYLPLGSLLDHVR--QHRGALGPQLLL 118
Query: 562 AIIIGATRGVQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ +G+ +L H NL N+LL +++
Sbjct: 119 NWGVQIAKGMYYLEEHGMVH---------RNLAARNVLLKSPSQVQVA 157
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 3e-11
Identities = 45/215 (20%), Positives = 91/215 (42%), Gaps = 34/215 (15%)
Query: 451 NNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRH 506
+F+ +G+G G +Y +++K L +L++ + L + VE+ S LRH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
+++ + G+ + D V+L+LE+ G++ L K + I
Sbjct: 69 PNILRLYGY----FHDATR----VYLILEYAPLGTVYRELQKLSK---FDEQRTATYITE 117
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKK-----GLESPL 619
+ + H + + ++K EN+LL A K++ G+++ PS + G +
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCG--TL- 171
Query: 620 RGQYVS----NQPGDGAKEDVYQLGVILLQVITGK 650
Y+ K D++ LGV+ + + GK
Sbjct: 172 --DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 3e-11
Identities = 36/158 (22%), Positives = 56/158 (35%), Gaps = 33/158 (20%)
Query: 459 IGEGSQGQLYKGFLTDGSR----VSVKCLK---LKQRHLPQSLMQHVELLSKLRHRHLVS 511
+G+GS G + +G S V+VKCLK L Q ++ V + L HR+L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
+ G + +V E GSL D L K + + G+
Sbjct: 86 LYGVV---------LTPPMKMVTELAPLGSLLDRLR--KHQGHFLLGTLSRYAVQVAEGM 134
Query: 572 QFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+L H +L N+LL K+
Sbjct: 135 GYLESKRFIH---------RDLAARNLLLATRDLVKIG 163
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 3e-11
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 459 IGEGSQGQLYKGFLTDGS----RVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG G + +G L +V+VK +KL + + + + H +++ +
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
LG CI + ++L + G L YL
Sbjct: 102 LGVCI---EMSSQGIPKPMVILPFMKYGDLHTYL 132
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 4e-11
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 42/213 (19%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVE----LLSKLRHRHLVSI 512
+G G+ G++ G G +V+VK L +Q+ ++ ++ L RH H++ +
Sbjct: 18 TLGVGTFGKVKIGEHQLTGHKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI---IIGATR 569
+ +++ T + F+V+E++S G L DY+ K ++ + + I+ A
Sbjct: 77 --YQVIS------TPTDFFMVMEYVSGGELFDYIC---KHGRVEEMEARRLFQQILSA-- 123
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY---NIPLPSKKGLE----SPLRGQ 622
V + H + +LK EN+LLD + AK++ + N+ + L SP
Sbjct: 124 -VDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF-LRTSCGSP---N 175
Query: 623 YV-----SNQPGDGAKEDVYQLGVILLQVITGK 650
Y S + G + D++ GVIL ++ G
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGT 208
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 4e-11
Identities = 30/155 (19%), Positives = 66/155 (42%), Gaps = 30/155 (19%)
Query: 459 IGEGSQGQLYKGFLTDGSR---VSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLVSILG 514
+G G+ G + +G + V++K LK ++ + +M+ +++ +L + ++V ++G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
C + LV+E G L +L K++ + ++ + G+++L
Sbjct: 78 VC---------QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYL 126
Query: 575 ------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
H +L N+LL AK+S
Sbjct: 127 EEKNFVH---------RDLAARNVLLVNRHYAKIS 152
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 4e-11
Identities = 28/155 (18%), Positives = 60/155 (38%), Gaps = 26/155 (16%)
Query: 459 IGEGSQGQLYKGFLT-----DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSIL 513
+G+G+ G + G+ V+VK L+ + + +++L L +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
G + LV+E++ +G LRD+L + + L + + +G+++
Sbjct: 91 GVSYGP-GRQS-----LRLVMEYLPSGCLRDFLQ--RHRARLDASRLLLYSSQICKGMEY 142
Query: 574 LHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
L + L NIL++ K++
Sbjct: 143 LGS--------RRCVHRDLAARNILVESEAHVKIA 169
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 5e-11
Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 442 SLEEIEEATNNFDPTNL------IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSL 494
L++++E + P + +GEGS G +YK G V++K + ++ Q +
Sbjct: 14 QLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEI 71
Query: 495 MQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ + ++ + H+V G +Y + +++V+E+ GS+ D + K
Sbjct: 72 IKEISIMQQCDSPHVVKYYG----SYF----KNTDLWIVMEYCGAGSVSDIIRLRNKT-- 121
Query: 555 LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
L + I+ +G+++LH ++K NILL+ AKL
Sbjct: 122 LTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKL 166
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 64.6 bits (157), Expect = 5e-11
Identities = 54/288 (18%), Positives = 101/288 (35%), Gaps = 37/288 (12%)
Query: 46 YPEVLQGWTDWTNFCYLPSSSSLKIV-----CTNSRVTELTVIGNK--SSPAHSPKPTFG 98
Y + W W LP + + V C ++ +EL + S P + P
Sbjct: 26 YADYFSAWDKWEKQ-ALPGENRNEAVSLLKECLINQFSELQLNRLNLSSLPDNLPP---- 80
Query: 99 KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSN 158
L N ++ ++L+ L L LP SL+ L++ +N
Sbjct: 81 ----QITVLEITQN--ALISLPELPASLEYLDACDNRL-STLPELP---ASLKHLDVDNN 130
Query: 159 FIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNI 218
+ +P L+ + +N L +P+L LE L++ N P L +++
Sbjct: 131 QL-TMLPELPALLEYIN---ADNNQLT-MLPEL--PTSLEVLSVRNNQLT-FLPELPESL 182
Query: 219 VSVILRNNSLRSEIPSGLKNFDQLKQFDIS---SNNFVGPIQSFLFSLPSILYLNLAGNQ 275
++ + N L +P+ ++ +I N + I + SL + L N
Sbjct: 183 EALDVSTNLL-ESLPAVPVRNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILEDNP 241
Query: 276 LSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC 323
LS + ++S + H I S N+L+R +
Sbjct: 242 LSSRIRESLS---QQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTA 286
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 6e-11
Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 26/151 (17%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG G G ++ G+ + +V++K ++ + ++ E++ KL H LV + G C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCL- 73
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL---- 574
+ P + LV E + +G L DYL ++ + + + + G+ +L
Sbjct: 74 --EQAP-----ICLVTEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 575 --HTGVAPGIFGNNLKTENILLDKALTAKLS 603
H +L N L+ + K+S
Sbjct: 125 VIH---------RDLAARNCLVGENQVIKVS 146
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 6e-11
Identities = 33/167 (19%), Positives = 69/167 (41%), Gaps = 20/167 (11%)
Query: 443 LEEIEEATNNFDPTNL------IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLM 495
E E + DP + +G+G+ G++YK G+ + K ++ K + +
Sbjct: 5 SREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI 64
Query: 496 QHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDML 555
+E+L+ H ++V +LG Y +++++E G++ + + + L
Sbjct: 65 VEIEILATCDHPYIVKLLG----AYY----HDGKLWIMIEFCPGGAVDAIMLELDRG--L 114
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
PQ + + FLH+ I +LK N+L+ +L
Sbjct: 115 TEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRL 158
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 64.6 bits (157), Expect = 6e-11
Identities = 40/219 (18%), Positives = 84/219 (38%), Gaps = 36/219 (16%)
Query: 401 YERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNL-- 458
+R + S +P+PA + + EE+++ NL
Sbjct: 280 PQRRIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLI 339
Query: 459 ----IGEGSQGQLYKGFLTDGSR---VSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLV 510
+G G+ G + +G + V++K LK ++ + +M+ +++ +L + ++V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
++G C + LV+E G L +L K++ + ++ + G
Sbjct: 400 RLIGVC---------QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMG 448
Query: 571 VQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+++L H NL N+LL AK+S
Sbjct: 449 MKYLEEKNFVH---------RNLAARNVLLVNRHYAKIS 478
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 7e-11
Identities = 33/205 (16%), Positives = 73/205 (35%), Gaps = 34/205 (16%)
Query: 403 RSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEG 462
++ ++ G+P A ++ +P+ + + +G+G
Sbjct: 9 KAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSR----------------RRYVRGRFLGKG 52
Query: 463 SQGQLYKGFLTD-GSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+ ++ D + K + L + H + + + + L H+H ++
Sbjct: 53 GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH--------VV 104
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ VF+VLE SL + K++ L P+ + G Q+LH
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQYLH--- 158
Query: 579 APGIFGNNLKTENILLDKALTAKLS 603
+ +LK N+ L++ L K+
Sbjct: 159 RNRVIHRDLKLGNLFLNEDLEVKIG 183
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 8e-11
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 24/150 (16%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G + G V+VK +K Q + + KL H LV G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCS- 73
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+++P +++V E+ISNG L +YL L+ Q + + G+ FL +
Sbjct: 74 --KEYP-----IYIVTEYISNGCLLNYLR--SHGKGLEPSQLLEMCYDVCEGMAFLES-- 122
Query: 579 APGIFGNN-----LKTENILLDKALTAKLS 603
+ L N L+D+ L K+S
Sbjct: 123 ------HQFIHRDLAARNCLVDRDLCVKVS 146
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 8e-11
Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 32/157 (20%)
Query: 459 IGEGSQGQLYKGFLTDGSR-----VSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSI 512
+G G+ G +YKG V++K L+ + ++ +++ + + H+ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
LG C STV L+ + + G L DY+ + KD + + + +G+
Sbjct: 83 LGIC---------LTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMN 131
Query: 573 FL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+L H +L N+L+ K++
Sbjct: 132 YLEDRRLVH---------RDLAARNVLVKTPQHVKIT 159
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 1e-10
Identities = 30/150 (20%), Positives = 57/150 (38%), Gaps = 18/150 (12%)
Query: 458 LIGEGSQGQLYKGFLTD-GSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSIL 513
+G+G + ++ D + K + L + H + + + + L H+H+V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG-F 80
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
VF+VLE SL + K++ L P+ + G Q+
Sbjct: 81 HGFF-------EDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQY 130
Query: 574 LHTGVAPGIFGNNLKTENILLDKALTAKLS 603
LH + +LK N+ L++ L K+
Sbjct: 131 LH---RNRVIHRDLKLGNLFLNEDLEVKIG 157
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 1e-10
Identities = 32/174 (18%), Positives = 65/174 (37%), Gaps = 26/174 (14%)
Query: 436 PPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM 495
P G E + +G G G + G V++K +K + +
Sbjct: 9 PSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFI 67
Query: 496 QHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDML 555
+ +++ L H LV + G C + P +F++ E+++NG L +YL + +
Sbjct: 68 EEAKVMMNLSHEKLVQLYGVCT---KQRP-----IFIITEYMANGCLLNYLR--EMRHRF 117
Query: 556 KWPQRMAIIIGATRGVQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ Q + + +++L H +L N L++ K+S
Sbjct: 118 QTQQLLEMCKDVCEAMEYLESKQFLH---------RDLAARNCLVNDQGVVKVS 162
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 18/124 (14%)
Query: 459 IGEGSQGQLYKGFLTDGS--------RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
+G+G+ +++KG + V +K L R+ +S + ++SKL H+HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
G C+ LV E + GSL YL K K+ + ++ +
Sbjct: 76 LNYGVCV---CGDE-----NILVQEFVKFGSLDTYLK--KNKNCINILWKLEVAKQLAAA 125
Query: 571 VQFL 574
+ FL
Sbjct: 126 MHFL 129
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 1e-10
Identities = 35/186 (18%), Positives = 70/186 (37%), Gaps = 24/186 (12%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFW---SLEVLNISSNFIYGEIPMEITSLKNLKS 176
L + LS G+ + I +L L + N I ++ + +L +
Sbjct: 37 QADLDGITTLSAFGTGV-----TTIEGVQYLNNLIGLELKDNQI-TDLA-PLKNLTKITE 89
Query: 177 IVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPS 234
+ L+ N L +V + L ++ L+L L+ N+ + L N + + I S
Sbjct: 90 LELSGNPLK-NVSAIAGLQSIKTLDLTSTQIT-DVTPLAGLSNLQVLYLDLNQI-TNI-S 145
Query: 235 GLKNFDQLKQFDISSNNFVGPIQ--SFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNF 292
L L+ I + + + L +L + L N++S+ P ++ L
Sbjct: 146 PLAGLTNLQYLSIGNAQ----VSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIE 199
Query: 293 VEISHN 298
V + +N
Sbjct: 200 VHLKNN 205
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 41/201 (20%), Positives = 75/201 (37%), Gaps = 18/201 (8%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVS--LGLWGPLPSKINRFWSLEVLNISSNFIYG 162
L + N + + + L ++K L L S + PL N L+VL + N I
Sbjct: 88 TELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSN----LQVLYLDLNQI-T 142
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVS 220
I + L NL+ + + + ++ + L L L L N L+ N++
Sbjct: 143 NIS-PLAGLTNLQYLSIGNAQVS-DLTPLANLSKLTTLKADDNKI-SDISPLASLPNLIE 199
Query: 221 VILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYL-NLAGNQLSEA 279
V L+NN + S L N L +++ + +L + +G ++
Sbjct: 200 VHLKNNQISDV--SPLANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAPIA-- 255
Query: 280 LPVNISCSAKLNFVEISHNLL 300
P IS + ++ NL
Sbjct: 256 -PATISDNGTYASPNLTWNLT 275
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 3e-09
Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 18/198 (9%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
+LSA + L+NL L L + P + + L +S N + +
Sbjct: 44 TTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPL-KNV 100
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVI 222
I L+++K++ L + V L L L+ L L N L+ N+ +
Sbjct: 101 S-AIAGLQSIKTLDLTSTQIT-DVTPLAGLSNLQVLYLDLNQIT-NISPLAGLTNLQYLS 157
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ--SFLFSLPSILYLNLAGNQLSEAL 280
+ N + + L N +L N I S L SLP+++ ++L NQ+S+
Sbjct: 158 IGNAQVSDL--TPLANLSKLTTLKADDNK----ISDISPLASLPNLIEVHLKNNQISDVS 211
Query: 281 PVNISCSAKLNFVEISHN 298
P ++ ++ L V +++
Sbjct: 212 P--LANTSNLFIVTLTNQ 227
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 36/168 (21%), Positives = 84/168 (50%), Gaps = 22/168 (13%)
Query: 443 LEEIEEATNNFDPTNL------IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLM 495
LE++ + DP IG+G+ G +Y + G V+++ + L+Q+ + ++
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII 65
Query: 496 QHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDML 555
+ ++ + ++ ++V+ L +Y G +++V+E+++ GSL D +T + +
Sbjct: 66 NEILVMRENKNPNIVNYLD----SYL----VGDELWVVMEYLAGGSLTDVVT----ETCM 113
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
Q A+ + ++FLH+ + ++K++NILL + KL+
Sbjct: 114 DEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLT 158
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 27/156 (17%)
Query: 459 IGEGSQGQLYKGFLT-----DGSRVSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG G++ G +V+VK LK + L + +E+L L H ++V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
G C + G+ + L++E + +GSL++YL K K+ + Q++ + +G+
Sbjct: 89 KGICT------EDGGNGIKLIMEFLPSGSLKEYLP--KNKNKINLKQQLKYAVQICKGMD 140
Query: 573 FLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
+L + L N+L++ K+
Sbjct: 141 YLGS--------RQYVHRDLAARNVLVESEHQVKIG 168
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 2e-10
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRH 506
+F NL+G+GS +Y+ + G V++K + + + + Q + V++ +L+H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR--MAII 564
++ + + ++D V+LVLE NG + YL + + K + R M I
Sbjct: 71 PSILELYNY----FEDSNY----VYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQI 121
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLE-----S 617
I + +LH + GI +L N+LL + + K++ G L +
Sbjct: 122 ITG---MLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGT 175
Query: 618 PLRGQYVS----NQPGDGAKEDVYQLGVILLQVITGK 650
P Y+S + G + DV+ LG + ++ G+
Sbjct: 176 P---NYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 41/298 (13%), Positives = 95/298 (31%), Gaps = 58/298 (19%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKL-R 505
T F IG G G ++K DG ++K K Q+ ++ V + L +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAII 564
H H+V Y + + E+ + GSL D +++ + K + ++
Sbjct: 70 HSHVVR--------YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL 121
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK----------- 613
+ RG++++H + + ++K NI + + +
Sbjct: 122 LQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 178
Query: 614 GLESPLRGQYV-------------SNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDG 660
G + + V K D++ L + ++ + +
Sbjct: 179 GHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR------ 232
Query: 661 LKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ ++R P + + + ++ + D +RPS ++
Sbjct: 233 --------NGDQWHEIRQGRLPRIPQVLSQE-FTELLK---VMIHPDPERRPSAMALV 278
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 31/198 (15%)
Query: 413 GSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNL------IGEGSQGQ 466
G + + + + DP L IGEGS G
Sbjct: 10 GVDLGTENLYFQSGVVTHEQF---------KAALRMVVDQGDPRLLLDSYVKIGEGSTGI 60
Query: 467 LYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525
+ G +V+VK + L+++ + L V ++ +H ++V + +Y
Sbjct: 61 VCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK----SYL---- 112
Query: 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGN 585
G +++++E + G+L D ++ + L Q + + + +LH A G+
Sbjct: 113 VGEELWVLMEFLQGGALTDIVS----QVRLNEEQIATVCEAVLQALAYLH---AQGVIHR 165
Query: 586 NLKTENILLDKALTAKLS 603
++K+++ILL KLS
Sbjct: 166 DIKSDSILLTLDGRVKLS 183
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 3e-10
Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 37/159 (23%)
Query: 459 IGEGSQGQLYKGFLTDGSR----VSVKCLK----LKQRHLPQSLMQHVELLSKLRHRHLV 510
IGEG G +++G V++K K R + +Q + + H H+V
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR---EKFLQEALTMRQFDHPHIV 79
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
++G T + V++++E + G LR +L +K L + +
Sbjct: 80 KLIGVI---------TENPVWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTA 128
Query: 571 VQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ +L H +A N+L+ KL
Sbjct: 129 LAYLESKRFVHRDIA---------ARNVLVSSNDCVKLG 158
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 3e-10
Identities = 42/185 (22%), Positives = 77/185 (41%), Gaps = 18/185 (9%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
+ +L + + N S++ + +++ I + I L N+ + L
Sbjct: 20 DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDI-KSVQ-GIQYLPNVTKLFL 75
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSGLK 237
N L + L L L L L N SL K + S+ L +N + S+I +GL
Sbjct: 76 NGNKLT-DIKPLANLKNLGWLFLDENKV-KDLSSLKDLKKLKSLSLEHNGI-SDI-NGLV 131
Query: 238 NFDQLKQFDISSNNFVGPIQ--SFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295
+ QL+ + +N I + L L + L+L NQ+S+ +P ++ KL + +
Sbjct: 132 HLPQLESLYLGNNK----ITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 185
Query: 296 SHNLL 300
S N +
Sbjct: 186 SKNHI 190
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 6e-10
Identities = 47/217 (21%), Positives = 77/217 (35%), Gaps = 22/217 (10%)
Query: 120 LTKLSNLKVLSLVS--LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
+ L N+ L L L PL + N L L + N + ++ + LK LKS+
Sbjct: 64 IQYLPNVTKLFLNGNKLTDIKPLANLKN----LGWLFLDENKV-KDLSS-LKDLKKLKSL 117
Query: 178 VLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSG 235
L N ++ + L L LE L LG N LS + ++ L +N +
Sbjct: 118 SLEHNGIS-DINGLVHLPQLESLYLGNNKI-TDITVLSRLTKLDTLSLEDNQISDI--VP 173
Query: 236 LKNFDQLKQFDISSNNFVGPIQSF--LFSLPSILYLNLAGNQLSEALPVNISCSAKLNFV 293
L +L+ +S N+ I L L ++ L L + + S N V
Sbjct: 174 LAGLTKLQNLYLSKNH----ISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTV 229
Query: 294 EISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTK 330
+ + L+ P I + W+ N
Sbjct: 230 KNTDGSLVT--PEIISDDGDYEKPNVKWHLPEFTNEV 264
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 3e-08
Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 18/201 (8%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRF---WSLEVLNISSNFIY 161
L N N L L NL L L + ++ L+ L++ N I
Sbjct: 71 TKLFLNGNKLTDIKPLANLKNLGWLFLDENKV-----KDLSSLKDLKKLKSLSLEHNGI- 124
Query: 162 GEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSK--NIV 219
+I + L L+S+ L +N + + L RL L+ L+L N L+ +
Sbjct: 125 SDIN-GLVHLPQLESLYLGNNKIT-DITVLSRLTKLDTLSLEDNQI-SDIVPLAGLTKLQ 181
Query: 220 SVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279
++ L N + S++ L L ++ S + + +L + L
Sbjct: 182 NLYLSKNHI-SDL-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVT- 238
Query: 280 LPVNISCSAKLNFVEISHNLL 300
P IS + +L
Sbjct: 239 -PEIISDDGDYEKPNVKWHLP 258
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 61.5 bits (149), Expect = 3e-10
Identities = 32/236 (13%), Positives = 72/236 (30%), Gaps = 40/236 (16%)
Query: 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTD------GSRVSVKCLKLKQRHLPQSLMQH 497
E + + +L+GEG+ Q+Y+ D + +K K Q
Sbjct: 58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQL 117
Query: 498 VELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKW 557
+E L + + +Q+ LV E S G+L + + +K
Sbjct: 118 MERLKPSMQHMFMKFYSAHL--FQNG------SVLVGELYSYGTLLNAINLYKNTPEKVM 169
Query: 558 PQRMAIIIGA--TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK--- 612
PQ + I ++ +H I ++K +N +L + ++
Sbjct: 170 PQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALID 226
Query: 613 ----KGLESPLRGQYVSNQPGD--------------GAKEDVYQLGVILLQVITGK 650
++ +G + + + D + + + ++ G
Sbjct: 227 LGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGT 282
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 3e-10
Identities = 44/190 (23%), Positives = 70/190 (36%), Gaps = 43/190 (22%)
Query: 120 LTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSL 171
LS LK L L + + +PS L L++ I L
Sbjct: 132 FVYLSKLKELWLRNNPIESIPSYAFNRIPS-------LRRLDLGELKRLSYISEGAFEGL 184
Query: 172 KNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSE 231
NL+ + LA L +P+L L+ L+EL+L GN S
Sbjct: 185 SNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHL----------------------SA 221
Query: 232 IPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNISCS-A 288
I G + L++ + + I+ F L S++ +NLA N L+ LP ++
Sbjct: 222 IRPGSFQGLMHLQKLWMIQSQIQV-IERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLH 279
Query: 289 KLNFVEISHN 298
L + + HN
Sbjct: 280 HLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 17/148 (11%)
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGN---DFGPK-FPSLSK 216
E+P I++ N + + L +N + + + L LE L L N F L+
Sbjct: 57 EVPDGIST--NTRLLNLHENQIQ-IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLA- 112
Query: 217 NIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAG- 273
N+ ++ L +N L + IP+G +LK+ + +N I S+ F+ +PS+ L+L
Sbjct: 113 NLNTLELFDNRLTT-IPNGAFVYLSKLKELWLRNNPIES-IPSYAFNRIPSLRRLDLGEL 170
Query: 274 NQLSEALPVNI-SCSAKLNFVEISHNLL 300
+LS + + L ++ ++ L
Sbjct: 171 KRLSY-ISEGAFEGLSNLRYLNLAMCNL 197
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 4e-10
Identities = 24/161 (14%), Positives = 59/161 (36%), Gaps = 28/161 (17%)
Query: 459 IGEGSQGQLYKGFLTDGS----RVSVKCLK--LKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+G+G G + + L +V+VK LK + + ++ + + H H+ +
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 513 LGHCILTYQDHPNT-GSTVFLVLEHISNGSLRDYL---TDWKKKDMLKWPQRMAIIIGAT 568
+G + + ++L + +G L +L + L + ++
Sbjct: 91 VGVSL---RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIA 147
Query: 569 RGVQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
G+++L H +L N +L + +T ++
Sbjct: 148 CGMEYLSSRNFIH---------RDLAARNCMLAEDMTVCVA 179
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 4e-10
Identities = 30/151 (19%), Positives = 66/151 (43%), Gaps = 24/151 (15%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + ++ ++ +++H +LV +LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
++ P +++ E ++ G+L DYL + + + + + + +++L
Sbjct: 80 ---REPP-----FYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEK- 129
Query: 578 VAPGIFGNN-----LKTENILLDKALTAKLS 603
N L N L+ + K++
Sbjct: 130 -------KNFIHRDLAARNCLVGENHLVKVA 153
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 4e-10
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 48/220 (21%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQ---HVELLSKLRHRHLVSI 512
L+GEGS G++ + R +VK L K K R +P ++LL +LRH++++ +
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGS--LRDYLTDWKKKDMLKWPQRMAI-----II 565
+L + +++V+E+ G + D + +K ++P A +I
Sbjct: 72 --VDVLYNE----EKQKMYMVMEYCVCGMQEMLDSVP---EK---RFPVCQAHGYFCQLI 119
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY---NIPLPSKKG--LE---- 616
G+++LH + GI ++K N+LL T K+S P
Sbjct: 120 D---GLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQG 173
Query: 617 SPLRGQYVS------NQPGDGAKEDVYQLGVILLQVITGK 650
SP + G K D++ GV L + TG
Sbjct: 174 SP---AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 4e-10
Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFLT-----DGSRVSVKCLKLKQRHLPQSLMQHVELLS 502
F+ +L +G+G+ G + G V+VK L+ + + +E+L
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
L+H ++V G + + L++E++ GSLRDYL K K+ + + +
Sbjct: 67 SLQHDNIVKYKG-VCYSAGRRN-----LKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQ 118
Query: 563 IIIGATRGVQFLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
+G+++L T L T NIL++ K+
Sbjct: 119 YTSQICKGMEYLGT--------KRYIHRDLATRNILVENENRVKIG 156
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 5e-10
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 42/213 (19%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVE----LLSKLRHRHLVSI 512
+G G+ G++ G G +V+VK L +Q+ ++ + L RH H++ +
Sbjct: 23 TLGVGTFGKVKVGKHELTGHKVAVKILN-RQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI---IIGATR 569
YQ +T S +F+V+E++S G L DY+ K L + + I+
Sbjct: 82 -------YQVI-STPSDIFMVMEYVSGGELFDYIC---KNGRLDEKESRRLFQQILSG-- 128
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY---NIPLPSKKGLE----SPLRGQ 622
V + H + +LK EN+LLD + AK++ + N+ + L SP
Sbjct: 129 -VDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF-LRTSCGSPN--- 180
Query: 623 YV-----SNQPGDGAKEDVYQLGVILLQVITGK 650
Y S + G + D++ GVIL ++ G
Sbjct: 181 YAAPEVISGRLYAGPEVDIWSSGVILYALLCGT 213
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 6e-10
Identities = 35/185 (18%), Positives = 75/185 (40%), Gaps = 17/185 (9%)
Query: 120 LTKLSNLKVLS-LVSLGLWGPLPSKI---NRFWSLEVLNISSNFIYGEIPMEITSLKNLK 175
+ ++ L+ V L + + ++ N ++ I + + NLK
Sbjct: 9 INQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNI-QSLA-GMQFFTNLK 66
Query: 176 SIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSG 235
+ L+ N ++ + L+ L LEEL++ N S + + L NN LR
Sbjct: 67 ELHLSHNQIS-DLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNELRD--TDS 123
Query: 236 LKNFDQLKQFDISSNNFVGPIQ--SFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFV 293
L + L+ I +N ++ L L + L+L GN+++ ++ K+N++
Sbjct: 124 LIHLKNLEILSIRNNK----LKSIVMLGFLSKLEVLDLHGNEITNTGG--LTRLKKVNWI 177
Query: 294 EISHN 298
+++
Sbjct: 178 DLTGQ 182
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 7e-09
Identities = 42/225 (18%), Positives = 78/225 (34%), Gaps = 28/225 (12%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKI---NRFWSLEVLNISSNFIYGEIPMEITSLKNLKS 176
+LS ++ + + + + F +L+ L++S N I ++ + L L+
Sbjct: 37 QKELSGVQNFNGDNSNI-----QSLAGMQFFTNLKELHLSHNQI-SDLSP-LKDLTKLEE 89
Query: 177 IVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPS 234
+ + N L ++ + L L L N+ SL KN+ + +RNN L+S
Sbjct: 90 LSVNRNRLK-NLNGIPSACL-SRLFLDNNEL-RDTDSLIHLKNLEILSIRNNKLKS--IV 144
Query: 235 GLKNFDQLKQFDISSNNFVGPIQ--SFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNF 292
L +L+ D+ N I L L + +++L G + N
Sbjct: 145 MLGFLSKLEVLDLHGNE----ITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNT 200
Query: 293 VEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQHPYSF 337
V+ I P I + W + Y F
Sbjct: 201 VKDPDGRWIS--PYYISNGGSYVDGCVLWELPVYTDEVS---YKF 240
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 6e-10
Identities = 51/302 (16%), Positives = 102/302 (33%), Gaps = 56/302 (18%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHL 509
N ++G GS G + G V+VK + L + ++LL++ H ++
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-LIDFC--DIALMEIKLLTESDDHPNV 71
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD----WKKKDMLKWPQRMAIII 565
+ + +++ LE N +L+D + + + K ++++
Sbjct: 72 IRYYC----SETTDRF----LYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK-K----GLESPLR 620
GV LH + I +LK +NIL+ + + GL L
Sbjct: 123 QIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 621 GQYVSNQ---------PGDGAKEDVYQLGVILLQVITGKQVKSTSEVD----GLKLQLET 667
S + G A E ++ + + T +D G
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPE------LLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 668 CLAEAP--SKLRAEADPSVRGTYAYDSLRTTVEITI---------NCLSKDAAKRPSIED 716
+ P K E++ +RG ++ D ++ + ++ + D KRP+
Sbjct: 234 SKGKHPFGDKYSRESN-IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 292
Query: 717 VL 718
VL
Sbjct: 293 VL 294
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 6e-10
Identities = 44/207 (21%), Positives = 80/207 (38%), Gaps = 43/207 (20%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
+GEG+ G++ V+VK + + P+++ + + + L H ++V
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY-- 71
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI-----IIGATRG 570
H G+ +L LE+ S G L D + M P+ A ++
Sbjct: 72 ------GHRREGNIQYLFLEYCSGGELFDRIE--PDIGM---PEPDAQRFFHQLMAG--- 117
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GY-NIPLPSKKG--LE----SPLRG 621
V +LH GI ++K EN+LLD+ K+S G + + + L +
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL--- 171
Query: 622 QYV-----SNQPGDGAKEDVYQLGVIL 643
YV + DV+ G++L
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVL 198
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 7e-10
Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFLT-----DGSRVSVKCLKLKQRHLPQSLMQHVELLS 502
F+ +L +G+G+ G + G V+VK L+ + + +E+L
Sbjct: 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 97
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
L+H ++V G + + L++E++ GSLRDYL K K+ + + +
Sbjct: 98 SLQHDNIVKYKG-VCYSAGRRN-----LKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQ 149
Query: 563 IIIGATRGVQFLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
+G+++L T L T NIL++ K+
Sbjct: 150 YTSQICKGMEYLGT--------KRYIHRDLATRNILVENENRVKIG 187
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 8e-10
Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 76/279 (27%)
Query: 458 LIGEGSQGQLYKGF--LTDGSRVSVKCLKLKQRHLPQSLMQH-VELLSKLRHRHLVSILG 514
I G G +Y +G V +K L Q++ + L+++ H +V I
Sbjct: 87 CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIF- 145
Query: 515 HCILTYQDHPNTG--STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
+ +H + ++V+E++ SL+ L + +A ++ +
Sbjct: 146 ----NFVEHTDRHGDPVGYIVMEYVGGQSLKRSK-----GQKLPVAEAIAYLLEILPALS 196
Query: 573 FLHTGVAPGIFGNNLKTENILLD------------KALTAKLSGYNIPLPSKKGLESPLR 620
+LH + G+ N+LK ENI+L + + L
Sbjct: 197 YLH---SIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINS---------------FGYLY 238
Query: 621 G--QYVS-----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673
G + + P D+Y +G L + ++ VDGL
Sbjct: 239 GTPGFQAPEIVRTGPTVAT--DIYTVGRTLAALTLDLPTRNGRYVDGL------------ 284
Query: 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP 712
E DP ++ YDS + + D +R
Sbjct: 285 ----PEDDPVLK---TYDSYGRLLRR---AIDPDPRQRF 313
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 8e-10
Identities = 41/215 (19%), Positives = 89/215 (41%), Gaps = 34/215 (15%)
Query: 451 NNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRH 506
++FD +G+G G +Y + +++K L +L++ + L + +E+ S LRH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
+++ + + + D ++L+LE G L L + D + M +
Sbjct: 74 PNILRMYNY----FHDR----KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 125
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKK-----GLESPL 619
A + + H + ++K EN+L+ K++ G+++ PS + G +
Sbjct: 126 A---LHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCG--TL- 176
Query: 620 RGQYVS----NQPGDGAKEDVYQLGVILLQVITGK 650
Y+ K D++ GV+ + + G
Sbjct: 177 --DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 8e-10
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 36/159 (22%)
Query: 459 IGEGSQGQLYKGFLTDGSR----VSVKCLK----LKQRHLPQSLMQHVELLSKLRHRHLV 510
+G G G++ G L S+ V++K LK KQR + + ++ + H +++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNII 109
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ G V +V E++ NGSL +L K Q + ++ G G
Sbjct: 110 RLEGVVTK--------SKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASG 159
Query: 571 VQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+++L H +A NIL++ L K+S
Sbjct: 160 MKYLSDMGYVHRDLA---------ARNILINSNLVCKVS 189
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 9e-10
Identities = 34/159 (21%), Positives = 63/159 (39%), Gaps = 36/159 (22%)
Query: 459 IGEGSQGQLYKGFLTDGSR----VSVKCLK----LKQRHLPQSLMQHVELLSKLRHRHLV 510
IG G G++ G L + V++K LK +QR + + ++ + H +++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR---RDFLSEASIMGQFDHPNII 113
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ G G +V E++ NGSL +L Q + ++ G G
Sbjct: 114 RLEGVVT--------RGRLAMIVTEYMENGSLDTFLR--THDGQFTIMQLVGMLRGVGAG 163
Query: 571 VQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+++L H +A N+L+D L K+S
Sbjct: 164 MRYLSDLGYVHRDLA---------ARNVLVDSNLVCKVS 193
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 31/173 (17%), Positives = 65/173 (37%), Gaps = 35/173 (20%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGS----RVSVKCLK----LKQRHLPQSLMQ 496
I ++ +IG G G +Y G L D +VK L + + +
Sbjct: 19 VIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLT 75
Query: 497 HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLK 556
++ H +++S+LG C + +VL ++ +G LR+++ +
Sbjct: 76 EGIIMKDFSHPNVLSLLGIC--LRSEGS-----PLVVLPYMKHGDLRNFIR--NETHNPT 126
Query: 557 WPQRMAIIIGATRGVQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ + +G+++L H +L N +LD+ T K++
Sbjct: 127 VKDLIGFGLQVAKGMKYLASKKFVH---------RDLAARNCMLDEKFTVKVA 170
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 1e-09
Identities = 39/192 (20%), Positives = 67/192 (34%), Gaps = 15/192 (7%)
Query: 120 LTKLSNLKVLSLVS--LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
KL+ L LSL S L G SL+ L++S N + + L+ L+ +
Sbjct: 48 FDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGV-ITMSSNFLGLEQLEHL 106
Query: 178 VLADNLLNGSVPD---LQRLVLLEELNLGGNDFG--PK--FPSLSKNIVSVILRNNSLRS 230
+ L + + L L L++ F LS ++ + + NS +
Sbjct: 107 DFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS-SLEVLKMAGNSFQE 164
Query: 231 EIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI-SCSA 288
L D+S + SL S+ LN++ N +L C
Sbjct: 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF-SLDTFPYKCLN 223
Query: 289 KLNFVEISHNLL 300
L ++ S N +
Sbjct: 224 SLQVLDYSLNHI 235
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 27/220 (12%)
Query: 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQ-SLSAN--FNIDRFFTILTKLSNL----- 126
+++T+L++ N S + ++ + LS N + F L +L +L
Sbjct: 52 TQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHS 111
Query: 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLN 185
+ + ++ L + L L+IS I L +L+ + +A N
Sbjct: 112 NLKQMSEFSVFLSLRN-------LIYLDISHTHT-RVAFNGIFNGLSSLEVLKMAGNSFQ 163
Query: 186 GSVPD--LQRLVLLEELNLGGNDFG--PK--FPSLSKNIVSVILRNNSLRSEIPSG-LKN 238
+ L L L+L F SLS ++ + + +N+ S + + K
Sbjct: 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS-SLQVLNMSHNNFFS-LDTFPYKC 221
Query: 239 FDQLKQFDISSNNFVGPIQSFLFSLPSIL-YLNLAGNQLS 277
+ L+ D S N+ + + L PS L +LNL N +
Sbjct: 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 27/154 (17%), Positives = 56/154 (36%), Gaps = 16/154 (10%)
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDF------GPKFPSL 214
+P I + + L N L S+P +L L +L+L N
Sbjct: 21 SVPTGI--PSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGT 77
Query: 215 SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAG 273
+ ++ + L N + + + S +QL+ D +N S SL +++YL+++
Sbjct: 78 T-SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 135
Query: 274 NQLSEALPVNI-SCSAKLNFVEISHNLLIGKLPS 306
I + + L ++++ N
Sbjct: 136 THTRV-AFNGIFNGLSSLEVLKMAGNSFQENFLP 168
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 44/207 (21%), Positives = 80/207 (38%), Gaps = 43/207 (20%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
+GEG+ G++ V+VK + + P+++ + + + L H ++V
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY-- 71
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI-----IIGATRG 570
H G+ +L LE+ S G L D + M P+ A ++
Sbjct: 72 ------GHRREGNIQYLFLEYCSGGELFDRIE--PDIGM---PEPDAQRFFHQLMAG--- 117
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GY-NIPLPSKKG--LE----SPLRG 621
V +LH GI ++K EN+LLD+ K+S G + + + L +
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL--- 171
Query: 622 QYV-----SNQPGDGAKEDVYQLGVIL 643
YV + DV+ G++L
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVL 198
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 1e-09
Identities = 32/155 (20%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 459 IGEGSQGQLYKGFLTDGS----RVSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLVSIL 513
+GEG G++Y+G T+ V+VK K + M ++ L H H+V ++
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
G ++++E G L YL + K+ LK + + + + +
Sbjct: 80 GII---------EEEPTWIIMELYPYGELGHYLE--RNKNSLKVLTLVLYSLQICKAMAY 128
Query: 574 LHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
L + N + NIL+ KL
Sbjct: 129 LES--------INCVHRDIAVRNILVASPECVKLG 155
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 60.3 bits (146), Expect = 2e-09
Identities = 39/245 (15%), Positives = 78/245 (31%), Gaps = 43/245 (17%)
Query: 378 VVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPP 437
++ G LV + ER++ + + K + S V + +
Sbjct: 313 LIDGYCRLVNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIID 372
Query: 438 FRGFSLEEIEEATNNFDPTNL-----IGEGSQGQLYKGFLTDGSR----VSVKCLK---- 484
+ + IGEG G +++G V++K K
Sbjct: 373 EED-TYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS 431
Query: 485 LKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRD 544
R + +Q + + H H+V ++G T + V++++E + G LR
Sbjct: 432 DSVR---EKFLQEALTMRQFDHPHIVKLIGVI---------TENPVWIIMELCTLGELRS 479
Query: 545 YLTDWKKKDMLKWPQRMAIIIGATRGVQFL------HTGVAPGIFGNNLKTENILLDKAL 598
+L +K L + + + +L H +A N+L+
Sbjct: 480 FLQ--VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA---------ARNVLVSSND 528
Query: 599 TAKLS 603
KL
Sbjct: 529 CVKLG 533
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 2e-09
Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 21/197 (10%)
Query: 386 VVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEE 445
+++ R G E GS + +A+ +
Sbjct: 25 ILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGAN-TVHIDLSALNPELVQAVQHVV 83
Query: 446 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGS----RVSVKCLK----LKQRHLPQSLMQH 497
I ++ +IG G G +Y G L D +VK L + + +
Sbjct: 84 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTE 140
Query: 498 VELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKW 557
++ H +++S+LG C + +VL ++ +G LR+++ +
Sbjct: 141 GIIMKDFSHPNVLSLLGIC--LRSEGS-----PLVVLPYMKHGDLRNFIR--NETHNPTV 191
Query: 558 PQRMAIIIGATRGVQFL 574
+ + +G++FL
Sbjct: 192 KDLIGFGLQVAKGMKFL 208
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 2e-09
Identities = 47/190 (24%), Positives = 70/190 (36%), Gaps = 43/190 (22%)
Query: 120 LTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSL 171
LS L+ L L + + +PS L L++ I L
Sbjct: 143 FEYLSKLRELWLRNNPIESIPSYAFNRVPS-------LMRLDLGELKKLEYISEGAFEGL 195
Query: 172 KNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSE 231
NLK + L + +P+L LV LEEL + GN F E
Sbjct: 196 FNLKYLNLGMCNIK-DMPNLTPLVGLEELEMSGNHF----------------------PE 232
Query: 232 IPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNISCS-A 288
I G LK+ + ++ I+ F L S++ LNLA N LS +LP ++
Sbjct: 233 IRPGSFHGLSSLKKLWVMNSQVSL-IERNAFDGLASLVELNLAHNNLS-SLPHDLFTPLR 290
Query: 289 KLNFVEISHN 298
L + + HN
Sbjct: 291 YLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 6e-04
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 17/148 (11%)
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGNDFG---PK-FPSLSK 216
E+P I N + + L +N + + + L LE L LG N F L+
Sbjct: 68 EVPQGI--PSNTRYLNLMENNIQ-MIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLA- 123
Query: 217 NIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAG- 273
++ ++ L +N L IPSG + +L++ + +N I S+ F+ +PS++ L+L
Sbjct: 124 SLNTLELFDNWLTV-IPSGAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLMRLDLGEL 181
Query: 274 NQLSEALPVNI-SCSAKLNFVEISHNLL 300
+L + L ++ + +
Sbjct: 182 KKLEY-ISEGAFEGLFNLKYLNLGMCNI 208
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 2e-09
Identities = 32/162 (19%), Positives = 69/162 (42%), Gaps = 14/162 (8%)
Query: 149 SLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN 205
+L+ L ++SN I I + +SL +L+ + L+ N L ++ + L L LNL GN
Sbjct: 77 NLQALVLTSNGI-NTIEEDSFSSLGSLEHLDLSYNYL-SNLSSSWFKPLSSLTFLNLLGN 134
Query: 206 DF-----GPKFPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSF 259
+ F L+K + + ++ I L++ +I +++ +
Sbjct: 135 PYKTLGETSLFSHLTKLQILRVGNMDTFTK-IQRKDFAGLTFLEELEIDASDLQS-YEPK 192
Query: 260 LF-SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
S+ ++ +L L Q L + + ++ + +E+ L
Sbjct: 193 SLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDL 234
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 9e-09
Identities = 36/203 (17%), Positives = 72/203 (35%), Gaps = 33/203 (16%)
Query: 119 ILTKLSNLKVL--------SLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-T 169
LS+L L +L L+ L L++L + + + +I +
Sbjct: 119 WFKPLSSLTFLNLLGNPYKTLGETSLFSHLTK-------LQILRVGNMDTFTKIQRKDFA 171
Query: 170 SLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDF---GPKFPSLSKNIVSVILR 224
L L+ + + + L S L+ + + L L F ++ ++ + LR
Sbjct: 172 GLTFLEELEIDASDLQ-SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELR 230
Query: 225 NNSLR----SEIPSG----LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276
+ L SE+ +G L + I+ + + L + +L L + NQL
Sbjct: 231 DTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQL 289
Query: 277 SEALPVNISCS-AKLNFVEISHN 298
++P I L + + N
Sbjct: 290 K-SVPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 19/147 (12%), Positives = 47/147 (31%), Gaps = 15/147 (10%)
Query: 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNLKSI 177
L+ L+ L + + L P + ++ L + + +++ +
Sbjct: 169 DFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECL 227
Query: 178 VLADNLLN---------GSVPDLQRLVLLEELNLGGNDF--GPKFPSLSKNIVSVILRNN 226
L D L+ G L + + + K + ++ + N
Sbjct: 228 ELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRN 287
Query: 227 SLRSEIPSG-LKNFDQLKQFDISSNNF 252
L+S +P G L++ + +N +
Sbjct: 288 QLKS-VPDGIFDRLTSLQKIWLHTNPW 313
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 3e-09
Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 24/161 (14%)
Query: 459 IGEGSQGQLYKGFLTDGS------RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G+++ + S V+VK LK + + ELL+ L+H H+V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
G C P + +V E++ +G L +L M+ + G Q
Sbjct: 83 YGVCG---DGDP-----LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 573 FLH--TGVAPG---IFGNN-----LKTENILLDKALTAKLS 603
LH + +A G + + L T N L+ L K+
Sbjct: 135 MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIG 175
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 3e-09
Identities = 50/298 (16%), Positives = 97/298 (32%), Gaps = 93/298 (31%)
Query: 458 LIGEGSQGQLYKGFLTD---GSRVSVKCLKLKQRHLPQSLM------QHVELLSKLRHRH 508
++G G +++ D V+VK L+ P + Q+ + L H
Sbjct: 19 ILGFGGMSEVHLA--RDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA---AALNHPA 73
Query: 509 LVSILGHCILTY---QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
+V++ Y + G ++V+E++ +LRD + + + + + +I
Sbjct: 74 IVAV-------YDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIA 123
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK---------LSGYNIPLPSKKGLE 616
A + + F H GI ++K NI++ K ++ + +
Sbjct: 124 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 617 ------SP--LRGQYVSNQPGDGAKEDVYQLGVILLQVITG--------------KQVKS 654
SP RG V A+ DVY LG +L +V+TG + V+
Sbjct: 181 GTAQYLSPEQARGDSV------DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 655 TSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP 712
PS + + + L+K+ R
Sbjct: 235 D--------------PIPPSARHEGLSADLD------------AVVLKALAKNPENRY 266
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 3e-09
Identities = 20/135 (14%), Positives = 55/135 (40%), Gaps = 14/135 (10%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGS----RVSVKCLK-LKQRHLPQSLMQHVE 499
I +IG+G G +Y G D + + ++K L + + ++ ++
Sbjct: 15 LIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGL 74
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
L+ L H ++++++G + ++L ++ +G L ++ +
Sbjct: 75 LMRGLNHPNVLALIGIML---PPEG----LPHVLLPYMCHGDLLQFIRS--PQRNPTVKD 125
Query: 560 RMAIIIGATRGVQFL 574
++ + RG+++L
Sbjct: 126 LISFGLQVARGMEYL 140
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 3e-09
Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP-QSLMQHVELLSKLRHRHLV 510
F IG+GS G+++KG V++K + L++ + + Q + +LS+ ++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
G +Y + +++++E++ GS D L + L Q I+ +G
Sbjct: 84 KYYG----SYLK----DTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKG 131
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+ +LH+ ++K N+LL + KL
Sbjct: 132 LDYLHSE---KKIHRDIKAANVLLSEHGEVKL 160
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 44/216 (20%), Positives = 81/216 (37%), Gaps = 46/216 (21%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQH---------VELLSKLRHRH 508
+G G+ G ++ V VK +K K++ L ++ + +LS++ H +
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIK-KEKVLEDCWIEDPKLGKVTLEIAILSRVEHAN 90
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLE-HISNGSLRDYLTDWKKKDMLKWPQRMAI---I 564
++ +L D LV+E H S L ++ + L P I +
Sbjct: 91 IIKVL--------DIFENQGFFQLVMEKHGSGLDLFAFID---RHPRLDEPLASYIFRQL 139
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLE----SP 618
+ A V +L I ++K ENI++ + T KL G L K +
Sbjct: 140 VSA---VGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTI 193
Query: 619 LRGQYV-----SNQPGDGAKEDVYQLGVILLQVITG 649
+Y P G + +++ LGV L ++
Sbjct: 194 ---EYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFE 226
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 3e-09
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 37/160 (23%)
Query: 459 IGEGSQGQLYKGFLTDGS-----RVSVKCLK----LKQRHLPQSLMQHVELLSKLRHRHL 509
IG G G++YKG L S V++K LK KQR + ++ + H ++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR---VDFLGEAGIMGQFSHHNI 108
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
+ + G + ++ E++ NG+L +L +K Q + ++ G
Sbjct: 109 IRLEGVIS--------KYKPMMIITEYMENGALDKFLR--EKDGEFSVLQLVGMLRGIAA 158
Query: 570 GVQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
G+++L H +A NIL++ L K+S
Sbjct: 159 GMKYLANMNYVHRDLA---------ARNILVNSNLVCKVS 189
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 4e-09
Identities = 44/224 (19%), Positives = 85/224 (37%), Gaps = 32/224 (14%)
Query: 74 NSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSA----NFNIDRFFT----ILTKLSN 125
++ V ++ K + F F S SL A D F I SN
Sbjct: 246 HTTVWYFSISNVK----LQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSN 301
Query: 126 LKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLN 185
+ + + G ++ L+ S+N + + L L++++L N L
Sbjct: 302 MNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK 361
Query: 186 GSVPDL----QRLVLLEELNLGGN-----DFGPKFPSLSKNIVSVILRNNSLRSEIPSGL 236
+ + ++ L++L++ N + K+++S+ + +N L I L
Sbjct: 362 -ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWT-KSLLSLNMSSNILTDTIFRCL 419
Query: 237 KNFDQLKQFDISSNNFVGPIQSF---LFSLPSILYLNLAGNQLS 277
++K D+ SN I+S + L ++ LN+A NQL
Sbjct: 420 --PPRIKVLDLHSNK----IKSIPKQVVKLEALQELNVASNQLK 457
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 7e-07
Identities = 26/172 (15%), Positives = 54/172 (31%), Gaps = 12/172 (6%)
Query: 149 SLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDF 207
L +L IS N I + + + + L+ + L+ N L + V L+ L+L N F
Sbjct: 46 KLRILIISHNRI-QYLDISVFKFNQELEYLDLSHNKLV-KIS-CHPTVNLKHLDLSFNAF 102
Query: 208 -----GPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFS 262
+F ++ + + L L + + + K + +
Sbjct: 103 DALPICKEFGNM-SQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKED--PEG 159
Query: 263 LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLN 314
L +L + I + + + + L S L+
Sbjct: 160 LQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLS 211
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 1e-06
Identities = 52/227 (22%), Positives = 88/227 (38%), Gaps = 30/227 (13%)
Query: 73 TNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQ-SLSANFNIDRFFTILTKLSNLKVLSL 131
+N + TV G + K S S N D F L+ L+ L L
Sbjct: 300 SNMNIKNFTVSGTRMVHM----LCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLIL 355
Query: 132 VSLGLWGPLPSKINRFW---SLEVLNISSNFI-YGEIPMEITSLKNLKSIVLADNLLNGS 187
L L SL+ L+IS N + Y E + + K+L S+ ++ N+L +
Sbjct: 356 QMNQL-KELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDT 414
Query: 188 VPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVS------VILRNNSLRSEIPSG-LKNFD 240
+ ++ L+L N K S+ K +V + + +N L+S +P G
Sbjct: 415 IFR-CLPPRIKVLDLHSN----KIKSIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLT 468
Query: 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287
L++ + +N + S P I YL+ N+ S+ + CS
Sbjct: 469 SLQKIWLHTNPWDC-------SCPRIDYLSRWLNKNSQKEQGSAKCS 508
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 4e-06
Identities = 37/211 (17%), Positives = 64/211 (30%), Gaps = 45/211 (21%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGND 206
+LNIS N+I +I SL L+ ++++ N + + + LE L+
Sbjct: 22 KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQ-YLDISVFKFNQELEYLD----- 75
Query: 207 FGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNF-VGPIQSFLFSLPS 265
L +N L I LK D+S N F PI ++
Sbjct: 76 ----------------LSHNKLVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQ 116
Query: 266 ILYLNLAGNQLSEA-----------------LPVNISCSAKLNFVEISHNLLIGKLPSCI 308
+ +L L+ L ++ + + L P+
Sbjct: 117 LKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNK 176
Query: 309 GSNSLNRTVVSTWNCLSGVNTKYQHPYSFCR 339
+ + V T L N K + C
Sbjct: 177 EFHFILDVSVKTVANLELSNIKCVLEDNKCS 207
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 4e-09
Identities = 36/195 (18%), Positives = 64/195 (32%), Gaps = 21/195 (10%)
Query: 119 ILTKLSNLKVLSLVSLGL-WGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
+ + L N+ + + L L L IS + IP ++ + L +
Sbjct: 142 VFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKL-TGIPKDL--PETLNEL 198
Query: 178 VLADNLLNGSVPD--LQRLVLLEELNLGGN---DFGPK-FPSLSKNIVSVILRNNSLRSE 231
L N + ++ L R L L LG N L + + L NN L S
Sbjct: 199 HLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLP-TLRELHLDNNKL-SR 255
Query: 232 IPSGLKNFDQLKQFDISSNNFVG-PIQSF-----LFSLPSILYLNLAGNQLSEAL--PVN 283
+P+GL + L+ + +NN + F ++L N + P
Sbjct: 256 VPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPAT 315
Query: 284 ISCSAKLNFVEISHN 298
C ++ +
Sbjct: 316 FRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 44/217 (20%), Positives = 79/217 (36%), Gaps = 44/217 (20%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNLKSIV 178
+ L L+ L + L +P + SL L I N I ++P + + L+N+ I
Sbjct: 98 FSPLRKLQKLYISKNHL-VEIPPNL--PSSLVELRIHDNRIR-KVPKGVFSGLRNMNCIE 153
Query: 179 LADNLL-NGSVPD-------LQRLVL---------------LEELNLGGNDF----GPKF 211
+ N L N L L + L EL+L N
Sbjct: 154 MGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDL 213
Query: 212 PSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLN 270
S + + L +N +R I +G L L++ + +N + + L L + +
Sbjct: 214 LRYS-KLYRLGLGHNQIRM-IENGSLSFLPTLRELHLDNNKLSR-VPAGLPDLKLLQVVY 270
Query: 271 LAGNQLSEALPVNISCS-------AKLNFVEISHNLL 300
L N +++ + VN C A N + + +N +
Sbjct: 271 LHTNNITK-VGVNDFCPVGFGVKRAYYNGISLFNNPV 306
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 5e-09
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 41/212 (19%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSIL 513
+GEGS G++ +V++K + LK+ + + + + L LRH H++ +
Sbjct: 16 TLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL- 74
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI---IIGATRG 570
+ ++T T + + +V+E+ G L DY+ +K + + II A
Sbjct: 75 -YDVIT------TPTDIVMVIEYA-GGELFDYIV---EKKRMTEDEGRRFFQQIICA--- 120
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY---NIPLPSKKGLE----SPLRGQY 623
+++ H I +LK EN+LLD L K++ + NI L+ SP Y
Sbjct: 121 IEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF-LKTSCGSP---NY 173
Query: 624 V-----SNQPGDGAKEDVYQLGVILLQVITGK 650
+ + G + DV+ G++L ++ G+
Sbjct: 174 AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 6e-09
Identities = 59/405 (14%), Positives = 111/405 (27%), Gaps = 143/405 (35%)
Query: 419 IDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTN----LIG--EGSQGQLYKGFL 472
D + V +S S EEI+ + D + L Q ++ + F+
Sbjct: 33 FDCKDVQDMPKSI---------LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFV 83
Query: 473 TDG---------SRVSVKCLKLKQRHLPQS--------LMQHVELLSKL---RHRHLVSI 512
+ S + + +Q + L ++ +K R +
Sbjct: 84 EEVLRINYKFLMSPIKTEQ---RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ-PYLK 139
Query: 513 LGHCILTYQDHPN--------TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
L +L + N +G T + L+ Y K + W +
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGKTW-VALD-----VCLSYKVQCKMDFKIFW-----LN 188
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG-YNIPLPSKKGLESPLRGQY 623
+ +P L+ +D T++ NI L +++ LR +
Sbjct: 189 LKNCN---------SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS-IQAELR-RL 237
Query: 624 VSNQPG-------DGAKEDVYQLGV---------ILL-----QVITGKQVKSTSEV---- 658
+ ++P +V ILL QV +T+ +
Sbjct: 238 LKSKPYENCLLVLL----NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293
Query: 659 --------DGLKLQLETCLAEAPSKLRAEA---DP--------SVRG---------TYAY 690
+ L L L P L E +P S+R
Sbjct: 294 HSMTLTPDEVKSL-LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC 352
Query: 691 DSLRTTVEITINCLSKDAAKRP----SI--EDV---------LWN 720
D L T +E ++N L ++ S+ +W
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 1e-04
Identities = 53/348 (15%), Positives = 99/348 (28%), Gaps = 125/348 (35%)
Query: 21 LVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTEL 80
L S+ LTP E + L K L+ D LP V T + L
Sbjct: 291 LDHHSMT-LTPDEVKSLL--LKYLDCRP-----QD------LPRE-----VLTTNPRR-L 330
Query: 81 TVIGN--KSSPAHS---PKPTFGKFS----ASQQSLSANFNIDRF--FTILTKLSNL--K 127
++I + A K + +S L F ++ +++
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI 390
Query: 128 VLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNG- 186
+LSL +W + M + + + S+V +
Sbjct: 391 LLSL----IWFDVIK--------------------SDVMVVVNKLHKYSLVEKQPKESTI 426
Query: 187 SVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQF- 245
S+P + + ++ N +L ++IV IP + D + +
Sbjct: 427 SIPSIYLELKVKLENE---------YALHRSIVD--------HYNIPKTFDSDDLIPPYL 469
Query: 246 DISSNNFVG-----PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
D + +G +L +++L+ F+E
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFLD-------------------FRFLE------ 504
Query: 301 IGKLPSCIGSNSLNRTVVSTWNCLSGV-NT-----KYQHPYSFCRKEA 342
K+ R + WN + NT Y+ PY C +
Sbjct: 505 -QKI----------RHDSTAWNASGSILNTLQQLKFYK-PY-ICDNDP 539
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 6e-04
Identities = 50/265 (18%), Positives = 94/265 (35%), Gaps = 85/265 (32%)
Query: 24 VSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVI 83
S+ L P+E R +F +L +P + +P + L ++ + +++ V+
Sbjct: 361 SSLNVLEPAEYRKMF--DRLSVFPP------S-AH---IP-TILLSLIWFDVIKSDVMVV 407
Query: 84 GNKSSPAHSPKPTFGKFS-ASQQSLSANFNI-DRFFTILTKLSNLKVL--SLV------- 132
NK K+S +Q + +I + + KL N L S+V
Sbjct: 408 VNK----------LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457
Query: 133 SLGLWGPLPSKINRFWSLEVLNISSNFI-YGEIPMEITSLKNLKSIVLADNLLNGSVPDL 191
+ +P +++++ + I + +LK+I + + L
Sbjct: 458 TFDSDDLIPPYLDQYF--------YSHIGH-----------HLKNIEHPERM------TL 492
Query: 192 QRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKN-FDQLKQFD--IS 248
R+V L DF +F L + I R++S + N QLK + I
Sbjct: 493 FRMVFL--------DF--RF--LEQKI-----RHDSTAWNASGSILNTLQQLKFYKPYIC 535
Query: 249 SNN-----FVGPIQSFLFSLPSILY 268
N+ V I FL + L
Sbjct: 536 DNDPKYERLVNAILDFLPKIEENLI 560
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 6e-09
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFLTDGS------RVSVKCLKLKQRHLPQSLMQHVELL 501
++ +GEG+ G+++ + V+VK LK Q + ELL
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 502 SKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+ L+H+H+V G C + P + +V E++ +G L +L
Sbjct: 98 TMLQHQHIVRFFGVCT---EGRP-----LLMVFEYMRHGDLNRFL 134
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 7e-09
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 31/165 (18%)
Query: 459 IGEGSQGQLYKGFLTDGS------RVSVKCLK----LKQRHLPQSLMQHVELLSKLRHRH 508
+GE G++YKG L + V++K LK R + L ++L+H +
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR---EEFRHEAMLRARLQHPN 73
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V +LG +D P + ++ + S+G L ++L + + A
Sbjct: 74 VVCLLGVV---TKDQP-----LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 125
Query: 569 RGVQFLH--TGVAPG---IFGNN-----LKTENILLDKALTAKLS 603
F+H +A G + ++ L T N+L+ L K+S
Sbjct: 126 EPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKIS 170
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 57.3 bits (138), Expect = 8e-09
Identities = 33/302 (10%), Positives = 80/302 (26%), Gaps = 64/302 (21%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRH-RHLVSI 512
++G+ + G V + + + + + V L LR ++
Sbjct: 80 VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 139
Query: 513 LGHC-------ILTYQDHPNTGS-----------TVFLVLE--HISNGSLRDYLTDWKKK 552
H ++ + F + + + + L
Sbjct: 140 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 199
Query: 553 D-MLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611
L R+ + + R + LH G+ L+ +I+LD+ L+G+ +
Sbjct: 200 HKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD 256
Query: 612 KKGLESPLRGQYVS---------------NQPGDGAKEDVYQLGVILLQVITGKQVKSTS 656
+ S + + + D + LG+++ +
Sbjct: 257 GARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD------ 310
Query: 657 EVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIED 716
L + + L + R+ + +R +E L R
Sbjct: 311 ----LPITKDAALGGSEWIFRSCKNIP-------QPVRALLE---GFLRYPKEDRLLPLQ 356
Query: 717 VL 718
+
Sbjct: 357 AM 358
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 9e-09
Identities = 51/339 (15%), Positives = 106/339 (31%), Gaps = 91/339 (26%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP-QSLMQHVELLSKLRHRH 508
+F+P +G G G +++ D ++K ++L R L + +M+ V+ L+KL H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 509 LV-------------------------------------------------SILGHCILT 519
+V +
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125
Query: 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVA 579
+ +++ ++ +L+D++ + + + I I V+FLH +
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH---S 182
Query: 580 PGIFGNNLKTENILLDKALTAKL-----------SGYNIPLPSKKGLESPLRGQ-----Y 623
G+ +LK NI K+ + + + GQ Y
Sbjct: 183 KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242
Query: 624 VS----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679
+S + K D++ LG+IL +++ + E + +R
Sbjct: 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFS--TQME-----------RVRIITDVRNL 289
Query: 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
P + Y V+ + LS +RP D++
Sbjct: 290 KFPLLFTQK-YPQEHMMVQ---DMLSPSPTERPEATDII 324
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 19/127 (14%)
Query: 459 IGEGSQGQLYKGFLTDGS------RVSVKCLK-LKQRHLPQSLMQHVELLSKLRHRHLVS 511
+G G+ G++Y+G ++ +V+VK L + + ++SK H+++V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL----TDWKKKDMLKWPQRMAIIIGA 567
+G + Q P F+++E ++ G L+ +L + L + +
Sbjct: 98 CIGVSL---QSLP-----RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 568 TRGVQFL 574
