Citrus Sinensis ID: 004768

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730--
MHPCPSASHLLHSLMMDFQSSSEFNDAPQMLPPPPGTFVDREELIQHVGDFAVSQGYVVTIKQSKRDRVVVLGCDRGGVYRNRRKPVDESSAESLRRRKTGSRLTNCPFEAVGKKDDGLWKLSIKNGAHNHEPLKDLSEHPSARRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQGNVTVRNFKSLRPQKTAVRNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVETPTSNSNGESLQLLNS
ccccccHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHccccccEEEEEEccccccEEEEEcccccccccccccccccHHHHHHHHHcccccccccccccccccccEEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEccccccEEEccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccHHHHcccccccccccccEEEEEcccCEEEEEcccccccHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHcccccccEEECcccHHHHHHHcccccccEEEEEccHHHHHHHHHHHHcccccccccccccccEEEcccccHHHHHHHHHHHHcccccccccccEEEEEEccccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEccccccccccccccEEccccccccccccccccccccccEEEEEEcccHHHHHHHHHccccccEEEEcccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEccEEEEEcccccccccccccccccccccccccc
********HLLHSLM*********************TFVDREELIQHVGDFAVSQGYVVTIKQSKRDRVVVLGCDRGGVYR************************NCPFEAVGKKDDGLWKLSIKNGAH*********************VLLIK****************************HVYNVKAKLRQ*************************************VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGN*ET***************
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MHPCPSASHLLHSLMMDFQSSSEFNDAPQMLPPPPGTFVDREELIQHVGDFAVSQGYVVTIKQSKRDRVVVLGCDRGGVYRNRRKPVDESSAESLRRRKTGSRLTNCPFEAVGKKDDGLWKLSIKNGAHNHEPLKDLSEHPSARRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQGNVTVRNFKSLRPQKTAVRNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVETPTSNSNGESLQLLNS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.probableQ7KW39
Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.probableQ9EQ20
Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.probableQ29HB2

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.2.-.-Acting on the aldehyde or oxo group of donors.probable
1.2.1.-With NAD(+) or NADP(+) as acceptor.probable
1.2.1.27Methylmalonate-semialdehyde dehydrogenase (acylating).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4E4G, chain A
Confidence level:very confident
Coverage over the Query: 230-710
View the alignment between query and template
View the model in PyMOL
Template: 2RPR, chain A
Confidence level:probable
Coverage over the Query: 55-79,105-134
View the alignment between query and template
View the model in PyMOL
Template: 3U5C, chain N
Confidence level:probable
Coverage over the Query: 145-191
View the alignment between query and template
View the model in PyMOL