Citrus Sinensis ID: 004657

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------74

METPQEPSDNANDDVVSDESSPETDATLSPSQIETQAETDELQNATETNTALEAPVSDSLDDSSDPIPEDQQPQNPNPSEPGPPPRKRRRRKRFFTEINGNPSLARNRRPRFSCLAKEVDTEALIAISVGFPVDSLTEEEIEANVVSKIGGTEQANYIVVRNHILSLWRSNVSVWLTREQALESIRSEHKTLVDSAYDFLLEHGYINFGLAPPIKEVKLGSFGRVERGNVVIVGAGLAGLVAARQLISMGFKVVVLEGRERPGGRVKTRKMKCDGVVAAADVGGSVLTGINGNPLGVLARQLELPLHKVRDICPLYLPNGKAIDADIDSGVEVSFNKLLDRVCKLRHDMIEEFKSVDVPLGVALEAFRNVYKVAEDLQERMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNEWFVRALAEDLPIFYQRTVQSIRYGVDGVMVYAGGQEFRGDMVLCTVPLGVLKKGTIEFVPELPQRKKDAIQRLGYGLLNKVAMLFPHNFWGGEIDTFGHLTEDSSMRDPVQAICTRWGKDRFSYGSYSYVAVGSSGDDYDILAETVGDGRVFFAGEATNKQYPATMHGAFLSGMREAASILRVAKRRSLALTNKAYNESEDNGNLDKLFETPDLTFGSFSALFDPKSIDLESDALLRVKFQGENFDSGHLCLYGLVTRKQAVQLRELDGDGNRMKMLHDNFRVKLVARRGVCNATESLITRIKATRFSLNDGV

ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHcccEEEEEcccccccccCEEEEcccccEEEEEcccccEEEcccccHHHHHHHHcccccEEEcccccEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccHHHccccccccccccccccEEcccccHHHHHHHHHcccccccccEEEEEEccccEEEEEcccEEEEEEEEEEccccccccccEEEcccccHHHHHHHHHcccccccEEEEEccccccccccccccccccccccccccccHHcccccccccccccccccccccccHHHHHccccccccEEEECccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEccccccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccc

*****************************************************************************************************************CLAKEVDTEALIAISVGFPVDSLTEEEIEANVVSKIGGTEQANYIVVRNHILSLWRSNVSVWLTREQALESIRSEHKTLVDSAYDFLLEHGYINFGLAPPIKEVKLGSFGRVERGNVVIVGAGLAGLVAARQLISMGFKVVVLEGRERPGGRVKTRKMKCDGVVAAADVGGSVLTGINGNPLGVLARQLELPLHKVRDICPLYLPNGKAIDADIDSGVEVSFNKLLDRVCKLRHDMIEEFKSVDVPLGVALEAFRNVYKVAEDLQERMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNEWFVRALAEDLPIFYQRTVQSIRYGVDGVMVYAGGQEFRGDMVLCTVPLGVLKKGTIEFVPELPQRKKDAIQRLGYGLLNKVAMLFPHNFWGGEIDTFGHLTEDSSMRDPVQAICTRWGKDRFSYGSYSYVAVGSSGDDYDILAETVGDGRVFFAGEATNKQYPATMHGAFLSGMREAASILRVAKRRSLALTN***********LDKLFETPDLTFGSFSALFDPKSIDLESDALLRVKFQGENFDSGHLCLYGLVTRKQAVQLRELDGDGNRMKMLHDNFRVKLVARRGVCNATESLITRIKATRF******

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Lysine-specific histone demethylase 1 homolog 1	Probable histone demethylase that reduces the levels of histone H3 'Lys-4' methylation in chromatin of the floral repressor FLOWERING LOCUS C (FLC) and the sporophytically silenced floral repressor FWA. Seems to act in partial redundancy with FLOWERING LOCUS D (FLD) to repress FLC expression. Required for cytosine methylation of FWA.	probable	Q8VXV7

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1S3E, chain A
Confidence level:confident
Coverage over the Query: 226-640
View the alignment between query and template
View the model in PyMOL

Template: 2XAG, chain A
Confidence level:confident
Coverage over the Query: 335-608
View the alignment between query and template
View the model in PyMOL