G Q+L
Sbjct: 150 ACGCQYL 156
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 30/202 (14%), Positives = 66/202 (32%), Gaps = 29/202 (14%)
Query: 389 RRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEE 448
++ Y + P ++ + P +
Sbjct: 9 HHDYDIPTTENLYFQGAMGS----ELQSPEYKLSKLRTSTIMTDYN-PNYCFAGKTSSIS 63
Query: 449 ATNNFDPTNL-----IGEGSQGQLYKGFLTDGS------RVSVKCLK-LKQRHLPQSLMQ 496
N+ +G G+ G++Y+G ++ +V+VK L + +
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 123
Query: 497 HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL----TDWKKK 552
++SK H+++V +G + Q P F++LE ++ G L+ +L +
Sbjct: 124 EALIISKFNHQNIVRCIGVSL---QSLP-----RFILLELMAGGDLKSFLRETRPRPSQP 175
Query: 553 DMLKWPQRMAIIIGATRGVQFL 574
L + + G Q+L
Sbjct: 176 SSLAMLDLLHVARDIACGCQYL 197
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 2e-08
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 459 IGEGSQGQLYKGFLTDG------SRVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVS 511
+GEG G++ K + V+VK LK + L+ +L ++ H H++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+ G C QD P + L++E+ GSLR +L
Sbjct: 91 LYGACS---QDGP-----LLLIVEYAKYGSLRGFL 117
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVE 499
L + + F+ L+G G+ GQ+YKG + G ++K + + + + Q +
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEIN 72
Query: 500 LLSKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
+L K HR++ + G + ++ P ++LV+E GS+ D + + K LK
Sbjct: 73 MLKKYSHHRNIATYYG-AFIK-KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN-TLKEE 129
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
I RG+ LH + ++K +N+LL + KL
Sbjct: 130 WIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKL 170
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 2e-08
Identities = 51/278 (18%), Positives = 104/278 (37%), Gaps = 58/278 (20%)
Query: 458 LIGEGSQGQLYKGFLTD---GSRVSVKCLKLKQRHLPQSLM------QHVELLSKLRHRH 508
+G G +Y D +V++K + + R ++L + S+L H++
Sbjct: 18 KLGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNS---SQLSHQN 72
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+VS++ D +LV+E+I +L +Y+ + L +
Sbjct: 73 IVSMI--------DVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQIL 121
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRG------- 621
G++ H I ++K +NIL+D T K+ + I +K E+ L
Sbjct: 122 DGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGI---AKALSETSLTQTNHVLGT 175
Query: 622 -QYVS-----NQPGDGAKEDVYQLGVILLQVITGKQ-VKSTSEVDGLKLQLETCLAEAPS 674
QY S + D D+Y +G++L +++ G+ + V ++ + +
Sbjct: 176 VQYFSPEQAKGEATD-ECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTT 234
Query: 675 KLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP 712
+R + S+ + + KD A R
Sbjct: 235 DVRKDIPQSLS------------NVILRATEKDKANRY 260
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 41/196 (20%), Positives = 67/196 (34%), Gaps = 29/196 (14%)
Query: 120 LTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSL 171
NL +L L + + L LE L++S N + L
Sbjct: 52 FRACRNLTILWLHSNVLARIDAAAFTGLAL-------LEQLDLSDNAQLRSVDPATFHGL 104
Query: 172 KNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFG--PK--FPSLSKNIVSVILRN 225
L ++ L L + + L L+ L L N P F L N+ + L
Sbjct: 105 GRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLG-NLTHLFLHG 162
Query: 226 NSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVN 283
N + S +P + L + + N + F L ++ L L N LS ALP
Sbjct: 163 NRISS-VPERAFRGLHSLDRLLLHQNRVAH-VHPHAFRDLGRLMTLYLFANNLS-ALPTE 219
Query: 284 I-SCSAKLNFVEISHN 298
+ L ++ ++ N
Sbjct: 220 ALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 7e-08
Identities = 37/174 (21%), Positives = 66/174 (37%), Gaps = 29/174 (16%)
Query: 120 LTKLSNLKVLSL--------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TS 170
T L+ L+ L L V + L L L++ + E+ +
Sbjct: 76 FTGLALLEQLDLSDNAQLRSVDPATFHGLGR-------LHTLHLDRCGL-QELGPGLFRG 127
Query: 171 LKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFG--PK--FPSLSKNIVSVILR 224
L L+ + L DN L ++PD + L L L L GN P+ F L ++ ++L
Sbjct: 128 LAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH-SLDRLLLH 185
Query: 225 NNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLF-SLPSILYLNLAGNQL 276
N + + ++ +L + +NN + + L ++ YL L N
Sbjct: 186 QNRVAH-VHPHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 19/149 (12%)
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLL 197
+P I + + + + N I + +NL + L N+L + L LL
Sbjct: 26 VPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVL-ARIDAAAFTGLALL 82
Query: 198 EELNLGGNDFGPKFPSLS-------KNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISS 249
E+L+L N + S+ + ++ L L+ + G + L+ +
Sbjct: 83 EQLDLSDN---AQLRSVDPATFHGLGRLHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQD 138
Query: 250 NNFVGPIQSFLFS-LPSILYLNLAGNQLS 277
N + F L ++ +L L GN++S
Sbjct: 139 NALQA-LPDDTFRDLGNLTHLFLHGNRIS 166
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 26/150 (17%)
Query: 119 ILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TS 170
L L L L + GL+ L + L+ L + N + +P +
Sbjct: 100 TFHGLGRLHTLHLDRCGLQELGPGLFRGLAA-------LQYLYLQDNAL-QALPDDTFRD 151
Query: 171 LKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFG--PK--FPSLSKNIVSVILR 224
L NL + L N ++ SVP+ + L L+ L L N F L ++++ L
Sbjct: 152 LGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG-RLMTLYLF 209
Query: 225 NNSLRSEIPSG-LKNFDQLKQFDISSNNFV 253
N+L + +P+ L L+ ++ N +V
Sbjct: 210 ANNLSA-LPTEALAPLRALQYLRLNDNPWV 238
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 457 NLIGEGSQGQLYKGFLTDGS---RVSVKCLK----LKQRHLPQSLMQHVELLSKL-RHRH 508
++IGEG+ GQ+ K + ++K +K + +E+L KL H +
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH---RDFAGELEVLCKLGHHPN 87
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
++++LG C ++L +E+ +G+L D+L
Sbjct: 88 IINLLGACE---HRGY-----LYLAIEYAPHGNLLDFL 117
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 15/95 (15%)
Query: 459 IGEGSQGQLYKGFLTDGS------RVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVS 511
+G+GS G +Y+G RV++K + + ++ + H+V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+LG Q P +++E ++ G L+ YL
Sbjct: 93 LLGVVS---QGQP-----TLVIMELMTRGDLKSYL 119
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 55.9 bits (134), Expect = 3e-08
Identities = 36/173 (20%), Positives = 60/173 (34%), Gaps = 42/173 (24%)
Query: 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSL--------EVLNISSNFIYGEIPMEITS 170
L S LK + + L SK S+ VL+++ + + +
Sbjct: 404 TLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDL--TVLCHLEQ 461
Query: 171 LKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS 230
L + + L+ N L P L L LE L N + +V
Sbjct: 462 LLLVTHLDLSHNRLRALPPALAALRCLEVLQASDN-----------ALENV--------- 501
Query: 231 EIPSGLKNFDQLKQFDISSNNFVGPIQSF-----LFSLPSILYLNLAGNQLSE 278
G+ N +L++ + +N +Q L S P ++ LNL GN L +
Sbjct: 502 ---DGVANLPRLQELLLCNNR----LQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 5e-08
Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 34/180 (18%)
Query: 119 ILTKLSNLKVLSL---------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT 169
+ L+ + V+ L + G + + L + I+ I IP +
Sbjct: 140 VFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK-------LSYIRIADTNI-TTIPQGL- 190
Query: 170 SLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN---DFGPK-FPSLSKNIVSVIL 223
+L + L N + V L+ L L +L L N + ++ + L
Sbjct: 191 -PPSLTELHLDGNKIT-KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTP-HLRELHL 247
Query: 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLF-----SLPSILYLNLAGNQLS 277
NN L +P GL + ++ + +NN F S ++L N +
Sbjct: 248 NNNKLVK-VPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 6e-08
Identities = 41/216 (18%), Positives = 78/216 (36%), Gaps = 41/216 (18%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNLKSIV 178
L L+ L L L LP K+ +L+ L + N I ++ + L + +
Sbjct: 96 FAPLVKLERLYLSKNQL-KELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLNQMIVVE 151
Query: 179 LADNLL-NGSVPD--LQRLVLLEELNLGGNDFG--PK--FPSL-----SKNIVSVI---- 222
L N L + + + Q + L + + + P+ PSL N ++ +
Sbjct: 152 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAAS 211
Query: 223 -----------LRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLN 270
L NS+ + + +G L N L++ +++N V + L I +
Sbjct: 212 LKGLNNLAKLGLSFNSISA-VDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVY 269
Query: 271 LAGNQLSE------ALPVNISCSAKLNFVEISHNLL 300
L N +S P + A + V + N +
Sbjct: 270 LHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 305
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 16/138 (11%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGN- 205
L V+ S + ++P ++ + + L +N + + D + L L L L N
Sbjct: 32 HLRVVQCSDLGL-EKVPKDLPP--DTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNK 87
Query: 206 --DFGPK-FPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFS 262
P F L + + L N L E+P + L++ + N ++ +F+
Sbjct: 88 ISKISPGAFAPL-VKLERLYLSKNQL-KELPEKM--PKTLQELRVHENEITK-VRKSVFN 142
Query: 263 -LPSILYLNLAGNQLSEA 279
L ++ + L N L +
Sbjct: 143 GLNQMIVVELGTNPLKSS 160
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 6e-08
Identities = 49/209 (23%), Positives = 79/209 (37%), Gaps = 25/209 (11%)
Query: 404 SVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNL----- 458
S P ++ M G ++ E DP L
Sbjct: 2 SYYHHHHHHDYDIPTTENLYFQGAMDPMPAGGRA-GSLKDPDVAELFFKDDPEKLFSDLR 60
Query: 459 -IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP---QSLMQHVELLSKLRHRHLVSIL 513
IG GS G +Y + + V++K + + Q +++ V L KLRH + +
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
G Y T +LV+E+ GS D L KK L+ + A+ GA +G+ +
Sbjct: 121 G----CYL----REHTAWLVMEYCL-GSASDLLEVHKKP--LQEVEIAAVTHGALQGLAY 169
Query: 574 LHTGVAPGIFGNNLKTENILLDKALTAKL 602
LH+ + ++K NILL + KL
Sbjct: 170 LHSH---NMIHRDVKAGNILLSEPGLVKL 195
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 6e-08
Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 21/98 (21%)
Query: 459 IGEGSQGQLYKGFLTDG------SRVSVKCLK----LKQRHLPQSLMQHVELLSKLRHRH 508
IGEG+ G++++ + V+VK LK + + L+++ + +
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ---ADFQREAALMAEFDNPN 111
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+V +LG C P + L+ E+++ G L ++L
Sbjct: 112 IVKLLGVCA---VGKP-----MCLLFEYMAYGDLNEFL 141
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 6e-08
Identities = 27/265 (10%), Positives = 65/265 (24%), Gaps = 58/265 (21%)
Query: 458 LIGEGSQGQLYKGFLTDGSR-VSVKCLKLKQRHLPQSL---MQHVELLSKLRHRHLVSIL 513
G Q ++ T R V++ + + L + LS++ + +L
Sbjct: 38 FHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVL 97
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
D +T + +V E I GSL++ + +
Sbjct: 98 --------DVVHTRAGGLVVAEWIRGGSLQEVA-----DTSPSPVGAIRAMQSLAAAADA 144
Query: 574 LHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLESPLRGQYVSNQPGDG 631
H G+ + + + L+ P
Sbjct: 145 AH---RAGVALSIDHPSRVRVSIDGDVVLAYPAT---------------------MPDAN 180
Query: 632 AKEDVYQLGVILLQVITGK---QVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTY 688
++D+ +G L ++ + + P+ + + +
Sbjct: 181 PQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQIS--- 237
Query: 689 AYDSLRTTVEITINCLSKDAAKRPS 713
+ + D R +
Sbjct: 238 ---------AVAARSVQGDGGIRSA 253
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 7e-08
Identities = 35/235 (14%), Positives = 81/235 (34%), Gaps = 51/235 (21%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCL-----------------KLKQRHLPQS 493
N++ + +G ++ ++K K+ +
Sbjct: 31 NDYRIIRTLNQGKFNKIILCEKD-NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89
Query: 494 LMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD---WK 550
+++++ +++ + ++ G V+++ E++ N S+ +
Sbjct: 90 FKNELQIITDIKNEYCLTCEGII--------TNYDEVYIIYEYMENDSILKFDEYFFVLD 141
Query: 551 KKDMLKWPQRMA--IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYN 606
K P ++ II ++H I ++K NIL+DK KLS G +
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 607 IPLPSKK-----GLESPLRGQYVS------NQPGDGAKEDVYQLGVILLQVITGK 650
+ KK G + +++ +GAK D++ LG+ L +
Sbjct: 200 EYMVDKKIKGSRG--TY---EFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 7e-08
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 21/99 (21%)
Query: 459 IGEGSQGQLYKGFLTD------GSRVSVKCLK----LKQRHLPQSLMQHVELLSKL-RHR 507
+G G+ GQ+ + V+VK LK + ++LM +++L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH---RALMSELKILIHIGHHL 91
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
++V++LG C T P + +++E G+L YL
Sbjct: 92 NVVNLLGAC--TKPGGP-----LMVIVEFCKFGNLSTYL 123
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 54.3 bits (130), Expect = 8e-08
Identities = 34/301 (11%), Positives = 79/301 (26%), Gaps = 63/301 (20%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSL------MQHVELLSKLRH---- 506
++G+ + G V +R ++ + + LL +++
Sbjct: 85 VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 144
Query: 507 -RHLVSILGHCILTYQDHPNTGS-----------TVFLVLE--HISNGSLRDYLTDWKKK 552
HL I ++ + F + + + + L
Sbjct: 145 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 204
Query: 553 D-MLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611
L R+ + + R + LH G+ L+ +I+LD+ L+G+ +
Sbjct: 205 HKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD 261
Query: 612 KKGLE-------------SPLRGQYVSNQPGDGAKE-DVYQLGVILLQVITGKQVKSTSE 657
+ + + P D + LG+ + +
Sbjct: 262 GASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD------- 314
Query: 658 VDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDV 717
L + L + R+ + +R +E L R
Sbjct: 315 ---LPNTDDAALGGSEWIFRSCKNIP-------QPVRALLE---GFLRYPKEDRLLPLQA 361
Query: 718 L 718
+
Sbjct: 362 M 362
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 9e-08
Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 53/250 (21%)
Query: 425 PQTMRSAAIGLP-PFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKC 482
P +M P F S + + ++G+GS G++ G +VK
Sbjct: 2 PGSMMDHLHATPGMFVQHSTAIFSD---RYKGQRVLGKGSFGEVILCKDKITGQECAVKV 58
Query: 483 L---KLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISN 539
+ ++KQ+ +SL++ V+LL +L H +++ + ++D +LV E +
Sbjct: 59 ISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE----FFEDKGY----FYLVGEVYTG 110
Query: 540 GSLRDYLTDWKKKDMLKWPQRMA--IIIGATRGVQFLHTGVAPGIFGNNLKTENILLD-- 595
G L D + +K ++ + A II G+ ++H I +LK EN+LL+
Sbjct: 111 GELFDEII--SRK---RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESK 162
Query: 596 ------KAL---TAKLSGYNIPLPSKKGLESP-------LRGQYVSNQPGDGAKEDVYQL 639
+ + + + + K G + L G Y K DV+
Sbjct: 163 SKDANIRIIDFGLSTHFEASKKMKDKIG--TAYYIAPEVLHGTY-------DEKCDVWST 213
Query: 640 GVILLQVITG 649
GVIL +++G
Sbjct: 214 GVILYILLSG 223
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 25/166 (15%), Positives = 59/166 (35%), Gaps = 18/166 (10%)
Query: 149 SLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN 205
++ + +S + ++ +L + I + + + L+ L LL+ L +
Sbjct: 56 NISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT 115
Query: 206 DF-----GPKFPSLSKNIVSVILRNNSLRSEIP----SGLKNFDQLKQFDISSNNFVGPI 256
K S + I N + S IP GL N + + +N F +
Sbjct: 116 GLKMFPDLTKVYSTDIFFILEITDNPYMTS-IPVNAFQGLCN--ETLTLKLYNNGFTS-V 171
Query: 257 QSFLFSLPSILYLNLAGNQLSEALPVNI--SCSAKLNFVEISHNLL 300
Q + F+ + + L N+ + + + + +++S +
Sbjct: 172 QGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSV 217
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 9e-05
Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 5/108 (4%)
Query: 211 FPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILY 268
PSL + ++ L LR+ IPS N + + +S + + ++S F L + +
Sbjct: 26 IPSLPPSTQTLKLIETHLRT-IPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTH 84
Query: 269 LNLAGNQLSEALPVNI-SCSAKLNFVEISHNLLIGKLPSCIGSNSLNR 315
+ + + + + L F+ I + + P S +
Sbjct: 85 IEIRNTRNLTYIDPDALKELPLLKFLGIFNT-GLKMFPDLTKVYSTDI 131
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 55/296 (18%), Positives = 115/296 (38%), Gaps = 52/296 (17%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP-QSLMQHVELLSKLRHRH 508
++++ +IG G+ + + +V++K + L++ L++ ++ +S+ H +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP----QRMAII 564
+VS ++ ++LV++ +S GS+ D + K K +A I
Sbjct: 75 IVSYYT----SFVV----KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 565 IGAT-RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL----------SGYNIPLPSKK 613
+ G+++LH G ++K NILL + + ++ +G +I
Sbjct: 127 LREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV- 182
Query: 614 GLESPLRGQYV-----------SNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLK 662
R +V G K D++ G+ +++ TG + +K
Sbjct: 183 ------RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA--APYHKYPPMK 234
Query: 663 LQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ + T L P L S R + + CL KD KRP+ ++L
Sbjct: 235 VLMLT-LQNDPPSLETGVQDKEMLKKYGKSFRKMISL---CLQKDPEKRPTAAELL 286
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 53.8 bits (129), Expect = 1e-07
Identities = 49/321 (15%), Positives = 92/321 (28%), Gaps = 64/321 (19%)
Query: 450 TNNFDPTNLIGEG--SQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKL 504
++ +IG+G + G V+V+ + L+ + L + +
Sbjct: 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF 83
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V T+ + +++V ++ GS +D L D + I+
Sbjct: 84 NHPNIVPYRA----TFI----ADNELWVVTSFMAYGSAKD-LICTHFMDGMNELAIAYIL 134
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN-----IPLPSKKGLESPL 619
G + + ++H G ++K +IL+ LSG I ++ +
Sbjct: 135 QGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDF 191
Query: 620 RGQYV------------SNQPGDGAKEDVYQLGVILLQVITGK------------QVKST 655
V N G AK D+Y +G+ ++ G K
Sbjct: 192 PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN 251
Query: 656 SEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITIN------------- 702
V L E S S
Sbjct: 252 GTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFH 311
Query: 703 -----CLSKDAAKRPSIEDVL 718
CL ++ RPS +L
Sbjct: 312 HFVEQCLQRNPDARPSASTLL 332
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 42/204 (20%), Positives = 76/204 (37%), Gaps = 40/204 (19%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
IG G+ G V+VK ++ + + +++ + + LRH ++V
Sbjct: 27 DIGSGNFGVARLMRDKLTKELVAVKYIE-RGAAIDENVQREIINHRSLRHPNIVR-FKEV 84
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI---IIGATRGVQF 573
ILT + + +++E+ S G L + + + ++ V +
Sbjct: 85 ILT-------PTHLAIIMEYASGGELYERIC---NAGRFSEDEARFFFQQLLSG---VSY 131
Query: 574 LHTGVAPGIFGNNLKTENILLD--KALTAKLS--GY-NIPLPSKKGLE----SPLRGQYV 624
H + I +LK EN LLD A K+ GY + + + +P Y+
Sbjct: 132 CH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-PKSTVGTP---AYI 184
Query: 625 -----SNQPGDGAKEDVYQLGVIL 643
Q DG DV+ GV L
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTL 208
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 27/110 (24%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFLTDGS------RVSVKCLK----LKQRHLPQSLMQH 497
F NL +G G+ G++ S +V+VK LK +R ++LM
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER---EALMSE 98
Query: 498 VELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
++++++L H ++V++LG C P ++L+ E+ G L +YL
Sbjct: 99 LKMMTQLGSHENIVNLLGACT---LSGP-----IYLIFEYCCYGDLLNYL 140
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 3e-07
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRH 508
+ +GEG+ G +YK + G V++K ++L +P + ++ + LL +L H +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+VS+ ++ + + LV E + L+ L + K L+ Q +
Sbjct: 81 IVSL--IDVIH------SERCLTLVFEFMEK-DLKKVLDE--NKTGLQDSQIKIYLYQLL 129
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
RGV H I +LK +N+L++ KL
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSDGALKL 160
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 21/214 (9%)
Query: 388 IRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIE 447
+ K +G D + + A ++ + + + + I PP F +
Sbjct: 21 FQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPP-APFDHRIVT 79
Query: 448 EATNNF------DPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVEL 500
T ++G G GQ++K G +++ K +K + + + + +
Sbjct: 80 AKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISV 139
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR 560
+++L H +L+ + ++ + + LV+E++ G L D + D + L
Sbjct: 140 MNQLDHANLIQLYD----AFESKND----IVLVMEYVDGGELFDRIID--ESYNLTELDT 189
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
+ + G++ +H I +LK ENIL
Sbjct: 190 ILFMKQICEGIRHMHQM---YILHLDLKPENILC 220
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 48/175 (27%)
Query: 457 NLIGEGSQGQLYKGFLTD------GSRVSVKCLK----LKQRHLPQSLMQHVELLSKL-R 505
+G G+ G++ + +V+VK LK ++ ++LM ++++S L +
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK---EALMSELKIMSHLGQ 108
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL-----------TDWKKKDM 554
H ++V++LG C P V ++ E+ G L ++L
Sbjct: 109 HENIVNLLGACT---HGGP-----VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 555 LKWPQRMAIIIGATRGVQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ +G+ FL H VA N+LL AK+
Sbjct: 161 ASTRDLLHFSSQVAQGMAFLASKNCIHRDVA---------ARNVLLTNGHVAKIG 206
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 3e-07
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 24/101 (23%)
Query: 459 IGEGSQGQLYKGFLTD--------GSRVSVKCLK----LKQRHLPQSLMQHVELLSKL-R 505
+GEG+ GQ+ ++V+VK LK K L+ +E++ + +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL---SDLISEMEMMKMIGK 133
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
H++++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 134 HKNIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 166
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 4e-07
Identities = 29/205 (14%), Positives = 77/205 (37%), Gaps = 14/205 (6%)
Query: 391 SKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEAT 450
+ D+ +R + +G + I + + +
Sbjct: 97 TAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVL 156
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
+++D +G G+ G +++ G+ + K + +++ + ++ +S LRH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
V++ ++D + ++ E +S G L + + D + + + + + + +
Sbjct: 217 VNLHD----AFEDDNE----MVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCK 266
Query: 570 GVQFLHTGVAPGIFGNNLKTENILL 594
G+ +H +LK ENI+
Sbjct: 267 GLCHMHEN---NYVHLDLKPENIMF 288
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 4e-07
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 18/98 (18%)
Query: 459 IGEGSQGQLYKGFLTD--------GSRVSVKCLKLK-QRHLPQSLMQHVELLSKL-RHRH 508
+GEG+ GQ+ V+VK LK L+ +E++ + +H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 103 IINLLGACT---QDGP-----LYVIVEYASKGNLREYL 132
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 5e-07
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 112 NIDRFFTILTKLSNLKVLSL--VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT 169
N + + + NL+ LSL V L LP + L+ L +S N I+G + M
Sbjct: 37 NDGKIEGLTAEFVNLEFLSLINVGLISVSNLP----KLPKLKKLELSENRIFGGLDMLAE 92
Query: 170 SLKNLKSIVLADNLLN--GSVPDLQRLVLLEELNLGGN 205
L NL + L+ N L ++ L++L L+ L+L
Sbjct: 93 KLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 5e-07
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 18/98 (18%)
Query: 459 IGEGSQGQLYKGFLTD--------GSRVSVKCLKLK-QRHLPQSLMQHVELLSKL-RHRH 508
+GEG GQ+ V+VK LK L+ +E++ + +H++
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 149 IINLLGACT---QDGP-----LYVIVEYASKGNLREYL 178
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 6e-07
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 459 IGEGSQGQLYKGFLTD------GSRVSVKCLK----LKQRHLPQSLMQHVELLSKL-RHR 507
+G G+ G++ + V+VK LK L +R ++LM +++LS L H
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER---EALMSELKVLSYLGNHM 87
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
++V++LG C P ++ E+ G L ++L
Sbjct: 88 NIVNLLGACT---IGGP-----TLVITEYCCYGDLLNFL 118
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 6e-07
Identities = 30/154 (19%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRH 508
+ IGEG+ G +YK G ++K ++L++ +P + ++ + +L +L+H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V + + ++ T + LV EH+ L+ L + L+ + ++
Sbjct: 62 IVKL--YDVIH------TKKRLVLVFEHLDQ-DLKKLLDV--CEGGLESVTAKSFLLQLL 110
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
G+ + H + +LK +N+L+++ K+
Sbjct: 111 NGIAYCHDR---RVLHRDLKPQNLLINREGELKI 141
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 7e-07
Identities = 21/99 (21%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 112 NIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKIN---RFWSLEVLNISSNFIYGEIPMEI 168
N + + + L+ LS +++GL + I + L+ L +S N + G + +
Sbjct: 30 NEGKLEGLTDEFEELEFLSTINVGL-----TSIANLPKLNKLKKLELSDNRVSGGLEVLA 84
Query: 169 TSLKNLKSIVLADNLLN--GSVPDLQRLVLLEELNLGGN 205
NL + L+ N + ++ L++L L+ L+L
Sbjct: 85 EKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 6e-05
Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 25/131 (19%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG 208
L + N SN ++ + L+ + + L S+ +L +L L++L L
Sbjct: 21 ELVLDNSRSNEG--KLEGLTDEFEELEFLSTINVGLT-SIANLPKLNKLKKLEL------ 71
Query: 209 PKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ-SFLFSLPSIL 267
+N + + + L ++S N L L ++
Sbjct: 72 ---------------SDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLK 116
Query: 268 YLNLAGNQLSE 278
L+L +++
Sbjct: 117 SLDLFNCEVTN 127
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 7e-07
Identities = 48/264 (18%), Positives = 90/264 (34%), Gaps = 54/264 (20%)
Query: 411 VRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKG 470
+ + R F + E + +G G+ G++
Sbjct: 1 MHHHHHHS-SGRENLYFQGDLQATPGMFITSKKGHLSE---MYQRVKKLGSGAYGEVLLC 56
Query: 471 F-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526
++K + + L++ V +L L H +++ + ++D N
Sbjct: 57 RDKVTHVERAIKIIRKTSVSTSSN-SKLLEEVAVLKLLDHPNIMKLYD----FFEDKRN- 110
Query: 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--IIIGATRGVQFLHTGVAPGIFG 584
+LV+E G L D + + K+ + A II GV +LH I
Sbjct: 111 ---YYLVMECYKGGELFDEII--HRM---KFNEVDAAVIIKQVLSGVTYLH---KHNIVH 159
Query: 585 NNLKTENILLD--------KAL---TAKLSGYNIPLPSKKGLESP-------LRGQYVSN 626
+LK EN+LL+ K + + + + + G + LR +Y
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLG--TAYYIAPEVLRKKY--- 214
Query: 627 QPGDGAKEDVYQLGVILLQVITGK 650
K DV+ +GVIL ++ G
Sbjct: 215 ----DEKCDVWSIGVILFILLAGY 234
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 7e-07
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 17/159 (10%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRH 506
+++ F +G G+ +YKG T G V++K +KL P + ++ + L+ +L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM---LKWPQRMAI 563
++V + + ++ T + + LV E + N L+ Y+ + L+
Sbjct: 63 ENIVRL--YDVIH------TENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYF 113
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+G+ F H I +LK +N+L++K KL
Sbjct: 114 QWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKL 149
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 8e-07
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 50/224 (22%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP---------QSLMQHVE 499
N++P ++G G + + +VK + + ++ ++ V+
Sbjct: 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 500 LLSKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------K 552
+L K+ H +++ + TY+ + FLV + + G L DYLT+ +
Sbjct: 76 ILRKVSGHPNIIQLKD----TYETNTF----FFLVFDLMKKGELFDYLTEKVTLSEKETR 127
Query: 553 DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLP 610
+++ ++ + LH I +LK ENILLD + KL+ G++ L
Sbjct: 128 KIMR------ALLEV---ICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175
Query: 611 SKKGLE----SP-------LRGQYVSNQPGDGAKEDVYQLGVIL 643
+ L +P + N PG G + D++ GVI+
Sbjct: 176 PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 9e-07
Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 38/170 (22%)
Query: 119 ILTKLSNLKVLSLVSLGLWGP------LPSKINRFWSLEVLNISSNFIYGEIPME-ITSL 171
I + ++ + L G + + ++ + + L +S+N I +I ++ +
Sbjct: 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNI-EKI--SSLSGM 69
Query: 172 KNLKSIVLADNLLNGSVPDLQRLV-LLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS 230
+NL+ + L NL+ + +L + LEEL + N I S+
Sbjct: 70 ENLRILSLGRNLIK-KIENLDAVADTLEELWISYN-----------QIASL--------- 108
Query: 231 EIPSGLKNFDQLKQFDISSNNFVGPIQSF--LFSLPSILYLNLAGNQLSE 278
SG++ L+ + SNN + L +L + L LAGN L
Sbjct: 109 ---SGIEKLVNLRVLYM-SNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 9e-07
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHR 507
NF IGEG+ G +YK G V++K ++L +P + ++ + LL +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 63 NIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQL 112
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+G+ F H+ + +LK +N+L++ KL
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKL 144
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 1e-06
Identities = 41/234 (17%), Positives = 76/234 (32%), Gaps = 22/234 (9%)
Query: 118 TILTKLSNLKVLSLVSLGLWGPLPSKI-NRFWSLEVLNISSNFIYGEIPMEI-TSLKNLK 175
T ++L +L+ L + + + SL +L + N ++ L NL+
Sbjct: 48 TSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQF-LQLETGAFNGLANLE 106
Query: 176 SIVLADNLLNGS-VPD--LQRLVLLEELNLGGN-----DFGPKFPSLSKNIVSVILRNNS 227
+ L L+G+ + + L LE L L N F ++ + L N
Sbjct: 107 VLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMR-RFHVLDLTFNK 165
Query: 228 LRSEIPSGLKNF----------DQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277
++S L NF + D++ F SI L+L+GN
Sbjct: 166 VKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFK 225
Query: 278 EALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKY 331
E++ + ++ + S G + T+ L K
Sbjct: 226 ESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKT 279
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 30/215 (13%), Positives = 70/215 (32%), Gaps = 35/215 (16%)
Query: 118 TILTKLSNLKVLSL-------VSLGLWGPLPSK---INRFWSLEVLNISSNFIYGEIPME 167
+ + VL L + K + R S+ + +++ ++ E
Sbjct: 148 SFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGN 207
Query: 168 ITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI--- 222
++ ++ L+ N S+ + + +L ++ S
Sbjct: 208 PFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNF 267
Query: 223 --------------LRNNSLRSEIPSGL-KNFDQLKQFDISSNNFVGPIQSFLF-SLPSI 266
L + + + + + +F L+Q ++ N I F L +
Sbjct: 268 TFKGLEASGVKTCDLSKSKIFA-LLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHL 325
Query: 267 LYLNLAGNQLSEALPVNI-SCSAKLNFVEISHNLL 300
L LNL+ N L + + KL +++S+N +
Sbjct: 326 LKLNLSQNFLGS-IDSRMFENLDKLEVLDLSYNHI 359
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 33/190 (17%), Positives = 64/190 (33%), Gaps = 40/190 (21%)
Query: 95 PTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154
F A + + + + + + + + G S ++ +
Sbjct: 228 MAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEAS------GVKTCD 281
Query: 155 ISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKF 211
+S + I + + + +L+ + LA N +N + D L L +LNL N
Sbjct: 282 LSKSKI-FALLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQNFL---- 335
Query: 212 PSLSKNIVSVILRNNSLRSEIPSGLKNFD---QLKQFDISSNNFVGPIQSFLFS-LPSIL 267
I S + F+ +L+ D+S N+ + F LP++
Sbjct: 336 ------------------GSIDSRM--FENLDKLEVLDLSYNHI-RALGDQSFLGLPNLK 374
Query: 268 YLNLAGNQLS 277
L L NQL
Sbjct: 375 ELALDTNQLK 384
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 8e-04
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 18/115 (15%)
Query: 149 SLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN 205
LE L ++ N I +I L +L + L+ N L GS+ + L LE L+L N
Sbjct: 300 DLEQLTLAQNEI-NKIDDNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYN 357
Query: 206 DFGPKFPSLSK-------NIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNF 252
+L N+ + L N L+S +P G L++ + +N +
Sbjct: 358 ----HIRALGDQSFLGLPNLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPW 407
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 57/283 (20%), Positives = 109/283 (38%), Gaps = 50/283 (17%)
Query: 390 RSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEA 449
R + + + + K + + + ++G P +E
Sbjct: 34 REQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMG-PEDELPDWAAAKEF 92
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQH--------VEL 500
+DP ++IG G + + G +VK +++ L ++ +
Sbjct: 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHI 152
Query: 501 LSKLR-HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------KD 553
L ++ H H+++++ +Y+ +FLV + + G L DYLT+ +
Sbjct: 153 LRQVAGHPHIITLID----SYESSSF----MFLVFDLMRKGELFDYLTEKVALSEKETRS 204
Query: 554 MLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPS 611
+++ ++ A V FLH A I +LK ENILLD + +LS G++ L
Sbjct: 205 IMR------SLLEA---VSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP 252
Query: 612 KKGLE----SP-------LRGQYVSNQPGDGAKEDVYQLGVIL 643
+ L +P L+ PG G + D++ GVIL
Sbjct: 253 GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 40/265 (15%), Positives = 95/265 (35%), Gaps = 23/265 (8%)
Query: 53 WTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPK-------PTFGKFSASQQ 105
+ + L + + +T+ +++ S K +
Sbjct: 227 NIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNL 286
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP 165
+++ + + F T L +L + + + + + F + + +S +
Sbjct: 287 TITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHM 346
Query: 166 MEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFG--PKFPSLSKNIVSVI 222
+ S + + N+ SV L L+ L L N K ++KN+ S+
Sbjct: 347 VCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLE 406
Query: 223 LRNNSLRSEIPSGLKNF-----DQLKQFDISSNNFVGPIQSFLF-SLPSIL-YLNLAGNQ 275
+ SL S + S + + + ++SSN + +F LP + L+L N+
Sbjct: 407 TLDVSLNS-LNSHAYDRTCAWAESILVLNLSSNM----LTGSVFRCLPPKVKVLDLHNNR 461
Query: 276 LSEALPVNISCSAKLNFVEISHNLL 300
+ ++P +++ L + ++ N L
Sbjct: 462 IM-SIPKDVTHLQALQELNVASNQL 485
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 4e-04
Identities = 30/151 (19%), Positives = 65/151 (43%), Gaps = 19/151 (12%)
Query: 164 IPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGN-----DFGPKFPSLSK 216
+P ++ K++ L+ N ++ + D+ L L L L N DF F +
Sbjct: 46 VPKDLPP--RTKALSLSQNSIS-ELRMPDISFLSELRVLRLSHNRIRSLDFHV-FLFN-Q 100
Query: 217 NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNF-VGPIQSFLFSLPSILYLNLAGNQ 275
++ + + +N L++ I L+ D+S N+F V P+ +L + +L L+ +
Sbjct: 101 DLEYLDVSHNRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAK 157
Query: 276 LSEALPVNISCSAKLNFVEISHNLLIGKLPS 306
+ +++ A L+ I +L+ +
Sbjct: 158 FRQ---LDLLPVAHLHLSCILLDLVSYHIKG 185
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 5e-04
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 110 NFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT 169
+ N + ++ VL+L S L G + + ++VL++ +N I IP ++T
Sbjct: 414 SLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPP--KVKVLDLHNNRI-MSIPKDVT 470
Query: 170 SLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDF 207
L+ L+ + +A N L SVPD RL L+ + L N +
Sbjct: 471 HLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPW 509
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 23/172 (13%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
+++ ++ L LP + +L++S N +Y + L + L
Sbjct: 9 VASHLEVNCDKRNL-TALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 183 LLNGSVPDLQRLVLLEELNLGGNDFG---PKFPSLSKNIVSVILRNNSLRSEIPSGLKNF 239
L + L +L L+L N +L + + + N L S +P G
Sbjct: 66 ELT-KLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLP-ALTVLDVSFNRLTS-LPLGA--L 120
Query: 240 D---QLKQFDISSNNFVGPIQSF---LF-SLPSILYLNLAGNQLSEALPVNI 284
+L++ + N +++ L P + L+LA N L+ LP +
Sbjct: 121 RGLGELQELYLKGNE----LKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGL 167
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 2e-06
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHR 507
++ IGEG+ G ++K V++K ++L +P S ++ + LL +L+H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V + H +L + + LV E L+ Y L + +
Sbjct: 62 NIVRL--HDVLH------SDKKLTLVFEFCDQ-DLKKYFDS--CNGDLDPEIVKSFLFQL 110
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+G+ F H+ + +LK +N+L+++ KL
Sbjct: 111 LKGLGFCHSR---NVLHRDLKPQNLLINRNGELKL 142
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 32/207 (15%), Positives = 76/207 (36%), Gaps = 43/207 (20%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
+G G+ G ++ + G +K + K + + + + +E+L L H +++ I
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE-- 87
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--IIIGATRGVQFL 574
++D+ N +++V+E G L + + + + ++ + +
Sbjct: 88 --VFEDYHN----MYIVMETCEGGELLERIVS-AQARGKALSEGYVAELMKQMMNALAYF 140
Query: 575 HTGVAPGIFGNNLKTENILLD--------KAL---TAKLSGYNIPLPSKKGLESP----- 618
H + + +LK ENIL K + A+L + + G +
Sbjct: 141 H---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAG--TALYMAP 195
Query: 619 --LRGQYVSNQPGDGAKEDVYQLGVIL 643
+ K D++ GV++
Sbjct: 196 EVFKRDV-------TFKCDIWSAGVVM 215
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 3e-06
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 50/224 (22%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLR 505
++ ++G+GS G++ K +VK + K + ++++ VELL KL
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLD 79
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--I 563
H +++ + +D + ++V E + G L D + K+K ++ + A I
Sbjct: 80 HPNIMKLFE----ILEDSSS----FYIVGELYTGGELFDEII--KRK---RFSEHDAARI 126
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLD--------KAL---TAKLSGYNIPLPSK 612
I G+ ++H I +LK ENILL+ K + + N + +
Sbjct: 127 IKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 613 KGLESP-------LRGQYVSNQPGDGAKEDVYQLGVILLQVITG 649
G + LRG Y K DV+ GVIL +++G
Sbjct: 184 IG--TAYYIAPEVLRGTY-------DEKCDVWSAGVILYILLSG 218
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 42/224 (18%), Positives = 83/224 (37%), Gaps = 58/224 (25%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQ---HVELLSKLRHR--H 508
L+G G G +Y G ++D V++K + ++ + + V LL K+
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISN-GSLRDYLTDWKKKDMLKWPQRMAI---- 563
++ +L D + L+LE L D++T ++ + + +A
Sbjct: 110 VIRLL--------DWFERPDSFVLILERPEPVQDLFDFIT--ERGAL---QEELARSFFW 156
Query: 564 -IIGATRGVQFLHTGVAPGIFGNNLKTENILLD-KALTAKLSGYNIPLPSKKGLESPLRG 621
++ A V+ H G+ ++K ENIL+D KL + G + L+
Sbjct: 157 QVLEA---VRHCH---NCGVLHRDIKDENILIDLNRGELKLIDF--------GSGALLKD 202
Query: 622 Q---------------YVSNQPGDGAKEDVYQLGVILLQVITGK 650
++ G V+ LG++L ++ G
Sbjct: 203 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 246
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 41/213 (19%)
Query: 458 LIGEGSQGQLYKGFLTDGSR-VSVKCLKLKQRHLPQSLM------QHVELLSKLRHRHLV 510
L+G G G +Y+ T R V++K + P + +L+ H+V
Sbjct: 41 LVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTA---GRLQEPHVV 97
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
I + D +++ + I+ L L +++ L P+ +AI+
Sbjct: 98 PI-------H-DFGEIDGQLYVDMRLINGVDLAAML---RRQGPLAPPRAVAIVRQIGSA 146
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRG--------Q 622
+ H A G ++K ENIL+ A L + I + + L
Sbjct: 147 LDAAH---AAGATHRDVKPENILVSADDFAYLVDFGI---ASATTDEKLTQLGNTVGTLY 200
Query: 623 YVS-----NQPGDGAKEDVYQLGVILLQVITGK 650
Y++ + D+Y L +L + +TG
Sbjct: 201 YMAPERFSESHAT-YRADIYALTCVLYECLTGS 232
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 4e-06
Identities = 43/225 (19%), Positives = 83/225 (36%), Gaps = 49/225 (21%)
Query: 440 GFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHV 498
G + +I + + N IG GS G++ R + K + Q +
Sbjct: 1 GSTKGDINQ---YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEI 57
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
E++ L H +++ + T++D+ + ++LV+E + G L + + K+ +
Sbjct: 58 EIMKSLDHPNIIRLYE----TFEDNTD----IYLVMELCTGGELFERVV--HKR---VFR 104
Query: 559 QRMA--IIIGATRGVQFLHTGVAPGIFGNNLKTENILLD--------KAL---TAKLSGY 605
+ A I+ V + H + +LK EN L K + A
Sbjct: 105 ESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161
Query: 606 NIPLPSKKGLESP-------LRGQYVSNQPGDGAKEDVYQLGVIL 643
+ +K G +P L G Y G + D + GV++
Sbjct: 162 GKMMRTKVG--TPYYVSPQVLEGLY-------GPECDEWSAGVMM 197
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 4e-06
Identities = 34/172 (19%), Positives = 73/172 (42%), Gaps = 21/172 (12%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNIS-SNFIYGEIPMEI-TSLKNLKSIVLA 180
+S VL ++ ++ LP L + I +N + I E +L NL+ ++++
Sbjct: 61 ISQNDVLEVIEADVFSNLPK-------LHEIRIEKANNLL-YINPEAFQNLPNLQYLLIS 112
Query: 181 DNLLNGSVPDL--QRLVLLEELNLGGNDF-----GPKFPSLSKNIVSVILRNNSLRSEIP 233
+ + +PD+ + L++ N F LS V + L N ++ I
Sbjct: 113 NTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IH 170
Query: 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNI 284
+ N QL + ++S NN + + + +F + L+++ ++ +LP
Sbjct: 171 NSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYG 221
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 40/184 (21%)
Query: 486 KQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDY 545
+ R + + Q + +L KL H ++V + +L D PN +++V E ++ G + +
Sbjct: 75 QPRGPIEQVYQEIAILKKLDHPNVVKL--VEVL---DDPNE-DHLYMVFELVNQGPVMEV 128
Query: 546 LTDWKKKDML--KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
T + + Q +I G +++LH I ++K N+L+ + K++
Sbjct: 129 PTLKPLSEDQARFYFQD--LIKG----IEYLH---YQKIIHRDIKPSNLLVGEDGHIKIA 179
Query: 604 GY---NIPLPSKKGLE----SP----------LRGQYVSNQPGDGAKEDVYQLGVILLQV 646
+ N S L +P R + G DV+ +GV L
Sbjct: 180 DFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIF------SGKALDVWAMGVTLYCF 233
Query: 647 ITGK 650
+ G+
Sbjct: 234 VFGQ 237
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 4e-06
Identities = 48/226 (21%), Positives = 81/226 (35%), Gaps = 74/226 (32%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQH-------VELLSKLRHRHL 509
L+G+G G ++ G LTD +V++K + + R L S + V LL K+
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIP-RNRVLGWSPLSDSVTCPLEVALLWKVGAGG- 95
Query: 510 VSILGHCILTYQDHPN---------TGSTVFLVLEHISNGS-LRDYLTDWKKKDMLKWPQ 559
HP T LVLE L DY+T +K + +
Sbjct: 96 ------------GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT--EKGPL---GE 138
Query: 560 RMA------IIIGATRGVQFLHTGVAPGIFGNNLKTENILLD-KALTAKLSGYNIPLPSK 612
+ ++ +Q H+ G+ ++K ENIL+D + AKL +
Sbjct: 139 GPSRCFFGQVV----AAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDF------- 184
Query: 613 KGLESPLRGQ---------------YVSNQPGDGAKEDVYQLGVIL 643
G + L + ++S V+ LG++L
Sbjct: 185 -GSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILL 229
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 5e-06
Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 45/213 (21%)
Query: 149 SLEVLNISSNFIYGEIPME--ITSLKNLKSIVLADNLLN-------GSVPDLQRLVLLEE 199
++ L+I + + + L+ + + L D L S L+ L E
Sbjct: 4 DIQSLDIQCEEL-SDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSA--LRVNPALAE 60
Query: 200 LNLGGNDFGPK--------FPSLSKNIVSVILRNNSLRSE----IPSGLKNFDQLKQFDI 247
LNL N+ G + S I + L+N L + S L+ L++ +
Sbjct: 61 LNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHL 120
Query: 248 SSNNFVGP-----IQSFLFSLPSILYLNLAGNQ--------LSEALPVNISCSAKLNFVE 294
S N + L + L L L+ L +
Sbjct: 121 SDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPD----FKELT 176
Query: 295 ISHNLLIGK----LPSCIGSNSLNRTVVSTWNC 323
+S+N + L + + + +C
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESC 209
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 39/195 (20%), Positives = 72/195 (36%), Gaps = 37/195 (18%)
Query: 119 ILTKLSNLKVLSLVSLGL----WGPLPSKINRFWSLEVLNISSNFIYGEIPMEI--TSLK 172
+L L +V+ L GL + S + +L LN+ SN + G++ + L+
Sbjct: 23 LLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNEL-GDVGVHCVLQGLQ 81
Query: 173 N----LKSIVLADNLLN-------GSVPDLQRLVLLEELNLGGNDFGPK-FPSLSK---- 216
++ + L + L S L+ L L+EL+L N G L +
Sbjct: 82 TPSCKIQKLSLQNCCLTGAGCGVLSST--LRTLPTLQELHLSDNLLGDAGLQLLCEGLLD 139
Query: 217 ---NIVSVILRNNSLRSE----IPSGLKNFDQLKQFDISSNNF----VGPIQSFLFSLP- 264
+ + L SL + + S L+ K+ +S+N+ V + L P
Sbjct: 140 PQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPC 199
Query: 265 SILYLNLAGNQLSEA 279
+ L L ++
Sbjct: 200 QLEALKLESCGVTSD 214
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 6e-06
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 50/218 (22%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLR 505
++ ++G+GS G++ K +VK + K + ++++ VELL KL
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLD 79
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--I 563
H +++ + +D + ++V E + G L D + K+K ++ + A I
Sbjct: 80 HPNIMKLFE----ILEDSSS----FYIVGELYTGGELFDEII--KRK---RFSEHDAARI 126
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILL-----DKAL------TAKLSGYNIPLPSK 612
I G+ ++H I +LK ENILL D + + N + +
Sbjct: 127 IKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 613 KGLESP-------LRGQYVSNQPGDGAKEDVYQLGVIL 643
G + LRG Y K DV+ GVIL
Sbjct: 184 IG--TAYYIAPEVLRGTY-------DEKCDVWSAGVIL 212
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 7e-06
Identities = 48/268 (17%), Positives = 91/268 (33%), Gaps = 62/268 (23%)
Query: 416 KPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTD 474
S R + AI + +I E ++ +G G+ G++
Sbjct: 4 HHHHSSGRENLYFQGIAINPGMYVRKKEGKIGE---SYFKVRKLGSGAYGEVLLCKEKNG 60
Query: 475 GSRVSVKCLKLKQ-------------RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521
S ++K +K Q + + + LL L H +++ + ++
Sbjct: 61 HSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD----VFE 116
Query: 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT--RGVQFLHTGVA 579
D +LV E G L + + + K+ + A I G+ +LH
Sbjct: 117 DKKY----FYLVTEFYEGGELFEQII--NRH---KFDECDAANIMKQILSGICYLH---K 164
Query: 580 PGIFGNNLKTENILLD--------KAL---TAKLSGYNIPLPSKKGLESP-------LRG 621
I ++K ENILL+ K + + + L + G + L+
Sbjct: 165 HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLG--TAYYIAPEVLKK 222
Query: 622 QYVSNQPGDGAKEDVYQLGVILLQVITG 649
+Y K DV+ GVI+ ++ G
Sbjct: 223 KY-------NEKCDVWSCGVIMYILLCG 243
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 1e-05
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCLK---LKQRHLPQSLMQHVELLSKLRH 506
+ F ++G G G+++ + ++ + K L LK+R Q M ++L+K+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
R +VS+ ++ T + + LV+ ++ G +R ++ + + + + + AI
Sbjct: 245 RFIVSL--AY--AFE----TKTDLCLVMTIMNGGDIRYHIYNVDEDNP-GFQEPRAIFYT 295
Query: 567 A--TRGVQFLHTGVAPGIFGNNLKTENILLDK 596
A G++ LH I +LK EN+LLD
Sbjct: 296 AQIVSGLEHLH---QRNIIYRDLKPENVLLDD 324
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 1e-05
Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRH 508
+ + +GEG+ +YKG + V++K ++L+ P + ++ V LL L+H +
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V++ H I+ T ++ LV E++ L+ YL D +++ +
Sbjct: 62 IVTL--HDIIH------TEKSLTLVFEYLDK-DLKQYLDD--CGNIINMHNVKLFLFQLL 110
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
RG+ + H + +LK +N+L+++ KL
Sbjct: 111 RGLAYCH---RQKVLHRDLKPQNLLINERGELKL 141
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 1e-05
Identities = 32/155 (20%), Positives = 63/155 (40%), Gaps = 17/155 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHR 507
++ IGEGS G ++K G V++K + + + ++ + +L +L+H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
+LV++L + + LV E+ + ++ L + + +I
Sbjct: 63 NLVNLL--------EVFRRKRRLHLVFEYCDH-TVLHELDR--YQRGVPEHLVKSITWQT 111
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+ V F H ++K ENIL+ K KL
Sbjct: 112 LQAVNFCHKH---NCIHRDVKPENILITKHSVIKL 143
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 21/135 (15%), Positives = 55/135 (40%), Gaps = 16/135 (11%)
Query: 152 VLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQR-LVLLEELNLGGNDFGP- 209
++ +++ I E + T+ + + L + + +L L + ++ N+
Sbjct: 1 MVKLTAELI--EQAAQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL 57
Query: 210 -KFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSF-----LFSL 263
FP L + + ++++ NN + + L + +++N+ + L SL
Sbjct: 58 DGFPLL-RRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNS----LVELGDLDPLASL 112
Query: 264 PSILYLNLAGNQLSE 278
S+ YL + N ++
Sbjct: 113 KSLTYLCILRNPVTN 127
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 15/107 (14%)
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSL-----VSLGLWGPLPSKINRFWSLEVLNISSNFI 160
L I + L + L + L L+ L +++N I
Sbjct: 25 DLRGY-KIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRR-------LKTLLVNNNRI 76
Query: 161 YGEIPMEITSLKNLKSIVLADNLLN--GSVPDLQRLVLLEELNLGGN 205
+L +L ++L +N L G + L L L L + N
Sbjct: 77 CRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN 123
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 3e-05
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHR 507
++ L+GEGS G + K G V++K + + M+ ++LL +LRH
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
+LV++L + +LV E + + ++ D L + L + +
Sbjct: 85 NLVNLL--------EVCKKKKRWYLVFEFVDH-TILDDLELFPNG--LDYQVVQKYLFQI 133
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
G+ F H+ I ++K ENIL+ ++ KL
Sbjct: 134 INGIGFCHSH---NIIHRDIKPENILVSQSGVVKL 165
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 3e-05
Identities = 31/154 (20%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHR 507
+ + +GEG+ G++YK V++K ++L+ +P + ++ V LL +L+HR
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
+++ + ++ + L+ E+ N L+ Y+ M + +
Sbjct: 94 NIIEL--KSVIH------HNHRLHLIFEYAEN-DLKKYMDKNPDVSM---RVIKSFLYQL 141
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601
GV F H+ +LK +N+LL + ++
Sbjct: 142 INGVNFCHS---RRCLHRDLKPQNLLLSVSDASE 172
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 3e-05
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 149 SLEVLNISSNFIYGEIPMEIT--SLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGG 204
+L++S N + + E T L NL S++L+ N LN + + L L+L
Sbjct: 40 YTALLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSS 97
Query: 205 N---DFGPK-FPSLSKNIVSVILRNNSLRSEIPSGLKNFD---QLKQFDISSNNFVG-PI 256
N F L + ++L NN + + F+ QL++ +S N P+
Sbjct: 98 NHLHTLDEFLFSDLQ-ALEVLLLYNNHIVV-VDRNA--FEDMAQLQKLYLSQNQISRFPV 153
Query: 257 QSF--LFSLPSILYLNLAGNQLS 277
+ LP ++ L+L+ N+L
Sbjct: 154 ELIKDGNKLPKLMLLDLSSNKLK 176
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 26/141 (18%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G+ G +++ G K + ++ + ++++L H L+++
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD--- 115
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR----GVQF 573
++D + L+LE +S G L D + + K + I R G++
Sbjct: 116 -AFEDKYE----MVLILEFLSGGELFDRIAA----EDYKMSEAEVINY--MRQACEGLKH 164
Query: 574 LHTGVAPGIFGNNLKTENILL 594
+H I ++K ENI+
Sbjct: 165 MHEH---SIVHLDIKPENIMC 182
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 30/153 (19%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGND 206
S + L++S N + S L+ + L+ + ++ D Q L L L L GN
Sbjct: 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGN- 86
Query: 207 FGPKFPSLSKNI-------VSVILRNNSLRSEIPSGLKNFD---QLKQFDISSNNFVGPI 256
SL+ ++ +L S + + LK+ +++ N I
Sbjct: 87 ---PIQSLALGAFSGLSSLQKLVAVETNLAS-LENFP--IGHLKTLKELNVAHNL----I 136
Query: 257 QSF----LFS-LPSILYLNLAGNQLSEALPVNI 284
QSF FS L ++ +L+L+ N++ ++
Sbjct: 137 QSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTD 168
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 6e-05
Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 20/192 (10%)
Query: 121 TKLSNLKVLSLVSLGLWGPLPSKI-NRFWSLEVLNISSNFIYGEIPMEI-TSLKNLKSIV 178
L+VL L + + L L ++ N I + + + L +L+ +V
Sbjct: 49 FSFPELQVLDLSRCEI-QTIEDGAYQSLSHLSTLILTGNPI-QSLALGAFSGLSSLQKLV 106
Query: 179 LADNLLNGSVPD--LQRLVLLEELNLGGNDF----GPK-FPSLSKNIVSVILRNNSLRSE 231
+ L S+ + + L L+ELN+ N P+ F +L+ N+ + L +N ++S
Sbjct: 107 AVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLT-NLEHLDLSSNKIQS- 163
Query: 232 IPSG-LKNFDQLKQFDIS---SNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287
I L+ Q+ ++S S N + IQ F + L L NQL ++P I
Sbjct: 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLK-SVPDGIFDR 222
Query: 288 -AKLNFVEISHN 298
L + + N
Sbjct: 223 LTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 37/169 (21%), Positives = 56/169 (33%), Gaps = 40/169 (23%)
Query: 118 TILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
+ LS+L+ L V SLE I LK LK +
Sbjct: 94 GAFSGLSSLQKLVAVE-----------TNLASLE-------------NFPIGHLKTLKEL 129
Query: 178 VLADNLLNGSVPD---LQRLVLLEELNLGGN--------DFGPKFPSLSKNIVSVILRNN 226
+A NL+ S L LE L+L N D + +S+ L N
Sbjct: 130 NVAHNLIQ-SFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL-RVLHQMPLLNLSLDLSLN 187
Query: 227 SLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF-SLPSILYLNLAGN 274
+ I G +LK+ + +N + +F L S+ + L N
Sbjct: 188 PMNF-IQPGAFKEIRLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTN 234
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 4e-05
Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 37/184 (20%)
Query: 432 AIGLPPFRGFSLEEIEEATNNFDPTNL---------IGEGSQGQLYKGF-LTDGSRVSVK 481
A+ L + F ++ + P L +G G+ G++ F +V+++
Sbjct: 107 ALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIR 166
Query: 482 CLK--------LKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533
+ ++ ++ +E+L KL H ++ I + ++V
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKN----FFDA-----EDYYIV 217
Query: 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMA--IIIGATRGVQFLHTGVAPGIFGNNLKTEN 591
LE + G L D + K + + VQ+LH GI +LK EN
Sbjct: 218 LELMEGGELFDKVV--GNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPEN 269
Query: 592 ILLD 595
+LL
Sbjct: 270 VLLS 273
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-----RHLPQSLMQHVELLS 502
AT+ ++P IG G+ G +YK G V++K +++ LP S ++ V LL
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 503 KLR---HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
+L H ++V + + + V LV EH+ LR YL D L
Sbjct: 67 RLEAFEHPNVVRL--MDVCA-TSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAET 121
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
++ RG+ FLH I +LK ENIL+ T KL
Sbjct: 122 IKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 4e-05
Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 26/154 (16%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKC-----LKLKQRHLPQSLMQHVELLSKLRH 506
++ +IG+G + + G + +VK + L + + L+H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA---- 562
H+V +L TY +++V E + L + + + + +A
Sbjct: 86 PHIVELLE----TYSSDGM----LYMVFEFMDGADLCFEIVK-RADAGFVYSEAVASHYM 136
Query: 563 -IIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
I+ A +++ H I ++K +LL
Sbjct: 137 RQILEA---LRYCH---DNNIIHRDVKPHCVLLA 164
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 6e-05
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCLK---LKQRHLPQSLMQHVELLSKLRH 506
N F ++G+G G++ + ++ + K L+ +K+R + ++L K+
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
R +VS+ Y+ T + LVL ++ G L+ ++ +P+ A+
Sbjct: 244 RFVVSL--AY--AYE----TKDALCLVLTLMNGGDLKFHI---YHMGQAGFPEARAVFYA 292
Query: 567 A--TRGVQFLHTGVAPGIFGNNLKTENILLD 595
A G++ LH I +LK ENILLD
Sbjct: 293 AEICCGLEDLHRE---RIVYRDLKPENILLD 320
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 6e-05
Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 19/141 (13%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGH 515
++G G G++ + F G + ++K L + Q V+ + H+V IL
Sbjct: 36 VLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-----ARQEVDHHWQASGGPHIVCILD- 89
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--IIIGATRGVQF 573
Y++ + + +++E + G L + ++ + +R A I+ +QF
Sbjct: 90 ---VYENMHHGKRCLLIIMECMEGGELFSRIQ---ERGDQAFTEREAAEIMRDIGTAIQF 143
Query: 574 LHTGVAPGIFGNNLKTENILL 594
LH + I ++K EN+L
Sbjct: 144 LH---SHNIAHRDVKPENLLY 161
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 7e-05
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 20/107 (18%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFLTD------GSRVSVKCLKLK-QRHLPQSLMQHVEL 500
F L +G G+ GQ+ + V+VK LK ++LM +++
Sbjct: 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 78
Query: 501 LSKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
L + H ++V++LG C T P + +++E G+L YL
Sbjct: 79 LIHIGHHLNVVNLLGAC--TKPGGP-----LMVIVEFCKFGNLSTYL 118
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 8e-05
Identities = 31/170 (18%), Positives = 48/170 (28%), Gaps = 46/170 (27%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG 208
LE+ S F G + EI + L+ ++ A L + L + L N FG
Sbjct: 61 DLEIAEFSDIFT-GRVKDEI--PEALRLLLQA----------LLKCPKLHTVRLSDNAFG 107
Query: 209 PK-------FPSLSKNIVSVILRNNSLRSE-------------IPSGLKNFDQLKQFDIS 248
P F S + + L NN L + + KN L+
Sbjct: 108 PTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICG 167
Query: 249 SNNF----VGPIQSFLFSLPSILYLNLAGNQ---------LSEALPVNIS 285
N + S + + + N L E L
Sbjct: 168 RNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQE 217
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 24/140 (17%), Positives = 44/140 (31%), Gaps = 29/140 (20%)
Query: 166 MEITSLKNLKSIVLADNLLNGS-----VPDLQRLVLLEELNLGGNDFGPK-----FPSLS 215
M S++ L + + L ++E+ L GN G + +++
Sbjct: 1 MARFSIEGKS---LKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIA 57
Query: 216 KN--IVSVILRNNS---LRSEIPSG-------LKNFDQLKQFDISSNNF----VGPIQSF 259
+ + ++ EIP L +L +S N F P+ F
Sbjct: 58 SKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDF 117
Query: 260 LFSLPSILYLNLAGNQLSEA 279
L + +L L N L
Sbjct: 118 LSKHTPLEHLYLHNNGLGPQ 137
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 8e-05
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 451 NNFDPTNLIGEGSQGQLYKG--FLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLR- 505
++ IGEG+ G+++K G V++K ++++ +P S ++ V +L L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 506 --HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
H ++V + + T + + + LV EH+ L YL D + + +
Sbjct: 71 FEHPNVVRL--FDVCT-VSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEPGVPTETIKDM 125
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+ RG+ FLH+ + +LK +NIL+ + KL
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 36/164 (21%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK--------LKQRHLPQSLMQH 497
+ + + + +G G+ G++ F +V++K + ++ ++
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 498 VELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------ 551
+E+L KL H ++ I + ++VLE + G L D + K+
Sbjct: 66 IEILKKLNHPCIIKIKN----FFDAE-----DYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
K ++ A VQ+LH GI +LK EN+LL
Sbjct: 117 KLYFY------QMLLA---VQYLH---ENGIIHRDLKPENVLLS 148
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 1e-04
Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 42/205 (20%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
++G G+ +++ G ++KC+K SL + +L K++H ++V++
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED-- 73
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSL------RDYLTDWKKKDMLKWPQRMAIIIGATRG 570
Y+ + +LV++ +S G L R T+ +++ ++ A
Sbjct: 74 --IYEST----THYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ------QVLSA--- 118
Query: 571 VQFLHTGVAPGIFGNNLKTENILL---DKALTAKLSGYNIPLPSKKGLESPLRG-----Q 622
V++LH GI +LK EN+L ++ ++ + + SK +
Sbjct: 119 VKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGL---SKMEQNGIMSTACGTPG 172
Query: 623 YVS----NQPGDGAKEDVYQLGVIL 643
YV+ Q D + +GVI
Sbjct: 173 YVAPEVLAQKPYSKAVDCWSIGVIT 197
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 24/149 (16%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHR 507
+ ++ IG+G+ G+++K G +V++K + ++ P + ++ +++L L+H
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 76
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V+++ C + +++LV + + L L++ + ++
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSN--VLVKFTLSEIKRVMQML 133
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDK 596
G+ ++H I ++K N+L+ +
Sbjct: 134 LNGLYYIHRN---KILHRDMKAANVLITR 159
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 40/189 (21%)
Query: 149 SLEVLNISSNFIYGEIPMEITSL-----KNLKSIVLADNLL-NGSVPDLQRLVL-----L 197
S+ LN+S N + + E+ + N+ S+ L+ N L S +L + + +
Sbjct: 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTI 111
Query: 198 EELNLGGNDFGPK--------FPSLSKNIVSVILRNNSLRSE----IPSGLKNFD-QLKQ 244
L+LG NDF K F +L +I S+ LR N L + + L +
Sbjct: 112 TVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNS 171
Query: 245 FDISSNNF----VGPIQSFLFSLP-SILYLNLAGNQ--------LSEALPVNISCSAKLN 291
++ NN + FL S+P S+ L+L+ N L+ S +
Sbjct: 172 LNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS---SIPNHVV 228
Query: 292 FVEISHNLL 300
+ + N L
Sbjct: 229 SLNLCLNCL 237
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 33/164 (20%), Positives = 68/164 (41%), Gaps = 37/164 (22%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ------RHLPQSLMQHVEL 500
E+ + +IG GS G +++ L + V++K K+ Q R L +M+
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIK--KVLQDKRFKNREL--QIMRI--- 88
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK--KDMLKWP 558
++H ++V + + D + + LVLE++ + + K
Sbjct: 89 ---VKHPNVVDLK-AFFYSNGDKKDE-VFLNLVLEYVP--------ETVYRASRHYAKLK 135
Query: 559 QRMAIIIGAT------RGVQFLHTGVAPGIFGNNLKTENILLDK 596
Q M +++ R + ++H+ GI ++K +N+LLD
Sbjct: 136 QTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDP 176
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 28/147 (19%), Positives = 64/147 (43%), Gaps = 21/147 (14%)
Query: 459 IGEGSQGQLYKG---FLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
+G G+ G +YK D ++K +++ + S + + LL +L+H +++S+
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALK--QIEGTGISMSACREIALLRELKHPNVISLQK- 85
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM------AIIIGATR 569
L++ D V+L+ ++ + L + + K P ++ +++
Sbjct: 86 VFLSHADR-----KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD 139
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDK 596
G+ +LH + +LK NIL+
Sbjct: 140 GIHYLHAN---WVLHRDLKPANILVMG 163
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 3e-04
Identities = 28/194 (14%), Positives = 55/194 (28%), Gaps = 46/194 (23%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQS--------------L 494
T IGEG G++++ D + V++K + ++ L +
Sbjct: 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76
Query: 495 MQHVELLSKL---RHRHLVSILGHCI----------------------LTYQDHPNTGST 529
+ + LLS R + + +
Sbjct: 77 SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136
Query: 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKT 589
+F+VLE G + + + +I+ T + + +L
Sbjct: 137 LFIVLEFEFGGI----DLEQMRTKLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHW 190
Query: 590 ENILLDKALTAKLS 603
N+LL K KL
Sbjct: 191 GNVLLKKTSLKKLH 204
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 3e-04
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 27/168 (16%)
Query: 434 GLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRH 489
G+ PF+ +E+ +D +G G + K + G + K + + +
Sbjct: 1 GMEPFKQQKVED------FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR 54
Query: 490 LP---QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+ + + V +L ++ H +++++ Y++ + V L+LE +S G L D+L
Sbjct: 55 RGVSREEIEREVSILRQVLHHNVITLHD----VYENR----TDVVLILELVSGGELFDFL 106
Query: 547 TDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + I GV +LHT I +LK ENI+L
Sbjct: 107 AQ---KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIML 148
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 3e-04
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 209 PKFPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSI 266
P N+ + + N + L+ +L+ I + + F P +
Sbjct: 25 HHLPGAE-NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRL 82
Query: 267 LYLNLAGNQLSEALPVNISCSAKLNFVEISHN 298
LNL+ N L +L L + +S N
Sbjct: 83 SRLNLSFNALE-SLSWKTVQGLSLQELVLSGN 113
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 3e-04
Identities = 45/276 (16%), Positives = 80/276 (28%), Gaps = 77/276 (27%)
Query: 429 RSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ 487
S+ F+G SL E+++ + IG+GS G + + ++K + +
Sbjct: 7 HSSGRENLYFQGGSLLELQK---KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNK 63
Query: 488 RHLP-----QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSL 542
+ + V L+ KL H ++ + Y+D + LV+E G L
Sbjct: 64 IRQINPKDVERIKTEVRLMKKLHHPNIARLYE----VYEDE----QYICLVMELCHGGHL 115
Query: 543 RDYLTDWKKKDMLKWPQRMAIIIGATR--------------------------------- 569
D L + K +
Sbjct: 116 LDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175
Query: 570 ----GVQFLHTGVAPGIFGNNLKTENILLDKALTAK-------LSGYNIPLPSKKGLESP 618
+ +LH GI ++K EN L + + LS G
Sbjct: 176 QIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLS--KEFYKLNNGEYYG 230
Query: 619 LRG-----QYVS------NQPGDGAKEDVYQLGVIL 643
+ +V+ G K D + GV+L
Sbjct: 231 MTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 31/152 (20%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH-----LPQSLMQHVELLSKL 504
++ + +GEG +YK V++K +KL R + ++ ++ ++LL +L
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H +++ + S + LV + + L + D +L A +
Sbjct: 70 SHPNIIGL--LDAFG------HKSNISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYM 118
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596
+ +G+++LH I +LK N+LLD+
Sbjct: 119 LMTLQGLEYLH---QHWILHRDLKPNNLLLDE 147
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 5e-04
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLR 505
++N+D +G+G+ + + T G + K + KL R Q L + + KL+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQ 63
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--I 563
H ++V + + Q+ +LV + ++ G L + + ++ + + A
Sbjct: 64 HPNIVRLHD----SIQEESF----HYLVFDLVTGGELFEDIV--ARE---FYSEADASHC 110
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
I + + H+ GI NLK EN+LL
Sbjct: 111 IQQILESIAYCHSN---GIVHRNLKPENLLLA 139
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 21/155 (13%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLP---QSLMQHVE 499
++ + +D +G G + K + G + K + + + + + + V
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
+L ++ H +++++ Y++ + V L+LE +S G L D+L K+ L +
Sbjct: 68 ILRQVLHPNIITLHD----VYEN----RTDVVLILELVSGGELFDFLAQ---KESLSEEE 116
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
+ I GV +LHT I +LK ENI+L
Sbjct: 117 ATSFIKQILDGVNYLHTK---KIAHFDLKPENIML 148
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 44/196 (22%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHC 516
+G G G++ + F + ++K L+ + + VEL + + H+V I+
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK-----ARREVELHWRASQCPHIVRIVD-- 78
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--IIIGATRGVQFL 574
Y++ + +V+E + G L + + + +R A I+ +Q+L
Sbjct: 79 --VYENLYAGRKCLLIVMECLDGGELFSRIQ---DRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 575 HTGVAPGIFGNNLKTENILL-DKALTAKLSGYNIPLPSKK----GLESP--LRGQYVSNQ 627
H + I ++K EN+L K A L K G + +Y
Sbjct: 134 H---SINIAHRDVKPENLLYTSKRPNAIL----------KLTDFGF-AKETTGEKY---- 175
Query: 628 PGDGAKEDVYQLGVIL 643
D++ LGVI+
Sbjct: 176 ---DKSCDMWSLGVIM 188
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 6e-04
Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 14/135 (10%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN- 205
++ + + N I P + K L+ I L++N ++ + Q L L L L GN
Sbjct: 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYGNK 91
Query: 206 --DFGPK-FPSLSKNIVSVILRNNSLRSEIPSGLKNFD---QLKQFDISSNNFVGPIQSF 259
+ F L + ++L N + + F L + N +
Sbjct: 92 ITELPKSLFEGLFS-LQLLLLNANKINC-LRVDA--FQDLHNLNLLSLYDNKLQTIAKGT 147
Query: 260 LFSLPSILYLNLAGN 274
L +I ++LA N
Sbjct: 148 FSPLRAIQTMHLAQN 162
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 740 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-35 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-33 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-33 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 3e-33 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 4e-33 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-32 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-32 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-31 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-31 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 5e-31 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 7e-31 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-30 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-30 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 3e-30 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 5e-30 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-29 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-29 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 5e-29 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 6e-29 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 9e-29 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-28 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 4e-28 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 1e-27 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 9e-27 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 9e-27 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 9e-27 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 2e-26 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-26 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 4e-26 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 5e-26 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 6e-26 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 9e-26 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-25 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 4e-25 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-24 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-24 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 6e-24 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 8e-24 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-23 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 5e-23 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 6e-23 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 7e-23 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 8e-23 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-22 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-22 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-22 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-22 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-21 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-21 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 5e-21 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 7e-21 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 5e-20 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-19 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 5e-19 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 5e-19 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 1e-18 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-17 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 3e-17 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 7e-17 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 3e-16 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-14 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 3e-14 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 4e-09 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 7e-12 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-04 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-09 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-09 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 3e-06 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-05 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-04 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 0.001 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 4e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-06 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.002 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 7e-04 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.001 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (337), Expect = 1e-35
Identities = 59/296 (19%), Positives = 114/296 (38%), Gaps = 45/296 (15%)
Query: 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELL 501
++ E IG GS G +YKG V+VK L + Q+ V +L
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 502 SKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
K RH +++ +G+ T + +V + SL +L + K + + +
Sbjct: 59 RKTRHVNILLFMGYS---------TAPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLI 107
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRG 621
I +G+ +LH I +LK+ NI L + LT K+ + + + S
Sbjct: 108 DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 622 QYV-------------SNQPGDGAKEDVYQLGVILLQVITGKQ-VKSTSEVDGLKLQLET 667
Q ++ + DVY G++L +++TG+ + + D + +
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
Query: 668 C-LAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
L+ SK+R+ +++ + CL K +RP +L +++
Sbjct: 225 GYLSPDLSKVRSNCPKAMK------------RLMAECLKKKRDERPLFPQILASIE 268
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (322), Expect = 1e-33
Identities = 55/299 (18%), Positives = 118/299 (39%), Gaps = 43/299 (14%)
Query: 436 PPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM 495
P +G + + E + +G+G G+++ G +RV++K LK P++ +
Sbjct: 2 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFL 60
Query: 496 QHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDML 555
Q +++ KLRH LV + + +++V E++S GSL D+L K +
Sbjct: 61 QEAQVMKKLRHEKLVQLYAVV---------SEEPIYIVTEYMSKGSLLDFLKGETGKYL- 110
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI-------P 608
+ PQ + + G+ ++ +L+ NIL+ + L K++ + +
Sbjct: 111 RLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 167
Query: 609 LPSKKGLESPLRG---QYVSNQPGDGAKEDVYQLGVILLQVITGKQV--KSTSEVDGLKL 663
+++G + P++ + K DV+ G++L ++ T +V + L
Sbjct: 168 YTARQGAKFPIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 226
Query: 664 QLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
P + ++ C K+ +RP+ E + L+
Sbjct: 227 VERGYRMPCPPECPESL----------------HDLMCQCWRKEPEERPTFEYLQAFLE 269
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (320), Expect = 2e-33
Identities = 45/284 (15%), Positives = 103/284 (36%), Gaps = 43/284 (15%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ T ++++ E++ NGSL D+L L + + + G
Sbjct: 72 RLYAVV---------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEG 121
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP----------LPSKKGLESPLR 620
+ F+ +L+ NIL+ L+ K++ + + K
Sbjct: 122 MAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 178
Query: 621 GQYVSNQPGDGAKEDVYQLGVILLQVITGKQV--KSTSEVDGLKLQLETCLAEAPSKLRA 678
+ ++ K DV+ G++L +++T ++ + + ++ P
Sbjct: 179 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 237
Query: 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
E ++ C + RP+ + + L+
Sbjct: 238 EL----------------YQLMRLCWKERPEDRPTFDYLRSVLE 265
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (318), Expect = 3e-33
Identities = 57/287 (19%), Positives = 109/287 (37%), Gaps = 40/287 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
IG+G G + G G++V+VKC+K Q+ + ++++LRH +LV
Sbjct: 7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 63
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+LG + +++V E+++ GSL DYL + + +L + +
Sbjct: 64 QLLGVIV-------EEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEA 115
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAK--LSGYNIPLPSKKGLESPLRG----QYV 624
+++L +L N+L+ + AK G S + + +
Sbjct: 116 MEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEAL 172
Query: 625 SNQPGDGAKEDVYQLGVILLQVITGKQV--KSTSEVDGLKLQLETCLAEAPSKLRAEADP 682
+ K DV+ G++L ++ + +V D + + +AP
Sbjct: 173 REKKFS-TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAV-- 229
Query: 683 SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQE 729
E+ NC DAA RPS + L++ I+ E
Sbjct: 230 --------------YEVMKNCWHLDAAMRPSFLQLREQLEH-IKTHE 261
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (320), Expect = 4e-33
Identities = 53/303 (17%), Positives = 112/303 (36%), Gaps = 44/303 (14%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVEL--LSKLRHRHLVSILGHC 516
IG+G G++++G G V+VK ++ +S + E+ LRH +++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
T + ++LV ++ +GSL DYL + + + + + G+ LH
Sbjct: 67 ----NKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHM 118
Query: 577 GVA-----PGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESP------------- 618
+ P I +LK++NIL+ K T ++ + + ++
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 619 -----LRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673
L + D+Y +G++ ++ + E L +
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238
Query: 674 SKLRAEA-----DPSVRGTYAY-DSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQV 727
++R P++ + ++LR +I C + A R + + L +
Sbjct: 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS-QLSQ 297
Query: 728 QEG 730
QEG
Sbjct: 298 QEG 300
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (311), Expect = 2e-32
Identities = 43/284 (15%), Positives = 105/284 (36%), Gaps = 43/284 (15%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
+ +G G G + G V++K +K + ++ +++ L H LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLV 62
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ G C +F++ E+++NG L +YL + + + Q + +
Sbjct: 63 QLYGVCT--------KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEA 112
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI-------PLPSKKGLESPLRG-- 621
+++L + +L N L++ K+S + + S G + P+R
Sbjct: 113 MEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 169
Query: 622 -QYVSNQPGDGAKEDVYQLGVILLQVITGKQV--KSTSEVDGLKLQLETCLAEAPSKLRA 678
+ + +K D++ GV++ ++ + ++ + + + + + P
Sbjct: 170 PEVLMYSKFS-SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE 228
Query: 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
+ I +C + A +RP+ + +L N+
Sbjct: 229 KV----------------YTIMYSCWHEKADERPTFKILLSNIL 256
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (310), Expect = 3e-32
Identities = 46/282 (16%), Positives = 103/282 (36%), Gaps = 39/282 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
+ IG G G ++ G+ + +V++K ++ + + ++ E++ KL H LV
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ G C+ + + LV E + +G L DY ++ + + + + G
Sbjct: 64 QLYGVCL--------EQAPICLVFEFMEHGCLSDY--LRTQRGLFAAETLLGMCLDVCEG 113
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRG--------- 621
+ + +L N L+ + K+S + + + G
Sbjct: 114 ---MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 170
Query: 622 -QYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680
+ S +K DV+ GV++ +V + ++ + + + + E S
Sbjct: 171 PEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSN-------SEVVEDISTGFRLY 222
Query: 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
P + T+ Y + +C + RP+ +L L
Sbjct: 223 KPRLASTHVYQIMN-------HCWKERPEDRPAFSRLLRQLA 257
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (310), Expect = 1e-31
Identities = 49/309 (15%), Positives = 112/309 (36%), Gaps = 49/309 (15%)
Query: 446 IEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH-LPQSLMQHVELLSK 503
+E ++F+ + +G G+ G ++K G ++ K + L+ + + +++ +++L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
++V G + + + +EH+ GSL L KK + +
Sbjct: 61 CNSPYIVGFYGAFY--------SDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKV 109
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQY 623
I +G+ +L I ++K NIL++ KL + + + + G
Sbjct: 110 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
Query: 624 ------VSNQPGDGAKEDVYQLGVILLQVITGK---QVKSTSEVDGLKL-QLETCLAEAP 673
+ D++ +G+ L+++ G+ E++ + Q+E AE P
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 674 SKLRAEADPSVRGTYAYDSLRTTVEITIN------------------------CLSKDAA 709
+ R P E+ CL K+ A
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 710 KRPSIEDVL 718
+R ++ ++
Sbjct: 288 ERADLKQLM 296
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 4e-31
Identities = 55/285 (19%), Positives = 103/285 (36%), Gaps = 43/285 (15%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRH 508
+++ IG GS G+ K +DG + K L Q L+ V LL +L+H +
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD-WKKKDMLKWPQRMAIIIGA 567
+V I T +T+++V+E+ G L +T K++ L + ++
Sbjct: 65 IVRYYDRII------DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 118
Query: 568 TRGVQFLH--TGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQYVS 625
T ++ H + + +LK N+ LD KL + + ++ +
Sbjct: 119 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL---ARILNHDTSFAKAFV 175
Query: 626 NQPGDGAKE-----------DVYQLGVILLQVITGKQV-KSTSEVDGLKLQLETCLAEAP 673
P + E D++ LG +L ++ + S+ + E P
Sbjct: 176 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP 235
Query: 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ E EI L+ RPS+E++L
Sbjct: 236 YRYSDEL----------------NEIITRMLNLKDYHRPSVEEIL 264
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 121 bits (304), Expect = 5e-31
Identities = 50/313 (15%), Positives = 103/313 (32%), Gaps = 54/313 (17%)
Query: 441 FSLEEIEEATNNFDPT---------NLIGEGSQGQLYKGFL--TDGSRVSVKCLKLKQRH 489
F+ E+ EA F +IG G G++ G L + V LK +
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 490 LPQ---SLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+ + ++ + H +++ + G + V ++ E + NGSL +
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVT--------KSTPVMIITEFMENGSLDSF- 117
Query: 547 TDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--- 603
+ Q + ++ G G+++L +L NIL++ L K+S
Sbjct: 118 -LRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFG 173
Query: 604 --------GYNIPLPSKKGLESPLR--GQYVSNQPGDGAKEDVYQLGVILLQVITGKQVK 653
+ S G + P+R + DV+ G+++ +V++ +
Sbjct: 174 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER- 232
Query: 654 STSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS 713
+ + R D ++ ++C KD RP
Sbjct: 233 -------------PYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPK 279
Query: 714 IEDVLWNLQYSIQ 726
++ L I+
Sbjct: 280 FGQIVNTLDKMIR 292
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 7e-31
Identities = 47/295 (15%), Positives = 97/295 (32%), Gaps = 52/295 (17%)
Query: 447 EEATNNFDPT------NLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVE 499
E T + +P +G+G+ G++YK + + K + K + M ++
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID 61
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
+L+ H ++V +L + +++++E + G++ + + + L Q
Sbjct: 62 ILASCDHPNIVKLLDAFY--------YENNLWILIEFCAGGAVDAVM--LELERPLTESQ 111
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLES 617
+ + +LH I +LK NIL KL+ G +
Sbjct: 112 IQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD 168
Query: 618 PLRGQ-----------YVSNQPGDGAKEDVYQLGVILLQVITGK---QVKSTSEVDGLKL 663
G S K DV+ LG+ L+++ + + V
Sbjct: 169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA 228
Query: 664 QLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ E PS+ + + CL K+ R + +L
Sbjct: 229 KSEPPTLAQPSRWSSNF----------------KDFLKKCLEKNVDARWTTSQLL 267
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (299), Expect = 1e-30
Identities = 52/290 (17%), Positives = 108/290 (37%), Gaps = 47/290 (16%)
Query: 439 RGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLK---LKQRHLPQSL 494
R ++LE +F+ +G+G G +Y +++K L L++ + L
Sbjct: 1 RQWALE-------DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 53
Query: 495 MQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
+ VE+ S LRH +++ + G+ + V+L+LE+ G++ L K
Sbjct: 54 RREVEIQSHLRHPNILRLYGYFH--------DATRVYLILEYAPLGTVYRELQKLSK--- 102
Query: 555 LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKG 614
+ I + + H+ + ++K EN+LL A K++ + + +
Sbjct: 103 FDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 159
Query: 615 LESPLRGQYVSNQP------GDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETC 668
+ L G P K D++ LGV+ + + GK + ++
Sbjct: 160 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 219
Query: 669 LAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
P + A ++ L + ++RP + +VL
Sbjct: 220 EFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREVL 253
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (299), Expect = 1e-30
Identities = 51/281 (18%), Positives = 107/281 (38%), Gaps = 40/281 (14%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRH 508
++D +GEG+ G++ V+VK + +K+ P+++ + + + L H +
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V GH G+ +L LE+ S G L D + + + P
Sbjct: 65 VVKFYGHRR--------EGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLM 113
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN----IPLPSKKGLESPLRG--- 621
GV +LH GI ++K EN+LLD+ K+S + +++ L + + G
Sbjct: 114 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170
Query: 622 ----QYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677
+ + + DV+ G++L ++ G+ D + + +
Sbjct: 171 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS-DSCQEYSDWKEKKTYLNPW 229
Query: 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ D + + L ++ + R +I D+
Sbjct: 230 KKIDSAPL------------ALLHKILVENPSARITIPDIK 258
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 119 bits (298), Expect = 3e-30
Identities = 45/295 (15%), Positives = 102/295 (34%), Gaps = 37/295 (12%)
Query: 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSR-VSVKCLKLKQRHLPQSLMQHVEL 500
+ ++ E + + +G G G++Y+G S V+VK LK + + ++ +
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 66
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR 560
+ +++H +LV +LG C +++ E ++ G+L DYL + +
Sbjct: 67 MKEIKHPNLVQLLGVCT--------REPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVL 117
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY---NIPLPSKKGLES 617
+ + + +++L +L N L+ + K++ + + +
Sbjct: 118 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 174
Query: 618 PLRGQYVSNQPGD------GAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE 671
+ P K DV+ GV+L ++ T
Sbjct: 175 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP--------------GI 220
Query: 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726
S++ + R E+ C + + RPS ++ + Q
Sbjct: 221 DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 117 bits (295), Expect = 5e-30
Identities = 53/291 (18%), Positives = 105/291 (36%), Gaps = 50/291 (17%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---------RHLPQSLMQHVELL 501
N++P ++G G + + +VK + + + L ++ ++ V++L
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 502 SKLR-HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR 560
K+ H +++ + T + FLV + + G L DYL +K L +
Sbjct: 64 RKVSGHPNIIQLKDTYE--------TNTFFFLVFDLMKKGELFDYL---TEKVTLSEKET 112
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLES--- 617
I+ + LH I +LK ENILLD + KL+ + G +
Sbjct: 113 RKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV 169
Query: 618 ----------PLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLET 667
+ N PG G + D++ GVI+ ++ G + + + +
Sbjct: 170 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 229
Query: 668 CLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ S + +V+ ++ L KR + E+ L
Sbjct: 230 GNYQFGSPEWDDYSDTVK------------DLVSRFLVVQPQKRYTAEEAL 268
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 117 bits (295), Expect = 1e-29
Identities = 57/289 (19%), Positives = 105/289 (36%), Gaps = 42/289 (14%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP---QSLMQ 496
F ++ E+ F IG GS G +Y + + V++K + + Q +++
Sbjct: 8 FFKDDPEK---LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 64
Query: 497 HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLK 556
V L KLRH + + G + T +LV+E+ + K L+
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYL--------REHTAWLVMEYCLGSASDLLE---VHKKPLQ 113
Query: 557 WPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI-----PLPS 611
+ A+ GA +G+ +LH + + ++K NILL + KL + P S
Sbjct: 114 EVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 170
Query: 612 KKGLESPLRGQYVSNQPGD--GAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCL 669
G + + + K DV+ LG+ +++ K ++ +
Sbjct: 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP--PLFNMNAMSALYHIAQ 228
Query: 670 AEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
E+P+ R +CL K RP+ E +L
Sbjct: 229 NESPALQSGHWSEYFR------------NFVDSCLQKIPQDRPTSEVLL 265
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (294), Expect = 1e-29
Identities = 59/294 (20%), Positives = 126/294 (42%), Gaps = 49/294 (16%)
Query: 443 LEEIEEATNNFDPT------NLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLM 495
LE++ + DP IG+G+ G +Y + G V+++ + L+Q+ + ++
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII 65
Query: 496 QHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDML 555
+ ++ + ++ ++V+ L + G +++V+E+++ GSL D +T+
Sbjct: 66 NEILVMRENKNPNIVNYLDSYL--------VGDELWVVMEYLAGGSLTDVVTETCM---- 113
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKK 613
Q A+ + ++FLH + + ++K++NILL + KL+ G+ + ++
Sbjct: 114 DEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 614 GLESPLRGQYVSNQPGD------GAKEDVYQLGVILLQVITGK---QVKSTSEVDGLKLQ 664
S + G P G K D++ LG++ +++I G+ ++ L
Sbjct: 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT 230
Query: 665 LETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
T + P KL A + CL D KR S +++L
Sbjct: 231 NGTPELQNPEKLSAIF----------------RDFLNRCLDMDVEKRGSAKELL 268
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (289), Expect = 5e-29
Identities = 49/298 (16%), Positives = 102/298 (34%), Gaps = 51/298 (17%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSR----VSVKCL-KLKQRHLPQSLMQHVE 499
+F+ +IG G G +Y G L D +VK L ++ +
Sbjct: 23 GPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI 80
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
++ H +++S+LG C+ + + +VL ++ +G LR++ +
Sbjct: 81 IMKDFSHPNVLSLLGICL-------RSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKD 131
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP----------- 608
+ + +G++FL + +L N +LD+ T K++ + +
Sbjct: 132 LIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 188
Query: 609 --LPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQV--KSTSEVDGLKLQ 664
K + + + Q K DV+ GV+L +++T + D
Sbjct: 189 HNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 247
Query: 665 LETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
L+ P E+ + C A RPS +++ +
Sbjct: 248 LQGRRLLQPEYCPDPL----------------YEVMLKCWHPKAEMRPSFSELVSRIS 289
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 116 bits (292), Expect = 6e-29
Identities = 37/279 (13%), Positives = 93/279 (33%), Gaps = 37/279 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
+++D +G G+ G +++ G+ + K + +++ + ++ +S LRH L
Sbjct: 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
V++ + + ++ E +S G L + + + + + + + + +
Sbjct: 86 VNLHDAFE--------DDNEMVMIYEFMSGGELFEKV--ADEHNKMSEDEAVEYMRQVCK 135
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALT----------AKLSGYNIPLPSKKGLESPL 619
G+ +H +LK ENI+ + + G
Sbjct: 136 GLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA 192
Query: 620 RGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679
+ +P G D++ +GV+ +++G D +++C +
Sbjct: 193 APEVAEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG 251
Query: 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ + L D R +I L
Sbjct: 252 ISEDGK------------DFIRKLLLADPNTRMTIHQAL 278
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (286), Expect = 9e-29
Identities = 50/302 (16%), Positives = 108/302 (35%), Gaps = 46/302 (15%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSR-----VSVKCLKLKQRH-LPQSLMQHV 498
EI + +IG G G++YKG L S V++K LK +
Sbjct: 3 EIH--PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 60
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
++ + H +++ + G + + ++ E++ NG+L + +K
Sbjct: 61 GIMGQFSHHNIIRLEGVI--------SKYKPMMIITEYMENGALDKF--LREKDGEFSVL 110
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESP 618
Q + ++ G G+++L +L NIL++ L K+S + + + E+
Sbjct: 111 QLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 167
Query: 619 LRGQYVSNQPGDGAKE-----------DVYQLGVILLQVITGKQVKSTSEVDGLKLQLET 667
A E DV+ G+++ +V+T +
Sbjct: 168 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER--------------P 213
Query: 668 CLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQV 727
+ ++ + R D ++ + C ++ A+RP D++ L I+
Sbjct: 214 YWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273
Query: 728 QE 729
+
Sbjct: 274 PD 275
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (281), Expect = 3e-28
Identities = 59/269 (21%), Positives = 113/269 (42%), Gaps = 30/269 (11%)
Query: 459 IGEGSQGQLYKGFLTD-GSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGH 515
IG GS +YKG T+ V+ L+ ++ + Q + E+L L+H ++V
Sbjct: 17 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDS 76
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
+ + LV E +++G+L+ YL K+ ++K + +G+QFLH
Sbjct: 77 W----ESTVKGKKCIVLVTELMTSGTLKTYL---KRFKVMKIKVLRSWCRQILKGLQFLH 129
Query: 576 TGVAPGIFGNNLKTENILL-DKALTAKLSGYNIPLPSKKGLESPLRG--QYVS---NQPG 629
T P I +LK +NI + + K+ + + + G ++++ +
Sbjct: 130 TR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK 188
Query: 630 DGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYA 689
DVY G+ +L++ T + S + + T + P+ A P V+
Sbjct: 189 YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK-PASFDKVAIPEVK---- 243
Query: 690 YDSLRTTVEITINCLSKDAAKRPSIEDVL 718
EI C+ ++ +R SI+D+L
Sbjct: 244 --------EIIEGCIRQNKDERYSIKDLL 264
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 113 bits (282), Expect = 4e-28
Identities = 51/321 (15%), Positives = 104/321 (32%), Gaps = 67/321 (20%)
Query: 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLK-QRHLPQSL 494
L +E NN + IGEG+ G++++ + V+VK LK + +
Sbjct: 4 KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63
Query: 495 MQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
+ L+++ + ++V +LG C G + L+ E+++ G L ++L +
Sbjct: 64 QREAALMAEFDNPNIVKLLGVCA--------VGKPMCLLFEYMAYGDLNEFLRSMSPHTV 115
Query: 555 ---------------------LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
L +++ I G+ +L +L T N L
Sbjct: 116 CSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCL 172
Query: 594 LDKALTAKLSGYNIPLPSKKGLESPLRGQYVS----------NQPGDGAKEDVYQLGVIL 643
+ + + K++ + + G + DV+ GV+L
Sbjct: 173 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 232
Query: 644 LQVITGKQV--KSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITI 701
++ + + + + + + P E +
Sbjct: 233 WEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLEL----------------YNLMR 276
Query: 702 NCLSKDAAKRPSIEDVLWNLQ 722
C SK A RPS + LQ
Sbjct: 277 LCWSKLPADRPSFCSIHRILQ 297
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (277), Expect = 1e-27
Identities = 45/297 (15%), Positives = 108/297 (36%), Gaps = 48/297 (16%)
Query: 444 EEIEEATNNFDPTNL-IGEGSQGQLYKGFLTDGSR---VSVKCLKLK-QRHLPQSLMQHV 498
+++ +N ++ +G G+ G + +G + V++K LK ++ + +M+
Sbjct: 1 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 60
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
+++ +L + ++V ++G C + LV+E G L +L +++ +
Sbjct: 61 QIMHQLDNPYIVRLIGVC---------QAEALMLVMEMAGGGPLHKFLVGKREE--IPVS 109
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---------DKALTAKLSGYNIPL 609
++ + G+++L +L N+LL D L+ L +
Sbjct: 110 NVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY 166
Query: 610 PSKKGLESPLRGQ--YVSNQPGDGAKEDVYQLGVILLQVITGKQV--KSTSEVDGLKLQL 665
++ + PL+ N ++ DV+ GV + + ++ Q K + +
Sbjct: 167 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 226
Query: 666 ETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
+ E P + E + +C RP V ++
Sbjct: 227 QGKRMECPPECPPEL----------------YALMSDCWIYKWEDRPDFLTVEQRMR 267
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 108 bits (270), Expect = 9e-27
Identities = 48/297 (16%), Positives = 105/297 (35%), Gaps = 41/297 (13%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK---LKQRHLPQSLMQHVELLSKLR 505
++ ++ ++G G +++ L V+VK L+ + + + + L
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
H +V++ + G ++V+E++ +LRD + + + + +I
Sbjct: 66 HPAIVAVYDTG----EAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIA 118
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQYVS 625
A + + F H GI ++K NI++ K+ + I S + V
Sbjct: 119 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 175
Query: 626 NQPGDGAKE-----------DVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPS 674
+ E DVY LG +L +V+TG+ + + Q PS
Sbjct: 176 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 235
Query: 675 KLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-SIEDVLWNLQYSIQVQEG 730
+ + + L+K+ R + ++ +L ++V G
Sbjct: 236 ARHEGLSADLD------------AVVLKALAKNPENRYQTAAEMRADL---VRVHNG 277
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 110 bits (275), Expect = 9e-27
Identities = 41/278 (14%), Positives = 100/278 (35%), Gaps = 35/278 (12%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
+ +D +G G+ G +++ G K + ++ + ++++L H L
Sbjct: 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
+++ + L+LE +S G L D + + + + + + A
Sbjct: 89 INLHDAFE--------DKYEMVLILEFLSGGELFDRIA--AEDYKMSEAEVINYMRQACE 138
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS----GYNIPLPSKKGLESPLRGQY-- 623
G++ +H I ++K ENI+ + + + G L + ++
Sbjct: 139 GLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA 195
Query: 624 ---VSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680
+ ++ G D++ +GV+ +++G + + ++ C E +
Sbjct: 196 APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 255
Query: 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
P + + N L K+ KR ++ D L
Sbjct: 256 SPEAK------------DFIKNLLQKEPRKRLTVHDAL 281
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (270), Expect = 9e-27
Identities = 43/301 (14%), Positives = 96/301 (31%), Gaps = 48/301 (15%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSR----VSVKCLK-LKQRHLPQSLMQHVE 499
EI+ + IGEG G +++G V++K K + + +Q
Sbjct: 3 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
+ + H H+V ++G T + V++++E + G LR + +K L
Sbjct: 61 TMRQFDHPHIVKLIGVI---------TENPVWIIMELCTLGELRSF--LQVRKYSLDLAS 109
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI---PLPSKKGLE 616
+ + + +L + ++ N+L+ KL + + S
Sbjct: 110 LILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 166
Query: 617 SPLRG------QYVSNQPGDGAKEDVYQLGVILLQVITGKQ--VKSTSEVDGLKLQLETC 668
S + N + DV+ GV + +++ + D +
Sbjct: 167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 226
Query: 669 LAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQ 728
P + C + D ++RP ++ L ++ +
Sbjct: 227 RLPMPPNCPPTL----------------YSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 270
Query: 729 E 729
+
Sbjct: 271 K 271
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (270), Expect = 2e-26
Identities = 52/311 (16%), Positives = 113/311 (36%), Gaps = 54/311 (17%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQ---SLMQHVELLSKL-R 505
N+ ++IGEG+ GQ+ K + DG R+ ++K+ +E+L KL
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL-------------TDWKKK 552
H +++++LG C ++L +E+ +G+L D+L
Sbjct: 70 HPNIINLLGACE--------HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 121
Query: 553 DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612
L Q + RG+ +L +L NIL+ + AK++ + + +
Sbjct: 122 STLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQE 178
Query: 613 KGLESPLRG-------QYVSNQPGDGAKEDVYQLGVILLQVITGKQV--KSTSEVDGLKL 663
++ + N DV+ GV+L ++++ + + +
Sbjct: 179 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 238
Query: 664 QLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQY 723
+ E P E ++ C + +RPS +L +L
Sbjct: 239 LPQGYRLEKPLNCDDEV----------------YDLMRQCWREKPYERPSFAQILVSLNR 282
Query: 724 SIQVQEGWTSS 734
++ ++ + ++
Sbjct: 283 MLEERKTYVNT 293
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (269), Expect = 2e-26
Identities = 44/281 (15%), Positives = 93/281 (33%), Gaps = 44/281 (15%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK---LKQRHLPQSLMQHVELLSKLRHR 507
+F ++GEGS + L ++K L+ + + + + + +++S+L H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
V + ++ L + NG L Y+
Sbjct: 69 FFVKLYFTFQ--------DDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEI 117
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQYVS-- 625
+++LH GI +LK ENILL++ + +++ + + +V
Sbjct: 118 VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 174
Query: 626 --------NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677
+ D++ LG I+ Q++ G + ++ + P K
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 234
Query: 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+A ++ L DA KR E++
Sbjct: 235 PKA----------------RDLVEKLLVLDATKRLGCEEME 259
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 108 bits (270), Expect = 4e-26
Identities = 48/281 (17%), Positives = 90/281 (32%), Gaps = 47/281 (16%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLK------QRHLPQSLMQHVELLSK 503
N+F +IG G G++Y D G ++KCL K L + + L+S
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
+V + T + +L+ ++ G L +L + +
Sbjct: 64 GDCPFIVCMSYAFH--------TPDKLSFILDLMNGGDLHYHL---SQHGVFSEADMRFY 112
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRG-- 621
G++ +H + +LK NILLD+ ++S + K G
Sbjct: 113 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH 169
Query: 622 -----QYVSNQPGDGAKEDVYQLGVILLQVITGK---QVKSTSEVDGLKLQLETCLAEAP 673
+ + + D + LG +L +++ G + T + + T E P
Sbjct: 170 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 229
Query: 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSI 714
E + G L +D +R
Sbjct: 230 DSFSPELRSLLEG----------------LLQRDVNRRLGC 254
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (265), Expect = 5e-26
Identities = 47/284 (16%), Positives = 95/284 (33%), Gaps = 49/284 (17%)
Query: 457 NLIGEGSQGQLYKGFLTD---GSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVS 511
+G G+ G + KG+ V+VK LK + L L+ ++ +L + ++V
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
++G C + LV+E G L YL + +K + ++ + G+
Sbjct: 73 MIGIC---------EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGM 120
Query: 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQYVSNQPG-- 629
++L +L N+LL AK+S + + + +
Sbjct: 121 KYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 177
Query: 630 ---------DGAKEDVYQLGVILLQVITGKQV--KSTSEVDGLKLQLETCLAEAPSKLRA 678
+K DV+ GV++ + + Q + + + + P+
Sbjct: 178 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 237
Query: 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
E ++ C + D RP V L+
Sbjct: 238 EM----------------YDLMNLCWTYDVENRPGFAAVELRLR 265
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (266), Expect = 6e-26
Identities = 50/329 (15%), Positives = 112/329 (34%), Gaps = 62/329 (18%)
Query: 425 PQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRV 478
P+ +A + +P +E E A + +G+GS G +Y+G +RV
Sbjct: 1 PEYFSAADVYVP-------DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV 53
Query: 479 SVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHI 537
++K + + ++ + H+V +LG G +++E +
Sbjct: 54 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS--------QGQPTLVIMELM 105
Query: 538 SNGSLRDYLTDWKKK-------DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTE 590
+ G L+ YL + + + + G+ +L+ A +L
Sbjct: 106 TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAAR 162
Query: 591 NILLDKALTAKLS--GYNIPLPSKKGLESPLRG---------QYVSNQPGDGAKEDVYQL 639
N ++ + T K+ G + +G + + + DV+
Sbjct: 163 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT-YSDVWSF 221
Query: 640 GVILLQVITGKQV--KSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTV 697
GV+L ++ T + + S L+ +E L + P
Sbjct: 222 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML----------------F 265
Query: 698 EITINCLSKDAAKRPSIEDVLWNLQYSIQ 726
E+ C + RPS +++ +++ ++
Sbjct: 266 ELMRMCWQYNPKMRPSFLEIISSIKEEME 294
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (265), Expect = 9e-26
Identities = 50/309 (16%), Positives = 97/309 (31%), Gaps = 57/309 (18%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSK 503
N +G G+ G++ + V+VK LK ++LM +++LS
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 504 L-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-------- 554
L H ++V++LG C G ++ E+ G L ++L + +
Sbjct: 83 LGNHMNIVNLLGACT--------IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 134
Query: 555 -------LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
L ++ +G+ FL + +L NILL K+ + +
Sbjct: 135 MEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGL 191
Query: 608 PLPSKKGLESPLRGQYVS----------NQPGDGAKEDVYQLGVILLQVITGKQVKSTSE 657
K ++G + DV+ G+ L ++ +
Sbjct: 192 ARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251
Query: 658 VDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDV 717
SK R + +I C D KRP+ + +
Sbjct: 252 -------------PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298
Query: 718 LWNLQYSIQ 726
+ ++ I
Sbjct: 299 VQLIEKQIS 307
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 105 bits (264), Expect = 1e-25
Identities = 47/285 (16%), Positives = 105/285 (36%), Gaps = 34/285 (11%)
Query: 444 EEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-RHLPQSLMQHVELL 501
++ E+ + +D +++G G+ ++ V++KC+ K S+ + +L
Sbjct: 2 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 61
Query: 502 SKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
K++H ++V++ +G ++L+++ +S G L D + +K
Sbjct: 62 HKIKHPNIVALDDIYE--------SGGHLYLIMQLVSGGELFDRI---VEKGFYTERDAS 110
Query: 562 AIIIGATRGVQFL------HTGVAPGIFGNNLKTEN--ILLDKALTAKLSGYNIPLPSKK 613
+I V++L H + P E+ I++ +K+ L +
Sbjct: 111 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 170
Query: 614 GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673
G + + ++ +P D + +GVI ++ G L Q+ E
Sbjct: 171 GTPGYVAPEVLAQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 229
Query: 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
S + S + + + + KD KR + E L
Sbjct: 230 SPYWDDISDSAK------------DFIRHLMEKDPEKRFTCEQAL 262
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (262), Expect = 4e-25
Identities = 48/290 (16%), Positives = 100/290 (34%), Gaps = 32/290 (11%)
Query: 452 NFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
++ T +IG GS G +Y+ L D G V++K + +R + ++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIV 76
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ + + + LVL+++ R + K L + R
Sbjct: 77 RLRYFFYSSGEKKDEV--YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALT---------AKLSGYNIPLPSKKGLESPLRG 621
+ ++H + GI ++K +N+LLD AK P S
Sbjct: 135 LAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 622 QYVSNQPGDGAKEDVYQLGVILLQVITGKQV-KSTSEVDGLKLQLETCLAEAPSKLRAEA 680
+ + + DV+ G +L +++ G+ + S VD L ++ ++R
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 681 DPSVRGTYAYDSLRTTVEITIN------------CLSKDAAKRPSIEDVL 718
+ ++ L R + +
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (257), Expect = 1e-24
Identities = 38/282 (13%), Positives = 91/282 (32%), Gaps = 36/282 (12%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR 505
+E + +G G G +++ + K +K+K + + + +L+ R
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIAR 59
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
HR+++ + + + ++ E IS + + + L + ++ +
Sbjct: 60 HRNILHLHESFE--------SMEELVMIFEFISGLDIFERIN--TSAFELNEREIVSYVH 109
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLD--KALTAKLSGYNIPLPSKKGLESPLRGQY 623
+QFLH + I +++ ENI+ ++ T K+ + K G L
Sbjct: 110 QVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA 166
Query: 624 -------VSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676
V D++ LG ++ +++G + + +
Sbjct: 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEA 226
Query: 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
E + L K+ R + + L
Sbjct: 227 FKEISIEAM------------DFVDRLLVKERKSRMTASEAL 256
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (254), Expect = 1e-24
Identities = 45/286 (15%), Positives = 88/286 (30%), Gaps = 45/286 (15%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLK---LKQRHLPQSLMQHVELLSK 503
+ +G+GS G + +G V+VKCLK L Q ++ V +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
L HR+L+ + G + +V E GSL D K +
Sbjct: 68 LDHRNLIRLYGVV---------LTPPMKMVTELAPLGSLLDR--LRKHQGHFLLGTLSRY 116
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQ- 622
+ G+ +L + +L N+LL K+ + + + + + +
Sbjct: 117 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 623 ----------YVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672
D + GV L ++ T G + + ++
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY----------GQEPWIGLNGSQI 223
Query: 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
K+ E + R + + + C + RP+ +
Sbjct: 224 LHKIDKEGERLPRPEDCPQDIY---NVMVQCWAHKPEDRPTFVALR 266
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (250), Expect = 6e-24
Identities = 48/289 (16%), Positives = 95/289 (32%), Gaps = 41/289 (14%)
Query: 457 NLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+ +GEG +YK V++K +KL R + ++ ++ ++LL +L H +++
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+L S + LV + + +L A ++ +G
Sbjct: 64 GLLDAFG--------HKSNISLVFDFMETDLEVII---KDNSLVLTPSHIKAYMLMTLQG 112
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLESPLRG------- 621
+++LH I +LK N+LLD+ KL+ G S +
Sbjct: 113 LEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAP 169
Query: 622 QYVSNQPGDGAKEDVYQLGVILLQVITGKQV-KSTSEVDGLKLQLETCLAEAPSKLRAEA 680
+ + G D++ +G IL +++ S++D L ET +
Sbjct: 170 ELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 229
Query: 681 DPSVRGTYAYDSLRTTVEITIN-----------CLSKDAAKRPSIEDVL 718
T+ I + R + L
Sbjct: 230 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 278
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (251), Expect = 8e-24
Identities = 49/310 (15%), Positives = 106/310 (34%), Gaps = 62/310 (20%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSR------VSVKCLKLK-QRHLPQSLMQHVELLSK 503
N + ++G G+ G++ S+ V+VK LK K ++LM ++++++
Sbjct: 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96
Query: 504 L-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK---------- 552
L H ++V++LG C ++L+ E+ G L +YL ++K
Sbjct: 97 LGSHENIVNLLGACT--------LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 148
Query: 553 ----------DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
++L + + +G++FL +L N+L+ K+
Sbjct: 149 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKI 205
Query: 603 SGYNIPLPSKKGLESPLRGQYVS----------NQPGDGAKEDVYQLGVILLQVITGKQV 652
+ + +RG + K DV+ G++L ++ +
Sbjct: 206 CDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 265
Query: 653 KSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP 712
+ + + + I +C + D+ KRP
Sbjct: 266 PYPGI-------------PVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRP 312
Query: 713 SIEDVLWNLQ 722
S ++ L
Sbjct: 313 SFPNLTSFLG 322
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 99 bits (248), Expect = 2e-23
Identities = 44/300 (14%), Positives = 103/300 (34%), Gaps = 40/300 (13%)
Query: 448 EATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKLR 505
+ + + IGEG+ G + + + RV++K + + + Q ++ +++L + R
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 64
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
H +++ I + ++ H+ L L K L +
Sbjct: 65 HENIIGINDIIRAPTIEQMKD----VYLVTHLMGADLYKLL----KTQHLSNDHICYFLY 116
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRG---- 621
RG++++H+ + +LK N+LL+ K+ + + + +
Sbjct: 117 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 173
Query: 622 --------QYVSNQPGDGAKEDVYQLGVILLQVITGKQV-KSTSEVDGLKLQLETCLAEA 672
+ + N G D++ +G IL ++++ + + +D L L + +
Sbjct: 174 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 233
Query: 673 PSKLRAEADPSVRGTYAYDSLRTTVEITI--------------NCLSKDAAKRPSIEDVL 718
L + R + V L+ + KR +E L
Sbjct: 234 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 293
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.0 bits (243), Expect = 5e-23
Identities = 58/295 (19%), Positives = 115/295 (38%), Gaps = 33/295 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKL 504
A ++ IGEG+ G+++K G V++K ++++ + +P S ++ V +L L
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64
Query: 505 ---RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
H ++V + C ++ D + LV EH+ D + +
Sbjct: 65 ETFEHPNVVRLFDVCTVSRTDRETK---LTLVFEHVDQDLTT--YLDKVPEPGVPTETIK 119
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP-LPSKKGLESPLR 620
++ RG+ FLH+ + +LK +NIL+ + KL+ + + + S + + +
Sbjct: 120 DMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 176
Query: 621 GQYVSNQPGD------GAKEDVYQLGVILLQVITGKQ-VKSTSEVDGLKLQLETCLAEAP 673
P D++ +G I ++ K + +S+VD L L+
Sbjct: 177 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 236
Query: 674 ------SKLRAEADPSVRGTYAYDSLRTTVEITIN----CLSKDAAKRPSIEDVL 718
L +A S + E+ + CL+ + AKR S L
Sbjct: 237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 291
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.6 bits (242), Expect = 6e-23
Identities = 48/313 (15%), Positives = 114/313 (36%), Gaps = 64/313 (20%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQ-RHLPQSLMQHVELL 501
+ +GEG+ GQ+ ++V+VK LK L+ +E++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 502 SKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM------ 554
+ +H++++++LG C +++++E+ S G+LR+YL + +
Sbjct: 73 KMIGKHKNIINLLGACT--------QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 124
Query: 555 -------LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS---- 603
L ++ RG+++L + +L N+L+ + K++
Sbjct: 125 SHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGL 181
Query: 604 -------GYNIPLPSKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQV--KS 654
Y + + + + + ++ + DV+ GV+L ++ T
Sbjct: 182 ARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPG 240
Query: 655 TSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSI 714
+ KL E + PS E + +C ++RP+
Sbjct: 241 VPVEELFKLLKEGHRMDKPSNCTNEL----------------YMMMRDCWHAVPSQRPTF 284
Query: 715 EDVLWNLQYSIQV 727
+ ++ +L + +
Sbjct: 285 KQLVEDLDRIVAL 297
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.6 bits (242), Expect = 7e-23
Identities = 50/309 (16%), Positives = 101/309 (32%), Gaps = 58/309 (18%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF------LTDGSRVSVKCLKLKQRHLP-QSLMQHVELLSK 503
+ +G G+ GQ+ + V+VK LK H ++LM +++L
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------------ 551
+ H V L G + +++E G+L YL +
Sbjct: 73 IGHHLNVVNLLGACTK------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 126
Query: 552 -KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610
KD L + +G++FL + +L NILL + K+ + +
Sbjct: 127 YKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARD 183
Query: 611 SKKGLESPLRGQYVS----------NQPGDGAKEDVYQLGVILLQVITGKQV---KSTSE 657
K + +G + DV+ GV+L ++ + +
Sbjct: 184 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 243
Query: 658 VDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDV 717
+ + E AP E + ++C + ++RP+ ++
Sbjct: 244 EEFCRRLKEGTRMRAPDYTTPEM----------------YQTMLDCWHGEPSQRPTFSEL 287
Query: 718 LWNLQYSIQ 726
+ +L +Q
Sbjct: 288 VEHLGNLLQ 296
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.9 bits (243), Expect = 8e-23
Identities = 45/277 (16%), Positives = 97/277 (35%), Gaps = 41/277 (14%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGH 515
++G G G++ + F + ++K L+ + + VEL + + H+V I+
Sbjct: 19 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-----ARREVELHWRASQCPHIVRIVD- 72
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
Y++ + +V+E + G L + D + + I+ +Q+LH
Sbjct: 73 ---VYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 128
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQY----------VS 625
+ I ++K EN+L + +K+ V
Sbjct: 129 ---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 185
Query: 626 NQPGDGAKEDVYQLGVILLQVITGK----QVKSTSEVDGLKLQLETCLAEAPSKLRAEAD 681
D++ LGVI+ ++ G + G+K ++ E P+ +E
Sbjct: 186 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 245
Query: 682 PSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
V+ + N L + +R +I + +
Sbjct: 246 EEVK------------MLIRNLLKTEPTQRMTITEFM 270
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.8 bits (240), Expect = 1e-22
Identities = 53/296 (17%), Positives = 107/296 (36%), Gaps = 47/296 (15%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK------QRHLPQS 493
F E ++ + +D +G G + K + G + + K +K + + +
Sbjct: 3 FRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 59
Query: 494 LMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKD 553
+ + V +L +++H +++++ + V L+LE ++ G L D+ +K+
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYE--------NKTDVILILELVAGGELFDF---LAEKE 108
Query: 554 MLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKK 613
L + + GV +LH+ I +LK ENI+L K I
Sbjct: 109 SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165
Query: 614 GLESPLRGQY-----------VSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLK 662
++ + + N G + D++ +GVI +++G
Sbjct: 166 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 225
Query: 663 LQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ E + + A D +R L KD KR +I+D L
Sbjct: 226 ANVSAVNYEFEDEYFSNTSAL-----AKDFIR-------RLLVKDPKKRMTIQDSL 269
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.9 bits (240), Expect = 1e-22
Identities = 48/307 (15%), Positives = 117/307 (38%), Gaps = 52/307 (16%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHR 507
+ ++ IG+G+ G+++K G +V++K + ++ + P + ++ +++L L+H
Sbjct: 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V+++ C + +++LV + + K + + + M +++
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS------GYNIPLPSKKGLESPLRG 621
L+ I ++K N+L+ + KL+ +++ S+ +
Sbjct: 130 ------LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVV 183
Query: 622 -------QYVSNQPGDGAKEDVYQLGVILLQVITGKQV-KSTSEVDGLKLQLETCLAEAP 673
+ + + G D++ G I+ ++ T + + +E L L + C + P
Sbjct: 184 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243
Query: 674 ----------------------SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKR 711
K++ VR YA D + L D A+R
Sbjct: 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID-------KLLVLDPAQR 296
Query: 712 PSIEDVL 718
+D L
Sbjct: 297 IDSDDAL 303
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.4 bits (239), Expect = 2e-22
Identities = 44/289 (15%), Positives = 101/289 (34%), Gaps = 50/289 (17%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL--KLKQRHLPQS---LMQHVELLSKLRH 506
F ++G G+ G +YKG + +G +V + +L++ P++ ++ +++ + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
H+ +LG C+ STV L+ + + G L DY + KD + + +
Sbjct: 71 PHVCRLLGICL---------TSTVQLITQLMPFGCLLDY--VREHKDNIGSQYLLNWCVQ 119
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL-----------SGYNIPLPSKKGL 615
+G+ +L + +L N+L+ K+ K
Sbjct: 120 IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 616 ESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQV--KSTSEVDGLKLQLETCLAEAP 673
+ + + ++ + DV+ GV + +++T + + + P
Sbjct: 177 IKWMALESILHRIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 235
Query: 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
+ I + C DA RP +++
Sbjct: 236 PICTIDV----------------YMIMVKCWMIDADSRPKFRELIIEFS 268
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.8 bits (240), Expect = 2e-22
Identities = 48/308 (15%), Positives = 114/308 (37%), Gaps = 38/308 (12%)
Query: 439 RGFSLEEIEEAT----NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK--LKQRHLP 491
GF +E+ + + +G G+ G + G++V++K L +
Sbjct: 2 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFA 61
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + LL +RH +++ +L T + + + +LV+ + G+ L K
Sbjct: 62 KRAYRELRLLKHMRHENVIGLLDVF--TPDETLDDFTDFYLVMPFM--GTDLGKL---MK 114
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611
+ L + ++ +G++++H A GI +LK N+ +++ K+ + + +
Sbjct: 115 HEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQA 171
Query: 612 KKGLESPLRGQY------VSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQL 665
+ + ++ + N D++ +G I+ ++ITGK + S+ ++
Sbjct: 172 DSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI 231
Query: 666 ETCLAEAPSKLRAEADPSVRGTYAYDSLRTT---------------VEITINCLSKDAAK 710
P++ Y V + L DA +
Sbjct: 232 MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQ 291
Query: 711 RPSIEDVL 718
R + + L
Sbjct: 292 RVTAGEAL 299
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 93.0 bits (230), Expect = 2e-21
Identities = 42/292 (14%), Positives = 104/292 (35%), Gaps = 38/292 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRH 508
+ IGEG+ G +YK G ++K ++L++ +P + ++ + +L +L+H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V + +T + LV EH+ + + L+ + ++
Sbjct: 62 IVKLYDVI--------HTKKRLVLVFEHLDQDLKKLLD---VCEGGLESVTAKSFLLQLL 110
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLES---------PL 619
G+ + H + +LK +N+L+++ K++ + + +
Sbjct: 111 NGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYR 167
Query: 620 RGQYVSNQPGDGAKEDVYQLGVILLQVITGKQ-VKSTSEVDGLKLQLETC-------LAE 671
+ D++ +G I +++ G SE D L
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 672 APSKLRAEADPSVRGTYAYDSLRTTV-----EITINCLSKDAAKRPSIEDVL 718
+ + + +V ++S + ++ L D +R + + L
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.3 bits (231), Expect = 3e-21
Identities = 49/283 (17%), Positives = 96/283 (33%), Gaps = 43/283 (15%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLK----LKQRHLPQSLMQHVELLSKLR 505
+F ++G+GS G+++ ++K LK L + ++++ L
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
H L + T +F V+E+++ G L ++ + +
Sbjct: 62 HPFLTHMFCTFQ--------TKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAA 110
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLESPLRGQY 623
G+QFLH+ GI +LK +NILLDK K++ G + G
Sbjct: 111 EIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTP 167
Query: 624 VSNQP------GDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677
P D + GV+L +++ G+ + + L + P L
Sbjct: 168 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLE 227
Query: 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720
EA ++ + ++ KR + +
Sbjct: 228 KEA----------------KDLLVKLFVREPEKRLGVRGDIRQ 254
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.9 bits (227), Expect = 5e-21
Identities = 53/292 (18%), Positives = 108/292 (36%), Gaps = 38/292 (13%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRH 508
NF IGEG+ G +YK G V++K ++L +P + ++ + LL +L H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V D +T + ++LV E + + + P + +
Sbjct: 63 IV--------KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 112
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN----IPLPSKKGLESPLRGQYV 624
+G+ F H + + +LK +N+L++ KL+ + +P + + Y
Sbjct: 113 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 625 S-----NQPGDGAKEDVYQLGVILLQVITGKQV-KSTSEVDGLKLQLETCLAEAPSKLRA 678
+ D++ LG I +++T + + SE+D L T
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 679 -EADPSVRGTYAYDSLRTTVEITIN-----------CLSKDAAKRPSIEDVL 718
+ P + ++ + + ++ L D KR S + L
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 91.7 bits (227), Expect = 7e-21
Identities = 47/293 (16%), Positives = 100/293 (34%), Gaps = 53/293 (18%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK---LKQRHLPQSLMQ 496
+SL+ +F +G GS G+++ +G ++K LK + + +
Sbjct: 1 YSLQ-------DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND 53
Query: 497 HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLK 556
+LS + H ++ + G +F+++++I G L L ++
Sbjct: 54 ERLMLSIVTHPFIIRMWGTFQ--------DAQQIFMIMDYIEGGELFSLLRKSQRFPNPV 105
Query: 557 WPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI------PLP 610
A + L + I +LK ENILLDK K++ +
Sbjct: 106 AKFYAAEVC------LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 159
Query: 611 SKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA 670
+ G + + VS +P + D + G+++ +++ G S ++
Sbjct: 160 TLCGTPDYIAPEVVSTKPYN-KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL 218
Query: 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKR-----PSIEDVL 718
P + + +++D ++R EDV
Sbjct: 219 RFPPFFNEDVKDLLSR----------------LITRDLSQRLGNLQNGTEDVK 255
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.0 bits (222), Expect = 5e-20
Identities = 57/308 (18%), Positives = 117/308 (37%), Gaps = 35/308 (11%)
Query: 436 PPFRGFSLEEIE-EATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHL--P 491
P F L + E + + +G G+ G + F G RV+VK L + +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + LL ++H +++ +L T + V+LV G+ + + K
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVF--TPARSLEEFNDVYLVTHL--MGADLN---NIVK 114
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611
L +I RG++++H + I +LK N+ +++ K+ + + +
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 612 KKGLESPLRG------QYVSNQPGDGAKEDVYQLGVILLQVITGKQV-KSTSEVDGLKLQ 664
+ + + + N D++ +G I+ +++TG+ + T +D LKL
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Query: 665 LE---TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITIN-----------CLSKDAAK 710
L T AE K+ +E+ + + + I L D+ K
Sbjct: 232 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 291
Query: 711 RPSIEDVL 718
R + L
Sbjct: 292 RITAAQAL 299
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.5 bits (213), Expect = 3e-19
Identities = 43/294 (14%), Positives = 97/294 (32%), Gaps = 40/294 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHR 507
++ IGEG+ G ++K V++K ++L +P S ++ + LL +L+H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V + + + LV E + + L + +
Sbjct: 62 NIVRLHDVLH--------SDKKLTLVFEFCDQDLKKYF---DSCNGDLDPEIVKSFLFQL 110
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESP--------- 618
+G+ F H+ + +LK +N+L+++ KL+ + + +
Sbjct: 111 LKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWY 167
Query: 619 LRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQ--VKSTSEVDGLKLQLETCLAEAPSKL 676
+ D++ G I ++ + D LK +
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
Query: 677 RAEAD-PSVRGTYAYDSLRTTVEITIN-----------CLSKDAAKRPSIEDVL 718
+ P + Y + + V + L + +R S E+ L
Sbjct: 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.5 bits (211), Expect = 5e-19
Identities = 44/283 (15%), Positives = 92/283 (32%), Gaps = 48/283 (16%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK------QRHLPQSLMQHVELLSK 503
+ + L+G G G +Y G ++D V++K ++ + + V LL K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
+ ++ D + L+LE ++ L+ +
Sbjct: 64 VSSGF------SGVIRLLDWFERPDSFVLILERPEPVQDLFDF--ITERGALQEELARSF 115
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLD-KALTAKLSGYNIPLPSKKGLESPLRG- 621
V+ H G+ ++K ENIL+D KL + K + + G
Sbjct: 116 FWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 172
Query: 622 ------QYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675
+++ G V+ LG++L ++ G E ++ +
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR 226
Query: 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVL 718
+ +E + CL+ + RP+ E++
Sbjct: 227 VSSEC----------------QHLIRWCLALRPSDRPTFEEIQ 253
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.8 bits (214), Expect = 5e-19
Identities = 48/275 (17%), Positives = 99/275 (36%), Gaps = 42/275 (15%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK---LKQRHLPQSLMQHVELLSKLRH 506
N+FD L+G+G+ G++ G ++K L+ + + + +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
L ++ T + V+E+ + G L +L ++ + +
Sbjct: 65 PFLTALKYAFQ--------THDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAE 113
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKKGLESPLRG--Q 622
+++LH+ + ++K EN++LDK K++ G S G +
Sbjct: 114 IVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 623 YVSNQP----GDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678
Y++ + G D + LGV++ +++ G+ + + L + P L
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP 230
Query: 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS 713
EA + L KD +R
Sbjct: 231 EA----------------KSLLAGLLKKDPKQRLG 249
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 85.7 bits (211), Expect = 1e-18
Identities = 42/301 (13%), Positives = 96/301 (31%), Gaps = 51/301 (16%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRH 508
+++ +G G ++++ +T+ +V VK LK ++ + + + +++L LR +
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK---KKIKREIKILENLRGGPN 91
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
++++ T LV EH++N + L +
Sbjct: 92 IITLADIV------KDPVSRTPALVFEHVNNTDFKQLY------QTLTDYDIRFYMYEIL 139
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKA---------LTAKLSGYNIPLPSKKGLESPL 619
+ + + H+ GI ++K N+++D A+ +
Sbjct: 140 KALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 196
Query: 620 RGQYVSNQPGDGAKEDVYQLGVILLQVITGKQ--VKSTSEVDGLKLQLET----CLAEAP 673
+ + + D++ LG +L +I K+ D L + L +
Sbjct: 197 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 256
Query: 674 SKLRAEADPSVRGTYAYDSLRTTVEITIN----------------CLSKDAAKRPSIEDV 717
K E DP S + + L D R + +
Sbjct: 257 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
Query: 718 L 718
+
Sbjct: 317 M 317
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.4 bits (200), Expect = 3e-17
Identities = 45/282 (15%), Positives = 97/282 (34%), Gaps = 44/282 (15%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLK----LKQRHLPQSLMQHVELLS 502
NF+ ++G G+ G+++ G ++K LK +++ + ++L
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
+R ++T T + + L+L++I+ G L +L+ ++ + +
Sbjct: 84 HIRQSP-------FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG 136
Query: 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQ 622
I+ A L GI ++K ENILLD L+ + +
Sbjct: 137 EIVLA------LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF 190
Query: 623 YV-----------SNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE 671
G D + LGV++ +++TG + + ++ + +
Sbjct: 191 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK 250
Query: 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS 713
+ E + ++ L KD KR
Sbjct: 251 SEPPYPQEMSALAK------------DLIQRLLMKDPKKRLG 280
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 81.8 bits (201), Expect = 3e-17
Identities = 42/283 (14%), Positives = 98/283 (34%), Gaps = 46/283 (16%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRH 506
+ FD +G GS G++ G+ ++K L K+ + + + +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
LV + + V+E+++ G + +L ++ P
Sbjct: 101 PFLVKLEFSFKDNSNLYM--------VMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQ 149
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI------PLPSKKGLESPLR 620
++LH + + +LK EN+L+D+ +++ + + G L
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALA 206
Query: 621 GQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680
+ + ++ + D + LGV++ ++ G + + ++ + PS ++
Sbjct: 207 PEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKR-----PSIEDVL 718
+R N L D KR + D+
Sbjct: 266 KDLLR----------------NLLQVDLTKRFGNLKNGVNDIK 292
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 79.5 bits (195), Expect = 7e-17
Identities = 40/291 (13%), Positives = 82/291 (28%), Gaps = 42/291 (14%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
N + IG GS G +Y G + G V++K +K +H L ++ ++
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVG 64
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
+ + C G +V+E + + + +
Sbjct: 65 IPTIRWCG-------AEGDYNVMVMELLGPSLEDLF---NFCSRKFSLKTVLLLADQMIS 114
Query: 570 GVQFLHTGVAPGIFGNNLKTENIL------------LDKALTAKLSGYNIPLPSKKGLES 617
++++H + ++K +N L +D L K
Sbjct: 115 RIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENK 171
Query: 618 PLRG--QYVS----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAE 671
L G +Y S ++D+ LG +L+ G + + + E +
Sbjct: 172 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 231
Query: 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
S T + C S +P + +
Sbjct: 232 KMSTPIEVLCKGYP-----SEFATYLN---FCRSLRFDDKPDYSYLRQLFR 274
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 77.9 bits (191), Expect = 3e-16
Identities = 39/295 (13%), Positives = 79/295 (26%), Gaps = 48/295 (16%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
++ IGEGS G +++G L + +V++K + L L
Sbjct: 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTG 62
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
+ + + G LV++ +
Sbjct: 63 IPNVYYFG-------QEGLHNVLVIDLLGPSLEDLLD---LCGRKFSVKTVAMAAKQMLA 112
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLD------------------KALTAKLSGYNIPLPS 611
VQ +H + ++K +N L+ K ++ +IP
Sbjct: 113 RVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYRE 169
Query: 612 KKGLESPLRGQYVS----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLET 667
KK L R Y+S ++D+ LG + + + G + K + E
Sbjct: 170 KKNLSGTAR--YMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER 227
Query: 668 CLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722
+ S E + + + P + +
Sbjct: 228 IGEKKQSTPLRELCAGFPEEFY--------KYMHYARNLAFDATPDYDYLQGLFS 274
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.7 bits (177), Expect = 3e-14
Identities = 46/297 (15%), Positives = 96/297 (32%), Gaps = 33/297 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKLRHR 507
+ IG G+QG + + V++K L + + + + + L+ + H+
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
+++S+L T Q V+LV+E + + + + M +M I
Sbjct: 77 NIISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 134
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKKGLESPLRGQYVSNQ 627
+H + P +LD L A+ +G + + + +
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 628 PGDGAKEDVYQLGVILLQVITGKQ-VKSTSEVDGLKLQLETCLAEAPSKLRA-------- 678
D++ +G I+ +++ K +D +E P ++
Sbjct: 194 GYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY 252
Query: 679 -EADPSVRGTYAYDSLRTTVEITIN----------------CLSKDAAKRPSIEDVL 718
E P G ++ + L D AKR S++D L
Sbjct: 253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 72.1 bits (175), Expect = 3e-14
Identities = 61/305 (20%), Positives = 122/305 (40%), Gaps = 12/305 (3%)
Query: 31 PSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNS----RVTELTVIGNK 86
P + + L Q++K L P L W T+ C + + L ++C RV L + G
Sbjct: 5 PQDKQALLQIKKDLGNPTTLSSWLPTTDCC---NRTWLGVLCDTDTQTYRVNNLDLSGLN 61
Query: 87 SSPAHSPKPTFGKFSA-SQQSLSANFNI-DRFFTILTKLSNLKVLSLVSLGLWGPLPSKI 144
+ + + + N+ + KL+ L L + + G +P +
Sbjct: 62 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL 121
Query: 145 NRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNL 202
++ +L L+ S N + G +P I+SL NL I N ++G++PD L + +
Sbjct: 122 SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181
Query: 203 GGNDFGP-KFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261
N P+ + ++ + + ++ S L D+ Q + N + +
Sbjct: 182 SRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVG 241
Query: 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTW 321
++ L+L N++ LP ++ L+ + +S N L G++P + + +
Sbjct: 242 LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN 301
Query: 322 NCLSG 326
CL G
Sbjct: 302 KCLCG 306
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 56.3 bits (134), Expect = 4e-09
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 137 WGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVL 196
K+ +L L++ +N IYG +P +T LK L S+ ++ N L G +P L
Sbjct: 233 LAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQR 292
Query: 197 LEELNLGGNDF--GPKFPSLS 215
+ N G P+ +
Sbjct: 293 FDVSAYANNKCLCGSPLPACT 313
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 70.8 bits (172), Expect = 1e-13
Identities = 46/311 (14%), Positives = 96/311 (30%), Gaps = 54/311 (17%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
+G G ++ + + + V++K ++ + ++ ++LL ++
Sbjct: 20 KLGWGHFSTVWLAKDMVNNTHVAMKIVR-GDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 78
Query: 517 ---ILTYQDHPNT--GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
IL DH N + V +V+ G L + + I G+
Sbjct: 79 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138
Query: 572 QFLHTGVAPGIFGNNLKTENILLDK------------ALTAKLSGYNIPLPSKKGLESPL 619
++H GI ++K EN+L++ A Y+ +
Sbjct: 139 DYMHRR--CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYR 196
Query: 620 RGQYVSNQPGDGAKEDVYQLGVILLQVITGK------QVKSTSEVDGLKLQLETCLAEAP 673
+ + P G D++ ++ ++ITG + S ++ D Q+ L E P
Sbjct: 197 SPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP 255
Query: 674 SKLRAEADPSVRGTYAYDSLRTTVEITI--------------------------NCLSKD 707
S L + + LR ++ L D
Sbjct: 256 SYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLD 315
Query: 708 AAKRPSIEDVL 718
KR ++
Sbjct: 316 PRKRADAGGLV 326
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 65.4 bits (158), Expect = 7e-12
Identities = 34/175 (19%), Positives = 70/175 (40%), Gaps = 10/175 (5%)
Query: 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL 183
+NL LSL L + +L L++++N I P ++ L L + L N
Sbjct: 219 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 274
Query: 184 LNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLK 243
++ P L S KN+ + L N++ P + + +L+
Sbjct: 275 ISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 332
Query: 244 QFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHN 298
+ ++N S L +L +I +L+ NQ+S+ P ++ ++ + ++
Sbjct: 333 RLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
L+ FN + ++ L+ L+ L + + S + ++ L+ N I
Sbjct: 310 TYLTLYFNNISDISPVSSLTKLQRLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLT 367
Query: 165 PMEITSLKNLKSIVLADN 182
P + +L + + L D
Sbjct: 368 P--LANLTRITQLGLNDQ 383
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.4 bits (137), Expect = 2e-09
Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 6/204 (2%)
Query: 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL 183
+ +L L + + +L L + +N I P L L+ + L+ N
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 184 LNGSVPDLQRLV-LLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS--EIPSGLKNFD 240
L + + + L + ++ V L N L+S +
Sbjct: 91 LKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 150
Query: 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
+L I+ N Q PS+ L+L GN++++ ++ L + +S N +
Sbjct: 151 KLSYIRIADTNITTIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSI 207
Query: 301 IGKLPSCIGSNSLNRTVVSTWNCL 324
+ + R + N L
Sbjct: 208 SAVDNGSLANTPHLRELHLNNNKL 231
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.4 bits (137), Expect = 2e-09
Identities = 31/192 (16%), Positives = 72/192 (37%), Gaps = 6/192 (3%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDF 207
+L++ +N I + +LKNL +++L +N ++ P LV LE L L N
Sbjct: 32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 91
Query: 208 GPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISS--NNFVGPIQSFLFSLPS 265
+ K + + + N + S +Q+ ++ + G +
Sbjct: 92 KELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 151
Query: 266 ILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325
+ Y+ +A ++ +P + S L + + N + + + + + ++N +S
Sbjct: 152 LSYIRIADTNITT-IPQGLPPS--LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS 208
Query: 326 GVNTKYQHPYSF 337
V+
Sbjct: 209 AVDNGSLANTPH 220
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.3 bits (111), Expect = 3e-06
Identities = 26/210 (12%), Positives = 52/210 (24%), Gaps = 29/210 (13%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L L+ L L L L V + + + + ++
Sbjct: 75 FAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTN 134
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNF 239
Q + L + + + L ++ + L N + + LK
Sbjct: 135 PLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGL 194
Query: 240 DQLKQFDISSNNFVGPIQSFL-----------------------FSLPSILYLNLAGNQL 276
+ L + +S N+ L I + L N +
Sbjct: 195 NNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNI 254
Query: 277 SE------ALPVNISCSAKLNFVEISHNLL 300
S P + A + V + N +
Sbjct: 255 SAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 44.6 bits (104), Expect = 2e-05
Identities = 21/112 (18%), Positives = 33/112 (29%), Gaps = 4/112 (3%)
Query: 212 PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNL 271
L + + L+NN + KN L + +N L + L L
Sbjct: 27 KDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 86
Query: 272 AGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC 323
+ NQL E +L H I K+ + + VV
Sbjct: 87 SKNQLKELPEKMPKTLQELRV----HENEITKVRKSVFNGLNQMIVVELGTN 134
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 35/234 (14%), Positives = 71/234 (30%), Gaps = 14/234 (5%)
Query: 13 LFLVIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLP-SSSSLKIV 71
L + P + L R+ +L E PE + + +
Sbjct: 62 LINNKISKISPGAFAPL-VKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVF 120
Query: 72 CTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSL 131
+++ + + N + F A+ NI L +L L L
Sbjct: 121 NGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGL--PPSLTELHL 178
Query: 132 VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDL 191
+ + + +L L +S N I + + +L+ + L +N L L
Sbjct: 179 DGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGL 238
Query: 192 QRLVLLEELNLGGNDF---------GPKFPSLSKNIVSVILRNNSLR-SEIPSG 235
++ + L N+ P + + + V L +N ++ EI
Sbjct: 239 ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPS 292
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 39.3 bits (90), Expect = 0.001
Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%)
Query: 108 SANFNIDRFFTILTKLSNLKVLSLVS--LGLWGPLPSKINRFWSLEVLNISSNFIYGEIP 165
N ++ L+ + V+ L + L G L + I+ I IP
Sbjct: 108 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI-TTIP 166
Query: 166 MEITSLKNLKSIVLADNLLNGSVPD----LQRLVLLEELNLGGNDFGPKFPSLSKNIVSV 221
+ +L + L N + L L L + + + ++ +
Sbjct: 167 QGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLREL 224
Query: 222 ILRNNSLRSEIPSGLKNFDQLKQFDISSNNF------VGPIQSFLFSLPSILYLNLAGNQ 275
L NN L ++P GL + ++ + +NN + S ++L N
Sbjct: 225 HLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283
Query: 276 LS 277
+
Sbjct: 284 VQ 285
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 51.7 bits (123), Expect = 4e-08
Identities = 18/141 (12%), Positives = 38/141 (26%), Gaps = 9/141 (6%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHR-HLVSILGH 515
L+GEG + ++ + VK K+ + + +
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
L V V N L + + + + ++ V +
Sbjct: 66 RALQKLQGLA----VPKVYAWEGNAVLMELIDAKELYRVRVENPD-EVLDMILEEVAKFY 120
Query: 576 TGVAPGIFGNNLKTENILLDK 596
GI +L N+L+ +
Sbjct: 121 ---HRGIVHGDLSQYNVLVSE 138
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 48.9 bits (116), Expect = 1e-07
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 179 LADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKN 238
LA L + L++L+L+ L+L N P+L+ +L+ + E G+ N
Sbjct: 5 LAHKDLT-VLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVAN 63
Query: 239 FDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAGNQLSE 278
+L++ + +N L S P ++ LNL GN L +
Sbjct: 64 LPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.9 bits (103), Expect = 6e-06
Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 7/123 (5%)
Query: 152 VLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKF 211
VL+++ + + + L + + L+ N L P L L LE L N
Sbjct: 2 VLHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 212 PSLSKNIV-SVILRNNSLRS-EIPSGLKNFDQLKQFDISSNNFVGP---IQSFLFSLPSI 266
+ + ++L NN L+ L + +L ++ N+ + LPS+
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 119
Query: 267 LYL 269
+
Sbjct: 120 SSI 122
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.7 bits (114), Expect = 1e-06
Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 8/187 (4%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L L L L GL P +L+ L + N + L NL + L
Sbjct: 101 FHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160
Query: 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRN---NSLRSEIPSG 235
N ++ + L L+ L L N P +++ ++ N+L +
Sbjct: 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEA 220
Query: 236 LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295
L L+ ++ N +V ++ + + +++ +LP + A + +
Sbjct: 221 LAPLRALQYLRLNDNPWVCDCRARPL-WAWLQKFRGSSSEVPCSLPQRL---AGRDLKRL 276
Query: 296 SHNLLIG 302
+ N L G
Sbjct: 277 AANDLQG 283
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 44.4 bits (103), Expect = 3e-05
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 158 NFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKN 217
N EI +L+ + +++N L +P L LE L N + P L +N
Sbjct: 270 NASSNEIRSLCDLPPSLEELNVSNNKLI-ELPAL--PPRLERLIASFNHLA-EVPELPQN 325
Query: 218 IVSVILRNNSLRS--EIPSGLKN 238
+ + + N LR +IP +++
Sbjct: 326 LKQLHVEYNPLREFPDIPESVED 348
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 42.5 bits (98), Expect = 1e-04
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 144 INRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLG 203
+ SLE LN+S+N + E+P L+ L + + N L VP+L L++L++
Sbjct: 280 CDLPPSLEELNVSNNKL-IELPALPPRLERL---IASFNHLA-EVPEL--PQNLKQLHVE 332
Query: 204 GNDFGPKFPSLSKNIVSVILRNNS 227
N +FP + +++ LR NS
Sbjct: 333 YNPL-REFPDIPESVED--LRMNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 39.0 bits (89), Expect = 0.001
Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 10/94 (10%)
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282
N+ +EI S L++ ++S+N + P + L + N L+E +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNK----LIELPALPPRLERLIASFNHLAE-VPE 321
Query: 283 NISCSAKLNFVEISHNLL--IGKLPSCIGSNSLN 314
L + + +N L +P + +N
Sbjct: 322 LPQ---NLKQLHVEYNPLREFPDIPESVEDLRMN 352
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 4e-05
Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 15/93 (16%)
Query: 197 LEELNLGGNDFGPK-----FPSLSKNIVSVILRNNSLRSE----IPSGLKNFDQLKQFDI 247
++ L++ + P L + V L + L I S L+ L + ++
Sbjct: 4 IQSLDIQCEELSDARWAELLPLL-QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 248 SSNNF----VGPIQSFLFS-LPSILYLNLAGNQ 275
SN V + L + I L+L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (101), Expect = 7e-05
Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 13/105 (12%)
Query: 135 GLWGPLPSKINRFWSLEVLNISSNFIYGE----IPMEITSLKNLKSIVLADNLLNGSVPD 190
G+ L VL ++ + + + + +L+ + L++N L +
Sbjct: 356 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 415
Query: 191 L------QRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLR 229
Q LLE+L L + + + ++ SLR
Sbjct: 416 QLVESVRQPGCLLEQLVLYDIYWSEEMEDR---LQALEKDKPSLR 457
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (100), Expect = 9e-05
Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 149 SLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD-----LQRLVLLEELNL 202
++ L+I + E+ L+ + + L D L + L+ L ELNL
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 203 GGNDFGPK-FPSLSKNIVSVILRNNSLR 229
N+ G + + + + + L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLS 90
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.7 bits (98), Expect = 2e-04
Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 5/91 (5%)
Query: 215 SKNIVSVILRNNSLRSE-IPSGLKNFDQLKQFDISSNNF----VGPIQSFLFSLPSILYL 269
S +I S+ ++ L L Q + + I S L P++ L
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 60
Query: 270 NLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
NL N+L + + + +I L
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSL 91
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (89), Expect = 0.002
Identities = 10/91 (10%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 229 RSEIPSGLKNFDQLKQFDISSNNF----VGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284
R + L+ ++ + + + L + S+ L+L+ N L +A + +
Sbjct: 358 RELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQL 417
Query: 285 S-----CSAKLNFVEISHNLLIGKLPSCIGS 310
L + + ++ + +
Sbjct: 418 VESVRQPGCLLEQLVLYDIYWSEEMEDRLQA 448
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (91), Expect = 7e-04
Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 31/204 (15%)
Query: 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180
+K+++ ++ L LP + + +L++S N +Y + L + L
Sbjct: 7 SKVASHLEVNCDKRNLTA-LPPDLPK--DTTILHLSENLLYTFSLATLMPYTRLTQLNL- 62
Query: 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFP--------------------------SL 214
D + L +L L+L N
Sbjct: 63 DRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRG 122
Query: 215 SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274
+ + L+ N L++ P L +L++ +++NN L L ++ L L N
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182
Query: 275 QLSEALPVNISCSAKLNFVEISHN 298
L +P S L F + N
Sbjct: 183 SLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.9 bits (87), Expect = 0.001
Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG--PKFPSLSKNIVS 220
++ + ++ + L L S PDL + LN + ++S
Sbjct: 11 QLKLIMSKRYDGSQQALDLKGLR-SDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLS 69
Query: 221 VILRNNSLR--SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278
+ L NN L ++ S ++ LK ++S N + + L L GN LS+
Sbjct: 70 LNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSD 129
Query: 279 ALP 281
Sbjct: 130 TFR 132
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 740 | |||
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 100.0 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 100.0 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 100.0 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.98 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.97 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.96 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.96 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.95 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.94 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.92 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.9 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.9 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.9 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.89 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.88 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.88 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.87 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.87 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.86 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.85 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.82 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.74 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.74 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.73 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.72 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.71 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.7 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.68 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.68 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.67 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.66 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.65 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.62 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.55 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.52 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 99.01 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.84 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.64 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.54 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 98.23 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.11 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 98.1 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 98.09 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.98 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.72 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 97.52 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 97.42 |
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=364.68 Aligned_cols=250 Identities=18% Similarity=0.313 Sum_probs=195.4
Q ss_pred CCCCCCEEECCCCCCEEEEEECC-CC---EEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCC
Q ss_conf 99999923207874089988349-98---99999953124-557368999999986016864111310335303589999
Q 004637 452 NFDPTNLIGEGSQGQLYKGFLTD-GS---RVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 452 ~f~~~~~lG~G~~g~Vyk~~~~~-g~---~vavK~l~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 526 (740)
+|+..++||+|+||.||+|+.+. ++ .||||.+.... ....+.|.+|++++++++|||||+++|+|. .
T Consensus 27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~--------~ 98 (299)
T d1jpaa_ 27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT--------K 98 (299)
T ss_dssp GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--------S
T ss_pred HCEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE--------E
T ss_conf 42785698027882999999957997889999999784459899999999999998579988861899996--------2
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCC
Q ss_conf 97269998424576400110123678878999999999999999999871999980203888995111499924470589
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 606 (740)
+...++|||||++|+|.+++.. ....++|..+..++.|+|+||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 99 ~~~~~iv~Ey~~~g~L~~~~~~--~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG 173 (299)
T d1jpaa_ 99 STPVMIITEFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFG 173 (299)
T ss_dssp SSSCEEEEECCTTEEHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred CCEEEEEEEECCCCCCEEEECC--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCEEEECCCCCEEECCCC
T ss_conf 8877999972279853002104--56799999999999999998898852---798357615044898899919988844
Q ss_pred CCCCCCC--------------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 9888888--------------87776445200279999986643303699999883-99998888420147888885411
Q 004637 607 IPLPSKK--------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAE 671 (740)
Q Consensus 607 l~~~~~~--------------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 671 (740)
+++.... ++..+++||... ...++.++|||||||++|||+| |+.||.+.....+...+......
T Consensus 174 la~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~ 252 (299)
T d1jpaa_ 174 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL 252 (299)
T ss_dssp ----------------------CGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC
T ss_pred CCEECCCCCCCCEEEECCCCCCCCCCCCHHHHH-CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf 315756777765365025666883003878883-6997861214453578999986799999999999999999737889
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 87642213693223878288999999999762466989899989999995653420245
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQEG 730 (740)
Q Consensus 672 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 730 (740)
..+.+++.++.+++.+||+.||++||+|.||++.|+.+.+-++.
T Consensus 253 ---------------~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p~s 296 (299)
T d1jpaa_ 253 ---------------PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNS 296 (299)
T ss_dssp ---------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred ---------------CCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCHHH
T ss_conf ---------------99742269999999997587976892999999999998418621
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=362.05 Aligned_cols=252 Identities=21% Similarity=0.342 Sum_probs=196.3
Q ss_pred HHCCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEECCC--CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCC
Q ss_conf 844999999232078740899883499899999953124--557368999999986016864111310335303589999
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 449 ~~~~f~~~~~lG~G~~g~Vyk~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 526 (740)
..++|...+.||+|+||.||+|+.+ ..||||+++... ....+.|.+|++++++++|||||+++|++.
T Consensus 6 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~--------- 74 (276)
T d1uwha_ 6 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--------- 74 (276)
T ss_dssp CTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC---------
T ss_pred CCCCEEEEEEEEECCCCEEEEEEEC--CEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE---------
T ss_conf 5451899889830788589999999--98999999734699899999999999998479987864567971---------
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCC
Q ss_conf 97269998424576400110123678878999999999999999999871999980203888995111499924470589
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 606 (740)
...+++|||||++|+|.++++. ....+++..+..++.|+|+||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 75 ~~~~~lv~Ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFG 149 (276)
T d1uwha_ 75 APQLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFG 149 (276)
T ss_dssp SSSCEEEEECCCEEEHHHHHHT--SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCC
T ss_pred CCEEEEEEECCCCCCHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHC---CCEECCCCCHHHEEECCCCCEEECCCC
T ss_conf 5589999965899888999852--35789999999999999999888750---999516147899798189978875002
Q ss_pred CCCCCC-----------CCCCCCCCCCCCCC--CCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCH-HHHHHHHHHHCC
Q ss_conf 988888-----------88777644520027--9999986643303699999883999988884201-478888854118
Q 004637 607 IPLPSK-----------KGLESPLRGQYVSN--QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDG-LKLQLETCLAEA 672 (740)
Q Consensus 607 l~~~~~-----------~~~~~~~~~e~~~~--~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~ 672 (740)
+++... .++..+++||.... ...++.++|||||||++|||+||+.||.+..... +...+..... .
T Consensus 150 la~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~-~ 228 (276)
T d1uwha_ 150 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL-S 228 (276)
T ss_dssp CSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSC-C
T ss_pred CEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC-C
T ss_conf 213335567763125665574317999995056899995315163599999999788998998969999999965888-9
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 7642213693223878288999999999762466989899989999995653420
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQV 727 (740)
Q Consensus 673 ~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 727 (740)
+ ... ....+++.++.+++.+||+.||++||||.||+++|+.+.+.
T Consensus 229 p-~~~---------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 229 P-DLS---------KVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp C-CGG---------GSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred C-CCH---------HCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHC
T ss_conf 8-600---------03655549999999997588976892999999999999970
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=358.68 Aligned_cols=247 Identities=18% Similarity=0.308 Sum_probs=196.5
Q ss_pred CCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCCCE
Q ss_conf 49999992320787408998834998999999531245573689999999860168641113103353035899999726
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 530 (740)
++|+..+.||+|+||.||+|++.+++.||||+++.. ....++|.+|++++++++|||||+++|+|. .....
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~--------~~~~~ 75 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL--------EQAPI 75 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC--------SSSSC
T ss_pred HHCEEEEEEEECCCEEEEEEEECCCCEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCCCCCCCEEC--------CCCCE
T ss_conf 995888898208882999999889999999998788-676899999999999668997565352431--------59933
Q ss_pred EEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf 99984245764001101236788789999999999999999998719999802038889951114999244705899888
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~~~ 610 (740)
++|||||++|+|.+++.. ....++|..+..++.|+|.||.|+|. .+|+||||||+|||+|.++.+||+|||+++.
T Consensus 76 ~lv~E~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~ 150 (263)
T d1sm2a_ 76 CLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRF 150 (263)
T ss_dssp EEEEECCTTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC----
T ss_pred EEEEEECCCCCHHHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHHC---CCEEECCCCHHHEEECCCCCEEECCCCHHEE
T ss_conf 799983699918997520--13478899999999999998776531---6431044315326666887768655321002
Q ss_pred CCC----------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 888----------877764452002799999866433036999998839-999888842014788888541187642213
Q 004637 611 SKK----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITG-KQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 611 ~~~----------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
... ++..+++||... ...++.++|||||||++|||+|+ ++|+.......+...+...... ...
T Consensus 151 ~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~---~~p-- 224 (263)
T d1sm2a_ 151 VLDDQYTSSTGTKFPVKWASPEVFS-FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL---YKP-- 224 (263)
T ss_dssp --------------CTTSCCHHHHT-TCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCC---CCC--
T ss_pred CCCCCCEEECCEECCCCCCCHHHHC-CCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC---CCC--
T ss_conf 3688733504300176667857860-7999840332105999999987898887789999999999806888---995--
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 693223878288999999999762466989899989999995653420
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQV 727 (740)
Q Consensus 680 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 727 (740)
..+..++.+++.+||+.||++||+|+||+++|+.+.+.
T Consensus 225 ----------~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es 262 (263)
T d1sm2a_ 225 ----------RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262 (263)
T ss_dssp ----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------CCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHC
T ss_conf ----------43679999999997657976891999999999999857
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=358.65 Aligned_cols=248 Identities=17% Similarity=0.294 Sum_probs=193.2
Q ss_pred HHHCCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCC
Q ss_conf 98449999992320787408998834998999999531245573689999999860168641113103353035899999
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 448 ~~~~~f~~~~~lG~G~~g~Vyk~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 527 (740)
...++|+..+.||+|+||.||+|++++++.||||+++... ...+.|.+|++++++++|||||+++|+|. .
T Consensus 10 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~---------~ 79 (272)
T d1qpca_ 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT---------Q 79 (272)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC---------S
T ss_pred CCHHHEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCC-CCHHHHHHHHHHHHHCCCCCEEEEEEEEC---------C
T ss_conf 3889938867981079828999999999999999986476-88899999999998679998857873104---------5
Q ss_pred CCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCC
Q ss_conf 72699984245764001101236788789999999999999999998719999802038889951114999244705899
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 607 (740)
...++|||||++|+|.+++... ....++|..++.|+.|+++||.|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 80 ~~~~iv~Ey~~~g~L~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGl 155 (272)
T d1qpca_ 80 EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGL 155 (272)
T ss_dssp SSCEEEEECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEECCCCCHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHEEEECCCCEEECCCCC
T ss_conf 9769999957898288887514-78988788999999999999999974---8954675642251562024404234101
Q ss_pred CCCCCC----------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCC-CCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 888888----------8777644520027999998664330369999988399998-88842014788888541187642
Q 004637 608 PLPSKK----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVK-STSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 608 ~~~~~~----------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~-~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
++.... ++..+++||... ...++.++|||||||++|||+||..|+ .......+...+... .....
T Consensus 156 a~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~---~~~~~ 231 (272)
T d1qpca_ 156 ARLIEDNEYTAREGAKFPIKWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---YRMVR 231 (272)
T ss_dssp CEECSSSCEECCTTCCCCTTTSCHHHHH-HCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT---CCCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCCCHHHHH-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC---CCCCC
T ss_conf 4773588644203567744445828983-7999824564525799999996898888888999999999706---88889
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 2136932238782889999999997624669898999899999956534
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSI 725 (740)
Q Consensus 677 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 725 (740)
. .....++.+++.+||+.||++||||+||++.|+.+-
T Consensus 232 p------------~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f 268 (272)
T d1qpca_ 232 P------------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (272)
T ss_dssp C------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C------------CCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 6------------557199999999975889768939999999861132
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=357.33 Aligned_cols=252 Identities=17% Similarity=0.279 Sum_probs=196.3
Q ss_pred HHHHHCCCCCCCEEECCCCCCEEEEEEC-CCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCC
Q ss_conf 9998449999992320787408998834-998999999531245573689999999860168641113103353035899
Q 004637 446 IEEATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 446 l~~~~~~f~~~~~lG~G~~g~Vyk~~~~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 524 (740)
++...++|+..+.||+|+||.||+|+.. +++.||||+++... ...++|.+|++++++++|||||+++|+|.
T Consensus 12 wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~------- 83 (287)
T d1opja_ 12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT------- 83 (287)
T ss_dssp TBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-------
T ss_pred CEECHHHEEEEEEEEECCCEEEEEEEECCCCEEEEEEEECCCC-CHHHHHHHHHHHHHHCCCCCEECCCCCEE-------
T ss_conf 1745799398659820888089999999999699999977761-03999999999998679998826775274-------
Q ss_pred CCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEEC
Q ss_conf 99972699984245764001101236788789999999999999999998719999802038889951114999244705
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~D 604 (740)
++...++|||||++|+|.+++.. .....++|..+..++.|+|.||.|||+ .+|+||||||+|||++.++.+||+|
T Consensus 84 -~~~~~~iv~E~~~~g~l~~~l~~-~~~~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~D 158 (287)
T d1opja_ 84 -REPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVAD 158 (287)
T ss_dssp -SSSSCEEEEECCTTCBHHHHHHH-SCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECC
T ss_pred -ECCEEEEEEECCCCCCHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCEEEECCCCCEEECC
T ss_conf -57854787631467606777530-355415799999999999997888987---8930576045768998999289832
Q ss_pred CCCCCCCCCC----------CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCC-CCCCCHHHHHHHHHHHCCC
Q ss_conf 8998888888----------7776445200279999986643303699999883999988-8842014788888541187
Q 004637 605 YNIPLPSKKG----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKS-TSEVDGLKLQLETCLAEAP 673 (740)
Q Consensus 605 FGl~~~~~~~----------~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~-~~~~~~~~~~~~~~~~~~~ 673 (740)
||+++..... +..+++||... ...++.++|||||||++|||+||..|+. ......+...+... ..
T Consensus 159 FG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~---~~ 234 (287)
T d1opja_ 159 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD---YR 234 (287)
T ss_dssp CCCTTTCCSSSSEEETTEEECGGGCCHHHHH-HCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT---CC
T ss_pred CCCEEECCCCCCEEECCCCCCCCCCCHHHHC-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC---CC
T ss_conf 4454653788722103556654666927872-7999810430217899999986799887742599999998558---88
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 64221369322387828899999999976246698989998999999565342
Q 004637 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 674 ~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
... +.....++.+|+.+||+.||++||||.||++.|+.+.+
T Consensus 235 ~~~------------~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~ 275 (287)
T d1opja_ 235 MER------------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275 (287)
T ss_dssp CCC------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred CCC------------CCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf 888------------74330999999999757797689399999999999987
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=346.33 Aligned_cols=242 Identities=20% Similarity=0.346 Sum_probs=193.7
Q ss_pred HCCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCC
Q ss_conf 44999999232078740899883-49989999995312455736899999998601686411131033530358999997
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 528 (740)
.++|+..+.||+|+||.||+|+. .+|+.||+|+++.......+.+.+|+++++.++|||||++++++.. ..
T Consensus 19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~--------~~ 90 (293)
T d1yhwa1 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV--------GD 90 (293)
T ss_dssp TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------TT
T ss_pred CCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE--------CC
T ss_conf 1053887898128582999999989998999999843017279999999999986799988058577988--------99
Q ss_pred CEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCCC
Q ss_conf 26999842457640011012367887899999999999999999987199998020388899511149992447058998
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~ 608 (740)
..|+|||||++|+|.+++.. ..+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 91 ~~~ivmEy~~gg~L~~~~~~----~~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a 163 (293)
T d1yhwa1 91 ELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (293)
T ss_dssp EEEEEEECCTTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEEECCCCCHHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHEEECCCCCEEECCCHHH
T ss_conf 98999970379808988641----599999999999999999999998---79722677688868878996864251564
Q ss_pred CCCC---------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 8888---------8877764452002799999866433036999998839999888842014788888541187642213
Q 004637 609 LPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 609 ~~~~---------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
+... .++..+++||... ...++.++||||+||++|||+||+.||.+.........+........ ..
T Consensus 164 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~-~~--- 238 (293)
T d1yhwa1 164 AQITPEQSKRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL-QN--- 238 (293)
T ss_dssp EECCSTTCCBCCCCSCGGGCCHHHHS-SSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC-SS---
T ss_pred EEECCCCCCCCCCCCCCCCCCHHHHC-CCCCCCHHCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC-CC---
T ss_conf 13213666444444477736826644-79988012031372999998048899899799999999985799988-88---
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 69322387828899999999976246698989998999999
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
+.....++.+++.+||+.||++||++.|++++
T Consensus 239 ---------~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 239 ---------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (293)
T ss_dssp ---------GGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred ---------CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf ---------55379999999999866996689099999649
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=348.29 Aligned_cols=245 Identities=18% Similarity=0.267 Sum_probs=196.6
Q ss_pred HCCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCC
Q ss_conf 44999999232078740899883-49989999995312455736899999998601686411131033530358999997
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 528 (740)
.+.|++.+.||+|+||.||+|+. .+++.||+|+++.......+.+.+|++++++++|||||++++++. +..
T Consensus 11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~--------~~~ 82 (288)
T d2jfla1 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY--------YEN 82 (288)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEE--------ETT
T ss_pred CCCEEEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE--------ECC
T ss_conf 037598479930778199999999999399999987289999999999999998679999884988980--------099
Q ss_pred CEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCCC
Q ss_conf 26999842457640011012367887899999999999999999987199998020388899511149992447058998
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~ 608 (740)
..++|||||++|+|.+++.. ....+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 83 ~~~lvmEy~~~g~L~~~~~~--~~~~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a 157 (288)
T d2jfla1 83 NLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVS 157 (288)
T ss_dssp EEEEEEECCTTEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEECCCCCCHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEEEECCHHHEEECCCCCEEEEECHHH
T ss_conf 58999962799818899986--28999999999999999999999998---89887140700314878999899716123
Q ss_pred CC---------CCCCCCCCCCCCCCC----CCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 88---------888877764452002----79999986643303699999883999988884201478888854118764
Q 004637 609 LP---------SKKGLESPLRGQYVS----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 609 ~~---------~~~~~~~~~~~e~~~----~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
.. ...++..+++||... ....|+.++|||||||++|||+||+.||.+.........+.. ..+..
T Consensus 158 ~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~---~~~~~ 234 (288)
T d2jfla1 158 AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK---SEPPT 234 (288)
T ss_dssp EECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHH---SCCCC
T ss_pred HCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC---CCCCC
T ss_conf 035778641001025626479999832025788888066578789999998208899999899999999970---79987
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 221369322387828899999999976246698989998999999
Q 004637 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 ~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
+. .+.....++.+++.+||+.||++|||+.|++++
T Consensus 235 ~~----------~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 235 LA----------QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp CS----------SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CC----------CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 77----------656699999999999766996689199999629
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=350.56 Aligned_cols=245 Identities=16% Similarity=0.274 Sum_probs=190.5
Q ss_pred CCCCCCC-EEECCCCCCEEEEEEC---CCCEEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCC
Q ss_conf 4999999-2320787408998834---99899999953124-55736899999998601686411131033530358999
Q 004637 451 NNFDPTN-LIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~-~lG~G~~g~Vyk~~~~---~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 525 (740)
++|...+ .||+|+||.||+|..+ ++..||||+++... ....+.|.+|++++++++|||||+++|+|..
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------- 80 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------- 80 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-------
T ss_pred CCEEECCCEEECCCCEEEEEEEEECCCCCEEEEEEEECHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC-------
T ss_conf 4718878487306080999999960897689999998820397899999999999986799888068656036-------
Q ss_pred CCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECC
Q ss_conf 99726999842457640011012367887899999999999999999987199998020388899511149992447058
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 605 (740)
...++|||||++|+|.+++.. ....+++..+..++.|+|.||.|||+ .+|+||||||+|||++.++.+||+||
T Consensus 81 --~~~~lvmE~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DF 153 (285)
T d1u59a_ 81 --EALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDF 153 (285)
T ss_dssp --SSEEEEEECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCC
T ss_pred --CEEEEEEEECCCCCHHHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEECCCCCEEECCC
T ss_conf --807999980789968997521--25699999999999999998789986---88105767646604546885420331
Q ss_pred CCCCCCCC------------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 99888888------------87776445200279999986643303699999883-999988884201478888854118
Q 004637 606 NIPLPSKK------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 606 Gl~~~~~~------------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
|+++.... ++..+++||... ...++.++|||||||++|||+| |+.||.+.....+...+......
T Consensus 154 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~- 231 (285)
T d1u59a_ 154 GLSKALGADDSYYTARSAGKWPLKWYAPECIN-FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM- 231 (285)
T ss_dssp TTCEECTTCSCEECCCCSSCCCGGGCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC-
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH-CCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC-
T ss_conf 34211554343211356211374335868872-7999954123220178999993899999997999999999818999-
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 76422136932238782889999999997624669898999899999956534
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSI 725 (740)
Q Consensus 673 ~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 725 (740)
.. +..++.++.+|+.+||+.||++||+|.+|++.|+..-
T Consensus 232 --~~------------p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 232 --EC------------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp --CC------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CC------------CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
T ss_conf --99------------9767899999999975779768909999999999999
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=347.62 Aligned_cols=255 Identities=18% Similarity=0.308 Sum_probs=197.1
Q ss_pred CCCCCCCEEECCCCCCEEEEEECCC-----CEEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCC
Q ss_conf 4999999232078740899883499-----899999953124-5573689999999860168641113103353035899
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDG-----SRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~~~g-----~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 524 (740)
+.|+..++||+|+||.||+|.++.. ..||||+++... .....+|.+|++++++++|||||+++|+|.
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~------- 79 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS------- 79 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-------
T ss_pred HHEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE-------
T ss_conf 9968615981177909999999689987879999999884459689999999999998568987832367783-------
Q ss_pred CCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEEC
Q ss_conf 99972699984245764001101236788789999999999999999998719999802038889951114999244705
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~D 604 (740)
.....++|||||.+|++.+++.. ....++|..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|
T Consensus 80 -~~~~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~D 153 (283)
T d1mqba_ 80 -KYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSD 153 (283)
T ss_dssp -SSSSEEEEEECCTTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECC
T ss_pred -CCCCEEEEEEECCCCCCHHHHHC--CCCCCCHHHHHHHHHHHHHHHHHCCC---CCCCCCCCCCCEEEECCCCEEEECC
T ss_conf -38803899972135740222102--34542089999999999985412121---2342576564427888998499845
Q ss_pred CCCCCCCCC------------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCC-CCCCCHHHHHHHHHHHC
Q ss_conf 899888888------------87776445200279999986643303699999883999988-88420147888885411
Q 004637 605 YNIPLPSKK------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKS-TSEVDGLKLQLETCLAE 671 (740)
Q Consensus 605 FGl~~~~~~------------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~-~~~~~~~~~~~~~~~~~ 671 (740)
||+++.... ++..+++||... ...++.++|||||||++|||+||..|+. ......+...+...
T Consensus 154 FGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~--- 229 (283)
T d1mqba_ 154 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS-YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG--- 229 (283)
T ss_dssp CCC-----------------CCCGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT---
T ss_pred CCHHHCCCCCCCCCEEECCCCCCCCCCCHHHHC-CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC---
T ss_conf 510300357876526742677773434888870-4999973556344898999996798865568999999998635---
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 876422136932238782889999999997624669898999899999956534202455578
Q 004637 672 APSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQEGWTSS 734 (740)
Q Consensus 672 ~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~ 734 (740)
. . ...+.+++.++.+++.+||+.||++||+|.||++.|+.+.+.+|...+.
T Consensus 230 ~--------~----~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p~~l~~l 280 (283)
T d1mqba_ 230 F--------R----LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTL 280 (283)
T ss_dssp C--------C----CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGGGSB
T ss_pred C--------C----CCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 7--------8----9985045799999999977679768939999999999986695646332
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=345.69 Aligned_cols=244 Identities=17% Similarity=0.278 Sum_probs=196.5
Q ss_pred CCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCCCE
Q ss_conf 49999992320787408998834998999999531245573689999999860168641113103353035899999726
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 530 (740)
++|+..+.||+|+||.||+|+.++++.||||+++... ...++|.+|++++++++||||++++|+|. +....
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~--------~~~~~ 74 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT--------KQRPI 74 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEEC--------CSSSE
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCC-CCHHHHHHHHHHHHHCCCCCEEEEEEEEE--------ECCCE
T ss_conf 9979968982078839999998899899999987475-77899999999999668986015889985--------07816
Q ss_pred EEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf 99984245764001101236788789999999999999999998719999802038889951114999244705899888
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~~~ 610 (740)
++||||+++|+|.+++.. ....+++..+.+++.|+|+||.|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 75 ~iv~Ey~~~g~l~~~~~~--~~~~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~ 149 (258)
T d1k2pa_ 75 FIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY 149 (258)
T ss_dssp EEEEECCTTEEHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCB
T ss_pred EEEEECCCCCCHHHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCEEEEECCCCCEEECCCHHHEE
T ss_conf 999970489938886410--24677689999999999999998754---6843466541358876998479886144202
Q ss_pred CCC----------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 888----------87776445200279999986643303699999883-9999888842014788888541187642213
Q 004637 611 SKK----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 611 ~~~----------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
... ++..+.+||... ...++.++|||||||++|||+| |+.||.......+...+......
T Consensus 150 ~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~-------- 220 (258)
T d1k2pa_ 150 VLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL-------- 220 (258)
T ss_dssp CSSSSCCCCCCSCCCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCC--------
T ss_pred CCCCCCEEECCCCCCCCCCCCHHHC-CCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC--------
T ss_conf 3578722524657887757807863-7998852103364324673975599998899999999999807978--------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 693223878288999999999762466989899989999995653
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 680 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 724 (740)
..| .....++.+++.+||+.||++||||+|++++|.++
T Consensus 221 ~~p-------~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 221 YRP-------HLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp CCC-------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred CCC-------CCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCC
T ss_conf 996-------54659999999997668976893999999874188
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=347.85 Aligned_cols=255 Identities=17% Similarity=0.304 Sum_probs=194.5
Q ss_pred HHCCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCC
Q ss_conf 844999999232078740899883-499899999953124-557368999999986016864111310335303589999
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 449 ~~~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 526 (740)
..++|++.+.||+|+||+||+|+. .+|+.||+|+++... ......+.+|+++++.++|||||+++++|. +
T Consensus 4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--------~ 75 (322)
T d1s9ja_ 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY--------S 75 (322)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEE--------C
T ss_pred CCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE--------E
T ss_conf 75688897897127780999999989996999999875409789999999999998679999994999999--------8
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCC
Q ss_conf 97269998424576400110123678878999999999999999999871999980203888995111499924470589
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 606 (740)
...+++|||||++|+|.+++.. ...+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||
T Consensus 76 ~~~~~iVmEy~~gg~L~~~l~~---~~~l~~~~~~~~~~qil~aL~yLH~~--~~IiHRDiKP~NILl~~~~~vkl~DFG 150 (322)
T d1s9ja_ 76 DGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFG 150 (322)
T ss_dssp SSEEEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCC
T ss_pred CCEEEEEEECCCCCCHHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHHH--CCEECCCCCHHHEEECCCCCEEEEECC
T ss_conf 9999999976799868998742---49999999999999999999999985--999714457799468789989995487
Q ss_pred CCCC-------CCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC---
Q ss_conf 9888-------888877764452002799999866433036999998839999888842014788888541187642---
Q 004637 607 IPLP-------SKKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL--- 676 (740)
Q Consensus 607 l~~~-------~~~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 676 (740)
+|+. ...++..+++||... ...|+.++||||+||++|||+||+.||.+.+...............+...
T Consensus 151 la~~~~~~~~~~~~GT~~Y~APEvl~-~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (322)
T d1s9ja_ 151 VSGQLIDSMANSFVGTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPR 229 (322)
T ss_dssp CCHHHHHHTC---CCSSCCCCHHHHH-CSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC--------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHC-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 76256788621113771411946875-89989488899899999999988899899887899999988751775457742
Q ss_pred ----------------------------CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf ----------------------------21369322387828899999999976246698989998999999
Q 004637 677 ----------------------------RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 677 ----------------------------~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
.....+.+.. .....++.+++.+|+..||.+|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 230 PRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPS---GVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp ----------------CCCCHHHHHHHHHTSCCCCCCB---TTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC---CCCCHHHHHHHHHHCCCCHHHCCCHHHHHHC
T ss_conf 12333221111222354134778876650268766764---4489999999999868994679089999609
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=347.38 Aligned_cols=243 Identities=20% Similarity=0.262 Sum_probs=191.6
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCC
Q ss_conf 4999999232078740899883-499899999953124-55736899999998601686411131033530358999997
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|++++++++|||||++++++. ++.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~--------~~~ 76 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR--------EGN 76 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEE--------ETT
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEC--------CCC
T ss_conf 460899897217480999999999997999999845664127999999999998579988846965404--------674
Q ss_pred CEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCCC
Q ss_conf 26999842457640011012367887899999999999999999987199998020388899511149992447058998
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~ 608 (740)
..++|||||++|+|.+++. ....+++.....++.|++.||.|||+ .+|+||||||+|||+++++.+||+|||++
T Consensus 77 ~~~ivmEy~~gg~L~~~l~---~~~~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a 150 (271)
T d1nvra_ 77 IQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 150 (271)
T ss_dssp EEEEEEECCTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEECCCCCCHHHHHH---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHEEECCCCCEEECCCHHH
T ss_conf 3679886458980899975---37999999999999999999999997---59835754689978878998798323142
Q ss_pred CCC-----------CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 888-----------888777644520027999998664330369999988399998888420147888885411876422
Q 004637 609 LPS-----------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLR 677 (740)
Q Consensus 609 ~~~-----------~~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (740)
+.. ..++..+++||.......++.++||||+||++|||+||+.||.................... ..
T Consensus 151 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~-~~- 228 (271)
T d1nvra_ 151 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NP- 228 (271)
T ss_dssp EECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTS-TT-
T ss_pred EEECCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC-CC-
T ss_conf 2404688653111325574742872861899999710161737999999829978888985999999986388878-86-
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 1369322387828899999999976246698989998999999
Q 004637 678 AEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 678 ~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
......++.+++.+||+.||++|||++|++++
T Consensus 229 -----------~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 260 (271)
T d1nvra_ 229 -----------WKKIDSAPLALLHKILVENPSARITIPDIKKD 260 (271)
T ss_dssp -----------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----------CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf -----------44699999999999767996689099999619
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=347.54 Aligned_cols=247 Identities=19% Similarity=0.338 Sum_probs=192.1
Q ss_pred HHCCCCCCCEEECCCCCCEEEEEECC-C-----CEEEEEEEECC-CCCCHHHHHHHHHHHHHC-CCCCCCEEECEEEEEC
Q ss_conf 84499999923207874089988349-9-----89999995312-455736899999998601-6864111310335303
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLTD-G-----SRVSVKCLKLK-QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (740)
Q Consensus 449 ~~~~f~~~~~lG~G~~g~Vyk~~~~~-g-----~~vavK~l~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~ 520 (740)
..++|+..++||+|+||.||+|+... + ..||+|.+... .......+.+|+.++.++ +|||||+++|+|.
T Consensus 35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~--- 111 (325)
T d1rjba_ 35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT--- 111 (325)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred CHHHEEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE---
T ss_conf 78993970198307881999999857885542049999996633587899999999999997158996868778886---
Q ss_pred CCCCCCCCCEEEEEECCCCCCHHHHCCCCCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 5899999726999842457640011012367--------------------88789999999999999999998719999
Q 004637 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKK--------------------KDMLKWPQRMAIIIGATRGVQFLHTGVAP 580 (740)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 580 (740)
.....++|||||++|+|.++++..+. ...++|..++.++.|++.||+|||+ .
T Consensus 112 -----~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~ 183 (325)
T d1rjba_ 112 -----LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---K 183 (325)
T ss_dssp -----SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---T
T ss_pred -----ECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---C
T ss_conf -----29958999972799959999986257775102210000122200125778999999999999999999973---9
Q ss_pred CCEECCCCCCCEEECCCCCEEEECCCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH-
Q ss_conf 802038889951114999244705899888888-----------87776445200279999986643303699999883-
Q 004637 581 GIFGNNLKTENILLDKALTAKLSGYNIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT- 648 (740)
Q Consensus 581 ~iiHrDlk~~NILld~~~~~kl~DFGl~~~~~~-----------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~Ellt- 648 (740)
+|+||||||+|||++.++.+||+|||+++.... ++..+++||... ...++.++|||||||++|||+|
T Consensus 184 ~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~~DiwS~Gvil~emlt~ 262 (325)
T d1rjba_ 184 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF-EGIYTIKSDVWSYGILLWEIFSL 262 (325)
T ss_dssp TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHTTT
T ss_pred CEEECCCCHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHC-CCCCCCCEECCCHHHHHHHHHHC
T ss_conf 90505270321443459828985142222045778615623435787657838872-79999633030003999999838
Q ss_pred CCCCCCCCCCCHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9999888842014-7888885411876422136932238782889999999997624669898999899999956
Q 004637 649 GKQVKSTSEVDGL-KLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 649 G~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~ 722 (740)
|+.||.+...... ...+..... .+.+..+..++.+|+.+||+.||++||||+||+++|.
T Consensus 263 g~~Pf~~~~~~~~~~~~~~~~~~---------------~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 263 GVNPYPGIPVDANFYKLIQNGFK---------------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp SCCSSTTCCCSHHHHHHHHTTCC---------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCCCC---------------CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 99999998989999999856998---------------9988767899999999975889668939999999974
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=0 Score=344.92 Aligned_cols=245 Identities=17% Similarity=0.240 Sum_probs=194.6
Q ss_pred HCCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCC
Q ss_conf 44999999232078740899883-49989999995312455736899999998601686411131033530358999997
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 528 (740)
.++|++.+.||+|+||.||+|+. .+|+.||||+++.........+.+|++++++++|||||++++++. ++.
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~--------~~~ 99 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE--------DKY 99 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE--------CSS
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE--------ECC
T ss_conf 403599899931778299999998999799999988726467999999999998679979891999999--------899
Q ss_pred CEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEC--CCCCEEEECCC
Q ss_conf 2699984245764001101236788789999999999999999998719999802038889951114--99924470589
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD--KALTAKLSGYN 606 (740)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld--~~~~~kl~DFG 606 (740)
.+|+|||||++|+|.+++.. ....+++.....++.|++.||.|||+ .+|+||||||+|||++ .++.+||+|||
T Consensus 100 ~~~ivmE~~~gg~L~~~~~~--~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFG 174 (352)
T d1koba_ 100 EMVLILEFLSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFG 174 (352)
T ss_dssp EEEEEEECCCCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEEEECCCCCHHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 99999982899808888986--38998999999999999999999997---79265131445531134678848995256
Q ss_pred CCCCCCC--------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 9888888--------87776445200279999986643303699999883999988884201478888854118764221
Q 004637 607 IPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 607 l~~~~~~--------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
++..... ++..+++||... ...++.++||||+||++|||+||+.||.+.........+.......+.....
T Consensus 175 la~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 253 (352)
T d1koba_ 175 LATKLNPDEIVKVTTATAEFAAPEIVD-REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFS 253 (352)
T ss_dssp TCEECCTTSCEEEECSSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTT
T ss_pred CCEECCCCCCEEECCCCCCCCCHHHHC-CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 303437887201004764534899974-7998976333898999999996889989979999999998478898930024
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 369322387828899999999976246698989998999999
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 679 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
....++.+|+.+||+.||.+|||+.|++++
T Consensus 254 ------------~~s~~~~~li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 254 ------------SVSPEAKDFIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp ------------TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ------------CCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf ------------799999999999756996689189999609
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=349.13 Aligned_cols=257 Identities=19% Similarity=0.264 Sum_probs=199.7
Q ss_pred HHHHHHHHCCCCCCCEEECCCCCCEEEEEEC------CCCEEEEEEEECCCC-CCHHHHHHHHHHHHHCCCCCCCEEECE
Q ss_conf 9899998449999992320787408998834------998999999531245-573689999999860168641113103
Q 004637 443 LEEIEEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGH 515 (740)
Q Consensus 443 ~~~l~~~~~~f~~~~~lG~G~~g~Vyk~~~~------~g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~ 515 (740)
+.+++.+.++|+..+.||+|+||.||+|+.+ +++.||||+++.... ...++|.+|+++++.++||||++++++
T Consensus 5 ~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~ 84 (301)
T d1lufa_ 5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV 84 (301)
T ss_dssp HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred HHHCCCCHHHCEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE
T ss_conf 33113898893886798207883999999888765778829999998821085799999999999996689976552466
Q ss_pred EEEECCCCCCCCCCEEEEEECCCCCCHHHHCCCCC---------------------CCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 35303589999972699984245764001101236---------------------788789999999999999999998
Q 004637 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK---------------------KKDMLKWPQRMAIIIGATRGVQFL 574 (740)
Q Consensus 516 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~gL~yL 574 (740)
|. .....+++|||+++|+|.+++.... ....++|..++.|+.|++.||+||
T Consensus 85 ~~--------~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yl 156 (301)
T d1lufa_ 85 CA--------VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL 156 (301)
T ss_dssp EC--------SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred EC--------CCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 60--------5980389998158992999998527554210000111001210346788989999999999999985541
Q ss_pred HCCCCCCCEECCCCCCCEEECCCCCEEEECCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHH
Q ss_conf 71999980203888995111499924470589988888-----------8877764452002799999866433036999
Q 004637 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK-----------KGLESPLRGQYVSNQPGDGAKEDVYQLGVIL 643 (740)
Q Consensus 575 H~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~~~~~-----------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil 643 (740)
|. .+|+||||||+|||+|.++.+||+|||+++... .++..+++||... ...++.++|||||||++
T Consensus 157 H~---~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~t~ksDVwS~Gvvl 232 (301)
T d1lufa_ 157 SE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVL 232 (301)
T ss_dssp HH---TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH-HCCCCHHHHHHHHHHHH
T ss_pred CC---CCEEEEEECCCCEEECCCCCEEECCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHHC-CCCCCHHHHHCCCHHHH
T ss_conf 35---786854884011689899928983314421136776411157777676767989972-68898056302523629
Q ss_pred HHHHHCC-CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9988399-998888420147888885411876422136932238782889999999997624669898999899999956
Q 004637 644 LQVITGK-QVKSTSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 644 ~ElltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~ 722 (740)
|||+||. +||......++...+.... .... +..++.++.+|+.+||+.||++||||.||+++|+
T Consensus 233 ~ell~~~~~p~~~~~~~e~~~~v~~~~---~~~~------------p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~ 297 (301)
T d1lufa_ 233 WEIFSYGLQPYYGMAHEEVIYYVRDGN---ILAC------------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 297 (301)
T ss_dssp HHHHTTTCCTTTTSCHHHHHHHHHTTC---CCCC------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHCCC---CCCC------------CCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 999806899999989999999997399---7888------------7325299999999974889657939999999999
Q ss_pred HHHH
Q ss_conf 5342
Q 004637 723 YSIQ 726 (740)
Q Consensus 723 ~~~~ 726 (740)
.+++
T Consensus 298 ~i~~ 301 (301)
T d1lufa_ 298 RMCE 301 (301)
T ss_dssp HTTC
T ss_pred HHCC
T ss_conf 8429
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=348.26 Aligned_cols=250 Identities=20% Similarity=0.306 Sum_probs=196.3
Q ss_pred HCCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCCC
Q ss_conf 44999999232078740899883499899999953124557368999999986016864111310335303589999972
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 529 (740)
.++|++.+.||+|+||.||+|+.++++.||||+++.. ....+.|.+|+.++++++|+|||+++|+|. ...
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~---------~~~ 85 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS---------EEP 85 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC---------SSS
T ss_pred HHHEEEEEEEEECCCEEEEEEEECCCCEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCEEEEEEEEE---------CCC
T ss_conf 7997984699307980999999999999999998804-488899999999998666678868999982---------397
Q ss_pred EEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 69998424576400110123678878999999999999999999871999980203888995111499924470589988
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~~ 609 (740)
.++|||||++|+|.+++... ....++|..++.++.++|.||.|||. .+|+||||||+|||+|.++.+||+|||+++
T Consensus 86 ~~lv~Ey~~~g~l~~~~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~ 161 (285)
T d1fmka3 86 IYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR 161 (285)
T ss_dssp CEEEECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred EEEEEEECCCCCHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHH---HHEECCCCCCEEEEECCCCCEEECCCCHHH
T ss_conf 59999944799435420000-35530599999999999999998754---114335312307999899929984425554
Q ss_pred CCCC----------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 8888----------877764452002799999866433036999998839999888-84201478888854118764221
Q 004637 610 PSKK----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKST-SEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 610 ~~~~----------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
.... ++..+++||+.. ...++.++|||||||++|||+||..|+.. .....+...+..... ....
T Consensus 162 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~---~~~~- 236 (285)
T d1fmka3 162 LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR---MPCP- 236 (285)
T ss_dssp --------------CCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC---CCCC-
T ss_pred HCCCCCCEEECCCCCCCCCCCHHHHH-CCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC---CCCC-
T ss_conf 25688733524545566545808983-799891774132358999998689999988889999999982689---9998-
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 369322387828899999999976246698989998999999565342024
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQE 729 (740)
Q Consensus 679 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (740)
..+..++.+++.+||+.||++||+|++|+++|+......+
T Consensus 237 -----------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~ 276 (285)
T d1fmka3 237 -----------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 276 (285)
T ss_dssp -----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred -----------CCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCC
T ss_conf -----------3237999999999756697589199999998766623899
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=0 Score=344.56 Aligned_cols=245 Identities=16% Similarity=0.233 Sum_probs=195.1
Q ss_pred HCCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCC
Q ss_conf 44999999232078740899883-49989999995312455736899999998601686411131033530358999997
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 528 (740)
.++|++.+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++|||||++++++. +..
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~--------~~~ 96 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE--------DDN 96 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEE--------ETT
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE--------ECC
T ss_conf 657589889840768199999988999899999984524316999999999998679979992999999--------899
Q ss_pred CEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEC--CCCCEEEECCC
Q ss_conf 2699984245764001101236788789999999999999999998719999802038889951114--99924470589
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD--KALTAKLSGYN 606 (740)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld--~~~~~kl~DFG 606 (740)
..++|||||++|+|.+++.. ....+++.....++.|++.||.|||+ .+|+||||||+|||++ .++.+||+|||
T Consensus 97 ~~~ivmE~~~gg~L~~~l~~--~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG 171 (350)
T d1koaa2 97 EMVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFG 171 (350)
T ss_dssp EEEEEECCCCSCBHHHHHTC--TTSCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCT
T ss_pred EEEEEEECCCCCCHHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHH---CCCEEEEECHHHEEECCCCCCEEEEEECC
T ss_conf 99999985799889999976--23789999999999999999999975---69760001546736416889869995452
Q ss_pred CCCCCC--------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 988888--------887776445200279999986643303699999883999988884201478888854118764221
Q 004637 607 IPLPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 607 l~~~~~--------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
+++... .++..+++||... ...++.++||||+||++|||+||+.||.+.........+.......+....
T Consensus 172 ~a~~~~~~~~~~~~~gT~~Y~aPEv~~-~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~- 249 (350)
T d1koaa2 172 LTAHLDPKQSVKVTTGTAEFAAPEVAE-GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF- 249 (350)
T ss_dssp TCEECCTTSCEEEECSCTTTCCHHHHH-TCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGG-
T ss_pred HHEECCCCCCCCEECCCCCCCCHHHHC-CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCC-
T ss_conf 104425654320006862421889975-899872676554659999998598998997999999999847889894223-
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 369322387828899999999976246698989998999999
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 679 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
.....++.+++.+||..||++|||+.|++++
T Consensus 250 -----------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 250 -----------SGISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp -----------GGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred -----------CCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf -----------5899999999999756896679089998629
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=344.45 Aligned_cols=239 Identities=18% Similarity=0.296 Sum_probs=193.4
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECC---CCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCC
Q ss_conf 4999999232078740899883-49989999995312---4557368999999986016864111310335303589999
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||.||+|+. .+++.||+|++... .......+.+|+++++.++|||||++++++. +
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~--------~ 77 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH--------D 77 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------C
T ss_pred HHEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE--------E
T ss_conf 37699889851778589999998999499999981688567689999999999998568888885999999--------8
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCC
Q ss_conf 97269998424576400110123678878999999999999999999871999980203888995111499924470589
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 606 (740)
....++|||||++|+|.+++.. ...+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 78 ~~~~~ivmEy~~~g~L~~~l~~---~~~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG 151 (263)
T d2j4za1 78 ATRVYLILEYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFG 151 (263)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCEEEEEEEECCCCCHHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEEEEECCCCCEECCCCCEEECCCC
T ss_conf 9998999850479858988750---4899999999999999999999998---894652202344146689987115556
Q ss_pred CCCCCCC-------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 9888888-------877764452002799999866433036999998839999888842014788888541187642213
Q 004637 607 IPLPSKK-------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 607 l~~~~~~-------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
+++.... ++..+++||... ...++.++|||||||++|||+||+.||.+.........+... . ..+.+.
T Consensus 152 ~a~~~~~~~~~~~~Gt~~Y~APE~~~-~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~---~-~~~p~~ 226 (263)
T d2j4za1 152 WSVHAPSSRRTTLCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---E-FTFPDF 226 (263)
T ss_dssp SCSCCCCCCCEETTEEGGGCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT---C-CCCCTT
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHHC-CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC---C-CCCCCC
T ss_conf 33544888523557887634999975-899893144046759999983299998889999999999718---9-999866
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 69322387828899999999976246698989998999999
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
+ ..++.+++.+||+.||++|||+.|+++.
T Consensus 227 ~------------s~~~~~li~~~L~~dp~~R~t~~eil~h 255 (263)
T d2j4za1 227 V------------TEGARDLISRLLKHNPSQRPMLREVLEH 255 (263)
T ss_dssp S------------CHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred C------------CHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 8------------9999999999764797689099999719
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=343.50 Aligned_cols=237 Identities=20% Similarity=0.314 Sum_probs=186.9
Q ss_pred CEEECCCCCCEEEEEECC---CCEEEEEEEECCC--CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCCCEE
Q ss_conf 923207874089988349---9899999953124--55736899999998601686411131033530358999997269
Q 004637 457 NLIGEGSQGQLYKGFLTD---GSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 457 ~~lG~G~~g~Vyk~~~~~---g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
+.||+|+||.||+|.+++ ++.||||+++... ....+.+.+|++++++++|||||+++|+|.. ...+
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~---------~~~~ 83 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA---------ESWM 83 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES---------SSEE
T ss_pred CCCCCCCCEEEEEEEECCCCCCEEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC---------CCEE
T ss_conf 7834587829999998169738599999988010898999999999999986799898527777505---------9779
Q ss_pred EEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCCCCCC
Q ss_conf 99842457640011012367887899999999999999999987199998020388899511149992447058998888
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (740)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~~~~ 611 (740)
+|||||++|+|.++++. ...++|..++.++.|+|+||.|||+ .+|+||||||+|||++.++.+|++|||+++..
T Consensus 84 lvmE~~~~g~L~~~l~~---~~~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~ 157 (277)
T d1xbba_ 84 LVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 157 (277)
T ss_dssp EEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEECCCCCCHHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHC
T ss_conf 99974788968999752---2578999999999999999766874---79556777611310235675123413453313
Q ss_pred CC------------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 88------------87776445200279999986643303699999883-999988884201478888854118764221
Q 004637 612 KK------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 612 ~~------------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
.. ++..+++||... ...++.++|||||||++|||+| |+.||.+.....+...+... .....
T Consensus 158 ~~~~~~~~~~~~~~gt~~y~APE~l~-~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~---~~~~~-- 231 (277)
T d1xbba_ 158 RADENYYKAQTHGKWPVKWYAPECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG---ERMGC-- 231 (277)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT---CCCCC--
T ss_pred CCCCCCCCCCCCCCCCCEECCCHHHC-CCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC---CCCCC--
T ss_conf 43234432244567784203916653-7999843443034031328965899999998999999999828---99999--
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 3693223878288999999999762466989899989999995653
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 679 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 724 (740)
+..++.++.+|+.+||+.||++||+|.+|++.|+..
T Consensus 232 ----------p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 232 ----------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp ----------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ----------CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCH
T ss_conf ----------865679999999997588976890989999985288
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=344.83 Aligned_cols=248 Identities=21% Similarity=0.341 Sum_probs=198.1
Q ss_pred CCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCCCE
Q ss_conf 49999992320787408998834998999999531245573689999999860168641113103353035899999726
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 530 (740)
++|+..+.||+|+||.||+|+.+ |..||||+++.. ...+.+.+|++++++++||||++++|+|.. ....+
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-------~~~~~ 76 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVE-------EKGGL 76 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECC-------C--CC
T ss_pred HHEEEEEEEECCCCEEEEEEEEC-CEEEEEEEECCH--HHHHHHHHHHHHHHHCCCCCEEEEEEEEEE-------CCCCE
T ss_conf 99488579820798089999999-909999998857--779999999999986789898549878872-------38928
Q ss_pred EEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf 99984245764001101236788789999999999999999998719999802038889951114999244705899888
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~~~ 610 (740)
++||||+++|+|.+++... ....++|..+++++.|++.||.|||+ .+|+||||||+||+++.++.+|++|||+++.
T Consensus 77 ~lv~ey~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~ 152 (262)
T d1byga_ 77 YIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 152 (262)
T ss_dssp EEEECCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred EEEEECCCCCCHHHHHHHC-CCCCCCHHHHHHHHHHHHHHCCCCCC---CCEECCCCCHHHHEECCCCCEEECCCCCCEE
T ss_conf 9999636999899998745-78888999999999999852321133---7655366656760146899776324560034
Q ss_pred CCC------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 888------87776445200279999986643303699999883-99998888420147888885411876422136932
Q 004637 611 SKK------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAPSKLRAEADPS 683 (740)
Q Consensus 611 ~~~------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 683 (740)
... ++..+++||+.. ...++.++|||||||++|||+| |+.|+.......+...+.... .+.
T Consensus 153 ~~~~~~~~~~~~~y~aPE~l~-~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~-----------~~~ 220 (262)
T d1byga_ 153 ASSTQDTGKLPVKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-----------KMD 220 (262)
T ss_dssp ---------CCTTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC-----------CCC
T ss_pred CCCCCCCCCCCCCCCCHHHHH-CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC-----------CCC
T ss_conf 478776556664677817872-79888588777579999999978999999999999999998089-----------999
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 238782889999999997624669898999899999956534202
Q 004637 684 VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQ 728 (740)
Q Consensus 684 l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (740)
+ +.....++.+++.+||+.||.+||||.|++++|+.++.-+
T Consensus 221 ~----~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~~ 261 (262)
T d1byga_ 221 A----PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 261 (262)
T ss_dssp C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred C----CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCC
T ss_conf 9----7657999999999975669768939999999999998677
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=341.73 Aligned_cols=246 Identities=19% Similarity=0.326 Sum_probs=195.1
Q ss_pred CCCCCCCEEECCCCCCEEEEEEC-CCC----EEEEEEEECC-CCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCC
Q ss_conf 49999992320787408998834-998----9999995312-45573689999999860168641113103353035899
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT-DGS----RVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~~-~g~----~vavK~l~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 524 (740)
++|++.++||+|+||.||+|+.. +|+ .||+|+++.. ..+..+.+.+|++++++++|||||+++|+|..
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~------ 82 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 82 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES------
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC------
T ss_conf 99978319820899299999995899889899999996513497999999999999986799888158999961------
Q ss_pred CCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEEC
Q ss_conf 99972699984245764001101236788789999999999999999998719999802038889951114999244705
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~D 604 (740)
...++++||+.+|+|.+++.. ....+++..++.++.|+|.||.|||+ .+|+||||||+|||++.++.+||+|
T Consensus 83 ---~~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~D 154 (317)
T d1xkka_ 83 ---STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITD 154 (317)
T ss_dssp ---SSEEEEEECCTTCBHHHHHHH--TSSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECC
T ss_pred ---CCEEEEEEECCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCHHHCCEECCCCCEEEEC
T ss_conf ---983699984268740101113--34579999999999999999999987---6950476212031167998758602
Q ss_pred CCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 89988888-----------887776445200279999986643303699999883-999988884201478888854118
Q 004637 605 YNIPLPSK-----------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 605 FGl~~~~~-----------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
||+++... .++..+++||... ...++.++|||||||++|||+| |+.||.+.....+...+......
T Consensus 155 FGla~~~~~~~~~~~~~~~~gt~~y~APE~l~-~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~- 232 (317)
T d1xkka_ 155 FGLAKLLGAEEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL- 232 (317)
T ss_dssp CSHHHHTTTTCC--------CCTTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCC-
T ss_pred CCCCEECCCCCCCCCCCCCCCCCCCCCHHHHH-CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC-
T ss_conf 55222335444532236510586446708874-6999835654407999999997799999999989999999759989-
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 764221369322387828899999999976246698989998999999565342
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 673 ~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
.. +..+..++.+++.+||+.||.+||+|.||++.|+.+.+
T Consensus 233 --~~------------p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~ 272 (317)
T d1xkka_ 233 --PQ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272 (317)
T ss_dssp --CC------------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CC------------CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf --99------------85568999999998478993469199999999999875
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=342.32 Aligned_cols=242 Identities=21% Similarity=0.271 Sum_probs=189.6
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCCC---CHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCC
Q ss_conf 4999999232078740899883-49989999995312455---7368999999986016864111310335303589999
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 526 (740)
+.|+..+.||+|+||.||+|+. .+++.||||+++..... ..+.+.+|++++++++|||||++++++..
T Consensus 15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-------- 86 (309)
T d1u5ra_ 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------- 86 (309)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--------
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE--------
T ss_conf 856762797018880999999989993999999844443588999999999999997789998238999998--------
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCC
Q ss_conf 97269998424576400110123678878999999999999999999871999980203888995111499924470589
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 606 (740)
....++|||||++|+|..++. ....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 87 ~~~~~iv~E~~~~g~l~~~~~---~~~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG 160 (309)
T d1u5ra_ 87 EHTAWLVMEYCLGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFG 160 (309)
T ss_dssp TTEEEEEEECCSEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred CCEEEEEEEECCCCCHHHHHH---HCCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCCCEEEECCCCCEEEEECC
T ss_conf 998899998069994578997---37999999999999999999999986---897666788421798799978984436
Q ss_pred CCCCCC-----CCCCCCCCCCCCCC--CCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 988888-----88777644520027--99999866433036999998839999888842014788888541187642213
Q 004637 607 IPLPSK-----KGLESPLRGQYVSN--QPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAE 679 (740)
Q Consensus 607 l~~~~~-----~~~~~~~~~e~~~~--~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (740)
++.... .++..+++||.... ...|+.++|||||||++|||+||+.||.+.........+.. ...+
T Consensus 161 ~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~--~~~~------ 232 (309)
T d1u5ra_ 161 SASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NESP------ 232 (309)
T ss_dssp TCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--SCCC------
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH--CCCC------
T ss_conf 53346778731347663688998346788867214545589999999878899999799999999982--8999------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 69322387828899999999976246698989998999999
Q 004637 680 ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
.+.. .....++.+++.+||+.||++|||+.|++++
T Consensus 233 ---~~~~---~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H 267 (309)
T d1u5ra_ 233 ---ALQS---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (309)
T ss_dssp ---CCSC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ---CCCC---CCCCHHHHHHHHHHCCCCHHHCCCHHHHHHC
T ss_conf ---8887---8889999999999773796579189999719
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=340.81 Aligned_cols=245 Identities=20% Similarity=0.286 Sum_probs=194.4
Q ss_pred HHCCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCC
Q ss_conf 844999999232078740899883-499899999953124-557368999999986016864111310335303589999
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 449 ~~~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 526 (740)
..+.|+..+.||+|+||.||+|+. .+++.||||++.... ......+.+|+++++.++|||||++++++. +
T Consensus 7 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--------~ 78 (307)
T d1a06a_ 7 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYE--------S 78 (307)
T ss_dssp GGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEE--------C
T ss_pred CCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE--------E
T ss_conf 76666998899406583999999999998999999815773128999999999998679989991989999--------8
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEC---CCCCEEEE
Q ss_conf 972699984245764001101236788789999999999999999998719999802038889951114---99924470
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD---KALTAKLS 603 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld---~~~~~kl~ 603 (740)
+...|+|||||++|+|.+++.. ...+++.....++.|++.||.|||+ .+|+||||||+||++. +++.+||+
T Consensus 79 ~~~~~lvmE~~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~ 152 (307)
T d1a06a_ 79 GGHLYLIMQLVSGGELFDRIVE---KGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMIS 152 (307)
T ss_dssp SSEEEEEECCCCSCBHHHHHHT---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEEC
T ss_pred CCEEEEEEECCCCCCHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---CEEEEEEECCCCEEECCCCCCCEEEEE
T ss_conf 9988898852689848886530---3678878999999999999875241---305568704630011046888249983
Q ss_pred CCCCCCCCC--------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 589988888--------887776445200279999986643303699999883999988884201478888854118764
Q 004637 604 GYNIPLPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 604 DFGl~~~~~--------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
|||+++... .++..+++||... ...++.++||||+||++|||+||+.||.+.........+.......+
T Consensus 153 DFG~a~~~~~~~~~~~~~GT~~y~APE~~~-~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~-- 229 (307)
T d1a06a_ 153 DFGLSKMEDPGSVLSTACGTPGYVAPEVLA-QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD-- 229 (307)
T ss_dssp CC------------------CTTSCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCC--
T ss_pred CCCEEEECCCCCEEEEEEECCCCCCCHHHC-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC--
T ss_conf 154358725897044003284225918873-79998078734515999999859799999899999999861687778--
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 221369322387828899999999976246698989998999999
Q 004637 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 ~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
.....+...++.+++.+|++.||++|||+.|++++
T Consensus 230 ----------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 230 ----------SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp ----------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ----------CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf ----------76666789999999999760897579189998629
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=346.31 Aligned_cols=248 Identities=21% Similarity=0.265 Sum_probs=193.9
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCC--CCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCC
Q ss_conf 4999999232078740899883-4998999999531245--573689999999860168641113103353035899999
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 527 (740)
++|++.+.||+|+||.||+|+. .+|+.||+|+++.... ...+.+.+|++++++++|||||++++++... ..
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------~~ 77 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR------TN 77 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC---------
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC------CC
T ss_conf 337996798308891999999999997999999874657979999999999999977899982489999917------89
Q ss_pred CCEEEEEECCCCCCHHHHCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHCCC--CCCCEECCCCCCCEEECCCCCEEEEC
Q ss_conf 7269998424576400110123-67887899999999999999999987199--99802038889951114999244705
Q 004637 528 STVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGV--APGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlk~~NILld~~~~~kl~D 604 (740)
..+|+|||||++|+|.+++... .....+++..+..++.|++.||.|||+.. ..+|+||||||+|||++.++.+||+|
T Consensus 78 ~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~D 157 (269)
T d2java1 78 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD 157 (269)
T ss_dssp -CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECC
T ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCCCEEEEE
T ss_conf 98999995689993899998515457899999999999999999999997167788788586765425747888579800
Q ss_pred CCCCCCC---------CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 8998888---------8887776445200279999986643303699999883999988884201478888854118764
Q 004637 605 YNIPLPS---------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 605 FGl~~~~---------~~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
||+++.. ..++..+++||... ...++.++|||||||++|||+||+.||.+.+...+...+... ....
T Consensus 158 FG~a~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~---~~~~ 233 (269)
T d2java1 158 FGLARILNHDTSFAKAFVGTPYYMSPEQMN-RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG---KFRR 233 (269)
T ss_dssp HHHHHHC-----------CCCSCCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT---CCCC
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCHHHHC-CCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHCC---CCCC
T ss_conf 100032245777556677882327999983-999993898875278999980188998998999999999718---9988
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 221369322387828899999999976246698989998999999
Q 004637 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 ~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
+... ...++.+++.+||+.||++||++.|++++
T Consensus 234 ~~~~------------~s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 234 IPYR------------YSDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp CCTT------------SCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCC------------CCHHHHHHHHHHCCCCHHHCCCHHHHHHC
T ss_conf 9743------------59999999999767995579189999729
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=337.86 Aligned_cols=244 Identities=18% Similarity=0.303 Sum_probs=187.9
Q ss_pred CCEEECCCCCCEEEEEECCC----CEEEEEEEECC-CCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCCCE
Q ss_conf 99232078740899883499----89999995312-45573689999999860168641113103353035899999726
Q 004637 456 TNLIGEGSQGQLYKGFLTDG----SRVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 456 ~~~lG~G~~g~Vyk~~~~~g----~~vavK~l~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 530 (740)
.++||+|+||+||+|++.++ ..||||+++.. .....+.|.+|++++++++||||++++|+|.. .+...
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-------~~~~~ 104 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR-------SEGSP 104 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEE-------TTTEE
T ss_pred CEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE-------CCCCE
T ss_conf 66981368809999999779987999999998843697899999999999986789998678678980-------69943
Q ss_pred EEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf 99984245764001101236788789999999999999999998719999802038889951114999244705899888
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (740)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~~~ 610 (740)
++|||||++|+|.++++. ....+++..++.++.|+|.||.|+|+ ++|+||||||+|||+|+++.+||+|||+++.
T Consensus 105 ~lv~E~~~~g~l~~~~~~--~~~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~ 179 (311)
T d1r0pa_ 105 LVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARD 179 (311)
T ss_dssp EEEEECCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCC
T ss_pred EEEEEEEECCCHHHHHCC--CCCCCHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCCHHHEEECCCCCEEEECCCCHHH
T ss_conf 899987406741442101--34540489999999998876520033---6762577668757677999889910652322
Q ss_pred CCCC-------------CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCC-CCCHHHHHHHHHHHCCCCCC
Q ss_conf 8888-------------777644520027999998664330369999988399998888-42014788888541187642
Q 004637 611 SKKG-------------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTS-EVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 611 ~~~~-------------~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~-~~~~~~~~~~~~~~~~~~~~ 676 (740)
.... +..+.+||... ...++.++||||||+++|||+||+.|+... ...+....+... .....
T Consensus 180 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g---~~~~~ 255 (311)
T d1r0pa_ 180 MYDKEFDSVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---RRLLQ 255 (311)
T ss_dssp TTTTTCCCTTCTTCSSCCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTT---CCCCC
T ss_pred CCCCCCCCCEECCCCCCCCCCCCHHHHH-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC---CCCCC
T ss_conf 5566555310025655564556768874-3799974574661999999997899998889999999999808---98899
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 213693223878288999999999762466989899989999995653420
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQV 727 (740)
Q Consensus 677 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 727 (740)
. ..+..++.+++.+||+.||++||+|.||++.|+.+.+.
T Consensus 256 p------------~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 256 P------------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp C------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred C------------CCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHH
T ss_conf 6------------44759999999997688976893999999999999975
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=339.47 Aligned_cols=252 Identities=19% Similarity=0.324 Sum_probs=195.3
Q ss_pred CCCCCCCEEECCCCCCEEEEEECC-CC--EEEEEEEECC-CCCCHHHHHHHHHHHHHC-CCCCCCEEECEEEEECCCCCC
Q ss_conf 499999923207874089988349-98--9999995312-455736899999998601-686411131033530358999
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTD-GS--RVSVKCLKLK-QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~~~-g~--~vavK~l~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 525 (740)
++|+..++||+|+||.||+|+..+ +. .||||+++.. .....+.+.+|++++.++ +|||||+++|+|..
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~------- 82 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH------- 82 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-------
T ss_pred HHCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC-------
T ss_conf 9968877982078828999999899969999999978233857999999999999862289988367888841-------
Q ss_pred CCCCEEEEEECCCCCCHHHHCCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCE
Q ss_conf 997269998424576400110123-------------6788789999999999999999998719999802038889951
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDW-------------KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (740)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NI 592 (740)
....++||||+++|+|.++++.. .....++|..+.+++.|+|+||.|+|+ .+|+||||||+||
T Consensus 83 -~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NI 158 (309)
T d1fvra_ 83 -RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNI 158 (309)
T ss_dssp -TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGE
T ss_pred -CCEEEEEEEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCCCEE
T ss_conf -873699998028986999986403555551231012345789999999999999999876630---8954555052048
Q ss_pred EECCCCCEEEECCCCCCCCC--------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCC-CCCCCCCCCHHHH
Q ss_conf 11499924470589988888--------88777644520027999998664330369999988399-9988884201478
Q 004637 593 LLDKALTAKLSGYNIPLPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGK-QVKSTSEVDGLKL 663 (740)
Q Consensus 593 Lld~~~~~kl~DFGl~~~~~--------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~-~p~~~~~~~~~~~ 663 (740)
|++.++.+||+|||+++... .++..+.+||... ...++.++|||||||++|||+||. .||...+...+..
T Consensus 159 L~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~ 237 (309)
T d1fvra_ 159 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 237 (309)
T ss_dssp EECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred EECCCCCEEECCCCCCCCCCCCCCCCCEECCCCCCCHHHHC-CCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf 98688763874344322444223455301377555538752-69999622153138899999836899999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 888854118764221369322387828899999999976246698989998999999565342024
Q 004637 664 QLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQE 729 (740)
Q Consensus 664 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 729 (740)
.+... . .+. .+.....++.+++.+||+.||++||+|.||++.|+.+.+.+.
T Consensus 238 ~i~~~---~--------~~~----~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~ 288 (309)
T d1fvra_ 238 KLPQG---Y--------RLE----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 288 (309)
T ss_dssp HGGGT---C--------CCC----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred HHHHC---C--------CCC----CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCC
T ss_conf 99826---8--------888----876678999999999767896689499999999999986186
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=335.71 Aligned_cols=245 Identities=20% Similarity=0.275 Sum_probs=192.2
Q ss_pred HCCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCC------CCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCC
Q ss_conf 44999999232078740899883-4998999999531245------5736899999998601686411131033530358
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR------HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 522 (740)
.+.|++.+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|++++++++|||||++++++.
T Consensus 9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~----- 83 (293)
T d1jksa_ 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE----- 83 (293)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE-----
T ss_conf 567798279811789599999999999899999987566321340689999999999998679989993889999-----
Q ss_pred CCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCC----
Q ss_conf 9999972699984245764001101236788789999999999999999998719999802038889951114999----
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL---- 598 (740)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~---- 598 (740)
+....++|||||++|+|.+++.. ...+++.....++.|++.||.|||+ .+|+||||||+|||++.++
T Consensus 84 ---~~~~~~iv~E~~~gg~L~~~i~~---~~~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~ 154 (293)
T d1jksa_ 84 ---NKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKP 154 (293)
T ss_dssp ---CSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSC
T ss_pred ---ECCEEEEEEECCCCCCCCCHHCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCCCCCEEEEECCCCCCC
T ss_conf ---79989999986778643100103---5642155789999999999876662---54221133301279825898666
Q ss_pred CEEEECCCCCCCCC--------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 24470589988888--------8877764452002799999866433036999998839999888842014788888541
Q 004637 599 TAKLSGYNIPLPSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 599 ~~kl~DFGl~~~~~--------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 670 (740)
.+|++|||++.... .++..+++||... ...++.++|||||||++|||+||+.||.+.........+.....
T Consensus 155 ~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~-~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~ 233 (293)
T d1jksa_ 155 RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 233 (293)
T ss_dssp CEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC
T ss_pred CEEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHHC-CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 46964334421057776312247777430999981-89999766522140999999708899889999999999981688
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf 187642213693223878288999999999762466989899989999995
Q 004637 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 671 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 721 (740)
..+... ......++.+++.+||..||++|||+.|++++-
T Consensus 234 ~~~~~~------------~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 272 (293)
T d1jksa_ 234 EFEDEY------------FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272 (293)
T ss_dssp CCCHHH------------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred CCCCHH------------CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCC
T ss_conf 887010------------478899999999998638966891999996190
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=335.22 Aligned_cols=244 Identities=17% Similarity=0.232 Sum_probs=189.2
Q ss_pred HCCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCC---CCCHHHHHHH---HHHHHHCCCCCCCEEECEEEEECCC
Q ss_conf 44999999232078740899883-499899999953124---5573689999---9998601686411131033530358
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQH---VELLSKLRHRHLVSILGHCILTYQD 522 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~---~~~~~~~~~e---~~~l~~l~H~niv~l~g~~~~~~~~ 522 (740)
.++|++.++||+|+||.||+|+. .+|+.||+|++.... ......+.+| +++++.++|||||++++++.
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~----- 77 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH----- 77 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE-----
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE-----
T ss_conf 776851018842889099999999999799999984587542667999999999999985089985889999999-----
Q ss_pred CCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEE
Q ss_conf 99999726999842457640011012367887899999999999999999987199998020388899511149992447
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (740)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl 602 (740)
....+|+|||||++|+|.+++.. ...+++.....++.+++.||.|||+ .+|+||||||+|||++.++.+||
T Consensus 78 ---~~~~~~ivmE~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl 148 (364)
T d1omwa3 78 ---TPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRI 148 (364)
T ss_dssp ---CSSEEEEEECCCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEE
T ss_pred ---ECCEEEEEEEECCCCCHHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCEEECCCEEEECCCCCEEE
T ss_conf ---89988999991489838999873---2553278999999999999999997---79622044422167858896798
Q ss_pred ECCCCCCCCC-------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 0589988888-------887776445200279999986643303699999883999988884201478888854118764
Q 004637 603 SGYNIPLPSK-------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 603 ~DFGl~~~~~-------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
+|||+++... .++..+++||.......++.++||||+||++|||+||+.||............... ...+..
T Consensus 149 ~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~-~~~~~~ 227 (364)
T d1omwa3 149 SDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT-LTMAVE 227 (364)
T ss_dssp CCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHS-SSCCCC
T ss_pred EEECEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC-CCCCCC
T ss_conf 2201023337886433113455421687603899984410467789999998599988889989999999860-468887
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC-----HHHHHHH
Q ss_conf 22136932238782889999999997624669898999-----8999999
Q 004637 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS-----IEDVLWN 720 (740)
Q Consensus 676 ~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~evl~~ 720 (740)
....++ .++.+++.+||+.||++||+ ++|++++
T Consensus 228 ~~~~~s------------~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 228 LPDSFS------------PELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp CCSSSC------------HHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred CCCCCC------------HHHHHHHHHHCCCCHHHHCCCCCCCHHHHHCC
T ss_conf 887789------------99999999985669888088743579999749
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=336.94 Aligned_cols=240 Identities=23% Similarity=0.314 Sum_probs=185.4
Q ss_pred CCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCC--CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCCCEE
Q ss_conf 999232078740899883-499899999953124--55736899999998601686411131033530358999997269
Q 004637 455 PTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (740)
Q Consensus 455 ~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~~ 531 (740)
..+.||+|+||+||+|+. .+++.||+|++.... ....+.+.+|++++++++|||||++++++.... .....++
T Consensus 13 ~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~----~~~~~~~ 88 (270)
T d1t4ha_ 13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV----KGKKCIV 88 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES----SSCEEEE
T ss_pred EEEEEECCCCCEEEEEEECCCCEEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC----CCCCEEE
T ss_conf 516970082849999999999959999998512279899999999999998579998506999984033----4588899
Q ss_pred EEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC--CEECCCCCCCEEEC-CCCCEEEECCCCC
Q ss_conf 99842457640011012367887899999999999999999987199998--02038889951114-9992447058998
Q 004637 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG--IFGNNLKTENILLD-KALTAKLSGYNIP 608 (740)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlk~~NILld-~~~~~kl~DFGl~ 608 (740)
+|||||++|+|.+++.. ...+++.....++.|+++||+|||+ .+ |+||||||+|||++ +++.+||+|||++
T Consensus 89 ivmE~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla 162 (270)
T d1t4ha_ 89 LVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 162 (270)
T ss_dssp EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEECCCCCCHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEECCCCHHHCEEECCCCCEEEEECCCC
T ss_conf 99957898948999751---3554699999999999999999997---89979968767435116679998898005765
Q ss_pred CCCC-------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCC-HHHHHHHHHHHCCCCCCCCCC
Q ss_conf 8888-------88777644520027999998664330369999988399998888420-147888885411876422136
Q 004637 609 LPSK-------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVD-GLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 609 ~~~~-------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 680 (740)
+... .++..+++||... ..++.++|||||||++|||+||+.||.+.... .+...+... ..+.......
T Consensus 163 ~~~~~~~~~~~~GT~~Y~aPE~~~--~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~--~~~~~~~~~~ 238 (270)
T d1t4ha_ 163 TLKRASFAKAVIGTPEFMAPEMYE--EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG--VKPASFDKVA 238 (270)
T ss_dssp GGCCTTSBEESCSSCCCCCGGGGG--TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT--CCCGGGGGCC
T ss_pred EECCCCCCCCCCCCCCCCCHHHHC--CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC--CCCCCCCCCC
T ss_conf 423687667755381300898847--899986711007999999987889998765599999999738--9986567557
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 9322387828899999999976246698989998999999
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 681 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
..++.+++.+||+.||++|||+.|++++
T Consensus 239 ------------~~~~~~li~~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 239 ------------IPEVKEIIEGCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp ------------CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ------------CHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf ------------8999999999763797589299999677
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=339.31 Aligned_cols=239 Identities=17% Similarity=0.251 Sum_probs=192.4
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECC---CCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCC
Q ss_conf 4999999232078740899883-49989999995312---4557368999999986016864111310335303589999
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||.||+|+. .+++.||||+++.. .....+.+.+|++++++++||||+++++++. +
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~--------~ 79 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ--------D 79 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEE--------C
T ss_pred CCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE--------E
T ss_conf 87789889850879099999998999799999986577557778999999999998768888617999999--------8
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCC
Q ss_conf 97269998424576400110123678878999999999999999999871999980203888995111499924470589
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 606 (740)
....|+|||||++|+|.+++.. .+.+++.....++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 80 ~~~~~ivmEy~~gg~L~~~~~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG 153 (288)
T d1uu3a_ 80 DEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFG 153 (288)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEECCCCCCHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHCC---CCEECCCCCCCCCCCCCCCEEEECCCC
T ss_conf 9988999970489877776531---5999999999999999999976216---508847677412366888538860321
Q ss_pred CCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 988888-----------887776445200279999986643303699999883999988884201478888854118764
Q 004637 607 IPLPSK-----------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 607 l~~~~~-----------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
+++... .++..+++||... ...++.++||||+||++|||+||+.||.+.+...+...+... .+ .
T Consensus 154 ~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~-~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~---~~-~ 228 (288)
T d1uu3a_ 154 TAKVLSPESKQARANSFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---EY-D 228 (288)
T ss_dssp TCEECC----------CCCCGGGCCHHHHH-TCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT---CC-C
T ss_pred CCEECCCCCCCCCCCCCCCCCCCCCCEEEC-CCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC---CC-C
T ss_conf 024225677643335556775525844002-689896662304569999980388998995999999999718---99-9
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 221369322387828899999999976246698989998999999
Q 004637 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 ~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
+...+ ..++.+++.+||+.||++|||++|+++.
T Consensus 229 ~p~~~------------s~~~~~li~~~L~~dP~~R~t~~e~~~~ 261 (288)
T d1uu3a_ 229 FPEKF------------FPKARDLVEKLLVLDATKRLGCEEMEGY 261 (288)
T ss_dssp CCTTC------------CHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred CCCCC------------CHHHHHHHHHHCCCCHHHCCCHHHHCCC
T ss_conf 98547------------9999999999855797689197897377
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=336.14 Aligned_cols=260 Identities=19% Similarity=0.305 Sum_probs=195.3
Q ss_pred CHHHHHHHHCCCCCCCEEECCCCCCEEEEEEC------CCCEEEEEEEECCC-CCCHHHHHHHHHHHHHC-CCCCCCEEE
Q ss_conf 99899998449999992320787408998834------99899999953124-55736899999998601-686411131
Q 004637 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSIL 513 (740)
Q Consensus 442 ~~~~l~~~~~~f~~~~~lG~G~~g~Vyk~~~~------~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~ 513 (740)
+.++++...++|+..+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|...+.++ +|+||+.++
T Consensus 4 ~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~ 83 (299)
T d1ywna1 4 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 83 (299)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCCCCCCCHHHEEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 98252616799798449841678399999986777555783999999860017178999999999988614998499741
Q ss_pred CEEEEECCCCCCCCCCEEEEEECCCCCCHHHHCCCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 03353035899999726999842457640011012367-------------88789999999999999999998719999
Q 004637 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAP 580 (740)
Q Consensus 514 g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 580 (740)
+++.. .+..+++|||||++|+|.++++.... ...+++..+..++.|+++||.|||+ .
T Consensus 84 ~~~~~-------~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~ 153 (299)
T d1ywna1 84 GACTK-------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---R 153 (299)
T ss_dssp EEECS-------TTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH---T
T ss_pred EEECC-------CCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH---C
T ss_conf 15404-------7975799998458992999998536666653222023321468999999999999999998873---7
Q ss_pred CCEECCCCCCCEEECCCCCEEEECCCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHC
Q ss_conf 802038889951114999244705899888888-----------877764452002799999866433036999998839
Q 004637 581 GIFGNNLKTENILLDKALTAKLSGYNIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITG 649 (740)
Q Consensus 581 ~iiHrDlk~~NILld~~~~~kl~DFGl~~~~~~-----------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG 649 (740)
+|+||||||+|||++.++.+||+|||+++.... ++..+++||... ...++.++|||||||++|||+||
T Consensus 154 ~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~-~~~~~~~sDiwS~Gvil~ellt~ 232 (299)
T d1ywna1 154 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSL 232 (299)
T ss_dssp TCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCEEECCCCCEEECCCCCHHHCCCCCCCCCCCCEEECCCCCCHHHHH-CCCCCCCCCEEEHHHHHHHHHHC
T ss_conf 97178677310657799828984575200113566522247516672102036864-68899663221367899999868
Q ss_pred C-CCCCCCCCCHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 9-99888842014-788888541187642213693223878288999999999762466989899989999995653420
Q 004637 650 K-QVKSTSEVDGL-KLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQV 727 (740)
Q Consensus 650 ~-~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 727 (740)
. .||........ ...+... ......+ ....++.+++.+||+.||++||||.||+++|+.+.|.
T Consensus 233 ~~~p~~~~~~~~~~~~~~~~~---~~~~~~~------------~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~ 297 (299)
T d1ywna1 233 GASPYPGVKIDEEFCRRLKEG---TRMRAPD------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 297 (299)
T ss_dssp SCCSSTTCCCSHHHHHHHHHT---CCCCCCT------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCC---CCCCCCC------------CCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHC
T ss_conf 899998999899999999638---9888886------------5789999999997677966791999999999799867
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=339.21 Aligned_cols=249 Identities=16% Similarity=0.265 Sum_probs=194.5
Q ss_pred HCCCCCCCEEECCCCCCEEEEEECC----CCEEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCC
Q ss_conf 4499999923207874089988349----9899999953124-5573689999999860168641113103353035899
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~~~----g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 524 (740)
.++|++.+.||+|+||.||+|+... +..||||.++... ....+.+.+|++++++++|||||+++|+|.
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------- 78 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------- 78 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-------
T ss_pred HHHEEEEEEEEECCCCEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE-------
T ss_conf 8996987799307882999999936996449999999365668799999999999998689999856988995-------
Q ss_pred CCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEEC
Q ss_conf 99972699984245764001101236788789999999999999999998719999802038889951114999244705
Q 004637 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (740)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~D 604 (740)
....++|||||++|+|.+++.. ....+++..+..++.|+++||.|||+ .+|+||||||+||+++.++.+|++|
T Consensus 79 --~~~~~iv~E~~~~g~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~D 151 (273)
T d1mp8a_ 79 --ENPVWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGD 151 (273)
T ss_dssp --SSSCEEEEECCTTEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC
T ss_pred --CCEEEEEEEECCCCCHHHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHCC---CCEECCCCCHHHEEECCCCCEEECC
T ss_conf --3747999984069807765422--47899999999999999877523022---6744141026553206789678765
Q ss_pred CCCCCCCCC----------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 899888888----------87776445200279999986643303699999883-9999888842014788888541187
Q 004637 605 YNIPLPSKK----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLAEAP 673 (740)
Q Consensus 605 FGl~~~~~~----------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 673 (740)
||+++.... ++..+++||... ...++.++|||||||++|||+| |++||.......+...+......
T Consensus 152 fG~a~~~~~~~~~~~~~~~gt~~y~apE~l~-~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~-- 228 (273)
T d1mp8a_ 152 FGLSRYMEDSTYYKASKGKLPIKWMAPESIN-FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL-- 228 (273)
T ss_dssp -------------------CCGGGCCHHHHH-HCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC--
T ss_pred CHHHEECCCCCCEECCCEECCCCCCHHHHHC-CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC--
T ss_conf 0342133677623305400583103266751-6998874524442478999982699998889999999999818999--
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 6422136932238782889999999997624669898999899999956534202
Q 004637 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQ 728 (740)
Q Consensus 674 ~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (740)
... ...+.++.+++.+||..||++|||+.||++.|+.+.+-+
T Consensus 229 -~~~------------~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~ 270 (273)
T d1mp8a_ 229 -PMP------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 270 (273)
T ss_dssp -CCC------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CCC------------CCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHH
T ss_conf -898------------777999999999976879768929999999999997786
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=332.06 Aligned_cols=240 Identities=18% Similarity=0.234 Sum_probs=193.6
Q ss_pred HCCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECC---CCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCC
Q ss_conf 44999999232078740899883-49989999995312---455736899999998601686411131033530358999
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 525 (740)
.++|++.++||+|+||.||+|+. .+++.||+|+++.. .....+.+.+|++++++++||||+++++++.
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-------- 75 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-------- 75 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE--------
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC--------
T ss_conf 474289889831768499999998999899999981565449799999999999998679998877876403--------
Q ss_pred CCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECC
Q ss_conf 99726999842457640011012367887899999999999999999987199998020388899511149992447058
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 605 (740)
+...+|+|||||++|+|.+++.. ...+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+||
T Consensus 76 ~~~~~~iv~ey~~gg~L~~~~~~---~~~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DF 149 (337)
T d1o6la_ 76 THDRLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred CCCCCCCCEECCCCCCHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHEEECCCCCEEEEEC
T ss_conf 56421110003579860555532---5677599999999999652113431---59622464777847658998888205
Q ss_pred CCCCCCCC---------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 99888888---------877764452002799999866433036999998839999888842014788888541187642
Q 004637 606 NIPLPSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 606 Gl~~~~~~---------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|+++.... ++..+++||... ...|+.++||||+||++|||+||+.||.+.+...+...+...... .
T Consensus 150 G~a~~~~~~~~~~~~~~GT~~Y~aPE~~~-~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~----~ 224 (337)
T d1o6la_ 150 GLCKEGISDGATMKTFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR----F 224 (337)
T ss_dssp TTCBCSCCTTCCBCCCEECGGGCCGGGGS-SSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC----C
T ss_pred CCCCCCCCCCCCCCCCEECHHHHHHHHCC-CCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC----C
T ss_conf 65200356786205510088996666504-898883331022306788998789999996999999998528998----9
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC-----HHHHHHH
Q ss_conf 2136932238782889999999997624669898999-----8999999
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS-----IEDVLWN 720 (740)
Q Consensus 677 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~evl~~ 720 (740)
...+ ..++.+++.+|++.||.+||+ +.|++++
T Consensus 225 p~~~------------s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 225 PRTL------------SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp CTTS------------CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCC------------CHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHCC
T ss_conf 8668------------999999998666389344225652349999729
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=337.88 Aligned_cols=260 Identities=19% Similarity=0.317 Sum_probs=190.2
Q ss_pred CCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHH--HHHHHHHCCCCCCCEEECEEEEECCCCCCCCC
Q ss_conf 4999999232078740899883499899999953124557368999--99998601686411131033530358999997
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQ--HVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~~~g~~vavK~l~~~~~~~~~~~~~--e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 528 (740)
++|...+.||+|+||.||+|++ +|+.||||+++... ...+.. |+..+..++|||||+++|+|..... ...
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~----~~~ 74 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNG----TWT 74 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS----SSE
T ss_pred CEEEEEEEEEECCCEEEEEEEE-CCEEEEEEEECCCC---HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC----CCE
T ss_conf 6899988982078819999999-99899999987200---467999999999962799868326889983798----604
Q ss_pred CEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-----CCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 26999842457640011012367887899999999999999999987199-----9980203888995111499924470
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV-----APGIFGNNLKTENILLDKALTAKLS 603 (740)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~iiHrDlk~~NILld~~~~~kl~ 603 (740)
.+++|||||++|+|.++++. ..++|..+++++.++|.||+|+|+.. .++|+||||||+|||++.++.+||+
T Consensus 75 ~~~lv~Ey~~~g~L~~~l~~----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~ 150 (303)
T d1vjya_ 75 QLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEEECCCCCCHHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEECCCCCEEEE
T ss_conf 89999964669898999865----89998999999999999999988766520468986615317313578688776887
Q ss_pred CCCCCCCCC-------------CCCCCCCCCCCCCCCC-----CCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHH----
Q ss_conf 589988888-------------8877764452002799-----999866433036999998839999888842014----
Q 004637 604 GYNIPLPSK-------------KGLESPLRGQYVSNQP-----GDGAKEDVYQLGVILLQVITGKQVKSTSEVDGL---- 661 (740)
Q Consensus 604 DFGl~~~~~-------------~~~~~~~~~e~~~~~~-----~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~---- 661 (740)
|||++.... .++..+++||+..... .++.++|||||||++|||+||..|+........
T Consensus 151 DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~ 230 (303)
T d1vjya_ 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT
T ss_pred ECCCCCCCCCCCCCEECCCCCEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 63866234677762001355250354767822105654546777675012201599999996289988766311241012
Q ss_pred -------HHHHHHHHHCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf -------788888541187642213693223878-2889999999997624669898999899999956534202
Q 004637 662 -------KLQLETCLAEAPSKLRAEADPSVRGTY-AYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQVQ 728 (740)
Q Consensus 662 -------~~~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 728 (740)
........ .....+|.+.... ..+....+.+++.+||+.||++||||.||+++|+.+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~------~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~ 299 (303)
T d1vjya_ 231 LVPSDPSVEEMRKVV------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp TSCSSCCHHHHHHHH------TTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH------HCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHC
T ss_conf 255643099999987------502468887765577689999999999976069858959999999999888865
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=330.04 Aligned_cols=239 Identities=18% Similarity=0.252 Sum_probs=193.1
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECC---CCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCC
Q ss_conf 4999999232078740899883-49989999995312---4557368999999986016864111310335303589999
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||.||+|+. .+|+.||||+++.. .....+.+.+|+.+++.++|||||++++++. +
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~--------~ 75 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ--------D 75 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE--------C
T ss_pred HHEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEE--------E
T ss_conf 47088889720768089999998999799999984577548899999999999998636967533035685--------2
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCC
Q ss_conf 97269998424576400110123678878999999999999999999871999980203888995111499924470589
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 606 (740)
....|+|||||++|+|..++.. ...+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 76 ~~~~~ivmE~~~gg~l~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG 149 (316)
T d1fota_ 76 AQQIFMIMDYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFG 149 (316)
T ss_dssp SSEEEEEECCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCS
T ss_pred CCEEEEEEEECCCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHHHHCC---CCEECCCCCCHHEEECCCCCEEEECCC
T ss_conf 8800567650378632234322---2211100799999999876554124---767705568105038689988983175
Q ss_pred CCCCC------CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 98888------888777644520027999998664330369999988399998888420147888885411876422136
Q 004637 607 IPLPS------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 607 l~~~~------~~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
+++.. ..++..+++||... ...++.++||||+||++|||+||+.||.+.+.......+..... .....+
T Consensus 150 ~a~~~~~~~~~~~Gt~~Y~APE~l~-~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~----~~p~~~ 224 (316)
T d1fota_ 150 FAKYVPDVTYTLCGTPDYIAPEVVS-TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL----RFPPFF 224 (316)
T ss_dssp SCEECSSCBCCCCSCTTTCCHHHHT-TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC----CCCTTS
T ss_pred CCEEECCCCCCCCCCCCCCCHHHHC-CCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC----CCCCCC
T ss_conf 2167124564345763435999983-89998043046533368999759899999699999999970898----899778
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC-----CHHHHHHH
Q ss_conf 93223878288999999999762466989899-----98999999
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 681 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~evl~~ 720 (740)
+ .++.+++.+|+..||.+|+ +++|++++
T Consensus 225 s------------~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 225 N------------EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp C------------HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred C------------HHHHHHHHHHHHHCHHHCCCCCHHHHHHHHCC
T ss_conf 9------------99999999995449976664310219999819
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=330.79 Aligned_cols=244 Identities=14% Similarity=0.161 Sum_probs=189.6
Q ss_pred HCCCCCCCEEECCCCCCEEEEEEC-CCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCC
Q ss_conf 449999992320787408998834-9989999995312455736899999998601686411131033530358999997
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~~-~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 528 (740)
.++|.+.+.||+|+||+||+|+.. +++.||+|.++.... ....+.+|+++++.++|||||++++++. +..
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~--------~~~ 74 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFE--------SME 74 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEE--------ETT
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCC-CHHHHHHHHHHHHHCCCCCCCEEEEEEE--------ECC
T ss_conf 0105887898317783999999989996999999757866-5999999999998579979890989998--------899
Q ss_pred CEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECC--CCCEEEECCC
Q ss_conf 26999842457640011012367887899999999999999999987199998020388899511149--9924470589
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK--ALTAKLSGYN 606 (740)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~--~~~~kl~DFG 606 (740)
.+|+|||||++|+|.+++.. ....+++.....++.|++.||.|||+ .+|+||||||+|||++. ...+|++|||
T Consensus 75 ~~~lvmE~~~gg~L~~~i~~--~~~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG 149 (321)
T d1tkia_ 75 ELVMIFEFISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEEEEECCCCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEEEECCCCCCHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCEEECCCCCEEEEECCCC
T ss_conf 88999953899808899875--38999999999999999999999987---69975135544434437885189976441
Q ss_pred CCCCCCC--------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 9888888--------87776445200279999986643303699999883999988884201478888854118764221
Q 004637 607 IPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRA 678 (740)
Q Consensus 607 l~~~~~~--------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (740)
++..... ++..++++|.. ....++.++||||+||++|||+||+.||...........+.......+....
T Consensus 150 ~~~~~~~~~~~~~~~~t~~y~ape~~-~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~- 227 (321)
T d1tkia_ 150 QARQLKPGDNFRLLFTAPEYYAPEVH-QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF- 227 (321)
T ss_dssp TCEECCTTCEEEEEESCGGGSCHHHH-TTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHH-
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCHHC-CCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHC-
T ss_conf 11003467753212233222340210-4877784011302799999998289999998999999999838999880223-
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 369322387828899999999976246698989998999999
Q 004637 679 EADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 679 ~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
. ....++.+++.+|+..||.+||++.|++++
T Consensus 228 -------~----~~s~~~~~li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 228 -------K----EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp -------T----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -------C----CCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf -------6----789999999999866996689099999639
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=334.45 Aligned_cols=252 Identities=15% Similarity=0.253 Sum_probs=192.8
Q ss_pred HHHCCCCCCCEEECCCCCCEEEEEEC------CCCEEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEEC
Q ss_conf 98449999992320787408998834------99899999953124-557368999999986016864111310335303
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTY 520 (740)
Q Consensus 448 ~~~~~f~~~~~lG~G~~g~Vyk~~~~------~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 520 (740)
...++|+..+.||+|+||.||+|++. ++..||||+++... .+....|.+|++++++++||||++++|+|.
T Consensus 17 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~--- 93 (308)
T d1p4oa_ 17 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS--- 93 (308)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC---
T ss_pred ECHHHEEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE---
T ss_conf 26899188359820788189999987864477896899999870128689999999999999769998841254784---
Q ss_pred CCCCCCCCCEEEEEECCCCCCHHHHCCCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEE
Q ss_conf 589999972699984245764001101236-------7887899999999999999999987199998020388899511
Q 004637 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWK-------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593 (740)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NIL 593 (740)
.....++|||||++|+|.++++..+ ....+++..+.+++.++|+||.|||. .+|+||||||+|||
T Consensus 94 -----~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiL 165 (308)
T d1p4oa_ 94 -----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 165 (308)
T ss_dssp -----SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEE
T ss_pred -----CCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECEECCCCEE
T ss_conf -----2881067776048998899987503321134446887999999999999999998764---79654328677540
Q ss_pred ECCCCCEEEECCCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCC-CCCCCCCCCHH
Q ss_conf 14999244705899888888-----------8777644520027999998664330369999988399-99888842014
Q 004637 594 LDKALTAKLSGYNIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGK-QVKSTSEVDGL 661 (740)
Q Consensus 594 ld~~~~~kl~DFGl~~~~~~-----------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~-~p~~~~~~~~~ 661 (740)
+|+++.+||+|||+++.... ++..+++||... ...++.++||||||+++|||+||. .|+.+......
T Consensus 166 ld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~-~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~ 244 (308)
T d1p4oa_ 166 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 244 (308)
T ss_dssp ECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH
T ss_pred ECCCCEEEEEECCCCEECCCCCCEEECCCEECCCCCCCHHHHC-CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHH
T ss_conf 3599649994245420235776303134023163237888873-699883334443789999999689999999899999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 78888854118764221369322387828899999999976246698989998999999565342
Q 004637 662 KLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
...+.. ....... ..+...+.+++.+||+.||++||||.+|+++|+...+
T Consensus 245 ~~~i~~---~~~~~~p------------~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 245 LRFVME---GGLLDKP------------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp HHHHHT---TCCCCCC------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHHH---CCCCCCC------------CCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCC
T ss_conf 999980---8888886------------3353999999999757796589399999999787617
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=334.19 Aligned_cols=245 Identities=18% Similarity=0.259 Sum_probs=190.1
Q ss_pred CCCCCCCEEECCCCCCEEEEEEC--CC--CEEEEEEEECCC---CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCC
Q ss_conf 49999992320787408998834--99--899999953124---557368999999986016864111310335303589
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT--DG--SRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~~--~g--~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 523 (740)
++|+..+.||+|+||.||+|+.. ++ ..||||+++... .+..++|.+|++++++++||||++++|+|..
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~----- 82 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT----- 82 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred HHEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE-----
T ss_conf 891997898038883999999988999079999999983555798999999999999986899998789877740-----
Q ss_pred CCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 99997269998424576400110123678878999999999999999999871999980203888995111499924470
Q 004637 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (740)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~ 603 (740)
...++|||||++|++.+++.. ....+++..++.++.|+|.||.|||+ .+|+||||||+||+++.++.+|++
T Consensus 83 ----~~~~lv~e~~~~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~ 153 (273)
T d1u46a_ 83 ----PPMKMVTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIG 153 (273)
T ss_dssp ----SSCEEEEECCTTCBHHHHHHH--HGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEEC
T ss_pred ----CCHHEEEEEECCCCHHHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEEEEECHHHHCCCCCCCEEEC
T ss_conf ----100114654238612544421--26899999999999999999987521---787520566888156556543325
Q ss_pred CCCCCCCCCC------------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 5899888888------------87776445200279999986643303699999883-9999888842014788888541
Q 004637 604 GYNIPLPSKK------------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 604 DFGl~~~~~~------------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 670 (740)
|||+++.... ++..+++||... ...++.++|||||||++|||+| |+.||.+.........+.....
T Consensus 154 DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~ 232 (273)
T d1u46a_ 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK-TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 232 (273)
T ss_dssp CCTTCEECCC-CCEEEC-----CCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCC
T ss_pred CCHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHH-CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 6115553035887526547632573107999983-799994215661489999999689999999699999999984799
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 187642213693223878288999999999762466989899989999995653
Q 004637 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYS 724 (740)
Q Consensus 671 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 724 (740)
. . +.+...+.++.+++.+||+.||++||||.||++.|+++
T Consensus 233 ~----~----------~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 233 R----L----------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp C----C----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C----C----------CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHC
T ss_conf 9----9----------98544539999999997688966792999999999964
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=329.39 Aligned_cols=254 Identities=18% Similarity=0.259 Sum_probs=197.3
Q ss_pred HCCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCCC---CHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCC
Q ss_conf 44999999232078740899883-49989999995312455---736899999998601686411131033530358999
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 525 (740)
.++|++.+.||+|+||.||+|+. .+++.||+|+++..... ....+.+|+++++.++||||+++++++.....
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~---- 81 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP---- 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECS----
T ss_pred CCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC----
T ss_conf 6206986899608992999999999998999999855664698999999999999985699988731143543268----
Q ss_pred CCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECC
Q ss_conf 99726999842457640011012367887899999999999999999987199998020388899511149992447058
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 605 (740)
.....|+|||||++|+|.+++.. ...+++.....++.|++.||+|||+ .+|+||||||+|||++.++..+++||
T Consensus 82 ~~~~~~lvmE~~~g~~L~~~~~~---~~~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~ 155 (277)
T d1o6ya_ 82 AGPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDF 155 (277)
T ss_dssp SSEEEEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCC
T ss_pred CCCEEEEEEECCCCCEEHHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCCCEEEHH
T ss_conf 87669999977889871011203---5899999999999999999999985---79527634675566575432010034
Q ss_pred CCCCCC------------CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 998888------------88877764452002799999866433036999998839999888842014788888541187
Q 004637 606 NIPLPS------------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673 (740)
Q Consensus 606 Gl~~~~------------~~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 673 (740)
|.+... ..++..+++||... ...++.++||||+||++|||+||+.||.+.......... ....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~-~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~---~~~~~ 231 (277)
T d1o6ya_ 156 GIARAIADSGNSVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH---VREDP 231 (277)
T ss_dssp TTCEECC----------------TTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHCCC
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHC-CCCCCCCEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHH---HHCCC
T ss_conf 44322123544333346425762436999983-999996632026528999997697998996999999999---84699
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC-CHHHHHHHHHHHHH
Q ss_conf 642213693223878288999999999762466989899-98999999565342
Q 004637 674 SKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-SIEDVLWNLQYSIQ 726 (740)
Q Consensus 674 ~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-s~~evl~~L~~~~~ 726 (740)
. ...... ...+.++.+++.+|++.||++|| +++++++.|..+.+
T Consensus 232 ~-~~~~~~--------~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n 276 (277)
T d1o6ya_ 232 I-PPSARH--------EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276 (277)
T ss_dssp C-CGGGTS--------SSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred C-CCCHHC--------CCCCHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHC
T ss_conf 9-971003--------47899999999998667976777399999999999758
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=328.90 Aligned_cols=239 Identities=17% Similarity=0.241 Sum_probs=192.2
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECC---CCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCC
Q ss_conf 4999999232078740899883-49989999995312---4557368999999986016864111310335303589999
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 526 (740)
++|++.+.||+|+||.||+|+. .+|+.||||+++.. .....+.+.+|+++++.++|||||++++++. .
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~--------~ 112 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK--------D 112 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE--------C
T ss_pred CCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCC--------C
T ss_conf 37089889611768089999998999899999982677458899999999999999748772740344443--------2
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCC
Q ss_conf 97269998424576400110123678878999999999999999999871999980203888995111499924470589
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 606 (740)
....++|+||+.+|+|.+++.. ...+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 113 ~~~~~~v~e~~~~g~l~~~l~~---~~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG 186 (350)
T d1rdqe_ 113 NSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFG 186 (350)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCCCCCCCCCCCCCCHHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHCCCCCCCCEEEEECE
T ss_conf 2222322223346622666751---5898999999999999998999985---998617679999360778978861010
Q ss_pred CCCCCCC------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 9888888------8777644520027999998664330369999988399998888420147888885411876422136
Q 004637 607 IPLPSKK------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 607 l~~~~~~------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
+++.... ++..+++||... ...++.++||||+||++|||+||+.||.+.+.......+...... ....+
T Consensus 187 ~a~~~~~~~~~~~Gt~~Y~APE~~~-~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~----~p~~~ 261 (350)
T d1rdqe_ 187 FAKRVKGRTWTLCGTPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR----FPSHF 261 (350)
T ss_dssp TCEECSSCBCCCEECGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC----CCTTC
T ss_pred EEEECCCCCCCCCCCCCCCCHHHHC-CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC----CCCCC
T ss_conf 3332256664336763567889971-799885331145007899997588998995999999998617988----97668
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC-----CHHHHHHH
Q ss_conf 93223878288999999999762466989899-----98999999
Q 004637 681 DPSVRGTYAYDSLRTTVEITINCLSKDAAKRP-----SIEDVLWN 720 (740)
Q Consensus 681 d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~evl~~ 720 (740)
..++.+++.+|+..||.+|+ ++.|++++
T Consensus 262 ------------s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H 294 (350)
T d1rdqe_ 262 ------------SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ------------CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ------------CHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHCC
T ss_conf ------------999999999983409986065534549999719
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=0 Score=328.54 Aligned_cols=244 Identities=23% Similarity=0.334 Sum_probs=190.8
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCCC---------CHHHHHHHHHHHHHCC-CCCCCEEECEEEEE
Q ss_conf 4999999232078740899883-49989999995312455---------7368999999986016-86411131033530
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---------LPQSLMQHVELLSKLR-HRHLVSILGHCILT 519 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~~---------~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~ 519 (740)
++|++.+.||+|+||+||+|+. .+++.||||+++..... ..+.+.+|+.++++++ ||||+++++++.
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 80 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE-- 80 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE--
T ss_pred CCCEECEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC--
T ss_conf 638885288417684999999999998999999962446411478889999999999999998507997479976214--
Q ss_pred CCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCC
Q ss_conf 35899999726999842457640011012367887899999999999999999987199998020388899511149992
Q 004637 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (740)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~ 599 (740)
+....|+|||||++|+|.+++.. ...+++.....++.|++.||.|||. .+|+||||||+|||++.++.
T Consensus 81 ------~~~~~~ivmE~~~~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ 148 (277)
T d1phka_ 81 ------TNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMN 148 (277)
T ss_dssp ------CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCC
T ss_pred ------CCCCEEEEEECCCCCHHHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCEEEECCCCC
T ss_conf ------67605999976898668999986---5999999999999999999999987---59943234625489868998
Q ss_pred EEEECCCCCCCCCC--------CCCCCCCCCCCC-----CCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 44705899888888--------877764452002-----79999986643303699999883999988884201478888
Q 004637 600 AKLSGYNIPLPSKK--------GLESPLRGQYVS-----NQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLE 666 (740)
Q Consensus 600 ~kl~DFGl~~~~~~--------~~~~~~~~e~~~-----~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~ 666 (740)
+||+|||++..... ++..+.+||... ....++.++||||+||++|||+||+.||.+.........+.
T Consensus 149 ~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~ 228 (277)
T d1phka_ 149 IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 228 (277)
T ss_dssp EEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred EEECCCHHEEECCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCHHEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 38712403167268872134524678889888605344567889923318565602310322888988999999999998
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 854118764221369322387828899999999976246698989998999999
Q 004637 667 TCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 667 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
......+ .........++.+++.+||+.||++||++.||+++
T Consensus 229 ~~~~~~~------------~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 229 SGNYQFG------------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp HTCCCCC------------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HCCCCCC------------CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 1898889------------85434689999999999765896689199999739
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=328.96 Aligned_cols=251 Identities=18% Similarity=0.317 Sum_probs=193.9
Q ss_pred HHCCCCCCCEEECCCCCCEEEEEECC--------CCEEEEEEEECCCC-CCHHHHHHHHHHHHHC-CCCCCCEEECEEEE
Q ss_conf 84499999923207874089988349--------98999999531245-5736899999998601-68641113103353
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFLTD--------GSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCIL 518 (740)
Q Consensus 449 ~~~~f~~~~~lG~G~~g~Vyk~~~~~--------g~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~ 518 (740)
..++|.+.+.||+|+||.||+|+... +..||||+++.... ....++.+|...+.++ +|||||+++|+|.
T Consensus 11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~- 89 (299)
T d1fgka_ 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT- 89 (299)
T ss_dssp CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred CHHHEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC-
T ss_conf 5899697009851678289999985787555667549999998811286889999999999998139996973465220-
Q ss_pred ECCCCCCCCCCEEEEEECCCCCCHHHHCCCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEC
Q ss_conf 035899999726999842457640011012367-------------8878999999999999999999871999980203
Q 004637 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGN 585 (740)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr 585 (740)
+....++|||||++|+|.+++..... ...+++..+++++.|++.||+|||+ .+|+||
T Consensus 90 -------~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~---~~ivHr 159 (299)
T d1fgka_ 90 -------QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHR 159 (299)
T ss_dssp -------SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCS
T ss_pred -------CCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEEE
T ss_conf -------1886899997369990999998606776432223345743467999999999999999987663---797863
Q ss_pred CCCCCCEEECCCCCEEEECCCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH-CCCCC
Q ss_conf 8889951114999244705899888888-----------87776445200279999986643303699999883-99998
Q 004637 586 NLKTENILLDKALTAKLSGYNIPLPSKK-----------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQVK 653 (740)
Q Consensus 586 Dlk~~NILld~~~~~kl~DFGl~~~~~~-----------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p~ 653 (740)
||||+|||++.++.+||+|||+++.... ++..+++||... ...|+.++|||||||++|||+| |+.||
T Consensus 160 DiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~-~~~y~~k~DiwS~Gvvl~ell~~g~~p~ 238 (299)
T d1fgka_ 160 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPY 238 (299)
T ss_dssp CCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred EECCCCEEECCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 022102245478976762211101135555543146678884663266751-7988825554775888887401798989
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 8884201478888854118764221369322387828899999999976246698989998999999565342
Q 004637 654 STSEVDGLKLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
.......+...+.... .+.. +.....++.+++.+||+.||++|||+.||+++|+.+..
T Consensus 239 ~~~~~~~~~~~i~~~~-----------~~~~----p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 239 PGVPVEELFKLLKEGH-----------RMDK----PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp TTCCHHHHHHHHHTTC-----------CCCC----CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCC-----------CCCC----CCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf 9999999999997288-----------8898----74352999999999766797679399999999988860
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=328.23 Aligned_cols=252 Identities=19% Similarity=0.298 Sum_probs=192.0
Q ss_pred HHHCCCCCCCEEECCCCCCEEEEEEC------CCCEEEEEEEECCC-CCCHHHHHHHHHHHHHC-CCCCCCEEECEEEEE
Q ss_conf 98449999992320787408998834------99899999953124-55736899999998601-686411131033530
Q 004637 448 EATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (740)
Q Consensus 448 ~~~~~f~~~~~lG~G~~g~Vyk~~~~------~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 519 (740)
...++|+..+.||+|+||.||+|++. +++.||||+++... ......+.+|+.+++++ +|||||+++|+|.
T Consensus 20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~-- 97 (311)
T d1t46a_ 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT-- 97 (311)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred CCHHHEEEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE--
T ss_conf 778996985498206882999999806644778869999998742487799999999999876269998878998983--
Q ss_pred CCCCCCCCCCEEEEEECCCCCCHHHHCCCCC---------------CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE
Q ss_conf 3589999972699984245764001101236---------------7887899999999999999999987199998020
Q 004637 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWK---------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFG 584 (740)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~---------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH 584 (740)
.....++|||||++|+|.++++... ....+++..+..++.|+++||.|||. .+++|
T Consensus 98 ------~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~ivH 168 (311)
T d1t46a_ 98 ------IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIH 168 (311)
T ss_dssp ------SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCC
T ss_pred ------ECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEE
T ss_conf ------199789999737998799999853566544444533222334588999999999999999998875---79266
Q ss_pred CCCCCCCEEECCCCCEEEECCCCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH-CCCC
Q ss_conf 388899511149992447058998888888-----------7776445200279999986643303699999883-9999
Q 004637 585 NNLKTENILLDKALTAKLSGYNIPLPSKKG-----------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVIT-GKQV 652 (740)
Q Consensus 585 rDlk~~NILld~~~~~kl~DFGl~~~~~~~-----------~~~~~~~e~~~~~~~~~~ksDVwSfGvil~Ellt-G~~p 652 (740)
|||||+||+++.++.+|++|||+++..... +..+++||... ...++.++|||||||++|||+| |++|
T Consensus 169 rDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DIwS~G~~l~ellt~g~p~ 247 (311)
T d1t46a_ 169 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSP 247 (311)
T ss_dssp SCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCEEEEECCCCHHHCCHHHHC-CCCCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 6241021000025752102340102336788615862013596876778861-799997400102589999998589988
Q ss_pred CCCCCCCHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 888842014-78888854118764221369322387828899999999976246698989998999999565342
Q 004637 653 KSTSEVDGL-KLQLETCLAEAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 653 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
+........ ...+...... ... .....++.+|+.+||+.||.+||+|.+|+++|+....
T Consensus 248 ~~~~~~~~~~~~~i~~~~~~---~~~------------~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~ 307 (311)
T d1t46a_ 248 YPGMPVDSKFYKMIKEGFRM---LSP------------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (311)
T ss_dssp STTCCSSHHHHHHHHHTCCC---CCC------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCCC---CCC------------CCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHC
T ss_conf 77899899999998668988---985------------4365999999999757796579299999999987653
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=326.59 Aligned_cols=251 Identities=16% Similarity=0.184 Sum_probs=189.4
Q ss_pred CCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCC-----CCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCCC
Q ss_conf 99232078740899883-4998999999531245-----57368999999986016864111310335303589999972
Q 004637 456 TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 456 ~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 529 (740)
.++||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|++++++++|||||++++++. .+..
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~--------~~~~ 74 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG--------HKSN 74 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC--------CTTC
T ss_pred CEEECCCCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC--------CCCC
T ss_conf 63851272829999999999969999998420212456799999999999998679999868985422--------5874
Q ss_pred EEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 69998424576400110123678878999999999999999999871999980203888995111499924470589988
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~~ 609 (740)
.++|||||++|++..+.. ....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 75 ~~ivmE~~~~~~~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~ 148 (299)
T d1ua2a_ 75 ISLVFDFMETDLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAK 148 (299)
T ss_dssp CEEEEECCSEEHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred EEEHHHHHCCHHHHHHHH---CCCCCCHHHHHHHHHHHHHHHHHHHC---CCEECCCCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 022045534507765541---26677899999999999999988631---635503577625885377841146576100
Q ss_pred CCCC---------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC-CCCCCC
Q ss_conf 8888---------877764452002799999866433036999998839999888842014788888541187-642213
Q 004637 610 PSKK---------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP-SKLRAE 679 (740)
Q Consensus 610 ~~~~---------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 679 (740)
.... ++..+++||.......++.++|||||||++|||+||+.||.+....+....+........ ......
T Consensus 149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~ 228 (299)
T d1ua2a_ 149 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 228 (299)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred CCCCCCCCCCCEECCHHHCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCH
T ss_conf 05787554330204733363999726778880564363042899998596999999999999999985189972545210
Q ss_pred CC------CCCCCCCC-----HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 69------32238782-----8899999999976246698989998999999
Q 004637 680 AD------PSVRGTYA-----YDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 680 ~d------~~l~~~~~-----~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
.. ........ .....++.+|+.+|++.||++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 229 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HCCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 0021344303478988678565689999999999763894569089999679
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=324.86 Aligned_cols=260 Identities=16% Similarity=0.189 Sum_probs=189.0
Q ss_pred CCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCCCE
Q ss_conf 999999232078740899883-4998999999531245573689999999860168641113103353035899999726
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (740)
Q Consensus 452 ~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~~ 530 (740)
+|+..++||+|+||+||+|+. .+|+.||||+++.... ...+|++++++++|+||+++++++...... .+..++
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~--~~~~~~ 94 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEK--KDEVYL 94 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--C--CSCCEE
T ss_pred CCEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCCCH----HHHHHHHHHHHCCCCCCCCEEEEEEECCCC--CCCEEE
T ss_conf 76751698217683999999999997999999881606----899999999866898987387899744765--773189
Q ss_pred EEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCC-CEEEECCCCCC
Q ss_conf 99984245764001101236788789999999999999999998719999802038889951114999-24470589988
Q 004637 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGYNIPL 609 (740)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~-~~kl~DFGl~~ 609 (740)
++|||||++|.+..+.........+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||++.
T Consensus 95 ~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~ 171 (350)
T d1q5ka_ 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171 (350)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCE
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCEEEEECCCCCEEEECCCCHH
T ss_conf 9998416886078888631036899999999999999999999986---6876457886037873589711673366054
Q ss_pred CCC--------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC-------
Q ss_conf 888--------88777644520027999998664330369999988399998888420147888885411876-------
Q 004637 610 PSK--------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPS------- 674 (740)
Q Consensus 610 ~~~--------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~------- 674 (740)
... .++..+++||.......++.++||||+||++|||+||+.||......+....+.........
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~ 251 (350)
T d1q5ka_ 172 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251 (350)
T ss_dssp ECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred HCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHC
T ss_conf 40477653200255555682776404688821000246527785502879989879999999999974898177654306
Q ss_pred ------CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf ------4221369322387828899999999976246698989998999999
Q 004637 675 ------KLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 675 ------~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
....................++.+|+.+|+..||++|||+.|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 303 (350)
T d1q5ka_ 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303 (350)
T ss_dssp C---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 2101103554456744443156899999999999765895579299999669
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=326.00 Aligned_cols=249 Identities=16% Similarity=0.228 Sum_probs=187.5
Q ss_pred HCCCCCC-CEEECCCCCCEEEEEE-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHC-CCCCCCEEECEEEEECCCCCCC
Q ss_conf 4499999-9232078740899883-49989999995312455736899999998601-6864111310335303589999
Q 004637 450 TNNFDPT-NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~-~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~~ 526 (740)
.++|.+. ++||+|+||.||+|+. .+++.||||+++.. ..+.+|++++.++ +|||||++++++..... .
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~----~ 80 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYA----G 80 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET----T
T ss_pred CCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCC-----HHHHHHHHHHHHHCCCCCCCEEEEEEEECCC----C
T ss_conf 148798107965454869999998899989999998974-----7799999999986699997829899950346----8
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECC---CCCEEEE
Q ss_conf 9726999842457640011012367887899999999999999999987199998020388899511149---9924470
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---ALTAKLS 603 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~---~~~~kl~ 603 (740)
...+|+|||||++|+|.+++.. +....+++.....++.|++.||.|||+ .+|+||||||+|||++. ++.+|++
T Consensus 81 ~~~~~ivmEy~~gg~L~~~i~~-~~~~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~ 156 (335)
T d2ozaa1 81 RKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 156 (335)
T ss_dssp EEEEEEEEECCCSEEHHHHHHS-CSCCCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEEC
T ss_pred CCEEEEEEECCCCCCHHHHHHH-CCCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9789999977899849999986-278775799999999999999999997---698644410022011355556631135
Q ss_pred CCCCCCCC--------CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 58998888--------8887776445200279999986643303699999883999988884201478888854118764
Q 004637 604 GYNIPLPS--------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 604 DFGl~~~~--------~~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
|||+++.. ..++..+++||... ...|+.++||||+||++|||+||+.||.+.........+.......
T Consensus 157 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~--- 232 (335)
T d2ozaa1 157 DFGFAKETTSHNSLTTPCYTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG--- 232 (335)
T ss_dssp CCTTCEECCCCCCCCCCSCCCSSCCCCCCC-GGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSC---
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCHHHC-CCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC---
T ss_conf 455123336888643226775637927774-8988888888764516778865889988988778899999998538---
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 221369322387828899999999976246698989998999999
Q 004637 676 LRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 ~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
...+..........++.+|+.+|++.||++||++.|++++
T Consensus 233 -----~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 233 -----QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp -----SSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -----CCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf -----8888985434699999999999756996579099999709
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=328.04 Aligned_cols=238 Identities=19% Similarity=0.285 Sum_probs=188.3
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECC---CCCCHHHHHHHHHHHH-HCCCCCCCEEECEEEEECCCCCC
Q ss_conf 4999999232078740899883-49989999995312---4557368999999986-01686411131033530358999
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLS-KLRHRHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~---~~~~~~~~~~e~~~l~-~l~H~niv~l~g~~~~~~~~~~~ 525 (740)
++|++.+.||+|+||+||+|+. .+++.||||+++.. .....+.+..|+.++. .++|||||++++++.
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~-------- 73 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ-------- 73 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE--------
T ss_pred CCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC--------
T ss_conf 971886589408782899999999998999999805553384899999999999998479996878988970--------
Q ss_pred CCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECC
Q ss_conf 99726999842457640011012367887899999999999999999987199998020388899511149992447058
Q 004637 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (740)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DF 605 (740)
++...|+|||||++|+|.+++.. ...+++.....++.|++.||.|||+ .+|+||||||+|||+++++.+|++||
T Consensus 74 ~~~~~yivmEy~~~g~L~~~i~~---~~~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DF 147 (320)
T d1xjda_ 74 TKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADF 147 (320)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred CCCCEEEEEEECCCCCHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCCCCCCEEECCCCCEECCCC
T ss_conf 49831677750379808998640---4789999999999999999999986---89340347654044448996301555
Q ss_pred CCCCCCC---------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 9988888---------8877764452002799999866433036999998839999888842014788888541187642
Q 004637 606 NIPLPSK---------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKL 676 (740)
Q Consensus 606 Gl~~~~~---------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 676 (740)
|+++... .++..+++||... ...++.++||||+||++|||+||+.||.+.....+...+... .+ ..
T Consensus 148 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~---~~-~~ 222 (320)
T d1xjda_ 148 GMCKENMLGDAKTNTFCGTPDYIAPEILL-GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD---NP-FY 222 (320)
T ss_dssp TTCBCCCCTTCCBCCCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC---CC-CC
T ss_pred CHHHHCCCCCCCCCCCCCCCCCCCHHHHC-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC---CC-CC
T ss_conf 30232356653345457877768999982-799883232011227898987388999998999999999718---99-89
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH-HHHH
Q ss_conf 213693223878288999999999762466989899989-9999
Q 004637 677 RAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIE-DVLW 719 (740)
Q Consensus 677 ~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~-evl~ 719 (740)
...+ ..++.+++.+||..||++||++. |+++
T Consensus 223 p~~~------------s~~~~dli~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 223 PRWL------------EKEAKDLLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp CTTS------------CHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred CCCC------------CHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 7567------------9999999999654489878388999980
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=321.95 Aligned_cols=257 Identities=20% Similarity=0.309 Sum_probs=190.9
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCC--CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCC
Q ss_conf 4999999232078740899883-499899999953124--5573689999999860168641113103353035899999
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 527 (740)
++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++|||||++++++. ++
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~--------~~ 73 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH--------TE 73 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEE--------ET
T ss_pred CCCEECCEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCC--------CC
T ss_conf 9977651772376809999999999979999998022257589999999999998679983887445332--------24
Q ss_pred CCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCC
Q ss_conf 72699984245764001101236788789999999999999999998719999802038889951114999244705899
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 607 (740)
..+++||||+.+ ++.+++.. .....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+|++|||+
T Consensus 74 ~~~~iv~e~~~~-~~~~~~~~-~~~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~ 148 (298)
T d1gz8a_ 74 NKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGL 148 (298)
T ss_dssp TEEEEEEECCSE-EHHHHHHH-TTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTH
T ss_pred CCEEEEEEECCC-CHHHHHHH-HCCCCCCHHHHHHHHHHHHHHHHHHHC---CCEECCCCCCHHEEECCCCCCEECCCCC
T ss_conf 320378862377-44555442-025688889999999999999998652---8899213571140113467621035786
Q ss_pred CCCC---------CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC---
Q ss_conf 8888---------8887776445200279999986643303699999883999988884201478888854118764---
Q 004637 608 PLPS---------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK--- 675 (740)
Q Consensus 608 ~~~~---------~~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--- 675 (740)
++.. ..++..+.+||.......++.++||||+||++|||+||+.||.+.+.......+........+.
T Consensus 149 a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 228 (298)
T d1gz8a_ 149 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228 (298)
T ss_dssp HHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred CEECCCCCCCCEEECCCCEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCC
T ss_conf 13436886410010365215411221366577742210333313427966879989889999999999832898333144
Q ss_pred -CCCCCC--CCC----CCCC---CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf -221369--322----3878---28899999999976246698989998999999
Q 004637 676 -LRAEAD--PSV----RGTY---AYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 -~~~~~d--~~l----~~~~---~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
.....+ ... .... ......++.+++.+|+..||++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp TGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 4222421243454322220444166789999999999763995579189999678
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=0 Score=321.46 Aligned_cols=256 Identities=15% Similarity=0.275 Sum_probs=194.0
Q ss_pred CCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEECCC--CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCC
Q ss_conf 4999999232078740899883499899999953124--55736899999998601686411131033530358999997
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||+|+||+||+|+.++|+.||||+++... ....+.+.+|+.++++++||||+++++++. ...
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~--------~~~ 73 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH--------TKK 73 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE--------CSS
T ss_pred CCCEECCEEECCCCCEEEEEEECCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECC--------CCC
T ss_conf 996343187227781899999689999999998123268589999999999998679986876601204--------677
Q ss_pred CEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCCC
Q ss_conf 26999842457640011012367887899999999999999999987199998020388899511149992447058998
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~ 608 (740)
..++++||+.++.+..+.. ....+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+|++|||.+
T Consensus 74 ~~~i~~e~~~~~~~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a 147 (286)
T d1ob3a_ 74 RLVLVFEHLDQDLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLA 147 (286)
T ss_dssp CEEEEEECCSEEHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred CEEEEEEEEHHHHHHHHHH---HCCCCCHHHHHHHHHHHHHHHHHHCC---CCEEECCCCCCEEEECCCCCEEECCCCCC
T ss_conf 3158997400456789986---04775144568999999999998605---74882678775056868997873236643
Q ss_pred CCC---------CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC-CC---
Q ss_conf 888---------88877764452002799999866433036999998839999888842014788888541187-64---
Q 004637 609 LPS---------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP-SK--- 675 (740)
Q Consensus 609 ~~~---------~~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~-~~--- 675 (740)
... ..+...+.+||.......++.++||||+||++|||++|+.||.+....+....+........ ..
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 227 (286)
T d1ob3a_ 148 RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227 (286)
T ss_dssp HHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred EECCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCEEEHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCC
T ss_conf 01146765410102431101378871788888410021117589999779799898898999999998638997110421
Q ss_pred CCCCC--CCCC-------CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 22136--9322-------387828899999999976246698989998999999
Q 004637 676 LRAEA--DPSV-------RGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 ~~~~~--d~~l-------~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
..... +... ...........+.+++.+|++.||++|||+.|++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp GGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 233322143333356764666512589999999999866896689099998569
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=315.27 Aligned_cols=267 Identities=14% Similarity=0.221 Sum_probs=197.9
Q ss_pred HCCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECC--CCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCC
Q ss_conf 44999999232078740899883-49989999995312--4557368999999986016864111310335303589999
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 526 (740)
.++|++.+.||+|+||+||+|+. .+|+.||||++... .......+.+|++++++++|+||+++++++..........
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
T ss_conf 27988999972274829999999899979999998422246378999999999999835999660676540246544445
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCC
Q ss_conf 97269998424576400110123678878999999999999999999871999980203888995111499924470589
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 606 (740)
....++|||||.++.+..+.. ....++......++.|++.||.|||+ .+|+||||||+|||++.++.+|++|||
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~---~~~~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~dfg 162 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFG 162 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTC---TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEECCCCCCCCHHHH---CCCCCCCHHHHHHHHHHHHHHHHHCC---CCEEECCCCCHHEEECCCCCEEEEECC
T ss_conf 763899985357874101222---03443308999999999999988522---998856767222036689968763135
Q ss_pred CCCCCC-------------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 988888-------------8877764452002799999866433036999998839999888842014788888541187
Q 004637 607 IPLPSK-------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAP 673 (740)
Q Consensus 607 l~~~~~-------------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 673 (740)
++.... .++..+.+||.......++.++||||+||++|||+||+.||.+.........+.......+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~ 242 (318)
T d3blha1 163 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 242 (318)
T ss_dssp TCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred EEEECCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 00223554443211356602497874289970799989178700678646617448799899899999999998418998
Q ss_pred CCCCCCCCCC-C---------CCCCCHH------HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 6422136932-2---------3878288------9999999997624669898999899999956
Q 004637 674 SKLRAEADPS-V---------RGTYAYD------SLRTTVEITINCLSKDAAKRPSIEDVLWNLQ 722 (740)
Q Consensus 674 ~~~~~~~d~~-l---------~~~~~~~------~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~ 722 (740)
.......+.. . ......+ ....+.+|+.+|++.||++|||++|++++--
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpf 307 (318)
T d3blha1 243 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 307 (318)
T ss_dssp TTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred HHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHH
T ss_conf 25534432034443320133445550334044459989999999987389658909999974950
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=316.84 Aligned_cols=266 Identities=15% Similarity=0.250 Sum_probs=195.5
Q ss_pred HCCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCC--CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCC
Q ss_conf 44999999232078740899883-499899999953124--557368999999986016864111310335303589999
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 526 (740)
.++|++.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|+.++|||||+++++|... +....
T Consensus 17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~--~~~~~ 94 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD--ETLDD 94 (346)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSC--SSTTT
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC--CCCCC
T ss_conf 7718998898017781999999999998999999852225969999999999999866898754799986357--65555
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCC
Q ss_conf 97269998424576400110123678878999999999999999999871999980203888995111499924470589
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 606 (740)
...+++||||| +++|..+.. ...+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+|++|||
T Consensus 95 ~~~~~lv~e~~-~~~l~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Dfg 166 (346)
T d1cm8a_ 95 FTDFYLVMPFM-GTDLGKLMK----HEKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFG 166 (346)
T ss_dssp CCCCEEEEECC-SEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCEEEEEEECC-CCCHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCHHHCCCCCCCCCCCCC
T ss_conf 41599998405-521899987----4022699999999999999999873---787645668511112100122113431
Q ss_pred CCCCCC------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 988888------88777644520027999998664330369999988399998888420147888885411876422136
Q 004637 607 IPLPSK------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 607 l~~~~~------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
++.... .++..+++||.......++.++||||+||++|||++|+.||.+.+...............+.......
T Consensus 167 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (346)
T d1cm8a_ 167 LARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 246 (346)
T ss_dssp TCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTC
T ss_pred CEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 02206876310245533358899817878996501030038999999786998889768999999850378848888653
Q ss_pred -----------CCCCCC----CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH--HHHHH
Q ss_conf -----------932238----7828899999999976246698989998999999--56534
Q 004637 681 -----------DPSVRG----TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN--LQYSI 725 (740)
Q Consensus 681 -----------d~~l~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~--L~~~~ 725 (740)
.+.... .........+.+|+.+|+..||++|||+.|++++ ++.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 247 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp SCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred CCHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 00034433115786665566775568999999999997729955792999996396237587
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=313.45 Aligned_cols=263 Identities=18% Similarity=0.261 Sum_probs=191.7
Q ss_pred HHCCCCCCCEEECCCCCCEEEEEE-CC-CCEEEEEEEECCC--CCCHHHHHHHHHHHHHC---CCCCCCEEECEEEEECC
Q ss_conf 844999999232078740899883-49-9899999953124--55736899999998601---68641113103353035
Q 004637 449 ATNNFDPTNLIGEGSQGQLYKGFL-TD-GSRVSVKCLKLKQ--RHLPQSLMQHVELLSKL---RHRHLVSILGHCILTYQ 521 (740)
Q Consensus 449 ~~~~f~~~~~lG~G~~g~Vyk~~~-~~-g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~~~ 521 (740)
..++|++.+.||+|+||+||+|+. .+ ++.||||+++... ......+.+|+.+++.+ +||||++++++|.....
T Consensus 5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
T ss_conf 75897988899215586999999988899899999980232451679999999999998742589880236632214666
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEE
Q ss_conf 89999972699984245764001101236788789999999999999999998719999802038889951114999244
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (740)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~k 601 (740)
......++++|||++|.+..... .....+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+|
T Consensus 85 ---~~~~~~~~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~k 156 (305)
T d1blxa_ 85 ---DRETKLTLVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIK 156 (305)
T ss_dssp ---SSEEEEEEEEECCSCBHHHHHHH--SCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred ---CCCCEEEEEEEECCCCCHHHHHH--CCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCCCCCEEEECCCCCEE
T ss_conf ---66746999997405871444443--037899989999999999999999975---8898357986278985899754
Q ss_pred EECCCCCCCC--------CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC-
Q ss_conf 7058998888--------8887776445200279999986643303699999883999988884201478888854118-
Q 004637 602 LSGYNIPLPS--------KKGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA- 672 (740)
Q Consensus 602 l~DFGl~~~~--------~~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~- 672 (740)
++|||++... ..++..+.+||... ...++.++||||+||++|||+||+.||.+.........+.......
T Consensus 157 l~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~-~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 235 (305)
T d1blxa_ 157 LADFGLARIYSFQMALTSVVVTLWYRAPEVLL-QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 235 (305)
T ss_dssp ECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred ECCHHHHHHHCCCCCCCCCCCCHHHCCCCHHC-CCCCCHHEHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 21000101100234577765485114831001-79888111000328999999878799899898999999998407996
Q ss_pred CCCCCCC----------CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 7642213----------69322387828899999999976246698989998999999
Q 004637 673 PSKLRAE----------ADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 673 ~~~~~~~----------~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
....... ..+.-...........+.+|+.+|++.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 236 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHCCCCCCCCHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 1105321111033302234564544044589999999999874896679189999669
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=313.16 Aligned_cols=260 Identities=15% Similarity=0.236 Sum_probs=188.5
Q ss_pred HCCCCCCCEEECCCCCCEEEEE-ECCCCEEEEEEEECCC-CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCC
Q ss_conf 4499999923207874089988-3499899999953124-5573689999999860168641113103353035899999
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~-~~~g~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 527 (740)
+++|++.+.||+|+||+||+|+ ..+|+.||||+++... ....+.+.+|+++|+.++||||+++++++..... ...
T Consensus 7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~---~~~ 83 (345)
T d1pmea_ 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI---EQM 83 (345)
T ss_dssp CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST---TTC
T ss_pred CCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC---CCC
T ss_conf 89859978994064809999999999949999998031095899999999999997689898858889950564---554
Q ss_pred CCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCC
Q ss_conf 72699984245764001101236788789999999999999999998719999802038889951114999244705899
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 607 (740)
.. +++++|+.+|+|.+++.. ..+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 84 ~~-~~l~~~~~~g~L~~~l~~----~~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~ 155 (345)
T d1pmea_ 84 KD-VYLVTHLMGADLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGL 155 (345)
T ss_dssp CC-EEEEEECCCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CE-EEEEEEECCCCHHHHHHC----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCEEEECCCCCEEECCCCC
T ss_conf 14-999996259865664405----899999999999999999999997---8986777876437887999778754570
Q ss_pred CCCCC------------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 88888------------887776445200279999986643303699999883999988884201478888854118764
Q 004637 608 PLPSK------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK 675 (740)
Q Consensus 608 ~~~~~------------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 675 (740)
+.... .++..+.+||.......++.++||||+||++|||+||+.||......................
T Consensus 156 a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (345)
T d1pmea_ 156 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 235 (345)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred EEECCCCCCCCEEECCCCCCCEECHHHHHHCCCCCCCHHHHHCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHH
T ss_conf 56504777641010110265200038786047888741010046701337766979978888899999876520699756
Q ss_pred C-CCCC----------CCCCCCCC----CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 2-2136----------93223878----28899999999976246698989998999999
Q 004637 676 L-RAEA----------DPSVRGTY----AYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 ~-~~~~----------d~~l~~~~----~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
. .... .+...... ......++.+++.+|+..||.+||++.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 236 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 642343322220244677557787778378999999999999764895679089998619
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=0 Score=303.51 Aligned_cols=293 Identities=22% Similarity=0.304 Sum_probs=250.5
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCCCCEEECC----CCEEEEEECCCCCCCCCC-CCCCCCCCC
Q ss_conf 997689999999871889999999999999988--9999820389489----978899947999899999-998577754
Q 004637 29 LTPSETRILFQVQKLLEYPEVLQGWTDWTNFCY--LPSSSSLKIVCTN----SRVTELTVIGNKSSPAHS-PKPTFGKFS 101 (740)
Q Consensus 29 ~~~~~~~~l~~~k~~~~~~~~l~~W~~~~~~C~--~~~~~~~~v~C~~----~~v~~l~l~~~~l~~~~~-~~~~~~~~~ 101 (740)
|.++|++||++||+++.+|..+++|..++|||. |. ||+|+. .||+.|+|.++++.+... |........
T Consensus 3 c~~~e~~aLl~~k~~~~~~~~l~sW~~~~d~C~~~w~-----gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~ 77 (313)
T d1ogqa_ 3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWL-----GVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPY 77 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCST-----TEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTT
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-----CEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCC
T ss_conf 8989999999999977999867788999999889488-----96974899947988998989988888879847846753
Q ss_pred CCCCCCCC-CCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 21002467-76877122631189778675522565756789012489999878732674742269246799998866512
Q 004637 102 ASQQSLSA-NFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (740)
Q Consensus 102 l~~l~l~~-n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~ 180 (740)
++.|+|++ |.+.+.+|+.+++|++|++|+|++|.+.+..|..+..+..|+.+++++|.+.+.+|..+.+++.|+.++++
T Consensus 78 L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~ 157 (313)
T d1ogqa_ 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCEEECC
T ss_conf 35202026543330024311454200110203564344332222201110011112245555685122067400000023
Q ss_pred CCCCCCCCCC-CCCCCCC-CEEECCCCCCCCCCCCCC--CCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
Q ss_conf 8607402899-7899999-899887999999996778--89868982268574458923559998858974377034436
Q 004637 181 DNLLNGSVPD-LQRLVLL-EELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI 256 (740)
Q Consensus 181 ~N~l~~~~p~-~~~l~~L-~~L~Ls~N~l~~~~p~~~--~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 256 (740)
+|.+++.+|. +..+..+ +.+++++|++++..|..+ .....+++.++...+.+|..+..+..++.+++++|.+.+.+
T Consensus 158 ~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~ 237 (313)
T d1ogqa_ 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 55335620312144311232310224643533243322222223333334332222222222222111222222222222
Q ss_pred CHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCC-CCCCC
Q ss_conf 4112057896389542454453478255499999989832763632489885788878403367777-88988
Q 004637 257 QSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC-LSGVN 328 (740)
Q Consensus 257 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~~~~N~-l~~~~ 328 (740)
| .+..+++++.|++++|+++|.+|..+..+++|++|++++|+|+|.+|. +..+..+..+.+.+|+ ++|.+
T Consensus 238 ~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~l~g~p 308 (313)
T d1ogqa_ 238 G-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp G-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSEEESTT
T ss_pred C-CCCCCCCCCCCCCCCCEECCCCCHHHHCCCCCCEEECCCCCCCCCCCC-CCCCCCCCHHHHCCCCCCCCCC
T ss_conf 2-222455444444765706660876884799999897958835166898-6667998978868895001989
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=311.49 Aligned_cols=234 Identities=20% Similarity=0.315 Sum_probs=182.8
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCC------CCHHHHHHHHHHHHHCC--CCCCCEEECEEEEECC
Q ss_conf 4999999232078740899883-4998999999531245------57368999999986016--8641113103353035
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR------HLPQSLMQHVELLSKLR--HRHLVSILGHCILTYQ 521 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~------~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~ 521 (740)
++|++.++||+|+||.||+|+. .+++.||||+++.... .....+.+|++++++++ |||||++++++.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~---- 79 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE---- 79 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE----
T ss_pred CEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE----
T ss_conf 8379967984087839999999999979999998568844334556799999999999974358988127999983----
Q ss_pred CCCCCCCCEEEEEECCCC-CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCC-CC
Q ss_conf 899999726999842457-6400110123678878999999999999999999871999980203888995111499-92
Q 004637 522 DHPNTGSTVFLVLEHISN-GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LT 599 (740)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~-~~ 599 (740)
+....++||||+.+ +++.+++.. ...+++.....++.|++.||.|||+ .+|+||||||+|||++.+ +.
T Consensus 80 ----~~~~~~lv~e~~~~~~~l~~~~~~---~~~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~ 149 (273)
T d1xwsa_ 80 ----RPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGE 149 (273)
T ss_dssp ----CSSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTE
T ss_pred ----ECCEEEEEEEECCCCCHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCEEEECCCCE
T ss_conf ----099689999833686228999861---5899999999999999999999987---797556676111477447884
Q ss_pred EEEECCCCCCCCC-------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 4470589988888-------887776445200279999986643303699999883999988884201478888854118
Q 004637 600 AKLSGYNIPLPSK-------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEA 672 (740)
Q Consensus 600 ~kl~DFGl~~~~~-------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 672 (740)
+|++|||+++... .++..+++||.......++.++||||+||++|||+||+.||.... .+.....
T Consensus 150 vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~~~~-- 221 (273)
T d1xwsa_ 150 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV-- 221 (273)
T ss_dssp EEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCC--
T ss_pred EEECCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCH------HHHHCCC--
T ss_conf 89775465353244455665658774799998489978865332554034536756889988736------7761544--
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 764221369322387828899999999976246698989998999999
Q 004637 673 PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 673 ~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
.....+ ..++.+++.+||..||++|||++|++++
T Consensus 222 --~~~~~~------------s~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 222 --FFRQRV------------SSECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp --CCSSCC------------CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --CCCCCC------------CHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf --778779------------9999999999760897589399998539
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=304.22 Aligned_cols=256 Identities=16% Similarity=0.212 Sum_probs=188.6
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCC--CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCC
Q ss_conf 4999999232078740899883-499899999953124--5573689999999860168641113103353035899999
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~ 527 (740)
++|++.+.||+|+||+||+|+. .+++.||||+++... ......+.+|+.+++.++||||+++++++. ..
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~--------~~ 73 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH--------SD 73 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE--------CS
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCC--------CC
T ss_conf 9978626971286819999999999969999998032178689999999999998567578882135444--------44
Q ss_pred CCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCC
Q ss_conf 72699984245764001101236788789999999999999999998719999802038889951114999244705899
Q 004637 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (740)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl 607 (740)
...++++||+.++++..++. ....+++..+..++.|++.||+|||. .+|+||||||+|||++.++.+|++|||.
T Consensus 74 ~~~~iv~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~ 147 (292)
T d1unla_ 74 KKLTLVFEFCDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp SEEEEEEECCSEEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred CCEEEEEEECCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHC---CCEEEECCCCCCCCCCCCCCEEEEECCH
T ss_conf 31158863023322211212---35654036789999999999877433---9986001467612113378266520460
Q ss_pred CCCCCCC---------CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHCCCC-C-
Q ss_conf 8888888---------77764452002799999866433036999998839999888-8420147888885411876-4-
Q 004637 608 PLPSKKG---------LESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKST-SEVDGLKLQLETCLAEAPS-K- 675 (740)
Q Consensus 608 ~~~~~~~---------~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~-~~~~~~~~~~~~~~~~~~~-~- 675 (740)
+...... ...+.++|.......++.++||||+||++|||++|+.||.. .+..+....+......... .
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (292)
T d1unla_ 148 ARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW 227 (292)
T ss_dssp CEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTC
T ss_pred HHCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH
T ss_conf 11046887510010344310146675069888804440265418899851899998899999999999861189973551
Q ss_pred --CCCCC---CCC------CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf --22136---932------2387828899999999976246698989998999999
Q 004637 676 --LRAEA---DPS------VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 676 --~~~~~---d~~------l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
..... +.. -...........+.+|+.+|++.||.+|||++|++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 34432221133444544310433065689999999999864996689099999649
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=309.16 Aligned_cols=244 Identities=19% Similarity=0.275 Sum_probs=187.7
Q ss_pred CCCCCCCEEECCCCCCEEEEEEC----CCCEEEEEEEECC----CCCCHHHHHHHHHHHHHCCC-CCCCEEECEEEEECC
Q ss_conf 49999992320787408998834----9989999995312----45573689999999860168-641113103353035
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLK----QRHLPQSLMQHVELLSKLRH-RHLVSILGHCILTYQ 521 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~~----~g~~vavK~l~~~----~~~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~~~ 521 (740)
++|+..+.||+|+||+||+|+.. +|+.||+|+++.. .....+.+.+|++++++++| |||+++++++.
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~---- 99 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ---- 99 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE----
T ss_pred HCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC----
T ss_conf 0259998983287839999998765887948999998367721016899999999999986467983999620002----
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEE
Q ss_conf 89999972699984245764001101236788789999999999999999998719999802038889951114999244
Q 004637 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (740)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~k 601 (740)
+....++++|||.+|+|.+++.. ...+.......++.|++.|+.|+|+ .+|+||||||+|||++.++.+|
T Consensus 100 ----~~~~~~~v~e~~~~~~L~~~i~~---~~~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vk 169 (322)
T d1vzoa_ 100 ----TETKLHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVV 169 (322)
T ss_dssp ----ETTEEEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEE
T ss_pred ----CCCCEEEEEECCCCCHHHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHC---CCEEECCCCCCCEEECCCCCEE
T ss_conf ----48730012312341179999873---0454378888889999999988514---9989654773201246999888
Q ss_pred EECCCCCCCCC----------CCCCCCCCCCCCCCC-CCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 70589988888----------887776445200279-9999866433036999998839999888842014788888541
Q 004637 602 LSGYNIPLPSK----------KGLESPLRGQYVSNQ-PGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 602 l~DFGl~~~~~----------~~~~~~~~~e~~~~~-~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 670 (740)
|+|||++.... .+...++++|..... ..++.++||||+||++|||+||+.||...........+.....
T Consensus 170 L~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~ 249 (322)
T d1vzoa_ 170 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 249 (322)
T ss_dssp ESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH
T ss_pred EEECCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 74132022203444432212223333310687605776887132517777999999768999888877779999998335
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC-----HHHHHHH
Q ss_conf 1876422136932238782889999999997624669898999-----8999999
Q 004637 671 EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPS-----IEDVLWN 720 (740)
Q Consensus 671 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~evl~~ 720 (740)
........ ....++.+++.+|+..||++||+ ++|++++
T Consensus 250 ~~~~~~~~------------~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 250 KSEPPYPQ------------EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp HCCCCCCT------------TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCCCCCCC------------CCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCC
T ss_conf 68998865------------47999999999974458988199974509999749
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=310.65 Aligned_cols=261 Identities=15% Similarity=0.229 Sum_probs=192.3
Q ss_pred HCCCCCCCEEECCCCCCEEEEE-ECCCCEEEEEEEECCCC--CCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCC
Q ss_conf 4499999923207874089988-34998999999531245--57368999999986016864111310335303589999
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~-~~~g~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 526 (740)
.++|++.+.||+|+||+||+|+ ..+|+.||||+++.... ...+.+.+|+++++.++|||+|++++++... ...++
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~--~~~~~ 94 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA--RSLEE 94 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC--SSTTT
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC--CCCCC
T ss_conf 9871888898317883999999999997999999882002868999999999999866898742599999634--64566
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCC
Q ss_conf 97269998424576400110123678878999999999999999999871999980203888995111499924470589
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 606 (740)
.. .+++++|+.+|+|.+++.. ..+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+|++|||
T Consensus 95 ~~-~~~i~~~~~gg~L~~~~~~----~~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg 166 (348)
T d2gfsa1 95 FN-DVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 166 (348)
T ss_dssp CC-CCEEEEECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC-
T ss_pred CC-EEEEEEEECCCCHHHHCCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86-4999996258862320022----453099999999999999999973---887651667763345543220013210
Q ss_pred CCCCCCC------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 9888888------8777644520027999998664330369999988399998888420147888885411876422136
Q 004637 607 IPLPSKK------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSKLRAEA 680 (740)
Q Consensus 607 l~~~~~~------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (740)
++..... ++..++++|.......++.++||||+||++|||++|+.||.+.+.......+.......+.......
T Consensus 167 ~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (348)
T d2gfsa1 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246 (348)
T ss_dssp ---CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTC
T ss_pred HHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHC
T ss_conf 00125754444345435558355337756785512432058999997688997889889999999973079975773200
Q ss_pred C-----------CCCCCCC----CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 9-----------3223878----28899999999976246698989998999999
Q 004637 681 D-----------PSVRGTY----AYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 681 d-----------~~l~~~~----~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
. +...... ......++.+|+.+|+..||.+|||+.|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 247 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp CCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 1024454443035578755566267899999999999775883459389998559
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=0 Score=300.62 Aligned_cols=252 Identities=15% Similarity=0.208 Sum_probs=185.8
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCC-CCCCCEEECEEEEECCCCCCCCC
Q ss_conf 4999999232078740899883-499899999953124557368999999986016-86411131033530358999997
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||+|+||+||+|+. .+++.||+|+++.. ..+.+.+|+++++.++ ||||+++++++.. ....
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~------~~~~ 105 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKD------PVSR 105 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEEC------TTTC
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHHCCCCCCCCEEEEEEEE------CCCC
T ss_conf 6718978983174819999998899979999998889---999999999999851579987679999981------6877
Q ss_pred CEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCC-CEEEECCCC
Q ss_conf 2699984245764001101236788789999999999999999998719999802038889951114999-244705899
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGYNI 607 (740)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~-~~kl~DFGl 607 (740)
..++|||||++|+|..+. ..+++.....++.|++.||.|||+ .+|+||||||+|||++.++ .+|++|||+
T Consensus 106 ~~~~v~e~~~~~~L~~~~------~~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~ 176 (328)
T d3bqca1 106 TPALVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGL 176 (328)
T ss_dssp SEEEEEECCCSCBGGGTT------TSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGG
T ss_pred CEEEEEEECCCCCHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCEEECCCCCEEEECCCCC
T ss_conf 126888631798589974------689999999999999999988764---33443456441237748998366415654
Q ss_pred CCCCCC--------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCH-HHHHHHHHH---------
Q ss_conf 888888--------87776445200279999986643303699999883999988884201-478888854---------
Q 004637 608 PLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDG-LKLQLETCL--------- 669 (740)
Q Consensus 608 ~~~~~~--------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~--------- 669 (740)
+..... ++..+.+||.......++.++||||+||+++||++|+.||....... ....+....
T Consensus 177 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~ 256 (328)
T d3bqca1 177 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 256 (328)
T ss_dssp CEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHH
T ss_pred CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 26646887444322486424761026888888452323354555876048899988760189999999987884155555
Q ss_pred ----HCCCCCCCCCCCCC--------CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf ----11876422136932--------2387828899999999976246698989998999999
Q 004637 670 ----AEAPSKLRAEADPS--------VRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWN 720 (740)
Q Consensus 670 ----~~~~~~~~~~~d~~--------l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 720 (740)
.............. ...........++.+|+.+|+..||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H 319 (328)
T d3bqca1 257 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319 (328)
T ss_dssp HHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHCCCCCCCCCCHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 422544474300000333433112115521124489999999999866995689089999649
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=301.53 Aligned_cols=260 Identities=17% Similarity=0.202 Sum_probs=192.1
Q ss_pred HCCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCC--CCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCC
Q ss_conf 44999999232078740899883-499899999953124--557368999999986016864111310335303589999
Q 004637 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (740)
Q Consensus 450 ~~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~ 526 (740)
.++|++.++||+|+||+||+|+. .+|+.||||+++... ......+.+|+.+++.++||||+++++++... +..+.
T Consensus 16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~--~~~~~ 93 (355)
T d2b1pa1 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ--KTLEE 93 (355)
T ss_dssp ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC--CSTTT
T ss_pred CCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC--CCCCC
T ss_conf 3775998896217585999999999998999999882336979999999999999864898764899897025--64345
Q ss_pred CCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCCEEEECCC
Q ss_conf 97269998424576400110123678878999999999999999999871999980203888995111499924470589
Q 004637 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (740)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFG 606 (740)
....|+|||||.++ +.+.+. ..+++.....++.|++.||.|||+ .+|+||||||+|||++.++..|++|||
T Consensus 94 ~~~~~iv~Ey~~~~-l~~~~~-----~~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~ 164 (355)
T d2b1pa1 94 FQDVYLVMELMDAN-LCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_dssp CCEEEEEEECCSEE-HHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCC
T ss_pred CCEEEEEEECCCHH-HHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCCEEEECHH
T ss_conf 76269998414467-787650-----389999999999999999988652---211245677632113654431320102
Q ss_pred CCCCCCC--------CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC---
Q ss_conf 9888888--------87776445200279999986643303699999883999988884201478888854118764---
Q 004637 607 IPLPSKK--------GLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLAEAPSK--- 675 (740)
Q Consensus 607 l~~~~~~--------~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--- 675 (740)
+++.... ++..+.+||... ...++.++||||+||+++||++|+.||.+.+.......+..........
T Consensus 165 ~~~~~~~~~~~~~~~~t~~y~aPE~l~-~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~ 243 (355)
T d2b1pa1 165 LARTAGTSFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243 (355)
T ss_dssp C---------------CCTTCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred HHHCCCCCCCCCCCCCCCCCCCHHHHC-CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
T ss_conf 321146665533221465555813314-7777877433356625789865989988897788999999720589879998
Q ss_pred --------------------CCCCCCCCCCC---CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf --------------------22136932238---78288999999999762466989899989999995
Q 004637 676 --------------------LRAEADPSVRG---TYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNL 721 (740)
Q Consensus 676 --------------------~~~~~d~~l~~---~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 721 (740)
........... ........++.+|+.+|+..||++|||++|++++-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hp 312 (355)
T d2b1pa1 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 312 (355)
T ss_dssp TSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCC
T ss_conf 765667777641754356664212643335432101333799999999998769945790899996694
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=298.43 Aligned_cols=249 Identities=14% Similarity=0.188 Sum_probs=185.1
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECEEEEECCCCCCCCCC
Q ss_conf 4999999232078740899883-499899999953124557368999999986016864111310335303589999972
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~~~~~ 529 (740)
++|++.+.||+|+||.||+|+. .+++.||||++..... ..++..|+++++.++|+|++..++.|.. .+..
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~-------~~~~ 77 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA-------EGDY 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEE-------ETTE
T ss_pred CEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEECHHCC--CHHHHHHHHHHHHCCCCCCCCEEEEEEE-------CCCE
T ss_conf 889996898507880999999988998999999721005--8889999999997038996017999995-------1987
Q ss_pred EEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEC---CCCCEEEECCC
Q ss_conf 699984245764001101236788789999999999999999998719999802038889951114---99924470589
Q 004637 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD---KALTAKLSGYN 606 (740)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld---~~~~~kl~DFG 606 (740)
.++||||+. |++.+.+.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++ .+..+|++|||
T Consensus 78 ~~ivme~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG 151 (299)
T d1ckia_ 78 NVMVMELLG-PSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 151 (299)
T ss_dssp EEEEEECCC-CBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCS
T ss_pred EEEEEEECC-CCHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCCCHHHCCCCCCCCCCEEEEECCC
T ss_conf 789998738-713332443--06887689999999999999999997---994426678766064335777615650467
Q ss_pred CCCCCC----------------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 988888----------------8877764452002799999866433036999998839999888842014788888541
Q 004637 607 IPLPSK----------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLETCLA 670 (740)
Q Consensus 607 l~~~~~----------------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 670 (740)
+++... .++..+++||... ...++.++|||||||++|||+||+.||.................
T Consensus 152 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~ 230 (299)
T d1ckia_ 152 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE 230 (299)
T ss_dssp SCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHT-TBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHH
T ss_pred CCEECCCCCCCCCEECCCCCCCCCCCCCCCHHHHH-CCCCCCHHHEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 51342554455410001357767873532999991-89989832188617789999849876655305779999998523
Q ss_pred ---CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf ---18764221369322387828899999999976246698989998999999565342
Q 004637 671 ---EAPSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQ 726 (740)
Q Consensus 671 ---~~~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 726 (740)
..+ .. .+.. ..+.++.+++.+||..+|++||++.++.+.|+.+..
T Consensus 231 ~~~~~~--~~-----~~~~----~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~ 278 (299)
T d1ckia_ 231 KKMSTP--IE-----VLCK----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278 (299)
T ss_dssp HHHHSC--HH-----HHTT----TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred CCCCCC--HH-----HHCC----CCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
T ss_conf 567898--35-----7534----788999999999843995579199999999999999
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=0 Score=289.02 Aligned_cols=251 Identities=14% Similarity=0.122 Sum_probs=188.1
Q ss_pred CCCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCC-CCCCEEECEEEEECCCCCCCCC
Q ss_conf 4999999232078740899883-4998999999531245573689999999860168-6411131033530358999997
Q 004637 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH-RHLVSILGHCILTYQDHPNTGS 528 (740)
Q Consensus 451 ~~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~~~~~~~~~~ 528 (740)
++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+|++.++.+.| +|++.+++++. .+.
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~--------~~~ 74 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ--------EGL 74 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEE--------ETT
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC--CCHHHHHHHHHHHHHCCCCCCCEEEEEEE--------CCC
T ss_conf 80699799841788299999998899799999975025--82999999999999648999877999960--------188
Q ss_pred CEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECC-----CCCEEEE
Q ss_conf 26999842457640011012367887899999999999999999987199998020388899511149-----9924470
Q 004637 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-----ALTAKLS 603 (740)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~-----~~~~kl~ 603 (740)
..++||||+ +|+|.+++.. ....+++.....++.+++.||.|||+ .+|+||||||+|||++. ++.+|++
T Consensus 75 ~~~~vme~~-~~~l~~~~~~--~~~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~ 148 (293)
T d1csna_ 75 HNVLVIDLL-GPSLEDLLDL--CGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVV 148 (293)
T ss_dssp EEEEEEECC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred CCEEEEEEC-CCCHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHH---CCCEECCCCCCCEEECCCCCCCCCCEEEC
T ss_conf 117999964-8887999975--20311068999999999999999997---79662667713152347543447956872
Q ss_pred CCCCCCCCC----------------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf 589988888----------------8877764452002799999866433036999998839999888842014788888
Q 004637 604 GYNIPLPSK----------------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGLKLQLET 667 (740)
Q Consensus 604 DFGl~~~~~----------------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~~~~~~~ 667 (740)
|||+++... .|+..+++||... ...++.++|||||||++|||+||+.||.+............
T Consensus 149 DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~-~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~ 227 (293)
T d1csna_ 149 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHL-GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER 227 (293)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHH
T ss_pred CCCEEEECCCCCCCCCEEECCCCCEEECHHHCCHHHHC-CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 36605771467665411102467627751026798964-88888699989831999999869876788530219999999
Q ss_pred HHHCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 54118-7642213693223878288999999999762466989899989999995653420
Q 004637 668 CLAEA-PSKLRAEADPSVRGTYAYDSLRTTVEITINCLSKDAAKRPSIEDVLWNLQYSIQV 727 (740)
Q Consensus 668 ~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 727 (740)
..... .....+ +.. ..+.++.+++..|+..+|++||+++.+.+.|+.+.+.
T Consensus 228 i~~~~~~~~~~~-----l~~----~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~ 279 (293)
T d1csna_ 228 IGEKKQSTPLRE-----LCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279 (293)
T ss_dssp HHHHHHHSCHHH-----HTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCHHH-----HCC----CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 970567999589-----657----9989999999998439930085999999999999997
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=267.56 Aligned_cols=259 Identities=15% Similarity=0.178 Sum_probs=180.7
Q ss_pred CCCCCCEEECCCCCCEEEEEE-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCC-----------CCCCCEEECEEEEE
Q ss_conf 999999232078740899883-499899999953124557368999999986016-----------86411131033530
Q 004637 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-----------HRHLVSILGHCILT 519 (740)
Q Consensus 452 ~f~~~~~lG~G~~g~Vyk~~~-~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~g~~~~~ 519 (740)
+|++.++||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++++.++ |+||+++++++...
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCC-CCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEEEC
T ss_conf 5799899750778189999999999799999983431-336899999999998401455555422767647899876312
Q ss_pred CCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCC-
Q ss_conf 3589999972699984245764001101236788789999999999999999998719999802038889951114999-
Q 004637 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL- 598 (740)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~~~- 598 (740)
.....+++++++..+..............+++..+..++.+++.||.|||+. .+|+||||||+|||++.++
T Consensus 93 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~--~~IvHrDlKp~NIll~~~~~ 164 (362)
T d1q8ya_ 93 ------GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDS 164 (362)
T ss_dssp ------ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEET
T ss_pred ------CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCHHHEEEECCCC
T ss_conf ------5652023432000354200000122346786899999999999998887640--58646567705705630576
Q ss_pred -----CEEEECCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHH------
Q ss_conf -----24470589988888------8877764452002799999866433036999998839999888842014------
Q 004637 599 -----TAKLSGYNIPLPSK------KGLESPLRGQYVSNQPGDGAKEDVYQLGVILLQVITGKQVKSTSEVDGL------ 661 (740)
Q Consensus 599 -----~~kl~DFGl~~~~~------~~~~~~~~~e~~~~~~~~~~ksDVwSfGvil~ElltG~~p~~~~~~~~~------ 661 (740)
.++++|||.+.... .++..+.+||... ...++.++||||+||+++||++|+.||........
T Consensus 165 ~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~ 243 (362)
T d1q8ya_ 165 PENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLL-GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 243 (362)
T ss_dssp TTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHH-TCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCC-CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 56443056753144212344542236652105713214-66777643201237899999878899898755432102689
Q ss_pred HHHHHHHHHCCCCCC----------------CCCCCC----------CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH
Q ss_conf 788888541187642----------------213693----------223878288999999999762466989899989
Q 004637 662 KLQLETCLAEAPSKL----------------RAEADP----------SVRGTYAYDSLRTTVEITINCLSKDAAKRPSIE 715 (740)
Q Consensus 662 ~~~~~~~~~~~~~~~----------------~~~~d~----------~l~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 715 (740)
...........+... ...... ............++.+|+.+|+..||.+|||++
T Consensus 244 ~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~ 323 (362)
T d1q8ya_ 244 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 323 (362)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHH
T ss_conf 99999983799878862453220001320122024323577644421000156743589999999998779945790899
Q ss_pred HHHHH
Q ss_conf 99999
Q 004637 716 DVLWN 720 (740)
Q Consensus 716 evl~~ 720 (740)
|++++
T Consensus 324 e~L~H 328 (362)
T d1q8ya_ 324 GLVNH 328 (362)
T ss_dssp HHHTC
T ss_pred HHHCC
T ss_conf 99669
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=5e-39 Score=216.76 Aligned_cols=229 Identities=24% Similarity=0.338 Sum_probs=209.1
Q ss_pred CCCCCCCCCCCCCCC--HHHHHHCCCCCCCEEECCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 542100246776877--1226311897786755225-6575678901248999987873267474226924679999886
Q 004637 100 FSASQQSLSANFNID--RFFTILTKLSNLKVLSLVS-LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKS 176 (740)
Q Consensus 100 ~~l~~l~l~~n~~~~--~~~~~l~~l~~L~~L~L~~-n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~ 176 (740)
..+..++|+++.+.+ .+|+.+++|++|++|+|++ |.++|.+|..|+++++|++|+|++|++.+..|..+..+..|+.
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCC
T ss_conf 79889989899888888798478467533520202654333002431145420011020356434433222220111001
Q ss_pred EECCCCCCCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCC----CCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 65128607402899-7899999899887999999996778----898689822685744589235599988589743770
Q 004637 177 IVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLS----KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNN 251 (740)
Q Consensus 177 L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~----~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 251 (740)
++++.|.+.+.+|. +.+++.|+.+++++|.+.+.+|... ..++.+.+..|++++..|..+..+..+ .++++.|.
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~ 208 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSE
T ss_pred CCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCC
T ss_conf 11122455556851220674000000235533562031214431123231022464353324332222222-33333343
Q ss_pred CCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 3443641120578963895424544534782554999999898327636324898857888784033677778898877
Q 004637 252 FVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTK 330 (740)
Q Consensus 252 l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~~~~N~l~~~~~~ 330 (740)
+.+.+|..+..+++++.+++++|.+.+.+| .+..++.|+.|++++|+++|.+|..+..++.++.+++++|.++|.+|+
T Consensus 209 ~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~ 286 (313)
T d1ogqa_ 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCEECCCCCHHHHCCCCCCEEECCCCCCCCCCCC
T ss_conf 322222222222221112222222222222-222455444444765706660876884799999897958835166898
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.8e-31 Score=177.57 Aligned_cols=222 Identities=18% Similarity=0.174 Sum_probs=160.7
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 54210024677687712263118977867552256575678901248999987873267474226924679999886651
Q 004637 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (740)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L 179 (740)
..++.|+|++|.+....+.+|.++++|++|++++|.+....|..|.+++.|+.|++++|+++ .+|..+ ...+..|.+
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~-~l~~~~--~~~l~~L~~ 107 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRV 107 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSC--CTTCCEEEC
T ss_pred CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCC-CCCCCH--HHHHHHHHC
T ss_conf 99798978499189869657604656523112344344523566527985578315687567-676400--111323210
Q ss_pred CCCCCCCCCC---------------------------CCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
Q ss_conf 2860740289---------------------------9789999989988799999999677889868982268574458
Q 004637 180 ADNLLNGSVP---------------------------DLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEI 232 (740)
Q Consensus 180 ~~N~l~~~~p---------------------------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~l~~N~l~g~~ 232 (740)
.+|.+.+..+ .+..+++|+++++++|.+.......+++++.|++.+|..++..
T Consensus 108 ~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~~~~~L~~L~l~~n~~~~~~ 187 (305)
T d1xkua_ 108 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVD 187 (305)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEEC
T ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
T ss_conf 24610234444540133110000123333346777642234565671203467745167101776678989788677888
Q ss_pred CCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC----
Q ss_conf 9235599988589743770344364112057896389542454453478255499999989832763632489885----
Q 004637 233 PSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCI---- 308 (740)
Q Consensus 233 p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~---- 308 (740)
+..|.++..++.|++++|.+.+..+..+.++++|+.|++++|+++ .+|..+..+++|++|++++|+|+..-...|
T Consensus 188 ~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~ 266 (305)
T d1xkua_ 188 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG 266 (305)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCC
T ss_conf 267641341330154455332223454334433224302554002-4631103346789898989865763810026721
Q ss_pred --CCCCCCCEEECCCCCCC
Q ss_conf --78887840336777788
Q 004637 309 --GSNSLNRTVVSTWNCLS 325 (740)
Q Consensus 309 --~~~~~l~~l~~~~N~l~ 325 (740)
.....++.+.+.+|.+.
T Consensus 267 ~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 267 YNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp CCTTSCCCSEEECCSSSSC
T ss_pred HHCCCCCCCEEECCCCCCC
T ss_conf 0021588897889899576
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-32 Score=180.78 Aligned_cols=201 Identities=16% Similarity=0.110 Sum_probs=116.0
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC-CCCCCCCCCC-CCCCCCCCEEEC
Q ss_conf 78675522565756789012489999878732674742269246799998866512-8607402899-789999989988
Q 004637 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA-DNLLNGSVPD-LQRLVLLEELNL 202 (740)
Q Consensus 125 ~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~-~N~l~~~~p~-~~~l~~L~~L~L 202 (740)
.+++|+|++|.+.+..+..|.+++.|++|++++|.+....+..+.+++.+..+... .|.++...+. +.++++|++|++
T Consensus 33 ~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l 112 (284)
T d1ozna_ 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (284)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEC
T ss_conf 98889774881798797786414213000013445433211121222222222222102235446201010102778756
Q ss_pred CCCCCCCCCCCC---CCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCC
Q ss_conf 799999999677---88986898226857445892355999885897437703443641120578963895424544534
Q 004637 203 GGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279 (740)
Q Consensus 203 s~N~l~~~~p~~---~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~ 279 (740)
++|.+....+.. ..+|+.+++.+|++++..+..|..+..|+.|++++|++.+..+..|.++++|+.+++++|++++.
T Consensus 113 ~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i 192 (284)
T d1ozna_ 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (284)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCCC
T ss_conf 88544320135332000121102001431445805740434050223141765662566654656341314211434662
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 7825549999998983276363248988578887840336777788
Q 004637 280 LPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325 (740)
Q Consensus 280 ~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~~~~N~l~ 325 (740)
.|..|..+++|+++|+++|++.+..|..+.....++.+++++|.+.
T Consensus 193 ~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
T ss_conf 8167665320002333335221000002355465688981199887
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-31 Score=176.49 Aligned_cols=206 Identities=18% Similarity=0.142 Sum_probs=183.0
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC-CCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 542100246776877122631189778675522565756789012489999878732-6747422692467999988665
Q 004637 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNIS-SNFIYGEIPMEITSLKNLKSIV 178 (740)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls-~N~l~g~ip~~l~~l~~L~~L~ 178 (740)
..++.|+|++|.+....+.+|.+++.|++|++++|.+....+..+.++..+..++.. .|.+....|..+.++++|+.|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEE
T ss_conf 99888977488179879778641421300001344543321112122222222222210223544620101010277875
Q ss_pred CCCCCCCCCCCC-CCCCCCCCEEECCCCCCCCCCCCC---CCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 128607402899-789999989988799999999677---8898689822685744589235599988589743770344
Q 004637 179 LADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (740)
Q Consensus 179 L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~---~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 254 (740)
+++|.+....+. +....+|+.+++++|+++...+.. .++|+.|++.+|++++..+..|.+++.|+.+++++|++.+
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~ 191 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCCCCC
T ss_conf 68854432013533200012110200143144580574043405022314176566256665465634131421143466
Q ss_pred CCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 364112057896389542454453478255499999989832763632489
Q 004637 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLP 305 (740)
Q Consensus 255 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~ls~N~l~g~~p 305 (740)
..|..|.++++|++|++++|++.+..+..+..+.+|+++++++|.+....+
T Consensus 192 i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~ 242 (284)
T d1ozna_ 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (284)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
T ss_conf 281676653200023333352210000023554656889811998878756
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.1e-30 Score=173.51 Aligned_cols=175 Identities=20% Similarity=0.181 Sum_probs=117.3
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 77867552256575678901248999987873267474226924679999886651286074028997899999899887
Q 004637 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLG 203 (740)
Q Consensus 124 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls 203 (740)
+.|++|+|++|.+.+..+..|.++++|+.|+|++|.|+ .+|. ++.+++|+.|+|++|+++..++.+..+++|++|+++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~ 108 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQV-DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVS 108 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEEC-CSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECC
T ss_pred CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC-CCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 68898988499289859778634565522135665444-4311-111223211111222221111121222222222222
Q ss_pred CCCCCCCCCCC---CCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCC
Q ss_conf 99999999677---889868982268574458923559998858974377034436411205789638954245445347
Q 004637 204 GNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEAL 280 (740)
Q Consensus 204 ~N~l~~~~p~~---~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~ 280 (740)
+|.+....+.. ..++..|.+.+|.++...+..+..+..|+.+++++|++++..+..|..+++|++|+|++|+|+ .+
T Consensus 109 ~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~l 187 (266)
T d1p9ag_ 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TI 187 (266)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CC
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CC
T ss_conf 23110110011222211112212434210221233322111000000015652237200134212423430139785-56
Q ss_pred CCCCCCCCCCCEEECCCCCCC
Q ss_conf 825549999998983276363
Q 004637 281 PVNISCSAKLNFVEISHNLLI 301 (740)
Q Consensus 281 p~~~~~~~~L~~l~ls~N~l~ 301 (740)
|..+..+++|+.|+|++|.+.
T Consensus 188 p~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 188 PKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CTTTTTTCCCSEEECCSCCBC
T ss_pred CHHHCCCCCCCEEEECCCCCC
T ss_conf 866777888999983699987
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-30 Score=172.86 Aligned_cols=199 Identities=18% Similarity=0.159 Sum_probs=127.9
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 89778675522565756789012489999878732674742269246799998866512860740289978999998998
Q 004637 122 KLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELN 201 (740)
Q Consensus 122 ~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ 201 (740)
+...+..++.++++++ .+|..+. +.|+.|+|++|.|++..+..|.++++|+.|+|++|+|+. ++.+..+++|++|+
T Consensus 8 ~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~ 83 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVDGTLPVLGTLD 83 (266)
T ss_dssp CSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECCSCCTTCCEEE
T ss_pred CCCCCEEEECCCCCCC-EECCCCC--CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC
T ss_conf 2689869980699988-6196757--688989884992898597786345655221356654444-31111122321111
Q ss_pred CCCCCCCCCCCC--CCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCC
Q ss_conf 879999999967--788986898226857445892355999885897437703443641120578963895424544534
Q 004637 202 LGGNDFGPKFPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279 (740)
Q Consensus 202 Ls~N~l~~~~p~--~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~ 279 (740)
|++|++....+. .+++|+.|++++|.+....+..+..+..++.|++++|.+....+..+..++.++.+++++|++++.
T Consensus 84 Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~ 163 (266)
T d1p9ag_ 84 LSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 163 (266)
T ss_dssp CCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHCCCCCCCCCCC
T ss_conf 12222211111212222222222222311011001122221111221243421022123332211100000001565223
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 7825549999998983276363248988578887840336777788
Q 004637 280 LPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325 (740)
Q Consensus 280 ~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~~~~N~l~ 325 (740)
.+..+..+++|++|++++|+|+ .+|..+.....++.+++++|.+.
T Consensus 164 ~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 164 PAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCCCCCCCCCCCEEECCCCCCC-CCCHHHCCCCCCCEEEECCCCCC
T ss_conf 7200134212423430139785-56866777888999983699987
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.96 E-value=4.8e-27 Score=154.63 Aligned_cols=239 Identities=21% Similarity=0.204 Sum_probs=112.9
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 97889994799989999999857775421002467768771226311897786755225657567890124899998787
Q 004637 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (740)
Q Consensus 75 ~~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~ 154 (740)
..++.|++.++++.. +.+ .-....+..|+|++|.+.+.. .++++++|++|++++|.+.+. + .++.+++|+.|+
T Consensus 44 ~~l~~L~l~~~~I~~-l~g--l~~L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i-~-~l~~l~~L~~L~ 116 (384)
T d2omza2 44 DQVTTLQADRLGIKS-IDG--VEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADI-T-PLANLTNLTGLT 116 (384)
T ss_dssp TTCCEEECCSSCCCC-CTT--GGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCC-CCC--CCCCCCCCEEECCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCC-C-CCCCCCCCCCCC
T ss_conf 787899899989877-624--245899998968188179886--334771101030134333222-2-111233433344
Q ss_pred CCCCCCCCCCC---------------------------------------------------------------CCCCCC
Q ss_conf 32674742269---------------------------------------------------------------246799
Q 004637 155 ISSNFIYGEIP---------------------------------------------------------------MEITSL 171 (740)
Q Consensus 155 Ls~N~l~g~ip---------------------------------------------------------------~~l~~l 171 (740)
+++|.+++..+ ..+..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (384)
T d2omza2 117 LFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKL 196 (384)
T ss_dssp CCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 33222222222222222211213466313100232222112222212322011112454211011222433321100223
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC-CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 99886651286074028997899999899887999999996-77889868982268574458923559998858974377
Q 004637 172 KNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFP-SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSN 250 (740)
Q Consensus 172 ~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 250 (740)
+++..+++++|.+++..| +..+++|+.|++++|.++.... ..+++|+.+++.+|.+++..+ +..+++|+.|++++|
T Consensus 197 ~~~~~l~l~~n~i~~~~~-~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~ 273 (384)
T d2omza2 197 TNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 273 (384)
T ss_dssp TTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSS
T ss_pred CCCCEEECCCCCCCCCCC-CCCCCCCCEEECCCCCCCCCCHHHCCCCCCHHCCCCCCCCCCCC--CCCCCCCCEEECCCC
T ss_conf 532333035774478786-44457787888877777896134325653410044674478775--355466877545674
Q ss_pred CCCCCCC--------------------HHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 0344364--------------------11205789638954245445347825549999998983276363248988578
Q 004637 251 NFVGPIQ--------------------SFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310 (740)
Q Consensus 251 ~l~g~~p--------------------~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~ 310 (740)
++.+..+ ..+..+++++.+++++|++++.. .+..+++|+.|++++|++++ ++ .+..
T Consensus 274 ~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~ 349 (384)
T d2omza2 274 QISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLAN 349 (384)
T ss_dssp CCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEECCCCCCCCCC--CCCCCCCCCEEECCCCCCCC-CH-HHCC
T ss_conf 45787732356522223323233333221000024676777788778984--53668988989898998999-74-6708
Q ss_pred CCCCCEEECCCCCCCCC
Q ss_conf 88784033677778898
Q 004637 311 NSLNRTVVSTWNCLSGV 327 (740)
Q Consensus 311 ~~~l~~l~~~~N~l~~~ 327 (740)
++.++.+++++|.+++.
T Consensus 350 l~~L~~L~l~~N~l~~l 366 (384)
T d2omza2 350 LTNINWLSAGHNQISDL 366 (384)
T ss_dssp CTTCCEEECCSSCCCBC
T ss_pred CCCCCEEECCCCCCCCC
T ss_conf 99999898979958998
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=1.3e-26 Score=152.37 Aligned_cols=199 Identities=19% Similarity=0.218 Sum_probs=168.7
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 77867552256575678901248999987873267474226924679999886651286074028997899999899887
Q 004637 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLG 203 (740)
Q Consensus 124 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls 203 (740)
+.+++|+|++|.+....+..|.++++|+.|++++|.+....|..|.++++|+.|++++|+++..+..+ ...+..|+++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~~--~~~l~~L~~~ 108 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKM--PKTLQELRVH 108 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSC--CTTCCEEECC
T ss_pred CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCCH--HHHHHHHHCC
T ss_conf 99798978499189869657604656523112344344523566527985578315687567676400--1113232102
Q ss_pred CCCCCCCCC-----------------------------CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 999999996-----------------------------778898689822685744589235599988589743770344
Q 004637 204 GNDFGPKFP-----------------------------SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (740)
Q Consensus 204 ~N~l~~~~p-----------------------------~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 254 (740)
+|.+....+ ...++|+.+.+.+|+++ .+|..+ +++|+.|++++|...+
T Consensus 109 ~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~ 185 (305)
T d1xkua_ 109 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITK 185 (305)
T ss_dssp SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCE
T ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCC--CCCCCEEECCCCCCCC
T ss_conf 4610234444540133110000123333346777642234565671203467745-167101--7766789897886778
Q ss_pred CCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
Q ss_conf 36411205789638954245445347825549999998983276363248988578887840336777788988
Q 004637 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (740)
Q Consensus 255 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~~~~N~l~~~~ 328 (740)
..+..+.+++.++.|++++|.+.+..+..+..+++|++|++++|+|+ .+|..+..++.++.+++++|.++...
T Consensus 186 ~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~ 258 (305)
T d1xkua_ 186 VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIG 258 (305)
T ss_dssp ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCC
T ss_pred CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCCCCC
T ss_conf 88267641341330154455332223454334433224302554002-46311033467898989898657638
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.95 E-value=4.5e-29 Score=165.12 Aligned_cols=162 Identities=14% Similarity=0.110 Sum_probs=114.8
Q ss_pred CCCEEECCCCCCEEEEEECCCCEEEEEEEECCCCC------------------CHHHHHHHHHHHHHCCCCCCCEEECEE
Q ss_conf 99923207874089988349989999995312455------------------736899999998601686411131033
Q 004637 455 PTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH------------------LPQSLMQHVELLSKLRHRHLVSILGHC 516 (740)
Q Consensus 455 ~~~~lG~G~~g~Vyk~~~~~g~~vavK~l~~~~~~------------------~~~~~~~e~~~l~~l~H~niv~l~g~~ 516 (740)
+.+.||+|+||.||+|+..+|+.||||+++..... .......|...+.++.|.+++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred HCCEEEECCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf 27780248565999999799999999998604434666556563000888999999778999999981699914499862
Q ss_pred EEECCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECC
Q ss_conf 53035899999726999842457640011012367887899999999999999999987199998020388899511149
Q 004637 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596 (740)
Q Consensus 517 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk~~NILld~ 596 (740)
. .+++|||++++.+.++. ......++.+++++++|||. .+|+||||||+|||+++
T Consensus 84 ~------------~~lvme~~~~~~~~~l~----------~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~ 138 (191)
T d1zara2 84 G------------NAVLMELIDAKELYRVR----------VENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSE 138 (191)
T ss_dssp T------------TEEEEECCCCEEGGGCC----------CSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEET
T ss_pred C------------CEEEEEEECCCCCCCHH----------HHHHHHHHHHHHHHHHHHHH---CCEEECCCCHHHEEEEC
T ss_conf 8------------88999950456542001----------57899999999999999826---88898368903611428
Q ss_pred CCCEEEECCCCCCCCCCCCCCCC-C------CCCCCCCCCCCCCCCEEHHHHHHH
Q ss_conf 99244705899888888877764-4------520027999998664330369999
Q 004637 597 ALTAKLSGYNIPLPSKKGLESPL-R------GQYVSNQPGDGAKEDVYQLGVILL 644 (740)
Q Consensus 597 ~~~~kl~DFGl~~~~~~~~~~~~-~------~e~~~~~~~~~~ksDVwSfGvil~ 644 (740)
+ .++++|||.+..........+ . .++. ...|+.++|+||..--++
T Consensus 139 ~-~~~liDFG~a~~~~~~~~~~~l~rd~~~~~~~f--~r~y~~~~d~~s~~~~~~ 190 (191)
T d1zara2 139 E-GIWIIDFPQSVEVGEEGWREILERDVRNIITYF--SRTYRTEKDINSAIDRIL 190 (191)
T ss_dssp T-EEEECCCTTCEETTSTTHHHHHHHHHHHHHHHH--HHHHCCCCCHHHHHHHHH
T ss_pred C-CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHH
T ss_conf 9-899987788430899870999987799999997--578998446899999874
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.94 E-value=1.4e-25 Score=146.97 Aligned_cols=164 Identities=23% Similarity=0.303 Sum_probs=91.3
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC-CCCCCCEEECCCC
Q ss_conf 999878732674742269246799998866512860740289978999998998879999999967-7889868982268
Q 004637 148 WSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS-LSKNIVSVILRNN 226 (740)
Q Consensus 148 ~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~L~~L~l~~N 226 (740)
++|+.|++++|.++ .+| .+..+++|+.|++++|.+++.+ .+..+++|+.|++++|.+.+..+- ....+..+.+..|
T Consensus 219 ~~L~~L~l~~n~l~-~~~-~l~~l~~L~~L~l~~n~l~~~~-~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n 295 (384)
T d2omza2 219 TNLDELSLNGNQLK-DIG-TLASLTNLTDLDLANNQISNLA-PLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 295 (384)
T ss_dssp TTCCEEECCSSCCC-CCG-GGGGCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSS
T ss_pred CCCCEEECCCCCCC-CCC-HHHCCCCCCHHCCCCCCCCCCC-CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 77878888777778-961-3432565341004467447877-53554668775456744578773235652222332323
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 57445892355999885897437703443641120578963895424544534782554999999898327636324898
Q 004637 227 SLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPS 306 (740)
Q Consensus 227 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~ls~N~l~g~~p~ 306 (740)
.+++ ...+..+..++.|++++|++++..+ +..+++|+.|++++|++++ ++ .+..+++|++|++++|++++..|
T Consensus 296 ~l~~--~~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~- 368 (384)
T d2omza2 296 QLED--ISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP- 368 (384)
T ss_dssp CCSC--CGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG-
T ss_pred CCCC--CCCCCHHCCCCEEECCCCCCCCCCC--CCCCCCCCEEECCCCCCCC-CH-HHCCCCCCCEEECCCCCCCCCHH-
T ss_conf 3333--2210000246767777887789845--3668988989898998999-74-67089999989897995899800-
Q ss_pred CCCCCCCCCEEECCCC
Q ss_conf 8578887840336777
Q 004637 307 CIGSNSLNRTVVSTWN 322 (740)
Q Consensus 307 ~~~~~~~l~~l~~~~N 322 (740)
+..++.++.+++++|
T Consensus 369 -l~~l~~L~~L~L~~N 383 (384)
T d2omza2 369 -LANLTRITQLGLNDQ 383 (384)
T ss_dssp -GTTCTTCSEEECCCE
T ss_pred -HCCCCCCCEEECCCC
T ss_conf -003999999639789
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.92 E-value=6e-24 Score=138.57 Aligned_cols=202 Identities=18% Similarity=0.224 Sum_probs=147.2
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 00246776877122631189778675522565756789012489999878732674742269246799998866512860
Q 004637 104 QQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL 183 (740)
Q Consensus 104 ~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~ 183 (740)
.+++..+...+.. .+..+.+|+.|++.+|++. .++ .+.++++|+.|++++|.+.+..| +..+++|+.+++++|.
T Consensus 23 ~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~ 96 (227)
T d1h6ua2 23 KIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP 96 (227)
T ss_dssp HHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred HHHHCCCCCCCCC--CHHHCCCCCEEECCCCCCC-CCH-HHHCCCCCCEEECCCCEEECCCC--CCCCCCCCCCCCCCCC
T ss_conf 9984888767757--9878488689977799997-664-57448888376357853202543--1123343201211122
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCC-CCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCC
Q ss_conf 740289978999998998879999999967-7889868982268574458923559998858974377034436411205
Q 004637 184 LNGSVPDLQRLVLLEELNLGGNDFGPKFPS-LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFS 262 (740)
Q Consensus 184 l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 262 (740)
++ .++.+.++++|+.+++++|...+..+. ..+.+..+.+..+.+.... .+..+.+|+.|++++|.+....+ +.+
T Consensus 97 ~~-~i~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~~~--l~~ 171 (227)
T d1h6ua2 97 LK-NVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDLTP--LAN 171 (227)
T ss_dssp CS-CCGGGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCCGG--GTT
T ss_pred CC-CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHCHHHHHCHHH--HHCCCCCCCCCCCCCCCCCCCHH--HCC
T ss_conf 22-22222222222122122244331100000230122200000000000--00102111002333333331001--056
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 7896389542454453478255499999989832763632489885788878403367
Q 004637 263 LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVST 320 (740)
Q Consensus 263 l~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~~~ 320 (740)
+++|+.|++++|++++ ++ .+..+++|++|++++|++++..| +..++.++.++++
T Consensus 172 l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 172 LSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred CCCCEECCCCCCCCCC-CH-HHCCCCCCCEEECCCCCCCCCCC--CCCCCCCCEEEEE
T ss_conf 4633564458884177-85-34479999989795996899802--0369998989712
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.90 E-value=1.1e-22 Score=132.03 Aligned_cols=183 Identities=20% Similarity=0.243 Sum_probs=145.4
Q ss_pred CCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 21002467768771226311897786755225657567890124899998787326747422692467999988665128
Q 004637 102 ASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLAD 181 (740)
Q Consensus 102 l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~ 181 (740)
+..+++.+|.+.+ + +.+..+++|+.|+|++|.+.+..| +..+++|+++++++|.++ .++ .+..+++|+.+.+++
T Consensus 43 L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l~~ 116 (227)
T d1h6ua2 43 ITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDLTS 116 (227)
T ss_dssp CCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEECTT
T ss_pred CCEEECCCCCCCC-C-HHHHCCCCCCEEECCCCEEECCCC--CCCCCCCCCCCCCCCCCC-CCC-CCCCCCCCCCCCCCC
T ss_conf 6899777999976-6-457448888376357853202543--112334320121112222-222-222222221221222
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCCCC-CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHH
Q ss_conf 6074028997899999899887999999996-778898689822685744589235599988589743770344364112
Q 004637 182 NLLNGSVPDLQRLVLLEELNLGGNDFGPKFP-SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFL 260 (740)
Q Consensus 182 N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~ 260 (740)
|...+. +.+.....+..+.++++.+....+ ...++|+.|.+.+|.++... .+.++++|+.|++++|++.+. + .+
T Consensus 117 ~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~l-~-~l 191 (227)
T d1h6ua2 117 TQITDV-TPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISDI-S-PL 191 (227)
T ss_dssp SCCCCC-GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCC-G-GG
T ss_pred CCCCCC-CHHCCCCCHHHHHCHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCH--HHCCCCCCEECCCCCCCCCCC-H-HH
T ss_conf 443311-000002301222000000000000010211100233333333100--105646335644588841778-5-34
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 0578963895424544534782554999999898327
Q 004637 261 FSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297 (740)
Q Consensus 261 ~~l~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~ls~ 297 (740)
.++++|++|++++|++++. + .+..+++|+.|++++
T Consensus 192 ~~l~~L~~L~Ls~N~lt~i-~-~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 192 ASLPNLIEVHLKNNQISDV-S-PLANTSNLFIVTLTN 226 (227)
T ss_dssp GGCTTCCEEECTTSCCCBC-G-GGTTCTTCCEEEEEE
T ss_pred CCCCCCCEEECCCCCCCCC-C-CCCCCCCCCEEEEEC
T ss_conf 4799999897959968998-0-203699989897129
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=4.6e-23 Score=133.96 Aligned_cols=193 Identities=16% Similarity=0.058 Sum_probs=91.2
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC-CCCCCCCCCEEECC-CCCCCCCCCC-CCCCCCCCEEE
Q ss_conf 786755225657567890124899998787326747422692-46799998866512-8607402899-78999998998
Q 004637 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPM-EITSLKNLKSIVLA-DNLLNGSVPD-LQRLVLLEELN 201 (740)
Q Consensus 125 ~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~-~l~~l~~L~~L~L~-~N~l~~~~p~-~~~l~~L~~L~ 201 (740)
.+++|+|++|.+....+..|.++++|++|++++|.+...+|. .+.+++.++.+.+. .|.+....+. +.++++|++|+
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 88999876991896496686146432321102211242010011222222222111112343222222122222222223
Q ss_pred CCCCCCCCCCCC-C---CCCCCEEECCCCCCCCCCCCCCCCCC-CCCEEECCCCCCCCCCCHHHCCCCCCCE-EECCCCC
Q ss_conf 879999999967-7---88986898226857445892355999-8858974377034436411205789638-9542454
Q 004637 202 LGGNDFGPKFPS-L---SKNIVSVILRNNSLRSEIPSGLKNFD-QLKQFDISSNNFVGPIQSFLFSLPSILY-LNLAGNQ 275 (740)
Q Consensus 202 Ls~N~l~~~~p~-~---~~~L~~L~l~~N~l~g~~p~~~~~l~-~L~~L~l~~N~l~g~~p~~~~~l~~L~~-L~ls~N~ 275 (740)
+++|.+....+. . ...+..+...++.+....+..|..+. .+..+++++|+++...+.. ....++.. +++++|+
T Consensus 110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~-~~~~~l~~~~~l~~n~ 188 (242)
T d1xwdc1 110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCA-FNGTQLDELNLSDNNN 188 (242)
T ss_dssp EESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTT-TTTCCEEEEECTTCTT
T ss_pred CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC-CCCHHHHCCCCCCCCC
T ss_conf 421111255433322211112222222121112222222222331001220012333322222-2201110121235432
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 4534782554999999898327636324898857888784033
Q 004637 276 LSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVV 318 (740)
Q Consensus 276 l~~~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~ 318 (740)
++...+..|..+++|++|++++|+++...+..+..+..++.+.
T Consensus 189 l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~ 231 (242)
T d1xwdc1 189 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARS 231 (242)
T ss_dssp CCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSS
T ss_pred CCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 4642478866899999898979928945977973771341476
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.90 E-value=1e-22 Score=132.12 Aligned_cols=179 Identities=20% Similarity=0.256 Sum_probs=124.0
Q ss_pred CCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 24677687712263118977867552256575678901248999987873267474226924679999886651286074
Q 004637 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLN 185 (740)
Q Consensus 106 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~ 185 (740)
.+..+.+.+.++ ...+.+|+.|++++|.+.. +++ +..+++|+.|++++|.+++ ++ .++.+++|+.|++++|+++
T Consensus 30 ~l~~~~~~~~~~--~~~L~~L~~L~l~~~~i~~-l~~-l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~ 103 (210)
T d1h6ta2 30 NLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQG-IQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK 103 (210)
T ss_dssp HTTCSCTTSEEC--HHHHHTCCEEECTTSCCCC-CTT-GGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC
T ss_pred HHCCCCCCCCCC--HHHHCCCCEEECCCCCCCC-CHH-HHHCCCCCEEECCCCCCCC-CC-CCCCCCCCCCCCCCCCCCC
T ss_conf 857576577518--8795484589782798887-444-7648998987698960258-60-1135862120143333321
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCC-CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCC
Q ss_conf 028997899999899887999999996-7788986898226857445892355999885897437703443641120578
Q 004637 186 GSVPDLQRLVLLEELNLGGNDFGPKFP-SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLP 264 (740)
Q Consensus 186 ~~~p~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~ 264 (740)
+ ++.+.++++|+.|++++|.+....+ ...+.++.+++..|.++. +..+..+++|+.+++++|++.+..+ +.+++
T Consensus 104 ~-l~~l~~l~~L~~L~l~~~~~~~~~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i~~--l~~l~ 178 (210)
T d1h6ta2 104 D-LSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIVP--LAGLT 178 (210)
T ss_dssp C-GGGGTTCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCGG--GTTCT
T ss_pred C-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCC--CCCCC
T ss_conf 2-22121222111223456532211220111112221122233345--4310001332100134643025645--36789
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 963895424544534782554999999898327
Q 004637 265 SILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297 (740)
Q Consensus 265 ~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~ls~ 297 (740)
+|+.|++++|+++. +| .+..+++|++|++++
T Consensus 179 ~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 179 KLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp TCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred CCCEEECCCCCCCC-CH-HHCCCCCCCEEECCC
T ss_conf 89999897998998-72-116999989997118
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.4e-22 Score=131.43 Aligned_cols=196 Identities=12% Similarity=0.057 Sum_probs=151.9
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCC-CCCCCCCCCCEEECCC-CCCCCCCCCCCCCCCCCCEEE
Q ss_conf 42100246776877122631189778675522565756789-0124899998787326-747422692467999988665
Q 004637 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLP-SKINRFWSLEVLNISS-NFIYGEIPMEITSLKNLKSIV 178 (740)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p-~~l~~l~~L~~L~Ls~-N~l~g~ip~~l~~l~~L~~L~ 178 (740)
.+.++++++|.+....+.+|.++++|++|+|++|.+...+| ..|.+++.++.+++.. |.+....+..+.++++|+.++
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 88999876991896496686146432321102211242010011222222222111112343222222122222222223
Q ss_pred CCCCCCCCCCC--CCCCCCCCCEEECCCCCCCCCCCCC----CCCCCEEECCCCCCCCCCCCCCCCCCCCCEE-ECCCCC
Q ss_conf 12860740289--9789999989988799999999677----8898689822685744589235599988589-743770
Q 004637 179 LADNLLNGSVP--DLQRLVLLEELNLGGNDFGPKFPSL----SKNIVSVILRNNSLRSEIPSGLKNFDQLKQF-DISSNN 251 (740)
Q Consensus 179 L~~N~l~~~~p--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L-~l~~N~ 251 (740)
+++|.+....+ .+..+..+..+..+++.+....+.. ...+..+++.+|+++. ++....+..++..+ ++++|+
T Consensus 110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~-i~~~~~~~~~l~~~~~l~~n~ 188 (242)
T d1xwdc1 110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNCAFNGTQLDELNLSDNNN 188 (242)
T ss_dssp EESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTTTTTCCEEEEECTTCTT
T ss_pred CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC-CCCCCCCCHHHHCCCCCCCCC
T ss_conf 4211112554333222111122222221211122222222223310012200123333-222222201110121235432
Q ss_pred CCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 3443641120578963895424544534782554999999898327
Q 004637 252 FVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297 (740)
Q Consensus 252 l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~ls~ 297 (740)
++...+..|.++++|+.|++++|+++...+..+.+++.|+.+++.+
T Consensus 189 l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 189 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp CCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred CCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCCCC
T ss_conf 4642478866899999898979928945977973771341476788
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.88 E-value=6.5e-22 Score=127.99 Aligned_cols=175 Identities=22% Similarity=0.294 Sum_probs=95.3
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 02467768771226311897786755225657567890124899998787326747422692467999988665128607
Q 004637 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLL 184 (740)
Q Consensus 105 l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l 184 (740)
..+..+.+.+... ...+.+++.|++++|++. .++ .+..+++|++|++++|.+++ +++ +.++++|+.|++++|.+
T Consensus 23 ~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~-~l~-~l~~l~nL~~L~Ls~N~l~~-~~~-l~~l~~L~~L~l~~n~~ 96 (199)
T d2omxa2 23 TVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQI 96 (199)
T ss_dssp HHTTCSSTTSEEC--HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCC
T ss_pred HHHCCCCCCCCCC--HHHHCCCCEEECCCCCCC-CCC-CCCCCCCCCCCCCCCCCCCC-CCC-CCCCCCCCCCCCCCCCC
T ss_conf 9967787788559--879468789989999997-752-02137886757545655667-640-16775223111122222
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCC-CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCC
Q ss_conf 4028997899999899887999999996-778898689822685744589235599988589743770344364112057
Q 004637 185 NGSVPDLQRLVLLEELNLGGNDFGPKFP-SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSL 263 (740)
Q Consensus 185 ~~~~p~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l 263 (740)
.. ++.+.+++.|+.|++++|.+....+ ..+++|+.+++++|++.. ++ .+..+.+|+.|++.+|++++.. .+.++
T Consensus 97 ~~-~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~-~l~~~~~L~~L~l~~n~l~~l~--~l~~l 171 (199)
T d2omxa2 97 AD-ITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLNFSSNQVTDLK--PLANL 171 (199)
T ss_dssp CC-CGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCCG--GGTTC
T ss_pred CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CC-CCCCCCCCCCCCCCCCCCCCCC--CCCCC
T ss_conf 22-21111122322211122222232100012236776431111002-34-3332111111223455556770--11679
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 89638954245445347825549999998
Q 004637 264 PSILYLNLAGNQLSEALPVNISCSAKLNF 292 (740)
Q Consensus 264 ~~L~~L~ls~N~l~~~~p~~~~~~~~L~~ 292 (740)
++|+.|++++|++++ ++ .+..+++|+.
T Consensus 172 ~~L~~L~ls~N~i~~-i~-~l~~L~~L~~ 198 (199)
T d2omxa2 172 TTLERLDISSNKVSD-IS-VLAKLTNLES 198 (199)
T ss_dssp TTCCEEECCSSCCCC-CG-GGGGCTTCSE
T ss_pred CCCCEEECCCCCCCC-CC-CCCCCCCCCC
T ss_conf 989999787997998-81-0127899894
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.88 E-value=9.8e-23 Score=132.25 Aligned_cols=153 Identities=18% Similarity=0.223 Sum_probs=83.1
Q ss_pred CCCCEEECCCCCCCCCC-CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC-CCCCCCCCEEE
Q ss_conf 77867552256575678-90124899998787326747422692467999988665128607402899-78999998998
Q 004637 124 SNLKVLSLVSLGLWGPL-PSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELN 201 (740)
Q Consensus 124 ~~L~~L~L~~n~l~g~~-p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~ 201 (740)
+++++|+|++|.+++.+ +..|.++++|+.|+|++|.+.+..+..+..+++|+.|+|++|+++..++. |.++++|++|+
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~ 108 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCC
T ss_conf 78788984898775530200257876272130136322121212221122221010035534434979980797465524
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCC
Q ss_conf 87999999996778898689822685744589235599988589743770344364112057896389542454453478
Q 004637 202 LGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALP 281 (740)
Q Consensus 202 Ls~N~l~~~~p~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p 281 (740)
|++|+++ +..|..|..+.+|+.|+|++|.+.......+. ...++.+.+..|.+....|
T Consensus 109 L~~N~l~---------------------~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~-~~~l~~~~l~~~~~~c~~p 166 (192)
T d1w8aa_ 109 LYDNQIS---------------------CVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF-AEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCSSCCC---------------------EECTTSSTTCTTCCEEECTTCCBCCSGGGHHH-HHHHHHHCCSGGGCBBCSS
T ss_pred CCCCCCC---------------------CCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHH-HHHHHHHCCCCCCEEECCC
T ss_conf 5774535---------------------35977856875334200036443435302777-6423540356898276898
Q ss_pred CCCCCCCCCCEEECCCCCCC
Q ss_conf 25549999998983276363
Q 004637 282 VNISCSAKLNFVEISHNLLI 301 (740)
Q Consensus 282 ~~~~~~~~L~~l~ls~N~l~ 301 (740)
..+ ..++.++++.|.+.
T Consensus 167 ~~l---~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 167 SKV---RDVQIKDLPHSEFK 183 (192)
T ss_dssp TTT---TTSBGGGSCTTTCC
T ss_pred HHH---CCCEEEECCHHHCC
T ss_conf 433---69886144875575
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.87 E-value=3.1e-22 Score=129.67 Aligned_cols=108 Identities=24% Similarity=0.230 Sum_probs=48.6
Q ss_pred CCCCCCCCCCCCCCH-HHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 421002467768771-2263118977867552256575678901248999987873267474226924679999886651
Q 004637 101 SASQQSLSANFNIDR-FFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (740)
Q Consensus 101 ~l~~l~l~~n~~~~~-~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L 179 (740)
.+..|+|++|.+... .+..|.++++|+.|+|++|.+.+..+..+..+++|+.|+|++|++....|..|.++++|+.|+|
T Consensus 30 ~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L 109 (192)
T d1w8aa_ 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCC
T ss_conf 87889848987755302002578762721301363221212122211222210100355344349799807974655245
Q ss_pred CCCCCCCCCCC-CCCCCCCCEEECCCCCCC
Q ss_conf 28607402899-789999989988799999
Q 004637 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFG 208 (740)
Q Consensus 180 ~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~ 208 (740)
++|+|++.+++ |..+++|++|+|++|.+.
T Consensus 110 ~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
T ss_conf 774535359778568753342000364434
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.87 E-value=2.2e-21 Score=125.28 Aligned_cols=182 Identities=21% Similarity=0.191 Sum_probs=135.3
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 86755225657567890124899998787326747422692467999988665128607402899789999989988799
Q 004637 126 LKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGN 205 (740)
Q Consensus 126 L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N 205 (740)
+....+..+.+.+.++. ..+.+|+.|++++|.+. .++ .+..+++|+.|+|++|++++.. .+..+++|++|++++|
T Consensus 26 ~i~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~L~~n~i~~l~-~~~~l~~L~~L~l~~n 100 (210)
T d1h6ta2 26 TIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIK-PLANLKNLGWLFLDEN 100 (210)
T ss_dssp HHHHHTTCSCTTSEECH--HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSS
T ss_pred HHHHHHCCCCCCCCCCH--HHHCCCCEEECCCCCCC-CCH-HHHHCCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCCC
T ss_conf 99998575765775188--79548458978279888-744-4764899898769896025860-1135862120143333
Q ss_pred CCCCCCC-CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 9999996-778898689822685744589235599988589743770344364112057896389542454453478255
Q 004637 206 DFGPKFP-SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284 (740)
Q Consensus 206 ~l~~~~p-~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 284 (740)
+++.... ..+++|+.+++.+|.+.. + ..+..+..++.++++.|.+... ..+..+++|+.+++++|++++. + .+
T Consensus 101 ~i~~l~~l~~l~~L~~L~l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~~--~~~~~l~~L~~l~l~~n~l~~i-~-~l 174 (210)
T d1h6ta2 101 KVKDLSSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI-V-PL 174 (210)
T ss_dssp CCCCGGGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC-G-GG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC-C-CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCC-C-CC
T ss_conf 32122212122211122345653221-1-2201111122211222333454--3100013321001346430256-4-53
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 499999989832763632489885788878403367
Q 004637 285 SCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVST 320 (740)
Q Consensus 285 ~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~~~ 320 (740)
.++++|+.|++++|+++. +| .+..+++++.++++
T Consensus 175 ~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 175 AGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp TTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred CCCCCCCEEECCCCCCCC-CH-HHCCCCCCCEEECC
T ss_conf 678989999897998998-72-11699998999711
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.86 E-value=3.1e-21 Score=124.48 Aligned_cols=181 Identities=22% Similarity=0.277 Sum_probs=134.2
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 97786755225657567890124899998787326747422692467999988665128607402899789999989988
Q 004637 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNL 202 (740)
Q Consensus 123 l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L 202 (740)
+..+..+.+..+.+++.++ ...+.+++.|++++|.+. .++ .+..+++|++|++++|++++..+ +.++++|++|++
T Consensus 17 l~~~i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~-~l~-~l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l 91 (199)
T d2omxa2 17 LAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILM 91 (199)
T ss_dssp HHHHHHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEEC
T ss_pred HHHHHHHHHCCCCCCCCCC--HHHHCCCCEEECCCCCCC-CCC-CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC
T ss_conf 9999999967787788559--879468789989999997-752-02137886757545655667640-167752231111
Q ss_pred CCCCCCCCCC-CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCC
Q ss_conf 7999999996-778898689822685744589235599988589743770344364112057896389542454453478
Q 004637 203 GGNDFGPKFP-SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALP 281 (740)
Q Consensus 203 s~N~l~~~~p-~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p 281 (740)
++|.+....+ ..++.|+.+++++|.+... ..+..+++|+.|++++|++.. ++ .+..+++++.|++++|++++. +
T Consensus 92 ~~n~~~~~~~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~~-~l~~~~~L~~L~l~~n~l~~l-~ 166 (199)
T d2omxa2 92 NNNQIADITPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLNFSSNQVTDL-K 166 (199)
T ss_dssp CSSCCCCCGGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC-G
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHCC-CC-CCCCCCCCCCCCCCCCCCCCC-C
T ss_conf 222222221111122322211122222232--100012236776431111002-34-333211111122345555677-0
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 25549999998983276363248988578887840
Q 004637 282 VNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRT 316 (740)
Q Consensus 282 ~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~ 316 (740)
.+..+++|+.|++++|+++. ++ .+..+++++.
T Consensus 167 -~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~ 198 (199)
T d2omxa2 167 -PLANLTTLERLDISSNKVSD-IS-VLAKLTNLES 198 (199)
T ss_dssp -GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSE
T ss_pred -CCCCCCCCCEEECCCCCCCC-CC-CCCCCCCCCC
T ss_conf -11679989999787997998-81-0127899894
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.85 E-value=3.6e-19 Score=113.78 Aligned_cols=227 Identities=24% Similarity=0.275 Sum_probs=104.7
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC-CCCCEEECCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 788999479998999999985777542100246776877122631189-7786755225657567890124899998787
Q 004637 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKL-SNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (740)
Q Consensus 76 ~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l-~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~ 154 (740)
+++.|++++|.++. ++.. ...+..|++++|.+.. +..+ +.|++|+|++|.+. .+|. ++.++.|+.|+
T Consensus 59 ~L~~L~Ls~N~l~~-lp~~----~~~L~~L~l~~n~l~~-----l~~lp~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~ 126 (353)
T d1jl5a_ 59 HLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA-----LSDLPPLLEYLGVSNNQLE-KLPE-LQNSSFLKIID 126 (353)
T ss_dssp TCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC-----CCSCCTTCCEEECCSSCCS-SCCC-CTTCTTCCEEE
T ss_pred CCCEEECCCCCCCC-CCCC----HHHHHHHHHHHCCCCH-----HHHHCCCCCCCCCCCCCCC-CCCC-HHHHCCCEEEC
T ss_conf 98889899997963-3620----3320332665514320-----3210221111133455432-2210-01101312311
Q ss_pred CCCCCCCCCCC------------------CCCCCCCCCCEEECCCCCCCCC-------------------CCCCCCCCCC
Q ss_conf 32674742269------------------2467999988665128607402-------------------8997899999
Q 004637 155 ISSNFIYGEIP------------------MEITSLKNLKSIVLADNLLNGS-------------------VPDLQRLVLL 197 (740)
Q Consensus 155 Ls~N~l~g~ip------------------~~l~~l~~L~~L~L~~N~l~~~-------------------~p~~~~l~~L 197 (740)
+++|.+....+ ..+..++.++.++++.|.+... ++.+..++.|
T Consensus 127 l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~L 206 (353)
T d1jl5a_ 127 VDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFL 206 (353)
T ss_dssp CCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSSCCCCTTCTTC
T ss_pred CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 35651001322333321000012222233320001222001112334432222122222233444322221223455533
Q ss_pred CEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC----------------CCHHHC
Q ss_conf 8998879999999967788986898226857445892355999885897437703443----------------641120
Q 004637 198 EELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGP----------------IQSFLF 261 (740)
Q Consensus 198 ~~L~Ls~N~l~~~~p~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~----------------~p~~~~ 261 (740)
+.+++++|.... ++....++..+.+..|.+.. .+.. ...+...++..|.+.+. ++....
T Consensus 207 ~~l~l~~n~~~~-~~~~~~~l~~~~~~~~~~~~-~~~~---~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 281 (353)
T d1jl5a_ 207 TTIYADNNLLKT-LPDLPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCD 281 (353)
T ss_dssp CEEECCSSCCSS-CCSCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECC
T ss_pred CCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCC-CCCC---CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC
T ss_conf 312225422234-55323343332223333344-4333---443222222223332223453000123333575323456
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 578963895424544534782554999999898327636324898857888784033677778898
Q 004637 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (740)
Q Consensus 262 ~l~~L~~L~ls~N~l~~~~p~~~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~l~~l~~~~N~l~~~ 327 (740)
.+++|++|++++|+++ .+|.. +++|+.|++++|+|+ .+|.. ..+++.+++++|.++..
T Consensus 282 ~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~~l 339 (353)
T d1jl5a_ 282 LPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLREF 339 (353)
T ss_dssp CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSSC
T ss_pred CCCCCCEEECCCCCCC-CCCCC---CCCCCEEECCCCCCC-CCCCC---CCCCCEEECCCCCCCCC
T ss_conf 6898898979799168-35665---487998989999687-54532---28889898769918977
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.82 E-value=1.5e-17 Score=105.34 Aligned_cols=160 Identities=22% Similarity=0.224 Sum_probs=67.7
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 77867552256575678901248999987873267474226924679999886651286074028997899999899887
Q 004637 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLG 203 (740)
Q Consensus 124 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls 203 (740)
++|++|+|++|.++ .+|.. +.+|+.|++++|.++ .++.. .+.|++|++++|.+.. +|.++.+++|+.|+++
T Consensus 58 ~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~~n~l~~-lp~~~~l~~L~~L~l~ 128 (353)
T d1jl5a_ 58 PHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSNNQLEK-LPELQNSSFLKIIDVD 128 (353)
T ss_dssp TTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCSC---CTTCCEEECCSSCCSS-CCCCTTCTTCCEEECC
T ss_pred CCCCEEECCCCCCC-CCCCC---HHHHHHHHHHHCCCC-HHHHH---CCCCCCCCCCCCCCCC-CCCHHHHCCCEEECCC
T ss_conf 89888989999796-33620---332033266551432-03210---2211111334554322-2100110131231135
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 99999999677889868982268574458923559998858974377034436411205789638954245445347825
Q 004637 204 GNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVN 283 (740)
Q Consensus 204 ~N~l~~~~p~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 283 (740)
+|.+... +.....+..+.+..+... ....+..+..++.++++.|.+...... ......+...++.+. .++ .
T Consensus 129 ~~~~~~~-~~~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~~~~~----~~~~~~l~~~~~~~~-~~~-~ 199 (353)
T d1jl5a_ 129 NNSLKKL-PDLPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKKLPDL----PLSLESIVAGNNILE-ELP-E 199 (353)
T ss_dssp SSCCSCC-CCCCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSSCCCC----CTTCCEEECCSSCCS-SCC-C
T ss_pred CCCCCCC-CCCCCCCCCHHHCCCCCC--CCCCCCCCCCCEECCCCCCCCCCCCCC----CCCCCCCCCCCCCCC-CCC-C
T ss_conf 6510013-223333210000122222--333200012220011123344322221----222222334443222-212-2
Q ss_pred CCCCCCCCEEECCCCCCC
Q ss_conf 549999998983276363
Q 004637 284 ISCSAKLNFVEISHNLLI 301 (740)
Q Consensus 284 ~~~~~~L~~l~ls~N~l~ 301 (740)
+..++.++.+++++|...
T Consensus 200 ~~~l~~L~~l~l~~n~~~ 217 (353)
T d1jl5a_ 200 LQNLPFLTTIYADNNLLK 217 (353)
T ss_dssp CTTCTTCCEEECCSSCCS
T ss_pred CCCCCCCCCCCCCCCCCC
T ss_conf 345553331222542223
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.74 E-value=1.7e-19 Score=115.46 Aligned_cols=226 Identities=18% Similarity=0.122 Sum_probs=130.5
Q ss_pred CCCCCCCCCCCCCCH----HHHHHCCCCCCCEEECCCCCCCCC----------CCCCCCCCCCCCEEECCCCCCCCC---
Q ss_conf 421002467768771----226311897786755225657567----------890124899998787326747422---
Q 004637 101 SASQQSLSANFNIDR----FFTILTKLSNLKVLSLVSLGLWGP----------LPSKINRFWSLEVLNISSNFIYGE--- 163 (740)
Q Consensus 101 ~l~~l~l~~n~~~~~----~~~~l~~l~~L~~L~L~~n~l~g~----------~p~~l~~l~~L~~L~Ls~N~l~g~--- 163 (740)
.+..++|++|.+... +...+...+.|+.|+++++..... +...+...++|+.|+|++|.+...
T Consensus 32 ~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 111 (344)
T d2ca6a1 32 SVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQE 111 (344)
T ss_dssp CCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHH
T ss_pred CCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 97889784983778999999999985899888888777543345421067879998875477756330000134554333
Q ss_pred -CCCCCCCCCCCCEEECCCCCCCCCCC--------------CCCCCCCCCEEECCCCCCCCCCCC-------CCCCCCEE
Q ss_conf -69246799998866512860740289--------------978999998998879999999967-------78898689
Q 004637 164 -IPMEITSLKNLKSIVLADNLLNGSVP--------------DLQRLVLLEELNLGGNDFGPKFPS-------LSKNIVSV 221 (740)
Q Consensus 164 -ip~~l~~l~~L~~L~L~~N~l~~~~p--------------~~~~l~~L~~L~Ls~N~l~~~~p~-------~~~~L~~L 221 (740)
+...+...++|+.|++++|.+...-. .....+.|+.+++++|.++..... ..+.++.+
T Consensus 112 ~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L 191 (344)
T d2ca6a1 112 PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTV 191 (344)
T ss_dssp HHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEE
T ss_pred CHHHHHCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCC
T ss_conf 10111002343210000024666654311112122221100014676421110136501355433221111233321335
Q ss_pred ECCCCCCCCC-----CCCCCCCCCCCCEEECCCCCCCCC----CCHHHCCCCCCCEEECCCCCCCCCCCCC----CC--C
Q ss_conf 8226857445-----892355999885897437703443----6411205789638954245445347825----54--9
Q 004637 222 ILRNNSLRSE-----IPSGLKNFDQLKQFDISSNNFVGP----IQSFLFSLPSILYLNLAGNQLSEALPVN----IS--C 286 (740)
Q Consensus 222 ~l~~N~l~g~-----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~~~~p~~----~~--~ 286 (740)
++.+|+++.. +...+..+++|+.|+|++|.+... +...+...++|+.|++++|.+++.-... +. .
T Consensus 192 ~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~ 271 (344)
T d2ca6a1 192 KMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLE 271 (344)
T ss_dssp ECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCS
T ss_pred CCCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCC
T ss_conf 43332222222320024332110121122233332222222234443323221111030047567156678887763156
Q ss_pred CCCCCEEECCCCCCCCC----CCCCCC-CCCCCCEEECCCCCCCC
Q ss_conf 99999898327636324----898857-88878403367777889
Q 004637 287 SAKLNFVEISHNLLIGK----LPSCIG-SNSLNRTVVSTWNCLSG 326 (740)
Q Consensus 287 ~~~L~~l~ls~N~l~g~----~p~~~~-~~~~l~~l~~~~N~l~~ 326 (740)
...|+.||+++|++... +...+. ..+.++.+++++|.++.
T Consensus 272 ~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 272 NIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp SCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCC
T ss_conf 888898989898698089999999997038999989787980898
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=6.3e-18 Score=107.33 Aligned_cols=128 Identities=18% Similarity=0.182 Sum_probs=64.4
Q ss_pred HCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC-CCCCCCCC
Q ss_conf 11897786755225657567890124899998787326747422692467999988665128607402899-78999998
Q 004637 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLE 198 (740)
Q Consensus 120 l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~ 198 (740)
+.+...|+.|+|++|+++ .+|..+..+++|+.|+|++|.++ .++ .+..+++|+.|++++|+++...+. +..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCCCCCCCEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCC-CCC-CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 168574848978899788-65762004145998989799787-647-744576130643102134577763223345344
Q ss_pred EEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC---CHHHCCCCCCCEEE
Q ss_conf 9988799999999677889868982268574458923559998858974377034436---41120578963895
Q 004637 199 ELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI---QSFLFSLPSILYLN 270 (740)
Q Consensus 199 ~L~Ls~N~l~~~~p~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~---p~~~~~l~~L~~L~ 270 (740)
.|++++|++.... .+ ..+..+++|+.|++++|.+.... +..+..+++|+.||
T Consensus 91 ~L~L~~N~i~~~~-------------------~l-~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 91 ELILTNNSLVELG-------------------DL-DPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp EEECCSCCCCCGG-------------------GG-GGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred CCEECCCCCCCCC-------------------CC-CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCEEC
T ss_conf 3420300016654-------------------21-1001365320664079963456106999998789958337
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=4.5e-19 Score=113.26 Aligned_cols=177 Identities=16% Similarity=0.166 Sum_probs=105.9
Q ss_pred CCCCCCEEECCCCCCCCC-CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCC-CCCCC-CCC-CCCCCCC
Q ss_conf 897786755225657567-8901248999987873267474226924679999886651286-07402-899-7899999
Q 004637 122 KLSNLKVLSLVSLGLWGP-LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN-LLNGS-VPD-LQRLVLL 197 (740)
Q Consensus 122 ~l~~L~~L~L~~n~l~g~-~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N-~l~~~-~p~-~~~l~~L 197 (740)
....|++|+|+++.+... ++..+.++++|++|+|+++.+++..+..++.+++|+.|+|+++ .++.. ... ...+++|
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L 123 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred CCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
T ss_conf 67878878898984577799999974877651452346798678999851899757151001341235540365788743
Q ss_pred CEEECCCC-CCCCC-----CCCCCCCCCEEECCCC--CCCCC-CCCCCCCCCCCCEEECCCC-CCCCCCCHHHCCCCCCC
Q ss_conf 89988799-99999-----9677889868982268--57445-8923559998858974377-03443641120578963
Q 004637 198 EELNLGGN-DFGPK-----FPSLSKNIVSVILRNN--SLRSE-IPSGLKNFDQLKQFDISSN-NFVGPIQSFLFSLPSIL 267 (740)
Q Consensus 198 ~~L~Ls~N-~l~~~-----~p~~~~~L~~L~l~~N--~l~g~-~p~~~~~l~~L~~L~l~~N-~l~g~~p~~~~~l~~L~ 267 (740)
++|+++++ .++.. +....++|+.|.+.++ .++.. +...+.++++|+.|++++| .+++.....+.++++|+
T Consensus 124 ~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~ 203 (284)
T d2astb2 124 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 203 (284)
T ss_dssp CEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 56522453323332200010001111101221355424444434342323222123553223477830333321357687
Q ss_pred EEECCC-CCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 895424-5445347825549999998983276
Q 004637 268 YLNLAG-NQLSEALPVNISCSAKLNFVEISHN 298 (740)
Q Consensus 268 ~L~ls~-N~l~~~~p~~~~~~~~L~~l~ls~N 298 (740)
+|++++ +.+++.....+..+++|+.|+++++
T Consensus 204 ~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 204 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EEECCCCCCCCHHHHHHHHCCCCCCEEEEECC
T ss_conf 79899999787378999726999898964488
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=2.6e-18 Score=109.31 Aligned_cols=174 Identities=15% Similarity=0.180 Sum_probs=67.7
Q ss_pred CCCCCEEECCCCCCCCC-CCCCCCCCCCCCEEECCCCCCCCCCC-CCCCCCCCCEEECCCC-CCCCC-C---CCCCCCCC
Q ss_conf 99998787326747422-69246799998866512860740289-9789999989988799-99999-9---67788986
Q 004637 147 FWSLEVLNISSNFIYGE-IPMEITSLKNLKSIVLADNLLNGSVP-DLQRLVLLEELNLGGN-DFGPK-F---PSLSKNIV 219 (740)
Q Consensus 147 l~~L~~L~Ls~N~l~g~-ip~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N-~l~~~-~---p~~~~~L~ 219 (740)
..+|++||++++.++.. ++..+..+++|++|+|+++.+++..+ .+.++++|++|+++++ .++.. + ...+++|+
T Consensus 45 ~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~ 124 (284)
T d2astb2 45 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 124 (284)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
T ss_conf 78788788989845777999999748776514523467986789998518997571510013412355403657887435
Q ss_pred EEECCCC-CCCCC-CCCCCC-CCCCCCEEECCCC--CCCCC-CCHHHCCCCCCCEEECCCC-CCCCCCCCCCCCCCCCCE
Q ss_conf 8982268-57445-892355-9998858974377--03443-6411205789638954245-445347825549999998
Q 004637 220 SVILRNN-SLRSE-IPSGLK-NFDQLKQFDISSN--NFVGP-IQSFLFSLPSILYLNLAGN-QLSEALPVNISCSAKLNF 292 (740)
Q Consensus 220 ~L~l~~N-~l~g~-~p~~~~-~l~~L~~L~l~~N--~l~g~-~p~~~~~l~~L~~L~ls~N-~l~~~~p~~~~~~~~L~~ 292 (740)
.|+++++ +++.. +...+. .++.|+.|++++. .++.. +.....++++|+.|++++| .+++.....+..+++|++
T Consensus 125 ~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~ 204 (284)
T d2astb2 125 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 204 (284)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred CCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCE
T ss_conf 65224533233322000100011111012213554244444343423232221235532234778303333213576877
Q ss_pred EECCC-CCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 98327-63632489885788878403367
Q 004637 293 VEISH-NLLIGKLPSCIGSNSLNRTVVST 320 (740)
Q Consensus 293 l~ls~-N~l~g~~p~~~~~~~~l~~l~~~ 320 (740)
|++++ +.++......+..++.++.+++.
T Consensus 205 L~L~~C~~i~~~~l~~L~~~~~L~~L~l~ 233 (284)
T d2astb2 205 LSLSRCYDIIPETLLELGEIPTLKTLQVF 233 (284)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECT
T ss_pred EECCCCCCCCHHHHHHHHCCCCCCEEEEE
T ss_conf 98999997873789997269998989644
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.71 E-value=5.3e-17 Score=102.54 Aligned_cols=104 Identities=22% Similarity=0.295 Sum_probs=60.3
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 67552256575678901248999987873267474226924679999886651286074028997899999899887999
Q 004637 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGND 206 (740)
Q Consensus 127 ~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~ 206 (740)
++|+|++|+++ .+| .++.++.|++|++++|.++ .+|+.++.+++|+.|++++|+++.. |++.++++|++|++++|+
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-DGVANLPRLQELLLCNNR 76 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCSSCCEEECCSSC
T ss_pred CEEECCCCCCC-CCC-CCCCCCCCCEEECCCCCCC-CCHHHHHHHHCCCCCCCCCCCCCCC-CCCCCCCCCCEEECCCCC
T ss_conf 98986899898-871-0105898898979787168-6521565543135453243211235-741233555768888986
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 999996778898689822685744589235599988589743770344
Q 004637 207 FGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (740)
Q Consensus 207 l~~~~p~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 254 (740)
++... ....+..+++|+.|++++|.+..
T Consensus 77 i~~~~--------------------~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 77 LQQSA--------------------AIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCSSS--------------------TTGGGGGCTTCCEEECTTSGGGG
T ss_pred CCCCC--------------------CCHHHCCCCCCCEEECCCCCCCC
T ss_conf 58888--------------------82565379999999897996886
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=2.3e-19 Score=114.77 Aligned_cols=108 Identities=22% Similarity=0.267 Sum_probs=63.7
Q ss_pred CCCCCCCCCCCCCCH-HHHHHCCCCCCCEEECCCCCCCC----CCCCCCCCCCCCCEEECCCCCCCCC----CCCCCC-C
Q ss_conf 421002467768771-22631189778675522565756----7890124899998787326747422----692467-9
Q 004637 101 SASQQSLSANFNIDR-FFTILTKLSNLKVLSLVSLGLWG----PLPSKINRFWSLEVLNISSNFIYGE----IPMEIT-S 170 (740)
Q Consensus 101 ~l~~l~l~~n~~~~~-~~~~l~~l~~L~~L~L~~n~l~g----~~p~~l~~l~~L~~L~Ls~N~l~g~----ip~~l~-~ 170 (740)
.+..++++.|.+.+. +...+..+++|++|+|++|+++- .++..+..+++|+.|||++|.++.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCC
T ss_conf 87779820895886899999976779999982899998899999999985399988897959859728999999998437
Q ss_pred CCCCCEEECCCCCCCCC----CC-CCCCCCCCCEEECCCCCCC
Q ss_conf 99988665128607402----89-9789999989988799999
Q 004637 171 LKNLKSIVLADNLLNGS----VP-DLQRLVLLEELNLGGNDFG 208 (740)
Q Consensus 171 l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~Ls~N~l~ 208 (740)
..+|+.|+|++|+++.. ++ .+..+++|++|++++|.++
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCH
T ss_conf 8877887788877543221012110000343200244433202
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=3.5e-17 Score=103.47 Aligned_cols=132 Identities=17% Similarity=0.115 Sum_probs=94.4
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 78901248999987873267474226924679999886651286074028997899999899887999999996778898
Q 004637 139 PLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNI 218 (740)
Q Consensus 139 ~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L 218 (740)
..| .+.+..+|+.|+|++|.|+ .+|..+..+++|+.|+|++|.++.. +.+..+++|++|++++|.++.
T Consensus 10 ~~~-~~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l-~~~~~l~~L~~L~ls~N~i~~--------- 77 (162)
T d1a9na_ 10 QAA-QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICR--------- 77 (162)
T ss_dssp TSC-EEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCE---------
T ss_pred HHH-HCCCCCCCCEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCHHHHHCCCCCCCC---------
T ss_conf 117-5168574848978899788-6576200414599898979978764-774457613064310213457---------
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC-HHHCCCCCCCEEECCCCCCCCCCCC----CCCCCCCCCEE
Q ss_conf 689822685744589235599988589743770344364-1120578963895424544534782----55499999989
Q 004637 219 VSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ-SFLFSLPSILYLNLAGNQLSEALPV----NISCSAKLNFV 293 (740)
Q Consensus 219 ~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~~~~p~----~~~~~~~L~~l 293 (740)
..+..+..+++|+.|++++|++..... ..+..+++|+.+++++|.++. .|. .+..+++|++|
T Consensus 78 ------------l~~~~~~~l~~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~-~~~~r~~~i~~lp~L~~L 144 (162)
T d1a9na_ 78 ------------IGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVL 144 (162)
T ss_dssp ------------ECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEE
T ss_pred ------------CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC-CCCHHHHHHHHCCCCCEE
T ss_conf ------------7763223345344342030001665421100136532066407996345-610699999878995833
Q ss_pred EC
Q ss_conf 83
Q 004637 294 EI 295 (740)
Q Consensus 294 ~l 295 (740)
|-
T Consensus 145 D~ 146 (162)
T d1a9na_ 145 DF 146 (162)
T ss_dssp TT
T ss_pred CC
T ss_conf 79
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.68 E-value=9.6e-17 Score=101.20 Aligned_cols=103 Identities=25% Similarity=0.365 Sum_probs=50.6
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 87873267474226924679999886651286074028997899999899887999999996778898689822685744
Q 004637 151 EVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS 230 (740)
Q Consensus 151 ~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L~l~~N~l~g 230 (740)
++|+|++|+++ .+| .+..+++|++|++++|+++..++.+..+++|+.|++++|.++.
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~--------------------- 57 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN--------------------- 57 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC---------------------
T ss_pred CEEECCCCCCC-CCC-CCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC---------------------
T ss_conf 98986899898-871-0105898898979787168652156554313545324321123---------------------
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCC-CHHHCCCCCCCEEECCCCCCCC
Q ss_conf 58923559998858974377034436-4112057896389542454453
Q 004637 231 EIPSGLKNFDQLKQFDISSNNFVGPI-QSFLFSLPSILYLNLAGNQLSE 278 (740)
Q Consensus 231 ~~p~~~~~l~~L~~L~l~~N~l~g~~-p~~~~~l~~L~~L~ls~N~l~~ 278 (740)
+| .+..+++|+.|++++|++.... ...+..+++|+.+++++|+++.
T Consensus 58 -l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 58 -VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp -CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred -CC-CCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCC
T ss_conf -57-412335557688889865888882565379999999897996886
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=3.1e-18 Score=108.94 Aligned_cols=111 Identities=17% Similarity=0.130 Sum_probs=52.0
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----HHHHHHCCCCCCCEEECCCCCCCCC----CCCCCCC-
Q ss_conf 788999479998999999985777542100246776877----1226311897786755225657567----8901248-
Q 004637 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNID----RFFTILTKLSNLKVLSLVSLGLWGP----LPSKINR- 146 (740)
Q Consensus 76 ~v~~l~l~~~~l~~~~~~~~~~~~~~l~~l~l~~n~~~~----~~~~~l~~l~~L~~L~L~~n~l~g~----~p~~l~~- 146 (740)
+++.|+++.++++...-....-....++.++|++|.+.. .+...+..+++|+.|+|++|.++.. +...+..
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCC
T ss_conf 87779820895886899999976779999982899998899999999985399988897959859728999999998437
Q ss_pred CCCCCEEECCCCCCCCC----CCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 99998787326747422----69246799998866512860740
Q 004637 147 FWSLEVLNISSNFIYGE----IPMEITSLKNLKSIVLADNLLNG 186 (740)
Q Consensus 147 l~~L~~L~Ls~N~l~g~----ip~~l~~l~~L~~L~L~~N~l~~ 186 (740)
..+|+.|+|++|.++.. ++..+..+++|+.|+|++|.++.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHH
T ss_conf 88778877888775432210121100003432002444332023
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.66 E-value=3.2e-17 Score=103.65 Aligned_cols=209 Identities=19% Similarity=0.218 Sum_probs=103.9
Q ss_pred HHHHCCCCCCCEEECCCCCCCCC----CCCCCCCCCCCCEEECCCCCCCCC----------CCCCCCCCCCCCEEECCCC
Q ss_conf 26311897786755225657567----890124899998787326747422----------6924679999886651286
Q 004637 117 FTILTKLSNLKVLSLVSLGLWGP----LPSKINRFWSLEVLNISSNFIYGE----------IPMEITSLKNLKSIVLADN 182 (740)
Q Consensus 117 ~~~l~~l~~L~~L~L~~n~l~g~----~p~~l~~l~~L~~L~Ls~N~l~g~----------ip~~l~~l~~L~~L~L~~N 182 (740)
...+.+...|+.|+|++|.++.. +-..+...+.|+.|+++.+.+... +...+..+++|+.|+|++|
T Consensus 24 ~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n 103 (344)
T d2ca6a1 24 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 103 (344)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99996389978897849837789999999999858998888887775433454210678799988754777563300001
Q ss_pred CCCCCCC-----CCCCCCCCCEEECCCCCCCCCCC----------------CCCCCCCEEECCCCCCCCC----CCCCCC
Q ss_conf 0740289-----97899999899887999999996----------------7788986898226857445----892355
Q 004637 183 LLNGSVP-----DLQRLVLLEELNLGGNDFGPKFP----------------SLSKNIVSVILRNNSLRSE----IPSGLK 237 (740)
Q Consensus 183 ~l~~~~p-----~~~~l~~L~~L~Ls~N~l~~~~p----------------~~~~~L~~L~l~~N~l~g~----~p~~~~ 237 (740)
.++..-. .+..+++|++|++++|.++..-. ...+.|+.+.++.|+++.. +...+.
T Consensus 104 ~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~ 183 (344)
T d2ca6a1 104 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ 183 (344)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHH
T ss_conf 34554333101110023432100000246666543111121222211000146764211101365013554332211112
Q ss_pred CCCCCCEEECCCCCCCCC-----CCHHHCCCCCCCEEECCCCCCCCC----CCCCCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 999885897437703443-----641120578963895424544534----78255499999989832763632489885
Q 004637 238 NFDQLKQFDISSNNFVGP-----IQSFLFSLPSILYLNLAGNQLSEA----LPVNISCSAKLNFVEISHNLLIGKLPSCI 308 (740)
Q Consensus 238 ~l~~L~~L~l~~N~l~g~-----~p~~~~~l~~L~~L~ls~N~l~~~----~p~~~~~~~~L~~l~ls~N~l~g~~p~~~ 308 (740)
.+..|+.|++++|++... +...+...++|+.|++++|.++.. +...+..+++|++|++++|.+.+.-...+
T Consensus 184 ~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l 263 (344)
T d2ca6a1 184 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAV 263 (344)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHH
T ss_conf 33321335433322222223200243321101211222333322222222344433232211110300475671566788
Q ss_pred ----C--CCCCCCEEECCCCCCC
Q ss_conf ----7--8887840336777788
Q 004637 309 ----G--SNSLNRTVVSTWNCLS 325 (740)
Q Consensus 309 ----~--~~~~l~~l~~~~N~l~ 325 (740)
. ....++.+++++|.++
T Consensus 264 ~~~l~~~~~~~L~~L~ls~N~i~ 286 (344)
T d2ca6a1 264 VDAFSKLENIGLQTLRLQYNEIE 286 (344)
T ss_dssp HHHHHTCSSCCCCEEECCSSCCB
T ss_pred HHHHHHCCCCCCCEEECCCCCCC
T ss_conf 87763156888898989898698
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.65 E-value=2.7e-19 Score=114.45 Aligned_cols=112 Identities=25% Similarity=0.289 Sum_probs=43.6
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEE
Q ss_conf 01248999987873267474226924679999886651286074028997899999899887999999996778898689
Q 004637 142 SKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSV 221 (740)
Q Consensus 142 ~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~L~~L 221 (740)
..+..+++|+.|+|++|.++ .++ .+.++++|+.|+|++|.++...+.+..++.|++|++++|+++.
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~~------------ 107 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS------------ 107 (198)
T ss_dssp HHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECCC------------
T ss_pred HHHHCCCCCCEEECCCCCCC-CCC-CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------------
T ss_conf 67762604615199446899-864-4247825357341353432100003322123333333322222------------
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC-HHHCCCCCCCEEECCCCCCCC
Q ss_conf 822685744589235599988589743770344364-112057896389542454453
Q 004637 222 ILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ-SFLFSLPSILYLNLAGNQLSE 278 (740)
Q Consensus 222 ~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~~ 278 (740)
+ ..+..+++|+.|++++|+++.... ..+..+++|+.|++++|.+..
T Consensus 108 ----------l-~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~ 154 (198)
T d1m9la_ 108 ----------L-SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp ----------H-HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred ----------C-CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCCCCCC
T ss_conf ----------2-2222222341112341021255422123677763023427984346
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.62 E-value=1.3e-18 Score=110.82 Aligned_cols=118 Identities=19% Similarity=0.241 Sum_probs=73.7
Q ss_pred HHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 12263118977867552256575678901248999987873267474226924679999886651286074028997899
Q 004637 115 RFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRL 194 (740)
Q Consensus 115 ~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~l 194 (740)
.++..+..+++|+.|+|++|.+. .++ .+..+++|+.|+|++|.++ .+|.....+++|+.|++++|+++.. +.+..+
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l-~~~~~l 114 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL-SGIEKL 114 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH-HHHHHH
T ss_pred HHHHHHHCCCCCCEEECCCCCCC-CCC-CCCCCCCCCCHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCC
T ss_conf 02467762604615199446899-864-4247825357341353432-1000033221233333333222222-222222
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
Q ss_conf 99989988799999999677889868982268574458923559998858974377034436
Q 004637 195 VLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI 256 (740)
Q Consensus 195 ~~L~~L~Ls~N~l~~~~p~~~~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 256 (740)
++|+.|++++|+++... . -..+..+++|+.|++++|.+....
T Consensus 115 ~~L~~L~L~~N~i~~~~-------------------~-~~~l~~l~~L~~L~L~~N~l~~~~ 156 (198)
T d1m9la_ 115 VNLRVLYMSNNKITNWG-------------------E-IDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp HHSSEEEESEEECCCHH-------------------H-HHHHTTTTTCSEEEECSSHHHHHH
T ss_pred CCCCCCCCCCCHHCCCC-------------------C-CCCCCCCCCCCEEECCCCCCCCCC
T ss_conf 23411123410212554-------------------2-212367776302342798434676
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=3.8e-14 Score=87.69 Aligned_cols=89 Identities=21% Similarity=0.101 Sum_probs=46.9
Q ss_pred HHCCCCCCCEEECCCCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 31189778675522565-75678901248999987873267474226924679999886651286074028997899999
Q 004637 119 ILTKLSNLKVLSLVSLG-LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLL 197 (740)
Q Consensus 119 ~l~~l~~L~~L~L~~n~-l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L 197 (740)
.+..+++|+.|+|.+|+ +...-+..|.++++|+.|+|++|+|+...|..|..+++|+.|+|++|+|+..+++......|
T Consensus 26 ~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~~~l 105 (156)
T d2ifga3 26 HLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSL 105 (156)
T ss_dssp TSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCCC
T ss_pred CCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHCCCCC
T ss_conf 02576565743168986644369212256666672162021247742011124554333322678785157456335321
Q ss_pred CEEECCCCCC
Q ss_conf 8998879999
Q 004637 198 EELNLGGNDF 207 (740)
Q Consensus 198 ~~L~Ls~N~l 207 (740)
+.|+|++|.+
T Consensus 106 ~~L~L~~Np~ 115 (156)
T d2ifga3 106 QELVLSGNPL 115 (156)
T ss_dssp CEEECCSSCC
T ss_pred CCCCCCCCCC
T ss_conf 2433579863
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=4.4e-14 Score=87.41 Aligned_cols=79 Identities=19% Similarity=0.124 Sum_probs=38.9
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCEEECCCCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCC-CCCCCCCCEEECCCCC
Q ss_conf 5522565756789012489999878732674-7422692467999988665128607402899-7899999899887999
Q 004637 129 LSLVSLGLWGPLPSKINRFWSLEVLNISSNF-IYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGND 206 (740)
Q Consensus 129 L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~-l~g~ip~~l~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~ 206 (740)
++..++++ ...|..+..+++|+.|++++|+ +...-+..|.++++|+.|+|++|+|+...+. |..+++|++|+|++|+
T Consensus 13 l~c~~~~~-~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~ 91 (156)
T d2ifga3 13 LRCTRDGA-LDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (156)
T ss_dssp EECCSSCC-CTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EEECCCCC-CCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCC
T ss_conf 98528997-65860025765657431689866443692122566666721620212477420111245543333226787
Q ss_pred CC
Q ss_conf 99
Q 004637 207 FG 208 (740)
Q Consensus 207 l~ 208 (740)
++
T Consensus 92 l~ 93 (156)
T d2ifga3 92 LE 93 (156)
T ss_dssp CS
T ss_pred CC
T ss_conf 85
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=99.01 E-value=2.5e-09 Score=62.69 Aligned_cols=148 Identities=10% Similarity=0.074 Sum_probs=89.8
Q ss_pred HHHHHHHCCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCC-CCCCCEEECEEEEECCC
Q ss_conf 89999844999999232078740899883499899999953124557368999999986016-86411131033530358
Q 004637 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQD 522 (740)
Q Consensus 444 ~~l~~~~~~f~~~~~lG~G~~g~Vyk~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~ 522 (740)
.++....+.|......+-++...||+... +++.+.+|+...........+.+|...+..+. +--+.+++.++.
T Consensus 7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~----- 80 (263)
T d1j7la_ 7 PELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER----- 80 (263)
T ss_dssp HHHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-----
T ss_pred HHHHHHHHCEEEEECCCCCCCCCEEEEEE-CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEE-----
T ss_conf 99997513527997678998771899990-898699998488765325569999999998760699872899975-----
Q ss_pred CCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC--------------------------
Q ss_conf 999997269998424576400110123678878999999999999999999871--------------------------
Q 004637 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT-------------------------- 576 (740)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-------------------------- 576 (740)
.++..++||+++++..+.+.... . .. ...++.++++.+..||.
T Consensus 81 ---~~~~~~lv~~~l~G~~~~~~~~~---~--~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (263)
T d1j7la_ 81 ---HDGWSNLLMSEADGVLCSEEYED---E--QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNND 149 (263)
T ss_dssp ---ETTEEEEEEECCSSEEHHHHTTT---C--SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTT
T ss_pred ---CCCCEEEEEEECCCCCCCCCCCC---C--CC---HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf ---08964999986043343543344---0--26---9999998999999985568421435764465655577899877
Q ss_pred ---------------------------C---CCCCCEECCCCCCCEEECCCCCEEEECCCCC
Q ss_conf ---------------------------9---9998020388899511149992447058998
Q 004637 577 ---------------------------G---VAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 577 ---------------------------~---~~~~iiHrDlk~~NILld~~~~~kl~DFGl~ 608 (740)
. ....++|+|+.+.||+++++...-+.||+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a 211 (263)
T d1j7la_ 150 LADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp CSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCCEEEEEECHHC
T ss_conf 65555430332320057999999998449867817898600476423649965999602314
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.84 E-value=6.2e-11 Score=71.05 Aligned_cols=15 Identities=33% Similarity=0.430 Sum_probs=5.1
Q ss_pred CCCCCEEECCCCCCC
Q ss_conf 999886651286074
Q 004637 171 LKNLKSIVLADNLLN 185 (740)
Q Consensus 171 l~~L~~L~L~~N~l~ 185 (740)
+++|+.|+|++|+++
T Consensus 64 ~~~L~~L~Ls~N~i~ 78 (162)
T d1koha1 64 IPELLSLNLSNNRLY 78 (162)
T ss_dssp CTTCCCCCCCSSCCC
T ss_pred CCCCCEEECCCCCCC
T ss_conf 878788637776666
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.64 E-value=3e-09 Score=62.29 Aligned_cols=41 Identities=24% Similarity=0.333 Sum_probs=16.2
Q ss_pred CCCCCCCEEECCCCCCCCC--CCCCCCCCCCCCEEECCCCCCC
Q ss_conf 1897786755225657567--8901248999987873267474
Q 004637 121 TKLSNLKVLSLVSLGLWGP--LPSKINRFWSLEVLNISSNFIY 161 (740)
Q Consensus 121 ~~l~~L~~L~L~~n~l~g~--~p~~l~~l~~L~~L~Ls~N~l~ 161 (740)
..+++|++|+|++|.++.. ++..+..+++|+.|+|++|.++
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~ 104 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 104 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC
T ss_pred HHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 7487878863777666677315889865885610004357213
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.54 E-value=1.5e-06 Score=48.28 Aligned_cols=139 Identities=11% Similarity=0.008 Sum_probs=75.8
Q ss_pred EECCCC-CCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCC--CCEEECEEEEECCCCCCCCCCEEEEEE
Q ss_conf 320787-40899883499899999953124557368999999986016864--111310335303589999972699984
Q 004637 459 IGEGSQ-GQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH--LVSILGHCILTYQDHPNTGSTVFLVLE 535 (740)
Q Consensus 459 lG~G~~-g~Vyk~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~~~~~~~~~~~~~~~~~lv~E 535 (740)
+..|.. ..||+....++..+.+|...... ...+..|...++.+.... +.++++++. ++...++|||
T Consensus 18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~--------~~~~~~~v~~ 86 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVT--------EAGRDWLLLG 86 (255)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEE--------CSSCEEEEEE
T ss_pred CCCCCCCCEEEEEEECCCCEEEEEECCCCC---HHHHHHHHHHHHHHHHCCCCCCCEEEECC--------CCCCEEEEEE
T ss_conf 678654775899993898789999589667---76899999999999865999886132224--------5661599987
Q ss_pred CCCCCCHHHHC-----------------CCCC-CCCC--CCHHHHHHHHHH--------------------HHHHHHHHH
Q ss_conf 24576400110-----------------1236-7887--899999999999--------------------999999987
Q 004637 536 HISNGSLRDYL-----------------TDWK-KKDM--LKWPQRMAIIIG--------------------ATRGVQFLH 575 (740)
Q Consensus 536 y~~~GsL~~~l-----------------~~~~-~~~~--l~~~~~~~i~~~--------------------ia~gL~yLH 575 (740)
|+++-++.+.. |... .... -.+......... ....+..+.
T Consensus 87 ~i~G~~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (255)
T d1nd4a_ 87 EVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 166 (255)
T ss_dssp CCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 44135543221268999999999999873688544887554124688999999875411011340112137999999998
Q ss_pred CC----CCCCCEECCCCCCCEEECCCCCEEEECCCCC
Q ss_conf 19----9998020388899511149992447058998
Q 004637 576 TG----VAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 576 ~~----~~~~iiHrDlk~~NILld~~~~~kl~DFGl~ 608 (740)
.. ..+.++|+|+.+.||+++.+..+.+.||+.+
T Consensus 167 ~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~ 203 (255)
T d1nd4a_ 167 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRL 203 (255)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred HHCCCCCCCEEEECCCCCCCEEEECCCEEEEEECHHC
T ss_conf 7187657956786788876357737965899985332
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=98.23 E-value=3.8e-05 Score=41.02 Aligned_cols=167 Identities=11% Similarity=0.082 Sum_probs=83.1
Q ss_pred CCCCHHHHHHHHCCCC--C-CCEEECCC-CCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEC
Q ss_conf 8889989999844999--9-99232078-740899883499899999953124557368999999986016864111310
Q 004637 439 RGFSLEEIEEATNNFD--P-TNLIGEGS-QGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILG 514 (740)
Q Consensus 439 ~~~~~~~l~~~~~~f~--~-~~~lG~G~-~g~Vyk~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g 514 (740)
..++.+.+..+.+.+. . ..++--++ --.||+++..+|+.+++|..+.. ....+++..|...+..+....+.....
T Consensus 6 ~~L~pd~i~~al~~~g~~~~~~~~~L~s~EN~vy~v~~~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p 84 (325)
T d1zyla1 6 QTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAP 84 (325)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEECCSSSEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 6669799999999759997757232566120269998389997999984787-788999999999999998559987875
Q ss_pred EEEEECCCCCCCCCCEEEEEECCCCCCHHHH--------------CCC----CC--CCCCCCHH----------------
Q ss_conf 3353035899999726999842457640011--------------012----36--78878999----------------
Q 004637 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDY--------------LTD----WK--KKDMLKWP---------------- 558 (740)
Q Consensus 515 ~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~--------------l~~----~~--~~~~l~~~---------------- 558 (740)
... ............+.++++++|..+... +|. .. .....++.
T Consensus 85 ~~~-~g~~~~~~~~~~~~l~~~~~G~~~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~ 163 (325)
T d1zyla1 85 VAF-NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLI 163 (325)
T ss_dssp CCB-TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSS
T ss_pred EEC-CCCEEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 206-8980566534799998652776889999999999899999988630357865567789788766568999874769
Q ss_pred ------HHHHHHHHHHHHHH-HHHCCCCCCCEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf ------99999999999999-9871999980203888995111499924470589988
Q 004637 559 ------QRMAIIIGATRGVQ-FLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (740)
Q Consensus 559 ------~~~~i~~~ia~gL~-yLH~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~~ 609 (740)
.....+..+...+. +.......++||+|+.+.|||++++ ..+.||+-+.
T Consensus 164 ~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~liHgDlh~~NvL~~~~--~~~IDFdd~~ 219 (325)
T d1zyla1 164 PSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDG--PMFVDLDDAR 219 (325)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEESSS--EEECCCTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEECC--CEEEECHHCC
T ss_conf 9889899999999999999984545687120247888042878389--3588652014
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.11 E-value=1.9e-05 Score=42.57 Aligned_cols=76 Identities=12% Similarity=0.111 Sum_probs=46.0
Q ss_pred CEEECCCCCCEEEEEECC-CCEEEEEEEECC----CCC---CHHHHHHHHHHHHHCC-C--CCCCEEECEEEEECCCCCC
Q ss_conf 923207874089988349-989999995312----455---7368999999986016-8--6411131033530358999
Q 004637 457 NLIGEGSQGQLYKGFLTD-GSRVSVKCLKLK----QRH---LPQSLMQHVELLSKLR-H--RHLVSILGHCILTYQDHPN 525 (740)
Q Consensus 457 ~~lG~G~~g~Vyk~~~~~-g~~vavK~l~~~----~~~---~~~~~~~e~~~l~~l~-H--~niv~l~g~~~~~~~~~~~ 525 (740)
+.+|.|....||++...+ ++.+.||.-... ... .......|.+.++.+. + ..+.+++++.
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--------- 102 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--------- 102 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE---------
T ss_pred EEECCCCEEEEEEEEECCCCEEEEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEC---------
T ss_conf 98079852768999957998489996177130346777888778999999999986505798855289985---------
Q ss_pred CCCCEEEEEECCCCCCH
Q ss_conf 99726999842457640
Q 004637 526 TGSTVFLVLEHISNGSL 542 (740)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL 542 (740)
....++|||++++..+
T Consensus 103 -~~~~~lvmE~L~~~~~ 118 (392)
T d2pula1 103 -TEMAVTVMEDLSHLKI 118 (392)
T ss_dssp -TTTTEEEECCCTTSEE
T ss_pred -CCCCEEEEECCCCCCC
T ss_conf -9887798713577653
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.10 E-value=2e-07 Score=52.81 Aligned_cols=85 Identities=12% Similarity=0.105 Sum_probs=32.5
Q ss_pred CCCCCCEEECCCC-CCCCC----CCCCCCCCCCCCEEECCCCCCCCCCC----CCCCCCCCCCEEECCCCCCCCCC----
Q ss_conf 8977867552256-57567----89012489999878732674742269----24679999886651286074028----
Q 004637 122 KLSNLKVLSLVSL-GLWGP----LPSKINRFWSLEVLNISSNFIYGEIP----MEITSLKNLKSIVLADNLLNGSV---- 188 (740)
Q Consensus 122 ~l~~L~~L~L~~n-~l~g~----~p~~l~~l~~L~~L~Ls~N~l~g~ip----~~l~~l~~L~~L~L~~N~l~~~~---- 188 (740)
+.++|+.|+|+++ .++.. +-..+...+.|+.|+|++|.+...-. ..+...+.|+.|+|++|.++..-
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHCCHHHHHHH
T ss_conf 89998197827999989899999999976377645401201562156798875310002343300330102145999999
Q ss_pred -CCCCCCCCCCEEECCCCC
Q ss_conf -997899999899887999
Q 004637 189 -PDLQRLVLLEELNLGGND 206 (740)
Q Consensus 189 -p~~~~l~~L~~L~Ls~N~ 206 (740)
..+...+.|++|++++|.
T Consensus 93 ~~aL~~n~sL~~L~l~~n~ 111 (167)
T d1pgva_ 93 LRSTLVTQSIVEFKADNQR 111 (167)
T ss_dssp HHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHCCCCCEEECCCCC
T ss_conf 9999848938987788776
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.09 E-value=7.3e-05 Score=39.57 Aligned_cols=165 Identities=11% Similarity=0.040 Sum_probs=82.5
Q ss_pred CCHHHHHHHHCCCCCCCEEE-----CCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECE
Q ss_conf 89989999844999999232-----0787408998834998999999531245573689999999860168641113103
Q 004637 441 FSLEEIEEATNNFDPTNLIG-----EGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515 (740)
Q Consensus 441 ~~~~~l~~~~~~f~~~~~lG-----~G~~g~Vyk~~~~~g~~vavK~l~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~ 515 (740)
.+.++++...+.|...++.. .|---+.|+.+..+|+ +++|+..... ...++..|++++..+....+.-..-.
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi 79 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 79 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCCC-EEEEECCCCC--CHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 89999999998679998568523788852673899978972-8999807899--98899999999875430255545564
Q ss_pred EEEECCCCCCCCCCEEEEEECCCCCCHHHHC--------------CCC----C---CCCCC-----------------CH
Q ss_conf 3530358999997269998424576400110--------------123----6---78878-----------------99
Q 004637 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYL--------------TDW----K---KKDML-----------------KW 557 (740)
Q Consensus 516 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l--------------~~~----~---~~~~l-----------------~~ 557 (740)
-.........-......++.+..+......- +.. . ..... ..
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
T d2ppqa1 80 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 159 (316)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred EECCCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHCC
T ss_conf 10489762134125502453114655333204678888899876454443202453101110120024567777653114
Q ss_pred HHHHHHHHHHHHHHHHHH-CCCCCCCEECCCCCCCEEECCCCCEEEECCCCC
Q ss_conf 999999999999999987-199998020388899511149992447058998
Q 004637 558 PQRMAIIIGATRGVQFLH-TGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (740)
Q Consensus 558 ~~~~~i~~~ia~gL~yLH-~~~~~~iiHrDlk~~NILld~~~~~kl~DFGl~ 608 (740)
......+......+.-.+ .....++||+|+.+.||+++.+...-+.||+.+
T Consensus 160 ~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~ 211 (316)
T d2ppqa1 160 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFA 211 (316)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCC
T ss_conf 1279999999876420485545450333786365640204541267422212
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.98 E-value=2.6e-06 Score=47.04 Aligned_cols=10 Identities=30% Similarity=0.391 Sum_probs=4.0
Q ss_pred CCCCEEECCC
Q ss_conf 9998787326
Q 004637 148 WSLEVLNISS 157 (740)
Q Consensus 148 ~~L~~L~Ls~ 157 (740)
+.|+.|+|++
T Consensus 15 ~~L~~L~L~~ 24 (167)
T d1pgva_ 15 TDLKEVNINN 24 (167)
T ss_dssp SSCCEEECTT
T ss_pred CCCCEEEECC
T ss_conf 9981978279
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.72 E-value=0.00024 Score=36.83 Aligned_cols=73 Identities=15% Similarity=0.111 Sum_probs=45.4
Q ss_pred CEEECCCCCCEEEEEECCC--------CEEEEEEEECCCCCCHHHHHHHHHHHHHCC-CCCCCEEECEEEEECCCCCCCC
Q ss_conf 9232078740899883499--------899999953124557368999999986016-8641113103353035899999
Q 004637 457 NLIGEGSQGQLYKGFLTDG--------SRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTG 527 (740)
Q Consensus 457 ~~lG~G~~g~Vyk~~~~~g--------~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~~~ 527 (740)
+.|+.|-.-.+|++..+++ ..|.+++.- . ........+|..+++.+. +.-..++++++-
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~-~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~---------- 115 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-N-PETESHLVAESVIFTLLSERHLGPKLYGIFS---------- 115 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-S-CCCHHHHHHHHHHHHHHHHTTSSSCEEEEET----------
T ss_pred EECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECC-C-CCHHHHHHHHHHHHHHHHHCCCCCEEEEECC----------
T ss_conf 991785334348999688775445789817999659-9-6116589999999999975799980899818----------
Q ss_pred CCEEEEEECCCCCCHH
Q ss_conf 7269998424576400
Q 004637 528 STVFLVLEHISNGSLR 543 (740)
Q Consensus 528 ~~~~lv~Ey~~~GsL~ 543 (740)
-.+|+||+++..+.
T Consensus 116 --~g~I~efi~g~~l~ 129 (395)
T d1nw1a_ 116 --GGRLEEYIPSRPLS 129 (395)
T ss_dssp --TEEEECCCCEEECC
T ss_pred --CCEEEEEECCCCCC
T ss_conf --95699973455488
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.52 E-value=3.7e-06 Score=46.28 Aligned_cols=41 Identities=10% Similarity=0.076 Sum_probs=15.7
Q ss_pred CCCCCCCEEECCC-CCCCCC----CCCCCCCCCCCCEEECCCCCCC
Q ss_conf 1897786755225-657567----8901248999987873267474
Q 004637 121 TKLSNLKVLSLVS-LGLWGP----LPSKINRFWSLEVLNISSNFIY 161 (740)
Q Consensus 121 ~~l~~L~~L~L~~-n~l~g~----~p~~l~~l~~L~~L~Ls~N~l~ 161 (740)
.+.+.|+.|+|++ +.++.. +-..+...+.|+.|++++|.+.
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~ 59 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 59 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCC
T ss_conf 5599986887689999898999999988841982574301589611
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.42 E-value=6.1e-06 Score=45.14 Aligned_cols=13 Identities=8% Similarity=-0.118 Sum_probs=5.1
Q ss_pred CCCCCCEEECCCC
Q ss_conf 9999998983276
Q 004637 286 CSAKLNFVEISHN 298 (740)
Q Consensus 286 ~~~~L~~l~ls~N 298 (740)
..++|+.|+++.+
T Consensus 130 ~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 130 KNTTLLKFGYHFT 142 (166)
T ss_dssp HCSSCCEEECCCS
T ss_pred HCCCCCEEECCCC
T ss_conf 4998478858189
|